Citrus Sinensis ID: 023555

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL
Secondary Structure (PSIPRED)
ccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHccHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHccHccccccEEEEEccccccccccccccc
Coil and Loop (DISEMBL)
masqvsdcldlepwcqldnkvvmvtgassglgrEFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALvnnagvsgavkspldltEEEWNHIMKTNLTGSWLVSKYVCIRMrdanqegsviNISSIaatsrgqlpggvayASSKAGLNAMTKCLSLElgvhkirvnsicpglfkseiteglmkkdwlnnvasrtyplrdfgttdpALTSLVRYLVhdsseyvsgnifivdsgatlpglpifssl
Flexible Loop (DISEMBL)
masqvsdcldlepwcqldNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEinkqsgssvraMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSiaatsrgqlPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRtyplrdfgttdPALTSLVRYLVHDSSEYVSGNIFIVDsgatlpglpifssl
Low Complexity Region (SEG)
MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL
Disordered region (IsUnstruct)
******DCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN******VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI****
Disordered Region (DISOPRED)
************PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL
Disordered Region (DISEMBL)
********LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL
Disordered Region (DISPRO)
***QVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRxxxxxxxxxxxxxxxxxxxxxSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
P51831	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.842	0.959	0.325	3e-28
Q9X248	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.867	0.987	0.325	2e-27
P40288	261	Glucose 1-dehydrogenase O	no	no	0.885	0.950	0.328	2e-27
P0A2D1	263	Oxidoreductase UcpA OS=Sa	yes	no	0.882	0.939	0.329	2e-27
P0A2D2	263	Oxidoreductase UcpA OS=Sa	N/A	no	0.882	0.939	0.329	2e-27
P80869	258	Glucose 1-dehydrogenase 2	no	no	0.889	0.965	0.315	7e-27
P07999	262	Glucose 1-dehydrogenase B	no	no	0.889	0.950	0.332	9e-27
P39482	261	Glucose 1-dehydrogenase 1	no	no	0.885	0.950	0.320	2e-26
Q8CPI3	244	3-oxoacyl-[acyl-carrier-p	no	no	0.846	0.971	0.320	7e-26
Q5HPW0	244	3-oxoacyl-[acyl-carrier-p	no	no	0.846	0.971	0.320	7e-26

>sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3

 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 141/264 (53%), Gaps = 28/264 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA--------AARRVDRLKSLCDEINKQSG 68
           L++K  +VTGAS G+GR   LDLAK+G  +V         A   VD +KS+         
Sbjct: 2   LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGR------- 54

Query: 69  SSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
              +A+AV+ DVS N   ++N +++    F  ID LVNNAG++      + + E+EW+ +
Sbjct: 55  ---KAIAVKADVS-NPEDVQNMIKETLSVFSTIDILVNNAGITRD-NLIMRMKEDEWDDV 109

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           +  NL G +  +K V  +M    + G +IN+SSI   S    PG   Y ++KAG+  +TK
Sbjct: 110 ININLKGVFNCTKAVTRQMM-KQRSGRIINVSSIVGVSGN--PGQANYVAAKAGVIGLTK 166

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLV 247
             + EL    I VN+I PG   +++T+ L K   + +   +  PL  FG  +P+ ++S+V
Sbjct: 167 SSAKELASRNITVNAIAPGFISTDMTDKLAKD--VQDEMLKQIPLARFG--EPSDVSSVV 222

Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            +L  + + Y++G    +D G  +
Sbjct: 223 TFLASEGARYMTGQTLHIDGGMVM 246

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.
Bacillus subtilis (strain 168) (taxid: 224308)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0EC: 0

>sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 137/258 (53%), Gaps = 15/258 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L+ KV ++TGA+SG+G+   L  A+ G  ++A     + L SL  E     G   +   
Sbjct: 2   RLEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPG---KVDP 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNL 133
             L+V+ +   I+  V+K  + +GRID LVNNAG++   +  L   + EE+W+ ++  NL
Sbjct: 59  YVLNVT-DRDQIKEVVEKVVQKYGRIDVLVNNAGIT---RDALLVRMKEEDWDAVINVNL 114

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G + V++ V   M    + GS++N+SS+        PG   YA+SKAG+  MTK  + E
Sbjct: 115 KGVFNVTQMVVPYMIK-QRNGSIVNVSSVVGIYGN--PGQTNYAASKAGVIGMTKTWAKE 171

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           L    IRVN++ PG  ++ +TE L +K      A    PL  FG  +  +  ++ +L  D
Sbjct: 172 LAGRNIRVNAVAPGFIETPMTEKLPEK--ARETALSRIPLGRFGKPE-EVAQVILFLASD 228

Query: 254 SSEYVSGNIFIVDSGATL 271
            S YV+G +  +D G  +
Sbjct: 229 ESSYVTGQVIGIDGGLVI 246

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P40288|DHG_BACME Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 139/259 (53%), Gaps = 11/259 (4%)

Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVR 72
           +  L+ KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K  G    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---E 58

Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV+ DV+     I N VQ A + FG++D ++NNAG+   V S  +++  +WN ++ TN
Sbjct: 59  AIAVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTN 116

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MT+ L+L
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLAL 174

Query: 193 ELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           E     IRVN+I PG   + I  E     +   +V S   P+   G  +  + ++  +L 
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI-PMGYIGEPE-EIAAVAAWLA 232

Query: 252 HDSSEYVSGNIFIVDSGAT 270
              + YV+G     D G T
Sbjct: 233 SSEASYVTGITLFADGGMT 251

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P0A2D1|UCPA_SALTY Oxidoreductase UcpA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ucpA PE=3 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 140/264 (53%), Gaps = 17/264 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K  ++TGAS G+G       A+ G  ++      D ++ L DE+    G   R  A
Sbjct: 3   KLTGKTALITGASQGIGEGIARVFARHGANLILLDIS-DEIEKLADELG---GRGHRCTA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DV  + A+++ +V +A E  GRID LVNNAGV   + + LD++EE+ +  +  N+ G
Sbjct: 59  VKADVR-DFASVQAAVARAKETEGRIDILVNNAGVC-RLGNFLDMSEEDRDFHIDINIKG 116

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            W V+K V   M    ++G ++ +SS+        PG  AYA SKA +  +TK L++E  
Sbjct: 117 VWNVTKAVLPEMIK-RKDGRIVMMSSVTGDMVAD-PGETAYALSKAAIVGLTKSLAVEYA 174

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS------RTYPLRDFGTTDP-ALTSLVR 248
              IRVN+ICPG  ++ + E + ++   ++  S      +  PLR     DP  +  L  
Sbjct: 175 QSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRL--ADPLEVGELAA 232

Query: 249 YLVHDSSEYVSGNIFIVDSGATLP 272
           +L  D S Y++G   ++D G+TLP
Sbjct: 233 FLASDESSYLTGTQNVIDGGSTLP 256

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P0A2D2|UCPA_SALTI Oxidoreductase UcpA OS=Salmonella typhi GN=ucpA PE=3 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 140/264 (53%), Gaps = 17/264 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K  ++TGAS G+G       A+ G  ++      D ++ L DE+    G   R  A
Sbjct: 3   KLTGKTALITGASQGIGEGIARVFARHGANLILLDIS-DEIEKLADELG---GRGHRCTA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DV  + A+++ +V +A E  GRID LVNNAGV   + + LD++EE+ +  +  N+ G
Sbjct: 59  VKADVR-DFASVQAAVARAKETEGRIDILVNNAGVC-RLGNFLDMSEEDRDFHIDINIKG 116

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            W V+K V   M    ++G ++ +SS+        PG  AYA SKA +  +TK L++E  
Sbjct: 117 VWNVTKAVLPEMIK-RKDGRIVMMSSVTGDMVAD-PGETAYALSKAAIVGLTKSLAVEYA 174

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS------RTYPLRDFGTTDP-ALTSLVR 248
              IRVN+ICPG  ++ + E + ++   ++  S      +  PLR     DP  +  L  
Sbjct: 175 QSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRL--ADPLEVGELAA 232

Query: 249 YLVHDSSEYVSGNIFIVDSGATLP 272
           +L  D S Y++G   ++D G+TLP
Sbjct: 233 FLASDESSYLTGTQNVIDGGSTLP 256

Salmonella typhi (taxid: 90370)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P80869|DHG2_BACSU Glucose 1-dehydrogenase 2 OS=Bacillus subtilis (strain 168) GN=ycdF PE=1 SV=2

 Score =  121 bits (303), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 11/260 (4%)

Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L  K  +VTG+S G+G+       K    +V              EI KQ+G   +A
Sbjct: 2   YKDLTGKTAIVTGSSKGIGKAIAERFGKEKMNVVVNYHSDPSGADETLEIIKQNGG--KA 59

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
           ++VE DVS     I+  +  A E FG +D +VNN+G +G    P +++ E+W  ++  N+
Sbjct: 60  VSVEADVSKE-EGIQALLDTALEHFGTLDVMVNNSGFNGVEAMPHEMSLEDWQRVIDVNV 118

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG--GVAYASSKAGLNAMTKCLS 191
           TG++L +K     M   N +G+V+NISS+      Q+P    V Y++SK G+  MT+ L+
Sbjct: 119 TGTFLGAKAALNHMMKNNIKGNVLNISSV----HQQIPRPVNVQYSTSKGGIKMMTETLA 174

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           L      IRVN+I PG   +E +    KK+       +  P++ FG  +  + +   +LV
Sbjct: 175 LNYADKGIRVNAIAPGTIATE-SNVDTKKEESRQKQLKKIPMKAFGKPE-EVAAAAAWLV 232

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            + + YV+G    VD G TL
Sbjct: 233 SEEASYVTGATLFVDGGMTL 252

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P07999|DHGB_BACME Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2

 Score =  120 bits (302), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 139/259 (53%), Gaps = 10/259 (3%)

Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVR 72
           +  L+ KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +E  K+ G    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGG--E 59

Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV+ DV+     I N VQ A + FG++D ++NNAG+   V S  +++  +WN ++ TN
Sbjct: 60  AIAVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGMENPVSSH-EMSLSDWNKVIDTN 117

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MT+ L+L
Sbjct: 118 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEW-KIPWPLFVHYAASKGGMKLMTETLAL 176

Query: 193 ELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           E     IRVN+I PG   + I  E     +   +V S   P+   G  +P   + V +L 
Sbjct: 177 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI-PMGYIG--EPEEIAAVAWLA 233

Query: 252 HDSSEYVSGNIFIVDSGAT 270
              + YV+G     D G T
Sbjct: 234 SSEASYVTGITLFADGGMT 252

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P39482|DHG1_BACME Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 139/259 (53%), Gaps = 11/259 (4%)

Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVR 72
           +  L+ KVV++TG+S+GLG+   +  A    ++V   R + +   S+ +EI K  G    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKAMAIRFATEKAKVVVNYRSKEEEANSVLEEIKKVGG---E 58

Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV+ DV+     I N VQ + + FG++D ++NNAG+   V S  +++  +WN ++ TN
Sbjct: 59  AIAVKGDVTVESDVI-NLVQSSIKEFGKLDVMINNAGMENPVSS-HEMSLSDWNKVIDTN 116

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MT+ L+L
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLAL 174

Query: 193 ELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           E     IRVN+I PG   + I  E     +   +V S   P+   G  +  + ++  +L 
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI-PMGYIGEPE-EIAAVAAWLA 232

Query: 252 HDSSEYVSGNIFIVDSGAT 270
              + YV+G     D G T
Sbjct: 233 SSEASYVTGITLFADGGMT 251

May play some role in spore germination.

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1

 Score =  117 bits (294), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 135/253 (53%), Gaps = 16/253 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           NK  +VTGAS G+GR   L LA+ G  + V  A   D+ +++ +EI  +    V + A++
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKG---VESFAIQ 58

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLTG 135
            +V A G  ++  +++    FG +D LVNNAG++   K  L   + E+EW+ ++ TNL G
Sbjct: 59  ANV-AKGDEVKEMIKEVVSQFGSVDVLVNNAGIT---KDNLLMRMKEQEWDDVIDTNLKG 114

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +   + V  +M    + G++IN++SI        PG   Y ++KAG+  +TK  + EL 
Sbjct: 115 VFNCIQKVTPQML-RQRSGAIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELA 171

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              I VN++ PG   S++T  L   D L +      PL+ FG  D  + + V +L  D +
Sbjct: 172 SRGITVNAVAPGFIVSDMTNAL--SDDLKDQMLEQIPLKRFG-EDTDIANTVAFLASDKA 228

Query: 256 EYVSGNIFIVDSG 268
           +Y++G    V+ G
Sbjct: 229 KYITGQTIHVNGG 241

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1

 Score =  117 bits (294), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 135/253 (53%), Gaps = 16/253 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           NK  +VTGAS G+GR   L LA+ G  + V  A   D+ +++ +EI  +    V + A++
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKG---VESFAIQ 58

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLTG 135
            +V A G  ++  +++    FG +D LVNNAG++   K  L   + E+EW+ ++ TNL G
Sbjct: 59  ANV-AKGDEVKEMIKEVVSQFGSVDVLVNNAGIT---KDNLLMRMKEQEWDDVIDTNLKG 114

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +   + V  +M    + G++IN++SI        PG   Y ++KAG+  +TK  + EL 
Sbjct: 115 VFNCIQKVTPQML-RQRSGAIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELA 171

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              I VN++ PG   S++T  L   D L +      PL+ FG  D  + + V +L  D +
Sbjct: 172 SRGITVNAVAPGFIVSDMTNAL--SDDLKDQMLEQIPLKRFG-EDTDIANTVAFLASDKA 228

Query: 256 EYVSGNIFIVDSG 268
           +Y++G    V+ G
Sbjct: 229 KYITGQTIHVNGG 241

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
255552543	285	2,4-dienoyl-CoA reductase, putative [Ric	0.964	0.947	0.772	1e-122
147788942	286	hypothetical protein VITISV_036158 [Viti	0.992	0.972	0.732	1e-118
356500313	282	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	0.992	0.985	0.725	1e-118
388521159	273	unknown [Medicago truncatula]	0.964	0.989	0.730	1e-115
118484228	290	unknown [Populus trichocarpa]	0.964	0.931	0.709	1e-115
224139712	290	predicted protein [Populus trichocarpa]	0.964	0.931	0.709	1e-115
13549123	283	putative short-chain type alcohol dehydr	1.0	0.989	0.703	1e-111
23451057	290	putative short-chain type alcohol dehydr	1.0	0.965	0.675	1e-111
356500296	282	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	0.964	0.957	0.699	1e-110
239736371	308	2,4-dienoyl-CoA reductase [Jatropha curc	0.967	0.879	0.671	1e-109

>gi|255552543|ref|XP_002517315.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223543578|gb|EEF45108.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/273 (77%), Positives = 243/273 (89%), Gaps = 3/273 (1%)

Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK---QS 67
           LEPWC LDNKVV+VTGAS+GLGREFCLDLAKAGC+I+AAARR+DRLKSLCDEIN+     
Sbjct: 13  LEPWCDLDNKVVLVTGASAGLGREFCLDLAKAGCKILAAARRIDRLKSLCDEINQLPNTP 72

Query: 68  GSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNH 127
           G+  RA+A+ELDV A+G  I+ SVQ AW+AFGRIDALVNNAGV G VK+PLDL+EEEW  
Sbjct: 73  GAGPRAVAIELDVCADGPTIDKSVQIAWDAFGRIDALVNNAGVRGNVKTPLDLSEEEWEL 132

Query: 128 IMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
           ++KTNL GSW+VSKYVCIRMRDA   GS++NISSIA  +RGQLPG VAYASSKAGLNA+T
Sbjct: 133 VVKTNLKGSWIVSKYVCIRMRDAKLGGSIVNISSIAGLNRGQLPGAVAYASSKAGLNALT 192

Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           K ++LELGVH IRVNSI PGLFKSEITEGLM+KDWL N+A RT PLR++GT+DPALTSLV
Sbjct: 193 KVMALELGVHNIRVNSISPGLFKSEITEGLMQKDWLRNIALRTVPLREYGTSDPALTSLV 252

Query: 248 RYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
           RYL+HDSSEYVSGNIF+VD+GATLPG+PIFSSL
Sbjct: 253 RYLIHDSSEYVSGNIFVVDAGATLPGVPIFSSL 285

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147788942|emb|CAN64848.1| hypothetical protein VITISV_036158 [Vitis vinifera]

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/288 (73%), Positives = 247/288 (85%), Gaps = 10/288 (3%)

Query: 1   MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 60
           MASQV++   LEPW  L+ KVVMVTGASSGLG EFCL+LAKAGC+IVAAARRVDRLKSLC
Sbjct: 1   MASQVAN--HLEPWQDLEGKVVMVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLC 58

Query: 61  DEINKQSGSSV--------RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSG 112
           DEIN  + S++        RA+AVELDV+++G++I  SVQKAWEAFGRIDAL+NNAG+ G
Sbjct: 59  DEINNLTHSNLPPNDDPPLRAVAVELDVTSDGSSIGASVQKAWEAFGRIDALLNNAGIRG 118

Query: 113 AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG 172
            V SPLD++EEEWN+ +KTNLTGSWLVSKYV +RMRDA   GS+INISSIAA +RGQLPG
Sbjct: 119 NVNSPLDISEEEWNNTLKTNLTGSWLVSKYVGLRMRDAKNGGSIINISSIAALNRGQLPG 178

Query: 173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYP 232
           GVAY SSK+GL+AMTK ++LELG + IR N+I PGLFKSEIT GLM+KDWLN VA RT P
Sbjct: 179 GVAYVSSKSGLSAMTKVMALELGAYNIRANAIAPGLFKSEITSGLMQKDWLNTVAQRTCP 238

Query: 233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
           +R FGT+DPALTSLVRYL+HDSS Y+SGNIFIVD+GATLPG+PIFSSL
Sbjct: 239 MRTFGTSDPALTSLVRYLIHDSSRYISGNIFIVDAGATLPGVPIFSSL 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500313|ref|XP_003518977.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like [Glycine max]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/284 (72%), Positives = 243/284 (85%), Gaps = 6/284 (2%)

Query: 1   MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 60
           MA+Q+SD   LEPW  L  KVVMVTGASSGLGR+FCLDL +AGCR+V AARRVDRL+SLC
Sbjct: 1   MATQLSD--RLEPWHTLAGKVVMVTGASSGLGRDFCLDLGRAGCRVVVAARRVDRLESLC 58

Query: 61  DEINKQS----GSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKS 116
           DEIN  +    G S RA+AVELDV+A+  A++  VQKAWEAFG IDAL+NNAGV G VKS
Sbjct: 59  DEINSMAAGDGGRSRRAVAVELDVAADDPAVDKYVQKAWEAFGHIDALINNAGVRGNVKS 118

Query: 117 PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY 176
           PL+L+EEEWNH  +TNLTG+WLVSKYVC RMRDA ++GS+INI+SIA  +RGQLPGG AY
Sbjct: 119 PLELSEEEWNHAFRTNLTGTWLVSKYVCKRMRDAQRKGSIINIASIAGLNRGQLPGGAAY 178

Query: 177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDF 236
           +SSKAG+N +T+ ++LELG HKIRVNSI PGLFKSEITE LM+K+WLNNVA +T PLR F
Sbjct: 179 SSSKAGVNMLTRVMALELGAHKIRVNSISPGLFKSEITEKLMEKNWLNNVAMKTVPLRKF 238

Query: 237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
           GT+DPALTSL RYL+HDSSEYVSGN F+VD+GATLPG+PI+SSL
Sbjct: 239 GTSDPALTSLARYLIHDSSEYVSGNNFVVDAGATLPGVPIYSSL 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class: N/A

Phylum: Streptophyta

>gi|388521159|gb|AFK48641.1| unknown [Medicago truncatula]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/271 (73%), Positives = 235/271 (86%), Gaps = 1/271 (0%)

Query: 10  DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS 69
            LEPW  L  KVV+VTGAS+G+GR+FCLDLA+AGC ++AAARRVDRL+SLCDEIN + G 
Sbjct: 4   QLEPWHHLAGKVVLVTGASAGIGRDFCLDLARAGCFVIAAARRVDRLQSLCDEINGKDGR 63

Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
            +RA+AVELDV+A+G AIE  VQKAWEAFG IDAL+NNAGV G V SPL+LTEEEWN++ 
Sbjct: 64  -LRAVAVELDVAADGGAIEKYVQKAWEAFGHIDALINNAGVRGNVSSPLELTEEEWNNVF 122

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           KTN+TG+WLVSKYVC  MRD+ ++GS+INISSIA   RGQLPGG AYA SKAG+N +TK 
Sbjct: 123 KTNITGTWLVSKYVCKLMRDSKRKGSIINISSIAGLERGQLPGGTAYACSKAGVNMLTKV 182

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           ++LELG +KIRVNSI PGLFKSEITE LMKKDWLNNVA RT PLR++GT++PALTS+ RY
Sbjct: 183 MALELGAYKIRVNSISPGLFKSEITESLMKKDWLNNVAIRTVPLREWGTSNPALTSIARY 242

Query: 250 LVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
           L+HDSSEYV+GNIFI D+GATLPG PI+SSL
Sbjct: 243 LIHDSSEYVTGNIFIADAGATLPGFPIYSSL 273

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484228|gb|ABK93994.1| unknown [Populus trichocarpa]

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/282 (70%), Positives = 238/282 (84%), Gaps = 12/282 (4%)

Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS- 69
           LEPWC L NKVV+VTGASSGLG++FCLDLAKAGCRI+AAARRVDRLKSLCDEIN+ S S 
Sbjct: 9   LEPWCDLRNKVVLVTGASSGLGKDFCLDLAKAGCRILAAARRVDRLKSLCDEINQMSLSF 68

Query: 70  -----------SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL 118
                        RA+AVELDVSA+G  I+  VQKAW+AFG IDALVNNAGV G V+ PL
Sbjct: 69  PTSSSTAEVDIQPRAVAVELDVSADGNTIDKCVQKAWDAFGGIDALVNNAGVRGTVRDPL 128

Query: 119 DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS 178
           +L+EEEWNH+++TN TG+WLVSK VCIRMRD+ + GSVINI+SIA  +RGQLPGG+ Y +
Sbjct: 129 ELSEEEWNHVIRTNTTGTWLVSKAVCIRMRDSKRGGSVINIASIAGLNRGQLPGGIHYVA 188

Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT 238
           SK G+NA++K +++ELG +KIRVNSI PGLFKSEIT+GLM+KDWL+NVA +T PLR FGT
Sbjct: 189 SKTGVNAISKVMAMELGAYKIRVNSISPGLFKSEITQGLMQKDWLSNVALKTVPLRTFGT 248

Query: 239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
            DPALTSL RYL+HDSSEYV+GN FIVD+GATLPG+P+FSSL
Sbjct: 249 ADPALTSLARYLIHDSSEYVTGNNFIVDAGATLPGVPLFSSL 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139712|ref|XP_002323240.1| predicted protein [Populus trichocarpa] gi|222867870|gb|EEF05001.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/282 (70%), Positives = 238/282 (84%), Gaps = 12/282 (4%)

Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS- 69
           LEPWC L NKVV+VTGASSGLG++FCLDLAKAGCRI+AAARRVDRLKSLCDEIN+ S S 
Sbjct: 9   LEPWCDLRNKVVLVTGASSGLGKDFCLDLAKAGCRILAAARRVDRLKSLCDEINQMSLSF 68

Query: 70  -----------SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL 118
                        RA+AVELDVSA+G  I+  VQKAW+AFG IDALVNNAGV G V+ PL
Sbjct: 69  PTSSSTAEVDIQPRAVAVELDVSADGNTIDKCVQKAWDAFGGIDALVNNAGVRGTVRDPL 128

Query: 119 DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS 178
           +L+EEEWNH+++TN TG+WLVSK VCIRMRD+ + GSVINI+SIA  +RGQLPGG+ Y +
Sbjct: 129 ELSEEEWNHVIRTNTTGTWLVSKAVCIRMRDSKRGGSVINIASIAGLNRGQLPGGIHYVA 188

Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT 238
           SK G+NA++K +++ELG +KIRVNSI PGLFKSEIT+GLM+KDWL+NVA +T PLR FGT
Sbjct: 189 SKTGVNAISKVMAMELGAYKIRVNSISPGLFKSEITQGLMQKDWLSNVALKTVPLRTFGT 248

Query: 239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
            DPALTSL RYL+HDSSEYV+GN FIVD+GATLPG+P+FSSL
Sbjct: 249 ADPALTSLARYLIHDSSEYVTGNNFIVDAGATLPGVPLFSSL 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13549123|gb|AAK29646.1|AF349916_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/283 (70%), Positives = 234/283 (82%), Gaps = 3/283 (1%)

Query: 1   MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 60
           M         LEPW +L  KVVMVTGASSG+GR+FC DL+KAGCRI+AAARR+DRL+SLC
Sbjct: 1   MEKHAKSVRQLEPWGELAGKVVMVTGASSGIGRDFCSDLSKAGCRIIAAARRIDRLQSLC 60

Query: 61  DEINKQSG---SSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP 117
           DEIN  S      +RA+A+ELDVSANG+AIE +VQKAW+ FGRID LVNNAG+ G+V SP
Sbjct: 61  DEINSNSSNSSQDLRAVAIELDVSANGSAIEAAVQKAWDVFGRIDGLVNNAGIRGSVHSP 120

Query: 118 LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA 177
           LDL+EEEW    KTNL G+WLV+K+VC  MR ANQEGSVINISSIA  + GQLPG +AYA
Sbjct: 121 LDLSEEEWEKTYKTNLRGAWLVTKFVCKHMRAANQEGSVINISSIAGLNPGQLPGCLAYA 180

Query: 178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG 237
           SSK  LN++TK L+LELG +KIRVNSI PGLFKSEITEGL++KDWL N+  RT PLR  G
Sbjct: 181 SSKEALNSITKVLALELGPYKIRVNSISPGLFKSEITEGLIQKDWLQNIELRTIPLRTHG 240

Query: 238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
           T++PALTS+VRYL+HDSSEYVSGN+FIVD+GATLPG+PIFSSL
Sbjct: 241 TSNPALTSVVRYLIHDSSEYVSGNMFIVDAGATLPGVPIFSSL 283

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23451057|gb|AAN32641.1|AF416732_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/290 (67%), Positives = 233/290 (80%), Gaps = 10/290 (3%)

Query: 1   MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 60
           M         LEPW +L  KVVMVTGASSG+GR+FC DL+KAGCRI+AAARR+DRLKSLC
Sbjct: 1   MEKHAKSVRQLEPWGELAGKVVMVTGASSGIGRDFCSDLSKAGCRIIAAARRIDRLKSLC 60

Query: 61  DEIN----------KQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV 110
           DEIN            S   +RA+A+ELDVSANGA+IE +VQKAW AFGRID LVNNAG+
Sbjct: 61  DEINGIKLEFLIESTISSQELRAVAIELDVSANGASIEAAVQKAWNAFGRIDVLVNNAGI 120

Query: 111 SGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL 170
            G+V SPL+L+EEEW  I  TNL G+WLV+KYVCI MR ANQ G+VINISS A  +RG+L
Sbjct: 121 RGSVHSPLNLSEEEWEKIYNTNLRGAWLVTKYVCIHMRAANQGGTVINISSTAGLNRGKL 180

Query: 171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT 230
           PG +AYASSK  LN++TK +++ELG +KIRVNSI PG+FKSEITE L++KDW  NVA +T
Sbjct: 181 PGSLAYASSKDALNSITKVMAIELGPYKIRVNSISPGVFKSEITERLIQKDWFKNVALKT 240

Query: 231 YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
            PLR  GT++PALTS+VRYL+HDSSEYVSGNIFIVD+GATLPG+PIFSSL
Sbjct: 241 IPLRTHGTSNPALTSVVRYLIHDSSEYVSGNIFIVDAGATLPGVPIFSSL 290

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500296|ref|XP_003518969.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like [Glycine max]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/273 (69%), Positives = 234/273 (85%), Gaps = 3/273 (1%)

Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           LEPW +LD+KVV+VTGASSGLGR+FC+DLAKAGC +VAAARR+DRL SLC EIN +  S+
Sbjct: 10  LEPWHKLDDKVVLVTGASSGLGRDFCIDLAKAGCCVVAAARRLDRLTSLCHEINHRWPSN 69

Query: 71  V---RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNH 127
           V   RA+AVELDV+A+G AI+ +VQKAW+AFGR+D+L+NNAGV G+VKSPL L+EEEW+H
Sbjct: 70  VGIHRAVAVELDVAADGPAIDRAVQKAWDAFGRVDSLINNAGVRGSVKSPLKLSEEEWDH 129

Query: 128 IMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
           + KTNLTG WLVSKYVC RM D   +GS+INISS++  +RGQLPG  AYASSKAG+N +T
Sbjct: 130 VFKTNLTGCWLVSKYVCKRMCDIQLKGSIINISSVSGLNRGQLPGAAAYASSKAGVNMLT 189

Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           K +++ELG+HKIRVNSI PG+FKSEITE L++KDWLN+V  +  PLR  GT+DPALTSL 
Sbjct: 190 KVMAMELGMHKIRVNSISPGIFKSEITENLLQKDWLNDVVRKIMPLRRLGTSDPALTSLA 249

Query: 248 RYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
           RYL+HDSSEYV+GN FIVD G TLPG+PI+SSL
Sbjct: 250 RYLIHDSSEYVTGNNFIVDYGGTLPGVPIYSSL 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class: N/A

Phylum: Streptophyta

>gi|239736371|gb|ACS12983.1| 2,4-dienoyl-CoA reductase [Jatropha curcas]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/301 (67%), Positives = 232/301 (77%), Gaps = 30/301 (9%)

Query: 10  DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS 69
            LEPWC L NKVV++TGASSGLGR+FCLDLAK+GCRI+AAARRV RLKSLC+EIN+   S
Sbjct: 8   QLEPWCDLHNKVVLITGASSGLGRDFCLDLAKSGCRILAAARRVGRLKSLCEEINQLPSS 67

Query: 70  S-------VRAMAVELDVSANGAAIENSVQKAWEAFG----------------------R 100
           +       +RA+AVELDV  +G  I+ SVQ AWEA G                      +
Sbjct: 68  ANVKPSTGLRAVAVELDVCVDGVTIDKSVQSAWEALGESMLWLIMLVLEVFYIFCLDDEK 127

Query: 101 IDALVNNAGV-SGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI 159
                   GV SG+VK+PLDL+EEEWNH+++TNLTGSWLVSK VC+RMRDA Q GS+INI
Sbjct: 128 FPIFEKIYGVVSGSVKTPLDLSEEEWNHVIRTNLTGSWLVSKSVCLRMRDAKQGGSIINI 187

Query: 160 SSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK 219
           SSIA   RGQLPG VAYASSKAGLNAMTK ++LELGVHKIRVNSI PGLFKSEITE LM+
Sbjct: 188 SSIAGLDRGQLPGAVAYASSKAGLNAMTKVMALELGVHKIRVNSISPGLFKSEITEHLMQ 247

Query: 220 KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSS 279
           KDWL NVA +  PLR  G +DPALTSLVRYL+HDSSEYVSGNIFI+D+GATLPG+PIFSS
Sbjct: 248 KDWLTNVAKKIVPLRTHGASDPALTSLVRYLIHDSSEYVSGNIFIIDAGATLPGVPIFSS 307

Query: 280 L 280
           L
Sbjct: 308 L 308

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2100621	280	AT3G55290 [Arabidopsis thalian	0.960	0.960	0.681	1.9e-99
TAIR|locus:2075296	288	AT3G46170 [Arabidopsis thalian	0.960	0.934	0.666	1.1e-96
TAIR|locus:2100636	279	AT3G55310 [Arabidopsis thalian	0.960	0.964	0.651	3.7e-96
TAIR|locus:2031376	282	AT1G63380 [Arabidopsis thalian	0.964	0.957	0.644	1.8e-94
TAIR|locus:505006251	312	AT2G17845 [Arabidopsis thalian	0.95	0.852	0.671	2.3e-94
TIGR_CMR|GSU_1603	246	GSU_1603 "3-oxoacyl-(acyl-carr	0.853	0.971	0.342	6e-32
TAIR|locus:2078693	296	AT3G01980 [Arabidopsis thalian	0.578	0.547	0.327	6.9e-32
TIGR_CMR|BA_3989	246	BA_3989 "3-oxoacyl-(acyl-carri	0.871	0.991	0.347	7.7e-32
UNIPROTKB|G3X6L7	305	G3X6L7 "Uncharacterized protei	0.878	0.806	0.325	2.6e-31
TIGR_CMR|CHY_1186	248	CHY_1186 "oxidoreductase, shor	0.846	0.955	0.349	1.3e-29

TAIR|locus:2100621 AT3G55290 [Arabidopsis thaliana (taxid:3702)]

 Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
 Identities = 184/270 (68%), Positives = 229/270 (84%)

Query:    11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
             LEPWC+L +KVV+VTGASSG+GRE CLDLAKAGC+++AAARRVDRL SLC EIN  S + 
Sbjct:    12 LEPWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTG 71

Query:    71 VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
             ++A A+ELDVS++ A I+ +V++AW+ FG+IDAL+NNAG+ G VKS LDL+E+EW+++ K
Sbjct:    72 IQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKSSLDLSEDEWDNVFK 131

Query:   131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
             TNL G WLVSK+VC+ MRDA + GSVINISSIA   RG LPGG+AYA SK G++ M++ +
Sbjct:   132 TNLKGPWLVSKHVCMLMRDAKRGGSVINISSIAGI-RGMLPGGLAYACSKGGVDTMSRMM 190

Query:   191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
             +LELGVHKIRVNSI PGLFKSEIT+GLM+K+WL NV  RT PL+   T DP LTSLVRYL
Sbjct:   191 ALELGVHKIRVNSIAPGLFKSEITQGLMQKEWLKNVTERTVPLKVQQTVDPGLTSLVRYL 250

Query:   251 VHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
             +HDSS+Y+SGN +IVDSGATLPG+PIFSSL
Sbjct:   251 IHDSSQYISGNTYIVDSGATLPGVPIFSSL 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:2075296 AT3G46170 [Arabidopsis thaliana (taxid:3702)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 180/270 (66%), Positives = 222/270 (82%)

Query:    11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
             LEPWC+L +KVV+VTGASSG+GRE CLDL KAGC+I+A ARRVDRL SLC EIN  S + 
Sbjct:    20 LEPWCELKDKVVLVTGASSGIGREICLDLGKAGCKIIAVARRVDRLNSLCSEINSSSSTG 79

Query:    71 VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
             ++A A++LDV+++ A I+  VQ AW  FG+IDAL+NNAG+ G VKS LDL++EEW+++ K
Sbjct:    80 IQAAALKLDVTSDAATIQKVVQGAWGIFGKIDALINNAGIRGNVKSSLDLSKEEWDNVFK 139

Query:   131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
             TNLTG WLVSKYVC+ MRDA   GSVINISSIA   RG LPG +AYA SK G++ M+K +
Sbjct:   140 TNLTGPWLVSKYVCVLMRDAKLGGSVINISSIAGI-RGILPGALAYACSKIGVDTMSKMM 198

Query:   191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
             ++ELGVHKIRVNSI PG+FKSEIT+GLM+K+W  NV  RT PL+   T DP +TSLVRYL
Sbjct:   199 AVELGVHKIRVNSIAPGIFKSEITQGLMQKEWFKNVTERTVPLKLQQTVDPGITSLVRYL 258

Query:   251 VHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
             +HDSS+Y+SGN +IVDSGATLPG+PIFSSL
Sbjct:   259 IHDSSQYISGNTYIVDSGATLPGVPIFSSL 288

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2100636 AT3G55310 [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 176/270 (65%), Positives = 225/270 (83%)

Query:    11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
             LEPWC+L +KVV+VTGASSG+GRE CLDLAKAGC+++AAARRVDRL SLC EIN  S + 
Sbjct:    11 LEPWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTG 70

Query:    71 VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
             ++A A+ELDVS++ A I+ +V++AW+ FG+IDAL+NNAG+ G VK  LDL+E+EW+++  
Sbjct:    71 IQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKLSLDLSEDEWDNVFN 130

Query:   131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
             TNL G WLV+KYVC+ MRDA + GSVINISS+A   R  +PGG+AY+ SK G++ M++ +
Sbjct:   131 TNLKGPWLVAKYVCVLMRDAKRGGSVINISSVAGV-RSIVPGGLAYSCSKGGVDTMSRMM 189

Query:   191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
             ++ELGVHKIRVNSI PGLFKSEIT+ LM+K+WL NV  RT PL+   T DP LTSLVRYL
Sbjct:   190 AIELGVHKIRVNSIAPGLFKSEITQALMQKEWLKNVTERTVPLKVQQTIDPGLTSLVRYL 249

Query:   251 VHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
             +HDSS+Y+SGN +IVDSGATLPG+PIFSSL
Sbjct:   250 IHDSSQYISGNTYIVDSGATLPGVPIFSSL 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2031376 AT1G63380 [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 174/270 (64%), Positives = 218/270 (80%)

Query:    11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
             LEPWC+L +KVV+VTGASSG+GRE CLDL KAGC+IVAAARRVDRL SLC EIN      
Sbjct:    11 LEPWCELKDKVVLVTGASSGIGREICLDLCKAGCKIVAAARRVDRLNSLCSEINSFGAIG 70

Query:    71 VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
             V+A+A+ELDVS+    I  +V++AWE FG+ID L+NNAG+ G VKS LDL+EEEW+ + +
Sbjct:    71 VQAVALELDVSSEADTIRKAVKEAWETFGKIDVLINNAGIRGNVKSSLDLSEEEWDKVFR 130

Query:   131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
             TNLTGSWL+SKYVC+ MRDA + GSVIN+SSI+   RG L GG+AYA SK G++ MT+ +
Sbjct:   131 TNLTGSWLISKYVCLLMRDAERGGSVINVSSISGLHRGLLRGGLAYACSKGGVDTMTRMM 190

Query:   191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
             ++EL V+KIRVNSI PG+F+SEIT+GL +K+WL  V  +  PL+   T DP LTSLVRYL
Sbjct:   191 AIELAVYKIRVNSIAPGIFRSEITQGLFQKEWLKKVTEKVVPLKMQQTVDPGLTSLVRYL 250

Query:   251 VHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
             +HDSS+YV+GN +IVDSG TLPG+PIFSSL
Sbjct:   251 IHDSSQYVTGNTYIVDSGTTLPGVPIFSSL 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:505006251 AT2G17845 [Arabidopsis thaliana (taxid:3702)]

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 180/268 (67%), Positives = 225/268 (83%)

Query:    15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK-QSGSSVRA 73
             C+L +KVV+VTGASSG+GRE CLDLAKAGC+I+AAARRVDRLKSLC EIN+ +  + ++A
Sbjct:    45 CELKDKVVLVTGASSGIGREVCLDLAKAGCKIIAAARRVDRLKSLCSEINRFEYSAGIQA 104

Query:    74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
              A+ELDVS++ A ++ +V+KAWE FG+IDAL+NNAG  G VKS LDL+E+EW+ + KTNL
Sbjct:   105 EALELDVSSDAATVQKAVKKAWEIFGKIDALINNAGFRGNVKSSLDLSEDEWDKVFKTNL 164

Query:   134 TGSWLVSKYVCIRMRDANQEG-SVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
             TG+WLVSKYVCI MRDA + G SVINISS++   RGQ+PGGVAYA SK G++ MT+ ++L
Sbjct:   165 TGTWLVSKYVCILMRDAKRGGGSVINISSVSWLHRGQVPGGVAYACSKGGVDTMTRMMAL 224

Query:   193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
             ELGV+KIRVNSI PGL KSEIT+GLM+K+WL  V  RT PL+   T DP LTSL+RYLVH
Sbjct:   225 ELGVYKIRVNSIAPGLLKSEITQGLMQKEWLKTVIERTVPLKVQQTVDPGLTSLLRYLVH 284

Query:   253 DSSEYVSGNIFIVDSGATLPGLPIFSSL 280
             DSS+Y+SGN +IVD+GA+L GLPIFSSL
Sbjct:   285 DSSKYISGNTYIVDAGASLVGLPIFSSL 312

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TIGR_CMR|GSU_1603 GSU_1603 "3-oxoacyl-(acyl-carrier-protein) reductase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 87/254 (34%), Positives = 142/254 (55%)

Query:    17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             L  K+ +VTGAS G+GRE  L LA+ G  +   A  +D  +   DEI +Q G   RA+A+
Sbjct:     3 LAGKIAVVTGASRGIGREIALRLAREGADVAVTATTLDSARKTADEI-EQIGR--RALAL 59

Query:    77 ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
              +DV A+ AA+E       EAFG++D LVNNAG++  G +   L + + +W+ ++  NL 
Sbjct:    60 AVDV-ADAAAVEALFASVVEAFGKVDILVNNAGITRDGLL---LRMKDADWDAVLDVNLK 115

Query:   135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             G++  ++     M  A + G ++NI S+     G   G V Y +SKAG+  MTK ++ EL
Sbjct:   116 GAFNCTREAAKLMTKA-RSGRIVNIGSVVG-EMGNA-GQVNYCASKAGMIGMTKAVAREL 172

Query:   195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
                 I VN++ PG  ++++T  L +K  +     +  PL  FG+ +  + + V +LV D 
Sbjct:   173 AKRGITVNAVTPGFIETDMTAVLSEK--VRESLMQQIPLERFGSPED-IANAVHFLVSDM 229

Query:   255 SEYVSGNIFIVDSG 268
               Y++G++  V+ G
Sbjct:   230 GSYITGHVLSVNGG 243

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TAIR|locus:2078693 AT3G01980 [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
 Identities = 53/162 (32%), Positives = 88/162 (54%)

Query:   110 VSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ 169
             ++G V+  L ++++E++ I K NLT  W + K V  RM+D    GS++ +++IA+  R  
Sbjct:   126 LAGKVQDILQVSQDEFHRITKINLTAPWFLLKAVATRMKDHGSGGSIVFMATIASGERAL 185

Query:   170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR 229
              PG  AYAS+ A ++ + +  ++ LG HKIRVN I  GL   +     + +D    +   
Sbjct:   186 YPGADAYASTSAAIHQLVRASAMSLGKHKIRVNMISRGLHLDDEYTASVGRDRAQKLVKD 245

Query:   230 TYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
               PL  +   D  L S V YL+ D S +++G   +VD   +L
Sbjct:   246 AAPLGQWLNPDTDLYSTVIYLISDGSRFMTGTTVLVDGAQSL 287

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

TIGR_CMR|BA_3989 BA_3989 "3-oxoacyl-(acyl-carrier-protein) reductase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 89/256 (34%), Positives = 137/256 (53%)

Query:    17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
             L  KV +VTGAS G+GR   +DLAK G  +V   A    +   + DEI K+ GS   A+A
Sbjct:     2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI-KKLGSD--AIA 58

Query:    76 VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             V  DV AN   + N V++  + FG++D LVNNAGV+      + + EEEW+ ++ TNL G
Sbjct:    59 VRADV-ANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWDTVINTNLKG 116

Query:   136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              +L +K V  R     + G ++NI+S+   + G  PG   Y ++KAG+  +TK  + EL 
Sbjct:   117 VFLCTKAVS-RFMMRQRHGRIVNIASVVGVT-GN-PGQANYVAAKAGVIGLTKTSAKELA 173

Query:   196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
                I VN+I PG   +++T+ L +   +     +  P   FG     + + V +   D S
Sbjct:   174 SRNITVNAIAPGFIATDMTDVLDEN--IKAEMLKLIPAAQFGEAQD-IANAVTFFASDQS 230

Query:   256 EYVSGNIFIVDSGATL 271
             +Y++G    VD G  +
Sbjct:   231 KYITGQTLNVDGGMVM 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|G3X6L7 G3X6L7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 85/261 (32%), Positives = 145/261 (55%)

Query:    17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             L ++V +VTG  +G+G+    +L   GC +V A+R+ DRLKS  DE+N     +V+A   
Sbjct:    18 LQHQVAIVTGGGTGIGKAIVNELLHLGCNVVIASRKFDRLKSAADELNASLSPTVQAQVT 77

Query:    77 ELDVSA-NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLT 134
              +  +  N   + N V+   + +G+I+ LVNN G  G   SP + ++ + WN +++TNLT
Sbjct:    78 PIKCNIRNEEEVNNLVKSTLDIYGKINFLVNNGG--GQFFSPAEKISSKGWNAVIETNLT 135

Query:   135 GSWLVSKYVCIR-MRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
             G++ + K V    M++    GS++NI+ +  T  G  PG V   +++ G+  +TK L+LE
Sbjct:   136 GTFYMCKAVYNSWMKEHG--GSIVNITVL--TKNG-FPGAVHSGAAREGVYNLTKSLALE 190

Query:   194 LGVHKIRVNSICPGLFKSEITEG---LMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
                  +R+NS+ PG   SE        + KD LN    +  P + FG  +  ++SLV +L
Sbjct:   191 WASSGVRINSVAPGTIYSETAFSNYDYLTKDLLNKYIQKI-PAKRFGFPEE-VSSLVCFL 248

Query:   251 VHDSSEYVSGNIFIVDSGATL 271
             +  ++ +V+G +  VD G +L
Sbjct:   249 LSPAASFVTGQLVYVDGGQSL 269

GO:0033306 "phytol metabolic process" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TIGR_CMR|CHY_1186 CHY_1186 "oxidoreductase, short chain dehydrogenase/reductase family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 88/252 (34%), Positives = 136/252 (53%)

Query:    19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
             +KVV+VTG+  G+GR      A+ G ++V A R           I+++ G    AMAV  
Sbjct:     5 DKVVVVTGSGRGIGRSIAKMYAEHGAKVVIADRNFQEALETERLISEEGGE---AMAVLA 61

Query:    79 DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
             DVS     I N ++K  +++GR+D L+NNAG  G  KSP DLT EEW+ ++ TNL G++L
Sbjct:    62 DVSKPEDVI-NLMEKIEKSYGRLDILINNAGF-GCWKSPYDLTVEEWDSVINTNLRGTFL 119

Query:   139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
              S+     M+     G+++NI+S  A      P   +YA+SK G+ A+T  L++ LG  +
Sbjct:   120 CSREAAKIMKKGGG-GAIVNIASTRAIMSE--PNSESYAASKGGILALTHALAISLGPDR 176

Query:   199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYV 258
             IRVN+I PG  ++   E L + D L + A R     D      A   L  +L  + + ++
Sbjct:   177 IRVNAISPGWIETGEYEKLREIDHLQHPAGRVGKPEDI-----ARACL--FLTAEENSFI 229

Query:   259 SGNIFIVDSGAT 270
             +G   ++D G T
Sbjct:   230 TGANLVIDGGMT 241

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3100	0.8571	0.9677	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3255	0.8678	0.9878	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3027	0.8464	0.9634	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3027	0.8464	0.9634	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3098	0.8535	0.9795	yes	no
Q21929	DCXR_CAEEL	1, ., 1, ., 1, ., 1, 0	0.3268	0.8285	0.9243	yes	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3027	0.8464	0.9634	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3027	0.8464	0.9634	yes	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3027	0.8464	0.9634	yes	no
Q29529	CBR2_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.3225	0.8142	0.9344	yes	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3027	0.8464	0.9634	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3515	0.85	0.9596	yes	no
P51831	FABG_BACSU	1, ., 1, ., 1, ., 1, 0, 0	0.3257	0.8428	0.9593	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3295	0.8821	0.9391	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3294	0.8535	0.9637	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00023262001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (286 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00011718001	SubName- Full=Chromosome undetermined scaffold_332, whole genome shotgun sequence; (253 aa)			•						0.485
	GSVIVG00021548001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (175 aa)			•						0.408

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-63
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	7e-63
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-63
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-58
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	8e-57
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-56
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-54
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-53
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-51
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	5e-51
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-50
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	5e-49
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-48
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-48
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	9e-48
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-46
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-45
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-45
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-44
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-44
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	5e-43
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	9e-43
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	5e-42
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	7e-42
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-41
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-41
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-40
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-39
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-39
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-39
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	4e-39
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	6e-39
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-38
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-38
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-38
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-38
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-38
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-37
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-37
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-37
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-37
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-37
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	5e-37
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-36
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-36
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-36
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-36
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	4e-36
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-36
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	6e-36
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-36
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	9e-36
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-35
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-35
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-35
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	5e-35
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	5e-35
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-35
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-34
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-34
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-34
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-34
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-34
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	5e-34
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	6e-34
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-33
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-33
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-33
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-33
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-33
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-33
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-33
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-32
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-32
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-32
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-32
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-32
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-32
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-32
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	8e-32
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	8e-32
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	9e-32
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-31
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-31
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-31
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-31
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-31
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-31
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-31
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-30
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-30
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-30
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-30
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-30
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-30
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-30
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-30
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	4e-30
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	8e-30
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-29
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-29
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-29
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-29
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-29
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	8e-29
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	8e-29
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	8e-29
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	8e-29
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	9e-29
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-28
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-28
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-28
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-28
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-28
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-28
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-28
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-28
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-28
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	5e-28
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-28
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	5e-28
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-28
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	7e-28
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-27
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-27
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-27
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	4e-27
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	5e-27
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	6e-27
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	9e-27
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	9e-27
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-26
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-26
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-26
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-26
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-26
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-26
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	7e-26
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	9e-26
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-25
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-25
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-25
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-25
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-25
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-25
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	3e-25
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	4e-25
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-25
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	5e-25
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-25
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-24
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-24
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-24
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-24
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-24
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-24
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	7e-24
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-23
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-23
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-23
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-23
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-23
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	7e-23
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	7e-23
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	7e-23
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-22
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-22
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-22
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-22
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-22
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	5e-22
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-21
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-21
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-21
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-21
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-21
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-21
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-21
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	4e-21
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	9e-21
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-20
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-20
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-20
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-20
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-20
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	3e-20
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	4e-20
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-19
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-19
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-19
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	7e-19
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-18
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-18
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-18
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	2e-18
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-18
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	8e-18
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-17
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-17
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-17
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-17
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	4e-17
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	7e-17
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-16
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-16
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-16
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	5e-16
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	6e-16
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	8e-16
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	2e-15
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	4e-15
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	8e-15
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	8e-15
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-14
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-14
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	2e-13
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-13
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-13
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	7e-13
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	1e-12
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	4e-12
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	4e-12
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	5e-12
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-11
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	1e-11
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-11
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-11
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	4e-11
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-10
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-10
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-10
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	4e-10
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	4e-10
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	4e-10
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	6e-10
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	1e-09
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	7e-09
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-08
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-08
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-08
pfam08659	181	pfam08659, KR, KR domain	3e-08
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	8e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-07
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	2e-07
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	6e-07
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	9e-07
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-06
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-06
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	3e-06
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	4e-06
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	1e-05
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-05
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-05
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	3e-05
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	3e-05
PRK05599	246	PRK05599, PRK05599, hypothetical protein; Provisio	4e-05
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	4e-05
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	5e-05
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	6e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-04
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-04
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-04
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	2e-04
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	2e-04
PRK07904	253	PRK07904, PRK07904, short chain dehydrogenase; Pro	5e-04
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	6e-04
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	7e-04
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	0.001
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	0.001
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	0.002
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	0.002
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	0.003
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	0.004

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  198 bits (506), Expect = 3e-63
 Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 21/260 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTGAS G+GR   L LA  G ++V      +  ++L  E+    G    A  +
Sbjct: 3   LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGG---EARVL 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS + AA+   ++ A EAFG +D LVNNAG++     P  ++EE+W+ ++  NLTG+
Sbjct: 60  VFDVS-DEAAVRALIEAAVEAFGALDILVNNAGITRDALLP-RMSEEDWDRVIDVNLTGT 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAA--TSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           + V +     M  A   G ++NISS++    + GQ      Y+++KAG+   TK L+LEL
Sbjct: 118 FNVVRAALPPMIKARY-GRIVNISSVSGVTGNPGQ----TNYSAAKAGVIGFTKALALEL 172

Query: 195 GVHKIRVNSICPGLFKSEITEGLM---KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
               I VN++ PG   +++TEGL    K + L  +     PL   G  +  + + V +L 
Sbjct: 173 ASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEI-----PLGRLGQPE-EVANAVAFLA 226

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            D++ Y++G +  V+ G  +
Sbjct: 227 SDAASYITGQVIPVNGGMYM 246

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  198 bits (504), Expect = 7e-63
 Identities = 97/258 (37%), Positives = 141/258 (54%), Gaps = 13/258 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKQSGSSVRAM 74
           L  KV +VTGASSG+GR     LA+ G R+V AARR +    ++L   I +  G   RA 
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGG--GRAA 60

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           AV  DVS +  ++E  V  A E FGRID LVNNAG++G      +LTEE+W+ ++  NL 
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++L+++     M+    +  ++NISS+A       PG  AYA+SKA L  +TK L+LEL
Sbjct: 121 GAFLLTRAALPLMK----KQRIVNISSVAGLGGP--PGQAAYAASKAALIGLTKALALEL 174

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNN-VASRTYPLRDFGTTDPALTSLVRYLVHD 253
               IRVN++ PG   + +T  L   +       +   PL   GT +  + + V +L  D
Sbjct: 175 APRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPE-EVAAAVAFLASD 233

Query: 254 S-SEYVSGNIFIVDSGAT 270
             + Y++G    VD G  
Sbjct: 234 EAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  197 bits (503), Expect = 7e-63
 Identities = 88/245 (35%), Positives = 137/245 (55%), Gaps = 11/245 (4%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
            +VTGASSG+GR     LA+ G ++V A R  + L  L             A+AV+ DVS
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAI----EALGGNAVAVQADVS 56

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK 141
            +   +E  V++A E FGR+D LVNNAG++       +LT+E+W+ ++  NLTG +L+++
Sbjct: 57  -DEEDVEALVEEALEEFGRLDILVNNAGIARP-GPLEELTDEDWDRVLDVNLTGVFLLTR 114

Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRV 201
                M+     G ++NISS+A      LPG  AYA+SKA L  +T+ L+LEL  + IRV
Sbjct: 115 AALPHMKKQGG-GRIVNISSVAG--LRPLPGQAAYAASKAALEGLTRSLALELAPYGIRV 171

Query: 202 NSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGN 261
           N++ PGL  + +   L  ++    +A+   PL   GT +  +   V +L  D + Y++G 
Sbjct: 172 NAVAPGLVDTPMLAKLGPEEAEKELAAAI-PLGRLGTPE-EVAEAVVFLASDEASYITGQ 229

Query: 262 IFIVD 266
           +  VD
Sbjct: 230 VIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  185 bits (473), Expect = 3e-58
 Identities = 88/256 (34%), Positives = 137/256 (53%), Gaps = 18/256 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKQSGSSVRAMA 75
           L+ KV +VTGAS G+GR     LA  G  +V      +   ++L  EI    G   +A+A
Sbjct: 3   LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGG---KALA 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DVS +  ++E +V +A   FG +D LVNNAG++      + + EE+W+ ++ TNLTG
Sbjct: 60  VQGDVS-DAESVERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTG 117

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + ++K V   M      G +INISS+     G  PG   YA+SKAG+   TK L+ EL 
Sbjct: 118 VFNLTKAVARPMMKQRS-GRIINISSVVGLM-GN-PGQANYAASKAGVIGFTKSLARELA 174

Query: 196 VHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
              I VN++ PG  ++++T+ L   +K+  L  +     PL   G  +  + S V +L  
Sbjct: 175 SRGITVNAVAPGFIETDMTDALPEDVKEAILAQI-----PLGRLGQPE-EIASAVAFLAS 228

Query: 253 DSSEYVSGNIFIVDSG 268
           D + Y++G    V+ G
Sbjct: 229 DEAAYITGQTLHVNGG 244

Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  182 bits (464), Expect = 8e-57
 Identities = 82/258 (31%), Positives = 134/258 (51%), Gaps = 11/258 (4%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L+ +V +VTGA+ G+GR   + LA  G  ++      D   +  + + + +G   RA  
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELV-EAAGGKARARQ 61

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
           V++    + AA++ +V    E FGR+D LV NAG+     +P  ++ +E+W  ++  NLT
Sbjct: 62  VDV---RDRAALKAAVAAGVEDFGRLDILVANAGIFP--LTPFAEMDDEQWERVIDVNLT 116

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++L+++     +  A   G ++  SS+A    G  PG   YA+SKAGL   T+ L+LEL
Sbjct: 117 GTFLLTQAALPALIRAGG-GRIVLTSSVAGPRVG-YPGLAHYAASKAGLVGFTRALALEL 174

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
               I VNS+ PG   + +   L    W   +A+   PL   G  +  + + V +L  D 
Sbjct: 175 AARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAI-PLGRLGEPED-IAAAVLFLASDE 232

Query: 255 SEYVSGNIFIVDSGATLP 272
           + Y++G    VD GATLP
Sbjct: 233 ARYITGQTLPVDGGATLP 250

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  181 bits (461), Expect = 2e-56
 Identities = 88/253 (34%), Positives = 133/253 (52%), Gaps = 19/253 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTGAS G+GR   L LA  G ++    R  +      +EI    G    A A+E D
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGG---NAAALEAD 57

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           VS +  A+E  V+K    FG +D LVNNAG++      + ++EE+W+ ++  NLTG + V
Sbjct: 58  VS-DREAVEALVEKVEAEFGPVDILVNNAGIT-RDNLLMRMSEEDWDAVINVNLTGVFNV 115

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++ V   M      G +INISS+     G  PG   YA+SKAG+   TK L+ EL    I
Sbjct: 116 TQAVIRAMIKRRS-GRIINISSVVG-LIGN-PGQANYAASKAGVIGFTKSLAKELASRGI 172

Query: 200 RVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHDSS 255
            VN++ PG   +++T+ L   +K+  L  +     PL   GT  P  + + V +L  D +
Sbjct: 173 TVNAVAPGFIDTDMTDALPEKVKEKILKQI-----PLGRLGT--PEEVANAVAFLASDDA 225

Query: 256 EYVSGNIFIVDSG 268
            Y++G +  V+ G
Sbjct: 226 SYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  176 bits (450), Expect = 1e-54
 Identities = 84/257 (32%), Positives = 131/257 (50%), Gaps = 11/257 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGASSG+G       A  G R+V   R  +  + +  EI     +  RA+AV
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEI----LAGGRAIAV 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS + A +E +V  A E FG +D LVNNAG +      LD+ E E++ I   N+   
Sbjct: 59  AADVS-DEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSP 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L ++     MR     G+++N++S A       PG   Y +SK  +  +TK L+ ELG 
Sbjct: 118 YLWTQAAVPAMRGEGG-GAIVNVASTAGLRPR--PGLGWYNASKGAVITLTKALAAELGP 174

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVA--SRTYPLRDFGTTDPALTSLVRYLVHDS 254
            KIRVN++ P + ++ + E  M +    N A    T PL   GT +  + +   +L  D 
Sbjct: 175 DKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPED-IANAALFLASDE 233

Query: 255 SEYVSGNIFIVDSGATL 271
           + +++G   +VD G  +
Sbjct: 234 ASWITGVTLVVDGGRCV 250

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  174 bits (443), Expect = 1e-53
 Identities = 87/254 (34%), Positives = 136/254 (53%), Gaps = 12/254 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  +V +VTGA+ GLGR   L LA+AG   +V      +  + L + +        RA A
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE---ALGRRAQA 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DV  + AA+E +V  A E FGRID LVNNAG+        D++++EW+ ++  NL+G
Sbjct: 61  VQADV-TDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLA-DMSDDEWDEVIDVNLSG 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + + + V   MR   + G ++NISS+A       PG   YA++KAGL  +TK L+ EL 
Sbjct: 119 VFHLLRAVVPPMRKQ-RGGRIVNISSVAGLPG--WPGRSNYAAAKAGLVGLTKALARELA 175

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            + I VN + PG   +++ E  +++      A    PL   GT +  +   V +L  D+S
Sbjct: 176 EYGITVNMVAPGDIDTDMKEATIEEAREAKDAE--TPLGRSGTPE-DIARAVAFLCSDAS 232

Query: 256 EYVSGNIFIVDSGA 269
           +Y++G +  V  G 
Sbjct: 233 DYITGQVIEVTGGV 246

Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  167 bits (426), Expect = 3e-51
 Identities = 85/252 (33%), Positives = 135/252 (53%), Gaps = 20/252 (7%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDV 80
            +VTGAS G+GR   L LAK G +++   R  +   + + +E+       V+A+ V  DV
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL---KAYGVKALGVVCDV 57

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
           S +   ++  V++  E  G ID LVNNAG++      + + EE+W+ ++ TNLTG + ++
Sbjct: 58  S-DREDVKAVVEEIEEELGPIDILVNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFNLT 115

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
           + V   M      G +INISS+     G   G   YA+SKAG+   TK L+ EL    I 
Sbjct: 116 QAVLRIMIKQRS-GRIINISSVVG-LMGN-AGQANYAASKAGVIGFTKSLAKELASRNIT 172

Query: 201 VNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGT-TDPALTSLVRYLVHDSSE 256
           VN++ PG   +++T+ L   +KK  L+ +     PL  FGT  + A  + V +L  D + 
Sbjct: 173 VNAVAPGFIDTDMTDKLSEKVKKKILSQI-----PLGRFGTPEEVA--NAVAFLASDEAS 225

Query: 257 YVSGNIFIVDSG 268
           Y++G +  VD G
Sbjct: 226 YITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  167 bits (425), Expect = 5e-51
 Identities = 90/256 (35%), Positives = 132/256 (51%), Gaps = 9/256 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTGASSG+G+   + LA AG  +V   R + D  + + +EI K  G   +A+A
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI-KAVG--GKAIA 57

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DVS     +    Q A + FG +D LVNNAG+ G   S  ++T E+WN ++  NLTG
Sbjct: 58  VQADVS-KEEDVVALFQSAIKEFGTLDILVNNAGLQG-DASSHEMTLEDWNKVIDVNLTG 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L ++    R R +  +G +IN+SS+    +   PG V YA+SK G+  MTK L+ E  
Sbjct: 116 QFLCAREAIKRFRKSKIKGKIINMSSVH--EKIPWPGHVNYAASKGGVKMMTKTLAQEYA 173

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN+I PG   + I                  P+   G  +  + +   +L  D +
Sbjct: 174 PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPE-EIAAAAAWLASDEA 232

Query: 256 EYVSGNIFIVDSGATL 271
            YV+G    VD G TL
Sbjct: 233 SYVTGTTLFVDGGMTL 248

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  166 bits (423), Expect = 1e-50
 Identities = 92/258 (35%), Positives = 140/258 (54%), Gaps = 16/258 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           +L  KV +VTGAS G+GR     LAK G + ++A     +  + L +EI ++ G    A+
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD---AI 58

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           AV+ DVS+     EN V++  E FG+ID LVNNAG+S       D+T+EEW+ ++  NLT
Sbjct: 59  AVKADVSSEEDV-ENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLT 116

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSL 192
           G  L+++Y    M    + G ++NISSI     G +     V Y++SK  +NA TK L+ 
Sbjct: 117 GVMLLTRYALPYMIK-RKSGVIVNISSI----WGLIGASCEVLYSASKGAVNAFTKALAK 171

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           EL    IRVN++ PG   +E+     ++D      +   PL   G  +  +  +V +L  
Sbjct: 172 ELAPSGIRVNAVAPGAIDTEMWSSFSEED--KEGLAEEIPLGRLGKPE-EIAKVVLFLAS 228

Query: 253 DSSEYVSGNIFIVDSGAT 270
           D + Y++G I  VD G T
Sbjct: 229 DDASYITGQIITVDGGWT 246

Length = 247

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  162 bits (413), Expect = 5e-49
 Identities = 83/257 (32%), Positives = 137/257 (53%), Gaps = 12/257 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTG S GLG +    L +AG R+V +AR+ + L+     + +  G  + A+ +
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL-EALG--IDALWI 66

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS-GAVKSPLDLTEEEWNHIMKTNLTG 135
             DV+ + A IE   ++  E FG +D LVNNAG + GA     D   E W+ +M  N+ G
Sbjct: 67  AADVA-DEADIERLAEETLERFGHVDILVNNAGATWGA--PAEDHPVEAWDKVMNLNVRG 123

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            +L+S+ V  R       G +IN++S+A    +  ++   +AY +SK  +   T+ L+ E
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
            G H IRVN+I PG F +++T G +++    ++ + T PL   G  +  L      L  D
Sbjct: 184 WGPHGIRVNAIAPGFFPTKMTRGTLERLG-EDLLAHT-PLGRLGDDED-LKGAALLLASD 240

Query: 254 SSEYVSGNIFIVDSGAT 270
           +S++++G I  VD G +
Sbjct: 241 ASKHITGQILAVDGGVS 257

Length = 259

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  160 bits (408), Expect = 2e-48
 Identities = 91/254 (35%), Positives = 134/254 (52%), Gaps = 9/254 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTGAS G+G      LA+AG  IV  +R  ++ +     I K+    V A A 
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEG---VEATAF 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS +  AI+ +V+   E FG+ID LVNNAG+     +  +  E EW  ++  NL G 
Sbjct: 60  TCDVS-DEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPA-EEFPEAEWRDVIDVNLNGV 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + VS+ V   M      G +INI S+ +   G  P   AYA+SK G+  +TK L+ E   
Sbjct: 118 FFVSQAVARHMIKQGH-GKIINICSLLSELGG--PPVPAYAASKGGVAGLTKALATEWAR 174

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           H I+VN+I PG F +E+TE ++     N+   +  P   +G  +  + + V +L  D+S+
Sbjct: 175 HGIQVNAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAV-FLASDASD 233

Query: 257 YVSGNIFIVDSGAT 270
           YV+G I  VD G  
Sbjct: 234 YVNGQIIFVDGGWL 247

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  159 bits (404), Expect = 9e-48
 Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 11/215 (5%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KVV++TG SSG+G    L LA  G R++A AR  D+L+SL + +N           +ELD
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLN------DNLEVLELD 54

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           V+ +  +I+ +V++  E FGRID LVNNAG  G      + + EE   + + N+ G   V
Sbjct: 55  VT-DEESIKAAVKEVIERFGRIDVLVNNAGY-GLFGPLEETSIEEVRELFEVNVFGPLRV 112

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++     MR     G ++N+SS+A       P    Y +SKA L A+++ L LEL    I
Sbjct: 113 TRAFLPLMR-KQGSGRIVNVSSVAG--LVPTPFLGPYCASKAALEALSESLRLELAPFGI 169

Query: 200 RVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR 234
           +V  I PG  ++   +        +   S   P R
Sbjct: 170 KVTIIEPGPVRTGFADNAAGSALEDPEISPYAPER 204

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  159 bits (404), Expect = 9e-48
 Identities = 79/259 (30%), Positives = 138/259 (53%), Gaps = 14/259 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV  +TG  +G+G+      A+ G  +  A R+ + L++  +EI+  +G   RA  +
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGG--RAHPI 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           + DV  +  A+E +V +  + FG+ID L+NNA   G   +P   L+   +  ++  +L G
Sbjct: 59  QCDVR-DPEAVEAAVDETLKEFGKIDILINNAA--GNFLAPAESLSPNGFKTVIDIDLNG 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++  +K V  R+ +A   GS++NIS  A  +    P  V  A++KAG++A+T+ L++E G
Sbjct: 116 TFNTTKAVGKRLIEAKHGGSILNIS--ATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWG 173

Query: 196 VHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
            + IRVN+I PG   +  TEG+ +               PL   GT +  + +L  +L+ 
Sbjct: 174 PYGIRVNAIAPGPIPT--TEGMERLAPSGKSEKKMIERVPLGRLGTPE-EIANLALFLLS 230

Query: 253 DSSEYVSGNIFIVDSGATL 271
           D++ Y++G   +VD G  L
Sbjct: 231 DAASYINGTTLVVDGGQWL 249

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  155 bits (395), Expect = 2e-46
 Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 10/253 (3%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  K  +VTGA+ GLG  F   LA+AG  +          + L   +    G   RA A
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG---RAHA 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  D+ A+ A+++     A  A G +D LVNNAG++   KS  +L  + W+ +M  N+ G
Sbjct: 61  IAADL-ADPASVQRFFDAAAAALGGLDGLVNNAGIT-NSKSATELDIDTWDAVMNVNVRG 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++L+ +     +RD+ + G ++N++S   T+    P   AY +SK  +  MT+ L+ ELG
Sbjct: 119 TFLMLRAALPHLRDSGR-GRIVNLAS--DTALWGAPKLGAYVASKGAVIGMTRSLARELG 175

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              I VN+I PGL  +E T  +   D  +    +   L      D  +   V +L+ D++
Sbjct: 176 GRGITVNAIAPGLTATEATAYV-PADERHAYYLKGRALERLQVPDD-VAGAVLFLLSDAA 233

Query: 256 EYVSGNIFIVDSG 268
            +V+G +  V+ G
Sbjct: 234 RFVTGQLLPVNGG 246

Length = 250

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  152 bits (386), Expect = 4e-45
 Identities = 84/263 (31%), Positives = 125/263 (47%), Gaps = 25/263 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L+ KV ++TGASSG+GR      A+ G ++V  ARR   L  L  EI  + G    A+A
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG---EAVA 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  DV     A +  V  A E FG +D   NNAG  G +    +++ E W   + TNLT 
Sbjct: 60  LAGDVRDEAYA-KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTS 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++L +K+    M  A   GS+I  S+    + G  PG  AYA+SKAGL  +T+ L+ E G
Sbjct: 119 AFLGAKHQIPAML-ARGGGSLIFTSTFVGHTAG-FPGMAAYAASKAGLIGLTQVLAAEYG 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR------- 248
              IRVN++ PG   + +                T     F     AL  + +       
Sbjct: 177 AQGIRVNALLPGGTDTPMG----------RAMGDTPEALAFVAGLHALKRMAQPEEIAQA 226

Query: 249 --YLVHDSSEYVSGNIFIVDSGA 269
             +L  D++ +V+G   +VD G 
Sbjct: 227 ALFLASDAASFVTGTALLVDGGV 249

Length = 254

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  151 bits (383), Expect = 9e-45
 Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 12/198 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV ++TGASSG+G      LA+AG ++V AARR +RL++L DEI         A+A+
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAG-----AALAL 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTG 135
            LDV+ + AA+E +++   E FGRID LVNNAG+  A+  PLD    ++W+ ++ TN+ G
Sbjct: 59  ALDVT-DRAAVEAAIEALPEEFGRIDILVNNAGL--ALGDPLDEADLDDWDRMIDTNVKG 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
               ++ V   M +    G +IN+ SIA       PGG  Y ++KA + A +  L  EL 
Sbjct: 116 LLNGTRAVLPGMVERKS-GHIINLGSIAGRYPY--PGGAVYGATKAAVRAFSLGLRQELA 172

Query: 196 VHKIRVNSICPGLFKSEI 213
              IRV  I PGL ++  
Sbjct: 173 GTGIRVTVISPGLVETTE 190

Length = 246

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  150 bits (380), Expect = 3e-44
 Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 13/260 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV ++TG+SSG+G    +  A+ G R+    R  +RL+       +   S  + + V
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+       +  +      FGR+D LVNNAG+        D   EE++ +M  NL   
Sbjct: 61  VADL-TEEEGQDRIISTTLAKFGRLDILVNNAGILAK-GGGEDQDIEEYDKVMNLNLRAV 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             ++K     +     +G ++N+SS+A       PG + Y  SKA L+  T+C +LEL  
Sbjct: 119 IYLTKLAVPHL--IKTKGEIVNVSSVAGGR--SFPGVLYYCISKAALDQFTRCTALELAP 174

Query: 197 HKIRVNSICPGLFKSEITEGLMKKD-----WLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
             +RVNS+ PG+  +     +   +     +L+  A  T+PL   GT D  +   + +L 
Sbjct: 175 KGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSR-AKETHPLGRPGTVD-EVAEAIAFLA 232

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            D+S +++G +  VD G  L
Sbjct: 233 SDASSFITGQLLPVDGGRHL 252

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  150 bits (380), Expect = 3e-44
 Identities = 95/259 (36%), Positives = 141/259 (54%), Gaps = 16/259 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGASSGLG  F   LA+AG ++V A+RRV+RLK L  EI  + G+   A  V
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA---AHVV 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+ +  +I+ +V  A    G ID LVNN+GVS   +  +D+T  +++ +  TN  G+
Sbjct: 64  SLDVT-DYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTRGA 121

Query: 137 WLVSKYVCIRM-------RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           + V++ V  RM        +    G +INI+S+A      LP    Y  SKA +  MT+ 
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR--VLPQIGLYCMSKAAVVHMTRA 179

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           ++LE G H I VN+ICPG   +EI     + +    + S   P +  G  +  L  L+  
Sbjct: 180 MALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVS-MLPRKRVGKPED-LDGLLLL 237

Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  D S++++G I   D G
Sbjct: 238 LAADESQFINGAIISADDG 256

Length = 258

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  146 bits (371), Expect = 5e-43
 Identities = 83/257 (32%), Positives = 122/257 (47%), Gaps = 15/257 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  KV +VTG + GLG      L   G ++V +    +  ++   E+         A  
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGD------AARF 55

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             LDV+ +       V  A EAFGR+D LVNNAG+     +    T EEW  ++  NLTG
Sbjct: 56  FHLDVT-DEDGWTAVVDTAREAFGRLDVLVNNAGIL-TGGTVETTTLEEWRRLLDINLTG 113

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L ++ V   M++A   GS+IN+SSI        P   AY +SK  +  +TK  +LE  
Sbjct: 114 VFLGTRAVIPPMKEAG-GGSIINMSSIEGLV--GDPALAAYNASKGAVRGLTKSAALECA 170

Query: 196 VHK--IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                IRVNS+ PG   + +T+ L+           T P+   G  D  +   V YL  D
Sbjct: 171 TQGYGIRVNSVHPGYIYTPMTDELLIAQGEMGNYPNT-PMGRAGEPD-EIAYAVVYLASD 228

Query: 254 SSEYVSGNIFIVDSGAT 270
            S +V+G+  +VD G T
Sbjct: 229 ESSFVTGSELVVDGGYT 245

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  146 bits (369), Expect = 9e-43
 Identities = 91/252 (36%), Positives = 132/252 (52%), Gaps = 17/252 (6%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K V+VTGASSG+GR   + LA+ G R+VAAAR    L  L  E             + LD
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG--------CEPLRLD 61

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           V  + A      + A  A G  D LVN AG++ +++S LD+T E ++ +M  N  G+ LV
Sbjct: 62  VGDDAAI-----RAALAAAGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALV 115

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           +++V   M  A + GS++N+SS AA   G LP  +AY +SKA L+A+T+ L +ELG H I
Sbjct: 116 ARHVARAMIAAGRGGSIVNVSSQAAL-VG-LPDHLAYCASKAALDAITRVLCVELGPHGI 173

Query: 200 RVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVS 259
           RVNS+ P +  + +          +       PL  F   D      + +L+ D++  VS
Sbjct: 174 RVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAP-ILFLLSDAASMVS 232

Query: 260 GNIFIVDSGATL 271
           G    VD G T 
Sbjct: 233 GVSLPVDGGYTA 244

Length = 245

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  144 bits (365), Expect = 5e-42
 Identities = 80/259 (30%), Positives = 134/259 (51%), Gaps = 18/259 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTG S G+G      LA+AG  +        R +   +E+ K+ G  V+  A 
Sbjct: 6   LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYG--VKTKAY 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + DVS +  ++E + ++  + FG+ID L+ NAG++   K  LD T E+WN ++  NL G 
Sbjct: 64  KCDVS-SQESVEKTFKQIQKDFGKIDILIANAGIT-VHKPALDYTYEQWNKVIDVNLNGV 121

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           +  ++      +    +GS+I  +S++ T  +R Q     AY +SKA +  + K L++E 
Sbjct: 122 FNCAQAAAKIFKK-QGKGSLIITASMSGTIVNRPQPQ--AAYNASKAAVIHLAKSLAVEW 178

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
             + IRVNSI PG   +++T+ +   ++K W + +     PL+        L     YL 
Sbjct: 179 AKYFIRVNSISPGYIDTDLTDFVDKELRKKWESYI-----PLKRIALP-EELVGAYLYLA 232

Query: 252 HDSSEYVSGNIFIVDSGAT 270
            D+S Y +G+  I+D G T
Sbjct: 233 SDASSYTTGSDLIIDGGYT 251

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  144 bits (364), Expect = 7e-42
 Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 18/258 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK---QSGSSVR 72
            LD++ V++TG S GLGR   + LA  G  ++       R ++  D +      +G    
Sbjct: 3   SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKAL 62

Query: 73  AMAVEL-DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMK 130
            +A ++ D +A  AA++  V    E FGR+D LVNNAG+  A  +    L+ EEW+ ++ 
Sbjct: 63  GLAFDVRDFAATRAALDAGV----EEFGRLDILVNNAGI--ATDAAFAELSIEEWDDVID 116

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            NL G + V++     M  A + G ++NI+S+A   RG   G V YA+SKAGL  +TK L
Sbjct: 117 VNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV-RGN-RGQVNYAASKAGLIGLTKTL 174

Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           + EL    I VN++ PG   + + +     + L N      P++  G  D  + +LV +L
Sbjct: 175 ANELAPRGITVNAVAPGAINTPMADNAAPTEHLLN----PVPVQRLGEPD-EVAALVAFL 229

Query: 251 VHDSSEYVSGNIFIVDSG 268
           V D++ YV+G +  VD G
Sbjct: 230 VSDAASYVTGQVIPVDGG 247

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  142 bits (361), Expect = 2e-41
 Identities = 81/256 (31%), Positives = 128/256 (50%), Gaps = 15/256 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTGAS G+GR     LA+ G  +V   A      + +  EI    G   +A+A
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGG---KAIA 57

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
           V+ DVS + + +      A +AFG +D LVNNAGV   +K P+ + +EEE++ +   N  
Sbjct: 58  VQADVS-DPSQVARLFDAAEKAFGGVDILVNNAGVM--LKKPIAETSEEEFDRMFTVNTK 114

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++ V +    R+RD    G +INISS    +    P   AYA SKA + A T+ L+ EL
Sbjct: 115 GAFFVLQEAAKRLRDG---GRIINISSSLTAAY--TPNYGAYAGSKAAVEAFTRVLAKEL 169

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
           G   I VN++ PG   +++      ++ +   A  + PL   G  +  +  +V +L    
Sbjct: 170 GGRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMS-PLGRLGEPED-IAPVVAFLASPD 227

Query: 255 SEYVSGNIFIVDSGAT 270
             +V+G +   + G  
Sbjct: 228 GRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  142 bits (361), Expect = 2e-41
 Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 24/263 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L +KV+++TG + GLGR     LA+ G ++       ++L+    E             
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC---GALGTEVRG 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV----------SGAVKSPLDLTEEEW 125
              +V  +   +E +  +  E FG+++ L+NNAG+           G V S + L  E++
Sbjct: 59  YAANV-TDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSL--EQF 115

Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
             ++  NLTG +L  +    +M ++  +G +INISSIA   R    G   Y++SKAG+ A
Sbjct: 116 QSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA---RAGNMGQTNYSASKAGVAA 172

Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS 245
           MT   + EL  + IRV +I PG+ ++E+T   MK + L  +     P+   G  +  +  
Sbjct: 173 MTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEK-MIPVGRLGEPE-EIAH 229

Query: 246 LVRYLVHDSSEYVSGNIFIVDSG 268
            VR+++   ++YV+G +  +D G
Sbjct: 230 TVRFII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  140 bits (356), Expect = 1e-40
 Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 6/193 (3%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K V++TGASSG+G       AKAG +++   RR +RL+ L DE+  +    V  + ++LD
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKV--LPLQLD 58

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           VS +  +IE +++   E F  ID LVNNAG++  +    +   E+W  ++ TN+ G   V
Sbjct: 59  VS-DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNV 117

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++ +   M   NQ G +IN+ SIA   R    GG  Y ++KA +   +  L  +L    I
Sbjct: 118 TRLILPIMIARNQ-GHIINLGSIAG--RYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGI 174

Query: 200 RVNSICPGLFKSE 212
           RV +I PGL ++E
Sbjct: 175 RVTNIEPGLVETE 187

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  138 bits (349), Expect = 1e-39
 Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 21/260 (8%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +K++++TGA+  +G+ FC  L  AG R++ A      L+ L +E+     +  R +A+EL
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKN--RVIALEL 59

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV-KSPL-DLTEEEWNHIMKTNLTGS 136
           D+++   +I+  ++   E FGRID L+NNA  S  V  S   +   E+WN ++  NL G+
Sbjct: 60  DITSK-ESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGA 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAAT--------SRGQLPGGVAYASSKAGLNAMTK 188
           +L S+      +    +GS+INI+SI              Q+   V Y+  KAG+  +TK
Sbjct: 119 FLCSQAFIKLFKK-QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTK 177

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
            L+       IRVN+I PG   +         ++L     +  PL+     +    +++ 
Sbjct: 178 YLAKYYADTGIRVNAISPGGILNNQPS-----EFLEKYTKKC-PLKRMLNPEDLRGAII- 230

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L+ D+S YV+G   ++D G
Sbjct: 231 FLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  137 bits (348), Expect = 2e-39
 Identities = 74/255 (29%), Positives = 132/255 (51%), Gaps = 10/255 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ K  +VTG + G+G     +LA  G  +   AR    L     E  ++ G  V     
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK-GFKVEGSVC 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           ++   +    + ++V   +   G+++ LVNNAG +   K   D TEE+++ IM TN   +
Sbjct: 63  DVSSRSERQELMDTVASHFG--GKLNILVNNAGTN-IRKEAKDYTEEDYSLIMSTNFEAA 119

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S+     ++ A+  G+++ ISS+A      +P G  Y ++K  LN +T+ L+ E   
Sbjct: 120 YHLSRLAHPLLK-ASGNGNIVFISSVAGVI--AVPSGAPYGATKGALNQLTRSLACEWAK 176

Query: 197 HKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
             IRVN++ P +  + + E +++ K+ L+ V  RT PL+ FG  +  + +LV +L   ++
Sbjct: 177 DNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERT-PLKRFGEPE-EVAALVAFLCMPAA 234

Query: 256 EYVSGNIFIVDSGAT 270
            Y++G I  VD G T
Sbjct: 235 SYITGQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  137 bits (347), Expect = 2e-39
 Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 16/264 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
            +V +VT + SG+G+   L LA+ G  I +      +  K   +E+       VRA   +
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG---VRAEIRQ 58

Query: 78  LDVS-ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           LD+S     A   ++ K  +  GRID LVNNAG        LD+  +EW  I   ++ G+
Sbjct: 59  LDLSDLPEGA--QALDKLIQRLGRIDVLVNNAGAMTKAPF-LDMDFDEWRKIFTVDVDGA 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSI-AATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +L S+     M    Q G +INI+S+   T     PG  AY ++K  L  +TK ++LEL 
Sbjct: 116 FLCSQIAARHMVKQGQGGRIINITSVHEHTPL---PGASAYTAAKHALGGLTKAMALELV 172

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            H I VN++ PG   + +    M    +   +    PL   G T   + SLV +L  + +
Sbjct: 173 EHGILVNAVAPGAIATPMNG--MDDSDVKPDSRPGIPLGRPGDTH-EIASLVAWLCSEGA 229

Query: 256 EYVSGNIFIVDSGATLPGLPIFSS 279
            Y +G   IVD G  L   P F+S
Sbjct: 230 SYTTGQSLIVDGGFMLAN-PQFNS 252

Length = 256

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  136 bits (344), Expect = 4e-39
 Identities = 84/255 (32%), Positives = 117/255 (45%), Gaps = 27/255 (10%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKQSGSSVRAMA 75
            V +VTGA+  +GR     LA  G R+V    R      RLK   DE+N        A+ 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLK---DELNA---LRNSAVL 54

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ D+S + AA  + V  A+ AFGR D LVNNA            +E+ W  +   NL  
Sbjct: 55  VQADLS-DFAACADLVAAAFRAFGRCDVLVNNASAFYP-TPLGQGSEDAWAELFGINLKA 112

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L+ +    R    ++ GS+INI   A T R  L G  AY  SKA L  +T+  +LEL 
Sbjct: 113 PYLLIQA-FARRLAGSRNGSIINIID-AMTDRP-LTGYFAYCMSKAALEGLTRSAALELA 169

Query: 196 VHKIRVNSICPGL-FKSEITEGLMKKDWLNNVASRTYP-LRDFGTTDPALTSLVRYLVHD 253
              IRVN I PGL    E  +   +++ L  V  +  P   +           V +L+  
Sbjct: 170 -PNIRVNGIAPGLILLPEDMDAEYRENALRKVPLKRRPSAEEI-------ADAVIFLLD- 220

Query: 254 SSEYVSGNIFIVDSG 268
            S Y++G I  VD G
Sbjct: 221 -SNYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  136 bits (344), Expect = 6e-39
 Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 20/262 (7%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            KV +VT ASSG+G      LA+ G R+   AR  + L+    E+          +AV  
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRA---GGAGVLAVVA 57

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           D++     I+  V+KA +AFGR+D LVNNAG         +LT+E+W       L     
Sbjct: 58  DLTD-PEDIDRLVEKAGDAFGRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKLLSVIR 115

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           + + V   M+     G ++NISS+    +   P  V    ++AGL  + K LS EL    
Sbjct: 116 IVRAVLPGMK-ERGWGRIVNISSLTV--KEPEPNLVLSNVARAGLIGLVKTLSRELAPDG 172

Query: 199 IRVNSICPGLFKSEIT----------EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
           + VNS+ PG   +E            EG+  ++    VAS+  PL   G  +  L +L+ 
Sbjct: 173 VTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQI-PLGRVGKPE-ELAALIA 230

Query: 249 YLVHDSSEYVSGNIFIVDSGAT 270
           +L  + + Y++G   +VD G T
Sbjct: 231 FLASEKASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  135 bits (341), Expect = 1e-38
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 26/261 (9%)

Query: 13  PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVR 72
                  K  +VTGA  G+GR     LAKAG R+VA +R    L SL  E          
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE-------CPG 53

Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKT 131
              V +D+S   A      ++A  + G +D LVNNA V  A+  P L++T+E ++     
Sbjct: 54  IEPVCVDLSDWDA-----TEEALGSVGPVDLLVNNAAV--AILQPFLEVTKEAFDRSFDV 106

Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           N+     VS+ V   M      GS++N+SS A  S+  L     Y S+KA L+ +TK ++
Sbjct: 107 NVRAVIHVSQIVARGMIARGVPGSIVNVSSQA--SQRALTNHTVYCSTKAALDMLTKVMA 164

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT----YPLRDFGTTDPALTSLV 247
           LELG HKIRVNS+ P +  +++     + +W +   ++      PL  F   +  + +++
Sbjct: 165 LELGPHKIRVNSVNPTVVMTDMG----RDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAIL 220

Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L+ D S   +G+   VD G
Sbjct: 221 -FLLSDKSSMTTGSTLPVDGG 240

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 1e-38
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 19/258 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTG +SG+G       A  G R+    R  D  +               A  +
Sbjct: 13  LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEV------AAQLLGGNAKGL 66

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS +  ++E +V     AFGRID LVN+AGV   +    D++EE+W+  +  NL GS
Sbjct: 67  VCDVS-DSQSVEAAVAAVISAFGRIDILVNSAGV-ALLAPAEDVSEEDWDKTIDINLKGS 124

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L+++ V   M  A   G ++N++S A      L   VAY +SKAG+  MTK L+LE G 
Sbjct: 125 FLMAQAVGRHMIAAGG-GKIVNLASQAGVV--ALERHVAYCASKAGVVGMTKVLALEWGP 181

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNV---ASRTYPLRDFGTTDPALTSLVRYLVHD 253
           + I VN+I P +  +E    L KK W       A +  P   F   +  + +   +L  D
Sbjct: 182 YGITVNAISPTVVLTE----LGKKAWAGEKGERAKKLIPAGRFAYPE-EIAAAALFLASD 236

Query: 254 SSEYVSGNIFIVDSGATL 271
           ++  ++G   ++D G T+
Sbjct: 237 AAAMITGENLVIDGGYTI 254

Length = 255

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 1e-38
 Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 14/255 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           + D+KV +VTGA+ G+G+ +   LA+ G  +V A    +  + +  +I    G+   A+A
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGT---AIA 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE--EEWNHIMKTNL 133
           V++DV ++  + +        AFG ID LVNNA + G +K  L +T   + +   M  NL
Sbjct: 60  VQVDV-SDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNL 118

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G+ + ++ V   M      G+++N SS AA     L     Y  +K GLN +T+ L+ E
Sbjct: 119 DGALVCTRAVYKHMAKRGG-GAIVNQSSTAA----WLYSNF-YGLAKVGLNGLTQQLARE 172

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           LG   IRVN+I PG   +E T  +  K+++ ++     PL   GT +  L  +  +L+ D
Sbjct: 173 LGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGI-PLSRMGTPED-LVGMCLFLLSD 230

Query: 254 SSEYVSGNIFIVDSG 268
            + +++G IF VD G
Sbjct: 231 EASWITGQIFNVDGG 245

Length = 250

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 1e-38
 Identities = 76/256 (29%), Positives = 130/256 (50%), Gaps = 9/256 (3%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
               KV +VTG ++G+GR   L  A+ G ++V A R     +     I +++G    A+ 
Sbjct: 4   TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI-REAGGE--ALF 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DV+ + A ++  V++   A+GR+D   NNAG+        + +E E++ IM  N+ G
Sbjct: 61  VACDVTRD-AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKG 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            WL  KY  I +  A   G+++N +S+A    G  P    YA+SK  +  +TK  ++E  
Sbjct: 120 VWLCMKYQ-IPLMLAQGGGAIVNTASVAGL--GAAPKMSIYAASKHAVIGLTKSAAIEYA 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
              IRVN++CP +  +++     + D      A+  +P+   G  +  + S V YL  D 
Sbjct: 177 KKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVE-EVASAVLYLCSDG 235

Query: 255 SEYVSGNIFIVDSGAT 270
           + + +G+  +VD GAT
Sbjct: 236 ASFTTGHALMVDGGAT 251

Length = 253

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score =  133 bits (338), Expect = 4e-38
 Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
              ++TGASSG+G+   L  AKAG  +   AR  D L++L  E+ + +G    A +++L 
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAEL-RSTGVKAAAYSIDL- 64

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWL 138
             +N  AI   + +  E FG  D L+NNAG+  A   PL ++   +W  +++ NLT  + 
Sbjct: 65  --SNPEAIAPGIAELLEQFGCPDVLINNAGM--AYTGPLLEMPLSDWQWVIQLNLTSVFQ 120

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
               V   MR A   G +IN+SSIAA  R   P   AY  SKA L A TKCL+ E   H 
Sbjct: 121 CCSAVLPGMR-ARGGGLIINVSSIAA--RNAFPQWGAYCVSKAALAAFTKCLAEEERSHG 177

Query: 199 IRVNSICPG 207
           IRV +I  G
Sbjct: 178 IRVCTITLG 186

Length = 241

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 1e-37
 Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 25/268 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  KV +VTGA+SG+G E  L LAK G ++V A    +   +  + + K  G   +A+ 
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGG---KAIG 57

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
           V +DV+ +  AI   +  A E FG +D LVNNAG+     +P+ D   E+W  ++   L 
Sbjct: 58  VAMDVT-DEEAINAGIDYAVETFGGVDILVNNAGIQ--HVAPIEDFPTEKWKKMIAIMLD 114

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSL 192
           G++L +K     M+ A   G +IN++S+     G +   G  AY S+K GL  +TK ++L
Sbjct: 115 GAFLTTKAALPIMK-AQGGGRIINMASV----HGLVGSAGKAAYVSAKHGLIGLTKVVAL 169

Query: 193 ELGVHKIRVNSICPG-----LFKSEI-----TEGLMKKDWLNNVASRTYPLRDFGTTDPA 242
           E   H + VN+ICPG     L + +I       G+ +++ L +V     P + F T +  
Sbjct: 170 EGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE-E 228

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
           +     +L   +++ V+G  ++VD G T
Sbjct: 229 IADYALFLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  133 bits (336), Expect = 1e-37
 Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 13/202 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KVV++TGASSG+G E    LA+ G R+V +ARR +RL+ +  E  +    +     V
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLEL--GAPSPHVV 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
            LD+S +    E  V++A + FG +D L+NNAG+S  ++S   D + +    IM+ N  G
Sbjct: 59  PLDMS-DLEDAEQVVEEALKLFGGLDILINNAGIS--MRSLFHDTSIDVDRKIMEVNYFG 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLE 193
              ++K     + + +Q GS++ +SSIA    G++  P   AYA+SK  L      L  E
Sbjct: 116 PVALTKAALPHLIERSQ-GSIVVVSSIA----GKIGVPFRTAYAASKHALQGFFDSLRAE 170

Query: 194 LGVHKIRVNSICPGLFKSEITE 215
           L    I V  +CPGL  + I  
Sbjct: 171 LSEPNISVTVVCPGLIDTNIAM 192

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  139 bits (354), Expect = 1e-37
 Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 8/190 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTGA+ G+G+     LA  G  +V A    +  ++   E+    G   RA+ V
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAEL----GGPDRALGV 475

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+ + AA++ + ++A  AFG +D +V+NAG++       + ++E+W      N TG 
Sbjct: 476 ACDVT-DEAAVQAAFEEAALAFGGVDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATGH 533

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +LV++     M+     GS++ I+S  A + G  P   AY ++KA    + + L+LELG 
Sbjct: 534 FLVAREAVRIMKAQGLGGSIVFIASKNAVNPG--PNFGAYGAAKAAELHLVRQLALELGP 591

Query: 197 HKIRVNSICP 206
             IRVN + P
Sbjct: 592 DGIRVNGVNP 601

Length = 681

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 4e-37
 Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 18/260 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V +VTGA SG+GR      A+ G R+V A R  +  + +   I        RA A 
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG----RAFAR 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
           + DV +  A  E  V      +GR+D LVNNAG    G V   +   E +W+ +M+ N+ 
Sbjct: 59  QGDVGSAEAV-EALVDFVAARWGRLDVLVNNAGFGCGGTV---VTTDEADWDAVMRVNVG 114

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G +L +KY    M+     GS++N +S  A + G   G  AY +SK  + ++T+ ++L+ 
Sbjct: 115 GVFLWAKYAIPIMQR-QGGGSIVNTASQLALAGG--RGRAAYVASKGAIASLTRAMALDH 171

Query: 195 GVHKIRVNSICPGLFKS----EITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
               IRVN++ PG   +     I       + L       +P+  FGT +    + + +L
Sbjct: 172 ATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAAL-FL 230

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
             D S + +G   +VD G  
Sbjct: 231 ASDESSFATGTTLVVDGGWL 250

Length = 252

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  131 bits (332), Expect = 4e-37
 Identities = 87/273 (31%), Positives = 132/273 (48%), Gaps = 29/273 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSV----- 71
           L+ KV  +TGA+ G GR   + LA  G  I+A    +D    L D       +       
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIA----IDLCAPLSDYPTYPLATREDLDET 56

Query: 72  ---------RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE 122
                    + +A + DV  + A +   V+   E FGR+D +V NAGV    +S  +L+E
Sbjct: 57  ARLVEALGRKVLARKADVR-DLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRS-WELSE 114

Query: 123 EEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAG 182
           E+W+ ++  NLTG W   K V   M +    GS+I  SS+A      LPG   YA++K G
Sbjct: 115 EQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLK--ALPGLAHYAAAKHG 172

Query: 183 LNAMTKCLSLELGVHKIRVNSICPGLFKSEITE-GLMKKDWLNN-VASRTY----PLRDF 236
           L  +TK L+ EL  + IRVNSI P    + +     M++ +L    A+R +    P+  F
Sbjct: 173 LVGLTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGF 232

Query: 237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA 269
              +  +   V +L  D S Y++G+   VD+GA
Sbjct: 233 VPPE-DVADAVLWLASDESRYITGHQLPVDAGA 264

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  131 bits (331), Expect = 5e-37
 Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 54/271 (19%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR---------LKSLCDEINKQS 67
            D +VV+VTGA  GLGR + L  A+ G ++V      DR            + DEI    
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAG 62

Query: 68  GSSVRAMAVELDVSANGAAIENS---VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE 124
           G +V          AN  ++E+    V+ A +AFGR+D LVNNAG+    +S   ++EE+
Sbjct: 63  GKAV----------ANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRD-RSFAKMSEED 111

Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAG 182
           W+ +M+ +L GS+ V++     MR   + G +IN SS A    + GQ      Y+++K G
Sbjct: 112 WDLVMRVHLKGSFKVTRAAWPYMRK-QKFGRIINTSSAAGLYGNFGQ----ANYSAAKLG 166

Query: 183 LNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN-----NVASRTYPLRDFG 237
           L  ++  L++E   + I  N+I P    S +TE +M +D  +      VA          
Sbjct: 167 LLGLSNTLAIEGAKYNITCNTIAPAA-GSRMTETVMPEDLFDALKPEYVA---------- 215

Query: 238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
                   LV YL H+S E V+G +F V +G
Sbjct: 216 -------PLVLYLCHESCE-VTGGLFEVGAG 238

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  130 bits (328), Expect = 1e-36
 Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 12/201 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTGASSG+G      LA  G  +  AARRVDRL++L DE+  + G   +A+ +
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGG---KALVL 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
           ELDV  +   ++ +V++  EA GR+D LVNNAG+   G V+   D    +W  ++ TNL 
Sbjct: 58  ELDV-TDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVE---DADTTDWTRMIDTNLL 113

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G    +          N+ G+++NISS+A   R  +     Y ++K G+NA ++ L  E+
Sbjct: 114 GLMYTTHAALPHHLLRNK-GTIVNISSVAG--RVAVRNSAVYNATKFGVNAFSEGLRQEV 170

Query: 195 GVHKIRVNSICPGLFKSEITE 215
               +RV  I PG   +E+ +
Sbjct: 171 TERGVRVVVIEPGTVDTELRD 191

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  129 bits (327), Expect = 2e-36
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 11/254 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQ-SGSSVRAMA 75
           LD +  ++TGAS G+G     +    G  ++  AR  D L    DE+ ++     V  +A
Sbjct: 7   LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            ++    +  AI + V+  W     +  LVNNAG +   K+ +D TE+EW  I +TNL  
Sbjct: 67  ADVSDDEDRRAILDWVEDHW---DGLHILVNNAGGN-IRKAAIDYTEDEWRGIFETNLFS 122

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ +S+Y    ++  +   +++NI S++  +   +  G  Y  +KA L  MT+ L++E  
Sbjct: 123 AFELSRYAHPLLK-QHASSAIVNIGSVSGLT--HVRSGAPYGMTKAALLQMTRNLAVEWA 179

Query: 196 VHKIRVNSICPGLFKSEITEGLMKK-DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
              IRVN++ P   ++ +T G +   D+   V  RT P+R  G  +  + + V +L   +
Sbjct: 180 EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERT-PMRRVGEPE-EVAAAVAFLCMPA 237

Query: 255 SEYVSGNIFIVDSG 268
           + Y++G    VD G
Sbjct: 238 ASYITGQCIAVDGG 251

Length = 257

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  129 bits (327), Expect = 3e-36
 Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 21/262 (8%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K  +VTGA+SG+G      LA AG  +V      +  ++          +    + +  D
Sbjct: 2   KTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVA---GDAGGSVIYLPAD 58

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWL 138
           V+     I + +  A   FG +D LVNNAG+     +P+ +   E+W+ I+   LT ++ 
Sbjct: 59  VT-KEDEIADMIAAAAAEFGGLDILVNNAGIQHV--APIEEFPPEDWDRIIAVMLTSAFH 115

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
             +     M+     G +INI+S         P   AY ++K GL  +TK L+LE+  H 
Sbjct: 116 TIRAALPHMK-KQGWGRIINIASAHGL-VAS-PFKSAYVAAKHGLIGLTKVLALEVAEHG 172

Query: 199 IRVNSICPG-----LFKSEI-----TEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
           I VN+ICPG     L + +I     T G+ ++  +  V  +  P + F T D  +     
Sbjct: 173 ITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVD-EVAETAL 231

Query: 249 YLVHDSSEYVSGNIFIVDSGAT 270
           YL  D++  ++G   ++D G T
Sbjct: 232 YLASDAAAQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 3e-36
 Identities = 84/264 (31%), Positives = 130/264 (49%), Gaps = 15/264 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD++V +VTGA  GLG    L  A+AG  ++ AAR   +L  + ++I + +G   RA  
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQI-RAAGR--RAHV 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  D++ +  A      +A EAFGR+D +VNN G +      L  + ++       N+  
Sbjct: 64  VAADLA-HPEATAGLAGQAVEAFGRLDIVVNNVGGTMP-NPLLSTSTKDLADAFTFNVAT 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG--VAYASSKAGLNAMTKCLSLE 193
           +  ++      M + +  GSVINISS      G+L G    AY ++KA L   T+  +L+
Sbjct: 122 AHALTVAAVPLMLEHSGGGSVINISSTM----GRLAGRGFAAYGTAKAALAHYTRLAALD 177

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVH 252
           L   +IRVN+I PG   +   E +   D L     +  PLR  G  DP  + +   YL  
Sbjct: 178 LC-PRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLG--DPEDIAAAAVYLAS 234

Query: 253 DSSEYVSGNIFIVDSGATLPGLPI 276
            +  Y++G    VD G T P L +
Sbjct: 235 PAGSYLTGKTLEVDGGLTFPNLDL 258

Length = 263

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  129 bits (325), Expect = 4e-36
 Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 18/260 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVE 77
           +KV ++TGA+ G+GR     LA  G  IV A   ++   KS   EI++   ++V   AV 
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAV---AVG 58

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV+ +   +E  + +A E FG  D +VNNAG+   +   L +TEE+   +   N+ G  
Sbjct: 59  ADVT-DKDDVEALIDQAVEKFGSFDVMVNNAGI-APITPLLTITEEDLKKVYAVNVFGVL 116

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
              +    + +     G +IN SSIA       P   AY++SK  +  +T+  + EL   
Sbjct: 117 FGIQAAARQFKKLGHGGKIINASSIAG--VQGFPNLGAYSASKFAVRGLTQTAAQELAPK 174

Query: 198 KIRVNSICPGLFKSE----ITEGLMKKD-----WLNNVASRTYPLRDFGTTDPALTSLVR 248
            I VN+  PG+ K+E    I E + +             S + PL      +  +  LV 
Sbjct: 175 GITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPED-VAGLVS 233

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L  + S+Y++G   +VD G
Sbjct: 234 FLASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 5e-36
 Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 10/192 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  KV ++TG S G+G      L   G ++   AR    L+    E+N +       + 
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG----NVLG 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  DV  + A ++ +V     AFG +D L+ NAGV G      +LT EEW  ++ TNLTG
Sbjct: 59  LAADVR-DEADVQRAVDAIVAAFGGLDVLIANAGV-GHFAPVEELTPEEWRLVIDTNLTG 116

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++   K     ++     G +INISS+A T+     GG AY +SK GL   ++   L+L 
Sbjct: 117 AFYTIKAAVPALK--RGGGYIINISSLAGTN--FFAGGAAYNASKFGLVGFSEAAMLDLR 172

Query: 196 VHKIRVNSICPG 207
            + I+V++I PG
Sbjct: 173 QYGIKVSTIMPG 184

Length = 237

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  128 bits (324), Expect = 6e-36
 Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 15/263 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K  ++TGA  G+G       A+ G  ++        ++ L DE+    G   R  A
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADEL---CGRGHRCTA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DV  + A++  ++++A E  GRID LVNNAGV   + S LD+++E+ +  +  N+ G
Sbjct: 59  VVADV-RDPASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKG 116

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            W V+K V   M  A ++G ++ +SS+        PG  AYA +KA +  +TK L++E  
Sbjct: 117 VWNVTKAVLPEMI-ARKDGRIVMMSSVTGDMVAD-PGETAYALTKAAIVGLTKSLAVEYA 174

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS------RTYPLRDFGTTDPALTSLVRY 249
              IRVN+ICPG  ++ + E + ++    +  S      +  PLR        +  L  +
Sbjct: 175 QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPL-EVGELAAF 233

Query: 250 LVHDSSEYVSGNIFIVDSGATLP 272
           L  D S Y++G   ++D G+TLP
Sbjct: 234 LASDESSYLTGTQNVIDGGSTLP 256

Length = 263

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  128 bits (323), Expect = 6e-36
 Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 20/259 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGA +G+G      LA+ G R+V A       +++  +I      +  A+A+
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI------AGGALAL 54

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +DV+ +   +    ++A E FG +D LVNNAG      + +D     W+  M  NL G+
Sbjct: 55  RVDVT-DEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L  ++   RM  A   GS++N+SSIA       PG  AY +SKA +  +T+ L+ EL  
Sbjct: 114 FLCCRHAAPRMI-ARGGGSIVNLSSIAGQ--SGDPGYGAYGASKAAIRNLTRTLAAELRH 170

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-------RDFGTTDPALTSLVRY 249
             IR N++ PGL  + +    +   +   +    + L       R     D A  + V +
Sbjct: 171 AGIRCNALAPGLIDTPLLLAKL-AGFEGALGPGGFHLLIHQLQGRLGRPEDVA--AAVVF 227

Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L+ D + +++G +  VD G
Sbjct: 228 LLSDDASFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 9e-36
 Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 17/260 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMA 75
           L+ KVV++TG S+GLGR   +   K   ++V   R   +    + +EI K  G    A+A
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG---EAIA 61

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DV+   + + N +Q A + FG +D ++NNAG+  AV S  +++ E+WN ++ TNLTG
Sbjct: 62  VKGDVTVE-SDVVNLIQTAVKEFGTLDVMINNAGIENAVPSH-EMSLEDWNKVINTNLTG 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG--VAYASSKAGLNAMTKCLSLE 193
           ++L S+       + + +G++IN+SS+      Q+P    V YA+SK G+  MT+ L++E
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSSV----HEQIPWPLFVHYAASKGGVKLMTETLAME 175

Query: 194 LGVHKIRVNSICPGLFKSEI-TEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLV 251
                IRVN+I PG   + I  E         +V S   P+   G   P  + ++  +L 
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMI-PMGYIG--KPEEIAAVAAWLA 232

Query: 252 HDSSEYVSGNIFIVDSGATL 271
              + YV+G     D G TL
Sbjct: 233 SSEASYVTGITLFADGGMTL 252

Length = 261

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  133 bits (335), Expect = 2e-35
 Identities = 83/253 (32%), Positives = 133/253 (52%), Gaps = 12/253 (4%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +VV+VTGA+ G+GR  C   A+AG ++V A R V+R      E     G      A+ +D
Sbjct: 6   RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER----ARERADSLGP--DHHALAMD 59

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWL 138
           VS   A I    ++    FGRID LVNNAGV+    +  LD T EE+  +   NLTG++L
Sbjct: 60  VSDE-AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYL 118

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           V++     M +     +++N++S A      LP   AY++SKA + ++T+ L+ E     
Sbjct: 119 VAREALRLMIEQGHGAAIVNVASGAGLV--ALPKRTAYSASKAAVISLTRSLACEWAAKG 176

Query: 199 IRVNSICPGLFKSEITEGLMKKDWLN-NVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY 257
           IRVN++ PG  ++++   L +   L+ +      PL   G  +  +   V +L  D + Y
Sbjct: 177 IRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPE-EIAEAVFFLASDQASY 235

Query: 258 VSGNIFIVDSGAT 270
           ++G+  +VD G T
Sbjct: 236 ITGSTLVVDGGWT 248

Length = 520

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 2e-35
 Identities = 85/269 (31%), Positives = 138/269 (51%), Gaps = 30/269 (11%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            KVV++TG SSG+G+      A+ G  +V   R  ++L+    EI +  G   + + V++
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG---QVLTVQM 57

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSW 137
           DV  N   ++  V++  E FGRIDAL+NNA  +G    P  DL+   WN ++   L G++
Sbjct: 58  DVR-NPEDVQKMVEQIDEKFGRIDALINNA--AGNFICPAEDLSVNGWNSVIDIVLNGTF 114

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV- 196
             S+ V     +   +G++IN+ +  A   G  PG +  A++KAG+ AMT+ L++E G  
Sbjct: 115 YCSQAVGKYWIEKGIKGNIINMVATYAWDAG--PGVIHSAAAKAGVLAMTRTLAVEWGRK 172

Query: 197 HKIRVNSICPG----------LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
           + IRVN+I PG          L++SE       K  + +V     PL   GT +  +  L
Sbjct: 173 YGIRVNAIAPGPIERTGGADKLWESE----EAAKRTIQSV-----PLGRLGTPE-EIAGL 222

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATLPGLP 275
             +L+ D + Y++G    +D G  L   P
Sbjct: 223 AYFLLSDEAAYINGTCITMDGGQWLNQYP 251

Length = 252

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  128 bits (323), Expect = 2e-35
 Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 30/274 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  KV ++TG    LG     +LA+AG ++    R  ++ +++  EI    G    A+A
Sbjct: 7   SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG---EALA 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGA------------VKSPLDLT 121
           V+ DV  +  ++E + Q+  E FG  D L+N AG     A             K+  DL 
Sbjct: 64  VKADVL-DKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLD 122

Query: 122 EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKA 181
           EE +  +   NL G+ L ++     M    + G++INISS+ A +   L    AY+++KA
Sbjct: 123 EEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINISSMNAFT--PLTKVPAYSAAKA 179

Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK------DWLNNVASRTYPLRD 235
            ++  T+ L++      IRVN+I PG F +E    L+        +  N + + T P+  
Sbjct: 180 AISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT-PMGR 238

Query: 236 FGTTDPALTSLVRYLVHD-SSEYVSGNIFIVDSG 268
           FG  +  L +L+ +L  + +S +V+G +  VD G
Sbjct: 239 FGKPEELLGTLL-WLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 5e-35
 Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 8/191 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KVV+V+G   GLGR   +  A+AG  +V AAR  +RL  +  EI+       RA+AV
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEID---DLGRRALAV 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D++ +     N V  A E FGR+DALVNNA    ++K   D     W  +++ N+ G+
Sbjct: 60  PTDIT-DEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGT 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +++     +  A   GS++ I+S+    R   P   AY  +K  L A ++ L+ ELG 
Sbjct: 119 LRLTQAFTPAL--AESGGSIVMINSMVL--RHSQPKYGAYKMAKGALLAASQSLATELGP 174

Query: 197 HKIRVNSICPG 207
             IRVNS+ PG
Sbjct: 175 QGIRVNSVAPG 185

Length = 258

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 5e-35
 Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 14/258 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  K+ +VTGAS G+G      LA+ G  ++ ++R++D  +++ D I   +G    A+A
Sbjct: 5   DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAI-VAAGGKAEALA 63

Query: 76  V---ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
               E++       I+       E  GR+D LVNNA  +      LD     +   +  N
Sbjct: 64  CHIGEME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVN 117

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           + G + +S      M+     GS++N++S+   S G   G   Y+ +KA + +MTK  + 
Sbjct: 118 IRGYFFMSVEAGKLMK-EQGGGSIVNVASVNGVSPGDFQG--IYSITKAAVISMTKAFAK 174

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           E     IRVN++ PGL  ++    L K D +   A    PLR        +   V YL  
Sbjct: 175 ECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPS-EMAGAVLYLAS 233

Query: 253 DSSEYVSGNIFIVDSGAT 270
           D+S Y +G    VD G  
Sbjct: 234 DASSYTTGECLNVDGGYL 251

Length = 252

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 5e-35
 Identities = 68/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTGA+ G+G       A+ G  +  A       +     I  +  +  R +AV
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAI-ARDVAGARVLAV 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV  + A++  +V  A EAFG +D LVNNAG++     PL +T+E+W      +L G+
Sbjct: 64  PADV-TDAASVAAAVAAAEEAFGPLDVLVNNAGIN-VFADPLAMTDEDWRRCFAVDLDGA 121

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           W   + V   M      GS++NI+S  A     +PG   Y  +K GL  +T+ L +E   
Sbjct: 122 WNGCRAVLPGMV-ERGRGSIVNIASTHAFK--IIPGCFPYPVAKHGLLGLTRALGIEYAA 178

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLN 224
             +RVN+I PG  ++++TE     DW N
Sbjct: 179 RNVRVNAIAPGYIETQLTE-----DWWN 201

Length = 260

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 1e-34
 Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 28/266 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD   V+VTG +SG+GR      A+AG R+         L +    +     ++  A   
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVA--- 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+ + A +E     A E FG +D LVNNAG++G      ++T E+W   +  NL G 
Sbjct: 66  --DVA-DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQ 122

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  ++     ++ +   G +I +SS+A   R   PG   YA+SK  +  + K L++ELG 
Sbjct: 123 FYFARAAVPLLKASGHGGVIIALSSVAG--RLGYPGRTPYAASKWAVVGLVKSLAIELGP 180

Query: 197 HKIRVNSICPGLFKSE------------ITEGL--MKKDWLNNVASRTYPLRDFGTTDPA 242
             IRVN+I PG+ +              +  GL  M++++L  +      L      +  
Sbjct: 181 LGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKI-----SLGRMVEPE-D 234

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSG 268
           + +   +L   ++ Y++G    VD  
Sbjct: 235 IAATALFLASPAARYITGQAISVDGN 260

Length = 264

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  125 bits (315), Expect = 2e-34
 Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 7/200 (3%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            +  K  ++TGASSG+G E    LA+ G  ++  ARR D+L++L  E+  ++G  V  + 
Sbjct: 3   PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIP 62

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            +L   ++  A+E    +  E  G ID LVNNAG  G     L+L+ +E   +++ N+  
Sbjct: 63  ADL---SDPEALERLEDELKERGGPIDVLVNNAGF-GTFGPFLELSLDEEEEMIQLNILA 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              ++K V   M +    G +INI S A       P    Y+++KA + + ++ L  EL 
Sbjct: 119 LTRLTKAVLPGMVERGA-GHIINIGSAAGLI--PTPYMAVYSATKAFVLSFSEALREELK 175

Query: 196 VHKIRVNSICPGLFKSEITE 215
              ++V ++CPG  ++E  +
Sbjct: 176 GTGVKVTAVCPGPTRTEFFD 195

Length = 265

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  123 bits (311), Expect = 3e-34
 Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 27/261 (10%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D KV ++T A+ G+GR   L  A+ G  ++A          + +E  K+           
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIAT--------DINEEKLKELERGPGITTRV 52

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNLTG 135
           LDV+ +   +    ++     GRID L N AG    G++   LD  +++W+  M  N+  
Sbjct: 53  LDVT-DKEQVAALAKE----EGRIDVLFNCAGFVHHGSI---LDCEDDDWDFAMNLNVRS 104

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L+ K V  +M  A ++GS+IN+SS+A++ +G +P    Y+++KA +  +TK ++ +  
Sbjct: 105 MYLMIKAVLPKML-ARKDGSIINMSSVASSIKG-VPNRFVYSTTKAAVIGLTKSVAADFA 162

Query: 196 VHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
              IR N+ICPG   +   E  ++     ++ L   A+R  PL    T +  + +L  YL
Sbjct: 163 QQGIRCNAICPGTVDTPSLEERIQAQPDPEEALKAFAARQ-PLGRLATPE-EVAALAVYL 220

Query: 251 VHDSSEYVSGNIFIVDSGATL 271
             D S YV+G   ++D G +L
Sbjct: 221 ASDESAYVTGTAVVIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  123 bits (312), Expect = 3e-34
 Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 34/270 (12%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
             V +VTG +SGLG      L   G ++V      D   S        +        V +
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVIL----DLPNS---PGETVAKLGDNCRFVPV 54

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK-------SPLDLTEEEWNHIMKT 131
           DV+ +   ++ ++  A   FGR+D +VN AG++ A K        P  L  E +  ++  
Sbjct: 55  DVT-SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSL--ELFQRVINV 111

Query: 132 NLTGSWLVSKYVCIRMR-----DANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
           NL G++ V +     M         + G +IN +S+AA   GQ  G  AY++SK G+  M
Sbjct: 112 NLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFE-GQ-IGQAAYSASKGGIVGM 169

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK--DWLNNVASRTYPLRDFGTTDPA-L 243
           T  ++ +L    IRV +I PGLF + +  GL +K  D+L       +P R  G  DPA  
Sbjct: 170 TLPIARDLAPQGIRVVTIAPGLFDTPLLAGLPEKVRDFLAKQVP--FPSR-LG--DPAEY 224

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGATLPG 273
             LV++++   + Y++G +  +D    +P 
Sbjct: 225 AHLVQHII--ENPYLNGEVIRLDGAIRMPP 252

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  124 bits (312), Expect = 4e-34
 Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 15/257 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V +VTG++ GLG E    LA AG  ++   R    L++    +    G+   A A+
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA---AEAL 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             D+ A+  A+  +  +     GR+D LVNN G     + PL +L +     +++T+L  
Sbjct: 66  AFDI-ADEEAVAAAFARIDAEHGRLDILVNNVGARD--RRPLAELDDAAIRALLETDLVA 122

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLE 193
             L+S+    RM+     G +I I+SIA    GQ+   G   Y ++K GL  + + L+ E
Sbjct: 123 PILLSRLAAQRMK-RQGYGRIIAITSIA----GQVARAGDAVYPAAKQGLTGLMRALAAE 177

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
            G H I  N+I PG F +E    +     +    ++  PL  +G  +    + V +L   
Sbjct: 178 FGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAV-FLASP 236

Query: 254 SSEYVSGNIFIVDSGAT 270
           ++ YV+G++  VD G +
Sbjct: 237 AASYVNGHVLAVDGGYS 253

Length = 256

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  123 bits (311), Expect = 5e-34
 Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 27/268 (10%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            V +VTG   G+G      LA AG  + +      + L +   E+       V  +    
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQEL---RALGVEVIFFPA 59

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSW 137
           DV A+ +A E  +  A  A+GRID LVNNAGV   V+   LDLT E ++ ++  NL G +
Sbjct: 60  DV-ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPF 118

Query: 138 LVSKYVCIRMRDANQ-----EGSVINISSIAAT----SRGQLPGGVAYASSKAGLNAMTK 188
            +++ V  RM    +       S++ +SS+ A     +RG+      Y  SKAGL+   +
Sbjct: 119 FLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE------YCISKAGLSMAAQ 172

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKK-DWLNNVASRTYPLRDFGTTDPA-LTSL 246
             +  L    I V  + PGL K+++T  +  K D L  +A    P+  +G   P  +   
Sbjct: 173 LFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDAL--IAKGLVPMPRWGE--PEDVARA 228

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATLPGL 274
           V  L      Y +G    VD G ++P L
Sbjct: 229 VAALASGDLPYSTGQAIHVDGGLSIPRL 256

Length = 256

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score =  122 bits (309), Expect = 6e-34
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 16/198 (8%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V++TGASSG+GR    + AKAG  +  AARR DRL  L  E+   + S        LDV+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPS---VEVEILDVT 57

Query: 82  ANGAAIENSVQKAWEAF----GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
                 E   Q          G +D ++ NAGV     S  DL+ + +   + TNL G+ 
Sbjct: 58  D-----EERNQLVIAELEAELGGLDLVIINAGVGKG-TSLGDLSFKAFRETIDTNLLGAA 111

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            + +    + R   + G ++ ISS+AA  RG LPG  AY++SKA L+++ + L  ++   
Sbjct: 112 AILEAALPQFRAKGR-GHLVLISSVAAL-RG-LPGAAAYSASKAALSSLAESLRYDVKKR 168

Query: 198 KIRVNSICPGLFKSEITE 215
            IRV  I PG   + +T 
Sbjct: 169 GIRVTVINPGFIDTPLTA 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  122 bits (308), Expect = 1e-33
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 13/254 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +  G   +A A
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFA 64

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              D+++    +      A    G++D LVNNAG  G    P D+   ++    + N+  
Sbjct: 65  CRCDITSE-QELSALADFALSKLGKVDILVNNAG--GGGPKPFDMPMADFRRAYELNVFS 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + +S+ V   M + N  G ++ I+S+AA ++       +YASSKA  + + + ++ +LG
Sbjct: 122 FFHLSQLVAPEM-EKNGGGVILTITSMAAENKNI--NMTSYASSKAAASHLVRNMAFDLG 178

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT-TDPALTSLVRYLVHDS 254
              IRVN I PG   ++  + ++  +    +   T P+R  G   D A  +L  +L   +
Sbjct: 179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT-PIRRLGQPQDIANAAL--FLCSPA 235

Query: 255 SEYVSGNIFIVDSG 268
           + +VSG I  V  G
Sbjct: 236 ASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  122 bits (307), Expect = 2e-33
 Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 15/258 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGA SG G       A+ G R+V A    D  + +  +I +       A+A+
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEA------AIAI 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + DV+   A +E  V+ A   FGR+D LVNNAG++   K  L++ EEE++ +   N+   
Sbjct: 57  QADVT-KRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSI 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L ++ +   M +    G +INI+S A       PG   Y +SK  +   TK +++EL  
Sbjct: 116 YLSAQALVPHMEE-QGGGVIINIASTAGLR--PRPGLTWYNASKGWVVTATKAMAVELAP 172

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVA--SRTYPLRDFGT-TDPALTSLVRYLVHD 253
             IRVN +CP   ++ +    M +D   N A    T PL    T  D A  +L  YL  D
Sbjct: 173 RNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAAL--YLASD 230

Query: 254 SSEYVSGNIFIVDSGATL 271
            + +++G    VD G  +
Sbjct: 231 EASFITGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  122 bits (308), Expect = 2e-33
 Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 29/273 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L NKV ++TG +  LG      LA+AG ++ A  R  ++   +  EI    G   RA+A
Sbjct: 2   SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGG---RAIA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAG-------------VSGAVKSPLDLTE 122
           +  DV  + A++E + ++    FG +D L+N AG                  ++  DL E
Sbjct: 59  LAADV-LDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDE 117

Query: 123 EEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKA 181
           E W  +   NL GS+L S+     M +  + GS+INISS+ A +   ++P   AY+++KA
Sbjct: 118 EGWEFVFDLNLNGSFLPSQVFGKDMLEQ-KGGSIINISSMNAFSPLTKVP---AYSAAKA 173

Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL------MKKDWLNNVASRTYPLRD 235
            ++  T+ L++E     +RVN+I PG F +     L         D  N +  RT P+  
Sbjct: 174 AVSNFTQWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRT-PMGR 232

Query: 236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           FG  +  L +L+      +S +V+G +  VD G
Sbjct: 233 FGKPEELLGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  121 bits (306), Expect = 2e-33
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 24/256 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRVDRLKSLCDEINKQSGSSVRAM 74
           ++ +VTG   G+G   C  LAK G R+ A       R    L+          G   R  
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQ-----GALGFDFR-- 53

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTN 132
            VE DVS+  +    +V K     G ID LVNNAG++     K    +T E+W+ ++ TN
Sbjct: 54  VVEGDVSSFESCKA-AVAKVEAELGPIDVLVNNAGITRDATFKK---MTYEQWSAVIDTN 109

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L   + V++ V   MR+    G +INISS+    +GQ  G   Y+++KAG+   TK L+ 
Sbjct: 110 LNSVFNVTQPVIDGMRERGW-GRIINISSVNGQ-KGQF-GQTNYSAAKAGMIGFTKALAQ 166

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           E     + VN+I PG   +++    M++D LN++ +   P+   G  +  + + V +L  
Sbjct: 167 EGATKGVTVNTISPGYIATDMVMA-MREDVLNSIVA-QIPVGRLGRPE-EIAAAVAFLAS 223

Query: 253 DSSEYVSGNIFIVDSG 268
           + + Y++G    ++ G
Sbjct: 224 EEAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  121 bits (305), Expect = 3e-33
 Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  ++TGA  G+GR   + LAK G  +   AR  + LK++ +E+ +  G  V+ +  
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV-EAYG--VKVVIA 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS +   +  ++++     G ID L+NNAG+       L+L   EW  I++ NL G 
Sbjct: 62  TADVS-DYEEVTAAIEQLKNELGSIDILINNAGI-SKFGKFLELDPAEWEKIIQVNLMGV 119

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  ++ V   M +    G +INISS A   +G      AY++SK G+  +T+ L  E+  
Sbjct: 120 YYATRAVLPSMIERQS-GDIINISSTAG-QKGA-AVTSAYSASKFGVLGLTESLMQEVRK 176

Query: 197 HKIRVNSICPGLFKSEITEGLMKKD 221
           H IRV ++ P    +++   L   D
Sbjct: 177 HNIRVTALTPSTVATDMAVDLGLTD 201

Length = 239

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  121 bits (304), Expect = 3e-33
 Identities = 85/259 (32%), Positives = 122/259 (47%), Gaps = 29/259 (11%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA--- 75
            KV +VTG   G+G++ CLD  +AG ++V A            +I+++ G+         
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFA------------DIDEERGADFAEAEGPN 48

Query: 76  ---VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
              V  DV A+   ++  V    E  GRID LVNNA   G+      L  EEW+ I+  N
Sbjct: 49  LFFVHGDV-ADETLVKFVVYAMLEKLGRIDVLVNNAAR-GSKGILSSLLLEEWDRILSVN 106

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG + +S+Y    +      G +INI+S  A      P   AYA+SK GL A+T  L++
Sbjct: 107 LTGPYELSRYCRDELIKNK--GRIINIASTRAFQSE--PDSEAYAASKGGLVALTHALAM 162

Query: 193 ELGVHKIRVNSICPGLFK-SEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
            LG   IRVN I PG    +E  E       L       +P    GT    + +LV +L 
Sbjct: 163 SLGPD-IRVNCISPGWINTTEQQEFTAAP--LTQEDHAQHPAGRVGTPKD-IANLVLFLC 218

Query: 252 HDSSEYVSGNIFIVDSGAT 270
              + +++G  FIVD G T
Sbjct: 219 QQDAGFITGETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  121 bits (305), Expect = 3e-33
 Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 16/255 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGA++GLG+   + LA+AG  IV A R         +   +      R +++
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS-----EPSETQQQVEALGRRFLSL 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+S    AI+  V  A E FG ID LVNNAG+     +  + +E++W+ +M  NL   
Sbjct: 58  TADLSDIE-AIKALVDSAVEEFGHIDILVNNAGIIRRADA-EEFSEKDWDDVMNVNLKSV 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV---AYASSKAGLNAMTKCLSLE 193
           + +++          + G +INI+S+ +       GG+   +Y +SK  +  +TK L+ E
Sbjct: 116 FFLTQAAAKHFLKQGRGGKIINIASMLS-----FQGGIRVPSYTASKHAVAGLTKLLANE 170

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                I VN+I PG   +  T+ L   +  N       P   +GT D      V +L   
Sbjct: 171 WAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAV-FLASS 229

Query: 254 SSEYVSGNIFIVDSG 268
           +S+YV+G    VD G
Sbjct: 230 ASDYVNGYTLAVDGG 244

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  119 bits (300), Expect = 1e-32
 Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 12/196 (6%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           KV +VTGA+ G+G E    LAK+G   ++  AR V+R ++  +++ +  G SVR    +L
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKL-RAEGLSVRF--HQL 57

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DV  + A+IE +     E +G +D LVNNAG++         T E+    MKTN  G+  
Sbjct: 58  DV-TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVD 116

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           V++ +   ++ +   G ++N+SS      G L    AY  SKA LNA+T+ L+ EL    
Sbjct: 117 VTQALLPLLKKSPA-GRIVNVSSGL----GSL--TSAYGVSKAALNALTRILAKELKETG 169

Query: 199 IRVNSICPGLFKSEIT 214
           I+VN+ CPG  K+++ 
Sbjct: 170 IKVNACCPGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  119 bits (301), Expect = 1e-32
 Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 22/261 (8%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +KVV++TG  SGLG    + LAK G ++       + L++    +  +       + ++ 
Sbjct: 3   DKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAAL-LEIAPDAEVLLIKA 61

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DVS + A +E  V    E FGRID   NNAG+ G      D   +E++ ++  NL G + 
Sbjct: 62  DVS-DEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRG---QLPGGVAYASSKAGLNAMTKCLSLELG 195
             + V   MR+    G ++N +S+    RG   Q      YA++K G+  +T+  ++E G
Sbjct: 121 GLEKVLKVMRE-QGSGMIVNTASVGGI-RGVGNQSG----YAAAKHGVVGLTRNSAVEYG 174

Query: 196 VHKIRVNSICPGLFKSEITEGLMKK----DWLNNVASRTY----PLRDFGTTDPALTSLV 247
            + IR+N+I PG   + + EG +K+    +     A   +    P++ FG     + ++V
Sbjct: 175 QYGIRINAIAPGAILTPMVEGSLKQLGPENP--EEAGEEFVSVNPMKRFGEP-EEVAAVV 231

Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L+ D + YV+  +  +D G
Sbjct: 232 AFLLSDDAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 2e-32
 Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 18/256 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA--RRVDRLKSLCDEINKQSGSSVRAM 74
           LD KV +VTG ++GLG+ + + LAKAG  I+        D  + L ++  +      +  
Sbjct: 13  LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGR------KVT 66

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNL 133
            V++D++   +A E  V++A E FG+ID LVNNAG     ++PL +  +E+WN +M  NL
Sbjct: 67  FVQVDLTKPESA-EKVVKEALEEFGKIDILVNNAGT--IRRAPLLEYKDEDWNAVMDINL 123

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL-PGGVAYASSKAGLNAMTKCLSL 192
              + +S+ V   M      G +INI+S+ +   G+  P   AY +SK G+  +TK  + 
Sbjct: 124 NSVYHLSQAVAKVMAKQGS-GKIINIASMLSFQGGKFVP---AYTASKHGVAGLTKAFAN 179

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           EL  + I+VN+I PG  K+  T  +      N+   +  P   +G  D  L     +L  
Sbjct: 180 ELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDD-LMGAAVFLAS 238

Query: 253 DSSEYVSGNIFIVDSG 268
            +S+YV+G+I  VD G
Sbjct: 239 RASDYVNGHILAVDGG 254

Length = 258

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  119 bits (300), Expect = 2e-32
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 35/259 (13%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            K V++TGA+SG+G          G ++      VD+          +   S     ++L
Sbjct: 5   TKTVLITGAASGIGLAQARAFLAQGAQVYG----VDK--------QDKPDLSGNFHFLQL 52

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           D+S +   + + V         +D L N AG+    K  LD + EEW HI  TNLT ++L
Sbjct: 53  DLSDDLEPLFDWVPS-------VDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFL 105

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           +++    +M    + G +IN+ SIA+   G   GG AY +SK  L   TK L+L+     
Sbjct: 106 LTRAYLPQML-ERKSGIIINMCSIASFVAGG--GGAAYTASKHALAGFTKQLALDYAKDG 162

Query: 199 IRVNSICPGLFK-----SEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVH 252
           I+V  I PG  K     ++   G +   W   VA  T P++ +   +P  +  L  +L  
Sbjct: 163 IQVFGIAPGAVKTPMTAADFEPGGLAD-W---VARET-PIKRW--AEPEEVAELTLFLAS 215

Query: 253 DSSEYVSGNIFIVDSGATL 271
             ++Y+ G I  +D G TL
Sbjct: 216 GKADYMQGTIVPIDGGWTL 234

Length = 235

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  118 bits (299), Expect = 3e-32
 Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 23/261 (8%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V+VTGA+ G+G      LA+AG R+ A  R  ++L  L  +              +LDV+
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVAD---LRRYGYPFATYKLDVA 57

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
            + AA++  VQ+    +G ID LVN AG+   GA+ S   L++E+W      N  G + V
Sbjct: 58  -DSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDS---LSDEDWQATFAVNTFGVFNV 113

Query: 140 SKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           S+ V  RM+   + G+++ + S AA   R    G  AYA+SKA L  +TKCL LEL  + 
Sbjct: 114 SQAVSPRMK-RRRSGAIVTVGSNAANVPR---MGMAAYAASKAALTMLTKCLGLELAPYG 169

Query: 199 IRVNSICPGLFKSEITEGLMKKDW-LNNV---ASRTY----PLRDFGTTDPALTSLVRYL 250
           IR N + PG   +E+   L   ++    V   +   +    PL         + + V +L
Sbjct: 170 IRCNVVSPGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSD-IANAVLFL 228

Query: 251 VHDSSEYVSGNIFIVDSGATL 271
             D + +++ +  +VD GATL
Sbjct: 229 ASDLASHITMHDLVVDGGATL 249

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  118 bits (297), Expect = 5e-32
 Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 14/198 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI---NKQSGSSVRAMAV 76
           K V++TG SSG+G+    +L K G  ++  AR   +L+   +EI      SG  V  ++ 
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L   ++   +E +  +A E  G  D +VN AG+S       DLT EE+   M  N  GS
Sbjct: 62  DL---SDYEEVEQAFAQAVEKGGPPDLVVNCAGISIP-GLFEDLTAEEFERGMDVNYFGS 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP--GGVAYASSKAGLNAMTKCLSLEL 194
             V+  V   M    + G ++ +SS A      +   G  AY  SK  L  + + L  EL
Sbjct: 118 LNVAHAVLPLM-KEQRPGHIVFVSSQA----ALVGIYGYSAYCPSKFALRGLAESLRQEL 172

Query: 195 GVHKIRVNSICPGLFKSE 212
             + IRV+ + P    + 
Sbjct: 173 KPYNIRVSVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  117 bits (296), Expect = 7e-32
 Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 14/252 (5%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC--DEINKQSGSSVRAMAV 76
            K+ +VTGA  G+G     +L   G R++A         + C  D   +   +  +    
Sbjct: 2   KKIALVTGAKRGIGSAIARELLNDGYRVIAT----YFSGNDCAKDWFEEYGFTEDQVRLK 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           ELDV  +      ++ +  E  G +D LVNNAG++        ++ +EWN ++ TNL   
Sbjct: 58  ELDV-TDTEECAEALAEIEEEEGPVDILVNNAGITRD-SVFKRMSHQEWNDVINTNLNSV 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + V++ +   M +    G +INISS+    +GQ  G   Y+++KAG+   TK L+ E   
Sbjct: 116 FNVTQPLFAAMCEQGY-GRIINISSVNGL-KGQF-GQTNYSAAKAGMIGFTKALASEGAR 172

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           + I VN I PG   + + E  M  + L ++ ++  P++  GT +  + + V +LV +++ 
Sbjct: 173 YGITVNCIAPGYIATPMVEQ-MGPEVLQSIVNQI-PMKRLGTPE-EIAAAVAFLVSEAAG 229

Query: 257 YVSGNIFIVDSG 268
           +++G    ++ G
Sbjct: 230 FITGETISINGG 241

Length = 245

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  117 bits (295), Expect = 8e-32
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 22  VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V++TGAS G+G E    L   G   ++A  R          E+     S  R   +ELDV
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAAT----ELAALGASHSRLHILELDV 56

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
           +   A    +V +       +D L+NNAG+  +     ++  E+   + + N+ G  L++
Sbjct: 57  TDEIAESAEAVAERLG-DAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 141 KYVCIRMRDANQEGSVINIS----SIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +   + +        +INIS    SI   + G   G  +Y +SKA LN +TK L++EL  
Sbjct: 116 QAF-LPLLLKGARAKIINISSRVGSIGDNTSG---GWYSYRASKAALNMLTKSLAVELKR 171

Query: 197 HKIRVNSICPGLFKSEITEG 216
             I V S+ PG  ++++   
Sbjct: 172 DGITVVSLHPGWVRTDMGGP 191

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  117 bits (295), Expect = 8e-32
 Identities = 79/258 (30%), Positives = 128/258 (49%), Gaps = 12/258 (4%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD KV ++TG +SG+G       AK G R+V A    D  +++  E+     S V    
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHC-- 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLT 134
              DV+   A +  +V  A   FGR+D + NNAGV GA   S L+ + EE+  ++  N+ 
Sbjct: 59  ---DVT-VEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVY 114

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++L +K+    M  A ++GS+++++S+A    G  P   AY +SK  +  +T+  + EL
Sbjct: 115 GAFLGTKHAARVMIPA-KKGSIVSVASVAGVVGGLGPH--AYTASKHAVLGLTRSAATEL 171

Query: 195 GVHKIRVNSICPGLFKSEIT--EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           G H IRVN + P    + +      ++ + +         L+        + + V YL  
Sbjct: 172 GEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLAS 231

Query: 253 DSSEYVSGNIFIVDSGAT 270
           D S YVSG   +VD G T
Sbjct: 232 DDSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  117 bits (296), Expect = 9e-32
 Identities = 81/268 (30%), Positives = 133/268 (49%), Gaps = 29/268 (10%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           V +VTGAS G+GR    +LA  G  I +      D+   +  E+        RA+  + D
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGR---RAIYFQAD 59

Query: 80  V---SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTG 135
           +   S + A ++    +AWE FGR+D LVNNAG++   +   LDLTE+ ++ ++  NL G
Sbjct: 60  IGELSDHEALLD----QAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRG 115

Query: 136 SWLVSKYVCIRM-----RDANQEGSVINISSIAA----TSRGQLPGGVAYASSKAGLNAM 186
            + +++ V  RM     R      S+I ++SI A     +RG+      Y  SKAGL+  
Sbjct: 116 PFFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGE------YCISKAGLSMA 169

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
           T+ L+  L    I V+ I PGL  +++T  + +K +   +A+   P+R +G  +  +   
Sbjct: 170 TRLLAYRLADEGIAVHEIRPGLIHTDMTAPVKEK-YDELIAAGLVPIRRWGQPED-IAKA 227

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATLPGL 274
           VR L      Y +G    +D G ++  L
Sbjct: 228 VRTLASGLLPYSTGQPINIDGGLSMRRL 255

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 1e-31
 Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 15/259 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  ++TGAS+G+G+   L   +AG ++  AAR +D L+ L DEI    G   + + V
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG---KVVPV 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS     + + + +     G ID  V NAG+   V   LD+  EE+  +  TN+TG 
Sbjct: 64  CCDVS-QHQQVTSMLDQVTAELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGV 121

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA-YASSKAGLNAMTKCLSLELG 195
           +L ++     M    Q G +IN +S++      +P  V+ Y +SKA +  +TK +++EL 
Sbjct: 122 FLTAQAAAKAMVKQGQGGVIINTASMSGHII-NVPQQVSHYCASKAAVIHLTKAMAVELA 180

Query: 196 VHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
            HKIRVNS+ PG   +E+ E   +    W   +     PL   G  +  L  L  YL  +
Sbjct: 181 PHKIRVNSVSPGYILTELVEPYTEYQPLWEPKI-----PLGRLGRPE-ELAGLYLYLASE 234

Query: 254 SSEYVSGNIFIVDSGATLP 272
           +S Y++G+  ++D G T P
Sbjct: 235 ASSYMTGSDIVIDGGYTCP 253

Length = 253

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 1e-31
 Identities = 77/259 (29%), Positives = 134/259 (51%), Gaps = 23/259 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K +++TG++ G+G      LA+ G  I+      +R +    ++ ++    ++A A 
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG---IKAHAA 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             +V+ +   +E +++   +  G ID L+NNAG+    + P  +  E+EWN ++  N T 
Sbjct: 64  PFNVT-HKQEVEAAIEHIEKDIGPIDVLINNAGIQR--RHPFTEFPEQEWNDVIAVNQTA 120

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAAT-SRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +LVS+ V   M    Q G +INI S+ +   R  +     YA+SK  +  +T+ + +EL
Sbjct: 121 VFLVSQAVARYMV-KRQAGKIINICSMQSELGRDTI---TPYAASKGAVKMLTRGMCVEL 176

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKK----DWLNNVASRTYPLRDFGTTDPA-LTSLVRY 249
             H I+VN I PG FK+E+T+ L++      WL     RT P   +G  DP  L     +
Sbjct: 177 ARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWL---CKRT-PAARWG--DPQELIGAAVF 230

Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L   +S++V+G++  VD G
Sbjct: 231 LSSKASDFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  116 bits (294), Expect = 1e-31
 Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 18/221 (8%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           +V++TG  SG+GR   L+ AK G ++V         +   + + K  G   +    + DV
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGG---KVHYYKCDV 57

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
           S     +  + +K  +  G +  L+NNAGV  + K  L+L +EE     + N    +  +
Sbjct: 58  S-KREEVYEAAKKIKKEVGDVTILINNAGV-VSGKKLLELPDEEIEKTFEVNTLAHFWTT 115

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK-- 198
           K     M      G ++ I+S+A        G   Y +SKA      + L LEL  +   
Sbjct: 116 KAFLPDML-ERNHGHIVTIASVAGLI--SPAGLADYCASKAAAVGFHESLRLELKAYGKP 172

Query: 199 -IRVNSICPGLFKSEITEGLMKKDWL-------NNVASRTY 231
            I+   +CP    + + +G+     L         VA +  
Sbjct: 173 GIKTTLVCPYFINTGMFQGVKTPRPLLAPILEPEYVAEKIV 213

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 2e-31
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 20/207 (9%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           N+V +V G    LG   C  LA+ G R+  A    ++  ++  EIN + G    A     
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG-EGMAYGFGA 60

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSW 137
           D + +  ++    +   E FGR+D LV NAG+  A  + + D    +++  ++ NL G +
Sbjct: 61  DAT-SEQSVLALSRGVDEIFGRVDLLVYNAGI--AKAAFITDFQLGDFDRSLQVNLVGYF 117

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV------AYASSKAGLNAMTKCLS 191
           L ++     M     +G +I I+S +        G V       Y+++K G   +T+ L+
Sbjct: 118 LCAREFSRLMIRDGIQGRIIQINSKS--------GKVGSKHNSGYSAAKFGGVGLTQSLA 169

Query: 192 LELGVHKIRVNSICPG-LFKSEITEGL 217
           L+L  + I V+S+  G L KS + + L
Sbjct: 170 LDLAEYGITVHSLMLGNLLKSPMFQSL 196

Length = 259

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  115 bits (291), Expect = 3e-31
 Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 10/251 (3%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDV 80
            +VTG S G+G+   L LA+ G  +V   R+  D    +  EI        +A+ V  DV
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEI---EELGGKAVVVRADV 57

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
           S     +E       E FGR+D LV+NA  +GA +   +LT   W+  M TNL      +
Sbjct: 58  SQ-PQDVEEMFAAVKERFGRLDVLVSNAA-AGAFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
           +     MR+    G ++ ISS+ +     LP  +A  ++KA L A+ + L++ELG   IR
Sbjct: 116 QQAAKLMRERG-GGRIVAISSLGSI--RALPNYLAVGTAKAALEALVRYLAVELGPRGIR 172

Query: 201 VNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSG 260
           VN++ PG+  ++       ++ L   A+   P    GT    +   V +L  D++  ++G
Sbjct: 173 VNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQD-VADAVGFLCSDAARMITG 231

Query: 261 NIFIVDSGATL 271
              +VD G ++
Sbjct: 232 QTLVVDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  115 bits (291), Expect = 4e-31
 Identities = 62/188 (32%), Positives = 106/188 (56%), Gaps = 10/188 (5%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTG +SG+G      LA  G  +V A    D    + +++ + +    RA+ V+ D
Sbjct: 2   KVALVTGGASGIGLAIAKRLAAEGAAVVVA----DIDPEIAEKVAEAAQGGPRALGVQCD 57

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWL 138
           V+ + A ++++ ++A   FG +D +V+NAG+  A  SP+ + + E+WN  M  NLTG +L
Sbjct: 58  VT-SEAQVQSAFEQAVLEFGGLDIVVSNAGI--ATSSPIAETSLEDWNRSMDINLTGHFL 114

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           VS+     M+     G+++  +S  A + G  P   AY+++KA    + +CL+LE G   
Sbjct: 115 VSREAFRIMKSQGIGGNIVFNASKNAVAPG--PNAAAYSAAKAAEAHLARCLALEGGEDG 172

Query: 199 IRVNSICP 206
           IRVN++ P
Sbjct: 173 IRVNTVNP 180

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 5e-31
 Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 24/222 (10%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            KV  +TGAS G GR +     + G R+VA AR    L  L ++         R + + L
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGD------RLLPLAL 56

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           DV+ + AA+  +V+ A E FGR+D +VNNAG  + G ++   ++TE E    + TN  G+
Sbjct: 57  DVT-DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIE---EVTESEARAQIDTNFFGA 112

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             V++ V   +R   + G +I ISSI   S    P    Y +SK  L  M++ L+ E+  
Sbjct: 113 LWVTQAVLPYLR-EQRSGHIIQISSIGGISAF--PMSGIYHASKWALEGMSEALAQEVAE 169

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT 238
             I+V  + PG + +         DW    A R  PL  + T
Sbjct: 170 FGIKVTLVEPGGYST---------DWAGTSAKRATPLDAYDT 202

Length = 275

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 1e-30
 Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 20/266 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ K  +VTGA+SG+G+E  L+LA+AG  +  A    D   ++ DEINK  G   +A+ V
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGG---KAIGV 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
            +DV+ N  A+   + K  E FG +D LV+NAG+   + +P+ + +  +W  +   ++ G
Sbjct: 62  AMDVT-NEDAVNAGIDKVAERFGSVDILVSNAGIQ--IVNPIENYSFADWKKMQAIHVDG 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++L +K     M   ++ G VI + S+   S    P   AY ++K GL  + + L+ E  
Sbjct: 119 AFLTTKAALKHMYKDDRGGVVIYMGSVH--SHEASPLKSAYVTAKHGLLGLARVLAKEGA 176

Query: 196 VHKIRVNSICPG-----LFKSEITE-----GLMKKDWLNNVASRTYPLRDFGTTDPALTS 245
            H +R + +CPG     L   +I E     G+ +++ +  V         F TT   +  
Sbjct: 177 KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVF-TTVEDVAQ 235

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATL 271
            V +L    S  ++G  F+V  G  +
Sbjct: 236 TVLFLSSFPSAALTGQSFVVSHGWFM 261

Length = 262

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 1e-30
 Identities = 68/197 (34%), Positives = 105/197 (53%), Gaps = 12/197 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            KVV++TGAS G+GR   + LA+AG ++V AAR   RL SL  E+    G    A+ V  
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGE---ALVVPT 57

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNH-IMKTNLTGS 136
           DVS +  A E  ++ A   FG ID LVNNAG++  + S  D LT+      +M+ N  G+
Sbjct: 58  DVS-DAEACERLIEAAVARFGGIDILVNNAGIT--MWSRFDELTDLSVFERVMRVNYLGA 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
              +      ++ A++ G ++ +SS+A  +   +P    YA+SK  L+     L +EL  
Sbjct: 115 VYCTHAALPHLK-ASR-GQIVVVSSLAGLT--GVPTRSGYAASKHALHGFFDSLRIELAD 170

Query: 197 HKIRVNSICPGLFKSEI 213
             + V  +CPG   ++I
Sbjct: 171 DGVAVTVVCPGFVATDI 187

Length = 263

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  119 bits (301), Expect = 1e-30
 Identities = 82/266 (30%), Positives = 132/266 (49%), Gaps = 22/266 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V  VTG + G+GRE    LA  G  +V A   ++  +++  EIN Q G+  RA+A+
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAG-RAVAL 470

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLTG 135
           ++DV+    A++ +      A+G +D +VNNAG+  A  SP + T  +EW   +    TG
Sbjct: 471 KMDVTDE-QAVKAAFADVALAYGGVDIVVNNAGI--ATSSPFEETTLQEWQLNLDILATG 527

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +LV++    +MR+    G+++ I+S  A   G      AY+++KA    + +CL+ E G
Sbjct: 528 YFLVAREAFRQMREQGLGGNIVFIASKNAVYAG--KNASAYSAAKAAEAHLARCLAAEGG 585

Query: 196 VHKIRVNSICP-------GLFKSEITE------GLMKKDWLNNVASRTYPLRDFGTTDPA 242
            + IRVN++ P       G++  E  E      G+   +   + A RT   R     D A
Sbjct: 586 TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIA 645

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSG 268
               V +L    SE  +G I  VD G
Sbjct: 646 --EAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  114 bits (286), Expect = 2e-30
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 19/259 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTG + G+G+     LAK G  +  A    +  K    EIN+  G   +A+A +LD
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGG---KAVAYKLD 57

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           VS +   + +++ +A E FG  D +VNNAGV   +   L++TEEE   +   N+ G    
Sbjct: 58  VS-DKDQVFSAIDQAAEKFGGFDVMVNNAGV-APITPILEITEEELKKVYNVNVKGVLFG 115

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
            +    + +     G +IN +SIA       P   AY+S+K  +  +T+  + EL    I
Sbjct: 116 IQAAARQFKKQGHGGKIINAASIAGHE--GNPILSAYSSTKFAVRGLTQTAAQELAPKGI 173

Query: 200 RVNSICPGLFKSEITEGLMKK----------DWLNNVASRTYPLRDFGTTDPALTSLVRY 249
            VN+ CPG+ K+ + E + ++          +     +S     R     D A   LV +
Sbjct: 174 TVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVA--GLVSF 231

Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  + S+Y++G   +VD G
Sbjct: 232 LASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  114 bits (286), Expect = 2e-30
 Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 25/266 (9%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVE 77
            KV +VTG++SG+G      LA AG  IV         ++++       +   V+ +   
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRA--GLAAKHGVKVLYHG 59

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            D+S   AAIE+ V  A   FG +D LVNNAG+   V    D   E+W+ I+  NL+  +
Sbjct: 60  ADLS-KPAAIEDMVAYAQRQFGGVDILVNNAGIQ-HVAPIEDFPTEKWDAIIALNLSAVF 117

Query: 138 LVSKYVCIRMRDANQEGSVINISS---IAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             ++     M+     G +INI+S   + A+         AY ++K G+  +TK ++LE 
Sbjct: 118 HTTRLALPHMK-KQGWGRIINIASVHGLVAS-----ANKSAYVAAKHGVVGLTKVVALET 171

Query: 195 GVHKIRVNSICPG-----LFKSEI-----TEGLMKKDWLNNVASRTYPLRDFGTTDPALT 244
               +  N+ICPG     L + +I       G+ ++     +     P + F T +  L 
Sbjct: 172 AGTGVTCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPE-QLG 230

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGAT 270
               +L  D++  ++G    VD G T
Sbjct: 231 DTAVFLASDAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  113 bits (285), Expect = 2e-30
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 27/257 (10%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V +VTG ++G+G+     LAKAG  +V A  + +  +++   I +  G   +A+ +E +V
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGG---QAIGLECNV 57

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
           ++    +E  V+     FG I  LVNNAG  G     + +TEE++    K NL  ++ +S
Sbjct: 58  TSE-QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLS 116

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
           +     M+ A   G+++NISS+++ ++       AY SSKA +N MT+ L+ +LG   IR
Sbjct: 117 QLCAPHMQKA-GGGAILNISSMSSENKN--VRIAAYGSSKAAVNHMTRNLAFDLGPKGIR 173

Query: 201 VNSICPGLFKSE--------ITEGLMKKDWLNNVASRTYPLRDFG-TTDPALTSLVRYLV 251
           VN++ PG  K++          E  M K           PL   G   D A  +L  +L 
Sbjct: 174 VNAVAPGAVKTDALASVLTPEIERAMLKH---------TPLGRLGEPEDIANAAL--FLC 222

Query: 252 HDSSEYVSGNIFIVDSG 268
             +S +VSG +  V  G
Sbjct: 223 SPASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  114 bits (286), Expect = 3e-30
 Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 21/268 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L+NKV ++TGAS+G+G+   + LA+ G  ++A     + +    D+I    G   +A A
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGG---KAKA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             +D+S +   +++   +  E FGR+D L NNAGV  A     +   + ++ IM  ++ G
Sbjct: 59  YHVDIS-DEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRG 117

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++L++K +   M    Q GS+IN SS +  +      G  Y ++K  +   TK +++E G
Sbjct: 118 TFLMTKMLLPLM--MEQGGSIINTSSFSGQAADLYRSG--YNAAKGAVINFTKSIAIEYG 173

Query: 196 VHKIRVNSICPGLFKSEITEGL-------MKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
              IR N+I PG  ++ + + L         K +  N    T PL   G  +  +  LV 
Sbjct: 174 RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-PLGRLGKPE-EVAKLVV 231

Query: 249 YLVHDSSEYVSGNIFIVDSGA---TLPG 273
           +L  D S +++G    +D G    T PG
Sbjct: 232 FLASDDSSFITGETIRIDGGVMAYTWPG 259

Length = 272

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  113 bits (285), Expect = 3e-30
 Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 40/276 (14%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  K +++TGA   +G      + +AG  ++AA    + L  L + + K+  S   ++ 
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSL- 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNA-------GVSGAVKSPLDLTEEEWNHI 128
           VELD++ +  ++E  + K+ E +G+ID  VN A       G     K   D++ +++N  
Sbjct: 60  VELDIT-DQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYG-----KKFFDVSLDDFNEN 113

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI---AA--------TSRGQLPGGVAYA 177
           +  +L  S+L S+    +       G+++NISSI    A        TS    P  V YA
Sbjct: 114 LSLHLGSSFLFSQ-QFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM-TSP--VEYA 169

Query: 178 SSKAGLNAMTKCLSLELGVHKIRVNSICP-GLFKSEITEGLMKKDWLNNVASRTYPLRDF 236
           + KAG+  +TK L+       IRVN + P G+  ++         +LN            
Sbjct: 170 AIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA------FLNAYKKCCN---GK 220

Query: 237 GTTDPA-LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           G  DP  +   + +L+ D S+Y++G   IVD G +L
Sbjct: 221 GMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 4e-30
 Identities = 73/260 (28%), Positives = 115/260 (44%), Gaps = 29/260 (11%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KVV +TG   GLGR     LA  G R+    R    L      +      ++R   +
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV---PADALRIGGI 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEEWNHIMKTNLT 134
           +L    +  A   +V +    FGR+DALVN AG  V G +    D   + W+ +   N+ 
Sbjct: 62  DL---VDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIA---DGDADTWDRMYGVNVK 115

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +   SK     +  A+  G ++NI + AA   G  PG  AYA++KAG+  +T+ L+ EL
Sbjct: 116 TTLNASKAALPALT-ASGGGRIVNIGAGAALKAG--PGMGAYAAAKAGVARLTEALAAEL 172

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG--TTDPALTSLVRYLVH 252
               I VN++ P +  +      M             P  DF    T   + +++ +L+ 
Sbjct: 173 LDRGITVNAVLPSIIDTPPNRADM-------------PDADFSRWVTPEQIAAVIAFLLS 219

Query: 253 DSSEYVSGNIFIVDSGATLP 272
           D ++ ++G    VD G  LP
Sbjct: 220 DEAQAITGASIPVDGGVALP 239

Length = 239

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  112 bits (282), Expect = 8e-30
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
              KV +VTG+S G+G+   L LA+ G  I    AR     +   +EI +  G   +A+A
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI-EALG--RKALA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ +V  +   I+    +  E FGR+D  VNNA  SG ++  ++L E  W+  M  N   
Sbjct: 59  VKANV-GDVEKIKEMFAQIDEEFGRLDVFVNNAA-SGVLRPAMELEESHWDWTMNINAKA 116

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
               ++     M      G +I++SS+ +     L        SKA L A+T+ L++EL 
Sbjct: 117 LLFCAQEAAKLMEK-VGGGKIISLSSLGSIR--YLENYTTVGVSKAALEALTRYLAVELA 173

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA--------LTSLV 247
              I VN+         ++ G +  D L +  +R   L D     PA        + + V
Sbjct: 174 PKGIAVNA---------VSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAV 224

Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            +L    ++ + G   IVD G +L
Sbjct: 225 LFLCSPEADMIRGQTIIVDGGRSL 248

Length = 250

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 1e-29
 Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 18/256 (7%)

Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRA 73
            +LD KV +VTG + GLG       A+ G   +V   R  ++ ++   E+        +A
Sbjct: 2   GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA---LGAKA 58

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
           + V+ D+S         V  A EAFGR+DALVN AG++    + LD + E ++     N+
Sbjct: 59  VFVQADLSDVEDC-RRVVAAADEAFGRLDALVNAAGLT-DRGTILDTSPELFDRHFAVNV 116

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
              + + +     MR    EG+++NI S++A   GQ P   AY +SK  L  +T+  +  
Sbjct: 117 RAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG-GQ-PFLAAYCASKGALATLTRNAAYA 174

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKK-------DWLNNVASRTYPLRDFGTTDPALTSL 246
           L  ++IRVN +  G   +E  E  +++       DWL   A+ T P       D  +   
Sbjct: 175 LLRNRIRVNGLNIGWMATE-GEDRIQREFHGAPDDWLEK-AAATQPFGRLLDPD-EVARA 231

Query: 247 VRYLVHDSSEYVSGNI 262
           V +L+ D S  ++G++
Sbjct: 232 VAFLLSDESGLMTGSV 247

Length = 260

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  111 bits (281), Expect = 1e-29
 Identities = 82/266 (30%), Positives = 129/266 (48%), Gaps = 35/266 (13%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAV 76
             KV ++TG +  +G      L  AG R+     R      +L  E+N     S  A+  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           +L    +  A+   V     AFGR+DALVNNA  S    +PL  +TE +W+ +  +NL  
Sbjct: 65  DL---LDPDALPELVAACVAAFGRLDALVNNA--SSFYPTPLGSITEAQWDDLFASNLKA 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + +S+    ++R   Q G+++NI+ I A     L G   Y ++KA L  +T+ L+LEL 
Sbjct: 120 PFFLSQAAAPQLR--KQRGAIVNITDIHAER--PLKGYPVYCAAKAALEMLTRSLALELA 175

Query: 196 VHKIRVNSICPG---------LFKSEITEGLMKKDWLNNVASRTYPLRDFGT-TDPALTS 245
              +RVN++ PG          F  E  + ++         +RT PL+  GT  D A   
Sbjct: 176 PE-VRVNAVAPGAILWPEDGNSFDEEARQAIL---------ART-PLKRIGTPEDIAEA- 223

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATL 271
            VR+L+ D+S +++G I  VD G +L
Sbjct: 224 -VRFLLADAS-FITGQILAVDGGRSL 247

Length = 249

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 1e-29
 Identities = 71/199 (35%), Positives = 101/199 (50%), Gaps = 11/199 (5%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            K+ +VTGASSG G    L+LAK G  ++A  R  ++ ++L      Q          +L
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENL-LSQATQLNLQQNIKVQQL 61

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           DV+ +  +I N  Q   +  GRID LVNNAG    G V+   ++  EE+    +TN+ G+
Sbjct: 62  DVT-DQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVE---EIPVEEYRKQFETNVFGA 116

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             V++ V   MR   + G +INISSI+   R   PG   Y SSK  L   ++ L LEL  
Sbjct: 117 ISVTQAVLPYMRK-QKSGKIINISSISG--RVGFPGLSPYVSSKYALEGFSESLRLELKP 173

Query: 197 HKIRVNSICPGLFKSEITE 215
             I V  I PG + + I E
Sbjct: 174 FGIDVALIEPGSYNTNIWE 192

Length = 280

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  108 bits (273), Expect = 2e-29
 Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 15/178 (8%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR--VDRLKSLCDEINKQSGSSVRAMAV 76
             V++TG + GLG      LA  G R +V  +RR        L  E+ +  G+ V   A 
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAEL-EALGAEVTVAAC 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV A+  A+   +     A G +D +V+NAGV        +LT E +  ++   +TG+
Sbjct: 60  --DV-ADRDALAALLAALPAALGPLDGVVHNAGVL-DDGPLEELTPERFERVLAPKVTGA 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           W + +      RD +  G+ +  SS+A       PG   YA++ A L+A+ +    E 
Sbjct: 116 WNLHE----LTRDLDL-GAFVLFSSVAGVLGS--PGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  110 bits (278), Expect = 3e-29
 Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 38/269 (14%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K V VTGA+ G+G    L   +AG +++      D+           +         
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIG----FDQ--------AFLTQEDYPFATF 53

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNLT 134
            LDVS + AA+    Q+     G +D LVN AG+   GA  S   L++E+W      N  
Sbjct: 54  VLDVS-DAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDS---LSDEDWQQTFAVNAG 109

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           G++ + + V  + R   + G+++ + S AA   R  +    AY +SKA L ++ KC+ LE
Sbjct: 110 GAFNLFRAVMPQFR-RQRSGAIVTVGSNAAHVPRIGM---AAYGASKAALTSLAKCVGLE 165

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY-----------PLRDFGTTDPA 242
           L  + +R N + PG   +++   L   +   +   +             PL         
Sbjct: 166 LAPYGVRCNVVSPGSTDTDMQRTLWVDE---DGEQQVIAGFPEQFKLGIPLGKIARPQ-E 221

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           + + V +L  D + +++    +VD GATL
Sbjct: 222 IANAVLFLASDLASHITLQDIVVDGGATL 250

Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 8e-29
 Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 17/258 (6%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K V+V G +SG+        A+AG  +  A+R  +++ +   ++ +        + V  D
Sbjct: 10  KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP---EGLGVSAD 66

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWL 138
           V    AA+E +  +  + FG ID LV  +G +G   +P   ++   +  ++  +L G++ 
Sbjct: 67  VRDY-AAVEAAFAQIADEFGPIDVLV--SGAAGNFPAPAAGMSANGFKTVVDIDLLGTFN 123

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           V K     +R      S+I IS+  A     +P      ++KAG++ +T+ L+LE G   
Sbjct: 124 VLKAAYPLLRRPG--ASIIQISAPQAFV--PMPMQAHVCAAKAGVDMLTRTLALEWGPEG 179

Query: 199 IRVNSICPGLFKSEITEG---LMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
           IRVNSI PG      TEG   L     L    +++ PL+  GT    + +   +L  D +
Sbjct: 180 IRVNSIVPGPI--AGTEGMARLAPSPELQAAVAQSVPLKRNGTKQD-IANAALFLASDMA 236

Query: 256 EYVSGNIFIVDSGATLPG 273
            Y++G +  VD G +L G
Sbjct: 237 SYITGVVLPVDGGWSLGG 254

Length = 264

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 8e-29
 Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 30/265 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  +V ++TG  SG+G      LA  G  +V      +  K+  DE+    G  V    
Sbjct: 4   RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPT-- 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK-SPLDLTEEEWNHIMKTNLT 134
              DV+ +  A+      A E +G +D   NNAG+S     S L+   + W  +   NLT
Sbjct: 59  ---DVT-DEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLT 114

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSI-----AATSRGQLPGGVAYASSKAGLNAMTKC 189
             +L  K     M     +GS+IN +S      +ATS+      ++Y +SK G+ AM++ 
Sbjct: 115 SVYLCCKAALPHMV-RQGKGSIINTASFVAVMGSATSQ------ISYTASKGGVLAMSRE 167

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY---PLRDFGTTDPA-LTS 245
           L ++     IRVN++CPG   + + + L  KD     A+R     P+  F   +P  + +
Sbjct: 168 LGVQFARQGIRVNALCPGPVNTPLLQELFAKD--PERAARRLVHVPMGRFA--EPEEIAA 223

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGAT 270
            V +L  D + +++ + F+VD G +
Sbjct: 224 AVAFLASDDASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  109 bits (275), Expect = 8e-29
 Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 20/203 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-----RVDRLKSL-------CDEIN 64
           L  KV  VTGAS G+GR   L LAKAG  +V AA+          KSL        +EI 
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 65  KQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE 124
              G   +A+ + +DV  +   +   V+   + FGR+D LVNNAG    +    D   + 
Sbjct: 61  AAGG---QALPIVVDVR-DEDQVRALVEATVDQFGRLDILVNNAGA-IWLSLVEDTPAKR 115

Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLN 184
           ++ + + NL G++L+S+   +       +G ++NIS   +       G VAYA+ KAG++
Sbjct: 116 FDLMQRVNLRGTYLLSQA-ALPHMVKAGQGHILNISPPLSLRPA--RGDVAYAAGKAGMS 172

Query: 185 AMTKCLSLELGVHKIRVNSICPG 207
            +T  L+ EL  H I VNS+ P 
Sbjct: 173 RLTLGLAAELRRHGIAVNSLWPS 195

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  114 bits (288), Expect = 8e-29
 Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 19/204 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K+V+VTGA SG+GRE  L  A+ G  +VA+       +   + I + +G    A A 
Sbjct: 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI-RAAG--AVAHAY 369

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL--- 133
            +DVS +  A+E   +      G  D +VNNAG+ G     LD + E+W+ ++  NL   
Sbjct: 370 RVDVS-DADAMEAFAEWVRAEHGVPDIVVNNAGI-GMAGGFLDTSAEDWDRVLDVNLWGV 427

Query: 134 -TGSWLVSKYVCIRMRDANQEGSVINISSIAA--TSRGQLPGGVAYASSKAGLNAMTKCL 190
             G  L  +    +M +    G ++N++S AA   SR  LP   AYA+SKA +  +++CL
Sbjct: 428 IHGCRLFGR----QMVERGTGGHIVNVASAAAYAPSRS-LP---AYATSKAAVLMLSECL 479

Query: 191 SLELGVHKIRVNSICPGLFKSEIT 214
             EL    I V +ICPG   + I 
Sbjct: 480 RAELAAAGIGVTAICPGFVDTNIV 503

Length = 582

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  109 bits (275), Expect = 9e-29
 Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 15/252 (5%)

Query: 24  VTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA 82
           +TGA+ GLGR     +A+ G ++ +        L +   EIN   G  V A A   DV+ 
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGV-AFAAVQDVTD 62

Query: 83  NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKY 142
                   + +A +A G +  LVNNAGV G+  +   +  +EW  +M  N+   +L  K+
Sbjct: 63  EAQWQA-LLAQAADAMGGLSVLVNNAGV-GSFGAIEQIELDEWRRVMAINVESIFLGCKH 120

Query: 143 VCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK--IR 200
               +R  +Q  S++NISS+AA      P   AY +SKA + ++TK ++L+       +R
Sbjct: 121 ALPYLRA-SQPASIVNISSVAAFKAE--PDYTAYNASKAAVASLTKSIALDCARRGLDVR 177

Query: 201 VNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
            NSI P   ++ I + +     +++    +A R  PL   G  D  +   V YL  D S 
Sbjct: 178 CNSIHPTFIRTGIVDPIFQRLGEEEATRKLA-RGVPLGRLGEPDD-VAHAVLYLASDESR 235

Query: 257 YVSGNIFIVDSG 268
           +V+G   ++D G
Sbjct: 236 FVTGAELVIDGG 247

Length = 251

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 1e-28
 Identities = 83/255 (32%), Positives = 122/255 (47%), Gaps = 15/255 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAM 74
            L NKV +VTGAS G+G      LA  G  +    A        L  EI    G   RA+
Sbjct: 2   TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG---RAI 58

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           AV+ DV A+ AA+      A  AFGRID LVNNAGV   + +  D   E+++  + TNL 
Sbjct: 59  AVQADV-ADAAAVTRLFDAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLR 116

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G+++V +     +    Q G +IN+S+        LPG   YA+SKA +  +   L+ EL
Sbjct: 117 GAFVVLREAARHLG---QGGRIINLSTSVI--ALPLPGYGPYAASKAAVEGLVHVLANEL 171

Query: 195 GVHKIRVNSICPGLFKSEI-TEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
               I VN++ PG   +E+   G  K     +  +   PL   GT +  + + V +L   
Sbjct: 172 RGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAPLERLGTPEE-IAAAVAFLAGP 228

Query: 254 SSEYVSGNIFIVDSG 268
              +V+G +  V+ G
Sbjct: 229 DGAWVNGQVLRVNGG 243

Length = 245

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  109 bits (275), Expect = 2e-28
 Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 27/265 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA--------ARRVDRLKSLCDEINKQSG 68
           L  K  ++TG  SG+GR   +  A+ G  +           A    +L        ++ G
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLI-------EEEG 76

Query: 69  SSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
                +  +L   +    +   V++  + FG++D LVNNA      +S  D+T E+    
Sbjct: 77  RKCLLIPGDLGDESFCRDL---VKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKT 133

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKAGLNAMT 187
            +TN+   + ++K     ++   +  S+IN +S+ A      L   + YA++K  + A T
Sbjct: 134 FRTNIFSMFYLTKAALPHLK---KGSSIINTTSVTAYKGSPHL---LDYAATKGAIVAFT 187

Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           + LSL+L    IRVN++ PG   + +      ++ ++   S+  P+   G       + V
Sbjct: 188 RGLSLQLAEKGIRVNAVAPGPIWTPLIPSSFPEEKVSEFGSQV-PMGRAGQPAEVAPAYV 246

Query: 248 RYLVHDSSEYVSGNIFIVDSGATLP 272
            +L    S YV+G +  V+ G  + 
Sbjct: 247 -FLASQDSSYVTGQVLHVNGGEIIN 270

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  108 bits (273), Expect = 2e-28
 Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR--VDRLKSLCDEINKQSGSSVRAMAVE 77
           KV ++TG +SG+G      L K G ++    R         L   IN      V+A  V+
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAEL-QAIN----PKVKATFVQ 55

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTG- 135
            DV+ +   +  + +KA E FGR+D L+NNAG+               W   +  NLTG 
Sbjct: 56  CDVT-SWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGV 114

Query: 136 ---SWLVSKYVCIRMRDANQE--GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
              ++L   Y    M        G ++NI S+A       P    Y++SK G+   T+ L
Sbjct: 115 INTTYLALHY----MDKNKGGKGGVIVNIGSVAGLY--PAPQFPVYSASKHGVVGFTRSL 168

Query: 191 SLELGV-HKIRVNSICPGLFKSEITEGLMKKDW 222
           +  L     +RVN+ICPG   + +   L+ K+ 
Sbjct: 169 ADLLEYKTGVRVNAICPGFTNTPLLPDLVAKEA 201

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 2e-28
 Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 22/262 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV ++TGA+SG+G          G R+V A  +  R +    EI         A+AV
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPA------AIAV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+    +I+  V  A E FG ID L NNA +   +   LD++ + ++ +   N+ G 
Sbjct: 58  SLDVT-RQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGL 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + + + V   M +  + G +IN++S  A  RG+      Y ++KA + + T+  +L L  
Sbjct: 116 FFLMQAVARHMVEQGRGGKIINMAS-QAGRRGEALVSH-YCATKAAVISYTQSAALALIR 173

Query: 197 HKIRVNSICPGLFKSEI----------TEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
           H I VN+I PG+  + +           E     +    V     PL   G  D  LT +
Sbjct: 174 HGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGE-AVPLGRMGVPDD-LTGM 231

Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
             +L    ++Y+    + VD G
Sbjct: 232 ALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 3e-28
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 14/194 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +  +VV++TGAS+G+GR      A+ G ++V  AR  + L++L  EI    G    A+AV
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGG---EALAV 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             DV A+  A++ +  +A E  G ID  VNNA V+  V  P  D+T EE+  + +    G
Sbjct: 63  VADV-ADAEAVQAAADRAEEELGPIDTWVNNAMVT--VFGPFEDVTPEEFRRVTEVTYLG 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
               +      MR  +  G++I + S  A +   +P   AY ++K  +   T  L  EL 
Sbjct: 120 VVHGTLAALRHMRPRD-RGAIIQVGS--ALAYRSIPLQSAYCAAKHAIRGFTDSLRCEL- 175

Query: 196 VH---KIRVNSICP 206
           +H    + V  + P
Sbjct: 176 LHDGSPVSVTMVQP 189

Length = 334

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 3e-28
 Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 11/194 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMA 75
           LD +V  VTGA SG+G+   + LA+AG  +     R D  L    + I        RA+ 
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR---RAIQ 62

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  DV+ + A +  +V +     G +   VN AG++ A  +  ++ EE+W  +M  NLTG
Sbjct: 63  IAADVT-SKADLRAAVARTEAELGALTLAVNAAGIANANPA-EEMEEEQWQTVMDINLTG 120

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            +L  +     M   N  GS++NI+S++    +RG L     Y +SKAG+  ++K L++E
Sbjct: 121 VFLSCQAEARAML-ENGGGSIVNIASMSGIIVNRGLLQA--HYNASKAGVIHLSKSLAME 177

Query: 194 LGVHKIRVNSICPG 207
                IRVNSI PG
Sbjct: 178 WVGRGIRVNSISPG 191

Length = 254

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 4e-28
 Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 58/288 (20%)

Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           W  L  K+++VTG SSG+G     +L   G  +V A            +I+   G     
Sbjct: 4   WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA------------DIHGGDGQHENY 51

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSG--------AVKSPLDLTEEEW 125
             V  DVS +   + ++V +  E FGRID LVNNAG++               +L E  +
Sbjct: 52  QFVPTDVS-SAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAF 110

Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGL 183
           + +   N  G +L+S+ V  +M     +G ++N+SS A    S GQ      YA++KA L
Sbjct: 111 DKMFNINQKGVFLMSQAVARQMVK-QHDGVIVNMSSEAGLEGSEGQ----SCYAATKAAL 165

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFK---------------------SEITEGLMKKDW 222
           N+ T+  + ELG H IRV  + PG+ +                      ++  G  K   
Sbjct: 166 NSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTS- 224

Query: 223 LNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
                  T PL   G     +  LV YL+ D + Y++G    +  G T
Sbjct: 225 -------TIPLGRSGKLS-EVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 4e-28
 Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 17/255 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            +  +VTGA+ G+G+        AG R++A       L +  D +        R + V  
Sbjct: 2   KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL-----GDARFVPVAC 56

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           D+  + A++  ++  A    G +D LV NAG + A  S  D T   W      NL  ++L
Sbjct: 57  DL-TDAASLAAALANAAAERGPVDVLVANAGAARAA-SLHDTTPASWRADNALNLEAAYL 114

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
             + V   M      G+V+NI S+   +     G  AY+++KAGL   TK L++E G   
Sbjct: 115 CVEAVLEGML-KRSRGAVVNIGSVNGMA---ALGHPAYSAAKAGLIHYTKLLAVEYGRFG 170

Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNV---ASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
           IR N++ PG  K++  E  +  +    V     + YPL+DF T D  + + V +L   ++
Sbjct: 171 IRANAVAPGTVKTQAWEARVAAN--PQVFEELKKWYPLQDFATPDD-VANAVLFLASPAA 227

Query: 256 EYVSGNIFIVDSGAT 270
             ++G    VD G T
Sbjct: 228 RAITGVCLPVDGGLT 242

Length = 257

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  107 bits (268), Expect = 5e-28
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTGAS G+G E    LA+ G R+    R  + L +        S S     AV  D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAA-------LSASGGDVEAVPYD 53

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
              +       V    + FGRID LV+NAG+        + ++ E       N+     +
Sbjct: 54  AR-DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTL-REGSDAELEAHFSINVIAPAEL 111

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++ +   +R+A   G V+ ++S++      L G   Y++SK  L A+   L  E   H +
Sbjct: 112 TRALLPALREAGS-GRVVFLNSLSGK--RVLAGNAGYSASKFALRALAHALRQEGWDHGV 168

Query: 200 RVNSICPG 207
           RV+++CPG
Sbjct: 169 RVSAVCPG 176

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score =  107 bits (269), Expect = 5e-28
 Identities = 75/251 (29%), Positives = 126/251 (50%), Gaps = 20/251 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            + +VTG S G+GR   L LA+ G  + V   + +   + + + I +  G   +A  ++ 
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGG---KAFVLQA 58

Query: 79  DVSANGAAIENSVQKAWEAF----GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           D+S      EN V   + A       + ALVNNAG+     +  +LT E  N ++ TN+T
Sbjct: 59  DISD-----ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVT 113

Query: 135 GSWLVSKYVCIRM--RDANQEGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMTKCLS 191
           G +L  +    RM  +     G+++N+SS  A SR   PG  V YA+SK  ++ +T  LS
Sbjct: 114 GYFLCCREAVKRMALKHGGSGGAIVNVSS--AASRLGAPGEYVDYAASKGAIDTLTTGLS 171

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           LE+    IRVN + PG   +E+     +   ++ V S   P++  G  +    ++V +L+
Sbjct: 172 LEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKS-NIPMQRGGQPEEVAQAIV-WLL 229

Query: 252 HDSSEYVSGNI 262
            D + YV+G+ 
Sbjct: 230 SDKASYVTGSF 240

Length = 247

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score =  108 bits (271), Expect = 5e-28
 Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 22/198 (11%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            KV +VTGASSG+G+     LA  G  +  AARRVD+++ L         +S+    + L
Sbjct: 3   KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL---------ASLGVHPLSL 53

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLTGS 136
           DV+ + A+I+ +V       GRID LVNNAG    GA++   D+  +E     + NL G+
Sbjct: 54  DVT-DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIE---DVPIDEARRQFEVNLFGA 109

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLEL 194
             +++ V   MR A + G +INISS+     G++  P G  Y ++K  L   +  L LE+
Sbjct: 110 ARLTQLVLPHMR-AQRSGRIINISSMG----GKIYTPLGAWYHATKFALEGFSDALRLEV 164

Query: 195 GVHKIRVNSICPGLFKSE 212
               I V  I PG  K+E
Sbjct: 165 APFGIDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 5e-28
 Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 37/273 (13%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV---------AAARRVDRLKSLCDEINKQ 66
            LD +VV+VTGA  G+GR   L  A  G R+V          +A      +++ DEI   
Sbjct: 3   LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA 62

Query: 67  SGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEE 124
            G    A+A   D+ A+     N V  A E FG +D LVNNAG+   ++  +  +++EEE
Sbjct: 63  GG---EAVANGDDI-ADWDGAANLVDAAVETFGGLDVLVNNAGI---LRDRMIANMSEEE 115

Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEG-----SVINISSIAAT--SRGQLPGGVAYA 177
           W+ ++  +L G +   ++     R  ++ G      +IN SS A    S GQ      Y+
Sbjct: 116 WDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQ----GNYS 171

Query: 178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG 237
           ++KAG+ A+T   + ELG + + VN+I P   ++ +TE +  +              +F 
Sbjct: 172 AAKAGIAALTLVAAAELGRYGVTVNAIAPAA-RTRMTETVFAE------MMAKPEEGEFD 224

Query: 238 TTDPALTS-LVRYLVHDSSEYVSGNIFIVDSGA 269
              P   S LV +L    S  V+G +F V+ G 
Sbjct: 225 AMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK 257

Length = 286

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  107 bits (269), Expect = 6e-28
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 23/264 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAM 74
            L +KVV+VTG+  G+GR   + LAK G  +V  A +R + +      + +  G  +  +
Sbjct: 3   SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVL 62

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNL 133
           A   DVS      E   +   + +G  D LVNNAG+   + SP L++ ++  +  + T+ 
Sbjct: 63  A---DVSTR-EGCETLAKATIDRYGVADILVNNAGL--GLFSPFLNVDDKLIDKHISTDF 116

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
                 S+ +   MR+    G+++NI+S+A        G   Y + KA +  +TK L+LE
Sbjct: 117 KSVIYCSQELAKEMREG---GAIVNIASVAGIR--PAYGLSIYGAMKAAVINLTKYLALE 171

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT---TDPA-LTSLVRY 249
           L   KIRVN+I PG  K+++ E L K   +  ++ + +  +        DP  +   V  
Sbjct: 172 LA-PKIRVNAIAPGFVKTKLGESLFK---VLGMSEKEFAEKFTLMGKILDPEEVAEFVAA 227

Query: 250 LVHDSSEYVSGNIFIVDSGATLPG 273
           ++    E ++G +F++DSG +L G
Sbjct: 228 IL--KIESITGQVFVLDSGESLKG 249

Length = 252

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  107 bits (269), Expect = 7e-28
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 7/201 (3%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +KVV+VTG S G+GR       + G ++V  AR     ++L  E+N+    S     V  
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGS--CKFVPC 66

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DV+     I+  +    E FGRID LVNNAG     ++  + + +E+  ++  NL   +L
Sbjct: 67  DVTKE-EDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFL 125

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
            SKY    +R    +G++IN+SS+   S GQ      Y ++K  + AMTK L+++   + 
Sbjct: 126 ASKYALPHLR--KSQGNIINLSSLVG-SIGQ-KQAAPYVATKGAITAMTKALAVDESRYG 181

Query: 199 IRVNSICPGLFKSEITEGLMK 219
           +RVN I PG   + + E L  
Sbjct: 182 VRVNCISPGNIWTPLWEELAA 202

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score =  106 bits (267), Expect = 1e-27
 Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 16/248 (6%)

Query: 21  VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           V+++TGAS G+GR    +L K G    +V  AR  + L+ L +E+  + G  V  +  +L
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEEL--RPGLRVTTVKADL 58

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
             +A    +  +++K     G  D L+NNAG  G V     +  +E       NLT    
Sbjct: 59  SDAAGVEQLLEAIRKLD---GERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVC 115

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           ++  +    +    + +V+N+SS AA +     G   Y SSKA  +   + L+ E     
Sbjct: 116 LTSTLLRAFKKRGLKKTVVNVSSGAAVN--PFKGWGLYCSSKAARDMFFRVLAAEE--PD 171

Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT-TDPALTS--LVRYLVHDSS 255
           +RV S  PG+  +++   + +        SR   L++ G   DP  ++  L   L  D  
Sbjct: 172 VRVLSYAPGVVDTDMQREIRETSADPETRSRFRSLKEKGELLDPEQSAEKLANLLEKDK- 230

Query: 256 EYVSGNIF 263
            + SG   
Sbjct: 231 -FESGAHV 237

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  106 bits (265), Expect = 2e-27
 Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 20/258 (7%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
            KV+++TGAS G+G    L  A+ G  + +   R  D  +++   I +Q G    A+AV 
Sbjct: 2   RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGG---EALAVA 58

Query: 78  LDVSANGAAIENSVQKAWEA----FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
            DV     A E  V + +EA     GR+DALVNNAG+  A      +       I  TN+
Sbjct: 59  ADV-----ADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNV 113

Query: 134 TGSWLVSKYVCIRM--RDANQEGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMTKCL 190
            GS+L ++    RM  R   + G+++N+SS+AA  R   PG  + YA+SK  ++ MT  L
Sbjct: 114 VGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAA--RLGSPGEYIDYAASKGAIDTMTIGL 171

Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           + E+    IRVN++ PG+  +EI     +   ++ V +   P+   GT +  +   + +L
Sbjct: 172 AKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKA-GIPMGRGGTAE-EVARAILWL 229

Query: 251 VHDSSEYVSGNIFIVDSG 268
           + D + Y +G    V  G
Sbjct: 230 LSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  105 bits (263), Expect = 4e-27
 Identities = 79/254 (31%), Positives = 134/254 (52%), Gaps = 13/254 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAM 74
           QL+ KV +VTG + G+G+   + LA+ G ++V       +  ++L +E+ K+        
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD---VY 59

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           AV+ DVS    A    V++A   FG++D LVNNAG++   ++   L  E+W  ++  NL+
Sbjct: 60  AVQADVSKVEDA-NRLVEEAVNHFGKVDILVNNAGITRD-RTFKKLNREDWERVIDVNLS 117

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +  +  V   + +A +EG +I+ISSI   + G   G   Y+++KAG+   TK L+LEL
Sbjct: 118 SVFNTTSAVLPYITEA-EEGRIISISSIIGQAGGF--GQTNYSAAKAGMLGFTKSLALEL 174

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
               + VN+ICPG   +E+   + ++     VA    P + FG  D     +V YL  D 
Sbjct: 175 AKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAK--IPKKRFGQADEIAKGVV-YLCRDG 231

Query: 255 SEYVSGNIFIVDSG 268
           + Y++G    ++ G
Sbjct: 232 A-YITGQQLNINGG 244

Length = 247

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 4e-27
 Identities = 65/199 (32%), Positives = 94/199 (47%), Gaps = 23/199 (11%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
             K  ++TG SSG GR        AG R+V   R              ++    RA+A  
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF------EALHPDRALARL 56

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAV-KSPLDLTEEEWNHIMKTNLT 134
           LDV+ +  AI+  V  A   FG ID LVNNAG    GA+ +SPL     E     + N+ 
Sbjct: 57  LDVT-DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLA----EMRRQFEVNVF 111

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL---PGGVAYASSKAGLNAMTKCLS 191
           G+  ++K V   MR A + G ++NI+S+     G L   PG   Y  SK  L  +++ L+
Sbjct: 112 GAVAMTKAVLPGMR-ARRRGHIVNITSM-----GGLITMPGIGYYCGSKFALEGISESLA 165

Query: 192 LELGVHKIRVNSICPGLFK 210
            E+    I V ++ PG F+
Sbjct: 166 KEVAPFGIHVTAVEPGSFR 184

Length = 277

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  105 bits (263), Expect = 5e-27
 Identities = 71/196 (36%), Positives = 99/196 (50%), Gaps = 18/196 (9%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G      L K G R+   AR  + L +   E+ +     V A    
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA---GVEADGRT 58

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV  +   IE  V  A   +G ID LVNNAG SG   +  +L +E W  +++TNLTG +
Sbjct: 59  CDVR-SVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATA-ELADELWLDVVETNLTGVF 116

Query: 138 LVSKYVCIR--MRDANQEGSVINISSIAATSRGQLPGGVAYAS----SKAGLNAMTKCLS 191
            V+K V     M +    G +INI+S           GV +A+    SK G+   TK L 
Sbjct: 117 RVTKEVLKAGGMLE-RGTGRIINIASTGGKQ------GVVHAAPYSASKHGVVGFTKALG 169

Query: 192 LELGVHKIRVNSICPG 207
           LEL    I VN++CPG
Sbjct: 170 LELARTGITVNAVCPG 185

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 6e-27
 Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 10/254 (3%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             KVV++TGAS G+GR   +  A  G  + +  AR     +   D +    G   RA  V
Sbjct: 1   MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGG---RACVV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV AN A +         AFGR+DALVNNAG+        D+       +  TN+ G+
Sbjct: 58  AGDV-ANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGA 116

Query: 137 WLVSKYVCIRMRDA--NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           +L ++    R+      + G+++N+SSIA+   G     V YA SK  ++ +T  L+ EL
Sbjct: 117 YLCAREAARRLSTDRGGRGGAIVNVSSIAS-RLGSPNEYVDYAGSKGAVDTLTLGLAKEL 175

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
           G H +RVN++ PGL ++EI     +      + ++T PL   G  D    ++V +L+ D+
Sbjct: 176 GPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQT-PLGRAGEADEVAETIV-WLLSDA 233

Query: 255 SEYVSGNIFIVDSG 268
           + YV+G +  V  G
Sbjct: 234 ASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 9e-27
 Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS-SVRAMA 75
             ++  +VTG  SG+G+     L  AG  ++   R  D+L +  +EI    G+ +VR   
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV+ +   +  +V  A    GR+  +V+ AG S  +     +  + W   +  N+ G
Sbjct: 65  A--DVT-DEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNG 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  V K+   R       GS + ISSIAA++  +  G  AY  +K+ ++ + K  + ELG
Sbjct: 122 TMYVLKHAA-RELVRGGGGSFVGISSIAASNTHRWFG--AYGVTKSAVDHLMKLAADELG 178

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              +RVNSI PGL ++++   + +   L+       PL   G  +  + +L  +L+ D++
Sbjct: 179 PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVED-VANLAMFLLSDAA 237

Query: 256 EYVSGNIFIVDSGATLPGLPIFSSL 280
            +++G +  VD G  L   P FSS+
Sbjct: 238 SWITGQVINVDGGHMLRRGPDFSSM 262

Length = 276

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  104 bits (261), Expect = 9e-27
 Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 15/254 (5%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K+V+VTG S G+GR       +AG R++ +AR+ +     C +  ++  +    +A+  D
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAE----ACADAAEELSAYGECIAIPAD 62

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVS-GAVKSPLD-LTEEEWNHIMKTNLTGSW 137
           +S+    IE  V +  E   R+D LVNNAG + GA   PL+   E  W+ +M  N+   +
Sbjct: 63  LSSE-EGIEALVARVAERSDRLDVLVNNAGATWGA---PLEAFPESGWDKVMDINVKSVF 118

Query: 138 LVSKYVCIRMR---DANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +++ +   +R    A     VINI SIA           +Y +SKA ++ +T+ L+ EL
Sbjct: 119 FLTQALLPLLRAAATAENPARVINIGSIAGI-VVSGLENYSYGASKAAVHQLTRKLAKEL 177

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
               I VN+I PG F S++T  L+          ++ PL  +G  +     L   L   +
Sbjct: 178 AGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDM-AGLAIMLASRA 236

Query: 255 SEYVSGNIFIVDSG 268
             Y++G +  VD G
Sbjct: 237 GAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score =  103 bits (259), Expect = 1e-26
 Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           VV++TGASSG+GR   L  A+ G ++V AAR  + L  L  E+ +  G    A+AV  DV
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGG---EAIAVVADV 58

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
            A+ A +E +   A E FGRID  VNNAGV        D+T EE+  +   N  G    +
Sbjct: 59  -ADAAQVERAADTAVERFGRIDTWVNNAGV-AVFGRFEDVTPEEFRRVFDVNYLGHVYGT 116

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
                 +R     G++IN+ S         P   AY++SK  +   T+ L  EL
Sbjct: 117 LAALPHLRRRG-GGALINVGS--LLGYRSAPLQAAYSASKHAVRGFTESLRAEL 167

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  103 bits (258), Expect = 1e-26
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K  +VTGAS G+G      L   G R+   AR   RL +   +  +        + +  D
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE------GVLGLAGD 54

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           V  + A +  +V    EAFG +DALVNNAGV G +K   +LT EEW  ++ TNLTG++  
Sbjct: 55  VR-DEADVRRAVDAMEEAFGGLDALVNNAGV-GVMKPVEELTPEEWRLVLDTNLTGAFYC 112

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
                  +      G+++N+ S+A   +    GG AY +SK GL  +++   L+L    I
Sbjct: 113 IHKAAPALL-RRGGGTIVNVGSLA--GKNAFKGGAAYNASKFGLLGLSEAAMLDLREANI 169

Query: 200 RVNSICPGLFKSEITEGLMKKDW 222
           RV ++ PG   +        + W
Sbjct: 170 RVVNVMPGSVDTGFAGSPEGQAW 192

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  103 bits (258), Expect = 2e-26
 Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 17/261 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +K  +VTG   G+G   C   A+ G ++       +  + +  +I  + G+   A A 
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGN---AQAF 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE-EWNHIMKTNLTG 135
             D+  +  +++ +V  A +A G +D LVNNAG       P   TE   W  ++  NLTG
Sbjct: 58  ACDI-TDRDSVDTAVAAAEQALGPVDVLVNNAGWD--KFGPFTKTEPPLWERLIAINLTG 114

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  +   V   M +    G ++NI+S AA  R    G   YA+ K GL A +K ++ E  
Sbjct: 115 ALHMHHAVLPGMVERGA-GRIVNIASDAA--RVGSSGEAVYAACKGGLVAFSKTMAREHA 171

Query: 196 VHKIRVNSICPG-----LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
            H I VN +CPG     L   +I  G    + L    +R  PL   G  D  L   + + 
Sbjct: 172 RHGITVNVVCPGPTDTALL-DDICGGAENPEKLREAFTRAIPLGRLGQPDD-LPGAILFF 229

Query: 251 VHDSSEYVSGNIFIVDSGATL 271
             D + +++G +  V  G T+
Sbjct: 230 SSDDASFITGQVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  103 bits (259), Expect = 2e-26
 Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 24/266 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            + KVV+VTGA+ G+GR     LA  G R++   R  + +  +  EI     +   A   
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEI---LAAGDAAHVH 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTG 135
             D+     A +  V+ A E FGR+D L+NN G       P +   EE+    ++ +L  
Sbjct: 58  TADLETYAGA-QGVVRAAVERFGRVDVLINNVG-GTIWAKPYEHYEEEQIEAEIRRSLFP 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +    + V   M    Q+G ++N+SSIA  +RG     + Y+++K G+NA+T  L+ E  
Sbjct: 116 TLWCCRAVLPHML-ERQQGVIVNVSSIA--TRGIYR--IPYSAAKGGVNALTASLAFEHA 170

Query: 196 VHKIRVNSICPGLFKSEI-----TEGLMK---KDWLNNVASRTY---PLRDFGTTDPALT 244
              IRVN++ PG  ++           M    K W   +  +T     +  +GT D  + 
Sbjct: 171 RDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQV- 229

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGAT 270
             + +L  D + Y++G +  V  G  
Sbjct: 230 RAILFLASDEASYITGTVLPVGGGDL 255

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 3e-26
 Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  K+ ++TGAS G+G       AKAG  IV      + +        ++ G  + A  
Sbjct: 7   SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDK-GLAAYRELG--IEAHG 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV+ +   ++  V +  +  G ID LVNNAG+   +   L+++ E++  ++  +L  
Sbjct: 64  YVCDVT-DEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI-PMLEMSAEDFRQVIDIDLNA 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            ++VSK V   M      G +INI S+ +    +     AYA++K GL  +TK ++ E G
Sbjct: 122 PFIVSKAVIPSMIKKGH-GKIINICSMMSELGRETVS--AYAAAKGGLKMLTKNIASEYG 178

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNN-------VASRTYPLRDFGTTD----PALT 244
              I+ N I PG   +  T  L +     +       + ++T P   +G  +    PA+ 
Sbjct: 179 EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT-PAARWGDPEDLAGPAV- 236

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSG 268
               +L  D+S +V+G+I  VD G
Sbjct: 237 ----FLASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  102 bits (256), Expect = 4e-26
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 18/258 (6%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +VV+VTGAS GLG       A+ G R +V   R  +  +++  E  +      RA+A++ 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGE------RAIAIQA 54

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGV-----SGAVKSPLDLTEEEWNHIMKTNL 133
           DV  +   ++  +++A   FG +D +VNNA +         K+   +  E++   ++  +
Sbjct: 55  DVR-DRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAV 113

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G+  + + V    +     G VINI +    +   +P    Y ++KA L   T+ ++ E
Sbjct: 114 KGALNLLQAVLPDFK-ERGSGRVINIGTNLFQN-PVVPYH-DYTTAKAALLGFTRNMAKE 170

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           LG + I VN +  GL K         K+  + +A  T PL    T    +   V +    
Sbjct: 171 LGPYGITVNMVSGGLLKVTDASAATPKEVFDAIAQTT-PLGKVTTPQD-IADAVLFFASP 228

Query: 254 SSEYVSGNIFIVDSGATL 271
            +  V+G   +VD G  +
Sbjct: 229 WARAVTGQNLVVDGGLVM 246

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  101 bits (255), Expect = 7e-26
 Identities = 79/262 (30%), Positives = 112/262 (42%), Gaps = 27/262 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +VV+VTG + G+G         AG  +V   RR               G      A 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR---------APETVDGRPAEFHA- 53

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAG----VSGAVKSPLDLTEEEWNHIMKTN 132
             DV  +   +   V    E  GR+D LVNNAG       A  SP    E+    I++ N
Sbjct: 54  -ADV-RDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASP-RFHEK----IVELN 106

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L    LV++     M+     GS++NI S++   R   PG  AY ++KAGL  +T+ L++
Sbjct: 107 LLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR-RPS-PGTAAYGAAKAGLLNLTRSLAV 164

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT-TDPALTSLVRYLV 251
           E    K+RVN++  GL ++E +E            + T PL    T  D A   L  +L 
Sbjct: 165 EWAP-KVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACL--FLA 221

Query: 252 HDSSEYVSGNIFIVDSGATLPG 273
            D + YVSG    V  G   P 
Sbjct: 222 SDLASYVSGANLEVHGGGERPA 243

Length = 252

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score =  101 bits (254), Expect = 9e-26
 Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 9/207 (4%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            +V +VTGAS G+G      L + G ++V  ARRVD++++L  E       ++     +L
Sbjct: 6   GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDL 65

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSW 137
                  ++ ++++   +    +D  +NNAG+  A   PL     E W  +   N+    
Sbjct: 66  SNEEQILSMFSAIRTQHQG---VDVCINNAGL--ARPEPLLSGKTEGWKEMFDVNVLALS 120

Query: 138 LVSKYVCIRMRDAN-QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + ++     M++ N  +G +INI+S++      +     YA++K  + A+T+ L  EL  
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELRE 180

Query: 197 HK--IRVNSICPGLFKSEITEGLMKKD 221
            K  IR  SI PGL ++E    L   D
Sbjct: 181 AKTHIRATSISPGLVETEFAFKLHDND 207

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 1e-25
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 18/255 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTG ++ +G      L  AG R+       D   ++   + +      RA  +
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGE------RARFI 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D++ + AAIE +V      FGR+D LVN A     +   L  +  +W   +  NL  +
Sbjct: 58  ATDITDD-AAIERAVATVVARFGRVDILVNLACTY--LDDGLASSRADWLAALDVNLVSA 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            ++++     +  A   G+++N +SI+A    Q  G   Y +SKA +  +T+ ++++L  
Sbjct: 115 AMLAQAAHPHL--ARGGGAIVNFTSISAKF-AQ-TGRWLYPASKAAIRQLTRSMAMDLAP 170

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDW--LNNVASRTYPLRDFGTTDPA-LTSLVRYLVHD 253
             IRVNS+ PG   S + + L   D    + VA+  + L   G  DP  +  +V +L  D
Sbjct: 171 DGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVG--DPEEVAQVVAFLCSD 228

Query: 254 SSEYVSGNIFIVDSG 268
           ++ +V+G  + VD G
Sbjct: 229 AASFVTGADYAVDGG 243

Length = 261

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  104 bits (262), Expect = 2e-25
 Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 14/259 (5%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
             +VV +TG + G+GR      A AG R++   R  +  K L + +  +       ++V+
Sbjct: 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEH------LSVQ 321

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            D++   AA+E++  +    +GR+D LVNNAG++   K  L+ + E++  +   NL+G++
Sbjct: 322 ADITDE-AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAF 380

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
             ++     M      G ++N+ SI   S   LP   AY +SKA +  +++ L+ E    
Sbjct: 381 ACARAAARLMSQG---GVIVNLGSI--ASLLALPPRNAYCASKAAVTMLSRSLACEWAPA 435

Query: 198 KIRVNSICPGLFKSEITEGLMKKDWLN-NVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
            IRVN++ PG  ++     L      + +   R  PL   G  +  +   + +L   ++ 
Sbjct: 436 GIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPE-EVAEAIAFLASPAAS 494

Query: 257 YVSGNIFIVDSGATLPGLP 275
           YV+G    VD G T  G  
Sbjct: 495 YVNGATLTVDGGWTAFGDA 513

Length = 520

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  101 bits (253), Expect = 2e-25
 Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 32/264 (12%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KV +VTG S G+G+              A   R+    S     + +  S       
Sbjct: 4   LKDKVAIVTGGSQGIGK--------------AVVNRLKEEGSNVINFDIKEPSYNDVDYF 49

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLTG 135
           ++DVS N   +   +      +GRID LVNNAG+       +   E +EW+ I+  N+ G
Sbjct: 50  KVDVS-NKEQVIKGIDYVISKYGRIDILVNNAGIE--SYGAIHAVEEDEWDRIINVNVNG 106

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L+SKY  I       +G +INI+S+ + +  +     AY +SK  +  +T+ ++++  
Sbjct: 107 IFLMSKYT-IPYMLKQDKGVIINIASVQSFAVTR--NAAAYVTSKHAVLGLTRSIAVDYA 163

Query: 196 VHKIRVNSICPGLFKS---------EITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
              IR  ++CPG  ++         E+ +     +         +P++  G  +  +  +
Sbjct: 164 -PTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPE-EVAYV 221

Query: 247 VRYLVHDSSEYVSGNIFIVDSGAT 270
           V +L  D + +++G    VD G  
Sbjct: 222 VAFLASDLASFITGECVTVDGGLR 245

Length = 258

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  101 bits (253), Expect = 2e-25
 Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 39/271 (14%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAG------CRIVAAARRVDRLKSLCDEINKQSGS 69
            L +KVV+VTG +SG+G    L LA+ G       R        + L++L          
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRAL---------- 53

Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
             RA  V++D++ + A   ++V++    FGRID LVNNAGV+  V   L+   E +   +
Sbjct: 54  QPRAEFVQVDLT-DDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG--LEAGREAFVASL 110

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV-AYASSKAGLNAMTK 188
           + NL   ++++ Y    ++ +   G+++NISS  A + GQ  GG   YA++K    A+T+
Sbjct: 111 ERNLIHYYVMAHYCLPHLKASR--GAIVNISSKTALT-GQ--GGTSGYAAAKGAQLALTR 165

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVA---------SRTYPLRDFGTT 239
             ++ L    +RVN++ P    +E+   L +  W+             +   PL    TT
Sbjct: 166 EWAVALAKDGVRVNAVIP----AEVMTPLYEN-WIATFDDPEAKLAAITAKIPLGHRMTT 220

Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
              +     +L+ + S + +G    VD G  
Sbjct: 221 AEEIADTAVFLLSERSSHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  100 bits (251), Expect = 2e-25
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 12/253 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTG  +GLG+   L LA+AGC IV        +    + I + +    R +++
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGI-----NIVEPTETIEQVTALGRRFLSL 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+      I   +++A   FG ID LVNNAG+    +  ++ +E++W+ +M  N+   
Sbjct: 63  TADLR-KIDGIPALLERAVAEFGHIDILVNNAGLIRR-EDAIEFSEKDWDDVMNLNIKSV 120

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRG-QLPGGVAYASSKAGLNAMTKCLSLELG 195
           + +S+            G +INI+S+ +   G ++P   +Y +SK+G+  +T+ ++ E  
Sbjct: 121 FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTRLMANEWA 177

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            H I VN+I PG   +  T+ L   +  +       P   +G     +  +V +L   +S
Sbjct: 178 KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVV-FLASSAS 236

Query: 256 EYVSGNIFIVDSG 268
           +Y++G    VD G
Sbjct: 237 DYINGYTIAVDGG 249

Length = 253

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 3e-25
 Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 12/253 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV ++TG ++GLG+   + LAKAG  IV              E   Q  +  R    
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE------APETQAQVEALGRKFHF 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
                     I++ V +A E  G ID L+NNAG+    +  L+   ++W+ ++  N    
Sbjct: 60  ITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR-QDLLEFGNKDWDDVININQKTV 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRG-QLPGGVAYASSKAGLNAMTKCLSLELG 195
           + +S+ V  +       G +INI+S+ +   G ++P   +Y +SK+ +  +T+ L+ EL 
Sbjct: 119 FFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVP---SYTASKSAVMGLTRALATELS 175

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            + I VN+I PG   ++ T  L      N       P   +GT D  L     +L   +S
Sbjct: 176 QYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDD-LAGPAIFLSSSAS 234

Query: 256 EYVSGNIFIVDSG 268
           +YV+G    VD G
Sbjct: 235 DYVTGYTLAVDGG 247

Length = 251

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score =   99 bits (249), Expect = 3e-25
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 16/250 (6%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V+VTGAS G+GR     LA  G  I           +S+   I  Q G+   A  ++ DV
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGN---ARLLQFDV 57

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
            A+  A    ++      G    +V NAG++     P  L+EE+W+ ++ TNL G + V 
Sbjct: 58  -ADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPA-LSEEDWDIVIHTNLDGFYNVI 115

Query: 141 KYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
               + M  A Q G +I ++S++    +RGQ    V Y+++KAGL   TK L++EL   K
Sbjct: 116 HPCTMPMIRARQGGRIITLASVSGVMGNRGQ----VNYSAAKAGLIGATKALAVELAKRK 171

Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYV 258
           I VN I PGL  +E+      +  L+  A +T P+   G     + SL  +L+ D + YV
Sbjct: 172 ITVNCIAPGLIDTEMLA--EVEHDLDE-ALKTVPMNRMGQPA-EVASLAGFLMSDGASYV 227

Query: 259 SGNIFIVDSG 268
           +  +  V+ G
Sbjct: 228 TRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =   99 bits (249), Expect = 4e-25
 Identities = 78/258 (30%), Positives = 133/258 (51%), Gaps = 27/258 (10%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSV------RA 73
           +V +VTGA+ G+G      L   G ++V A            +++++ GS V       A
Sbjct: 11  RVALVTGAARGIGLGIAAWLIAEGWQVVLA------------DLDRERGSKVAKALGENA 58

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTN 132
             + +DV A+ A +   V +    FGR+DALV NA ++    + L+ L+   WN ++  N
Sbjct: 59  WFIAMDV-ADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVN 117

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG  L++K+    +R  N  G+++N++S  A  R   P   AYA+SK GL A+T  L++
Sbjct: 118 LTGPMLLAKHCAPYLRAHN--GAIVNLASTRA--RQSEPDTEAYAASKGGLLALTHALAI 173

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
            LG  +IRVN++ PG   +       + + L+      +P    GT +  + ++V +L+ 
Sbjct: 174 SLG-PEIRVNAVSPGWIDAR-DPSQRRAEPLSEADHAQHPAGRVGTVED-VAAMVAWLLS 230

Query: 253 DSSEYVSGNIFIVDSGAT 270
             + +V+G  F+VD G T
Sbjct: 231 RQAGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 99.9 bits (249), Expect = 5e-25
 Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 39/272 (14%)

Query: 16  QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRI-----VAAARRV------DRLKSLCDE 62
           QL NKV +VTG S   G+G   C +LA+AG  I      A  + +      D    L +E
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 63  INKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LT 121
           +  ++G  V +M  ELD++ N A  E  + K  E  G    LVNNA  S    +    LT
Sbjct: 63  L-LKNGVKVSSM--ELDLTQNDAPKE-LLNKVTEQLGYPHILVNNAAYS--TNNDFSNLT 116

Query: 122 EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKA 181
            EE +     N+  + L+S     R  D    G +IN++S     +G + G +AYA++K 
Sbjct: 117 AEELDKHYMVNVRATTLLSSQFA-RGFDKKSGGRIINMTS--GQFQGPMVGELAYAATKG 173

Query: 182 GLNAMTKCLSLELGVHKIRVNSICP-----GLFKSEITEGLMKKDWLNNVASRTYPLRDF 236
            ++A+T  L+ E+    I VN+I P     G    EI +GL+            +P    
Sbjct: 174 AIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPM----------FPFGRI 223

Query: 237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           G    A   L+++L  + +E+++G I   + G
Sbjct: 224 GEPKDA-ARLIKFLASEEAEWITGQIIHSEGG 254

Length = 256

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 99.6 bits (249), Expect = 5e-25
 Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
               +VTGA+ G+G+ +  +LAK G  ++  +R  ++L ++  EI ++ G   + +A   
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAA-- 58

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSW 137
           D SA G  I   ++K  E    I  LVNN G+S ++ +  L+  E+E   I+  N+  + 
Sbjct: 59  DFSA-GDDIYERIEKELEGL-DIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATL 116

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            +++ +   M    ++G+++NISS A       P    Y++SKA L+  ++ L  E    
Sbjct: 117 KMTRLILPGMV-KRKKGAIVNISSFAGLI--PTPLLATYSASKAFLDFFSRALYEEYKSQ 173

Query: 198 KIRVNSICPGLFKSEITEG 216
            I V S+ P L  +++++ 
Sbjct: 174 GIDVQSLLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 99.3 bits (248), Expect = 7e-25
 Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 22/258 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  ++TG +SG+G E        G R+    R    L    +    + G S   +  
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASL----EAARAELGESALVIRA 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           +   + + AA +   Q   EAFGR+DA+  NAGV  A  +PL D  E  ++    TN+ G
Sbjct: 60  D---AGDVAAQKALAQALAEAFGRLDAVFINAGV--AKFAPLEDWDEAMFDRSFNTNVKG 114

Query: 136 SW-LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            + L+   + +    A    S++   SI A     +P    YA+SKA L ++ K LS EL
Sbjct: 115 PYFLIQALLPLLANPA----SIVLNGSINA--HIGMPNSSVYAASKAALLSLAKTLSGEL 168

Query: 195 GVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASR---TYPLRDFGTTDPALTSLVRYL 250
               IRVN++ PG  ++ +   L + +  L+ VA++     PL  FGT +  +   V YL
Sbjct: 169 LPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPE-EIAKAVLYL 227

Query: 251 VHDSSEYVSGNIFIVDSG 268
             D S ++ G+  IVD G
Sbjct: 228 ASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.7 bits (246), Expect = 1e-24
 Identities = 69/261 (26%), Positives = 133/261 (50%), Gaps = 26/261 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +   KV ++TG + G+GR       + G ++   A   +  ++   E+ ++   +++   
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKV---AVLYNSAENEAKELREKGVFTIKC-- 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLT 134
              DV  N   ++ S +   + FGR+D LVNNAG+      P +   EE++N ++K NL 
Sbjct: 59  ---DVG-NRDQVKKSKEVVEKEFGRVDVLVNNAGI--MYLMPFEEFDEEKYNKMIKINLN 112

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G+   + Y  + +   ++ G+++NI+S A        G   YA +KAG+  +T+ L+ EL
Sbjct: 113 GAIYTT-YEFLPLLKLSKNGAIVNIASNAGIGTAA-EGTTFYAITKAGIIILTRRLAFEL 170

Query: 195 GVHKIRVNSICPGLFKSEIT------EGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLV 247
           G + IRVN++ PG  ++++T      E   K ++   N   +T  L+  G  +  + ++V
Sbjct: 171 GKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRN---KTV-LKTTGKPE-DIANIV 225

Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L  D + Y++G + + D G
Sbjct: 226 LFLASDDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 98.1 bits (244), Expect = 2e-24
 Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 18/255 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  +  +VTGAS G+G E    L   G  +     RV++L++L  E+    G  V+   
Sbjct: 3   DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFP 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNL 133
             L   ++   ++   QKA      +D LVNNAG++   K  L   +++E+W+ +++ NL
Sbjct: 59  ANL---SDRDEVKALGQKAEADLEGVDILVNNAGIT---KDGLFVRMSDEDWDSVLEVNL 112

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           T ++ +++ +   M    + G +INI+S+   +    PG   Y +SKAG+   +K L+ E
Sbjct: 113 TATFRLTRELTHPMM-RRRYGRIINITSVVGVTGN--PGQANYCASKAGMIGFSKSLAQE 169

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           +    + VN + PG  +S +T  L  K           P++  G T   + S V YL   
Sbjct: 170 IATRNVTVNCVAPGFIESAMTGKLNDKQ--KEAIMGAIPMKRMG-TGAEVASAVAYLASS 226

Query: 254 SSEYVSGNIFIVDSG 268
            + YV+G    V+ G
Sbjct: 227 EAAYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 98.3 bits (245), Expect = 2e-24
 Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 23/262 (8%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +KV +VTGA  G+G      L + G ++       +  ++  D+++K  G   +A+AV+ 
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG---KAIAVKA 58

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSW 137
           DVS +   +  +V++  + FG ++ +VNNAGV  A  +P++ +TEE+++ +   N+ G  
Sbjct: 59  DVS-DRDQVFAAVRQVVDTFGDLNVVVNNAGV--APTTPIETITEEQFDKVYNINVGGVI 115

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLELG 195
              +      +     G +IN +S A    G +  P    Y+S+K  +  +T+  + +L 
Sbjct: 116 WGIQAAQEAFKKLGHGGKIINATSQA----GVVGNPELAVYSSTKFAVRGLTQTAARDLA 171

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL--------- 246
              I VN+  PG+ K+ +   +  +   N      + +  F   D  L  L         
Sbjct: 172 SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQF-AKDITLGRLSEPEDVANC 230

Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
           V +L    S+Y++G   IVD G
Sbjct: 231 VSFLAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 98.1 bits (244), Expect = 2e-24
 Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 20/261 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD K  ++TG++ G+GR F     + G R+  A   ++  ++   EI         A A+
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPA------ACAI 54

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+ + A+I+  V    + +G ID LVNNA +   +   +D+T E ++ +   N++G+
Sbjct: 55  SLDVT-DQASIDRCVAALVDRWGSIDILVNNAALFD-LAPIVDITRESYDRLFAINVSGT 112

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             + + V   M    + G +IN++S  A  RG+   GV Y ++KA + ++T+   L L  
Sbjct: 113 LFMMQAVARAMIAQGRGGKIINMAS-QAGRRGEALVGV-YCATKAAVISLTQSAGLNLIR 170

Query: 197 HKIRVNSICPGLFKSEITEGL--MKKDWLN-------NVASRTYPLRDFGTTDPALTSLV 247
           H I VN+I PG+   E  +G+      + N        +     P    G  +  LT + 
Sbjct: 171 HGINVNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAED-LTGMA 229

Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L    ++Y+    + VD G
Sbjct: 230 IFLASTDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 98.1 bits (245), Expect = 3e-24
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 20/207 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVEL 78
           KVV++TGA+SG+G+E   +LAK G  ++ A R  ++ +    EI K++G + V  + ++L
Sbjct: 2   KVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDL 61

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
              ++ A++    ++    F R+D L+NNAG+   +  P  LT++ +      N  G +L
Sbjct: 62  ---SSLASVRQFAEEFLARFPRLDILINNAGI---MAPPRRLTKDGFELQFAVNYLGHFL 115

Query: 139 VSKYVCIRMRDANQEGSVINISSIA---ATSRGQLP---------GGVAYASSKAGLNAM 186
           ++  +   ++ A+    ++N+SSIA                       AY  SK      
Sbjct: 116 LTNLLLPVLK-ASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILF 174

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEI 213
           T+ L+  L    + VN++ PG+ ++E+
Sbjct: 175 TRELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 3e-24
 Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 6/193 (3%)

Query: 17  LDNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KVV+VT A+ +G+G        + G R+V +     RL    DE+  + G   R  A
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLG-RVEA 73

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DV++  A ++  +  A E  GR+D LVNNAG+ G     +D+T++EW+ ++   LTG
Sbjct: 74  VVCDVTSE-AQVDALIDAAVERLGRLDVLVNNAGLGGQ-TPVVDMTDDEWSRVLDVTLTG 131

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++  ++     MR     G ++N +S+    R Q  G   YA++KAG+ A+T+C +LE  
Sbjct: 132 TFRATRAALRYMRARGHGGVIVNNASVLGW-RAQ-HGQAHYAAAKAGVMALTRCSALEAA 189

Query: 196 VHKIRVNSICPGL 208
            + +R+N++ P +
Sbjct: 190 EYGVRINAVAPSI 202

Length = 262

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 7e-24
 Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 10/180 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KVV++TGASSG+GR   + +A+AG  +   AR  + L  L  EI  + G    A A 
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGG---TAHAY 425

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
             D++ + AA++++V+      G +D LVNNAG S   +V++  D    ++   M  N  
Sbjct: 426 TCDLT-DSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRF-HDYERTMAVNYF 483

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G+  +   +   MR   + G V+N+SSI   +    P   AY +SKA L+A +   + E 
Sbjct: 484 GAVRLILGLLPHMR-ERRFGHVVNVSSIGVQTNA--PRFSAYVASKAALDAFSDVAASET 540

Length = 657

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 96.6 bits (241), Expect = 1e-23
 Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 8/190 (4%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           VM+TGA+SGLGR   L  A+ G R+  A    +  +     + +  G          DV 
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG---DGFYQRCDVR 59

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK 141
            + + +    Q   E +G ID +VNNAGV+       +L+ E+W+  +  NL G     K
Sbjct: 60  -DYSQLTALAQACEEKWGGIDVIVNNAGVASG-GFFEELSLEDWDWQIAINLMGVVKGCK 117

Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRV 201
              + +    + G ++NI+S+A     Q P   +Y  +KAG+ A+++ L +EL   +I V
Sbjct: 118 -AFLPLFKRQKSGRIVNIASMAGLM--QGPAMSSYNVAKAGVVALSETLLVELADDEIGV 174

Query: 202 NSICPGLFKS 211
           + +CP  F++
Sbjct: 175 HVVCPSFFQT 184

Length = 270

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 96.3 bits (239), Expect = 1e-23
 Identities = 87/266 (32%), Positives = 124/266 (46%), Gaps = 26/266 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE-INKQSGSSVRAMA 75
           LD KV +VTGAS G+GR   + LA  G  +   A    R K   DE I +   +  +A  
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALV---AIHYGRNKQAADETIREIESNGGKAFL 60

Query: 76  VELDVSANGAAIENSVQKAWEAF----------GRIDALVNNAGVSGAVKSPLDLTEEEW 125
           +E D+++    I+  V+K  E              ID LVNNAG+ G   +  + TEE +
Sbjct: 61  IEADLNS----IDG-VKKLVEQLKNELQIRVGTSEIDILVNNAGI-GTQGTIENTTEEIF 114

Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
           + IM  N+   + + +     +R    EG VINISS  A  R    G +AY  SK  LN 
Sbjct: 115 DEIMAVNIKAPFFLIQQTLPLLR---AEGRVINISS--AEVRLGFTGSIAYGLSKGALNT 169

Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS 245
           MT  L+  LG   I VN+I PG  K++I   L+    + N A+ +      G  +  +  
Sbjct: 170 MTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVED-IAD 228

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATL 271
            V +L    S +V+G I  V  G  L
Sbjct: 229 AVAFLASSDSRWVTGQIIDVSGGFCL 254

Length = 254

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 7/201 (3%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           N+V +V G    LG   C  LA+AG  +  A    +  + + DEIN + G        + 
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADA 61

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
               N  ++    +   E F R+D LV +AG++ + K   D    +++  ++ NL G +L
Sbjct: 62  ---TNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKIT-DFELGDFDRSLQVNLVGYFL 117

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
            ++     M     +G +I I+S   + +        Y+++K G   +T+ L+L+L  H 
Sbjct: 118 CAREFSKLMIRDGIQGRIIQINS--KSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHG 175

Query: 199 IRVNSICPG-LFKSEITEGLM 218
           I VNS+  G L KS + + L+
Sbjct: 176 ITVNSLMLGNLLKSPMFQSLL 196

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 95.7 bits (238), Expect = 2e-23
 Identities = 77/256 (30%), Positives = 117/256 (45%), Gaps = 14/256 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR---VDRLKSLCDEINKQSGSSVRA 73
           L NKV +VT ++ G+G      LA+ G  +V ++R+   VDR  +      +  G SV  
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATL----QGEGLSVTG 63

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
               +         E  V  A    G +D LV+NA V+    + LD TEE W+ I+  N+
Sbjct: 64  TVCHV---GKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNV 120

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
             + L++K V   M      GSV+ +SS+AA      PG   Y  SK  L  +TK L+ E
Sbjct: 121 KATALMTKAVVPEMEKRGG-GSVVIVSSVAAFH--PFPGLGPYNVSKTALLGLTKNLAPE 177

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           L    IRVN + PGL K+  +  L     +      T  +R  G  +     +V +L  +
Sbjct: 178 LAPRNIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCA-GIVSFLCSE 236

Query: 254 SSEYVSGNIFIVDSGA 269
            + Y++G   +V  G 
Sbjct: 237 DASYITGETVVVGGGT 252

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 96.4 bits (240), Expect = 3e-23
 Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 40/265 (15%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKQSGSSVR 72
           L  KV +VTGA++GLGR   L LA+ G  +V    A+A        + DEI        +
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDAS---DVLDEIRAAGA---K 63

Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV  D+S    A  + +       G +D +VNNAG++   +   ++++EEW+ ++  +
Sbjct: 64  AVAVAGDISQRATA--DELVATAVGLGGLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVH 120

Query: 133 LTGSWLVSKYVCIRMRDANQE------GSVINISSIA--ATSRGQLPGGVAYASSKAGLN 184
           L G +L+++      R   +       G ++N SS A      GQ      Y ++KAG+ 
Sbjct: 121 LRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ----ANYGAAKAGIT 176

Query: 185 AMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-- 242
           A+T   +  LG + +R N+ICP   ++ +T  +              P  + G  DP   
Sbjct: 177 ALTLSAARALGRYGVRANAICPRA-RTAMTADVFGD----------APDVEAGGIDPLSP 225

Query: 243 --LTSLVRYLVHDSSEYVSGNIFIV 265
             +  LV++L   ++  V+G +FIV
Sbjct: 226 EHVVPLVQFLASPAAAEVNGQVFIV 250

Length = 306

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 94.2 bits (235), Expect = 7e-23
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 20/195 (10%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR---LKSLCDEINKQSGSSVRAM 74
             KVV+VTGA+ G+GR   L  A  G R+V     VDR   +  +  E+    G    A+
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVL----VDRSELVHEVAAELRAAGG---EAL 59

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV--KSPLDLTEEEWNHIMKTN 132
           A+  D+     A + ++  A EAFGRID L+NN G  G +  K   +  EE+    ++ +
Sbjct: 60  ALTADLETYAGA-QAAMAAAVEAFGRIDVLINNVG--GTIWAKPFEEYEEEQIEAEIRRS 116

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L  +    + V   M  A   G+++N+SSIA     ++P    Y+++K G+NA+T  L+ 
Sbjct: 117 LFPTLWCCRAVLPHML-AQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAF 171

Query: 193 ELGVHKIRVNSICPG 207
           E   H IRVN++ PG
Sbjct: 172 EYAEHGIRVNAVAPG 186

Length = 260

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 94.1 bits (234), Expect = 7e-23
 Identities = 76/262 (29%), Positives = 133/262 (50%), Gaps = 25/262 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTG+S G+G      LA+AG  ++   R   +L +  + + K  G S  A+A 
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL-KGQGLSAHALA- 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             DV+ +  A+  ++       G ID LVNNAG+    ++PL D   + +  +++TN++ 
Sbjct: 66  -FDVT-DHDAVRAAIDAFEAEIGPIDILVNNAGMQ--FRTPLEDFPADAFERLLRTNISS 121

Query: 136 SWLVSKYVCIRM--RDANQEGSVINISSI-AATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
            + V + V   M  R A   G +INI+S+ +A +R   PG   Y ++K  +  +TK ++ 
Sbjct: 122 VFYVGQAVARHMIARGA---GKIINIASVQSALAR---PGIAPYTATKGAVGNLTKGMAT 175

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLRDFGTTDPALTSLVR 248
           +   H ++ N+I PG F + +   L+       WL     RT P   +G  +  + + V 
Sbjct: 176 DWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLE---KRT-PAGRWGKVEELVGACV- 230

Query: 249 YLVHDSSEYVSGNIFIVDSGAT 270
           +L  D+S +V+G++  VD G T
Sbjct: 231 FLASDASSFVNGHVLYVDGGIT 252

Length = 255

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 94.2 bits (235), Expect = 7e-23
 Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 52/280 (18%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA- 75
           L  K  +VTG + G+G      L +AG R+V  AR              +       +  
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS-------------RPDDLPEGVEF 53

Query: 76  VELDVS-ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL----DLTEEEWNHIMK 130
           V  D++ A G A     +   E  G +D LV+  G S    +P      LT+EEW   + 
Sbjct: 54  VAADLTTAEGCAA--VARAVLERLGGVDILVHVLGGS---SAPAGGFAALTDEEWQDELN 108

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMTKC 189
            NL  +  + + +   M  A   G +I+++SI       LP    AYA++KA L+  +K 
Sbjct: 109 LNLLAAVRLDRALLPGMI-ARGSGVIIHVTSIQRRL--PLPESTTAYAAAKAALSTYSKS 165

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKK-----------------DWLNNVASRTYP 232
           LS E+    +RVN++ PG  ++E    L ++                 D L  +     P
Sbjct: 166 LSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGI-----P 220

Query: 233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP 272
           L      +  +  L+ +L  D +  ++G  +++D G T+P
Sbjct: 221 LGRPAEPE-EVAELIAFLASDRAASITGTEYVID-GGTVP 258

Length = 260

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 93.4 bits (233), Expect = 1e-22
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 19/203 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  KVV+VTGA+ G+GR F   L   G   V AAAR  + +  L            R + 
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGP----------RVVP 53

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           ++LDV+ + A++  + + A      +  LVNNAG+       L+  E+     M+TN  G
Sbjct: 54  LQLDVT-DPASVAAAAEAA----SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFG 108

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              +++     +  AN  G+++N+ S+   S    P    Y++SKA   ++T+ L  EL 
Sbjct: 109 PLAMARAFAPVLA-ANGGGAIVNVLSVL--SWVNFPNLGTYSASKAAAWSLTQALRAELA 165

Query: 196 VHKIRVNSICPGLFKSEITEGLM 218
               RV  + PG   +++  GL 
Sbjct: 166 PQGTRVLGVHPGPIDTDMAAGLD 188

Length = 238

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 93.4 bits (232), Expect = 1e-22
 Identities = 49/193 (25%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L++++++VTGAS G+GRE  L  A+ G  ++   R  ++L+ + D IN++ G   +   +
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L  +      +   Q+    + R+D +++NAG+ G V    +   + W  + + N+  +
Sbjct: 62  DLL-TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV--AYASSKAGLNAMTKCLSLEL 194
           +++++   + +   +  GS++  SS    S G+       AYA SK     + + L+ E 
Sbjct: 121 FMLTQ-ALLPLLLKSDAGSLVFTSS----SVGRQGRANWGAYAVSKFATEGLXQVLADEY 175

Query: 195 GVHKIRVNSICPG 207
               +RVN I PG
Sbjct: 176 QQRNLRVNCINPG 188

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.2 bits (232), Expect = 1e-22
 Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 27/266 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAM 74
           Q+  + V+VTG S GLG       A+ G R+V    +  D  ++L DE+        RA+
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGD------RAI 55

Query: 75  AVELDVSANGAAIENSVQKAWEAFGR-IDALVNNAGVS-----GAVKSPLDLTEEEWNHI 128
           A++ DV+ +   ++     A E FG+ I  +VNNA         A K   D+T E++   
Sbjct: 56  ALQADVT-DREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQ 114

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA----YASSKAGLN 184
           ++ ++ G+    +     MR     G +INI     T+  Q P  V     Y ++KA L 
Sbjct: 115 LEGSVKGALNTIQAALPGMR-EQGFGRIINIG----TNLFQNP--VVPYHDYTTAKAALL 167

Query: 185 AMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALT 244
            +T+ L+ ELG + I VN +  GL ++         +  + +A+ T PLR   TT     
Sbjct: 168 GLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATT-PLRKV-TTPQEFA 225

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGAT 270
             V +     +  V+G   +VD G  
Sbjct: 226 DAVLFFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 93.8 bits (234), Expect = 1e-22
 Identities = 66/197 (33%), Positives = 96/197 (48%), Gaps = 32/197 (16%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +KV +VTGASSG+GR     LA+AG R+   +R   R   +           V    +EL
Sbjct: 4   SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---------PGVE--LLEL 52

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEE----EWNHIMKTN 132
           DV+ + A+++ +V +     GRID LVNNAGV   GA        EE    +   +  TN
Sbjct: 53  DVT-DDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAA-------EESSIAQAQALFDTN 104

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG--GVAYASSKAGLNAMTKCL 190
           + G   +++ V   MR A   G +INISS+     G LP      YA+SK  +   ++ L
Sbjct: 105 VFGILRMTRAVLPHMR-AQGSGRIINISSVL----GFLPAPYMALYAASKHAVEGYSESL 159

Query: 191 SLELGVHKIRVNSICPG 207
             E+    IRV+ + P 
Sbjct: 160 DHEVRQFGIRVSLVEPA 176

Length = 270

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 92.8 bits (231), Expect = 4e-22
 Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 32/204 (15%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-----------ARRVDRLKSLCDEIN 64
           +L  KV ++TG  SG+GR   +  AK G  I               +RV+          
Sbjct: 43  KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE---------- 92

Query: 65  KQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE 124
            + G  V+ + +  DVS + A  +++V++     GR+D LVNNA      +S  D+T E+
Sbjct: 93  -KEG--VKCLLIPGDVS-DEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQ 148

Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKAGL 183
            +   KTN+   + ++K     ++   Q  ++IN  SI        L   + Y+++K  +
Sbjct: 149 LDKTFKTNIYSYFHMTKAALPHLK---QGSAIINTGSITGYEGNETL---IDYSATKGAI 202

Query: 184 NAMTKCLSLELGVHKIRVNSICPG 207
           +A T+ L+  L    IRVN++ PG
Sbjct: 203 HAFTRSLAQSLVQKGIRVNAVAPG 226

Length = 290

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 91.8 bits (228), Expect = 5e-22
 Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 38/265 (14%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V+VTGA+ G+GR     L +AG  ++A                             LDV 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDL----------PFVLLLEYGDPLRLTPLDV- 49

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           A+ AA+     +     G IDALVN AGV   GA      L+ E+W      N+TG + +
Sbjct: 50  ADAAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDP---LSTEDWEQTFAVNVTGVFNL 106

Query: 140 SKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
            + V   M+D  + G+++ ++S AA   R  +    AY +SKA L +++KCL LEL  + 
Sbjct: 107 LQAVAPHMKD-RRTGAIVTVASNAAHVPRISM---AAYGASKAALASLSKCLGLELAPYG 162

Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTY-----------PLRDFGTTDPA-LTSL 246
           +R N + PG   + +   L   +   + A++             PL       PA + + 
Sbjct: 163 VRCNVVSPGSTDTAMQRTLWHDE---DGAAQVIAGVPEQFRLGIPLGKIAQ--PADIANA 217

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATL 271
           V +L  D + +++ +  +VD GATL
Sbjct: 218 VLFLASDQAGHITMHDLVVDGGATL 242

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 90.9 bits (226), Expect = 1e-21
 Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 31/262 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           QL+ +V +VTG SSG+G      L +AG  +    R  +RL S    + ++   + R +A
Sbjct: 5   QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGA-RLLA 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV  + A +          FG +D LVNNAG  G V +  D T++ W   ++     
Sbjct: 64  ARCDV-LDEADVAAFAAAVEARFGGVDMLVNNAG-QGRVSTFADTTDDAWRDELELKYFS 121

Query: 136 SWLVSKYVCIRMRDA-------NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
                    I    A       +   S++ ++S+ A      P  VA ++++AGL  + K
Sbjct: 122 --------VINPTRAFLPLLRASAAASIVCVNSLLA--LQPEPHMVATSAARAGLLNLVK 171

Query: 189 CLSLELGVHKIRVNSICPGL---------FKSEITEGLMKKDWLNNVAS-RTYPLRDFGT 238
            L+ EL    +RVNSI  GL         +++    G   + W   +A  +  PL   G 
Sbjct: 172 SLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGR 231

Query: 239 TDPALTSLVRYLVHDSSEYVSG 260
            D A  +L  +L    S Y +G
Sbjct: 232 PDEAARALF-FLASPLSSYTTG 252

Length = 265

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 90.8 bits (226), Expect = 1e-21
 Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 22/202 (10%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V +TGASSG+G+    + A+ G  +   ARR D L++    + K +  SV A     DV 
Sbjct: 5   VFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYA----ADV- 59

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE-----WNHIMKTNLTGS 136
            +  A+  +      A G  D ++ NAG+S        LTEE      +  +M TN  G 
Sbjct: 60  RDADALAAAAADFIAAHGLPDVVIANAGISVGT-----LTEEREDLAVFREVMDTNYFG- 113

Query: 137 WLVSKY--VCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +V+ +      MR A + G+++ I+S+A   RG LPG  AY++SKA      + L +EL
Sbjct: 114 -MVATFQPFIAPMRAARR-GTLVGIASVAGV-RG-LPGAGAYSASKAAAIKYLESLRVEL 169

Query: 195 GVHKIRVNSICPGLFKSEITEG 216
               +RV +I PG  ++ +T  
Sbjct: 170 RPAGVRVVTIAPGYIRTPMTAH 191

Length = 257

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 90.4 bits (225), Expect = 1e-21
 Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 19/204 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           + +++TGASSGLG     + A  G  +   ARR DRL+ L  E+  +    ++     LD
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY-PGIKVAVAALD 61

Query: 80  VSANGAAIENSVQKAWEAF----GRIDALVNNAGV-SGAVKSPLDLTEEEWNHI-MKTNL 133
           V+ +       V + +  F    G +D ++ NAG+  GA    L   +   N    +TN 
Sbjct: 62  VNDHDQ-----VFEVFAEFRDELGGLDRVIVNAGIGKGA---RLGTGKFWANKATAETNF 113

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV-AYASSKAGLNAMTKCLSL 192
             + L      + +      G ++ ISS++A  RG LPG   AYA+SKAG+ ++ + L  
Sbjct: 114 VAA-LAQCEAAMEIFREQGSGHLVLISSVSA-VRG-LPGVKAAYAASKAGVASLGEGLRA 170

Query: 193 ELGVHKIRVNSICPGLFKSEITEG 216
           EL    I+V++I PG  +SE+   
Sbjct: 171 ELAKTPIKVSTIEPGYIRSEMNAK 194

Length = 248

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 90.5 bits (225), Expect = 2e-21
 Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 6/196 (3%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K   VTGA+SG+GR   L LA  G  +    R  D L     +  +  G +V      LD
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADA-RALGGTV-PEHRALD 58

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           +S +  A+         A G +D ++N AG+S A  +   LT E+W  ++  NL G   V
Sbjct: 59  IS-DYDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHV 116

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
            +     M  A + G ++N+SS A      LP   AY++SK GL  +++ L  +L  H I
Sbjct: 117 IETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSASKFGLRGLSEVLRFDLARHGI 174

Query: 200 RVNSICPGLFKSEITE 215
            V+ + PG  K+ +  
Sbjct: 175 GVSVVVPGAVKTPLVN 190

Length = 272

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 90.1 bits (223), Expect = 2e-21
 Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 16/261 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTGAS G+GR     LA  G  + +    R +  +    EI    GS+  ++ 
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIG 60

Query: 76  VELD----VSANGAAIENSVQKAWEAFGRIDALVNNAGVS-GAVKSPLDLTEEEWNHIMK 130
             L+    V A  ++++N +Q       + D L+NNAG+  GA     + TE+ ++ ++ 
Sbjct: 61  ANLESLHGVEALYSSLDNELQNR-TGSTKFDILINNAGIGPGAFIE--ETTEQFFDRMVS 117

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N    + + +    R+RD ++   +INISS  A +R  LP  +AY+ +K  +N MT  L
Sbjct: 118 VNAKAPFFIIQQALSRLRDNSR---IINISS--AATRISLPDFIAYSMTKGAINTMTFTL 172

Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           + +LG   I VN+I PG  K+++   L+    +   A+        G  +  +     +L
Sbjct: 173 AKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVED-IADTAAFL 231

Query: 251 VHDSSEYVSGNIFIVDSGATL 271
               S +V+G +  V  G+ L
Sbjct: 232 ASPDSRWVTGQLIDVSGGSCL 252

Length = 252

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 90.8 bits (226), Expect = 3e-21
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 18/191 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KVV+VTGA+ G+G E    L   G ++         L +L  E+    G   R + V
Sbjct: 7   LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL----GGDDRVLTV 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTG 135
             DV+ + AA++ + ++A E FG ID +V NAG+  A       +  + +  ++  NL G
Sbjct: 63  VADVT-DLAAMQAAAEEAVERFGGIDVVVANAGI--ASGGSVAQVDPDAFRRVIDVNLLG 119

Query: 136 SWLVSKY---VCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
            +   +      I  R     G V+ +SS+AA +    PG  AY +SKAG+ A    L L
Sbjct: 120 VFHTVRATLPALIERR-----GYVLQVSSLAAFAAA--PGMAAYCASKAGVEAFANALRL 172

Query: 193 ELGVHKIRVNS 203
           E+  H + V S
Sbjct: 173 EVAHHGVTVGS 183

Length = 296

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 89.7 bits (222), Expect = 3e-21
 Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 20/257 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRVDRLKSLCDEINKQSGSSV 71
           +  ++  VTG   G+G   C  L K G ++VA     + RRV  L+        Q     
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLE-------DQKALGF 53

Query: 72  RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT 131
             +A E +V  +  + + +  K     G ID LVNNAG++  V     +T E+W  ++ T
Sbjct: 54  DFIASEGNV-GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFR-KMTREDWTAVIDT 111

Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           NLT  + V+K V   M +    G +INISS+    +GQ  G   Y+++KAG++  T  L+
Sbjct: 112 NLTSLFNVTKQVIDGMVERGW-GRIINISSVNG-QKGQF-GQTNYSTAKAGIHGFTMSLA 168

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
            E+    + VN++ PG   +++ + + + D L  + + T P+R  G+ D  + S+V +L 
Sbjct: 169 QEVATKGVTVNTVSPGYIGTDMVKAI-RPDVLEKIVA-TIPVRRLGSPD-EIGSIVAWLA 225

Query: 252 HDSSEYVSGNIFIVDSG 268
            + S + +G  F ++ G
Sbjct: 226 SEESGFSTGADFSLNGG 242

Length = 246

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 89.0 bits (221), Expect = 4e-21
 Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 23/203 (11%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           +K V+VTGA+ G+G+ F   L   G  ++ AA R           +  + G  V  + + 
Sbjct: 3   DKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSA----AHLVAKYGDKV--VPLR 56

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW----NHIMKTNL 133
           LDV+ +  +I+ +  +A +    +D ++NNAGV      P  L EE         M  N+
Sbjct: 57  LDVT-DPESIKAAAAQAKD----VDVVINNAGVL----KPATLLEEGALEALKQEMDVNV 107

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G   +++     ++ AN  G+++N++S+A+      P    Y++SK+   ++T+ L  E
Sbjct: 108 FGLLRLAQAFAPVLK-ANGGGAIVNLNSVASLK--NFPAMGTYSASKSAAYSLTQGLRAE 164

Query: 194 LGVHKIRVNSICPGLFKSEITEG 216
           L      V S+ PG   + +  G
Sbjct: 165 LAAQGTLVLSVHPGPIDTRMAAG 187

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 88.5 bits (220), Expect = 9e-21
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L +K V++TGAS G+G+     LA AG R++   R  ++L++L   +        R + 
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGR--HRWVV 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
            +L   A   A    V       G I+ L+NNAGV+    + L D   E    ++  NLT
Sbjct: 60  ADLTSEAGREA----VLARAREMGGINVLINNAGVNHF--ALLEDQDPEAIERLLALNLT 113

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
               +++ +   +R A     V+N+ S    S G  PG  +Y +SK  L   ++ L  EL
Sbjct: 114 APMQLTRALLPLLR-AQPSAMVVNVGSTFG-SIG-YPGYASYCASKFALRGFSEALRREL 170

Query: 195 GVHKIRV 201
               +RV
Sbjct: 171 ADTGVRV 177

Length = 263

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 88.7 bits (220), Expect = 1e-20
 Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 17/264 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  KV +VTG ++G+G        K G ++     + D  +++CD +    G       
Sbjct: 15  RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL----GGEPNVCF 70

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLT 134
              DV+     +  +V    + FG +D +VNNAG++G     +   E  E+  +   N+ 
Sbjct: 71  FHCDVTVE-DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVK 129

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G +L  K+   R+    ++GS++++ S+A+   G  P   AY  SK  +  +T+ ++ EL
Sbjct: 130 GVFLGMKHAA-RIMIPLKKGSIVSLCSVASAIGGLGPH--AYTGSKHAVLGLTRSVAAEL 186

Query: 195 GVHKIRVNSICP-----GLFKSEITEGLMKKDWL---NNVASRTYPLRDFGTTDPALTSL 246
           G H IRVN + P      L  + + E    +D L      A +   L+    T   + + 
Sbjct: 187 GKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANA 246

Query: 247 VRYLVHDSSEYVSGNIFIVDSGAT 270
           V +L  D + Y+SG   ++D G T
Sbjct: 247 VLFLASDEARYISGLNLMIDGGFT 270

Length = 280

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)

Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
             L  +V ++TG  SG+GR         G R+    R  ++L SL              +
Sbjct: 2   GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGD------HVL 55

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV----SGAVKSPLDLTEEEWNHIMK 130
            VE DV+ + A  + +V +  +AFG++D  V NAG+    +  V  P +  +  ++ I  
Sbjct: 56  VVEGDVT-SYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFN 114

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N+ G  L +K   +    A+  GS+I   S ++   G   GG  Y +SK  +  + + L
Sbjct: 115 VNVKGYLLGAK-AALPALKAS-GGSMIFTLSNSSFYPGG--GGPLYTASKHAVVGLVRQL 170

Query: 191 SLELGVHKIRVNSICPG 207
           + EL    IRVN + PG
Sbjct: 171 AYELAPK-IRVNGVAPG 186

Length = 263

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 16/213 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMA 75
           L  K+ +VTGAS G+GR   L L +AG  +    R +  +L    +EI  + G   + + 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGG---KCIP 57

Query: 76  VELDVSANGAAIENSVQK-AWEAFGRIDALVNNA------GVSGAVKSPLDLTEEEWNHI 128
           V  D  ++   +E   ++ A E  GR+D LVNNA       + G  K   +     W+ I
Sbjct: 58  VRCD-HSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDI 116

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
               L   +  S Y    M  A + G ++ ISS       +    VAY   KA ++ M  
Sbjct: 117 NNVGLRAHYACSVYAAPLMVKAGK-GLIVIISSTGGL---EYLFNVAYGVGKAAIDRMAA 172

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKD 221
            ++ EL  H + V S+ PG  ++E+   + + D
Sbjct: 173 DMAHELKPHGVAVVSLWPGFVRTELVLEMPEDD 205

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 87.1 bits (216), Expect = 2e-20
 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 14/190 (7%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           +V+VTGA++G G        + G +++A  RR +RL+ L DE+    G ++     +LDV
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNL--YIAQLDV 55

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
             N AAIE  +      +  ID LVNNAG++  ++     + E+W  ++ TN  G   ++
Sbjct: 56  R-NRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLP--GGVAYASSKAGLNAMTKCLSLELGVHK 198
           + V   M + N  G +INI S A    G  P  GG  Y ++KA +   +  L  +L    
Sbjct: 115 RAVLPGMVERNH-GHIINIGSTA----GSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 199 IRVNSICPGL 208
           +RV  I PGL
Sbjct: 170 VRVTDIEPGL 179

Length = 248

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 19/199 (9%)

Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA 82
            +TGASSG GR     L   G R+ A  RR D L    D++  + G  +    ++LDV+ 
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPDAL----DDLKARYGDRLWV--LQLDVT- 58

Query: 83  NGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
           + AA+   V +A+ A GRID +V+NAG    GA +   +L++ +    + TNL GS  V 
Sbjct: 59  DSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAE---ELSDAQIRRQIDTNLIGSIQVI 115

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLELGVHK 198
           +     +R     G ++ +SS      GQ+  PG   Y ++K G+    + ++ E+    
Sbjct: 116 RAALPHLR-RQGGGRIVQVSS----EGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFG 170

Query: 199 IRVNSICPGLFKSEITEGL 217
           I    + PG  ++    GL
Sbjct: 171 IEFTIVEPGPARTNFGAGL 189

Length = 276

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 23/224 (10%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K +++TGA SG GRE  L LA+ G  ++A  +   ++ +L  E   + G ++R    +LD
Sbjct: 3   KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEA-ARRGLALR--VEKLD 59

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKS-PLDLTEEEWNHIMKTNLTGS 136
           ++           +A E    +D L+NNAG+  +GAV   P++L  E +    +TN+ G 
Sbjct: 60  LTD-----AIDRAQAAEW--DVDVLLNNAGIGEAGAVVDIPVELVRELF----ETNVFGP 108

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +++    +M  A  +G V+  SS+A    G  P   AY +SK  L A+ + +  EL  
Sbjct: 109 LELTQGFVRKMV-ARGKGKVVFTSSMAGLITG--PFTGAYCASKHALEAIAEAMHAELKP 165

Query: 197 HKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGT 238
             I+V ++ PG + +   + + +  K W +  A       D   
Sbjct: 166 FGIQVATVNPGPYLTGFNDTMAETPKRWYDP-ARNFTDPEDLAF 208

Length = 257

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 86.5 bits (215), Expect = 4e-20
 Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 20/199 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +++++VTGA  G+GRE  L  A+ G  ++   R  ++L+++ DEI    G   +   +
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP--QPAII 67

Query: 77  ELDVSANGAAIENSVQKA---WEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTN 132
            LD+    A  +N  Q A    E FGR+D +++NAG+ G +  P++    E W  +M+ N
Sbjct: 68  PLDLL--TATPQNYQQLADTIEEQFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVN 124

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP----GGVAYASSKAGLNAMTK 188
           +  ++++++ +   +  +    S++  SS    S G+      G  AYA SK     M +
Sbjct: 125 VNATFMLTQALLPLLLKS-PAASLVFTSS----SVGRQGRANWG--AYAVSKFATEGMMQ 177

Query: 189 CLSLELGVHKIRVNSICPG 207
            L+ E     +RVN I PG
Sbjct: 178 VLADEYQGTNLRVNCINPG 196

Length = 247

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 23/190 (12%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL- 78
              ++TGAS G+G     +LA     ++   R  +RL  L  E+            V+L 
Sbjct: 4   PTALITGASRGIGAAIARELAPTH-TLLLGGRPAERLDELAAEL-----PGATPFPVDLT 57

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSW 137
           D  A  AA+        E  GR+D LV+NAGV  A   P+ + T +EW   ++ N+    
Sbjct: 58  DPEAIAAAV--------EQLGRLDVLVHNAGV--ADLGPVAESTVDEWRATLEVNVVAPA 107

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            +++ +   +R A   G V+ I+S A       PG  +YA+SK  L A+   L  E   +
Sbjct: 108 ELTRLLLPALRAA--HGHVVFINSGAG--LRANPGWGSYAASKFALRALADALREEEPGN 163

Query: 198 KIRVNSICPG 207
            +RV S+ PG
Sbjct: 164 -VRVTSVHPG 172

Length = 227

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 3e-19
 Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 28/267 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  K V++TGAS G+G       A  GC +   AR  D L++L  ++    G  V   A
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK--SPLDLTEEEWNHIMKTNL 133
           ++L           + ++     G ID LVNNA   GA+      D+ +  W    +  +
Sbjct: 64  LDLSSPE-------AREQLAAEAGDIDILVNNA---GAIPGGGLDDVDDAAWRAGWELKV 113

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G   +++    RM+ A   G ++N+  I A         +  ++  A L A T+ L  +
Sbjct: 114 FGYIDLTRLAYPRMK-ARGSGVIVNV--IGAAGENPDADYICGSAGNAALMAFTRALGGK 170

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKD----------WLNNVASRTYPLRDFGTTDPAL 243
                +RV  + PG   ++    L+K            W   +A    PL    T +  +
Sbjct: 171 SLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG--LPLGRPATPE-EV 227

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGAT 270
             LV +L    S Y SG +  VD G +
Sbjct: 228 ADLVAFLASPRSGYTSGTVVTVDGGIS 254

Length = 259

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.3 bits (206), Expect = 5e-19
 Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 26/259 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K V + G S GLG        K G ++   +R  ++LK     + K          
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLK----RMKKTLSKYGNIHY 57

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEEWNHIMKTNL 133
           V  DVS+  +A  N ++KA +    ID LV   G  V   V+    L E   NHI K  L
Sbjct: 58  VVGDVSSTESA-RNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHI-KIPL 115

Query: 134 TGSWLVSKYVCIRMRDANQEGS-VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
                        ++    EGS ++ +SS++   +   P  ++YA +KAGL    + L+ 
Sbjct: 116 ----YAVNASLRFLK----EGSSIVLVSSMSGIYKA-SPDQLSYAVAKAGLAKAVEILAS 166

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           EL    IRVN I P     +       ++W      +   L D          ++ +L+ 
Sbjct: 167 ELLGRGIRVNGIAPTTISGDFEPE---RNW-----KKLRKLGDDMAPPEDFAKVIIWLLT 218

Query: 253 DSSEYVSGNIFIVDSGATL 271
           D +++V G +  VD GA L
Sbjct: 219 DEADWVDGVVIPVDGGARL 237

Length = 238

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 83.4 bits (207), Expect = 7e-19
 Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLK----SLCDEINKQSGS 69
           L  K + +TGAS G+G    L  A+ G  IV AA+  +   +L     +  +EI    G 
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG- 62

Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
             +A+ +  DV  +   +  +V KA E FG ID  VNNA     +    D   + ++ + 
Sbjct: 63  --QALPLVGDVR-DEDQVAAAVAKAVERFGGIDICVNNASAI-NLTGTEDTPMKRFDLMQ 118

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           + N+ G++LVS+  C+     ++   ++ +S              AY  +K G++  T  
Sbjct: 119 QINVRGTFLVSQA-CLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLG 177

Query: 190 LSLELGVHKIRVNSICP 206
           L+ E     I VN++ P
Sbjct: 178 LAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 1e-18
 Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 16/217 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
            VV++TG SSG+GR        AG  + A AR+ + +++L       +G +    AV+LD
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-----AAAGFT----AVQLD 52

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           V+ +GAA+    ++     G +D L+NNAG  GA+   LD   E      +TN+     V
Sbjct: 53  VN-DGAALARLAEELEAEHGGLDVLINNAGY-GAMGPLLDGGVEAMRRQFETNVFAVVGV 110

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++ +   +R +   G V+NI S++        G  AY +SKA ++A++  L LEL    +
Sbjct: 111 TRALFPLLRRS--RGLVVNIGSVSGVLVTPFAG--AYCASKAAVHALSDALRLELAPFGV 166

Query: 200 RVNSICPGLFKSEITEGLMKK-DWLNNVASRTYPLRD 235
           +V  + PG   S+      ++ + L    S  +PLR+
Sbjct: 167 QVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLRE 203

Length = 274

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 1e-18
 Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 14/187 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K +++TGASSG+G       A+ G  +VA ARR D L ++ D I +  G    AMAV
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGD---AMAV 94

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MKTNL 133
             D+S +  A++  V    +  G +D L+NNAG S  ++ PL  + + W+ +   M  N 
Sbjct: 95  PCDLS-DLDAVDALVADVEKRIGGVDILINNAGRS--IRRPLAESLDRWHDVERTMVLNY 151

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
                + + +   M +   +G +IN+++    S    P    Y +SKA L+A+++ +  E
Sbjct: 152 YAPLRLIRGLAPGMLERG-DGHIINVATWGVLS-EASPLFSVYNASKAALSAVSRVIETE 209

Query: 194 L---GVH 197
               GVH
Sbjct: 210 WGDRGVH 216

Length = 293

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 81.6 bits (202), Expect = 2e-18
 Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 37/233 (15%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L    V++TG +SG+G        +AG  ++   RR +RL        K+   ++  + 
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEA-----KKELPNIHTI- 55

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS-----GAVKSPLDLTEEEWNHIMK 130
             LDV  +  ++E   +     +  +D L+NNAG+          S LD  + E    + 
Sbjct: 56  -VLDV-GDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE----ID 109

Query: 131 TNLTGSWLVSKYVCIRMRDA-------NQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
           TNL G         IR+  A         E +++N+SS  A     +     Y ++KA L
Sbjct: 110 TNLIGP--------IRLIKAFLPHLKKQPEATIVNVSSGLAFV--PMAANPVYCATKAAL 159

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDF 236
           ++ T  L  +L    + V  I P    +E+ E     D       R  PL +F
Sbjct: 160 HSYTLALRHQLKDTGVEVVEIVPPAVDTELHEERRNPDGGTP---RKMPLDEF 209

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 57/201 (28%), Positives = 83/201 (41%), Gaps = 12/201 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L  KVV +TG + G+G      LA  G R+          K    E+          + 
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVVG 54

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             LDV+ + A+    +       G ID LVNNAGV   V   LD  +     I+  N+ G
Sbjct: 55  GPLDVT-DPASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYG 112

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
             L SK    RM      G V+N++S+A   +  +PG   Y +SK  +   T    LEL 
Sbjct: 113 VILGSKLAAPRMV-PRGRGHVVNVASLA--GKIPVPGMATYCASKHAVVGFTDAARLELR 169

Query: 196 VHKIRVNSICPGLFKSEITEG 216
              + V+ + P    +E+  G
Sbjct: 170 GTGVHVSVVLPSFVNTELIAG 190

Length = 273

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 82.1 bits (203), Expect = 2e-18
 Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 25/262 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  +VV+VTG +SGLGR         G R+    +    L+ L      ++      + 
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQEL------EAAHGDAVVG 55

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV----SGAVKSPLDLTEEEWNHIMKT 131
           VE DV +     + +V +   AFG+ID L+ NAG+    +  V  P D  +E ++ +   
Sbjct: 56  VEGDVRSL-DDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHI 114

Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           N+ G  L  K   +    A++   +  IS+      G   GG  Y ++K  +  + K L+
Sbjct: 115 NVKGYLLAVK-AALPALVASRGSVIFTISNAGFYPNG---GGPLYTAAKHAVVGLVKELA 170

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY-L 250
            EL  + +RVN + PG   S++  G      + + +  T PL D       L S++    
Sbjct: 171 FELAPY-VRVNGVAPGGMSSDL-RGPKSLG-MADKSISTVPLGDM------LKSVLPIGR 221

Query: 251 VHDSSEYVSGNIFIVDSGATLP 272
           + D+ EY    +F    G T+P
Sbjct: 222 MPDAEEYTGAYVFFATRGDTVP 243

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 82.2 bits (203), Expect = 3e-18
 Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 28/267 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV--------AAARRVDRLKSLCDEINKQS 67
           +L  +  ++TGA SG+GR   +  A+ G  I           A  V +L        +  
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI-------QAE 104

Query: 68  GSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNH 127
           G   +A+A+  D+  + A     V++A +  G +D LVN AG   AVK   D+T E+++ 
Sbjct: 105 GR--KAVALPGDLK-DEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDA 161

Query: 128 IMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
             KTN+   + + K     +       S+IN  SI +      P  + YAS+KA + A T
Sbjct: 162 TFKTNVYAMFWLCKAAIPHLPPG---ASIINTGSIQSYQPS--PTLLDYASTKAAIVAFT 216

Query: 188 KCLSLELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPA-LTS 245
           K L+ ++    IRVN++ PG   + +   G    + + +  S T P++  G   P  +  
Sbjct: 217 KALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSET-PMKRPG--QPVEMAP 273

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATLP 272
           L   L    S YV+G +F V  G  L 
Sbjct: 274 LYVLLASQESSYVTGEVFGVTGGLLLS 300

Length = 300

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 81.3 bits (201), Expect = 8e-18
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 31/204 (15%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L   VV++TGASSG+G+      A+ G R+V AAR  + L+++ +E  +  G+ V  + 
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEEC-RALGAEV--LV 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV----KSPLDLTEEEWNHIMKT 131
           V  DV+ +   ++    +A    GRID  VNN GV GAV    ++P++  E+    +++T
Sbjct: 61  VPTDVT-DADQVKALATQAASFGGRIDVWVNNVGV-GAVGRFEETPIEAHEQ----VIQT 114

Query: 132 NLTGSWLVSKYVCIRMRDAN-------QEGSVINISSIAATSRGQLPGGVAYASSKAGLN 184
           NL G           MRDA+       ++G  I I+ I+       P   AY++SK GL 
Sbjct: 115 NLIG----------YMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLR 164

Query: 185 AMTKCLSLELGVH-KIRVNSICPG 207
             ++ L  EL  H  I V  + P 
Sbjct: 165 GFSEALRGELADHPDIHVCDVYPA 188

Length = 330

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 79.4 bits (196), Expect = 1e-17
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 35/260 (13%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           ++ V+VTGA+ G+G    L LA  G +++  AR            +          A +L
Sbjct: 3   SRTVLVTGATKGIGLALSLRLANLGHQVIGIAR------------SAIDDFPGELFACDL 50

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSW 137
              A+      ++ +  E    +DA+VNN G+  A+  PL  +       +   N+  + 
Sbjct: 51  ---ADIEQTAATLAQINEIHP-VDAIVNNVGI--ALPQPLGKIDLAALQDVYDLNVRAAV 104

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            V++     M+   Q G ++NI S A           +Y+++K+ L   T+  +LEL  +
Sbjct: 105 QVTQAFLEGMKLREQ-GRIVNICSRAIFG---ALDRTSYSAAKSALVGCTRTWALELAEY 160

Query: 198 KIRVNSICPGLFKSEITE------GLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
            I VN++ PG  ++E+           +K  L ++     P+R  GT +  + + + +L+
Sbjct: 161 GITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI-----PMRRLGTPE-EVAAAIAFLL 214

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            D + +++G +  VD G +L
Sbjct: 215 SDDAGFITGQVLGVDGGGSL 234

Length = 234

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 79.7 bits (197), Expect = 1e-17
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 29/257 (11%)

Query: 20  KVVMVTGAS--SGLGREFCLDLAKAGCRIVA-------AARRVDRLKS----LCDEINKQ 66
           K+ +VTGAS  +G+G   C  LA  G  I                       L +EI   
Sbjct: 6   KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI--- 62

Query: 67  SGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEW 125
               VR   +E+D+S   A          E  G    L+NNA  S    + L+ LT E+ 
Sbjct: 63  ESYGVRCEHMEIDLSQPYAP-NRVFYAVSERLGDPSILINNAAYST--HTRLEELTAEQL 119

Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
           +     N+  + L+S     +  D    G +IN++S    S G +P  +AYA++K  + A
Sbjct: 120 DKHYAVNVRATMLLSSAF-AKQYDGKAGGRIINLTS--GQSLGPMPDELAYAATKGAIEA 176

Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS 245
            TK L+ EL    I VN++ PG   +    G + ++  +++  + +P    G    A   
Sbjct: 177 FTKSLAPELAEKGITVNAVNPGPTDT----GWITEELKHHLVPK-FPQGRVGEPVDA-AR 230

Query: 246 LVRYLVHDSSEYVSGNI 262
           L+ +LV + +++++G +
Sbjct: 231 LIAFLVSEEAKWITGQV 247

Length = 256

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 79.3 bits (196), Expect = 1e-17
 Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 9/182 (4%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V  V GA  GLG       A  G  +  AARR  +L++L  +I + +G    A AV  D 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGG--SAKAVPTDA 58

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWLV 139
             +   +        E  G ++ LV NAG    V  P L+ T   +  + +    G +L 
Sbjct: 59  R-DEDEVIALFDLIEEEIGPLEVLVYNAG--ANVWFPILETTPRVFEKVWEMAAFGGFLA 115

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++    RM  A   G++I   + A+  RG+  G  A+A +K  L A+ + ++ ELG   I
Sbjct: 116 AREAAKRML-ARGRGTIIFTGATASL-RGR-AGFAAFAGAKFALRALAQSMARELGPKGI 172

Query: 200 RV 201
            V
Sbjct: 173 HV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 79.3 bits (196), Expect = 2e-17
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 16/195 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V ++TG  SGLGR         G ++    R  +++  L        G +V  + V
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELR----ADFGDAV--VGV 55

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV----SGAVKSPLDLTEEEWNHIMKTN 132
           E DV +  A  E +V +  E FG++D  + NAG+    +  V  P +  +E ++ +   N
Sbjct: 56  EGDVRSL-ADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHIN 114

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           + G  L +K     +     EGSVI   S A    G   GG  Y +SK  +  + K L+ 
Sbjct: 115 VKGYILGAKAALPAL--YATEGSVIFTVSNAGFYPGG--GGPLYTASKHAVVGLVKQLAY 170

Query: 193 ELGVHKIRVNSICPG 207
           EL  H IRVN + PG
Sbjct: 171 ELAPH-IRVNGVAPG 184

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 78.9 bits (195), Expect = 4e-17
 Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 24/212 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
               KV ++TGA+SG G  F    A  G ++V A  + D L     E+  Q       + 
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ---GAEVLG 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DVS + A +E     A E FG +  L NNAGV GA     + +  +W  ++  NL G
Sbjct: 60  VRTDVS-DAAQVEALADAALERFGAVHLLFNNAGV-GAGGLVWENSLADWEWVLGVNLWG 117

Query: 136 SWLVSKYVCI---RM-----RDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNA 185
              V   V      M     +D   EG ++N +S+A    G L  P    Y  SK  + +
Sbjct: 118 ---VIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA----GLLAPPAMGIYNVSKHAVVS 170

Query: 186 MTKCL--SLELGVHKIRVNSICPGLFKSEITE 215
           +T+ L   L L   ++  + +CP    + I +
Sbjct: 171 LTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ 202

Length = 287

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 78.3 bits (193), Expect = 7e-17
 Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 8/190 (4%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D +  +V GASSG+G    ++LA AG  +   ARRV++ + L D+I    G    A+A  
Sbjct: 9   DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGE---AVAFP 65

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
           LDV+ +  ++++ V +A EA G I+ LV+ AG         +++ E++   ++ +L G+ 
Sbjct: 66  LDVT-DPDSVKSFVAQAEEALGEIEVLVSGAG-DTYFGKLHEISTEQFESQVQIHLVGAN 123

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            ++  V   M    + G +I + S  A    Q P   AY ++KAGL AM   L +EL   
Sbjct: 124 RLATAVLPGMI-ERRRGDLIFVGSDVA--LRQRPHMGAYGAAKAGLEAMVTNLQMELEGT 180

Query: 198 KIRVNSICPG 207
            +R + + PG
Sbjct: 181 GVRASIVHPG 190

Length = 274

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 16/195 (8%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVEL 78
           + V++TG S GLG      L + G  +++ +R  +  L  L +    Q  S++   +++L
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----QYNSNLTFHSLDL 57

Query: 79  ----DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
               ++  N   I +S+Q+  +    I  L+NNAG+   +K       EE    +  NL 
Sbjct: 58  QDVHELETNFNEILSSIQE--DNVSSI-HLINNAGMVAPIKPIEKAESEELITNVHLNLL 114

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE- 193
              +++       +D   +  VINISS AA  +    G  AY SSKAGL+  T+ ++ E 
Sbjct: 115 APMILTSTFMKHTKDWKVDKRVINISSGAA--KNPYFGWSAYCSSKAGLDMFTQTVATEQ 172

Query: 194 -LGVHKIRVNSICPG 207
               + +++ +  PG
Sbjct: 173 EEEEYPVKIVAFSPG 187

Length = 251

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 77.2 bits (190), Expect = 1e-16
 Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 32/270 (11%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V+VT +S G+G     +L K G R+V ++R  + L+    E+ +         AV+ D+S
Sbjct: 3   VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGE----VYAVKADLS 58

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWN-----HIMKTNLTG 135
                ++N V++AWE  G IDALV NAG        L +    +W      H++      
Sbjct: 59  DK-DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLT 117

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           + L+  ++  +M+     G ++ +SS   + +  +P  V    ++AGL  + K +S   G
Sbjct: 118 TLLIQAWLEKKMK-----GVLVYLSS--VSVKEPMPPLVLADVTRAGLVQLAKGVSRTYG 170

Query: 196 VHKIRVNSICPGLFKS--------EITE--GL-MKKDWLNNVASRTYPLRDFGTTDPALT 244
              IR  ++  G F +         I E  G+  ++ W   V  RT PL+  G  +  L 
Sbjct: 171 GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT-PLKRTGRWE-ELG 228

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
           SL+ +L+ +++EY+ G+  + D GA   G+
Sbjct: 229 SLIAFLLSENAEYMLGSTIVFD-GAMTRGV 257

Length = 259

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 77.6 bits (191), Expect = 2e-16
 Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%)

Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA 82
           +VTG + G+G+ F   LA+ G  +V  AR  D+LK + D I  +     +   V +D S 
Sbjct: 57  LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVVDFSG 115

Query: 83  NGAAIENSVQKAWEAFGRIDA--LVNNAGVS-GAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           +   I+  V++  E    +D   L+NN GVS    +   ++ EE   +++K N+ G+  V
Sbjct: 116 D---IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKV 172

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++ V   M    ++G++INI S AA      P    YA++KA ++  ++CL +E     I
Sbjct: 173 TQAVLPGMLK-RKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGI 231

Query: 200 RVNSICP 206
            V    P
Sbjct: 232 DVQCQVP 238

Length = 320

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 75.8 bits (187), Expect = 5e-16
 Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 27/216 (12%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKQSGSSVRAM 74
           K V++TG  SG G      L   G  ++A     +      L+ +C         S R  
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVC---------SDRLR 51

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRID--ALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
            ++LDV+     I+ + Q   E  G      LVNNAG+ G       L  +++   M+ N
Sbjct: 52  TLQLDVT-KPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVN 110

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L G+  V+K     +R A  +G V+N+SS+    R   P G AY +SKA + A +  L  
Sbjct: 111 LFGTVEVTKAFLPLLRRA--KGRVVNVSSMGG--RVPFPAGGAYCASKAAVEAFSDSLRR 166

Query: 193 ELGVHKIRVNSICPGLFKSEIT------EGLMKKDW 222
           EL    ++V+ I PG FK+ IT      E   KK W
Sbjct: 167 ELQPWGVKVSIIEPGNFKTGITGNSELWEKQAKKLW 202

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 75.6 bits (186), Expect = 6e-16
 Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 18/205 (8%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K V++TGA++G+G+E   +LA+ G R++ A R + + +    EI + + +    +   LD
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNH-EVIVRHLD 60

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           + A+  +I     +      R+D L+NNAGV   ++ P   TE+ +      N  G +L+
Sbjct: 61  L-ASLKSIRAFAAEFLAEEDRLDVLINNAGV---MRCPYSKTEDGFEMQFGVNHLGHFLL 116

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLP-----------GGVAYASSKAGLNAMTK 188
           +  + + +   +    ++N+SS+A    G++             G AY  SK      T+
Sbjct: 117 T-NLLLDLLKKSAPSRIVNVSSLAHK-AGKINFDDLNSEKSYNTGFAYCQSKLANVLFTR 174

Query: 189 CLSLELGVHKIRVNSICPGLFKSEI 213
            L+  L    + VN++ PG+ ++E+
Sbjct: 175 ELARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 74.6 bits (184), Expect = 8e-16
 Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 14/248 (5%)

Query: 26  GASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGA 85
              + +        A+ G  +V             DE+ K+  + V    + LDV+ +  
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADV----IPLDVT-SDE 57

Query: 86  AIENSVQKAWEAFGRIDALVNNAGVSGAV---KSPLDLTEEEWNHIMKTNLTGSWLVSKY 142
            I+   +K  E  G+ID LV++  +S  +   K  LD + E +   +  +      ++K 
Sbjct: 58  DIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKA 117

Query: 143 VCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVN 202
               M   N+ GS++ +S IAA      PG      +KA L ++ + L+ ELG   IRVN
Sbjct: 118 AKPLM---NEGGSIVALSYIAA--ERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVN 172

Query: 203 SICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNI 262
           +I  G  K+    G+   D +   A    PL    + +    +   +L+ D +  ++G I
Sbjct: 173 TISAGPTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAA-FLLSDLARGITGQI 231

Query: 263 FIVDSGAT 270
             VD G +
Sbjct: 232 LYVDGGFS 239

Length = 239

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 75.6 bits (187), Expect = 1e-15
 Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 37/211 (17%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA----AARRVDRLKSLCDEINKQSGSSVR 72
           L  KV +VTGA+ G+G      LA+ G  +V     AA   + L ++ + +    G+   
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVG---GT--- 259

Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
             A+ LD++A  A      +   E  G +D +V+NAG++   K+  ++ E  W+ ++  N
Sbjct: 260 --ALALDITAPDAP-ARIAEHLAERHGGLDIVVHNAGITRD-KTLANMDEARWDSVLAVN 315

Query: 133 LTGSWLVSKYVCIRMRDA-------NQEGSVINISSIA--ATSRGQLPGGVAYASSKAGL 183
           L           +R+ +A          G ++ +SSI+  A +RGQ      YA+SKAG+
Sbjct: 316 LLAP--------LRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ----TNYAASKAGV 363

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEIT 214
             + + L+  L    I +N++ PG  ++++T
Sbjct: 364 IGLVQALAPLLAERGITINAVAPGFIETQMT 394

Length = 450

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 73.8 bits (181), Expect = 2e-15
 Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 29/271 (10%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINK-QSGSSVRAMAVEL 78
             +VTGA+  +G    + L + G R+V    R      +L  E+N  +  S+V   A   
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL---DLTEEEWN----HIMKT 131
           + +   +  E  +   + AFGR D LVNNA  S    +PL   D  E   +     +   
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNA--SAFYPTPLLRGDAGEGVGDKKSLEVQVA 120

Query: 132 NLTGSWLVSKYVCIRMRDANQEG----------SVINISSIAATSRGQLPGGVAYASSKA 181
            L GS  ++ Y  I+     Q G          S++N+    A +   L G   Y  +K 
Sbjct: 121 ELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL--CDAMTDQPLLGFTMYTMAKH 178

Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASRTYPLRDFGTTD 240
            L  +T+  +LEL   +IRVN + PGL          +++D+      R  PL     + 
Sbjct: 179 ALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDY-----RRKVPLGQREASA 233

Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
             +  +V +LV   ++Y++G    VD G +L
Sbjct: 234 EQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 72.7 bits (178), Expect = 4e-15
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 8/194 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +K ++VTGAS GLG +     A AG  ++  AR   +L+ + D I +       A+  
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 77  ELDVSANGAAIEN-SVQKAWEAFGRIDALVNNAGVSGAVKSPLDL-TEEEWNHIMKTNLT 134
           +L +SA     E  +   A    G++D +V+ AG   A+ SPLD  T  EW +  + N  
Sbjct: 64  DL-MSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTV 121

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
               +++     +   + + SVI +      +     GG  + +SKA LN + K  + E 
Sbjct: 122 APMGLTR-ALFPLLKQSPDASVIFVGESHGETPKAYWGG--FGASKAALNYLCKVAADEW 178

Query: 195 GVH-KIRVNSICPG 207
                +R N + PG
Sbjct: 179 ERFGNLRANVLVPG 192

Length = 239

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 8e-15
 Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 10/190 (5%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +  +VTGA+  +GR   LDLA  G  + V   R  D  ++L  EI        RA+A++ 
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGR---RAVALQA 66

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           D+ A+ A +   V +A  A G I  LVNNA +     S    T   W+  M TNL   ++
Sbjct: 67  DL-ADEAEVRALVARASAALGPITLLVNNASLFEY-DSAASFTRASWDRHMATNLRAPFV 124

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           +++    R   A+  G V+N+  I        P  ++Y  SKA L   T+ L+  L   +
Sbjct: 125 LAQAFA-RALPADARGLVVNM--IDQRVWNLNPDFLSYTLSKAALWTATRTLAQALA-PR 180

Query: 199 IRVNSICPGL 208
           IRVN+I PG 
Sbjct: 181 IRVNAIGPGP 190

Length = 258

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 72.0 bits (177), Expect = 8e-15
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 39/209 (18%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR---VDRLKSLCDEINKQSGSSVRAMAV 76
           K V++TG SSG+G E  L+L + G R++AA R+   V R+ SL                +
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFT------------GI 50

Query: 77  ELDVSANGAAIENSVQKAWEAF-----GRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMK 130
            LD+         SV++A +        R+  L NNAG    V  PL  ++ ++      
Sbjct: 51  LLDLDD-----PESVERAADEVIALTDNRLYGLFNNAGF--GVYGPLSTISRQQMEQQFS 103

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISS----IAATSRGQLPGGVAYASSKAGLNAM 186
           TN  G+  ++  +   M   + EG ++  SS    I+   RG      AYA+SK  L A 
Sbjct: 104 TNFFGTHQLTMLLLPAML-PHGEGRIVMTSSVMGLISTPGRG------AYAASKYALEAW 156

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITE 215
           +  L +EL    I+V+ I PG  ++  T+
Sbjct: 157 SDALRMELRHSGIKVSLIEPGPIRTRFTD 185

Length = 256

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 13/197 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLK----SLCDEINKQSGS 69
           L  K + +TGAS G+G+   L  A+ G  +V AA+  +   +L     +  +EI    G 
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGG- 59

Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
             +A+   +D+  +   +  +V+KA E FG ID LVNNA    ++   LD   + ++ +M
Sbjct: 60  --KALPCIVDIR-DEDQVRAAVEKAVEKFGGIDILVNNASAI-SLTGTLDTPMKRYDLMM 115

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
             N  G++L SK  C+     ++   ++N+S     +        AY  +K G++     
Sbjct: 116 GVNTRGTYLCSK-ACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLG 174

Query: 190 LSLELGVHKIRVNSICP 206
           ++ E     I VN++ P
Sbjct: 175 MAEEFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 13/199 (6%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K + +TGA+SG+GRE  L  A+ G  +       D L +L  E+  ++  +       LD
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGA-----LD 55

Query: 80  VSANGAAIENSVQKAWEAFG-RIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSW 137
           V+ + AA   ++     A G R+DAL NNAGV      P  D+     + ++  N+ G  
Sbjct: 56  VT-DRAAWAAALADFAAATGGRLDALFNNAGVGRG--GPFEDVPLAAHDRMVDINVKGV- 111

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L   Y  +    A     VIN +S +A   GQ P    Y+++K  +  +T+ L +E   H
Sbjct: 112 LNGAYAALPYLKATPGARVINTASSSAIY-GQ-PDLAVYSATKFAVRGLTEALDVEWARH 169

Query: 198 KIRVNSICPGLFKSEITEG 216
            IRV  + P    + I   
Sbjct: 170 GIRVADVWPWFVDTPILTK 188

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 67.2 bits (165), Expect = 2e-13
 Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 32/189 (16%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           ++V GA+  +G      L+  G  ++ A R               SG        ++D++
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGR--------------SSG------DYQVDIT 40

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK 141
                 E S++  +E  G  DA+V+ AG         +LT+ ++   + + L G   + +
Sbjct: 41  D-----EASIKALFEKVGHFDAIVSTAGD-AEFAPLAELTDADFQRGLNSKLLGQINLVR 94

Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRV 201
           +    + D    GS+   S I A  +  +PGG A A+    L    +  ++EL    IR+
Sbjct: 95  HGLPYLNDG---GSITLTSGILA--QRPIPGGAAAATVNGALEGFVRAAAIEL-PRGIRI 148

Query: 202 NSICPGLFK 210
           N++ PG+ +
Sbjct: 149 NAVSPGVVE 157

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 33/218 (15%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
             + +++TG SSG+G      L   G R+ A  R+ + + +L  E     G      A +
Sbjct: 3   MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-----GLE----AFQ 53

Query: 78  LDVSANGAAIENSVQKAWE-AFGRIDALVNNA--GVSGAVKSPLDLTEEEWNHIMKTNLT 134
           LD +    +I   V +  E + GR+DAL NN   G  GAV+   DL  E      + N  
Sbjct: 54  LDYA-EPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVE---DLPTEALRAQFEANFF 109

Query: 135 GSW--LVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYASSKAGLNAMTK 188
           G W  L  + + + MR    +G ++  SSI        RG      AY +SK  +  ++ 
Sbjct: 110 G-WHDLTRRVIPV-MR-KQGQGRIVQCSSILGLVPMKYRG------AYNASKFAIEGLSL 160

Query: 189 CLSLELGVHKIRVNSICPGLFKSEIT-EGLMK-KDWLN 224
            L +EL    I V+ I PG  ++      L   K W++
Sbjct: 161 TLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWID 198

Length = 277

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 43/214 (20%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K + +TGA+SG+GR   L  A  G R+ A       L +L  E+     +   A    LD
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-AGNAWTGA----LD 56

Query: 80  VSANGAAIENSVQKAWEAF-----GRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTN 132
           V+   A        A   F     GR+D L NNAG+   G  +   D+  E  + ++  N
Sbjct: 57  VTDRAA-----WDAALADFAAATGGRLDVLFNNAGILRGGPFE---DIPLEAHDRVIDIN 108

Query: 133 LTG---------SWLVSKYVCIRMRDANQEGS-VINISSIAATSRGQLPGGVAYASSKAG 182
           + G          +L         +     G+ VIN SS +A   GQ PG   Y+++K  
Sbjct: 109 VKGVLNGAHAALPYL---------KATP--GARVINTSSASAIY-GQ-PGLAVYSATKFA 155

Query: 183 LNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG 216
           +  +T+ L LE   H IRV  + P    + + +G
Sbjct: 156 VRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG 189

Length = 260

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 23/192 (11%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIV---AAARRVDRLKSLCDEINKQSGSSVRAMA 75
            K V+V G S G+G          G  +    A +      K   + + +++G++    A
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS------KDAAERLAQETGAT----A 55

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ D SA+  A+ + V+K+    G +D LV NAG+       L+L  ++ + + K N+  
Sbjct: 56  VQTD-SADRDAVIDVVRKS----GALDILVVNAGI-AVFGDALELDADDIDRLFKINIHA 109

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +  S     +M +    G +I I S+    R  + G  AYA+SK+ L  M + L+ + G
Sbjct: 110 PYHASVEAARQMPEG---GRIIIIGSVNG-DRMPVAGMAAYAASKSALQGMARGLARDFG 165

Query: 196 VHKIRVNSICPG 207
              I +N + PG
Sbjct: 166 PRGITINVVQPG 177

Length = 237

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 64.9 bits (158), Expect = 1e-12
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 22/178 (12%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
            ++ GA+ G+GR     LA  G R++ + R    L  L  E        V A+A   DV+
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAE--------VGALARPADVA 52

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWLVS 140
           A     E  V    +  G +D LV  AG    +  PL       W  I+  NLTG+ LV 
Sbjct: 53  A-----ELEVWALAQELGPLDLLVYAAG--AILGKPLARTKPAAWRRILDANLTGAALVL 105

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL-GVH 197
           K+    +        ++ +   A      LPG  AYA++KA L A  +    E+ G+ 
Sbjct: 106 KHALALLA---AGARLVFLG--AYPELVMLPGLSAYAAAKAALEAYVEVARKEVRGLR 158

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 34/270 (12%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRVDRLKSLCDEINKQSGSS 70
            L  KVV++ G +  LG     DLA  G + VA     AA + D  +++     K +G  
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAV--KAAG-- 60

Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIM 129
            +A+A + D++   AA+E     A  AFGR D  +N  G    +K P ++++E E++ + 
Sbjct: 61  AKAVAFQADLT-TAAAVEKLFDDAKAAFGRPDIAINTVG--KVLKKPIVEISEAEYDEMF 117

Query: 130 KTNLTGSWLVSKYVCIRMRDA----NQEGSVINI--SSIAATSRGQLPGGVAYASSKAGL 183
             N       SK     +++A    N  G ++ +  S + A +    P   AYA SKA +
Sbjct: 118 AVN-------SKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----PFYSAYAGSKAPV 166

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL--NNVASRTYPLRDFGTTDP 241
              T+  S E G   I V ++ PG   +         + +  +  A+   P    G TD 
Sbjct: 167 EHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDI 226

Query: 242 A-LTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
             +   +R+LV D   +++G   +++ G T
Sbjct: 227 EDIVPFIRFLVTDGW-WITGQTILINGGYT 255

Length = 257

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 64.1 bits (156), Expect = 4e-12
 Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 13/187 (6%)

Query: 88  ENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT-GSWLVSKYVCIR 146
           E  V    +A G ID LV+N  +     +P+D T E         L+   + + +    +
Sbjct: 60  EELVDAVLQAGGAIDVLVSNDYIP-RPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQ 118

Query: 147 MRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICP 206
           M+     GS+I I+S  A  +  L     Y  ++A   A+ + L+ EL    I V +I P
Sbjct: 119 MK-KAGGGSIIFITS--AVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGP 175

Query: 207 GLFKSEITEGLMKKDWLNNVASRTY-----PLRDFGTTDPALTSLVRYLVHDSSEYVSGN 261
             F S         DW NN   R       PL   G  D  + +LV +L    ++ ++G 
Sbjct: 176 NFFNSP--TYFPTSDWENNPELRERVKRDVPLGRLGRPD-EMGALVAFLASRRADPITGQ 232

Query: 262 IFIVDSG 268
            F    G
Sbjct: 233 FFAFAGG 239

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 10/204 (4%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K +++ GA+S + R      A AG R+  AAR V+RL+ L D++  +   +V     ELD
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVS--THELD 59

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           +    A+    +         +   V   G   A ++   L         +TN  G   +
Sbjct: 60  ILDT-ASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALAL----REFRTNFEGPIAL 114

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
              +  R  +A   G+++ ISS+A   RG+      Y S+KA L A    L   L    +
Sbjct: 115 LTLLANRF-EARGSGTIVGISSVAG-DRGR-ASNYVYGSAKAALTAFLSGLRNRLFKSGV 171

Query: 200 RVNSICPGLFKSEITEGLMKKDWL 223
            V ++ PG  ++ +T GL     L
Sbjct: 172 HVLTVKPGFVRTPMTAGLKLPGPL 195

Length = 243

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 28/253 (11%)

Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA 82
           +V G SSG+G       A  G R+  A+R  DRL +    +    G+ VR  A  LD++ 
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL--GGGAPVRTAA--LDITD 56

Query: 83  NGAAIENSVQKAWEAFGRIDALVNNA--GVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
             A     V   +   G  D +V  A     G V++ L L   +    M +   G++ V+
Sbjct: 57  EAA-----VDAFFAEAGPFDHVVITAADTPGGPVRA-LPLAAAQ--AAMDSKFWGAYRVA 108

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
           +    R+      GS+  +S  AA        GV   +  A L A+ + L+LEL    +R
Sbjct: 109 R--AARIAPG---GSLTFVSGFAAVRPS--ASGVLQGAINAALEALARGLALELA--PVR 159

Query: 201 VNSICPGLFKSEITEGLM--KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYV 258
           VN++ PGL  + +   L    ++ +   A+   P R  G  +  + + + +L   ++ + 
Sbjct: 160 VNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPED-VANAILFLA--ANGFT 216

Query: 259 SGNIFIVDSGATL 271
           +G+  +VD G  +
Sbjct: 217 TGSTVLVDGGHAI 229

Length = 230

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 63.1 bits (153), Expect = 1e-11
 Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 24/264 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV-----AAARRVDRLKSLCDEINKQSGSS 70
           +L ++  +VTG  SG+GR   +  A+ G  +              +K + +E  +     
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGR----- 100

Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            +A+ +  D+S +     + V +A +A G +D +   AG   A+    DLT E++     
Sbjct: 101 -KAVLLPGDLS-DEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFA 158

Query: 131 TNLTG-SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
            N+    WL  + + +  + A    S+I  SSI A      P  + YA++KA +   ++ 
Sbjct: 159 INVFALFWLTQEAIPLLPKGA----SIITTSSIQAYQPS--PHLLDYAATKAAILNYSRG 212

Query: 190 LSLELGVHKIRVNSICPG-LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLV 247
           L+ ++    IRVN + PG ++ +    G   +D +     +T P++  G   PA L  + 
Sbjct: 213 LAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQT-PMKRAG--QPAELAPVY 269

Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            YL    S YV+  +  V  G  L
Sbjct: 270 VYLASQESSYVTAEVHGVCGGEHL 293

Length = 294

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 40/194 (20%), Positives = 79/194 (40%), Gaps = 28/194 (14%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           +++TG +SG+G        + G  ++   R  +RL     E        +     ++   
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-----PEIHTEVCDV--- 59

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGV------SGAVKSPLDLTEEEWNHIMKTNLTG 135
           A+  +    V+   + +  ++ L+NNAG+      +GA     D  +E     + TNL  
Sbjct: 60  ADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE-----IATNLLA 114

Query: 136 S-WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA--YASSKAGLNAMTKCLSL 192
              L +  +   +R    E ++IN+SS        +P      Y ++KA +++ T  L  
Sbjct: 115 PIRLTALLLPHLLR--QPEATIINVSS----GLAFVPMASTPVYCATKAAIHSYTLALRE 168

Query: 193 ELGVHKIRVNSICP 206
           +L    + V  + P
Sbjct: 169 QLKDTSVEVIELAP 182

Length = 245

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 12/96 (12%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQS-GSSVRAMAVEL 78
           +V +VTGA++GLG E    LA  G  +V A R +D+ K+    I   + G+ V     EL
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ--EL 74

Query: 79  DVSANGAAIENSVQKAWEAFG----RIDALVNNAGV 110
           D+++       SV+ A +A      RID L+NNAGV
Sbjct: 75  DLTSLA-----SVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 42/128 (32%), Positives = 56/128 (43%), Gaps = 19/128 (14%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTG  SGLG E    LA+AG  ++  ARR D  +     I+   G  V    V
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID---GVEV----V 76

Query: 77  ELDVSANGAAIENSVQKAWEAFG----RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
            LD++        SV+   E F     RID L+NNAGV   +  P     + W     TN
Sbjct: 77  MLDLADLE-----SVRAFAERFLDSGRRIDILINNAGV---MACPETRVGDGWEAQFATN 128

Query: 133 LTGSWLVS 140
             G + + 
Sbjct: 129 HLGHFALV 136

Length = 315

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 25/192 (13%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +VV+V G    LG          G  + +    +D         N+++ +S+  +  +  
Sbjct: 2   RVVLVYGGRGALGSAVVQAFKSRGWWVAS----IDL------AENEEADASIIVLDSDSF 51

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
                   +  V       G++DAL+  AG    G+ KS   +  + W+ + K NL  S+
Sbjct: 52  T----EQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFV--KNWDLMWKQNLWTSF 105

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV- 196
           + S      +      G ++   + AA      PG + Y ++KA ++ +T+ L+ E    
Sbjct: 106 IASHLATKHLLSG---GLLVLTGAKAALEPT--PGMIGYGAAKAAVHQLTQSLAAENSGL 160

Query: 197 -HKIRVNSICPG 207
                 N+I P 
Sbjct: 161 PAGSTANAILPV 172

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 13/186 (6%)

Query: 24  VTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL-DVSA 82
           VTG S GLG      L + G  ++  AR           +   +G  +  + ++L D +A
Sbjct: 6   VTGHSRGLGAALAEQLLQPGIAVLGVARSRH------PSLAAAAGERLAEVELDLSDAAA 59

Query: 83  NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSWLVSK 141
             A +   +  A+        L+NNAG    +  PL  L        +  N+    +++ 
Sbjct: 60  AAAWLAGDLLAAFVDGASRVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTA 118

Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRV 201
            +  +      E  +++ISS AA  R    G   Y ++KA L+   + ++L+     +R+
Sbjct: 119 AL-AQAASDAAERRILHISSGAA--RNAYAGWSVYCATKAALDHHARAVALD-ANRALRI 174

Query: 202 NSICPG 207
            S+ PG
Sbjct: 175 VSLAPG 180

Length = 243

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 15/196 (7%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            +  ++ GAS GLG      L + G ++ A  R   +  +L      Q+   V    +++
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL------QALPGVHIEKLDM 54

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSW 137
           +   + A+++  +Q+      R D L  NAG+SG A +S  D T  E   +  TN     
Sbjct: 55  N---DPASLDQLLQRLQGQ--RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPI 109

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA-YASSKAGLNAMTKCLSLELGV 196
            +++ +  ++R     G +  +SS   +      G +  Y +SKA LN+MT+    ELG 
Sbjct: 110 RLARRLLGQVRPGQ--GVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGE 167

Query: 197 HKIRVNSICPGLFKSE 212
             + V S+ PG  K++
Sbjct: 168 PTLTVLSMHPGWVKTD 183

Length = 225

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 59/261 (22%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
            K ++++G + G+G+    + A++G  I       V+    + +++ ++ G  ++A A  
Sbjct: 8   GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG--IKAKAYP 65

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSG-AVKSP----LDLTEEEWNHIMKTN 132
           L++       E   +K  E F R+D  ++NA +SG AV       + L  +  N+I    
Sbjct: 66  LNILEPETYKE-LFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTAT 124

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL---PGGVAYASSKAGLNAMTKC 189
           +    + ++    RM      GS+I++SS      G L        + +SKA +  M K 
Sbjct: 125 VNAFVVGAQEAAKRMEKVGG-GSIISLSST-----GNLVYIENYAGHGTSKAAVETMVKY 178

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
            + ELG   IRVN++  G   ++  +     + +        PL   G  +  L     +
Sbjct: 179 AATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPED-LAGACLF 237

Query: 250 LVHDSSEYVSGNIFIVDSGAT 270
           L  + + +++G   +VD G T
Sbjct: 238 LCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 54/248 (21%)

Query: 20  KVVMVTGASSGLGREFC-----LDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           KVV+VTGA+SGLG   C      D       ++ A R + R ++ C  +      +    
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 75  AVE-LDVSANGAAIENSVQKAWEAFGRIDALVNNAGV--------SGAVKSPL------- 118
               +D+S N  ++  + ++  + + R+D L  NAG+         GA+K  L       
Sbjct: 62  DYVLVDLS-NMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAV 120

Query: 119 -----------------DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS 161
                              TE+    + +TN+ G + + + +   +  ++    +I  SS
Sbjct: 121 TNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSS 180

Query: 162 IAAT-----------SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK 210
           + A+            +G  P    Y+SSK  ++ ++  L+ +     +    + PG+  
Sbjct: 181 LNASPKYFSLEDIQHLKGPAP----YSSSKYLVDLLSLALNRKFNKLGVYSYVVHPGICT 236

Query: 211 SEITEGLM 218
           + +T G++
Sbjct: 237 TNLTYGIL 244

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 4e-10
 Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 26/181 (14%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K V++ GAS G+GREF       G R++A AR         D     +  ++ A A+ LD
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATAR---------DAAALAALQALGAEALALD 52

Query: 80  VSANGAAIENSVQKAWEAFG-RIDALVNNAGV----SGAVKSPLDLTEEEWNHIMKTNLT 134
           V+   +        AW+  G  +DA V  AGV    +  V+     T E+++ +M TN+ 
Sbjct: 53  VADPASV----AGLAWKLDGEALDAAVYVAGVYGPRTEGVEPI---TREDFDAVMHTNVL 105

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG--GVAYASSKAGLNAMTKCLSL 192
           G   +   +   +  A   G V+ + S    S G   G  G  Y +SKA LN   +  SL
Sbjct: 106 GPMQLLPILLPLVEAA---GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASL 162

Query: 193 E 193
           +
Sbjct: 163 Q 163

Length = 222

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 58.0 bits (140), Expect = 6e-10
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 13/204 (6%)

Query: 21  VVMVTGASSGLGREFCLDLAKA----GCRIVAAARRVDRLKSLCDEI-NKQSGSSVRAMA 75
           V +VTGAS G GR    +LAK     G  +V +AR  + L+ L  EI  ++SG  V  ++
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 76  VELDVSANGAAIENSVQKA--WEAFGRIDALVNNAGVSGAV-KSPLDLTEEEW-NHIMKT 131
           ++L   A    +  ++++    +   R+  L+NNAG  G V K  +DL++     +    
Sbjct: 62  LDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLGDVSKGFVDLSDSTQVQNYWAL 120

Query: 132 NLTGSWLVSKYVCIRMRDA-NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           NLT    ++  V    +D+     +V+NISS+ A       G   Y + KA  + + + L
Sbjct: 121 NLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ--PFKGWALYCAGKAARDMLFQVL 178

Query: 191 SLELGVHKIRVNSICPGLFKSEIT 214
           +LE     +RV +  PG+  +++ 
Sbjct: 179 ALEEKNPNVRVLNYAPGVLDTDMQ 202

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 56.0 bits (136), Expect = 1e-09
 Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 20/173 (11%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV---DRLKSLCDEINKQSGSSVRAMA 75
              ++TG   GLGR     LA+ G R +V  +R         +L  E+ + +G+ V  +A
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAEL-EAAGARVTVVA 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV A+  A+   +       G +  +++ AGV         LT E +  ++     G
Sbjct: 60  C--DV-ADRDALAAVLAAIPAVEGPLTGVIHAAGVLDD-GVLASLTPERFAAVLAPKAAG 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNAM 186
           +W + +       D       +  SSIA    S GQ      YA++ A L+A+
Sbjct: 116 AWNLHELTADLPLDF-----FVLFSSIAGVLGSPGQ----ANYAAANAFLDAL 159

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 55.1 bits (133), Expect = 7e-09
 Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 49/243 (20%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA 113
           + LK   + I ++ GS       ELDVS      ++  +   +  G+ID +V++  V+ A
Sbjct: 41  EALKKRVEPIAQELGSD---YVYELDVS-KPEHFKSLAESLKKDLGKIDFIVHS--VAFA 94

Query: 114 VKSPL-----DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIA 163
            K  L     + ++E +N  M+         S Y  I +  A     N   SV+ +S + 
Sbjct: 95  PKEALEGSFLETSKEAFNIAMEI--------SVYSLIELTRALLPLLNDGASVLTLSYL- 145

Query: 164 ATSRGQLPGGVAYAS-------SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG 216
                   GGV Y         +KA L +  + L+++LG   IRVN+I  G  K+    G
Sbjct: 146 --------GGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG 197

Query: 217 L----MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP 272
           +    M   W N + +   PL+   + +    S + YL+ D S  V+G I  VD+G  + 
Sbjct: 198 IGDFRMILKW-NEINA---PLKKNVSIEEVGNSGM-YLLSDLSSGVTGEIHYVDAGYNIM 252

Query: 273 GLP 275
           G+ 
Sbjct: 253 GMG 255

Length = 274

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 59/275 (21%), Positives = 102/275 (37%), Gaps = 58/275 (21%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
            +++TGA+SG+G      L  AG  ++    R   +    D    +     RA A+  DV
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVIGIDLREADVI--ADLSTPEG----RAAAIA-DV 53

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
            A  +             G +D LVN AGV G       L        +K N  G   + 
Sbjct: 54  LARCS-------------GVLDGLVNCAGVGGTT--VAGLV-------LKVNYFGLRALM 91

Query: 141 KYVCIRMRDANQEGSVINISSIAATS-------------------------RGQLPGGVA 175
           + +  R+R  +   + + +SSIA                                PG +A
Sbjct: 92  EALLPRLRKGHG-PAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLA 150

Query: 176 YASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR 234
           YA SK  L   T+  +        +RVN++ PG  ++ I +    +D     +   +   
Sbjct: 151 YAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAF-LQDPRGGESVDAFVTP 209

Query: 235 DFGTTDPA-LTSLVRYLVHDSSEYVSGNIFIVDSG 268
                +P  +  ++ +L  D++ +++G    VD G
Sbjct: 210 MGRRAEPDEIAPVIAFLASDAASWINGANLFVDGG 244

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 28/237 (11%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCR---IVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            VV++TG SSG+G    + LA    +   + A  R + +   L +     +G ++  +  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETL-- 58

Query: 77  ELDVSANGAAIENSVQKAWEAF--GRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNL 133
           +LDV         SV  A E      +D LV NAGV   +  PL+ L+E+    +   N+
Sbjct: 59  QLDVCD-----SKSVAAAVERVTERHVDVLVCNAGV--GLLGPLEALSEDAMASVFDVNV 111

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G+  + +     M+     G ++  SS+       LP    Y +SK  L  + + L+++
Sbjct: 112 FGTVRMLQAFLPDMK-RRGSGRILVTSSVGGLQ--GLPFNDVYCASKFALEGLCESLAVQ 168

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           L    + ++ I  G   +   E ++                   T D   T    Y 
Sbjct: 169 LLPFNVHLSLIECGPVHTAFMEKVLGSP----------EEVLDRTADDITTFHFFYQ 215

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 5/111 (4%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRV--DRLKSLCDEINKQSGSSVRAM 74
              V +VTG + G+GR     LA+  G R+V   R       +     +        R +
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVL 263

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW 125
            +  DV+ + AA+   ++K  E +G ID +++ AGV          T E++
Sbjct: 264 YISADVT-DAAAVRRLLEKVRERYGAIDGVIHAAGV-LRDALLAQKTAEDF 312

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 52.1 bits (126), Expect = 3e-08
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV---DRLKSLCDEINKQSGSSVRAMAV 76
             +VTG   GLG E    LA+ G R +V  +R        ++L  E+ +  G       V
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAEL-EARG--AEVTVV 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             DVS +  A+   + +       +  +++ AGV     + L ++T E++  ++   +TG
Sbjct: 59  ACDVS-DRDAVRALLAEIRADGPPLRGVIHAAGVLR--DALLANMTAEDFARVLAPKVTG 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNA 185
           +W + +    R R  +     +  SSIA    S GQ      YA++ A L+A
Sbjct: 116 AWNLHE--ATRDRPLDF---FVLFSSIAGVLGSPGQ----ANYAAANAFLDA 158

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 51.9 bits (124), Expect = 8e-08
 Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 19/196 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              +  ++TG +SG+G     + A+ G R+V     VD+   L   +N           V
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLG--DVDK-PGLRQAVNHLRAEGFDVHGV 60

Query: 77  ELDVSANGAAIENSVQKAWEAF---GRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTN 132
             DV       E     A EAF   G +D + +NAG+   V  P+ ++T ++W  ++  +
Sbjct: 61  MCDVR----HREEVTHLADEAFRLLGHVDVVFSNAGI--VVGGPIVEMTHDDWRWVIDVD 114

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP--GGVAYASSKAGLNAMTKCL 190
           L GS    +    R+ +    G V+  +S A    G +P  G  AY  +K G+  + + L
Sbjct: 115 LWGSIHTVEAFLPRLLEQGTGGHVVFTASFA----GLVPNAGLGAYGVAKYGVVGLAETL 170

Query: 191 SLELGVHKIRVNSICP 206
           + E+    I V+ +CP
Sbjct: 171 AREVTADGIGVSVLCP 186

Length = 275

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 7/105 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAM 74
            L  K  +VTG+S G+G +    LA AG  +V   R +  R   +  EI    G   RA 
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGG---RAS 59

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD 119
           AV  D+  +  ++   +  A E FG +DALV NA  SG ++S +D
Sbjct: 60  AVGADL-TDEESVAALMDTAREEFGGLDALVLNA--SGGMESGMD 101

Length = 248

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 40/253 (15%)

Query: 39  LAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF 98
           LA+ G  + A   + +RL+   +E+ ++ GS    + +  DV+ N  +I+       + +
Sbjct: 28  LAEQGAEL-AFTYQGERLEKRVEELAEELGS---DLVLPCDVT-NDESIDALFATIKKKW 82

Query: 99  GRIDALVNNAGVS---GAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA----- 150
           G++D LV++   +         LD + E +   M         +S Y    +  A     
Sbjct: 83  GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMD--------ISAYSFTALAKAARPLM 134

Query: 151 NQEGSVINISSIAATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICP 206
           N  GS++ ++ + +     +P     GVA    KA L A  + L+ +LG   IRVN+I  
Sbjct: 135 NNGGSILTLTYLGSER--VVPNYNVMGVA----KAALEASVRYLAADLGKEGIRVNAISA 188

Query: 207 G----LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNI 262
           G    L  S I +    +  L    +   PLR   T +    +   +L+ D S  ++G I
Sbjct: 189 GPIRTLAASGIGDF---RKMLKENEANA-PLRRNVTIEEVGNTAA-FLLSDLSSGITGEI 243

Query: 263 FIVDSGATLPGLP 275
             VDSG  + G+ 
Sbjct: 244 IYVDSGYHIMGMG 256

Length = 259

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 22/176 (12%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
             +   ++TG   GLG      LA  G R +V  +RR             ++    RA  
Sbjct: 148 GLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPA-----PRAAARAALL-RAGG 201

Query: 76  VELDVSANGAAIENSVQKAWEAFGR---IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
             + V         ++            +  +++ AGV        +LT   +  ++   
Sbjct: 202 ARVSVVRCDVTDPAALAALLAELAAGGPLAGVIHAAGVLRDA-LLAELTPAAFAAVLAAK 260

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNAM 186
           + G+      +     D   +  V+  SS+AA     GQ     AYA++ A L+A+
Sbjct: 261 VAGALN----LHELTPDLPLDFFVL-FSSVAALLGGAGQ----AAYAAANAFLDAL 307

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 48.7 bits (117), Expect = 9e-07
 Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 47/271 (17%)

Query: 20  KVVMVTGASS--GLGREFCLDLAKAGCRIV---AAARRVDRLKSLCDEINKQSGSSVRAM 74
           K +++TG ++   +       L +AG  +           R++ L + + +       A+
Sbjct: 2   KRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGES------AL 55

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVN---NAGVSGAVKSPLDLTEEEWNHIMKT 131
            +  DVS N   I+    +  + +G++D LV+    A         LD + + +   +  
Sbjct: 56  VLPCDVS-NDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALD- 113

Query: 132 NLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPG----GVAYASSKAG 182
                  +S Y  + +  A     N  GS++ +S + +     +PG    GVA    KA 
Sbjct: 114 -------ISAYSLVSLAKAALPIMNPGGSIVTLSYLGS--ERVVPGYNVMGVA----KAA 160

Query: 183 LNAMTKCLSLELGVHKIRVNSICPGLFK----SEITEGLMKKDWLNNVASRTYPLRDFGT 238
           L +  + L+ ELG   IRVN+I  G  K    S IT      ++    A    PL    T
Sbjct: 161 LESSVRYLAYELGRKGIRVNAISAGPIKTLAASGITGFDKMLEYSEQRA----PLGRNVT 216

Query: 239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGA 269
            +  + +   +L+ D S  ++G I  VD G 
Sbjct: 217 AEE-VGNTAAFLLSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 68/288 (23%), Positives = 116/288 (40%), Gaps = 59/288 (20%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
             +VV+V GA  G+G+     +  AG +++ A    + L++    +  ++G  V    V 
Sbjct: 1   MKEVVVVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR-EAGFDVSTQEV- 56

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DVS+   +++     A +  G +  LV+ AGVS +  SP          I+K +L G+ 
Sbjct: 57  -DVSSR-ESVKALAATA-QTLGPVTGLVHTAGVSPSQASPEA--------ILKVDLYGTA 105

Query: 138 LVSKYVCIRMRDANQEGSVINISS----------------IAATSRGQL-------PG-- 172
           LV +      +     G+ + I+S                +A T   +L       P   
Sbjct: 106 LVLEEF---GKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAI 162

Query: 173 ---GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR 229
                AY  +K          +++ G    R+NSI PG     I    + +D LN     
Sbjct: 163 EDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPG-----IISTPLAQDELNGPRGD 217

Query: 230 TY-------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
            Y       P    GT D  + +L  +L+     +++G+ F+VD GAT
Sbjct: 218 GYRNMFAKSPAGRPGTPD-EIAALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 48.4 bits (115), Expect = 1e-06
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 15/109 (13%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQ-SGSSVRAMAVEL 78
           KV+++TGA+SG+G E     A  G  ++ A R + R  +    I ++   + V AM ++L
Sbjct: 2   KVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDL 61

Query: 79  DVSANGAAIENSVQKAWEAFGR----IDALVNNAGVSGAVKSPLDLTEE 123
                  A   SVQ+  EAF      +  LV NA V      P  LTE+
Sbjct: 62  -------ASLRSVQRFAEAFKAKNSPLHVLVCNAAVFA---LPWTLTED 100

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 31/204 (15%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
              V++TGA+SG+G++  LD AK G +++A  R     +S+ DE++ QS +++  +A   
Sbjct: 1   MTAVLITGATSGIGKQLALDYAKQGWQVIACGRN----QSVLDELHTQS-ANIFTLA--F 53

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGV-----SGAVKSPLDLTEEEWNHIMKTNL 133
           DV+ +      +     +     +  + NAG       G V + L         +   N+
Sbjct: 54  DVTDH----PGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATL------MARVFNVNV 103

Query: 134 TGSWLVSKYVCIRMRDAN-QEG-SVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
            G   V+   CI     +   G  V+ + SIA  S   LP   AY +SKA +    + L 
Sbjct: 104 LG---VAN--CIEGIQPHLSCGHRVVIVGSIA--SELALPRAEAYGASKAAVAYFARTLQ 156

Query: 192 LELGVHKIRVNSICPGLFKSEITE 215
           L+L    I V ++ PG   + +T+
Sbjct: 157 LDLRPKGIEVVTVFPGFVATPLTD 180

Length = 240

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 33/237 (13%)

Query: 55  RLKSLCDEINKQSGSSVRAMAVELDV--SANGAAIENSVQKAWEAFGRIDALVNNAGVSG 112
           R+K L + +            +  DV   A+  A+  +++K W   G++D +V+  G S 
Sbjct: 48  RVKPLAESLGSD-------FVLPCDVEDIASVDAVFEALEKKW---GKLDFVVHAIGFSD 97

Query: 113 AVKSPL-----DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR 167
             K+ L     D T E ++  M  +      ++K     M D    GS++ ++   +T  
Sbjct: 98  --KNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG---GSMLTLTYGGSTR- 151

Query: 168 GQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL 223
             +P     GVA    KA L A  + L+ + G   IRVN+I  G  ++    G+     +
Sbjct: 152 -VMPNYNVMGVA----KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAI 206

Query: 224 NNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
            +   R  PLR   T D    S + YL+ D S  V+G I  VDSG  +  +P    L
Sbjct: 207 FSYQQRNSPLRRTVTIDEVGGSAL-YLLSDLSSGVTGEIHFVDSGYNIVSMPTLEEL 262

Length = 271

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 46.3 bits (111), Expect = 4e-06
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 88  ENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW-LV---SKYV 143
             S++  +E  G++DA+V+ AG         ++T+E++N  +++ L G   LV     Y+
Sbjct: 43  PASIRALFEKVGKVDAVVSAAG-KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYL 101

Query: 144 CIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNS 203
                  N  GS    S I   S   +PGG + A+    L    K  +LEL    IR+N 
Sbjct: 102 -------NDGGSFTLTSGIL--SDEPIPGGASAATVNGALEGFVKAAALELP-RGIRINV 151

Query: 204 ICPGLFK 210
           + P +  
Sbjct: 152 VSPTVLT 158

Length = 199

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 30/209 (14%)

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           VE DV A+  +IE +     E  G+ID +V+   ++ A K  L        ++  T+  G
Sbjct: 60  VECDV-ASDESIERAFATIKERVGKIDGIVH--AIAYAKKEELG------GNVTDTSRDG 110

Query: 136 SWL---VSKYVCIRMRDANQE-----GSVINISSIAATSRGQLPG----GVAYASSKAGL 183
             L   +S Y  I +    +       S++ ++   +     +P     G+A    KA L
Sbjct: 111 YALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER--AIPNYNVMGIA----KAAL 164

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPA 242
            +  + L+ +LG   IRVN+I  G  K+    G+   KD L    SRT  +   G T   
Sbjct: 165 ESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRT--VDGVGVTIEE 222

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           + +   +L+ D S  V+G+I  VD G  L
Sbjct: 223 VGNTAAFLLSDLSTGVTGDIIYVDKGVHL 251

Length = 252

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 17/180 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +  ++TGA+SG+G+   L +AK G  +    R   R +    EI  +SG+    + + +D
Sbjct: 2   RSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHI-VD 60

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           +S +   +   V++  E   ++  L+NNA   G + +  +LTE+       TN  G++++
Sbjct: 61  MS-DPKQVWEFVEEFKEEGKKLHVLINNA---GCMVNKRELTEDGLEKNFATNTLGTYIL 116

Query: 140 SKYVCIRMRDANQEGSVINISSIA-----------ATSRGQLPGGVAYASSKAGLNAMTK 188
           + ++ I + +  ++  VI +SS              + R    G + YA +K     MT+
Sbjct: 117 TTHL-IPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIMTE 175

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT 239
           KA L +  + L+ ELG   IRV++I PG  K+    G+   D L   A+   PLR     
Sbjct: 166 KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDI 225

Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           D  + ++  +L  D++  ++GN   +D G
Sbjct: 226 DD-VGAVAAFLASDAARRLTGNTLYIDGG 253

Length = 258

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 31/193 (16%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V+VTG  + LGR         G ++     R D L     E+           A ELDV 
Sbjct: 3   VLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-----EVA----------AKELDVD 47

Query: 82  ANGAAIEN--SVQKAWEAFGR-IDALVNNAGVSGAVKSP----LDLTEEEWNHIMKTNLT 134
           A      +  S+++A   F   +D +VN    S     P    L  T   W + +   + 
Sbjct: 48  AIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVL 107

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            + L  + V   +R     GS+I++           P G A A+ KA L+  T   +   
Sbjct: 108 SAVLTVQSVGDHLRSG---GSIISVVPENP------PAGSAEAAIKAALSNWTAGQAAVF 158

Query: 195 GVHKIRVNSICPG 207
           G   I +N++  G
Sbjct: 159 GTRGITINAVACG 171

Length = 223

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 37/230 (16%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA 113
           D LK   + +  + G+    +A   DV+ + A+I+   +   + +G++D +V+  G S  
Sbjct: 46  DALKKRVEPLAAELGAF---VAGHCDVT-DEASIDAVFETLEKKWGKLDFVVHAIGFSD- 100

Query: 114 VKSPL-----DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG 168
            K  L     D + + +   M  ++     V++     M D    GS++ ++   A    
Sbjct: 101 -KDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG---GSILTLTYYGAEK-- 154

Query: 169 QLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG------LM 218
            +P     GVA    KA L A  K L+++LG   IRVN+I  G  K+    G      ++
Sbjct: 155 VMPHYNVMGVA----KAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYIL 210

Query: 219 KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           K +  N    RT  + + G  D AL     YL+ D S  V+G +  VDSG
Sbjct: 211 KWNEYNAPLRRTVTIEEVG--DSAL-----YLLSDLSRGVTGEVHHVDSG 253

Length = 272

>gnl|CDD|235527 PRK05599, PRK05599, hypothetical protein; Provisional

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 7/196 (3%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           +++ G +S +  E    L   G  +V AARR +  + L  ++ ++  +SV  ++ +   +
Sbjct: 3   ILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFD---A 58

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK 141
            +       V++  E  G I   V   G+ G  +   +  E     I   + T    +  
Sbjct: 59  QDLDTHRELVKQTQELAGEISLAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLT 117

Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRV 201
            +   +R      +++  SSIA   R +    V Y S+KAGL+A  + L+  L    +R+
Sbjct: 118 VLADELRAQTAPAAIVAFSSIAGW-RARRANYV-YGSTKAGLDAFCQGLADSLHGSHVRL 175

Query: 202 NSICPGLFKSEITEGL 217
               PG     +T G+
Sbjct: 176 IIARPGFVIGSMTTGM 191

Length = 246

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 11/106 (10%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V++TGASSG+G      LAK G  ++ A R + + ++   E+     S      + +D+ 
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDS---YTIIHIDLG 65

Query: 82  ANGAAIENSVQKAWEAFGR-IDALVNNAGVSGAVKSPLDLTEEEWN 126
            +  ++   V   + A G+ +DALV NA    AV  PL L E   +
Sbjct: 66  -DLDSVRRFV-DDFRALGKPLDALVCNA----AVYMPL-LKEPLRS 104

Length = 322

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 13/100 (13%)

Query: 173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTY 231
           GVA    KA L A  K L+ +LG   IRVN+I  G  ++   +G+      L  +  R  
Sbjct: 162 GVA----KASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERA- 216

Query: 232 PLRDFGTTDP---ALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           PLR   TT       T+   +L  D S  V+G    VDSG
Sbjct: 217 PLRR--TTTQEEVGDTAA--FLFSDLSRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 42.3 bits (99), Expect = 6e-05
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 20/103 (19%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  KV +VTG   G+GR   L LAK G +++              +I+++SG +     
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVT------------DIDQESGQATVEEI 60

Query: 76  VELDVSANGAAIENSVQKAW--------EAFGRIDALVNNAGV 110
             L   A   + +   Q  W         AF RID L  NAG+
Sbjct: 61  TNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 39/187 (20%), Positives = 67/187 (35%), Gaps = 54/187 (28%)

Query: 22  VMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V+VTG S G+G      LA  G  +++  +RR                            
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVSRR---------------------------- 32

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
                                D +V+NA +       +DLT       ++ N+ G+  + 
Sbjct: 33  ---------------------DVVVHNAAI-LDDGRLIDLTGSRIERAIRANVVGTRRLL 70

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
           +     M+ A + G  I ISS+A       PG   YA+SKA L+ + +  + E   + + 
Sbjct: 71  EAARELMK-AKRLGRFILISSVA--GLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLP 127

Query: 201 VNSICPG 207
             ++  G
Sbjct: 128 ATAVACG 134

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 16/260 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K+   T +S G+G      LA+AG  ++  +R  + LK   ++I  +S   V  +  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L    +   +E +V K  +  G  D    + G        ++++ E+W   +K  L  +
Sbjct: 66  DLTKRED---LERTV-KELKNIGEPDIFFFSTG-GPKPGYFMEMSMEDWEGAVKLLLYPA 120

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +++ +   M +    G +I  +S+A   +  +P        +  +  + + L+ ELG 
Sbjct: 121 VYLTRALVPAM-ERKGFGRIIYSTSVAI--KEPIPNIALSNVVRISMAGLVRTLAKELGP 177

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA--------LTSLVR 248
             I VN I PG+ +++    L +        S    L+++    P         +  LV 
Sbjct: 178 KGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVA 237

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L  D   Y++G +  VD G
Sbjct: 238 FLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTGAS GLG      LA AG  ++   R   + ++    I + +    +    
Sbjct: 12  LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAI-RTAVPDAKLSLR 70

Query: 77  ELDVS--ANGAAIENSVQKAWEAFGR-IDALVNNAGV 110
            LD+S  A+ AA+   ++    A GR I  L+NNAGV
Sbjct: 71  ALDLSSLASVAALGEQLR----AEGRPIHLLINNAGV 103

Length = 313

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 11/114 (9%)

Query: 88  ENSVQKAWEAFGRIDALVNNAGV-----SGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKY 142
           E  +++  E F ++D L+N  G+      G  KS   L  + +   +  N   S L++K+
Sbjct: 55  EAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKH 114

Query: 143 VCIRM-RDANQEGSVIN--ISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
              ++ +  + + +VI+  + SI   S  +L G  +Y +SKA LN   K LS+E
Sbjct: 115 FTPKLKQSESAKFAVISAKVGSI---SDNRLGGWYSYRASKAALNMFLKTLSIE 165

Length = 235

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 35/255 (13%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKQSGSSVRAMAVE 77
           +++TGA   +G      L   G  ++ + R     +D L+        Q+G    A  ++
Sbjct: 5   ILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR--------QAG----AQCIQ 52

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            D S N A I   + +  +    + A+++NA      + P     +    +M+ ++   +
Sbjct: 53  ADFSTN-AGIMAFIDELKQHTDGLRAIIHNAS-DWLAEKPGAPLADVLARMMQIHVNAPY 110

Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           L++      +   +   +  +I+I+      +G     +AYA+SKA L+ MT   + +L 
Sbjct: 111 LLN-LALEDLLRGHGHAASDIIHITD-YVVEKGS-DKHIAYAASKAALDNMTLSFAAKLA 167

Query: 196 VHKIRVNSICPGL--FKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
              ++VNSI P L  F         +K  L     +  P  +       +  LV YL+  
Sbjct: 168 PE-VKVNSIAPALILFNEGDDAAYRQKA-LAKSLLKIEPGEE------EIIDLVDYLLT- 218

Query: 254 SSEYVSGNIFIVDSG 268
            S YV+G    VD G
Sbjct: 219 -SCYVTGRSLPVDGG 232

Length = 236

>gnl|CDD|181162 PRK07904, PRK07904, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 24/205 (11%)

Query: 22  VMVTGASSGLGREFCLD-LAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVE-L 78
           +++ G +S +G   C   L  A  R+V AA   D R  +   ++     SSV  +  + L
Sbjct: 11  ILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDAL 70

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNH------IMKTN 132
           D  ++   I+     A+   G +D  +   G+ G         EE W +      I + N
Sbjct: 71  DTDSHPKVID----AAFAG-GDVDVAIVAFGLLGD-------AEELWQNQRKAVQIAEIN 118

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
            T +  V   +  +MR A   G +I +SS  A  R +    V Y S+KAGL+     L  
Sbjct: 119 YTAAVSVGVLLGEKMR-AQGFGQIIAMSS-VAGERVRRSNFV-YGSTKAGLDGFYLGLGE 175

Query: 193 ELGVHKIRVNSICPGLFKSEITEGL 217
            L  + +RV  + PG  ++ ++   
Sbjct: 176 ALREYGVRVLVVRPGQVRTRMSAHA 200

Length = 253

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.0 bits (93), Expect = 6e-04
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 21/224 (9%)

Query: 55  RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV 114
           R+K L +EI     S       ELDV+ N  +I N      E +G  D L++  G++ A 
Sbjct: 49  RVKPLAEEIGCNFVS-------ELDVT-NPKSISNLFDDIKEKWGSFDFLLH--GMAFAD 98

Query: 115 KSPL-----DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ 169
           K+ L     D + E +++ +  +      +S+     M D    GS++ ++   A     
Sbjct: 99  KNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG---GSIVTLTYYGAEK--V 153

Query: 170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR 229
           +P       +KA L A  K L+ ++G + IRVN+I  G  K+  +  +     +    + 
Sbjct: 154 IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAA 213

Query: 230 TYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG 273
           T PL+   TT   +     YL  + S+ V+G I  VD G  + G
Sbjct: 214 TAPLKR-NTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIMG 256

Length = 260

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 13/91 (14%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
            VV V GA+  +GR     LAK G +++   R                G   + + VE D
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEA-----YARRLLVMGDLGQVLFVEFD 55

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGV 110
           +  +  +I  +++ +       D ++N  G 
Sbjct: 56  L-RDDESIRKALEGS-------DVVINLVGR 78

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 23/206 (11%)

Query: 87  IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIR 146
           ++   +     FG ID LV++      V  PL  T        +     +   S Y  + 
Sbjct: 107 VQEVAESVKADFGSIDILVHSLANGPEVTKPLLET-------SRKGYLAAISASSYSFVS 159

Query: 147 MRD-----ANQEGSVINISSIAATSRGQLPG-GVAYASSKAGLNAMTKCLSLELG-VHKI 199
           +        N  G+ I+++ IA  S   +PG G   +S+KA L + T+ L+ E G  +KI
Sbjct: 160 LLQHFGPIMNPGGASISLTYIA--SERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKI 217

Query: 200 RVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPALTSLVRYLVHDSSEYV 258
           RVN+I  G   S   + +   D +   +    PL ++    +    +   +L    +  +
Sbjct: 218 RVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAA--FLASPLASAI 275

Query: 259 SGNIFIVDSGATLPGL----PIFSSL 280
           +G    VD+G    GL    P    L
Sbjct: 276 TGATIYVDNGLNAMGLALDSPTLEDL 301

Length = 303

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 48/196 (24%), Positives = 72/196 (36%), Gaps = 39/196 (19%)

Query: 99  GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVIN 158
           GRIDAL N AGV G    P++L         + N  G   +++ +  RM      G+++N
Sbjct: 47  GRIDALFNIAGVPGTA--PVELV-------ARVNFLGLRHLTEALLPRMAPG---GAIVN 94

Query: 159 ISSIAA-------------TSRGQLPGGVA------------YASSKAGLNAMTKCLSLE 193
           ++S+A               +      G A            Y  SK  L   T   +  
Sbjct: 95  VASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQP 154

Query: 194 -LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
             G   IRVN + PG   + I            V S    +    T D     LV +L  
Sbjct: 155 WFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLV-FLCS 213

Query: 253 DSSEYVSGNIFIVDSG 268
           D++ +++G    VD G
Sbjct: 214 DAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 13/106 (12%)

Query: 173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPG----LFKSEITEGLMKKDWLNNVAS 228
           GVA    KA L A  + L+ ELG   IRVN+I  G    L  S +   L   D +++V  
Sbjct: 162 GVA----KAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGIL---DMIHHV-E 213

Query: 229 RTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
              PLR    T   + +   +L+ D +  ++G    VD+G  + G+
Sbjct: 214 EKAPLRR-TVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYCIMGM 258

Length = 258

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 28/207 (13%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            + + ++++T A S LGR      A+ G  ++   +    LK   ++ +     +V +  
Sbjct: 2   DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCS-ALTDNVYSFQ 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGR-IDALVNNAGVS--------GAVKSPLD-LTEEEW 125
           ++     +  +I +      + F R  D LVNN   S           +S +  L+    
Sbjct: 61  LK---DFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSS--- 114

Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
              + + L   +   +    RMR  N++G ++N+  I+      L G     SS A ++ 
Sbjct: 115 ---LASTL---FTYGQVAAERMRKRNKKGVIVNV--ISHDDHQDLTGVE---SSNALVSG 163

Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSE 212
            T   + EL    IRV  + P +F + 
Sbjct: 164 FTHSWAKELTPFNIRVGGVVPSIFSAN 190

Length = 227

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 29/264 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRI---VAAARRVDRLKSLCDEINKQSGSSVRA 73
           L  K ++VTG +S L   +   +A+A  R    +A   + D+LK   +E   Q GS +  
Sbjct: 4   LSGKRILVTGVASKLSIAY--GIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI-- 59

Query: 74  MAVELDVSANGA--AIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW-NHIMK 130
             +  DV+ + +  A+   + K W  F   D  V++ G +     P D  + ++ N + +
Sbjct: 60  -VLPCDVAEDASIDAMFAELGKVWPKF---DGFVHSIGFA-----PGDQLDGDYVNAVTR 110

Query: 131 TNLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
                +  +S Y  + M  A     N   +++ +S + A     +P       +KA L A
Sbjct: 111 EGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER--AIPNYNVMGLAKASLEA 168

Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALT 244
             + ++  +G   +RVN+I  G  ++    G+   +  L +  + T P+R   T +    
Sbjct: 169 NVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT-PIRRTVTIEDVGN 227

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSG 268
           S   +L  D S  +SG +  VD G
Sbjct: 228 S-AAFLCSDLSAGISGEVVHVDGG 250

Length = 262

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  K  +V G +  +G+   + LA+ G R+V   R ++R +   D +  + G  V A+ 
Sbjct: 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVE 84

Query: 76 VELDVSANGAAIE 88
             D +   AAI+
Sbjct: 85 TSDDAAR-AAAIK 96

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	99.98
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.88
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.87
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.85
PRK06720	169	hypothetical protein; Provisional	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN02572	442	UDP-sulfoquinovose synthase	99.81
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.8
PLN02650	351	dihydroflavonol-4-reductase	99.8
PLN02583	297	cinnamoyl-CoA reductase	99.79
PLN02240	352	UDP-glucose 4-epimerase	99.79
PLN02214	342	cinnamoyl-CoA reductase	99.79
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.77
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.77
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.77
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.77
PLN00198	338	anthocyanidin reductase; Provisional	99.77
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.75
PLN02686	367	cinnamoyl-CoA reductase	99.75
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.73
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.73
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.73
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.72
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.72
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.71
PLN02427	386	UDP-apiose/xylose synthase	99.69
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.68
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.68
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.67
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.67
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.65
PLN02260	668	probable rhamnose biosynthetic enzyme	99.64
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.64
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.63
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.62
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.6
PLN02206	442	UDP-glucuronate decarboxylase	99.6
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.59
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.58
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.57
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.57
CHL00194	317	ycf39 Ycf39; Provisional	99.57
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.57
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.54
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.5
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.5
PLN02996	491	fatty acyl-CoA reductase	99.46
PRK07201	657	short chain dehydrogenase; Provisional	99.45
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.43
PRK05865	854	hypothetical protein; Provisional	99.42
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.41
PLN02778	298	3,5-epimerase/4-reductase	99.35
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.34
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.33
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.3
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.28
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.24
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.21
PLN02503	605	fatty acyl-CoA reductase 2	99.2
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.19
PLN02260	668	probable rhamnose biosynthetic enzyme	99.14
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.13
PLN00016	378	RNA-binding protein; Provisional	99.13
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.12
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.09
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.99
PRK08309	177	short chain dehydrogenase; Provisional	98.99
PRK12320	699	hypothetical protein; Provisional	98.98
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.98
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.97
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.71
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.7
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.67
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.67
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.67
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.66
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.65
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.46
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.41
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.39
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.3
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.25
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.23
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.22
PLN00106	323	malate dehydrogenase	98.16
PRK14982	340	acyl-ACP reductase; Provisional	98.1
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.05
PRK09620	229	hypothetical protein; Provisional	98.05
PTZ00325	321	malate dehydrogenase; Provisional	97.99
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.99
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.95
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.93
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.83
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.78
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.78
COG2910	211	Putative NADH-flavin reductase [General function p	97.77
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.72
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.7
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.68
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.61
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.59
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.57
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.57
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.53
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.51
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.5
PRK06849	389	hypothetical protein; Provisional	97.44
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.44
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.44
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.43
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.42
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.41
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.34
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.29
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.29
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.27
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.26
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.19
PRK05086	312	malate dehydrogenase; Provisional	97.15
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.15
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.11
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.11
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.09
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.09
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.09
PLN02602	350	lactate dehydrogenase	97.09
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.07
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.07
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.06
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.05
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.04
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.03
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.01
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.95
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.95
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.91
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.9
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.9
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.88
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.87
KOG2774	366	consensus NAD dependent epimerase [General functio	96.87
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.84
PTZ00117	319	malate dehydrogenase; Provisional	96.83
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.83
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.82
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.81
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.78
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.76
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.76
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.73
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.72
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.72
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.71
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.71
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.7
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.69
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.69
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.67
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.66
PRK08223	287	hypothetical protein; Validated	96.66
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.64
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.63
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.63
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.62
PRK14968	188	putative methyltransferase; Provisional	96.61
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.6
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.56
PLN00203	519	glutamyl-tRNA reductase	96.52
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.52
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.5
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.49
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.47
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.45
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.44
PRK06223	307	malate dehydrogenase; Reviewed	96.42
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.42
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.41
COG3268	382	Uncharacterized conserved protein [Function unknow	96.4
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.39
PRK05442	326	malate dehydrogenase; Provisional	96.37
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.37
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.36
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.35
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.35
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.34
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.34
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.32
PRK09496	453	trkA potassium transporter peripheral membrane com	96.32
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.31
PRK08655	437	prephenate dehydrogenase; Provisional	96.28
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.28
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.27
PRK08328	231	hypothetical protein; Provisional	96.26
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.23
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.21
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.18
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.16
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.13
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.1
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.09
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.08
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.07
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.07
PRK04148	134	hypothetical protein; Provisional	96.02
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.94
PRK06932	314	glycerate dehydrogenase; Provisional	95.93
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.92
PRK07411	390	hypothetical protein; Validated	95.92
PRK12480	330	D-lactate dehydrogenase; Provisional	95.89
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.86
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.84
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.84
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.83
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.82
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.8
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.79
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.78
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.78
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.75
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.75
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.74
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.74
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.73
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.73
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.72
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.71
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.7
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.69
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.68
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.67
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.65
PLN02928	347	oxidoreductase family protein	95.64
PLN02740	381	Alcohol dehydrogenase-like	95.6
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.59
PLN02306	386	hydroxypyruvate reductase	95.58
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.58
PRK14851	679	hypothetical protein; Provisional	95.58
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.56
PRK06487	317	glycerate dehydrogenase; Provisional	95.55
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.54
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.54
PRK13243	333	glyoxylate reductase; Reviewed	95.5
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.47
PRK09496	453	trkA potassium transporter peripheral membrane com	95.45
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.43
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.41
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	95.39
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.38
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.38
PRK07574	385	formate dehydrogenase; Provisional	95.37
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.37
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.36
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.36
PLN03139	386	formate dehydrogenase; Provisional	95.36
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.34
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.3
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.27
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.25
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.25
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.24
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.24
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.18
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.13
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.08
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.05
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.04
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.02
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.02
PRK06436	303	glycerate dehydrogenase; Provisional	95.02
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.0
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.0
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.98
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	94.98
PRK14852	989	hypothetical protein; Provisional	94.97
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.93
PRK07877	722	hypothetical protein; Provisional	94.9
PTZ00354	334	alcohol dehydrogenase; Provisional	94.9

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=3.1e-50  Score=309.86  Aligned_cols=247  Identities=30%  Similarity=0.461  Sum_probs=219.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..+++.|.++||||++|||+++++.|+++|++|++.+++...+++....+...    ..-....||++ +.++++..+++
T Consensus         9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~----~~h~aF~~DVS-~a~~v~~~l~e   83 (256)
T KOG1200|consen    9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY----GDHSAFSCDVS-KAHDVQNTLEE   83 (256)
T ss_pred             HHHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC----CccceeeeccC-cHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988888887777432    24556799999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-NQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ..+.+|+++++|||||+. .+..+..+..++|+..+.+|+.|.|.++|++...|... +++.+|||+||+.+..  +.-+
T Consensus        84 ~~k~~g~psvlVncAGIt-rD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki--GN~G  160 (256)
T KOG1200|consen   84 MEKSLGTPSVLVNCAGIT-RDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI--GNFG  160 (256)
T ss_pred             HHHhcCCCcEEEEcCccc-cccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc--cccc
Confidence            999999999999999997 45677789999999999999999999999999986543 3355999999999987  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|+++|+++.+|+|+.|+|++++|||||.|.||++.|||++..++ +.+.++. ..+|++|++.+| |+|+.+.||+|
T Consensus       161 QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~-~v~~ki~-~~iPmgr~G~~E-evA~~V~fLAS  237 (256)
T KOG1200|consen  161 QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP-KVLDKIL-GMIPMGRLGEAE-EVANLVLFLAS  237 (256)
T ss_pred             chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH-HHHHHHH-ccCCccccCCHH-HHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999987543 3444444 448999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.++|+||+.+.|+||+.+
T Consensus       238 ~~ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  238 DASSYITGTTLEVTGGLAM  256 (256)
T ss_pred             cccccccceeEEEeccccC
Confidence            9999999999999999753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-48  Score=329.35  Aligned_cols=252  Identities=21%  Similarity=0.295  Sum_probs=211.0

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+.  . ..+.+|++ +.+++++++++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~--~-~~~~~Dv~-d~~~v~~~~~~   76 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS--D-YVYELDVS-KPEHFKSLAES   76 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC--c-eEEEecCC-CHHHHHHHHHH
Confidence            5789999999997  89999999999999999999999853 22233333332222  2 56899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|++|||||+...   ..++.+.+.++|++++++|+.+++.++++++|+|.+   .|+||++||..+..  +.
T Consensus        77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~--~~  151 (274)
T PRK08415         77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVK--YV  151 (274)
T ss_pred             HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCcc--CC
Confidence            99999999999999998532   256778899999999999999999999999999964   48999999988765  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|+.+|+++++.|++++||+||+|+||+++|++............+.....|++|..+|+ |+++++.||
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pe-dva~~v~fL  230 (274)
T PRK08415        152 PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIE-EVGNSGMYL  230 (274)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHH-HHHHHHHHH
Confidence            7888999999999999999999999999999999999999987543322111122222346899999998 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCCCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGLPIFS  278 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~~~~~  278 (280)
                      +++.+.++||+++.+|||+++.++|=.|
T Consensus       231 ~s~~~~~itG~~i~vdGG~~~~~~~~~~  258 (274)
T PRK08415        231 LSDLSSGVTGEIHYVDAGYNIMGMGAVE  258 (274)
T ss_pred             hhhhhhcccccEEEEcCcccccCCCccc
Confidence            9999999999999999999998888544

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-48  Score=329.87  Aligned_cols=250  Identities=23%  Similarity=0.307  Sum_probs=209.9

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|++|++|||||++  |||+++|++|+++|++|++++|+....+. .+++.+..+   ....+.+|++ +.+++++++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g---~~~~~~~Dv~-d~~~v~~~~~~   78 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLG---SDFVLPCDVE-DIASVDAVFEA   78 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcC---CceEEeCCCC-CHHHHHHHHHH
Confidence            47899999999996  99999999999999999999998643333 333332222   2346899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAV---KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|++|||||.....   .++.+.+.++|++.+++|+.+++.++|+++|+|.+   +|+||++||..+..  +.
T Consensus        79 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~--~~  153 (271)
T PRK06505         79 LEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTR--VM  153 (271)
T ss_pred             HHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccc--cC
Confidence            999999999999999975321   35668899999999999999999999999999963   48999999988765  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      |++..|++||+|+.+|+|+++.|++++|||||+|+||+++|++..................|++|+++|+ |+|+++.||
T Consensus       154 ~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-eva~~~~fL  232 (271)
T PRK06505        154 PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTID-EVGGSALYL  232 (271)
T ss_pred             CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999998643322222222333447999999998 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      +++.+.++||+++.+|||+++..+|-
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~~~~  258 (271)
T PRK06505        233 LSDLSSGVTGEIHFVDSGYNIVSMPT  258 (271)
T ss_pred             hCccccccCceEEeecCCcccCCcch
Confidence            99999999999999999998877653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.3e-47  Score=323.97  Aligned_cols=258  Identities=37%  Similarity=0.574  Sum_probs=219.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++.++.+|+++|||+++|||+++|++|++.|++|++++|+++.+++...++......+.++..+.||++ +.++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~l~~   80 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVS-KEVDVEKLVE   80 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCC-CHHHHHHHHH
Confidence            345799999999999999999999999999999999999999999999988776665668999999999 7899999999


Q ss_pred             HHHHH-cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhH-HHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           93 KAWEA-FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG-SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        93 ~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ...+. +|++|++|||||......+..+.+.|+|++.+++|+.| .+.+.+.+.+++.+ .++|.|+++||..+...  .
T Consensus        81 ~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~-~~gg~I~~~ss~~~~~~--~  157 (270)
T KOG0725|consen   81 FAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKK-SKGGSIVNISSVAGVGP--G  157 (270)
T ss_pred             HHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHh-cCCceEEEEeccccccC--C
Confidence            99988 79999999999998655578899999999999999996 55555655566654 45899999999888763  2


Q ss_pred             CCC-CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---hhhhhh--hhcCCCCCCCCCChHHHH
Q 023555          171 PGG-VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNV--ASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       171 ~~~-~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---~~~~~~--~~~~~p~~~~~~~~~~va  244 (280)
                      +.. ..|+++|+|+++|+|++|.||+++|||||+|+||.+.|++.......   .+..+.  .....|++|++.|+ |++
T Consensus       158 ~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~-eva  236 (270)
T KOG0725|consen  158 PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPE-EVA  236 (270)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHH-HHH
Confidence            333 79999999999999999999999999999999999999983222221   222222  33457999999999 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +.+.||++++++|+||+.|.+|||+++.+-.
T Consensus       237 ~~~~fla~~~asyitG~~i~vdgG~~~~~~~  267 (270)
T KOG0725|consen  237 EAAAFLASDDASYITGQTIIVDGGFTVVGPS  267 (270)
T ss_pred             HhHHhhcCcccccccCCEEEEeCCEEeeccc
Confidence            9999999998789999999999999987643

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-47  Score=325.31  Aligned_cols=249  Identities=22%  Similarity=0.356  Sum_probs=215.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..  +.++.++.+|++ +.++++++++++.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~-~~~~i~~~~~~~~   81 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES--NVDVSYIVADLT-KREDLERTVKELK   81 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEecCC-CHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999988888887776543  236778999999 7899999999985


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                       .+|++|++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+++..
T Consensus        82 -~~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~--~~~~~~~  156 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKE--PIPNIAL  156 (263)
T ss_pred             -hhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccC--CCCcchh
Confidence             5899999999999753 35677899999999999999999999999999998754 68999999988765  6678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |+++|+|+++|+++++.|++++|||||+|+||+++|++......         .+...+......|++|+..|+ |+|++
T Consensus       157 y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~  235 (263)
T PRK08339        157 SNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE-EIGYL  235 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHH-HHHHH
Confidence            99999999999999999999999999999999999998643211         011112233457999999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.||+++.+.++||+++.+|||+.++.
T Consensus       236 v~fL~s~~~~~itG~~~~vdgG~~~~~  262 (263)
T PRK08339        236 VAFLASDLGSYINGAMIPVDGGRLNSV  262 (263)
T ss_pred             HHHHhcchhcCccCceEEECCCccccC
Confidence            999999999999999999999998764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-47  Score=324.14  Aligned_cols=243  Identities=21%  Similarity=0.278  Sum_probs=208.1

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|++|+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++..     .++.++.+|++ +.+++++++++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~-----~~~~~~~~Dl~-~~~~v~~~~~~   76 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD-----EEDLLVECDVA-SDESIERAFAT   76 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc-----CceeEEeCCCC-CHHHHHHHHHH
Confidence            5789999999999  8999999999999999999999984 44433343321     25678899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|++|||||...+   ..++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +.
T Consensus        77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~--~~  151 (252)
T PRK06079         77 IKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSER--AI  151 (252)
T ss_pred             HHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccc--cC
Confidence            99999999999999998643   256778899999999999999999999999999953   48999999988765  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|+++|+++++.|++++||+||+|+||+++|++.......+...+......|++|+++|+ |+++++.||
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~l  230 (252)
T PRK06079        152 PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIE-EVGNTAAFL  230 (252)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999998654332222222233457999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.++++||+++.+|||+++
T Consensus       231 ~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        231 LSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             hCcccccccccEEEeCCceec
Confidence            999999999999999999875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-47  Score=322.13  Aligned_cols=248  Identities=23%  Similarity=0.298  Sum_probs=207.8

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++|+++||||++  |||+++|++|+++|++|++++|++ ..++..+++.+..+   ....+.+|++ +.+++++++++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g---~~~~~~~Dv~-~~~~v~~~~~~   79 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG---CNFVSELDVT-NPKSISNLFDD   79 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC---CceEEEccCC-CHHHHHHHHHH
Confidence            57899999999997  999999999999999999999874 33444455544322   1245789999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|++|||+|....   ..++.+.+.++|++.+++|+.+++.++++++|+|++   +|+||++||..+..  +.
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~--~~  154 (260)
T PRK06603         80 IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEK--VI  154 (260)
T ss_pred             HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCcccc--CC
Confidence            99999999999999997532   246678899999999999999999999999999953   48999999988765  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|+++|+++++.|++++||+||+|+||+++|++.......+..........|++|++.|+ |+|+++.||
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~L  233 (260)
T PRK06603        155 PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQE-DVGGAAVYL  233 (260)
T ss_pred             CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999998543221111112223347999999998 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      +++.+.++||+++.+|||+++.+-
T Consensus       234 ~s~~~~~itG~~i~vdgG~~~~~~  257 (260)
T PRK06603        234 FSELSKGVTGEIHYVDCGYNIMGS  257 (260)
T ss_pred             hCcccccCcceEEEeCCcccccCc
Confidence            999999999999999999988653

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-47  Score=320.14  Aligned_cols=251  Identities=32%  Similarity=0.504  Sum_probs=215.8

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +++++++|++|||||++|||+++++.|+++|++|++++|+.+++++..+++....   .++..+.+|++ +.++++++++
T Consensus         3 ~~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~-~~~~~~~~~~   78 (253)
T PRK05867          3 DLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG---GKVVPVCCDVS-QHQQVTSMLD   78 (253)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEccCC-CHHHHHHHHH
Confidence            4457899999999999999999999999999999999999988888887776532   36778899999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..+......++
T Consensus        79 ~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  157 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQ  157 (253)
T ss_pred             HHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCC
Confidence            9999999999999999986 345677889999999999999999999999999998765468999999987653211224


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|+++|+++++.+++++||+||+|+||+++|++.....  +.... .....|++++.+|+ |+|+++.||++
T Consensus       158 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~--~~~~~-~~~~~~~~r~~~p~-~va~~~~~L~s  233 (253)
T PRK05867        158 VSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT--EYQPL-WEPKIPLGRLGRPE-ELAGLYLYLAS  233 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch--HHHHH-HHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            5789999999999999999999999999999999999999875432  11222 23347899999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCC
Q 023555          253 DSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.++++||+++.+|||++++
T Consensus       234 ~~~~~~tG~~i~vdgG~~~~  253 (253)
T PRK05867        234 EASSYMTGSDIVIDGGYTCP  253 (253)
T ss_pred             cccCCcCCCeEEECCCccCc
Confidence            99999999999999998753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3.5e-47  Score=322.37  Aligned_cols=249  Identities=21%  Similarity=0.318  Sum_probs=210.5

Q ss_pred             CCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           15 CQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        15 ~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +++++|+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..   .+..++.+|++ +.++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~-d~~~v~~~   77 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL---NPSLFLPCDVQ-DDAQIEET   77 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc---CcceEeecCcC-CHHHHHHH
Confidence            46889999999986  89999999999999999999876543  3344455554332   24567899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      ++++.+.+|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.++|+++|+|++   .|+||++||..+.. 
T Consensus        78 ~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~-  153 (258)
T PRK07370         78 FETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVR-  153 (258)
T ss_pred             HHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccccc-
Confidence            99999999999999999997532   246778899999999999999999999999999964   48999999988765 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                       +.+++..|++||+|+.+|+++++.|++++||+||+|+||+++|++...... .+.. .......|++|+.+|+ |+++.
T Consensus       154 -~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~-~~~~~~~p~~r~~~~~-dva~~  230 (258)
T PRK07370        154 -AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMI-HHVEEKAPLRRTVTQT-EVGNT  230 (258)
T ss_pred             -CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhh-hhhhhcCCcCcCCCHH-HHHHH
Confidence             668889999999999999999999999999999999999999998653321 1222 2223347899999998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      +.||+++.+.++||+++.+|||+++.|+
T Consensus       231 ~~fl~s~~~~~~tG~~i~vdgg~~~~~~  258 (258)
T PRK07370        231 AAFLLSDLASGITGQTIYVDAGYCIMGM  258 (258)
T ss_pred             HHHHhChhhccccCcEEEECCcccccCC
Confidence            9999999999999999999999998775

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-47  Score=318.99  Aligned_cols=246  Identities=27%  Similarity=0.441  Sum_probs=210.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+..  ++..+++++.   +.++.++.+|++ +.++++++++++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~   77 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL---GRKFHFITADLI-QQKDIDSIVSQA   77 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc---CCeEEEEEeCCC-CHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998643  2333444332   236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.+|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..+..  +.++..
T Consensus        78 ~~~~g~iD~lv~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~  154 (251)
T PRK12481         78 VEVMGHIDILINNAGII-RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ--GGIRVP  154 (251)
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC--CCCCCc
Confidence            99999999999999986 345677889999999999999999999999999997754468999999988876  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.......+...+......|++++++|+ |+++++.||+++.
T Consensus       155 ~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-eva~~~~~L~s~~  233 (251)
T PRK12481        155 SYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPD-DLAGPAIFLSSSA  233 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998765432222222223347999999998 9999999999999


Q ss_pred             CCcccccEEEeCCccc
Q 023555          255 SEYVSGNIFIVDSGAT  270 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~  270 (280)
                      +.++||+++.+|||+.
T Consensus       234 ~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        234 SDYVTGYTLAVDGGWL  249 (251)
T ss_pred             ccCcCCceEEECCCEe
Confidence            9999999999999975

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-46  Score=319.76  Aligned_cols=249  Identities=19%  Similarity=0.246  Sum_probs=207.1

Q ss_pred             CCCCCcEEEEecC--CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~--~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++|++|||||  ++|||+++|++|+++|++|++++|++ +.++..+++....+   ....+.+|++ +.++++++++
T Consensus         2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~Dv~-~~~~v~~~~~   76 (261)
T PRK08690          2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD---SELVFRCDVA-SDDEINQVFA   76 (261)
T ss_pred             CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC---CceEEECCCC-CHHHHHHHHH
Confidence            4588999999997  67999999999999999999998864 33344444443322   2457899999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCC---CC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAV---KS-PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      .+.+++|++|++|||||+....   .+ +.+.+.++|++.+++|+.+++.++|+++|+|+++  +|+||++||..+..  
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~--  152 (261)
T PRK08690         77 DLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVR--  152 (261)
T ss_pred             HHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEccccccc--
Confidence            9999999999999999986321   12 3467889999999999999999999999999653  48999999988765  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +.|++..|++||+|+.+|+++++.|++++||+||+|+||+++|++...........+......|++|+.+|+ |+|+++.
T Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~  231 (261)
T PRK08690        153 AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIE-EVGNTAA  231 (261)
T ss_pred             CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHH-HHHHHHH
Confidence            568889999999999999999999999999999999999999998654432122222233447999999998 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ||+++.+.++||+++.+|||+.+.-
T Consensus       232 ~l~s~~~~~~tG~~i~vdgG~~~~~  256 (261)
T PRK08690        232 FLLSDLSSGITGEITYVDGGYSINA  256 (261)
T ss_pred             HHhCcccCCcceeEEEEcCCccccc
Confidence            9999999999999999999987643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=318.82  Aligned_cols=251  Identities=20%  Similarity=0.324  Sum_probs=209.2

Q ss_pred             CcccCCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      +-|.++++||++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+..+   ...++.+|++ +.++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~---~~~~~~~D~~-~~~~v~   76 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELD---APIFLPLDVR-EPGQLE   76 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhc---cceEEecCcC-CHHHHH
Confidence            345667899999999998  59999999999999999999999864322 2222322221   2457899999 789999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT  165 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~  165 (280)
                      ++++++.+.+|++|++|||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+.
T Consensus        77 ~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~  153 (258)
T PRK07533         77 AVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAE  153 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccc
Confidence            9999999999999999999997532   245678899999999999999999999999999953   5899999998776


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      .  +.+++..|++||+|+.+|+++++.|++++||+||+|+||+++|++...... ++...+. ....|++++.+|+ |++
T Consensus       154 ~--~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~p~~r~~~p~-dva  229 (258)
T PRK07533        154 K--VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDA-AERAPLRRLVDID-DVG  229 (258)
T ss_pred             c--CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHH-HhcCCcCCCCCHH-HHH
Confidence            5  567888999999999999999999999999999999999999998754322 2222223 3347999999998 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.+.||+++.+.++||+.+.+|||+++-|
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgg~~~~~  258 (258)
T PRK07533        230 AVAAFLASDAARRLTGNTLYIDGGYHIVG  258 (258)
T ss_pred             HHHHHHhChhhccccCcEEeeCCcccccC
Confidence            99999999999999999999999987643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-46  Score=316.83  Aligned_cols=252  Identities=19%  Similarity=0.278  Sum_probs=209.6

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++|++|||||++  |||+++|+.|+++|++|++++|+. ++++..+++....+   ....+.+|++ +.+++++++++
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~---~~~~~~~Dl~-~~~~v~~~~~~   77 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG---SDIVLPCDVA-EDASIDAMFAE   77 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccC---CceEeecCCC-CHHHHHHHHHH
Confidence            37899999999986  999999999999999999999973 44445555544322   3567889999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVK----SPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +.+.+|++|++|||||+.....    .+.+.+.++|++.+++|+.+++.+++++.|.|++   +|+||++||..+..  +
T Consensus        78 ~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~iss~~~~~--~  152 (262)
T PRK07984         78 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAER--A  152 (262)
T ss_pred             HHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---CcEEEEEecCCCCC--C
Confidence            9999999999999999753211    1456789999999999999999999999886642   48999999988765  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .+++..|++||+|+++|+|+++.|++++|||||+|+||+++|++..................|++++..|+ |+++.+.|
T Consensus       153 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~  231 (262)
T PRK07984        153 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAF  231 (262)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHH-HHHHHHHH
Confidence            67889999999999999999999999999999999999999987543222111112223347899999998 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLPIFS  278 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~~~~  278 (280)
                      |+++.+.+++|+++.+|||+++.-+.++|
T Consensus       232 L~s~~~~~itG~~i~vdgg~~~~~~~~~~  260 (262)
T PRK07984        232 LCSDLSAGISGEVVHVDGGFSIAAMNELE  260 (262)
T ss_pred             HcCcccccccCcEEEECCCccccccchhc
Confidence            99999999999999999999988887765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.5e-46  Score=318.39  Aligned_cols=249  Identities=23%  Similarity=0.319  Sum_probs=207.4

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|++|++|||||+  +|||+++|+.|+++|++|++++|++. ..+..+++.+..+   ....+.+|++ +.+++++++++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~---~~~~~~~Dl~-~~~~v~~~~~~   81 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG---AFVAGHCDVT-DEASIDAVFET   81 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC---CceEEecCCC-CHHHHHHHHHH
Confidence            5789999999997  89999999999999999999988742 2222333333222   2456899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..+..  +.
T Consensus        82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~--~~  156 (272)
T PRK08159         82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEK--VM  156 (272)
T ss_pred             HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEecccccc--CC
Confidence            99999999999999997632   246678899999999999999999999999999953   48999999987765  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      |++..|++||+|+.+|+++++.|++++||+||+|+||+++|++............+.....|++|+.+|+ |+|+++.||
T Consensus       157 p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~~~~L  235 (272)
T PRK08159        157 PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIE-EVGDSALYL  235 (272)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHH-HHHHHHHHH
Confidence            8889999999999999999999999999999999999999987643322111222223347999999998 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +++.+.++||++|.+|||+++.++.
T Consensus       236 ~s~~~~~itG~~i~vdgG~~~~~~~  260 (272)
T PRK08159        236 LSDLSRGVTGEVHHVDSGYHVVGMK  260 (272)
T ss_pred             hCccccCccceEEEECCCceeeccC
Confidence            9999999999999999999876553

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-46  Score=313.85  Aligned_cols=252  Identities=31%  Similarity=0.470  Sum_probs=218.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |+++++|+++||||++|||++++++|+++|++|++++|++++++++.+++.+..   .++.++.+|++ +.+++++++++
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~~   76 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG---GEAVALAGDVR-DEAYAKALVAL   76 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCC-CHHHHHHHHHH
Confidence            356889999999999999999999999999999999999998888888776532   36788999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|.|++.+ .++||++||..+.. .+.+++
T Consensus        77 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~-~~~~~~  154 (254)
T PRK07478         77 AVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHT-AGFPGM  154 (254)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhc-cCCCCc
Confidence            9999999999999999864445677889999999999999999999999999998754 68999999987652 145788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||+|++.|+++++.+++++||+||+|+||+++|++.+.....+....+.....|++++.+|+ |+++.+.||+++
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~  233 (254)
T PRK07478        155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPE-EIAQAALFLASD  233 (254)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998765432222233344456888999998 999999999999


Q ss_pred             CCCcccccEEEeCCcccCC
Q 023555          254 SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+.++||+++.+|||+++.
T Consensus       234 ~~~~~~G~~~~~dgg~~~~  252 (254)
T PRK07478        234 AASFVTGTALLVDGGVSIT  252 (254)
T ss_pred             hhcCCCCCeEEeCCchhcc
Confidence            9999999999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-46  Score=314.72  Aligned_cols=251  Identities=28%  Similarity=0.520  Sum_probs=216.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.. .+.++.++.+|++ +.++++++++++
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~-~~~~~~~~~~~~   80 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV-AGARVLAVPADVT-DAASVAAAVAAA   80 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEEccCC-CHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999988888888876531 2346888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+++.
T Consensus        81 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  156 (260)
T PRK07063         81 EEAFGPLDVLVNNAGIN-VFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFK--IIPGCF  156 (260)
T ss_pred             HHHhCCCcEEEECCCcC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhcc--CCCCch
Confidence            99999999999999975 334556788999999999999999999999999997644 68999999988766  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      .|++||+|+++|+++++.+++++||+||+|+||+++|++......    ............|++|+++|+ |+++.+.||
T Consensus       157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~va~~~~fl  235 (260)
T PRK07063        157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPE-EVAMTAVFL  235 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999998654321    111112223447899999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.+.++||+++.+|||+++.
T Consensus       236 ~s~~~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        236 ASDEAPFINATCITIDGGRSVL  257 (260)
T ss_pred             cCccccccCCcEEEECCCeeee
Confidence            9999999999999999998754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.4e-46  Score=314.82  Aligned_cols=246  Identities=20%  Similarity=0.267  Sum_probs=206.4

Q ss_pred             CCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecCh---hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           15 CQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRV---DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        15 ~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      +++++|+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++.     +.++..+.+|++ +.+++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~-d~~~v~~   76 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE-----GQESLLLPCDVT-SDEEITA   76 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC-----CCceEEEecCCC-CHHHHHH
Confidence            46889999999997  8999999999999999999998763   33444433331     236778899999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      +++++.+.+|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..+..
T Consensus        77 ~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~  153 (257)
T PRK08594         77 CFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGER  153 (257)
T ss_pred             HHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCcc
Confidence            999999999999999999997532   245678899999999999999999999999999954   58999999998866


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                        +.+.+..|++||+|+++|+++++.|++++||+||+|+||+++|++.......+..........|++|+.+|+ |+++.
T Consensus       154 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-~va~~  230 (257)
T PRK08594        154 --VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQE-EVGDT  230 (257)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHH-HHHHH
Confidence              567888999999999999999999999999999999999999997543211111111223346899999998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.||+++.++++||+++.+|||+++-
T Consensus       231 ~~~l~s~~~~~~tG~~~~~dgg~~~~  256 (257)
T PRK08594        231 AAFLFSDLSRGVTGENIHVDSGYHII  256 (257)
T ss_pred             HHHHcCcccccccceEEEECCchhcc
Confidence            99999999999999999999998764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=7.2e-46  Score=318.65  Aligned_cols=253  Identities=23%  Similarity=0.295  Sum_probs=208.3

Q ss_pred             CCCCcEEEEecC--CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhc-------CCC---cceEEEEecc--C
Q 023555           16 QLDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQS-------GSS---VRAMAVELDV--S   81 (280)
Q Consensus        16 ~l~~k~vlItG~--~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~D~--~   81 (280)
                      +|+||++|||||  ++|||+++|+.|++.|++|++ +|+.+.++++..++.+..       ..+   .....+.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            599999999999  899999999999999999999 788888887776664311       001   1134677787  3


Q ss_pred             C-----------------CHHHHHHHHHHHHHHcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHH
Q 023555           82 A-----------------NGAAIENSVQKAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYV  143 (280)
Q Consensus        82 ~-----------------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  143 (280)
                      +                 +.++++++++++.+.+|++|+||||||... ...++.+.+.++|++++++|+.+++.++|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            1                 134899999999999999999999998642 2367888999999999999999999999999


Q ss_pred             HHHHHhcCCCCeEEEEeccccccCCCCCCC-CCChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCccchh
Q 023555          144 CIRMRDANQEGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMKKD  221 (280)
Q Consensus       144 ~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~~~~~  221 (280)
                      +|.|++   .|+||++||..+..  +.|++ ..|++||+|+++|+++++.|+++ +|||||+|+||+++|++.......+
T Consensus       165 ~p~m~~---~G~II~isS~a~~~--~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~  239 (303)
T PLN02730        165 GPIMNP---GGASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFID  239 (303)
T ss_pred             HHHHhc---CCEEEEEechhhcC--CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccH
Confidence            999965   38999999988765  45655 47999999999999999999986 7999999999999999976432111


Q ss_pred             hhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          222 WLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       222 ~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      ...+......|++|+..|+ |+++.+.||+|+.+.++||+++.+|||+++.|+.
T Consensus       240 ~~~~~~~~~~pl~r~~~pe-evA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~  292 (303)
T PLN02730        240 DMIEYSYANAPLQKELTAD-EVGNAAAFLASPLASAITGATIYVDNGLNAMGLA  292 (303)
T ss_pred             HHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEEECCCccccccC
Confidence            1112222346889999998 9999999999999999999999999999998853

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-45  Score=312.79  Aligned_cols=246  Identities=20%  Similarity=0.255  Sum_probs=201.1

Q ss_pred             CCCCCcEEEEecC--CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~--~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++|++|||||  ++|||+++|++|+++|++|++++|..... +..+++.+..+   ....+.+|++ +.++++++++
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~Dv~-d~~~v~~~~~   76 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFG---SDLVFPCDVA-SDEQIDALFA   76 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH-HHHHHHHHhcC---CcceeeccCC-CHHHHHHHHH
Confidence            3578999999996  68999999999999999999987652222 22223322222   2246889999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCC---CC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAV---KS-PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++.+.+|++|++|||||.....   .+ +.+.+.++|++.+++|+.+++.++|+++|+|.+   .|+||++||..+..  
T Consensus        77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~~--  151 (260)
T PRK06997         77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAER--  151 (260)
T ss_pred             HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEecccccc--
Confidence            9999999999999999985321   12 346788999999999999999999999999943   48999999988765  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      +.+++..|++||+|+++|+++++.|++++||+||+|+||+++|++...... .+.... .....|++|.++|+ |+++++
T Consensus       152 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~-~~~~~p~~r~~~pe-dva~~~  229 (260)
T PRK06997        152 VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDF-VESNAPLRRNVTIE-EVGNVA  229 (260)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHH-HHhcCcccccCCHH-HHHHHH
Confidence            567888999999999999999999999999999999999999987543321 122222 23346899999998 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccCC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .||+++.+.++||++|.+|||+++.
T Consensus       230 ~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        230 AFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             HHHhCccccCcceeEEEEcCChhhc
Confidence            9999999999999999999998754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=8.5e-47  Score=316.91  Aligned_cols=234  Identities=35%  Similarity=0.607  Sum_probs=209.1

Q ss_pred             cCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc-CCcc
Q 023555           26 GAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF-GRID  102 (280)
Q Consensus        26 G~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g~id  102 (280)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+..+.  +  .+.+|++ +.++++++++++.+.+ |++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~--~--~~~~D~~-~~~~v~~~~~~~~~~~~g~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA--E--VIQCDLS-DEESVEALFDEAVERFGGRID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS--E--EEESCTT-SHHHHHHHHHHHHHHHCSSES
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC--c--eEeecCc-chHHHHHHHHHHHhhcCCCeE
Confidence            566  99999999999999999999999999987777888776653  2  4999999 7899999999999999 9999


Q ss_pred             EEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          103 ALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       103 ~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|||+|....   ..++.+.+.++|++.+++|+.+++.++|++.|+|++   .|+||++||..+..  +.+++..|+++
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~~~~~--~~~~~~~y~~s  150 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSIAAQR--PMPGYSAYSAS  150 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEGGGTS--BSTTTHHHHHH
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccchhhcc--cCccchhhHHH
Confidence            99999998744   367778899999999999999999999999998876   48999999998876  67888899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcc
Q 023555          180 KAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYV  258 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i  258 (280)
                      |+|+++|+|++|.||++ +|||||+|+||+++|++.......+...+......|++|+++|+ |+|+++.||+|+.+++|
T Consensus       151 Kaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~-evA~~v~fL~s~~a~~i  229 (241)
T PF13561_consen  151 KAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPE-EVANAVLFLASDAASYI  229 (241)
T ss_dssp             HHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHH-HHHHHHHHHHSGGGTTG
T ss_pred             HHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHH-HHHHHHHHHhCccccCc
Confidence            99999999999999999 99999999999999998765543444555555669999999999 99999999999999999


Q ss_pred             cccEEEeCCccc
Q 023555          259 SGNIFIVDSGAT  270 (280)
Q Consensus       259 ~G~~i~vdgG~~  270 (280)
                      |||+|.||||++
T Consensus       230 tG~~i~vDGG~s  241 (241)
T PF13561_consen  230 TGQVIPVDGGFS  241 (241)
T ss_dssp             TSEEEEESTTGG
T ss_pred             cCCeEEECCCcC
Confidence            999999999985

...

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-45  Score=309.05  Aligned_cols=251  Identities=27%  Similarity=0.444  Sum_probs=213.2

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .++++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++...   +.++..+.+|++ +.+++++++
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~i~~~~   77 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA---GRRAIQIAADVT-SKADLRAAV   77 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHH
Confidence            456899999999999999999999999999999999999754 456666666543   236778899999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+....+.+
T Consensus        78 ~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~  155 (254)
T PRK06114         78 ARTEAELGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGL  155 (254)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCC
Confidence            999999999999999999863 35677889999999999999999999999999997654 6899999998876532223


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      .+..|+++|+|++.++++++.|++++||+||+|+||+++|++.......+. .+......|++|+.+|+ |+++.+.||+
T Consensus       156 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~-~~~~~~~~p~~r~~~~~-dva~~~~~l~  233 (254)
T PRK06114        156 LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQ-TKLFEEQTPMQRMAKVD-EMVGPAVFLL  233 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHH-HHHHHhcCCCCCCcCHH-HHHHHHHHHc
Confidence            468999999999999999999999999999999999999998653111111 22233457999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccC
Q 023555          252 HDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++.++++||+++.+|||+++
T Consensus       234 s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        234 SDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             CccccCcCCceEEECcCEec
Confidence            99999999999999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-45  Score=310.55  Aligned_cols=252  Identities=21%  Similarity=0.390  Sum_probs=214.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.+|++|++|||||++|||+++|+.|+++|++|++++| +.+.++...+++....  +.++.++.+|++ +.++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~-~~~~~~~~~~   79 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY--GIKAKAYPLNIL-EPETYKELFK   79 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc--CCceEEEEcCCC-CHHHHHHHHH
Confidence            45789999999999999999999999999999998875 5666677666665432  236788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           93 KAWEAFGRIDALVNNAGVSGA-----VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      ++.+.++++|++|||||....     ..++.+.+.+++.+.+++|+.+++.++++++|.|++.+ .|+||++||..+.. 
T Consensus        80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-  157 (260)
T PRK08416         80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLV-  157 (260)
T ss_pred             HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccccc-
Confidence            999999999999999986421     24566788899999999999999999999999998644 68999999987765 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                       +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+...+......|++|+.+|+ |+++++
T Consensus       158 -~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-~va~~~  235 (260)
T PRK08416        158 -YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPE-DLAGAC  235 (260)
T ss_pred             -CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHH-HHHHHH
Confidence             567889999999999999999999999999999999999999998665433222223333447899999998 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccCC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .||+++.+.+++|+.+.+|||+++.
T Consensus       236 ~~l~~~~~~~~~G~~i~vdgg~~~~  260 (260)
T PRK08416        236 LFLCSEKASWLTGQTIVVDGGTTFK  260 (260)
T ss_pred             HHHcChhhhcccCcEEEEcCCeecC
Confidence            9999999999999999999998763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-45  Score=306.63  Aligned_cols=251  Identities=27%  Similarity=0.492  Sum_probs=219.3

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...   +.++..+.+|++ +.++++++++
T Consensus         3 ~~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~~~~~~~   78 (254)
T PRK08085          3 DLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE---GIKAHAAPFNVT-HKQEVEAAIE   78 (254)
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEecCCC-CHHHHHHHHH
Confidence            356789999999999999999999999999999999999988888887777543   236778899999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..  +.++
T Consensus        79 ~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  154 (254)
T PRK08085         79 HIEKDIGPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSEL--GRDT  154 (254)
T ss_pred             HHHHhcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhcc--CCCC
Confidence            9999999999999999975 445677889999999999999999999999999997644 68999999987765  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|+++|++++.++++++.+++++||+||+|+||+++|++.......+....+.....|++++++|+ |+++++.||++
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~~~~l~~  233 (254)
T PRK08085        155 ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQ-ELIGAAVFLSS  233 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            88999999999999999999999999999999999999998765433222333344557999999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCC
Q 023555          253 DSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.++++||+++.+|||++..
T Consensus       234 ~~~~~i~G~~i~~dgg~~~~  253 (254)
T PRK08085        234 KASDFVNGHLLFVDGGMLVA  253 (254)
T ss_pred             ccccCCcCCEEEECCCeeec
Confidence            99999999999999998753

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-44  Score=309.65  Aligned_cols=248  Identities=27%  Similarity=0.476  Sum_probs=213.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||+++++.|+++|++|++++|+ +.+++..+++.+.   +.++..+.+|++ +.++++++++++
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~   76 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN---GGKAKAYHVDIS-DEQQVKDFASEI   76 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc---CCeEEEEEeecC-CHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999 7777777777543   236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|.++  +|+||++||..+..  +.++..
T Consensus        77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~  152 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQA--ADLYRS  152 (272)
T ss_pred             HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcC--CCCCCc
Confidence            99999999999999986444567788999999999999999999999999999764  48999999988766  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---h---hhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---D---WLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---~---~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.......   .   .+........|++++.+|+ |+++.+.
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~  231 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPE-EVAKLVV  231 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHH-HHHHHHH
Confidence            9999999999999999999999999999999999999987543211   0   1111122346889999998 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ||+++.+.+++|+++.+|||+...
T Consensus       232 ~l~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        232 FLASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             HHcCchhcCcCCCEEEECCCcccC
Confidence            999999999999999999997643

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-44  Score=307.26  Aligned_cols=251  Identities=27%  Similarity=0.374  Sum_probs=217.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.++ ..++..+.+|++ +.++++++++++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~v~~~~~~~   81 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP-GARLLAARCDVL-DEADVAAFAAAV   81 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEecCC-CHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999888888887766543 246778999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++.+ .|+||++||..+..  +.+++.
T Consensus        82 ~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  157 (265)
T PRK07062         82 EARFGGVDMLVNNAGQG-RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQ--PEPHMV  157 (265)
T ss_pred             HHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccC--CCCCch
Confidence            99999999999999985 445677889999999999999999999999999998754 68999999988876  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhh-hhcCCCCCCCCCChHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNV-ASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~-~~~~~p~~~~~~~~~~va  244 (280)
                      .|+++|+|+.+|+++++.|++++||+||+|+||+++|++....+.         +.+.... .....|++|+.+|+ |++
T Consensus       158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-~va  236 (265)
T PRK07062        158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPD-EAA  236 (265)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHH-HHH
Confidence            999999999999999999999999999999999999998643211         1111111 12447999999999 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.||+++.+.++||+++.+|||+..+
T Consensus       237 ~~~~~L~s~~~~~~tG~~i~vdgg~~~~  264 (265)
T PRK07062        237 RALFFLASPLSSYTTGSHIDVSGGFARH  264 (265)
T ss_pred             HHHHHHhCchhcccccceEEEcCceEee
Confidence            9999999999999999999999998653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.2e-45  Score=307.82  Aligned_cols=245  Identities=22%  Similarity=0.258  Sum_probs=203.3

Q ss_pred             CCCCCcEEEEecC--CChhHHHHHHHHHHhCCeEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           15 CQLDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        15 ~~l~~k~vlItG~--~~giG~a~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++++|+++||||  ++|||+++|+.|+++|++|++++|+.  +.++++.+++.      .++.++.+|++ +.++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~-~~~~i~~~   75 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP------EPAPVLELDVT-NEEHLASL   75 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC------CCCcEEeCCCC-CHHHHHHH
Confidence            4588999999999  89999999999999999999999864  33444444331      14667899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAV---KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      ++++.+.+|++|++|||||+....   .++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++++.. .. 
T Consensus        76 ~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-~~-  150 (256)
T PRK07889         76 ADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-TV-  150 (256)
T ss_pred             HHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-cc-
Confidence            999999999999999999986321   35667889999999999999999999999999963   48999998753 22 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCC-CCCCChHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR-DFGTTDPALTSL  246 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~va~~  246 (280)
                       +.+.+..|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.....+...+......|++ ++.+|+ |+|+.
T Consensus       151 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~-evA~~  228 (256)
T PRK07889        151 -AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPT-PVARA  228 (256)
T ss_pred             -cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHH-HHHHH
Confidence             456778899999999999999999999999999999999999998654432122222223346887 588998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.||+++.+.++||+++.+|||++..|
T Consensus       229 v~~l~s~~~~~~tG~~i~vdgg~~~~~  255 (256)
T PRK07889        229 VVALLSDWFPATTGEIVHVDGGAHAMG  255 (256)
T ss_pred             HHHHhCcccccccceEEEEcCceeccC
Confidence            999999999999999999999988654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.1e-44  Score=303.51  Aligned_cols=249  Identities=27%  Similarity=0.447  Sum_probs=211.2

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.++++||++|||||++|||++++++|+++|++|++++++..  ++..+++.+.   +.++..+.+|++ +.++++++++
T Consensus         4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~   77 (253)
T PRK08993          4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL---GRRFLSLTADLR-KIDGIPALLE   77 (253)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHH
Confidence            345799999999999999999999999999999998887642  3333444332   236778999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..+..  +.++
T Consensus        78 ~~~~~~~~~D~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  154 (253)
T PRK08993         78 RAVAEFGHIDILVNNAGLI-RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ--GGIR  154 (253)
T ss_pred             HHHHHhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc--CCCC
Confidence            9999999999999999975 345677889999999999999999999999999997754468999999988776  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|+++|+|+++++++++.++.++||+||+|+||+++|++...........+......|++|+..|+ |+++.+.||++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-eva~~~~~l~s  233 (253)
T PRK08993        155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPS-DLMGPVVFLAS  233 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            88999999999999999999999999999999999999998764432222222233457999999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.+.+++|+++.+|||+..
T Consensus       234 ~~~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        234 SASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             ccccCccCcEEEECCCEec
Confidence            9999999999999999754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=4.2e-44  Score=288.47  Aligned_cols=225  Identities=34%  Similarity=0.501  Sum_probs=198.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..+++|+++|||||||||.++|++|++.|++|++++|+.+++++++.++.+     ..+.....|++ +.++++++++.+
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-----~~~~~~~~DVt-D~~~~~~~i~~~   75 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-----GAALALALDVT-DRAAVEAAIEAL   75 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-----CceEEEeeccC-CHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999999999998853     36889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.|+++|+||||||.. ...++.+.+.++|++++++|+.|.++.+++++|.|.+++ .|.|||+||+.+..  ++|+..
T Consensus        76 ~~~~g~iDiLvNNAGl~-~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~--~y~~~~  151 (246)
T COG4221          76 PEEFGRIDILVNNAGLA-LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRY--PYPGGA  151 (246)
T ss_pred             HHhhCcccEEEecCCCC-cCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccc--cCCCCc
Confidence            99999999999999987 448889999999999999999999999999999999866 78999999999988  889999


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---hhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      .|+++|+++..|++.|+.|+..++|||.+|+||.+.|+.......+   ....+.+.    -....+|+ |+|+.+.|..
T Consensus       152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~----~~~~l~p~-dIA~~V~~~~  226 (246)
T COG4221         152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK----GGTALTPE-DIAEAVLFAA  226 (246)
T ss_pred             cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc----cCCCCCHH-HHHHHHHHHH
Confidence            9999999999999999999999999999999999988765544332   22222222    22345787 9999999998


Q ss_pred             cCC
Q 023555          252 HDS  254 (280)
Q Consensus       252 s~~  254 (280)
                      +..
T Consensus       227 ~~P  229 (246)
T COG4221         227 TQP  229 (246)
T ss_pred             hCC
Confidence            744

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-44  Score=305.74  Aligned_cols=247  Identities=26%  Similarity=0.380  Sum_probs=209.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.      .++.++.+|++ +.++++++++++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~-~~~~~~~~~~~~   74 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG------DHVLVVEGDVT-SYADNQRAVDQT   74 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCC-CHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888776655541      25778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHH----HHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEE----WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      .+.++++|++|||||+.....++.+.+.++    |++++++|+.+++.++++++|.|+++  +|+||+++|..+..  +.
T Consensus        75 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~--~~  150 (263)
T PRK06200         75 VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFY--PG  150 (263)
T ss_pred             HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcC--CC
Confidence            999999999999999864334555666665    88999999999999999999999753  58999999988776  55


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhhcCCCCCCCCCChH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      ++...|++||+|++.|+++++.+++++ |+||+|+||+++|++.....         ..+...+......|++|+.+|+ 
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-  228 (263)
T PRK06200        151 GGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPE-  228 (263)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHH-
Confidence            678899999999999999999999885 99999999999999854210         0111223344557999999999 


Q ss_pred             HHHHHHHHhhcCC-CCcccccEEEeCCcccCCCC
Q 023555          242 ALTSLVRYLVHDS-SEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       242 ~va~~~~~l~s~~-~~~i~G~~i~vdgG~~~~~~  274 (280)
                      |+++.+.||+++. +.++||++|.+|||+++.+.
T Consensus       229 eva~~~~fl~s~~~~~~itG~~i~vdgG~~~~~~  262 (263)
T PRK06200        229 DHTGPYVLLASRRNSRALTGVVINADGGLGIRGI  262 (263)
T ss_pred             HHhhhhhheecccccCcccceEEEEcCceeeccc
Confidence            9999999999998 99999999999999988764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=6.5e-44  Score=307.73  Aligned_cols=247  Identities=23%  Similarity=0.337  Sum_probs=209.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+.+.   +.++.++.+|++ +.+++++++
T Consensus        44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~  119 (294)
T PRK07985         44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC---GRKAVLLPGDLS-DEKFARSLV  119 (294)
T ss_pred             CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc---CCeEEEEEccCC-CHHHHHHHH
Confidence            3468999999999999999999999999999999988753  3455554444332   235778899999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+..  +.+
T Consensus       120 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~--~~~  194 (294)
T PRK07985        120 HEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQ--PSP  194 (294)
T ss_pred             HHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhcc--CCC
Confidence            9999999999999999997544456778899999999999999999999999999964   47999999988876  567


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++..|++||+|++.|++.++.+++++||+||+|+||+++|++..... ..+.... .....|+++++.|+ |+|+++.||
T Consensus       195 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~r~~~pe-dva~~~~fL  272 (294)
T PRK07985        195 HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ-FGQQTPMKRAGQPA-ELAPVYVYL  272 (294)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHH-HhccCCCCCCCCHH-HHHHHHHhh
Confidence            88899999999999999999999999999999999999999853211 1222222 33447999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.+.++||+++.+|||+++
T Consensus       273 ~s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        273 ASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             hChhcCCccccEEeeCCCeeC
Confidence            999999999999999999875

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-44  Score=302.55  Aligned_cols=245  Identities=27%  Similarity=0.408  Sum_probs=209.8

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.      .++.++.+|++ +.+++++++++
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~-~~~~~~~~~~~   73 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG------ERARFIATDIT-DDAAIERAVAT   73 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CeeEEEEecCC-CHHHHHHHHHH
Confidence            346889999999999999999999999999999999999887777665541      26778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||.... .. .+.+.++|++.+++|+.+++.++++++|.|. + +.|+||++||..+..  +.+++
T Consensus        74 ~~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~g~ii~isS~~~~~--~~~~~  147 (261)
T PRK08265         74 VVARFGRVDILVNLACTYLD-DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-GGGAIVNFTSISAKF--AQTGR  147 (261)
T ss_pred             HHHHhCCCCEEEECCCCCCC-Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-CCcEEEEECchhhcc--CCCCC
Confidence            99999999999999997532 22 3568899999999999999999999999997 3 368999999988766  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch--hhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK--DWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ..|+++|++++.++++++.|++++||+||+|+||+++|++.......  ...........|++++.+|+ |+|+++.||+
T Consensus       148 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~~l~  226 (261)
T PRK08265        148 WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPE-EVAQVVAFLC  226 (261)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHH-HHHHHHHHHc
Confidence            89999999999999999999999999999999999999986543221  11122222346899999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++.+.++||++|.+|||+++.
T Consensus       227 s~~~~~~tG~~i~vdgg~~~~  247 (261)
T PRK08265        227 SDAASFVTGADYAVDGGYSAL  247 (261)
T ss_pred             CccccCccCcEEEECCCeecc
Confidence            999999999999999998754

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-43  Score=298.84  Aligned_cols=248  Identities=28%  Similarity=0.421  Sum_probs=216.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++++.+.+++.+..   .+..++.+|++ +.++++++++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~~~   79 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG---GKAEALACHIG-EMEQIDALFAHI   79 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCC-CHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888888888775432   25677899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|......++.+.+.+++++.+++|+.+++.++++++|+|++.+ .++||++||..+..  +.+++.
T Consensus        80 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~  156 (252)
T PRK07035         80 RERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVS--PGDFQG  156 (252)
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcC--CCCCCc
Confidence            999999999999999754445667889999999999999999999999999997644 68999999988765  567889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||++++.|+++++.++.++||+||+|+||+++|++.......+...+......|.++..+|+ |+++.+.||+++.
T Consensus       157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~  235 (252)
T PRK07035        157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPS-EMAGAVLYLASDA  235 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998765433322223333447899999999 9999999999999


Q ss_pred             CCcccccEEEeCCccc
Q 023555          255 SEYVSGNIFIVDSGAT  270 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~  270 (280)
                      ..+++|+++.+|||++
T Consensus       236 ~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        236 SSYTTGECLNVDGGYL  251 (252)
T ss_pred             ccCccCCEEEeCCCcC
Confidence            9999999999999975

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-43  Score=303.42  Aligned_cols=251  Identities=30%  Similarity=0.469  Sum_probs=215.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.+++..+++
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~v~~~~~   79 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA---GGEALAVKADVL-DKESLEQARQ   79 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHH
Confidence            344789999999999999999999999999999999999988888887777543   236788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCC--------------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEE
Q 023555           93 KAWEAFGRIDALVNNAGVSGAV--------------KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVIN  158 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~--------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~  158 (280)
                      ++.+.++++|++|||||...+.              .++.+.+.++|++.+++|+.+++.++++++|.|.+.+ .|+||+
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~  158 (278)
T PRK08277         80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIIN  158 (278)
T ss_pred             HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence            9999999999999999964322              2456788999999999999999999999999998754 689999


Q ss_pred             EeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-----hhhhhhhhcCCCC
Q 023555          159 ISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-----DWLNNVASRTYPL  233 (280)
Q Consensus       159 vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~p~  233 (280)
                      +||..+..  +.++...|++||+|++.|+++++.+++++||+||+|+||+++|++.+.....     ....+......|+
T Consensus       159 isS~~~~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~  236 (278)
T PRK08277        159 ISSMNAFT--PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPM  236 (278)
T ss_pred             EccchhcC--CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCc
Confidence            99998876  6678899999999999999999999999999999999999999986543211     1111222334799


Q ss_pred             CCCCCChHHHHHHHHHhhcC-CCCcccccEEEeCCcccC
Q 023555          234 RDFGTTDPALTSLVRYLVHD-SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       234 ~~~~~~~~~va~~~~~l~s~-~~~~i~G~~i~vdgG~~~  271 (280)
                      +|+++|+ |+|+++.||+++ .+.++||++|.+|||++.
T Consensus       237 ~r~~~~~-dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        237 GRFGKPE-ELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             cCCCCHH-HHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            9999999 999999999999 899999999999999763

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-43  Score=299.68  Aligned_cols=244  Identities=27%  Similarity=0.444  Sum_probs=206.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++|++|||||++|||++++++|++.|++|++++ |+.+.+++...++...   +.+...+.+|++ +.++++.+++++.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   77 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---GGSAFSIGANLE-SLHGVEALYSSLD   77 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc---CCceEEEecccC-CHHHHHHHHHHHH
Confidence            5789999999999999999999999999998875 5667777776666543   235677899999 7788998888876


Q ss_pred             HH----cC--CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           96 EA----FG--RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        96 ~~----~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +.    ++  ++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|++   .|+||++||..+..  +
T Consensus        78 ~~~~~~~g~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~  151 (252)
T PRK12747         78 NELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRI--S  151 (252)
T ss_pred             HHhhhhcCCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCccccc--C
Confidence            53    34  899999999975 4456778899999999999999999999999999965   48999999998876  5


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .+++..|++||+|+++|+++++.+++++||+||+|+||+++|++.......+..........|++++..|+ |+++.+.|
T Consensus       152 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~  230 (252)
T PRK12747        152 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVE-DIADTAAF  230 (252)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHH-HHHHHHHH
Confidence            67888999999999999999999999999999999999999998764433322233333335788999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+++.+.++||+.+.+|||+.+
T Consensus       231 l~s~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        231 LASPDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             HcCccccCcCCcEEEecCCccC
Confidence            9999999999999999999864

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-43  Score=300.60  Aligned_cols=249  Identities=32%  Similarity=0.502  Sum_probs=213.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++.++++|++|||||++|||++++++|+++|++|++++|+ ++.+++.+.+.+.   +.++.++.+|++ +.++++++++
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~i~~~~~   83 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE---GRKVTFVQVDLT-KPESAEKVVK   83 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHHH
Confidence            5567899999999999999999999999999999999998 5555555555432   236788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+.
T Consensus        84 ~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  159 (258)
T PRK06935         84 EALEEFGKIDILVNNAGTI-RRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQ--GGKF  159 (258)
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhcc--CCCC
Confidence            9999999999999999986 345677888999999999999999999999999998754 68999999988765  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|+++|+|+++++++++++++++||+||+|+||+++|++.+.....+..........|.++...|+ |+++.+.||++
T Consensus       160 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s  238 (258)
T PRK06935        160 VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPD-DLMGAAVFLAS  238 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            88999999999999999999999999999999999999998654432222222233347899999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.+.++||+++.+|||+.+
T Consensus       239 ~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        239 RASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             hhhcCCCCCEEEECCCeec
Confidence            9999999999999999765

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-43  Score=306.72  Aligned_cols=248  Identities=27%  Similarity=0.399  Sum_probs=211.9

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +..+++|++|||||++|||+++++.|+++|++|++++++.+  ..++..+.+...   +.++.++.+|++ +.+++++++
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~v~~~~  125 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE---GRKAVALPGDLK-DEAFCRQLV  125 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc---CCeEEEEecCCC-CHHHHHHHH
Confidence            44688999999999999999999999999999999887643  345555555442   236778999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|.+   +++||++||..+..  +.+
T Consensus       126 ~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~--~~~  200 (300)
T PRK06128        126 ERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQ--PSP  200 (300)
T ss_pred             HHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccC--CCC
Confidence            9999999999999999997644556778899999999999999999999999999964   47999999988876  557


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++..|++||+|++.|+++++.++.++||+||+|+||+++|++..... ..+.... .....|++|++.|+ |++.++.||
T Consensus       201 ~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~-~~~~~p~~r~~~p~-dva~~~~~l  278 (300)
T PRK06128        201 TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPD-FGSETPMKRPGQPV-EMAPLYVLL  278 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHH-HhcCCCCCCCcCHH-HHHHHHHHH
Confidence            88899999999999999999999999999999999999999864321 2222222 33447999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.+.+++|++|.+|||+.++
T Consensus       279 ~s~~~~~~~G~~~~v~gg~~~~  300 (300)
T PRK06128        279 ASQESSYVTGEVFGVTGGLLLS  300 (300)
T ss_pred             hCccccCccCcEEeeCCCEeCc
Confidence            9999999999999999998764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-43  Score=300.08  Aligned_cols=243  Identities=25%  Similarity=0.376  Sum_probs=208.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.    .++.++.+|++ +.++++++++++.+.+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~-d~~~~~~~~~~~~~~~g~   76 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY----GEVYAVKADLS-DKDDLKNLVKEAWELLGG   76 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEcCCC-CHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999999999999998888888877542    25678899999 789999999999999999


Q ss_pred             ccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          101 IDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       101 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      +|++|||||.... ..++.+.+.++|.+.+++|+.+++.+.+.++|.|.+++..|+||++||..+..  +.++...|+++
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y~~s  154 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE--PMPPLVLADVT  154 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC--CCCCchHHHHH
Confidence            9999999997532 23566788999999999999999999999999987544478999999988765  56788899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----------chhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----------KKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----------~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      |+|+.+|+|+++.+++++||+||+|+||+++|++.+...          .++..........|++|+++|+ |+|+++.|
T Consensus       155 Kaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~f  233 (259)
T PRK08340        155 RAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWE-ELGSLIAF  233 (259)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHH-HHHHHHHH
Confidence            999999999999999999999999999999999864211          1111112223347999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+++.++++||+++.+|||+..
T Consensus       234 L~s~~~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        234 LLSENAEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             HcCcccccccCceEeecCCcCC
Confidence            9999999999999999999764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-43  Score=298.48  Aligned_cols=250  Identities=26%  Similarity=0.477  Sum_probs=219.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++++|++|||||+++||++++++|+++|++|++++|+++++++..+.+.+.   +.++.++.+|++ +.+++++++++
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~---~~~~~~~~~D~~-~~~~~~~~~~~   80 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ---GLSAHALAFDVT-DHDAVRAAIDA   80 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CceEEEEEccCC-CHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998888777777543   236888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.++|.++. .|+||++||..+..  +.+++
T Consensus        81 ~~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~--~~~~~  156 (255)
T PRK07523         81 FEAEIGPIDILVNNAGMQ-FRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSAL--ARPGI  156 (255)
T ss_pred             HHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhcc--CCCCC
Confidence            999999999999999986 345777889999999999999999999999999998644 68999999987765  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|+++|++++.++++++.+++++||+||+|+||+++|++.......+....+.....|++++..|+ |+|+.+.||+++
T Consensus       157 ~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~  235 (255)
T PRK07523        157 APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVE-ELVGACVFLASD  235 (255)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998764433333334445557999999998 999999999999


Q ss_pred             CCCcccccEEEeCCcccCC
Q 023555          254 SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+.++||+++.+|||++.+
T Consensus       236 ~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        236 ASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             hhcCccCcEEEECCCeecc
Confidence            9999999999999998765

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-44  Score=307.61  Aligned_cols=254  Identities=23%  Similarity=0.315  Sum_probs=197.3

Q ss_pred             CCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHh---------hcCCC---cceEEEEecc
Q 023555           15 CQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK---------QSGSS---VRAMAVELDV   80 (280)
Q Consensus        15 ~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~D~   80 (280)
                      .+++||++||||++  +|||+++|+.|+++|++|++.++.+ .+....+....         ..+..   .++..+..|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            37899999999996  9999999999999999999987642 11111110000         00000   0011112222


Q ss_pred             CC-----------------CHHHHHHHHHHHHHHcCCccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 023555           81 SA-----------------NGAAIENSVQKAWEAFGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKY  142 (280)
Q Consensus        81 ~~-----------------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  142 (280)
                      ++                 +.++++++++++.+++|++|++|||||.... ..++.+++.++|++.+++|+.+++.++|+
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH  162 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            21                 1246999999999999999999999987432 46788999999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEEeccccccCCCCCCCC-CChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCccch
Q 023555          143 VCIRMRDANQEGSVINISSIAATSRGQLPGGV-AYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMKK  220 (280)
Q Consensus       143 ~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~~~~  220 (280)
                      ++|+|++   .|++|+++|..+..  +.|++. .|++||+|+++|+++++.|+++ +|||||+|+||+++|++.......
T Consensus       163 ~~p~m~~---~G~ii~iss~~~~~--~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~  237 (299)
T PRK06300        163 FGPIMNP---GGSTISLTYLASMR--AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI  237 (299)
T ss_pred             HHHHhhc---CCeEEEEeehhhcC--cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc
Confidence            9999964   47999999988765  556654 7999999999999999999987 599999999999999987543211


Q ss_pred             hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          221 DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       221 ~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +...+......|+++..+|+ |++.++.||+++.+.++||+++.+|||+++.|+|
T Consensus       238 ~~~~~~~~~~~p~~r~~~pe-evA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  291 (299)
T PRK06300        238 ERMVDYYQDWAPLPEPMEAE-QVGAAAAFLVSPLASAITGETLYVDHGANVMGIG  291 (299)
T ss_pred             HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEECCCcceecCC
Confidence            11222233447899999998 9999999999999999999999999999998876

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-43  Score=296.27  Aligned_cols=249  Identities=29%  Similarity=0.481  Sum_probs=217.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.   +.++..+.+|++ +.++++++++++
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~i~~~~~~~   78 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA---GGEALFVACDVT-RDAEVKALVEQT   78 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888877777553   236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|......++.+.+.+++++.+++|+.+++.++++++|+|.+++ .+++|++||..+..  +.+++.
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~~  155 (253)
T PRK06172         79 IAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLG--AAPKMS  155 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcc--CCCCCc
Confidence            999999999999999864445567889999999999999999999999999997654 68999999988776  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|+++|+|++.|+++++.++.++||+||+|+||+++|++...... .+...+......|+++..+|+ |+++.+.||+++
T Consensus       156 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~ia~~~~~l~~~  234 (253)
T PRK06172        156 IYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVE-EVASAVLYLCSD  234 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHH-HHHHHHHHHhCc
Confidence            999999999999999999999999999999999999999765432 222223333447889999999 999999999999


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.+++|++|.+|||++.
T Consensus       235 ~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        235 GASFTTGHALMVDGGATA  252 (253)
T ss_pred             cccCcCCcEEEECCCccC
Confidence            999999999999999864

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-43  Score=304.23  Aligned_cols=244  Identities=30%  Similarity=0.444  Sum_probs=207.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh---------hHHHHHHHHHHhhcCCCcceEEEEeccCCCHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---------DRLKSLCDEINKQSGSSVRAMAVELDVSANGA   85 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (280)
                      ..+++|++|||||++|||+++|++|+++|++|++++++.         +.+++..+++...   +.++..+.+|++ +.+
T Consensus         2 ~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-~~~   77 (286)
T PRK07791          2 GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA---GGEAVANGDDIA-DWD   77 (286)
T ss_pred             CccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc---CCceEEEeCCCC-CHH
Confidence            357899999999999999999999999999999998876         6677777777543   236778899999 789


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-----CCeEEEEe
Q 023555           86 AIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-----EGSVINIS  160 (280)
Q Consensus        86 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~vv~vs  160 (280)
                      +++++++++.+.+|++|++|||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|.++..     .|+||++|
T Consensus        78 ~v~~~~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~is  156 (286)
T PRK07791         78 GAANLVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTS  156 (286)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeC
Confidence            999999999999999999999999863 356778999999999999999999999999999975421     37999999


Q ss_pred             ccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCC--CCCC
Q 023555          161 SIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR--DFGT  238 (280)
Q Consensus       161 S~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~  238 (280)
                      |..+..  +.+++..|++||+|+++|+++++.|++++||+||+|+|| ++|++.....     .... ...+.+  +..+
T Consensus       157 S~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~-----~~~~-~~~~~~~~~~~~  227 (286)
T PRK07791        157 SGAGLQ--GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF-----AEMM-AKPEEGEFDAMA  227 (286)
T ss_pred             chhhCc--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH-----HHHH-hcCcccccCCCC
Confidence            988876  668889999999999999999999999999999999999 7888764321     1111 113333  3567


Q ss_pred             ChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       239 ~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      |+ |+++.+.||+++.+.++||+++.+|||+....
T Consensus       228 pe-dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  261 (286)
T PRK07791        228 PE-NVSPLVVWLGSAESRDVTGKVFEVEGGKISVA  261 (286)
T ss_pred             HH-HHHHHHHHHhCchhcCCCCcEEEEcCCceEEe
Confidence            88 99999999999999999999999999998754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=301.20  Aligned_cols=247  Identities=25%  Similarity=0.378  Sum_probs=205.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+..      +.++..+.+|++ +.++++++++++.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~------~~~~~~~~~D~~-~~~~~~~~~~~~~   74 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH------GDAVVGVEGDVR-SLDDHKEAVARCV   74 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc------CCceEEEEeccC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987766654321      235778899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCH----HHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTE----EEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +.++++|++|||||......++.+.+.    ++|++.+++|+.+++.++++++|.|.+.  +|++|+++|..+..  +.+
T Consensus        75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~--~~~  150 (262)
T TIGR03325        75 AAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFY--PNG  150 (262)
T ss_pred             HHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceec--CCC
Confidence            999999999999997533333333333    5799999999999999999999999763  47999999988765  556


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---chh-----hhhhhhhcCCCCCCCCCChHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---KKD-----WLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---~~~-----~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      +...|++||+|++.|+++++.+++++ |+||+|+||+++|++.....   ...     ...+......|++|+++|+ |+
T Consensus       151 ~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-ev  228 (262)
T TIGR03325       151 GGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAE-EY  228 (262)
T ss_pred             CCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChH-Hh
Confidence            77899999999999999999999987 99999999999999864311   110     1123334457999999999 99


Q ss_pred             HHHHHHhhcC-CCCcccccEEEeCCcccCCCCC
Q 023555          244 TSLVRYLVHD-SSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       244 a~~~~~l~s~-~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      ++.+.||+++ .+.++||++|.+|||+.+.++-
T Consensus       229 a~~~~~l~s~~~~~~~tG~~i~vdgg~~~~~~~  261 (262)
T TIGR03325       229 TGAYVFFATRGDTVPATGAVLNYDGGMGVRGFF  261 (262)
T ss_pred             hhheeeeecCCCcccccceEEEecCCeeecccc
Confidence            9999999997 4679999999999999988763

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-42  Score=293.04  Aligned_cols=249  Identities=28%  Similarity=0.458  Sum_probs=215.6

Q ss_pred             cCCCCCcEEEEecCCC-hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASS-GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~-giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ...+++|+++||||+| |||+++++.|+++|++|++++|+.++++...+++.+..+ ..++.++.+|++ +.++++++++
T Consensus        12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~   89 (262)
T PRK07831         12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELG-LGRVEAVVCDVT-SEAQVDALID   89 (262)
T ss_pred             ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEEccCC-CHHHHHHHHH
Confidence            3467899999999985 999999999999999999999999888888777765332 135778899999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+....|+||+++|..+..  +.++
T Consensus        90 ~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~  166 (262)
T PRK07831         90 AAVERLGRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR--AQHG  166 (262)
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--CCCC
Confidence            9999999999999999975 345677889999999999999999999999999998754368999999988765  5578


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|+++|+|+++|+++++.|++++||+||+|+||+++|++......++....+. ...|+++..+|+ |+++++.||++
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~-~~~~~~r~~~p~-~va~~~~~l~s  244 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELA-AREAFGRAAEPW-EVANVIAFLAS  244 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHH-hcCCCCCCcCHH-HHHHHHHHHcC
Confidence            8899999999999999999999999999999999999999876543333333333 346899999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcc
Q 023555          253 DSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~  269 (280)
                      +.+.++||+++.+|+++
T Consensus       245 ~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        245 DYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             chhcCcCCceEEeCCCC
Confidence            99999999999999976

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-42  Score=291.67  Aligned_cols=250  Identities=31%  Similarity=0.501  Sum_probs=213.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ||++|||||++|||+++++.|+++|++|++++|+.+.++++.+++.+.   +.++.++.+|++ +.++++++++++.+.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   76 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF---PGQVLTVQMDVR-NPEDVQKMVEQIDEKF   76 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999988888777776543   236788999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++++|.+++..|+||++||..+..  +.++...|++
T Consensus        77 ~~id~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~Y~~  153 (252)
T PRK07677         77 GRIDALINNAAGN-FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD--AGPGVIHSAA  153 (252)
T ss_pred             CCccEEEECCCCC-CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc--CCCCCcchHH
Confidence            9999999999864 335667889999999999999999999999999997654468999999998765  5567889999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCcc-ccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          179 SKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEI-TEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      ||+|+++|+++++.++.+ +||+||+|+||+++|+. .......+...+...+..|++++.+|+ |+++++.||+++.+.
T Consensus       154 sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~  232 (252)
T PRK07677        154 AKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPE-EIAGLAYFLLSDEAA  232 (252)
T ss_pred             HHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHH-HHHHHHHHHcCcccc
Confidence            999999999999999975 69999999999999643 222222222222333447889999998 999999999999889


Q ss_pred             cccccEEEeCCcccCCCCCC
Q 023555          257 YVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~~~~~~  276 (280)
                      ++||+++.+|||+++..-||
T Consensus       233 ~~~g~~~~~~gg~~~~~~~~  252 (252)
T PRK07677        233 YINGTCITMDGGQWLNQYPF  252 (252)
T ss_pred             ccCCCEEEECCCeecCCCCC
Confidence            99999999999999988776

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.7e-42  Score=293.20  Aligned_cols=246  Identities=24%  Similarity=0.428  Sum_probs=213.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++...++.+.   +.++.++.+|++ +.++++++++++.+.+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~   77 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD---GGKAIAVKADVS-DRDQVFAAVRQVVDTF   77 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHHHHHHHc
Confidence            789999999999999999999999999999999988888887777543   236778999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++.+++.|++.+..++||++||..+..  +.++...|++
T Consensus        78 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~  154 (256)
T PRK08643         78 GDLNVVVNNAGVA-PTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV--GNPELAVYSS  154 (256)
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc--CCCCCchhHH
Confidence            9999999999975 445677889999999999999999999999999997755458999999988766  5678889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      +|++++.|++.++.++.++||+||+|+||+++|++......         ..+.........|++++.+|+ |+++.+.|
T Consensus       155 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~  233 (256)
T PRK08643        155 TKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPE-DVANCVSF  233 (256)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHH-HHHHHHHH
Confidence            99999999999999999999999999999999998654221         111112223346889999998 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++.+.++||+++.+|||+.++
T Consensus       234 L~~~~~~~~~G~~i~vdgg~~~~  256 (256)
T PRK08643        234 LAGPDSDYITGQTIIVDGGMVFH  256 (256)
T ss_pred             HhCccccCccCcEEEeCCCeecC
Confidence            99999999999999999998764

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=8.4e-43  Score=295.56  Aligned_cols=237  Identities=26%  Similarity=0.479  Sum_probs=204.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..              .++.++.+|++ +.++++++++++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------------~~~~~~~~D~~-~~~~i~~~~~~~   66 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------------NDVDYFKVDVS-NKEQVIKGIDYV   66 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------------CceEEEEccCC-CHHHHHHHHHHH
Confidence            468999999999999999999999999999999999986431              14678899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+++.
T Consensus        67 ~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  142 (258)
T PRK06398         67 ISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFA--VTRNAA  142 (258)
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhcc--CCCCCc
Confidence            99999999999999985 446778889999999999999999999999999998654 68999999988876  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc------chhhhh---hhhhcCCCCCCCCCChHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM------KKDWLN---NVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~------~~~~~~---~~~~~~~p~~~~~~~~~~va~  245 (280)
                      .|++||+|+++|+++++.|+.++ |+||+|+||+++|++.....      ......   .......|++++..|+ |+++
T Consensus       143 ~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-eva~  220 (258)
T PRK06398        143 AYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPE-EVAY  220 (258)
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHH-HHHH
Confidence            99999999999999999999876 99999999999999864321      111111   1122346899999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+.||+++.+.+++|+++.+|||+...
T Consensus       221 ~~~~l~s~~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        221 VVAFLASDLASFITGECVTVDGGLRAL  247 (258)
T ss_pred             HHHHHcCcccCCCCCcEEEECCccccC
Confidence            999999999999999999999998654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=2e-42  Score=291.41  Aligned_cols=246  Identities=30%  Similarity=0.477  Sum_probs=208.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+..  ++..+.+.+.   +.++..+.+|++ +.++++++++++.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   75 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL---GRRFLSLTADLS-DIEAIKALVDSAV   75 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc---CCceEEEECCCC-CHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999752  3334444332   236788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++++|.+++..|++|++||..+..  +.+....
T Consensus        76 ~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  152 (248)
T TIGR01832        76 EEFGHIDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ--GGIRVPS  152 (248)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc--CCCCCch
Confidence            99999999999999863 34666788999999999999999999999999997654368999999987765  4567789


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|++.++++++.+++++||+||+|+||+++|++.+................|.+++.+|+ |+|+++.||+++..
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~~  231 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPD-DIGGPAVFLASSAS  231 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999998754332211122223347889999999 99999999999989


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .+++|+++.+|||+.+
T Consensus       232 ~~~~G~~i~~dgg~~~  247 (248)
T TIGR01832       232 DYVNGYTLAVDGGWLA  247 (248)
T ss_pred             cCcCCcEEEeCCCEec
Confidence            9999999999999864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7e-42  Score=290.35  Aligned_cols=248  Identities=31%  Similarity=0.520  Sum_probs=212.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+. +..+...+++...   +.++.++.+|++ +.++++++++.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~i~~~~~~~   79 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA---GGEAIAVKGDVT-VESDVVNLIQTA   79 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEecCC-CHHHHHHHHHHH
Confidence            58899999999999999999999999999999988854 4556666666442   236778999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|... ..+..+.+.++|++.+++|+.+++.++++++++|.+.+..|+||++||..+..  +.+++.
T Consensus        80 ~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~--~~~~~~  156 (261)
T PRK08936         80 VKEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI--PWPLFV  156 (261)
T ss_pred             HHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC--CCCCCc
Confidence            999999999999999753 35667789999999999999999999999999998765568999999987765  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|+|++.|+++++.++.++||+||+|+||+++|++.......+..........|++++.+|+ |+++.+.||+++.
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~~  235 (261)
T PRK08936        157 HYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPE-EIAAVAAWLASSE  235 (261)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999998654322222122223457889999998 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      +.+++|+++.+|||+++
T Consensus       236 ~~~~~G~~i~~d~g~~~  252 (261)
T PRK08936        236 ASYVTGITLFADGGMTL  252 (261)
T ss_pred             cCCccCcEEEECCCccc
Confidence            99999999999999873

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-42  Score=291.00  Aligned_cols=242  Identities=29%  Similarity=0.412  Sum_probs=208.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.+.      ..     ...++.++.+|++ +.++++++++.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~~-----~~~~~~~~~~D~~-~~~~~~~~~~~~   69 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------TV-----DGRPAEFHAADVR-DPDQVAALVDAI   69 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------hh-----cCCceEEEEccCC-CHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998754      11     1235778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. +..+..+.+.++|++.+++|+.+++.+++++.+.|.++...|+||++||..+..  +.+++.
T Consensus        70 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~  146 (252)
T PRK07856         70 VERHGRLDVLVNNAGGS-PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR--PSPGTA  146 (252)
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC--CCCCCc
Confidence            99999999999999975 445667788999999999999999999999999998654468999999988876  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.|++.++.+++++ |+||+|+||+++|++.......+..........|++++..|+ |+++.+.||+++.
T Consensus       147 ~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~va~~~~~L~~~~  224 (252)
T PRK07856        147 AYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPA-DIAWACLFLASDL  224 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            99999999999999999999988 999999999999998654322222222233457899999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccCCC
Q 023555          255 SEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~~  273 (280)
                      ++++||+.|.+|||...+.
T Consensus       225 ~~~i~G~~i~vdgg~~~~~  243 (252)
T PRK07856        225 ASYVSGANLEVHGGGERPA  243 (252)
T ss_pred             cCCccCCEEEECCCcchHH
Confidence            9999999999999987764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-42  Score=290.98  Aligned_cols=248  Identities=28%  Similarity=0.437  Sum_probs=213.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |+.+++|++|||||+++||+++|+.|+++|++|++++|+.+..++..+++.      .++.++.+|++ +.+++++++++
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~-~~~~~~~~~~~   73 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG------PAAIAVSLDVT-RQDSIDRIVAA   73 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC------CceEEEEccCC-CHHHHHHHHHH
Confidence            356889999999999999999999999999999999999888777666542      25778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++++++.|.++..+++||++||..+..  +.+++
T Consensus        74 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~  150 (257)
T PRK07067         74 AVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR--GEALV  150 (257)
T ss_pred             HHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC--CCCCC
Confidence            999999999999999976 345677889999999999999999999999999997754468999999987765  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhhcCCCCCCCCCChHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      ..|++||++++.++++++.+++++||+||+|.||+++|++.....         .............|++++..|+ |+|
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  229 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPD-DLT  229 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHH-HHH
Confidence            999999999999999999999999999999999999999754321         0111122233457899999999 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.||+++.+.+++|+++.+|||..++
T Consensus       230 ~~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        230 GMALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHHHHHhCcccccccCcEEeecCCEeCC
Confidence            9999999999999999999999997653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.3e-42  Score=289.17  Aligned_cols=242  Identities=29%  Similarity=0.431  Sum_probs=206.1

Q ss_pred             cCCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecC-----------hhHHHHHHHHHHhhcCCCcceEEEEecc
Q 023555           14 WCQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARR-----------VDRLKSLCDEINKQSGSSVRAMAVELDV   80 (280)
Q Consensus        14 ~~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~D~   80 (280)
                      |.+++||++|||||+  +|||+++|++|+++|++|++++|+           .+...+..+++.+.   +.++.++.+|+
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~   77 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN---GVKVSSMELDL   77 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc---CCeEEEEEcCC
Confidence            357899999999999  499999999999999999988643           22333444555432   34788899999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      + +.++++++++++.+.+|++|++|||||.. ...++.+.+.++|++.+++|+.+++.+.++++|.|.+++ .|+||++|
T Consensus        78 ~-~~~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~is  154 (256)
T PRK12859         78 T-QNDAPKELLNKVTEQLGYPHILVNNAAYS-TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMT  154 (256)
T ss_pred             C-CHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEc
Confidence            9 78999999999999999999999999985 345778899999999999999999999999999997644 68999999


Q ss_pred             ccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCCh
Q 023555          161 SIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTD  240 (280)
Q Consensus       161 S~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (280)
                      |..+..  +.+++..|+++|++++.|+++++.+++++||+||+|+||+++|++...    . ..+......|+++..+|+
T Consensus       155 S~~~~~--~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~-~~~~~~~~~~~~~~~~~~  227 (256)
T PRK12859        155 SGQFQG--PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----E-IKQGLLPMFPFGRIGEPK  227 (256)
T ss_pred             ccccCC--CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----H-HHHHHHhcCCCCCCcCHH
Confidence            988765  667889999999999999999999999999999999999999986432    1 122223346888888998


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                       |+++.+.||+++.+.+++|+++.+|||+
T Consensus       228 -d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        228 -DAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             -HHHHHHHHHhCccccCccCcEEEeCCCc
Confidence             9999999999999999999999999996

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-42  Score=288.89  Aligned_cols=248  Identities=31%  Similarity=0.493  Sum_probs=211.2

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ..+.+++++|++|||||+++||+++++.|+++|++|++++|+.+.. ....++.     ..++..+.+|++ +.++++++
T Consensus         7 ~~~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~-----~~~~~~~~~Dl~-~~~~~~~~   79 (255)
T PRK06841          7 FDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL-----GGNAKGLVCDVS-DSQSVEAA   79 (255)
T ss_pred             chhhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh-----CCceEEEEecCC-CHHHHHHH
Confidence            3444678999999999999999999999999999999999987643 2333332     225668899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++++.++|.+.. .++||++||..+..  +.
T Consensus        80 ~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~  155 (255)
T PRK06841         80 VAAVISAFGRIDILVNSAGVA-LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVV--AL  155 (255)
T ss_pred             HHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhcc--CC
Confidence            999999999999999999986 345666788999999999999999999999999997754 68999999988765  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|+++|++++.++++++.+++++||+||+|+||+++|++....+....... .....|.+++..|+ |+++.+.+|
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~va~~~~~l  233 (255)
T PRK06841        156 ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGER-AKKLIPAGRFAYPE-EIAAAALFL  233 (255)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHH-HHhcCCCCCCcCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999998654332222222 23347899999998 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.+.+++|+++.+|||+++
T Consensus       234 ~~~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        234 ASDAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             cCccccCccCCEEEECCCccC
Confidence            999999999999999999876

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=9.6e-42  Score=292.40  Aligned_cols=251  Identities=26%  Similarity=0.403  Sum_probs=209.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +..++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.    ...++.++.+|++ +.++++++++
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~-d~~~~~~~~~   86 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG----GEPNVCFFHCDVT-VEDDVSRAVD   86 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc----CCCceEEEEeecC-CHHHHHHHHH
Confidence            4557899999999999999999999999999999999999877776666552    1236888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      ++.+.++++|++|||||..... .++.+.+.++|++.+++|+.+++.+++++++.|.++. .|++|+++|..+..  +.+
T Consensus        87 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~--~~~  163 (280)
T PLN02253         87 FTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAI--GGL  163 (280)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcc--cCC
Confidence            9999999999999999976432 4567889999999999999999999999999997643 68999999988765  446


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-----hhh---hhhhcCCCC-CCCCCChHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-----WLN---NVASRTYPL-RDFGTTDPA  242 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-----~~~---~~~~~~~p~-~~~~~~~~~  242 (280)
                      +...|++||+|++.++++++.|++++||+||+|+||+++|++.....+..     ...   .......++ ++...|+ |
T Consensus       164 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-d  242 (280)
T PLN02253        164 GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVD-D  242 (280)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHH-H
Confidence            67799999999999999999999999999999999999998754321111     111   111122333 4567788 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++++.||+++.+.+++|++|.+|||++..
T Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
T PLN02253        243 VANAVLFLASDEARYISGLNLMIDGGFTCT  272 (280)
T ss_pred             HHHHHHhhcCcccccccCcEEEECCchhhc
Confidence            999999999999999999999999998653

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=288.35  Aligned_cols=252  Identities=26%  Similarity=0.448  Sum_probs=219.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++....+ +.++.++.+|++ +.++++++++++
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~~   82 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP-EREVHGLAADVS-DDEDRRAILDWV   82 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEECCCC-CHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888888887765432 347888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|.. ...+..+.+.+++++.+++|+.+++.++++++|+|++++ .++||++||..+..  +.++..
T Consensus        83 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~~  158 (257)
T PRK09242         83 EDHWDGLHILVNNAGGN-IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLT--HVRSGA  158 (257)
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCC--CCCCCc
Confidence            99999999999999975 345667889999999999999999999999999997644 68999999988766  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.++++++.++.++||+||+|+||+++|++.......+...+......|.++..+|+ |+++++.||+++.
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~  237 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPE-EVAAAVAFLCMPA  237 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998765443332222233457889999998 9999999999988


Q ss_pred             CCcccccEEEeCCcccCCC
Q 023555          255 SEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~~  273 (280)
                      ..+++|+.+.+|||++..|
T Consensus       238 ~~~~~g~~i~~~gg~~~~~  256 (257)
T PRK09242        238 ASYITGQCIAVDGGFLRYG  256 (257)
T ss_pred             cccccCCEEEECCCeEeec
Confidence            8999999999999987544

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=288.05  Aligned_cols=251  Identities=26%  Similarity=0.474  Sum_probs=218.3

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +..++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.+++.++++
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~   80 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA---GGAAEALAFDIA-DEEAVAAAFA   80 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCC-CHHHHHHHHH
Confidence            455799999999999999999999999999999999999988888887777542   235788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+++++.|.+.+ .+++|++||..+..  +.++
T Consensus        81 ~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~  156 (256)
T PRK06124         81 RIDAEHGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQV--ARAG  156 (256)
T ss_pred             HHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhcc--CCCC
Confidence            99999999999999999763 45677889999999999999999999999999997654 68999999988766  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|+++|++++.+++.++.+++++||+||+|+||+++|++.......+..........|++++..|+ |+++.+.||++
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~  235 (256)
T PRK06124        157 DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPE-EIAGAAVFLAS  235 (256)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            89999999999999999999999999999999999999998654322222223334447889999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCC
Q 023555          253 DSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.++++||+.+.+|||+.++
T Consensus       236 ~~~~~~~G~~i~~dgg~~~~  255 (256)
T PRK06124        236 PAASYVNGHVLAVDGGYSVH  255 (256)
T ss_pred             cccCCcCCCEEEECCCcccc
Confidence            99999999999999998753

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=289.44  Aligned_cols=250  Identities=32%  Similarity=0.536  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+ ..+..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~v~~~~~~~   76 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR---GHRCTAVVADVR-DPASVAAAIKRA   76 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh---CCceEEEECCCC-CHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999875 33444444332   236778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.++++++++|.+.+ .++||++||..+.. .+.+++.
T Consensus        77 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~-~~~~~~~  153 (263)
T PRK08226         77 KEKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDM-VADPGET  153 (263)
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc-cCCCCcc
Confidence            99999999999999986 445777888999999999999999999999999997644 67999999977632 1456788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------hhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------KDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      .|+++|++++.++++++.+++++||+||+|+||+++|++......      ............|++++.+|+ |+++.+.
T Consensus       154 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~~~  232 (263)
T PRK08226        154 AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPL-EVGELAA  232 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHH-HHHHHHH
Confidence            999999999999999999999999999999999999998654321      111222233447899999998 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ||+++.+.++||+++.+|||+++++
T Consensus       233 ~l~~~~~~~~~g~~i~~dgg~~~~~  257 (263)
T PRK08226        233 FLASDESSYLTGTQNVIDGGSTLPE  257 (263)
T ss_pred             HHcCchhcCCcCceEeECCCcccCc
Confidence            9999999999999999999998764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-42  Score=296.79  Aligned_cols=244  Identities=20%  Similarity=0.273  Sum_probs=196.8

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh----------hHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV----------DRLKSLCDEINKQSGSSVRAMAVELDVSAN   83 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (280)
                      +++|++|+++||||++|||+++|++|++.|++|++++|+.          +.+++..+++...   +.++.++.+|++ +
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-~   78 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA---GGRGIAVQVDHL-V   78 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc---CCceEEEEcCCC-C
Confidence            3578999999999999999999999999999999999973          3455555666432   235778899999 7


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECC-CCCC---CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNA-GVSG---AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI  159 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~v  159 (280)
                      .++++++++++.+.+|++|++|||| |...   ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ +|+||++
T Consensus        79 ~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~i  157 (305)
T PRK08303         79 PEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEI  157 (305)
T ss_pred             HHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEE
Confidence            8999999999999999999999999 7521   124667788999999999999999999999999997643 6899999


Q ss_pred             eccccccC-CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--chhhhhhhhhcCCC-CCC
Q 023555          160 SSIAATSR-GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASRTYP-LRD  235 (280)
Q Consensus       160 sS~~~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~p-~~~  235 (280)
                      ||..+... .+.+....|++||+|+.+|+++++.|++++|||||+|+||+++|++.....  .+........ ..| +++
T Consensus       158 sS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~p~~~~  236 (305)
T PRK08303        158 TDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA-KEPHFAI  236 (305)
T ss_pred             CCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc-ccccccc
Confidence            99655321 123456789999999999999999999999999999999999999853221  1111111122 246 467


Q ss_pred             CCCChHHHHHHHHHhhcCCC-CcccccEEE
Q 023555          236 FGTTDPALTSLVRYLVHDSS-EYVSGNIFI  264 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~~-~~i~G~~i~  264 (280)
                      ..+|+ |+++++.||+++.. .++||++|.
T Consensus       237 ~~~pe-evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        237 SETPR-YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             CCCHH-HHHHHHHHHHcCcchhhcCCcEEE
Confidence            77888 99999999999874 699999875

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-41  Score=287.88  Aligned_cols=245  Identities=27%  Similarity=0.383  Sum_probs=207.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++||||+++|||+++++.|+++|++|++++|+.++++...+++....+  .++.++.+|++ +.++++++++   
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~-~~~~~~~~~~---   77 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG--VDVAVHALDLS-SPEAREQLAA---   77 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEecCC-CHHHHHHHHH---
Confidence            57899999999999999999999999999999999999888888777765432  35778899999 6777777765   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                       .++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  +.+++..
T Consensus        78 -~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~--~~~~~~~  152 (259)
T PRK06125         78 -EAGDIDILVNNAGAI-PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGEN--PDADYIC  152 (259)
T ss_pred             -HhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccC--CCCCchH
Confidence             358999999999986 446788899999999999999999999999999998644 68999999988765  5567888


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |+++|+|+++|+++++.|+.++||+||+|+||+++|++.....         ....... .....|++++.+|+ |+++.
T Consensus       153 y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~va~~  230 (259)
T PRK06125        153 GSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQE-LLAGLPLGRPATPE-EVADL  230 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHH-HhccCCcCCCcCHH-HHHHH
Confidence            9999999999999999999999999999999999999743221         1111122 22346888999998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.||+++.+.++||+.+.+|||+++..
T Consensus       231 ~~~l~~~~~~~~~G~~i~vdgg~~~~~  257 (259)
T PRK06125        231 VAFLASPRSGYTSGTVVTVDGGISARG  257 (259)
T ss_pred             HHHHcCchhccccCceEEecCCeeecC
Confidence            999999999999999999999987643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.1e-44  Score=269.75  Aligned_cols=242  Identities=31%  Similarity=0.473  Sum_probs=212.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++.|+.+++||+..|||+++++.|++.|++|+.+.|+++.+..+.++.      ...+..+..|++ ..    +++.+.
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~------p~~I~Pi~~Dls-~w----ea~~~~   71 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET------PSLIIPIVGDLS-AW----EALFKL   71 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC------CcceeeeEeccc-HH----HHHHHh
Confidence            3689999999999999999999999999999999999999999888764      235788899998 43    333444


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      ....+++|.+|||||+. -..++.+++.++|++.|++|+++.+.+.|....-+..+..+|.||++||..+..  +..+..
T Consensus        72 l~~v~pidgLVNNAgvA-~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R--~~~nHt  148 (245)
T KOG1207|consen   72 LVPVFPIDGLVNNAGVA-TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR--PLDNHT  148 (245)
T ss_pred             hcccCchhhhhccchhh-hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc--ccCCce
Confidence            44557999999999985 557889999999999999999999999999888777777789999999998877  778889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|+|+.+++|++|.|+++++||||+|.|-.+-|+|.++-+.++......-..+|++||.+.+ |+.+++.||+|+.
T Consensus       149 vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~-eVVnA~lfLLSd~  227 (245)
T KOG1207|consen  149 VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVD-EVVNAVLFLLSDN  227 (245)
T ss_pred             EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHH-HHHhhheeeeecC
Confidence            999999999999999999999999999999999999999887665544333333448999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      +++.||..+.++|||..
T Consensus       228 ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  228 SSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             cCcccCceeeecCCccC
Confidence            99999999999999964

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-41  Score=287.69  Aligned_cols=243  Identities=26%  Similarity=0.479  Sum_probs=203.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++||||++|||+++|+.|+++|++|++++++.+...   +++.+.     .+.++.+|++ +.++++++++++.
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~-----~~~~~~~Dl~-~~~~~~~~~~~~~   74 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK-----GVFTIKCDVG-NRDQVKKSKEVVE   74 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC-----CCeEEEecCC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999999998877644322   222221     3667899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+... +.++...
T Consensus        75 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~-~~~~~~~  151 (255)
T PRK06463         75 KEFGRVDVLVNNAGIM-YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGT-AAEGTTF  151 (255)
T ss_pred             HHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCC-CCCCccH
Confidence            9999999999999985 345667789999999999999999999999999997644 689999999876531 3356788


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......   ...........|++++.+|+ |+++.+.||++
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s  230 (255)
T PRK06463        152 YAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPE-DIANIVLFLAS  230 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHH-HHHHHHHHHcC
Confidence            999999999999999999999999999999999999986432111   11222333457899999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.+.++||+++.+|||..-
T Consensus       231 ~~~~~~~G~~~~~dgg~~~  249 (255)
T PRK06463        231 DDARYITGQVIVADGGRID  249 (255)
T ss_pred             hhhcCCCCCEEEECCCeee
Confidence            9999999999999999753

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=8.9e-42  Score=282.73  Aligned_cols=225  Identities=27%  Similarity=0.367  Sum_probs=198.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..++++++||||||+|||+++|+.|+++|++|+++.|++++++++.+++.+..  ++.+..+.+|++ +.++++++.+++
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~--~v~v~vi~~DLs-~~~~~~~l~~~l   78 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT--GVEVEVIPADLS-DPEALERLEDEL   78 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh--CceEEEEECcCC-ChhHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999998876  467889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+..+.+|+||||||+. ..+++.+.++++.++++++|+.+.+.++++++|.|.+++ .|.||||+|..++.  +.|..+
T Consensus        79 ~~~~~~IdvLVNNAG~g-~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~--p~p~~a  154 (265)
T COG0300          79 KERGGPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLI--PTPYMA  154 (265)
T ss_pred             HhcCCcccEEEECCCcC-CccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcC--CCcchH
Confidence            99989999999999985 567899999999999999999999999999999999855 79999999999988  668999


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|++||+++.+|+++|+.|+.++||+|.+|+||+|.|++........      ....|...+.+|+ ++|+...+.+..
T Consensus       155 vY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~------~~~~~~~~~~~~~-~va~~~~~~l~~  226 (265)
T COG0300         155 VYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDV------YLLSPGELVLSPE-DVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccccc------ccccchhhccCHH-HHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999985211111      1112445566777 888877776653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=4e-41  Score=284.74  Aligned_cols=244  Identities=27%  Similarity=0.481  Sum_probs=211.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+..+...+++...   +.++.++.+|++ +.++++++++.+.
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~i~~~~~~~~   83 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---GGQAFACRCDIT-SEQELSALADFAL   83 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999988888877777543   236778899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||+|...+ .+. +.+.++|++.+++|+.+++.+++++.|+|.+.+ .+++|++||..+..  +.+++..
T Consensus        84 ~~~~~~d~li~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~  158 (255)
T PRK06113         84 SKLGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--KNINMTS  158 (255)
T ss_pred             HHcCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccC--CCCCcch
Confidence            999999999999997533 333 678999999999999999999999999997643 67999999988876  5677889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|+|+++|+++++.++.++||+||+|+||+++|++............ ..+..|+++++.|+ |+++++.||+++.+
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-d~a~~~~~l~~~~~  236 (255)
T PRK06113        159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK-MLQHTPIRRLGQPQ-DIANAALFLCSPAA  236 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999998765433333222 33447888999998 99999999999999


Q ss_pred             CcccccEEEeCCccc
Q 023555          256 EYVSGNIFIVDSGAT  270 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~  270 (280)
                      .+++|++|.+|||..
T Consensus       237 ~~~~G~~i~~~gg~~  251 (255)
T PRK06113        237 SWVSGQILTVSGGGV  251 (255)
T ss_pred             cCccCCEEEECCCcc
Confidence            999999999999943

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=4.8e-41  Score=284.49  Aligned_cols=251  Identities=33%  Similarity=0.497  Sum_probs=212.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+|++|||||++|||++++++|+++|++|+++++ +.+.++...+++...   +.++.++.+|++ +.++++++++++.+
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~~   76 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH---GVRAEIRQLDLS-DLPEGAQALDKLIQ   76 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---CCceEEEEccCC-CHHHHHHHHHHHHH
Confidence            3689999999999999999999999999988865 555666666666543   336888999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||+|... ...+.+.+.+++++.+++|+.+++.+++++.++|.+++.+|+||++||..+..  +.++...|
T Consensus        77 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~Y  153 (256)
T PRK12743         77 RLGRIDVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT--PLPGASAY  153 (256)
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC--CCCCcchh
Confidence            9999999999999863 35667789999999999999999999999999997655468999999988765  56788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      +++|++++.++++++.++.++||+||+|+||+++|++...... +.. .......|+++..+|+ |+++.+.||+++.+.
T Consensus       154 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~  230 (256)
T PRK12743        154 TAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS-DVK-PDSRPGIPLGRPGDTH-EIASLVAWLCSEGAS  230 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh-HHH-HHHHhcCCCCCCCCHH-HHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999998754322 221 1222347888999998 999999999999999


Q ss_pred             cccccEEEeCCcccCCCCCCCCC
Q 023555          257 YVSGNIFIVDSGATLPGLPIFSS  279 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~~~~~~~~~  279 (280)
                      +++|+++.+|||+++.. |-|.|
T Consensus       231 ~~~G~~~~~dgg~~~~~-~~~~~  252 (256)
T PRK12743        231 YTTGQSLIVDGGFMLAN-PQFNS  252 (256)
T ss_pred             CcCCcEEEECCCccccC-Ccccc
Confidence            99999999999987655 65543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-42  Score=291.91  Aligned_cols=242  Identities=31%  Similarity=0.505  Sum_probs=203.2

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .++++|++|++|||||++|||+++++.|+++|++|++++++....+            ..++.++.+|++ +.+++++++
T Consensus         2 ~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------------~~~~~~~~~D~~-~~~~~~~~~   68 (266)
T PRK06171          2 QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------------HENYQFVPTDVS-SAEEVNHTV   68 (266)
T ss_pred             cccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------------cCceEEEEccCC-CHHHHHHHH
Confidence            3456799999999999999999999999999999999999875432            125678899999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCC--------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAV--------KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      +++.+.++++|++|||||...+.        .+..+.+.++|++.+++|+.+++.+++++.++|.+++ .|+||++||..
T Consensus        69 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~  147 (266)
T PRK06171         69 AEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEA  147 (266)
T ss_pred             HHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEcccc
Confidence            99999999999999999975321        1234678999999999999999999999999998644 68999999988


Q ss_pred             cccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCccc-CccccCccc----------hhhhhhhhhc--C
Q 023555          164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK-SEITEGLMK----------KDWLNNVASR--T  230 (280)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~-t~~~~~~~~----------~~~~~~~~~~--~  230 (280)
                      +..  +.++...|+++|+++++|+++++.+++++||+||+|+||+++ |++......          .....+....  .
T Consensus       148 ~~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (266)
T PRK06171        148 GLE--GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTST  225 (266)
T ss_pred             ccC--CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccc
Confidence            766  557889999999999999999999999999999999999997 555321110          1111122222  4


Q ss_pred             CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          231 YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       231 ~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      .|++|+++|+ |+|+++.||+++.++++||++|.+|||+.
T Consensus       226 ~p~~r~~~~~-eva~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        226 IPLGRSGKLS-EVADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             ccCCCCCCHH-HhhhheeeeeccccccceeeEEEecCccc
Confidence            7999999999 99999999999999999999999999975

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-41  Score=283.61  Aligned_cols=244  Identities=30%  Similarity=0.463  Sum_probs=203.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|++. .++..+++...   +.++.++.+|++ +.++++++++++
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   78 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA---GGEALALTADLE-TYAGAQAAMAAA   78 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc---CCeEEEEEEeCC-CHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999853 44455555432   236778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|+||++||..+..    ++..
T Consensus        79 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~----~~~~  153 (260)
T PRK12823         79 VEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG----INRV  153 (260)
T ss_pred             HHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC----CCCC
Confidence            999999999999999653345777889999999999999999999999999998754 68999999986542    3456


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc------cc--hhh---hhhhhhcCCCCCCCCCChHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL------MK--KDW---LNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~------~~--~~~---~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      .|++||+|++.|+++++.+++++||+||+|+||+++|++....      ..  ..+   .........|+++++.|+ |+
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dv  232 (260)
T PRK12823        154 PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTID-EQ  232 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHH-HH
Confidence            8999999999999999999999999999999999999863210      00  011   111122346899999999 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      ++++.||+++.+.+++|+.+.+|||.
T Consensus       233 a~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        233 VAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHHcCcccccccCcEEeecCCC
Confidence            99999999999999999999999985

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-41  Score=313.29  Aligned_cols=245  Identities=28%  Similarity=0.490  Sum_probs=212.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ...+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.      .+...+.+|++ +.++++++++++.
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~-~~~~~~~~~~~~~  338 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG------DEHLSVQADIT-DEAAVESAFAQIQ  338 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEccCC-CHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999888877665542      25667899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|.  + .|+||++||..+..  +.+++..
T Consensus       339 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~-~g~iv~isS~~~~~--~~~~~~~  413 (520)
T PRK06484        339 ARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--Q-GGVIVNLGSIASLL--ALPPRNA  413 (520)
T ss_pred             HHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--c-CCEEEEECchhhcC--CCCCCch
Confidence            99999999999999864445677889999999999999999999999999993  2 58999999998876  6688899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      |++||+++++|+++++.+++++||+||+|+||+++|++....... ....+...+..|++++.+|+ |+|+.+.||+++.
T Consensus       414 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dia~~~~~l~s~~  492 (520)
T PRK06484        414 YCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPE-EVAEAIAFLASPA  492 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999987543211 11112233447899999998 9999999999999


Q ss_pred             CCcccccEEEeCCcccCCC
Q 023555          255 SEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.++||+++.+|||+....
T Consensus       493 ~~~~~G~~i~vdgg~~~~~  511 (520)
T PRK06484        493 ASYVNGATLTVDGGWTAFG  511 (520)
T ss_pred             ccCccCcEEEECCCccCCC
Confidence            9999999999999986543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8e-41  Score=284.51  Aligned_cols=251  Identities=27%  Similarity=0.408  Sum_probs=216.7

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.+++++|+++||||+++||++++++|+++|++|++++|+.+++++..+.+...   +.++.++.+|++ +.++++++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~   79 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL---GIEAHGYVCDVT-DEDGVQAMVS   79 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHHH
Confidence            345789999999999999999999999999999999999998888877777543   236888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||+|... ..++.+.+.+++++++++|+.+++.++++++|+|.+.+ .++||++||..+..  +.++
T Consensus        80 ~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  155 (265)
T PRK07097         80 QIEKEVGVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSEL--GRET  155 (265)
T ss_pred             HHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccC--CCCC
Confidence            99999999999999999864 35677889999999999999999999999999998744 78999999987765  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------hhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------KDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      +..|+++|++++.++++++.++.++||+||+|+||+++|++......      .....+......|.+++..|+ |+++.
T Consensus       156 ~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  234 (265)
T PRK07097        156 VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPE-DLAGP  234 (265)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHH-HHHHH
Confidence            88999999999999999999999999999999999999998654321      111222233346788899998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.||+++.+++++|+++.+|||....
T Consensus       235 ~~~l~~~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        235 AVFLASDASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             HHHHhCcccCCCCCCEEEECCCceec
Confidence            99999998999999999999997654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.1e-41  Score=281.97  Aligned_cols=245  Identities=28%  Similarity=0.418  Sum_probs=204.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +++++|++|||||++|||+++++.|+++|++|+++++ +.+..+.+..++    +  .++.++.+|++ +.+++++++++
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~--~~~~~~~~D~~-~~~~~~~~~~~   73 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----G--DRAIALQADVT-DREQVQAMFAT   73 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----C--CceEEEEcCCC-CHHHHHHHHHH
Confidence            3578999999999999999999999999999988765 455554444333    1  36778899999 78999999999


Q ss_pred             HHHHcCC-ccEEEECCCCCC-----CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           94 AWEAFGR-IDALVNNAGVSG-----AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        94 ~~~~~g~-id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      +.+.++. +|++|||||...     ...++.+.+.+++++.+++|+.+++.++++++|.|.+.+ .|+||++||..... 
T Consensus        74 ~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~-  151 (253)
T PRK08642         74 ATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQN-  151 (253)
T ss_pred             HHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccC-
Confidence            9888887 999999998631     123566789999999999999999999999999997644 68999999976544 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                       +.+++..|++||+|++.|+++++++++++||+||+|+||+++|+.......+.... ......|++++.+|+ |+++.+
T Consensus       152 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~va~~~  228 (253)
T PRK08642        152 -PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFD-LIAATTPLRKVTTPQ-EFADAV  228 (253)
T ss_pred             -CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHH-HHHhcCCcCCCCCHH-HHHHHH
Confidence             44567899999999999999999999999999999999999998654433333322 333457899999999 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .||+++.+.+++|+.+.+|||+..
T Consensus       229 ~~l~~~~~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        229 LFFASPWARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             HHHcCchhcCccCCEEEeCCCeec
Confidence            999999999999999999999754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-41  Score=282.80  Aligned_cols=199  Identities=35%  Similarity=0.491  Sum_probs=183.3

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .++.++.||+|+|||||+|||.++|+.|+++|++++++.|...+++...+++.+..+.. ++..+++|++ +.+++++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs-~~~~~~~~~   82 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVS-DEESVKKFV   82 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccC-CHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999989998877655 7999999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++...||++|+||||||+.. .......+.+++...|++|++|++.++|+++|+|++++ .|+||++||+.+..  +.|
T Consensus        83 ~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~--~~P  158 (282)
T KOG1205|consen   83 EWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM--PLP  158 (282)
T ss_pred             HHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc--CCC
Confidence            999999999999999999975 66778889999999999999999999999999999876 79999999999988  778


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCC--eEEEEeecCcccCccccCc
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHK--IRVNSICPGLFKSEITEGL  217 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~g--i~vn~v~pG~v~t~~~~~~  217 (280)
                      ....|++||.|+.+|.++|+.|+.+.+  |++ +|+||+|+|++....
T Consensus       159 ~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  159 FRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             cccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            888999999999999999999999877  666 999999999976543

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-41  Score=287.12  Aligned_cols=233  Identities=24%  Similarity=0.377  Sum_probs=194.4

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.++++++++++ +.+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-d~~~i~~~~~~~-~~~   74 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA---GFDVSTQEVDVS-SRESVKALAATA-QTL   74 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEeecC-CHHHHHHHHHHH-Hhc
Confidence            689999998 699999999996 8999999999988887777777542   236788999999 789999999988 568


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------  169 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------  169 (280)
                      +++|++|||||...        ..++|++.+++|+.+++.+++++.|+|.+   .|++|+++|..+.....         
T Consensus        75 g~id~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~~  143 (275)
T PRK06940         75 GPVTGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERAL  143 (275)
T ss_pred             CCCCEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhccc
Confidence            99999999999741        23678999999999999999999999964   36889999987654210         


Q ss_pred             ---------------C----CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---hhhhhhhh
Q 023555          170 ---------------L----PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVA  227 (280)
Q Consensus       170 ---------------~----~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---~~~~~~~~  227 (280)
                                     .    +++..|++||+|++.++++++.+++++||+||+|+||+++|++......   .+......
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  223 (275)
T PRK06940        144 ATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMF  223 (275)
T ss_pred             cccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHh
Confidence                           0    2467899999999999999999999999999999999999998643221   12222232


Q ss_pred             hcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          228 SRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       228 ~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                       ...|++++++|+ |+|+.+.||+++.++++||+++.+|||++.
T Consensus       224 -~~~p~~r~~~pe-eia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        224 -AKSPAGRPGTPD-EIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             -hhCCcccCCCHH-HHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence             347999999999 999999999999999999999999999754

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=281.33  Aligned_cols=248  Identities=38%  Similarity=0.559  Sum_probs=214.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ...++++|+++||||+++||+++++.|+++|++|++++|+.++++++..++....   .++.++.+|++ +.++++++++
T Consensus         3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~-~~~~~~~~~~   78 (258)
T PRK06949          3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG---GAAHVVSLDVT-DYQSIKAAVA   78 (258)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCC-CHHHHHHHHH
Confidence            3456899999999999999999999999999999999999988888777765432   35778999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-------CCeEEEEeccccc
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-------EGSVINISSIAAT  165 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~vv~vsS~~~~  165 (280)
                      ++.+.++++|++|||+|.. ...++.+.+.++++.++++|+.+++.+++++++.|.+...       .+++|++||..+.
T Consensus        79 ~~~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  157 (258)
T PRK06949         79 HAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL  157 (258)
T ss_pred             HHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence            9999999999999999975 3356667788999999999999999999999999976532       4799999998876


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      .  +.++...|+++|++++.++++++.+++++||+|++|+||+++|++....+..+.. .......|.++++.|+ |+++
T Consensus       158 ~--~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~p~-~~~~  233 (258)
T PRK06949        158 R--VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQG-QKLVSMLPRKRVGKPE-DLDG  233 (258)
T ss_pred             C--CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHH-HHHHhcCCCCCCcCHH-HHHH
Confidence            5  5577889999999999999999999999999999999999999987654333222 2233447889999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcc
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      .+.||+++.+++++|++|.+|||+
T Consensus       234 ~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        234 LLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             HHHHHhChhhcCCCCcEEEeCCCC
Confidence            999999999999999999999997

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-41  Score=284.23  Aligned_cols=243  Identities=26%  Similarity=0.405  Sum_probs=204.3

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +..+++||++|||||++|||++++++|+++|++|++++|+.+..      .      ..++.++.+|++ +.++++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~------~~~~~~~~~D~~-~~~~~~~~~~   69 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L------PEGVEFVAADLT-TAEGCAAVAR   69 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c------CCceeEEecCCC-CHHHHHHHHH
Confidence            44579999999999999999999999999999999999986431      1      125778999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      ++.+.++++|++|||||... ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~--~~~  146 (260)
T PRK06523         70 AVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRL--PLP  146 (260)
T ss_pred             HHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccC--CCC
Confidence            99999999999999999643 234566789999999999999999999999999998754 68999999988765  333


Q ss_pred             -CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhh--hhcCCCCCCCCC
Q 023555          172 -GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNV--ASRTYPLRDFGT  238 (280)
Q Consensus       172 -~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~--~~~~~p~~~~~~  238 (280)
                       ++..|+++|++++.|+++++.+++++||+||+|+||+++|++......          .+.....  .....|++++..
T Consensus       147 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  226 (260)
T PRK06523        147 ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAE  226 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCC
Confidence             678999999999999999999999999999999999999998643211          0100010  012368999999


Q ss_pred             ChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       239 ~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+ |+++.+.||+++.++++||+.+.+|||+.++
T Consensus       227 ~~-~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        227 PE-EVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HH-HHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            98 9999999999999999999999999997654

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-40  Score=283.67  Aligned_cols=249  Identities=25%  Similarity=0.404  Sum_probs=212.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+..   .+.++.++.+|++ +.++++++++
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~-~~~~~~~~~~  116 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK---EGVKCLLIPGDVS-DEAFCKDAVE  116 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh---cCCeEEEEEccCC-CHHHHHHHHH
Confidence            56899999999999999999999999999999999999854 34444444432   2346788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||||......++.+.+.++|.+.+++|+.+++.+++++++.|++   .+++|++||..+..  +.++
T Consensus       117 ~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~--~~~~  191 (290)
T PRK06701        117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYE--GNET  191 (290)
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccC--CCCC
Confidence            999999999999999997644456778899999999999999999999999999954   47999999988776  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|++||+|++.++++++.++.++||+|++|+||+++|++............. ....|++++..|+ |++++++||++
T Consensus       192 ~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dva~~~~~ll~  269 (290)
T PRK06701        192 LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQF-GSNTPMQRPGQPE-ELAPAYVFLAS  269 (290)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHH-HhcCCcCCCcCHH-HHHHHHHHHcC
Confidence            889999999999999999999999999999999999999986543322222222 3446889999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCCC
Q 023555          253 DSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.+.+++|+++.+|||+...|
T Consensus       270 ~~~~~~~G~~i~idgg~~~~~  290 (290)
T PRK06701        270 PDSSYITGQMLHVNGGVIVNG  290 (290)
T ss_pred             cccCCccCcEEEeCCCcccCC
Confidence            999999999999999987654

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-40  Score=279.61  Aligned_cols=247  Identities=31%  Similarity=0.467  Sum_probs=212.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++|+++||||++|||+++++.|+++|++|++++|+++.+++..+++...   +.++.++.+|++ +.++++++++++.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   77 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL---GRRALAVPTDIT-DEDQCANLVALAL   77 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh---CCceEEEecCCC-CHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888877777543   236788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||||...+..++.+.+.+++++.+++|+.+++.+++++.+.|.+.  +++||++||..+..  +.+++..
T Consensus        78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~--~~~~~~~  153 (258)
T PRK07890         78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRH--SQPKYGA  153 (258)
T ss_pred             HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhcc--CCCCcch
Confidence            9999999999999986555667788999999999999999999999999999764  47999999988765  6678899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |+++|++++.++++++.+++++||++|+|+||++.|++.....         ..+..........|++++.+|+ |++++
T Consensus       154 Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~a  232 (258)
T PRK07890        154 YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDD-EVASA  232 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHH-HHHHH
Confidence            9999999999999999999999999999999999998754321         1122222223346888888998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++...+++|+++.+|||..+
T Consensus       233 ~~~l~~~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        233 VLFLASDLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             HHHHcCHhhhCccCcEEEeCCcccc
Confidence            9999998888999999999999865

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-40  Score=280.46  Aligned_cols=252  Identities=27%  Similarity=0.428  Sum_probs=212.4

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.++...+++....   .++.++.+|++ +.+++++++++
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~-~~~~i~~~~~~   79 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG---PEGLGVSADVR-DYAAVEAAFAQ   79 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---CceEEEECCCC-CHHHHHHHHHH
Confidence            457899999999999999999999999999999999999888777766665432   25678899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|+++  +|+||++||..+..  +.+++
T Consensus        80 ~~~~~~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~--~~~~~  154 (264)
T PRK07576         80 IADEFGPIDVLVSGAAGN-FPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFV--PMPMQ  154 (264)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhcc--CCCCc
Confidence            999999999999999865 33566788999999999999999999999999999753  48999999987765  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCccc-CccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK-SEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ..|+++|++++.|+++++.++.++||+|++|+||+++ |+......+............|+++...|+ |+++.+.||++
T Consensus       155 ~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~  233 (264)
T PRK07576        155 AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQ-DIANAALFLAS  233 (264)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            9999999999999999999999999999999999997 553332222222222222346888888888 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCCCCC
Q 023555          253 DSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +...+++|+.+.+|||+.+-+.+
T Consensus       234 ~~~~~~~G~~~~~~gg~~~~~~~  256 (264)
T PRK07576        234 DMASYITGVVLPVDGGWSLGGAS  256 (264)
T ss_pred             hhhcCccCCEEEECCCcccCchH
Confidence            88899999999999999765543

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.5e-40  Score=278.37  Aligned_cols=245  Identities=30%  Similarity=0.491  Sum_probs=207.8

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .|..+++||+++||||+++||+++|+.|+++|++|++++|+.++.++..+++      +.++.++.+|++ +.+++++++
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-~~~~~~~~~   75 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL------GENAWFIAMDVA-DEAQVAAGV   75 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc------CCceEEEEccCC-CHHHHHHHH
Confidence            3555789999999999999999999999999999999999877666554433      125778899999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +++.+.++++|++|||||...+. .++.+.+.++|++.+++|+.+++.+++++.|+|.+.  .|+||++||..+..  +.
T Consensus        76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~--~~  151 (255)
T PRK05717         76 AEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQ--SE  151 (255)
T ss_pred             HHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcC--CC
Confidence            99999999999999999986432 456678999999999999999999999999999763  48999999988766  55


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|+++|+|++.++++++.+++.. |+||+|+||+++|++.......+. ........|.+++..|+ |++..+.||
T Consensus       152 ~~~~~Y~~sKaa~~~~~~~la~~~~~~-i~v~~i~Pg~i~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~va~~~~~l  228 (255)
T PRK05717        152 PDTEAYAASKGGLLALTHALAISLGPE-IRVNAVSPGWIDARDPSQRRAEPL-SEADHAQHPAGRVGTVE-DVAAMVAWL  228 (255)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhcCC-CEEEEEecccCcCCccccccchHH-HHHHhhcCCCCCCcCHH-HHHHHHHHH
Confidence            788899999999999999999999874 999999999999987543222222 12222346889999998 999999999


Q ss_pred             hcCCCCcccccEEEeCCccc
Q 023555          251 VHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +++...+++|+.+.+|||++
T Consensus       229 ~~~~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        229 LSRQAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             cCchhcCccCcEEEECCCce
Confidence            99888899999999999975

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.7e-40  Score=275.10  Aligned_cols=233  Identities=22%  Similarity=0.311  Sum_probs=193.9

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||++|||++++++|+++|++|++++|+++...   +.+.+.     .+.++.+|++ +.++++++++++.+.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~-----~~~~~~~D~~-~~~~~~~~~~~~~~~~   72 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA-----GAQCIQADFS-TNAGIMAFIDELKQHT   72 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc-----CCEEEEcCCC-CHHHHHHHHHHHHhhC
Confidence            689999999999999999999999999999999876433   223221     2467899999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEeccccccCCCCCCCCCCh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      +++|++|||||.... ..+.+.+.++|++.+++|+.+++.++++++|.|++.+ +.|+||++||..+..  +.+++..|+
T Consensus        73 ~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~~Y~  149 (236)
T PRK06483         73 DGLRAIIHNASDWLA-EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK--GSDKHIAYA  149 (236)
T ss_pred             CCccEEEECCccccC-CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc--CCCCCccHH
Confidence            999999999997533 3455778999999999999999999999999997643 147999999987765  557889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      +||+++++|+++++.++++ +||||+|+||++.|+...   .+....... ...|+++...|+ |+++.+.||++  +.+
T Consensus       150 asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~-~va~~~~~l~~--~~~  221 (236)
T PRK06483        150 ASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD---DAAYRQKAL-AKSLLKIEPGEE-EIIDLVDYLLT--SCY  221 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC---CHHHHHHHh-ccCccccCCCHH-HHHHHHHHHhc--CCC
Confidence            9999999999999999988 599999999999875421   111112222 336888989998 99999999997  579


Q ss_pred             ccccEEEeCCcccC
Q 023555          258 VSGNIFIVDSGATL  271 (280)
Q Consensus       258 i~G~~i~vdgG~~~  271 (280)
                      +||+++.+|||+++
T Consensus       222 ~~G~~i~vdgg~~~  235 (236)
T PRK06483        222 VTGRSLPVDGGRHL  235 (236)
T ss_pred             cCCcEEEeCccccc
Confidence            99999999999876

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-39  Score=274.73  Aligned_cols=247  Identities=31%  Similarity=0.453  Sum_probs=213.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+.+...   +.++.++.+|++ +.++++++++++.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   82 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA---GRRAHVVAADLA-HPEATAGLAGQAV   82 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999988888777777542   236778899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||||... ...+.+.+.+++++++++|+.+++.+.+++.++|.+..+.|++|++||..+..  +.++...
T Consensus        83 ~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  159 (263)
T PRK07814         83 EAFGRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL--AGRGFAA  159 (263)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC--CCCCCch
Confidence            99999999999999753 35667789999999999999999999999999998755578999999988766  5678899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|++++.++++++.++.+ +|+||+|+||++.|++..................|..+..+|+ |+++.+.|++++..
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~  237 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPE-DIAAAAVYLASPAG  237 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            999999999999999999987 6999999999999997654332222333333346788888888 99999999999989


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .+++|+.+.+|||...
T Consensus       238 ~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        238 SYLTGKTLEVDGGLTF  253 (263)
T ss_pred             cCcCCCEEEECCCccC
Confidence            9999999999999776

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-39  Score=275.24  Aligned_cols=247  Identities=24%  Similarity=0.362  Sum_probs=209.4

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||+++||++++++|+++|++|++++|+.+.++...+++....+ ..++.++.+|++ +.++++++++++.+.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG-EGMAYGFGADAT-SEQSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CceeEEEEccCC-CHHHHHHHHHHHHHHc
Confidence            78999999999999999999999999999999998888877777665432 135788999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+++..+++|++||..+..  +.+....|++
T Consensus        80 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~--~~~~~~~Y~~  156 (259)
T PRK12384         80 GRVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV--GSKHNSGYSA  156 (259)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc--CCCCCchhHH
Confidence            99999999999763 35677889999999999999999999999999998754357999999987655  4567789999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcc-cCccccCccc---------hhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLF-KSEITEGLMK---------KDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v-~t~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      ||+|++.++++++.+++++||+||+|+||.+ .|++.....+         .+...+......|++++..|+ |+++++.
T Consensus       157 sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dv~~~~~  235 (259)
T PRK12384        157 AKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQ-DVLNMLL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHH-HHHHHHH
Confidence            9999999999999999999999999999974 6666443221         122222233457899999998 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||++..+.+++|+++.+|||..+
T Consensus       236 ~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        236 FYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             HHcCcccccccCceEEEcCCEEe
Confidence            99998888999999999999865

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2e-39  Score=271.26  Aligned_cols=234  Identities=23%  Similarity=0.394  Sum_probs=192.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||+++++.|+++|++|+++++ +.+..+++.+++        ...++.+|++ +.+++.++++ 
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~--------~~~~~~~D~~-~~~~~~~~~~-   71 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET--------GATAVQTDSA-DRDAVIDVVR-   71 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh--------CCeEEecCCC-CHHHHHHHHH-
Confidence            3588999999999999999999999999999988876 444554443332        2346789998 6666665554 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                         .++++|++|||+|... ..+..+.+.++|++.+++|+.+++.++++++++|.+   .|++|++||..+.. .+.++.
T Consensus        72 ---~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~-~~~~~~  143 (237)
T PRK12742         72 ---KSGALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDR-MPVAGM  143 (237)
T ss_pred             ---HhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEecccccc-CCCCCC
Confidence               4578999999999763 345667889999999999999999999999999954   57999999987632 245778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|+++|++++.++++++.+++++||+||+|+||+++|++.....  +. .+......|++++.+|+ |+++.+.||+++
T Consensus       144 ~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~-~~~~~~~~~~~~~~~p~-~~a~~~~~l~s~  219 (237)
T PRK12742        144 AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--PM-KDMMHSFMAIKRHGRPE-EVAGMVAWLAGP  219 (237)
T ss_pred             cchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--HH-HHHHHhcCCCCCCCCHH-HHHHHHHHHcCc
Confidence            899999999999999999999999999999999999999865322  11 22233346889999998 999999999999


Q ss_pred             CCCcccccEEEeCCccc
Q 023555          254 SSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~  270 (280)
                      .+.++||+++.+|||+.
T Consensus       220 ~~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        220 EASFVTGAMHTIDGAFG  236 (237)
T ss_pred             ccCcccCCEEEeCCCcC
Confidence            99999999999999975

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-39  Score=272.51  Aligned_cols=247  Identities=27%  Similarity=0.430  Sum_probs=211.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEE-EecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      |.+|+++||||+++||+++++.|+++|++|++ ..|+.+..+++.+++.+..   .++.++.+|++ +.+++.++++++.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~~~~   77 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG---RKALAVKANVG-DVEKIKEMFAQID   77 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCC-CHHHHHHHHHHHH
Confidence            67899999999999999999999999999876 5788877777777776532   36788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||+|.. ...+..+.+.+++++.+++|+.+++.+++++.++|.+++ .|+||++||..+..  +.++...
T Consensus        78 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~~~~  153 (250)
T PRK08063         78 EEFGRLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIR--YLENYTT  153 (250)
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcc--CCCCccH
Confidence            9999999999999975 445677889999999999999999999999999997654 68999999987655  5567889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|++++.|+++++.++.+.||++|+|+||+++|++..................|.++..+++ |+++.+.+++++..
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~~~  232 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPE-DVANAVLFLCSPEA  232 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHH-HHHHHHHHHcCchh
Confidence            99999999999999999999999999999999999998654433222222233346777888888 99999999999888


Q ss_pred             CcccccEEEeCCcccCC
Q 023555          256 EYVSGNIFIVDSGATLP  272 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~  272 (280)
                      .+++|+.+.+|||.++.
T Consensus       233 ~~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        233 DMIRGQTIIVDGGRSLL  249 (250)
T ss_pred             cCccCCEEEECCCeeee
Confidence            89999999999998763

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=272.62  Aligned_cols=242  Identities=30%  Similarity=0.447  Sum_probs=204.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++      +.++.++.+|++ +.++++.+++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~~~~   74 (249)
T PRK06500          2 SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL------GESALVIRADAG-DVAAQKALAQAL   74 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh------CCceEEEEecCC-CHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987766655544      235778899999 788999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. ...++.+.+.+++++.+++|+.+++.++++++|+|.+   .+++|+++|..+..  +.+...
T Consensus        75 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~--~~~~~~  148 (249)
T PRK06500         75 AEAFGRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHI--GMPNSS  148 (249)
T ss_pred             HHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhcc--CCCCcc
Confidence            99999999999999976 3345667899999999999999999999999999954   47899999877665  557888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-ch---hhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KK---DWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~---~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      .|+++|++++.++++++.+++++||++++++||.++|++..... ..   ....+......|+.++..|+ |+++++.||
T Consensus       149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l  227 (249)
T PRK06500        149 VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPE-EIAKAVLYL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            99999999999999999999999999999999999999764321 11   11112223346888888898 999999999


Q ss_pred             hcCCCCcccccEEEeCCccc
Q 023555          251 VHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +++...+++|+.+.+|||.+
T Consensus       228 ~~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        228 ASDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             cCccccCccCCeEEECCCcc
Confidence            99888999999999999964

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-39  Score=270.41  Aligned_cols=247  Identities=30%  Similarity=0.472  Sum_probs=214.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|+++||||+++||+++++.|+++|++|++++|++++++...+++.+.   ..++.++.+|++ +.++++++++++
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~   78 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA---GGRAHAIAADLA-DPASVQRFFDAA   78 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888877777543   236888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|.... .+..+.+.+++++.++.|+.+++.+++++.++|.+.+ .|++|++||..+..  +.+...
T Consensus        79 ~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  154 (250)
T PRK12939         79 AAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALW--GAPKLG  154 (250)
T ss_pred             HHHcCCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhcc--CCCCcc
Confidence            9999999999999998633 5667788999999999999999999999999997744 68999999987765  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.+++.++.++++++|++++|+||+++|++........+... .....|+.++..|+ |+++.+.+++++.
T Consensus       155 ~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~~~  232 (250)
T PRK12939        155 AYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAY-YLKGRALERLQVPD-DVAGAVLFLLSDA  232 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHH-HHhcCCCCCCCCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998765433222222 23346888889998 9999999999988


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      .++++|+.|.+|||+.+
T Consensus       233 ~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        233 ARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             ccCccCcEEEECCCccc
Confidence            88999999999999876

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.5e-39  Score=270.67  Aligned_cols=244  Identities=28%  Similarity=0.478  Sum_probs=206.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      |++|+++||||++|||+++|++|+++|++|++. .++....++..+++...   +.++....+|++ +.++++++++++.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   76 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL---GFDFIASEGNVG-DWDSTKAAFDKVK   76 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999998875 44555555555555432   336778899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+.+ .++||++||..+..  +.+++..
T Consensus        77 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~  152 (246)
T PRK12938         77 AEVGEIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK--GQFGQTN  152 (246)
T ss_pred             HHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccC--CCCCChh
Confidence            99999999999999863 34677889999999999999999999999999997643 68999999987765  5578889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|++++.|+++++.++.++||++|+|+||+++|++..... +..... .....|..++.+|+ ++++.+.||+++.+
T Consensus       153 y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~~~~~~-~~~~~~~~~~~~~~-~v~~~~~~l~~~~~  229 (246)
T PRK12938        153 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-PDVLEK-IVATIPVRRLGSPD-EIGSIVAWLASEES  229 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-hHHHHH-HHhcCCccCCcCHH-HHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999999876432 222222 22336888888898 99999999999999


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .+++|+.+.+|||+++
T Consensus       230 ~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        230 GFSTGADFSLNGGLHM  245 (246)
T ss_pred             CCccCcEEEECCcccC
Confidence            9999999999999754

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=4.9e-39  Score=271.63  Aligned_cols=244  Identities=30%  Similarity=0.464  Sum_probs=211.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+++||||+++||++++++|+++|++|++++|+.+.+++..+++...   +.++.++.+|++ +.+++.++++++.+.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~i~~~~~~~~~~~~   76 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA---GGKAVAYKLDVS-DKDQVFSAIDQAAEKFG   76 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEcCCC-CHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999988887777777542   336788999999 78999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++++.|++.+.++++|++||..+..  +.+.+..|+++
T Consensus        77 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~s  153 (254)
T TIGR02415        77 GFDVMVNNAGVA-PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE--GNPILSAYSST  153 (254)
T ss_pred             CCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC--CCCCCcchHHH
Confidence            999999999985 445777889999999999999999999999999998765568999999988766  56788999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---------hhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      |++++.|++.++.++++.||+|++|+||+++|++.......         .+.........|++++.+|+ |+++++.||
T Consensus       154 K~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l  232 (254)
T TIGR02415       154 KFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPE-DVAGLVSFL  232 (254)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHH-HHHHHHHhh
Confidence            99999999999999999999999999999999986543211         01111222347889999998 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++...+++|+++.+|||+++
T Consensus       233 ~~~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       233 ASEDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             cccccCCccCcEEEecCCccC
Confidence            999999999999999999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.4e-39  Score=270.71  Aligned_cols=246  Identities=33%  Similarity=0.528  Sum_probs=214.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.++.+.....+..    +.++.++.+|++ +.++++++++++.
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~-~~~~~~~~~~~~~   76 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA----GGRAIAVAADVS-DEADVEAAVAAAL   76 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEECCCC-CHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999888777776643    236788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||+|......++.+.+.+++++.+++|+.+++.+++.+++.|.+++ .+++|++||..+..  +.++...
T Consensus        77 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  153 (251)
T PRK07231         77 ERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLR--PRPGLGW  153 (251)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcC--CCCCchH
Confidence            99999999999999865555677889999999999999999999999999997644 68999999988776  6678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      |+.+|++++.+++.++.+++++||++++++||+++|++.......   ..... .....|.+++..|+ |++..+.+|++
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~  231 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAK-FLATIPLGRLGTPE-DIANAALFLAS  231 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHH-HhcCCCCCCCcCHH-HHHHHHHHHhC
Confidence            999999999999999999999899999999999999986654321   22222 23346888888998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +...+++|+++.+|||..+
T Consensus       232 ~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        232 DEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             ccccCCCCCeEEECCCccC
Confidence            8888999999999999765

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-39  Score=267.51  Aligned_cols=223  Identities=20%  Similarity=0.269  Sum_probs=190.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..   .++..+.+|++ +.++++++++++.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~---~~~~~~~~D~~-~~~~~~~~~~~~~   77 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT---DNVYSFQLKDF-SQESIRHLFDAIE   77 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CCeEEEEccCC-CHHHHHHHHHHHH
Confidence            6889999999999999999999999999999999999999988888776532   35778899999 7899999999999


Q ss_pred             HHcC-CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           96 EAFG-RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      +.++ ++|++|||+|......++.+.+.++|.+.+++|+.+++.++++++|+|.+++++|+||++||..+     .+++.
T Consensus        78 ~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~-----~~~~~  152 (227)
T PRK08862         78 QQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD-----HQDLT  152 (227)
T ss_pred             HHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC-----CCCcc
Confidence            9998 99999999986545557788899999999999999999999999999987554689999999653     24678


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|+|+.+|+++++.|++++||+||+|+||+++|+...   .++...+             .++|++.+..||++  
T Consensus       153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~---~~~~~~~-------------~~~~~~~~~~~l~~--  214 (227)
T PRK08862        153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL---DAVHWAE-------------IQDELIRNTEYIVA--  214 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc---CHHHHHH-------------HHHHHHhheeEEEe--
Confidence            89999999999999999999999999999999999998321   1111111             11489999999997  


Q ss_pred             CCcccccEEEe
Q 023555          255 SEYVSGNIFIV  265 (280)
Q Consensus       255 ~~~i~G~~i~v  265 (280)
                      +.++||+.+..
T Consensus       215 ~~~~tg~~~~~  225 (227)
T PRK08862        215 NEYFSGRVVEA  225 (227)
T ss_pred             cccccceEEee
Confidence            66999988753

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.7e-39  Score=270.91  Aligned_cols=239  Identities=27%  Similarity=0.445  Sum_probs=205.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||+++||++++++|+++|++|++++|+.         +..   ...++.++.+|++ +.++++++++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~---~~~~~~~~~~D~~-~~~~~~~~~~~~   70 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ---EDYPFATFVLDVS-DAAAVAQVCQRL   70 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh---cCCceEEEEecCC-CHHHHHHHHHHH
Confidence            468999999999999999999999999999999999986         111   1236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++++.+.|++++ .|+||++||..+..  +.++..
T Consensus        71 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~--~~~~~~  146 (252)
T PRK08220         71 LAETGPLDVLVNAAGIL-RMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHV--PRIGMA  146 (252)
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhcc--CCCCCc
Confidence            99999999999999986 345677889999999999999999999999999998644 68999999987765  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhh--------hhhhhhcCCCCCCCCCChHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDW--------LNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~--------~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      .|+++|++++.|+++++.+++++||+||++.||+++|++.......+.        ..+......|.+++..|+ |+|++
T Consensus       147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  225 (252)
T PRK08220        147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQ-EIANA  225 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHH-HHHHH
Confidence            999999999999999999999999999999999999998654322111        011223346888999998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++...+++|+++.+|||+++
T Consensus       226 ~~~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        226 VLFLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             HHHHhcchhcCccCcEEEECCCeec
Confidence            9999999999999999999999876

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-39  Score=269.52  Aligned_cols=233  Identities=29%  Similarity=0.469  Sum_probs=195.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+.....            ..++..+.+|++ +.      ++++.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~------------~~~~~~~~~D~~-~~------~~~~~   62 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL------------SGNFHFLQLDLS-DD------LEPLF   62 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc------------CCcEEEEECChH-HH------HHHHH
Confidence            588999999999999999999999999999999999753210            125778899998 43      55566


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||+|......++.+.+.+++++.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.++...
T Consensus        63 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  139 (235)
T PRK06550         63 DWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFV--AGGGGAA  139 (235)
T ss_pred             HhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc--CCCCCcc
Confidence            67789999999999754335667889999999999999999999999999997654 68999999988766  5577889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|++++.++++++.++.++||+||+|+||+++|++......+...........|++++.+|+ |+|+.+.||+++.+
T Consensus       140 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~s~~~  218 (235)
T PRK06550        140 YTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPE-EVAELTLFLASGKA  218 (235)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHH-HHHHHHHHHcChhh
Confidence            99999999999999999999999999999999999998653222222222233447899999998 99999999999989


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .+++|+++.+|||+.+
T Consensus       219 ~~~~g~~~~~~gg~~~  234 (235)
T PRK06550        219 DYMQGTIVPIDGGWTL  234 (235)
T ss_pred             ccCCCcEEEECCceec
Confidence            9999999999999865

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.3e-39  Score=298.58  Aligned_cols=250  Identities=33%  Similarity=0.554  Sum_probs=213.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.      .++.++.+|++ +.++++++++++.
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~-~~~~~~~~~~~~~   74 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG------PDHHALAMDVS-DEAQIREGFEQLH   74 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEeccC-CHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999888877666552      25678899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      +.++++|+||||||...+ ..++.+.+.++|++++++|+.+++.++++++|+|.+++.+++||++||..+..  +.+++.
T Consensus        75 ~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~--~~~~~~  152 (520)
T PRK06484         75 REFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV--ALPKRT  152 (520)
T ss_pred             HHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC--CCCCCc
Confidence            999999999999997432 24667889999999999999999999999999997755445999999988876  567889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-hhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|+++|+|+++|+++++.|+.++||+|++|+||+++|++........ ..........|.+++.+|+ ++++.+.||+++
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~v~~l~~~  231 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPE-EIAEAVFFLASD  231 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999875432211 1112222346788888898 999999999999


Q ss_pred             CCCcccccEEEeCCcccCCCCC
Q 023555          254 SSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      ..++++|+++.+|||++..+.+
T Consensus       232 ~~~~~~G~~~~~~gg~~~~~~~  253 (520)
T PRK06484        232 QASYITGSTLVVDGGWTVYGGS  253 (520)
T ss_pred             cccCccCceEEecCCeeccccc
Confidence            9999999999999998766543

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-38  Score=266.49  Aligned_cols=243  Identities=32%  Similarity=0.480  Sum_probs=206.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +++++|+++||||+++||+++++.|+++|++|+++.|+. ...+...+++.+.   +.++.++.+|++ +.+++++++++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~   76 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA---GGRAIAVQADVA-DAAAVTRLFDA   76 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHHH
Confidence            367899999999999999999999999999998887754 3455555555442   236888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||.. ...++.+.+.+++++++++|+.+++.++++++|.|.+   .+++|++||..+..  +.+++
T Consensus        77 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~--~~~~~  150 (245)
T PRK12937         77 AETAFGRIDVLVNNAGVM-PLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIAL--PLPGY  150 (245)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccC--CCCCC
Confidence            999999999999999986 3456677889999999999999999999999999854   47999999987765  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|+++|++++.++++++.++.+.|+++++|+||+++|++............ .....|+++...|+ |+++.+.||+++
T Consensus       151 ~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-d~a~~~~~l~~~  228 (245)
T PRK12937        151 GPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQ-LAGLAPLERLGTPE-EIAAAVAFLAGP  228 (245)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHH-HHhcCCCCCCCCHH-HHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999998543222233222 33447888999998 999999999999


Q ss_pred             CCCcccccEEEeCCcc
Q 023555          254 SSEYVSGNIFIVDSGA  269 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~  269 (280)
                      .+.+++|+++.+|||+
T Consensus       229 ~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        229 DGAWVNGQVLRVNGGF  244 (245)
T ss_pred             cccCccccEEEeCCCC
Confidence            8899999999999986

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.3e-38  Score=266.80  Aligned_cols=237  Identities=31%  Similarity=0.477  Sum_probs=201.0

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++||||++|||+++|+.|+++|++|++++|. .+.++...+++.+.   +.++.++.+|++ +.++++++++++.+.+++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ---GGNARLLQFDVA-DRVACRTLLEADIAEHGA   76 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999998875 45566666666543   236888999999 789999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|++|||+|... ..++.+.+.++|+..+++|+.+++.+++++++.+.+..+.+++|++||..+..  +.+++..|+++|
T Consensus        77 i~~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~sK  153 (239)
T TIGR01831        77 YYGVVLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM--GNRGQVNYSAAK  153 (239)
T ss_pred             CCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc--CCCCCcchHHHH
Confidence            999999999863 34566778999999999999999999998864443333468999999988776  567889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccc
Q 023555          181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSG  260 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G  260 (280)
                      ++++.++++++.++.++||+||+|+||+++|++.....  +...+. ....|++++.+|+ |+++.+.||+++.+.+++|
T Consensus       154 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~-~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g  229 (239)
T TIGR01831       154 AGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE--HDLDEA-LKTVPMNRMGQPA-EVASLAGFLMSDGASYVTR  229 (239)
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh--HHHHHH-HhcCCCCCCCCHH-HHHHHHHHHcCchhcCccC
Confidence            99999999999999999999999999999999876432  222222 2347999999999 9999999999999999999


Q ss_pred             cEEEeCCcc
Q 023555          261 NIFIVDSGA  269 (280)
Q Consensus       261 ~~i~vdgG~  269 (280)
                      +++.+|||+
T Consensus       230 ~~~~~~gg~  238 (239)
T TIGR01831       230 QVISVNGGM  238 (239)
T ss_pred             CEEEecCCc
Confidence            999999996

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-38  Score=276.49  Aligned_cols=244  Identities=29%  Similarity=0.447  Sum_probs=201.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ...++++|++|||||++|||+++|++|+++|++|++++++ .+..++..+++...   +.++.++.+|++ +.+++++++
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~---g~~~~~~~~Dv~-d~~~~~~~~   81 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA---GAKAVAVAGDIS-QRATADELV   81 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc---CCeEEEEeCCCC-CHHHHHHHH
Confidence            3457999999999999999999999999999999999885 34566666766542   346888999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCCeEEEEeccccc
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN------QEGSVINISSIAAT  165 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~g~vv~vsS~~~~  165 (280)
                      +.+.+ +|++|++|||||.... ..+.+.+.++|++.+++|+.+++.+++++.++|+++.      ..|+||++||..+.
T Consensus        82 ~~~~~-~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  159 (306)
T PRK07792         82 ATAVG-LGGLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL  159 (306)
T ss_pred             HHHHH-hCCCCEEEECCCCCCC-CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc
Confidence            99998 9999999999998643 4567889999999999999999999999999997531      13799999998876


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      .  +.++...|+++|+|+++|++.++.+++++||+||+|+||. .|++......... .....    ......|+ +++.
T Consensus       160 ~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~-~~~~~----~~~~~~pe-~va~  230 (306)
T PRK07792        160 V--GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAP-DVEAG----GIDPLSPE-HVVP  230 (306)
T ss_pred             c--CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccc-hhhhh----ccCCCCHH-HHHH
Confidence            5  5577889999999999999999999999999999999994 8887654322100 00001    11123577 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++.||+++.+.++||+++.+|||...
T Consensus       231 ~v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        231 LVQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             HHHHHcCccccCCCCCEEEEcCCeEE
Confidence            99999999999999999999999755

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.8e-38  Score=266.57  Aligned_cols=244  Identities=28%  Similarity=0.487  Sum_probs=208.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |+++++|+++||||+++||++++++|+++|+.|++.+|+.+++++..+.+      +.++.++.+|++ +.+++++++++
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~~~   73 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL------GERVKIFPANLS-DRDEVKALGQK   73 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEccCC-CHHHHHHHHHH
Confidence            35688999999999999999999999999999999999888777655443      125778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++++.+.+.+++ .+++|++||..+..  +.++.
T Consensus        74 ~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~  149 (245)
T PRK12936         74 AEADLEGVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVT--GNPGQ  149 (245)
T ss_pred             HHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCc--CCCCC
Confidence            9999999999999999863 35666788899999999999999999999999887644 68999999987765  55778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|+++|+++..+++.++.++.++|+++++++||+++|++...... .. .+......|.+++..|+ ++++.+.||+++
T Consensus       150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~ia~~~~~l~~~  226 (245)
T PRK12936        150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND-KQ-KEAIMGAIPMKRMGTGA-EVASAVAYLASS  226 (245)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh-HH-HHHHhcCCCCCCCcCHH-HHHHHHHHHcCc
Confidence            8999999999999999999999999999999999999988654321 11 12222346888888888 999999999998


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      ...+++|+++.+|||+++
T Consensus       227 ~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        227 EAAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             cccCcCCCEEEECCCccc
Confidence            888999999999999865

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.7e-38  Score=267.68  Aligned_cols=246  Identities=27%  Similarity=0.476  Sum_probs=211.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..+++.+++.+.   ..++.++.+|++ +.++++++++++.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~d~~-~~~~~~~~~~~~~~   76 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK---GGNAQAFACDIT-DRDSVDTAVAAAEQ   76 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999988887777766543   236888999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++++.+.|++.+ .+++|++||..+..  +.++...|
T Consensus        77 ~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~--~~~~~~~Y  152 (250)
T TIGR03206        77 ALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARV--GSSGEAVY  152 (250)
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhcc--CCCCCchH
Confidence            999999999999975 445666788999999999999999999999999997654 68999999988766  55788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +++|+|++.++++++.++.+.||+++.++||.++|++......    +...........|.+++.+|+ |+|+.+.+|++
T Consensus       153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~  231 (250)
T TIGR03206       153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPD-DLPGAILFFSS  231 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHH-HHHHHHHHHcC
Confidence            9999999999999999999889999999999999998654321    111222233447888999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +...+++|+++.+|||+.+
T Consensus       232 ~~~~~~~g~~~~~~~g~~~  250 (250)
T TIGR03206       232 DDASFITGQVLSVSGGLTM  250 (250)
T ss_pred             cccCCCcCcEEEeCCCccC
Confidence            9999999999999999763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-38  Score=270.15  Aligned_cols=250  Identities=26%  Similarity=0.428  Sum_probs=213.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||+++||+++++.|+++|++|++++|+.++.+...+++....+ ..++.++.+|++ +.++++++++++.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~~~   81 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVT-DEDQVARAVDAAT   81 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCC-CHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998887777666654321 246788899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||+|......+..+.+.+++.+.+++|+.+++.+++++++.|.+.+ .++||++||..+..  +.+....
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~~~~  158 (276)
T PRK05875         82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASN--THRWFGA  158 (276)
T ss_pred             HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcC--CCCCCcc
Confidence            99999999999999764445667788999999999999999999999999997654 68999999988765  4567789


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|++++.+++.++.++...+|++++|+||+++|++..................|+.+++.|+ |+++++.||++...
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  237 (276)
T PRK05875        159 YGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVE-DVANLAMFLLSDAA  237 (276)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHH-HHHHHHHHHcCchh
Confidence            99999999999999999999999999999999999998754332222112222346788888998 99999999999888


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .+++|+++.+|||+.+
T Consensus       238 ~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        238 SWITGQVINVDGGHML  253 (276)
T ss_pred             cCcCCCEEEECCCeec
Confidence            8999999999999886

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-38  Score=267.68  Aligned_cols=249  Identities=32%  Similarity=0.531  Sum_probs=210.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||+++||+++|+.|+++|++|++++|+.++++...+++...   +.++.++.+|++ +.+++++++++
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~---~~~~~~~~~Dl~-d~~~i~~~~~~   82 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL---GIDALWIAADVA-DEADIERLAEE   82 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEEccCC-CHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988887777766542   236778999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH-HHhcCCCCeEEEEeccccccCCC--C
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIR-MRDANQEGSVINISSIAATSRGQ--L  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~g~vv~vsS~~~~~~~~--~  170 (280)
                      +.+.++++|++|||+|.. ...+..+.+.++|++.+++|+.+++.+++++.++ |.++ +.+++|++||..+....+  .
T Consensus        83 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-~~~~~v~~sS~~~~~~~~~~~  160 (259)
T PRK08213         83 TLERFGHVDILVNNAGAT-WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-GYGRIINVASVAGLGGNPPEV  160 (259)
T ss_pred             HHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-CCeEEEEECChhhccCCCccc
Confidence            999999999999999975 3345667889999999999999999999999998 6553 368999999976654221  1


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|+++|++++.++++++.+++++||++|.|+||+++|++.....+ .+... .....|..+++.|+ |+++.+.||
T Consensus       161 ~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~va~~~~~l  237 (259)
T PRK08213        161 MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE-RLGED-LLAHTPLGRLGDDE-DLKGAALLL  237 (259)
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH-HHHHH-HHhcCCCCCCcCHH-HHHHHHHHH
Confidence            2357899999999999999999999999999999999999998655432 22222 33446888888898 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.+.+++|+++.+|||+++
T Consensus       238 ~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        238 ASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             hCccccCccCCEEEECCCeec
Confidence            999999999999999999864

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-38  Score=267.96  Aligned_cols=241  Identities=27%  Similarity=0.384  Sum_probs=202.4

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecC-----------hhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARR-----------VDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      ++++|++|||||++  |||+++++.|+++|++|++++|+           ........+++...   +.++.++.+|++ 
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-   77 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY---GVRCEHMEIDLS-   77 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc---CCeEEEEECCCC-
Confidence            67899999999994  99999999999999999999987           22222233444322   236888999999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                      +.++++++++++.+.++++|++|||||.. ...++.+.+.+++++.+++|+.+++.+++++++.|.+. ..+++|++||.
T Consensus        78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~  155 (256)
T PRK12748         78 QPYAPNRVFYAVSERLGDPSILINNAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-AGGRIINLTSG  155 (256)
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-CCeEEEEECCc
Confidence            78999999999999999999999999975 34567788999999999999999999999999999764 36899999998


Q ss_pred             ccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHH
Q 023555          163 AATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      .+..  +.+++..|+++|++++.++++++.++..+||+|++|+||+++|++....     .........|..+..+|+ |
T Consensus       156 ~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~-----~~~~~~~~~~~~~~~~~~-~  227 (256)
T PRK12748        156 QSLG--PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE-----LKHHLVPKFPQGRVGEPV-D  227 (256)
T ss_pred             cccC--CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh-----HHHhhhccCCCCCCcCHH-H
Confidence            7765  5677889999999999999999999999999999999999999875421     111122335677788888 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +++.+.||+++.+.+++|+++.+|||+.
T Consensus       228 ~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        228 AARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHHHHHhCcccccccCCEEEecCCcc
Confidence            9999999999999999999999999974

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=269.10  Aligned_cols=246  Identities=27%  Similarity=0.406  Sum_probs=204.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|++|++|||||++|||+++++.|+++|++|++++|+++.. +..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   77 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL---QPRAEFVQVDLT-DDAQCRDAVEQT   77 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc---CCceEEEEccCC-CHHHHHHHHHHH
Confidence            369999999999999999999999999999999999998776 555665443   236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|... ...+... .++|++.+++|+.+++.+.+.++|.|++.  .+++|++||..+..  +.+++.
T Consensus        78 ~~~~~~id~vi~~ag~~~-~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~--~~~~~~  151 (258)
T PRK08628         78 VAKFGRIDGLVNNAGVND-GVGLEAG-REAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALT--GQGGTS  151 (258)
T ss_pred             HHhcCCCCEEEECCcccC-CCcccCC-HHHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhcc--CCCCCc
Confidence            999999999999999753 2334444 49999999999999999999999999753  48999999988775  557889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----chhhhhhhhhcCCCCC-CCCCChHHHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLR-DFGTTDPALTSLVRY  249 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~p~~-~~~~~~~~va~~~~~  249 (280)
                      .|++||++++.+++.++.++.++||+||+|+||.++|++.....    .............|.+ ++.+|+ |+++.+.|
T Consensus       152 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~  230 (258)
T PRK08628        152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAE-EIADTAVF  230 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999999754311    1111111122234664 678888 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++++.+.+++|+.+.+|||++..
T Consensus       231 l~~~~~~~~~g~~~~~~gg~~~~  253 (258)
T PRK08628        231 LLSERSSHTTGQWLFVDGGYVHL  253 (258)
T ss_pred             HhChhhccccCceEEecCCcccc
Confidence            99999999999999999998653

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=275.58  Aligned_cols=240  Identities=26%  Similarity=0.404  Sum_probs=205.7

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +++.++++|++|||||++|||+++++.|+++|++|++++|+.++++++.+++..    ..++..+.+|++ +.+++++++
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~----~~~~~~~~~Dv~-d~~~v~~~~   76 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG----DDRVLTVVADVT-DLAAMQAAA   76 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC----CCcEEEEEecCC-CHHHHHHHH
Confidence            456689999999999999999999999999999999999999888887776632    335677789999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.++  .|+||++||..+..  +.+
T Consensus        77 ~~~~~~~g~id~vI~nAG~~-~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~  151 (296)
T PRK05872         77 EEAVERFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFA--AAP  151 (296)
T ss_pred             HHHHHHcCCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcC--CCC
Confidence            99999999999999999986 35677889999999999999999999999999999763  58999999988876  667


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-hhhhhhhhc-CCCCCCCCCChHHHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-DWLNNVASR-TYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-~~~~~~~~~-~~p~~~~~~~~~~va~~~~~  249 (280)
                      ++..|++||++++.|+++++.|++++||+||+++||+++|++....... +........ ..|+++..+|+ |+++.+.+
T Consensus       152 ~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~i~~  230 (296)
T PRK05872        152 GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVE-KCAAAFVD  230 (296)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHH-HHHHHHHH
Confidence            8899999999999999999999999999999999999999987654322 222222222 24678888888 99999999


Q ss_pred             hhcCCCCcccccE
Q 023555          250 LVHDSSEYVSGNI  262 (280)
Q Consensus       250 l~s~~~~~i~G~~  262 (280)
                      +++....+++|..
T Consensus       231 ~~~~~~~~i~~~~  243 (296)
T PRK05872        231 GIERRARRVYAPR  243 (296)
T ss_pred             HHhcCCCEEEchH
Confidence            9998888887763

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=271.34  Aligned_cols=240  Identities=23%  Similarity=0.355  Sum_probs=199.9

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-------HHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      ++++++|+++||||++|||+++++.|+++|++|++++|+.+.       +++..+++...   +.++.++.+|++ +.++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~D~~-~~~~   76 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA---GGQALPLVGDVR-DEDQ   76 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc---CCceEEEEecCC-CHHH
Confidence            356889999999999999999999999999999999997643       34444555432   336788999999 7899


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      ++++++++.+.++++|++|||||.. ...+..+.+.+++++.+++|+.+++.+++++.|+|+++. +|++|++||..+..
T Consensus        77 i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~  154 (273)
T PRK08278         77 VAAAVAKAVERFGGIDICVNNASAI-NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLD  154 (273)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCc-CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhcc
Confidence            9999999999999999999999975 345667889999999999999999999999999998754 68999999977655


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecC-cccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPG-LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      ....+++..|++||+|++.|+++++.|++++||+||+|+|| +++|++.+....         ...+..+..+|+ ++++
T Consensus       155 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~---------~~~~~~~~~~p~-~va~  224 (273)
T PRK08278        155 PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG---------GDEAMRRSRTPE-IMAD  224 (273)
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc---------ccccccccCCHH-HHHH
Confidence            22126788999999999999999999999999999999999 688876543221         113455677888 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCccc
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      .+.+|+++...++||+.+ +|++..
T Consensus       225 ~~~~l~~~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        225 AAYEILSRPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             HHHHHhcCccccceeEEE-eccchh
Confidence            999999998899999877 677653

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=267.92  Aligned_cols=244  Identities=24%  Similarity=0.398  Sum_probs=195.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC----hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +++++|++|||||++|||+++|+.|+++|++|++++++    .+.+++..+++...   +.++.++.+|++ +.++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~   79 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA---GAKAVAFQADLT-TAAAVEKL   79 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh---CCcEEEEecCcC-CHHHHHHH
Confidence            45789999999999999999999999999997766543    33455555555432   236778899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe-ccccccCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS-SIAATSRGQ  169 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs-S~~~~~~~~  169 (280)
                      ++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|++   .+++++++ |..+ .  .
T Consensus        80 ~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~-~--~  152 (257)
T PRK12744         80 FDDAKAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLG-A--F  152 (257)
T ss_pred             HHHHHHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhc-c--c
Confidence            9999999999999999999853 356678899999999999999999999999999964   36777764 4333 2  3


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhh--hhhhcCCCCC--CCCCChHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN--NVASRTYPLR--DFGTTDPALTS  245 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~p~~--~~~~~~~~va~  245 (280)
                      .+.+..|++||+|++.|+++++.|+.++||+||+|+||++.|++...........  .......|+.  ++..|+ |+++
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~  231 (257)
T PRK12744        153 TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIE-DIVP  231 (257)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHH-HHHH
Confidence            4678899999999999999999999999999999999999999764322211110  1111123443  778888 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.||+++ ..+++|+++.+|||+.+
T Consensus       232 ~~~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        232 FIRFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             HHHHhhcc-cceeecceEeecCCccC
Confidence            99999995 67999999999999865

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=5.8e-38  Score=265.37  Aligned_cols=245  Identities=28%  Similarity=0.427  Sum_probs=202.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++....+ ...+.++.+|++ +.+++.++++++.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~-d~~~~~~~~~~~~~   79 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK-SKKLSLVELDIT-DQESLEEFLSKSAE   79 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcC-CCceeEEEecCC-CHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999999999888888777754332 224567799999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC-----
Q 023555           97 AFGRIDALVNNAGVSGA--VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ-----  169 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~-----  169 (280)
                      .++++|++||||+....  ..++.+.+.++++..+++|+.+++.++++++|.|++++ .++||++||..+.....     
T Consensus        80 ~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~  158 (256)
T PRK09186         80 KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYE  158 (256)
T ss_pred             HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhcc
Confidence            99999999999975421  24567889999999999999999999999999998654 67999999977643110     


Q ss_pred             ---CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          170 ---LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       170 ---~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                         ......|++||+++++|+++++.++.++||+||.|+||.+.++...     ..... .....|.+++..|+ |+|+.
T Consensus       159 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~-dva~~  231 (256)
T PRK09186        159 GTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE-----AFLNA-YKKCCNGKGMLDPD-DICGT  231 (256)
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH-----HHHHH-HHhcCCccCCCCHH-Hhhhh
Confidence               1122469999999999999999999999999999999998876421     11111 22235667788898 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.|++++...+++|+++.+|||+++
T Consensus       232 ~~~l~~~~~~~~~g~~~~~~~g~~~  256 (256)
T PRK09186        232 LVFLLSDQSKYITGQNIIVDDGFSL  256 (256)
T ss_pred             HhheeccccccccCceEEecCCccC
Confidence            9999999899999999999999863

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-38  Score=265.68  Aligned_cols=242  Identities=27%  Similarity=0.484  Sum_probs=203.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .|+||+++||||++|||.+++++|+++|++|++++|+....++..+++.        ..++.+|++ +.++++++++++.
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~-~~~~~~~~~~~~~   74 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--------GLFVPTDVT-DEDAVNALFDTAA   74 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--------CcEEEeeCC-CHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877666554431        246789999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      +.++++|++|||||...+. .++.+.+.+++++.+++|+.+++.+++.++|+|++++ .|++|++||..+... ..+++.
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g-~~~~~~  152 (255)
T PRK06057         75 ETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMG-SATSQI  152 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccC-CCCCCc
Confidence            9999999999999975332 3566788999999999999999999999999998644 689999999766441 224677


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      .|+++|++++.+++.++.++.++||+|++|+||+++|++......  .....+.. ...|++++.+|+ |+++.+.||++
T Consensus       153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~a~~~~~l~~  230 (255)
T PRK06057        153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRL-VHVPMGRFAEPE-EIAAAVAFLAS  230 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH-hcCCCCCCcCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999998654321  11111222 236788899998 99999999999


Q ss_pred             CCCCcccccEEEeCCccc
Q 023555          253 DSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~  270 (280)
                      +...+++|+.+.+|||+.
T Consensus       231 ~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        231 DDASFITASTFLVDGGIS  248 (255)
T ss_pred             ccccCccCcEEEECCCee
Confidence            999999999999999975

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=262.87  Aligned_cols=247  Identities=31%  Similarity=0.517  Sum_probs=209.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |+++++|++|||||+++||++++++|+++|++|++++|+++..+.+.+++.+.   ..+..++.+|++ +.+++++++++
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~   76 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD---GGTAIAVQVDVS-DPDSAKAMADA   76 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988777777666542   225678899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA--VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +.+.++++|+||||||....  ..++.+.+.+++++.+++|+.+++.++++++++|.+.+ .|+||++||..+..     
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-----  150 (250)
T PRK07774         77 TVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL-----  150 (250)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC-----
Confidence            99999999999999998632  24556778999999999999999999999999997754 68999999977543     


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||++++.++++++.++.+.||+++.++||.++|++.....+........ +..|..++..|+ |+++.+.+++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-d~a~~~~~~~  228 (250)
T PRK07774        151 YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMV-KGIPLSRMGTPE-DLVGMCLFLL  228 (250)
T ss_pred             CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHH-hcCCCCCCcCHH-HHHHHHHHHh
Confidence            45689999999999999999999999999999999999999876544443333333 336777788888 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +....+++|+++.+|+|.++.
T Consensus       229 ~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        229 SDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             ChhhhCcCCCEEEECCCeecc
Confidence            877778999999999998875

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=3.4e-38  Score=249.64  Aligned_cols=251  Identities=22%  Similarity=0.328  Sum_probs=221.4

Q ss_pred             CCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..|+||++||+|-.  +.|+..||+.+.++|+++.+++.++ ++++-.+++-+..+   ....++||++ +.++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~---s~~v~~cDV~-~d~~i~~~f~   76 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG---SDLVLPCDVT-NDESIDALFA   76 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc---CCeEEecCCC-CHHHHHHHHH
Confidence            47999999999965  8999999999999999999999987 56655666655443   2567899999 6799999999


Q ss_pred             HHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      ++.+++|++|.+||+-++...   .+.+.+.+.|.|...+++..++...+.+++.|.|..   +|++|.++-..+..  .
T Consensus        77 ~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r--~  151 (259)
T COG0623          77 TIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSER--V  151 (259)
T ss_pred             HHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEecccee--e
Confidence            999999999999999998631   256668999999999999999999999999999965   78999999877766  5


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .|.+-..+.+|+++++-+|.+|.+++++|||||.|+.|+++|--...+.....+..+.+.+.|++|..+++ ||+++..|
T Consensus       152 vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~e-eVG~tA~f  230 (259)
T COG0623         152 VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIE-EVGNTAAF  230 (259)
T ss_pred             cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHH-HhhhhHHH
Confidence            67788999999999999999999999999999999999999977777766555666677778999999998 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      |+|+-++.+||+++.||+|+++.+|+.
T Consensus       231 LlSdLssgiTGei~yVD~G~~i~~m~~  257 (259)
T COG0623         231 LLSDLSSGITGEIIYVDSGYHIMGMGP  257 (259)
T ss_pred             HhcchhcccccceEEEcCCceeeccCC
Confidence            999999999999999999999999983

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.8e-38  Score=268.77  Aligned_cols=239  Identities=26%  Similarity=0.335  Sum_probs=196.6

Q ss_pred             EEEEecCCChhHHHHHHHHHH----hCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAK----AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +++||||++|||+++|++|++    .|++|++++|+.+.+++..+++.... .+.++.++.+|++ +.++++++++++.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~v~~~~~Dl~-~~~~v~~~~~~~~~   79 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER-SGLRVVRVSLDLG-AEAGLEQLLKALRE   79 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC-CCceEEEEEeccC-CHHHHHHHHHHHHh
Confidence            689999999999999999997    79999999999998888888876432 2346788999999 78999999999988


Q ss_pred             HcCCc----cEEEECCCCCCCCCC-CCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEeccccccCCC
Q 023555           97 AFGRI----DALVNNAGVSGAVKS-PLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATSRGQ  169 (280)
Q Consensus        97 ~~g~i----d~li~~ag~~~~~~~-~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~~~~~~  169 (280)
                      .++.+    |++|||||....... ..+ .+.++|++.+++|+.+++.+++.++|.|+++. ..++||++||..+..  +
T Consensus        80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~--~  157 (256)
T TIGR01500        80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ--P  157 (256)
T ss_pred             ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC--C
Confidence            77653    699999997533222 222 35789999999999999999999999998642 247999999988766  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---hhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      .+++..|++||+|+++|+++++.|++++||+||+|+||+++|++......   ++..........|++++.+|+ |+|+.
T Consensus       158 ~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-eva~~  236 (256)
T TIGR01500       158 FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPK-VSAQK  236 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHH-HHHHH
Confidence            67889999999999999999999999999999999999999998653211   111222233346899999998 99999


Q ss_pred             HHHhhcCCCCcccccEEEe
Q 023555          247 VRYLVHDSSEYVSGNIFIV  265 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~v  265 (280)
                      +.+|++ ..+++||+.+..
T Consensus       237 ~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       237 LLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHh-cCCcCCcceeec
Confidence            999996 578999998764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-38  Score=265.08  Aligned_cols=249  Identities=29%  Similarity=0.492  Sum_probs=211.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||+++||+++++.|+++|++|++++|+++..++..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~   78 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA---GGKAIGVAMDVT-NEDAVNAGIDKV   78 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc---CceEEEEECCCC-CHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888877553   336788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|.. ...+..+.+.++++..+++|+.+++.+++++++.|.+..+.++||++||..+..  +.+...
T Consensus        79 ~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~--~~~~~~  155 (262)
T PRK13394         79 AERFGSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE--ASPLKS  155 (262)
T ss_pred             HHHcCCCCEEEECCccC-CCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC--CCCCCc
Confidence            99999999999999986 334566778899999999999999999999999994334468999999987765  456778


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch----------hhhhhhhhcCCCCCCCCCChHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK----------DWLNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~----------~~~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      .|+++|++++.+++.++.++.+.||++++|+||+++|++.......          +...++.....+.+++..++ |++
T Consensus       156 ~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  234 (262)
T PRK13394        156 AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVE-DVA  234 (262)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHH-HHH
Confidence            9999999999999999999998999999999999999875433211          11222333345678889998 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.++++....+++|+++.+|||+.+
T Consensus       235 ~a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        235 QTVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHHHHcCccccCCcCCEEeeCCceec
Confidence            999999998778999999999999865

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-38  Score=262.38  Aligned_cols=215  Identities=24%  Similarity=0.329  Sum_probs=179.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +++||||++|||+++++.|+++|++|++++|+.+++++..+++        ...++.+|++ +.++++++++++.+   +
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~D~~-~~~~v~~~~~~~~~---~   69 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--------DVDAIVCDNT-DPASLEEARGLFPH---H   69 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------cCcEEecCCC-CHHHHHHHHHHHhh---c
Confidence            5899999999999999999999999999999988877665543        2456789999 78889888877643   6


Q ss_pred             ccEEEECCCCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555          101 IDALVNNAGVSGAV-----KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus       101 id~li~~ag~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +|++|||+|.....     .++.+ +.++|++.+++|+.+++.++|+++|+|++   .|+||++||..      .+.+..
T Consensus        70 id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~------~~~~~~  139 (223)
T PRK05884         70 LDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN------PPAGSA  139 (223)
T ss_pred             CcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC------CCCccc
Confidence            99999999853111     12333 57899999999999999999999999964   48999999865      245678


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|+.+|+++++.|++++||+||+|+||+++|++....          . ..|.   .+|+ |+++.+.||+++.+
T Consensus       140 Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~----------~-~~p~---~~~~-~ia~~~~~l~s~~~  204 (223)
T PRK05884        140 EAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL----------S-RTPP---PVAA-EIARLALFLTTPAA  204 (223)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc----------c-CCCC---CCHH-HHHHHHHHHcCchh
Confidence            999999999999999999999999999999999999864211          1 1333   2677 99999999999999


Q ss_pred             CcccccEEEeCCcccCC
Q 023555          256 EYVSGNIFIVDSGATLP  272 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~  272 (280)
                      .++||+++.+|||+..+
T Consensus       205 ~~v~G~~i~vdgg~~~~  221 (223)
T PRK05884        205 RHITGQTLHVSHGALAH  221 (223)
T ss_pred             hccCCcEEEeCCCeecc
Confidence            99999999999999765

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=5.2e-38  Score=267.50  Aligned_cols=243  Identities=26%  Similarity=0.387  Sum_probs=192.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHH----HHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAI----ENSVQK   93 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~~~   93 (280)
                      .++++||||++|||+++++.|+++|++|++++| +++.++.+.+++.+..+  .+..++.+|++ +.+++    +++++.
T Consensus         1 ~~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~-d~~~~~~~~~~~~~~   77 (267)
T TIGR02685         1 APAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP--NSAVTCQADLS-NSATLFSRCEAIIDA   77 (267)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccC--CceEEEEccCC-CchhhHHHHHHHHHH
Confidence            378999999999999999999999999998875 45677777777654322  25667899999 55644    566666


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEE
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTE-----------EEWNHIMKTNLTGSWLVSKYVCIRMRDAN-----QEGSVI  157 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~vv  157 (280)
                      +.+.++++|+||||||...+ .++.+.+.           ++|.+++++|+.+++.++++++|+|++..     ..++||
T Consensus        78 ~~~~~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv  156 (267)
T TIGR02685        78 CFRAFGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIV  156 (267)
T ss_pred             HHHccCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEE
Confidence            66788999999999997533 23333232           36889999999999999999999996431     246899


Q ss_pred             EEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCC-CC
Q 023555          158 NISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR-DF  236 (280)
Q Consensus       158 ~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~-~~  236 (280)
                      +++|..+..  +.+++..|++||+|+++|+++++.|++++||+||+|+||+++|+...   +......+. ...|++ +.
T Consensus       157 ~~~s~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~~~~~~~~~-~~~~~~~~~  230 (267)
T TIGR02685       157 NLCDAMTDQ--PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---PFEVQEDYR-RKVPLGQRE  230 (267)
T ss_pred             EehhhhccC--CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---chhHHHHHH-HhCCCCcCC
Confidence            999987765  66788999999999999999999999999999999999998766321   112122222 235665 67


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ..|+ |+++.+.||+++.+.+++|+.+.+|||+++.
T Consensus       231 ~~~~-~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       231 ASAE-QIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             CCHH-HHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            7888 9999999999999999999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=261.73  Aligned_cols=243  Identities=30%  Similarity=0.464  Sum_probs=202.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|++|||||+++||++++++|+++|++|++++ |+++..+...+.+...   +.++.++.+|++ +.++++++++++.+.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~~~   77 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ---GGEALAVAADVA-DEADVLRLFEAVDRE   77 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC---CCcEEEEEeccC-CHHHHHHHHHHHHHH
Confidence            57999999999999999999999999998887 4455566665555432   235778999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCCC-CC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPG-GV  174 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~~-~~  174 (280)
                      ++++|++|||||......++.+.+.++|++.+++|+.+++.+++++++.|.++.  ++|+||++||..+..  +.++ +.
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  155 (248)
T PRK06123         78 LGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL--GSPGEYI  155 (248)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC--CCCCCcc
Confidence            999999999999865445667889999999999999999999999999997532  257899999987765  3344 36


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.|++.++.++.++||+|++|+||.+.|++......+.+... .....|+++...|+ |+++.+.||+++.
T Consensus       156 ~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~-d~a~~~~~l~~~~  233 (248)
T PRK06123        156 DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDR-VKAGIPMGRGGTAE-EVARAILWLLSDE  233 (248)
T ss_pred             chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            799999999999999999999999999999999999997543222222222 33347888888998 9999999999988


Q ss_pred             CCcccccEEEeCCcc
Q 023555          255 SEYVSGNIFIVDSGA  269 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~  269 (280)
                      ..+++|+++.+|||.
T Consensus       234 ~~~~~g~~~~~~gg~  248 (248)
T PRK06123        234 ASYTTGTFIDVSGGR  248 (248)
T ss_pred             ccCccCCEEeecCCC
Confidence            889999999999973

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=261.41  Aligned_cols=243  Identities=31%  Similarity=0.473  Sum_probs=201.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||||++|||+++++.|+++|++|+++. |+.+.++...+++...   ..++.++.+|++ +.++++++++++.+.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~~~   77 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA---GGRACVVAGDVA-NEADVIAMFDAVQSA   77 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEeccC-CHHHHHHHHHHHHHh
Confidence            47999999999999999999999999998765 6666777776666542   236888999999 789999999999988


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCC-CCC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLP-GGV  174 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~-~~~  174 (280)
                      ++++|++|||||......++.+.+.++++..+++|+.+++.+++++++.|..++  ..+++|++||..+..  +.+ .+.
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~~  155 (248)
T PRK06947         78 FGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL--GSPNEYV  155 (248)
T ss_pred             cCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC--CCCCCCc
Confidence            999999999999865445667889999999999999999999999999987532  246899999987765  333 356


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||++++.|+++++.+++++||+|+.|+||+++|++.......+.. .......|+++..+|+ ++++.+.||+++.
T Consensus       156 ~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~e-~va~~~~~l~~~~  233 (248)
T PRK06947        156 DYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRA-ARLGAQTPLGRAGEAD-EVAETIVWLLSDA  233 (248)
T ss_pred             ccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHH-HHHhhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            8999999999999999999999999999999999999986432111221 1222346788888888 9999999999999


Q ss_pred             CCcccccEEEeCCcc
Q 023555          255 SEYVSGNIFIVDSGA  269 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~  269 (280)
                      .++++|++|.+|||.
T Consensus       234 ~~~~~G~~~~~~gg~  248 (248)
T PRK06947        234 ASYVTGALLDVGGGR  248 (248)
T ss_pred             ccCcCCceEeeCCCC
Confidence            999999999999984

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-37  Score=262.92  Aligned_cols=243  Identities=30%  Similarity=0.482  Sum_probs=204.5

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+++.+..+ ......+.+|++ +.++++++++++.+.+++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHG-EGVAFAAVQDVT-DEAQWQALLAQAADAMGG   79 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-CceEEEEEeecC-CHHHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999999998 6667776666654322 123456789999 789999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|++|||||.. ...++.+.+.+++++++++|+.+++.+++.+++.|++.+ .++||++||..+..  +.+++..|+++|
T Consensus        80 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~--~~~~~~~Y~~sK  155 (251)
T PRK07069         80 LSVLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFK--AEPDYTAYNASK  155 (251)
T ss_pred             ccEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhcc--CCCCCchhHHHH
Confidence            99999999986 345677888999999999999999999999999998754 68999999988776  567888999999


Q ss_pred             HHHHHHHHHHHHHhCCCC--eEEEEeecCcccCccccCccc---hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          181 AGLNAMTKCLSLELGVHK--IRVNSICPGLFKSEITEGLMK---KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~g--i~vn~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      ++++.|+++++.++++++  |+|++|+||+++|++......   .+.......+..|.+++.+|+ |+++.+.||+++..
T Consensus       156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~  234 (251)
T PRK07069        156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPD-DVAHAVLYLASDES  234 (251)
T ss_pred             HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            999999999999998765  999999999999998654321   111112233447888888998 99999999999989


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .++||+.+.+|||+..
T Consensus       235 ~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        235 RFVTGAELVIDGGICA  250 (251)
T ss_pred             cCccCCEEEECCCeec
Confidence            9999999999999764

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=261.88  Aligned_cols=247  Identities=30%  Similarity=0.500  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|+++||||+++||+++++.|+++|++|++++|+.+..++..+++.    .+.++..+.+|++ +.++++++++++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~-~~~~~~~~~~~i   75 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA----AGGRAFARQGDVG-SAEAVEALVDFV   75 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh----cCCeEEEEEcCCC-CHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999887777666664    1346788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|.. ...+..+.+.+++++.+++|+.+++.+++.+++.|++.+ .++||++||..+..  +.++..
T Consensus        76 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~~  151 (252)
T PRK06138         76 AARWGRLDVLVNNAGFG-CGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALA--GGRGRA  151 (252)
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhcc--CCCCcc
Confidence            99999999999999986 345666788999999999999999999999999998754 68999999987765  556788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      .|+.+|++++.++++++.++..+|+++++++||.++|++......    .+..........|..++..++ |++..+.++
T Consensus       152 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l  230 (252)
T PRK06138        152 AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAE-EVAQAALFL  230 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999998654321    122222222334666678888 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++....+++|+.+.+|||+++
T Consensus       231 ~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        231 ASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             cCchhcCccCCEEEECCCeec
Confidence            998889999999999999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2e-37  Score=260.20  Aligned_cols=243  Identities=27%  Similarity=0.447  Sum_probs=204.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||||+++||+++|+.|+++|++|++++|+.. ..++...++..   .+.++.++.+|++ +.++++++++++.+.
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~-~~~~v~~~~~~~~~~   77 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF---TEDQVRLKELDVT-DTEECAEALAEIEEE   77 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc---cCCeEEEEEcCCC-CHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999854 22222222221   2346888999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      ++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++++.|++.. .+++|++||..+..  +.+++..|+
T Consensus        78 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~--~~~~~~~Y~  153 (245)
T PRK12824         78 EGPVDILVNNAGIT-RDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLK--GQFGQTNYS  153 (245)
T ss_pred             cCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhcc--CCCCChHHH
Confidence            99999999999986 345667889999999999999999999999999998654 68999999988765  567889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      ++|+|++++++.++.++.++||+++.++||+++|++...... ..... .....|+++...++ |+++.+.||+++.+.+
T Consensus       154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~  230 (245)
T PRK12824        154 AAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP-EVLQS-IVNQIPMKRLGTPE-EIAAAVAFLVSEAAGF  230 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH-HHHHH-HHhcCCCCCCCCHH-HHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999998765432 22222 23346788888888 9999999999988899


Q ss_pred             ccccEEEeCCcccCC
Q 023555          258 VSGNIFIVDSGATLP  272 (280)
Q Consensus       258 i~G~~i~vdgG~~~~  272 (280)
                      ++|+.+.+|||++++
T Consensus       231 ~~G~~~~~~~g~~~~  245 (245)
T PRK12824        231 ITGETISINGGLYMH  245 (245)
T ss_pred             ccCcEEEECCCeecC
Confidence            999999999999763

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7e-38  Score=258.95  Aligned_cols=195  Identities=29%  Similarity=0.444  Sum_probs=181.8

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +..+.+|++||||||++|+|+++|.+|+++|+.++++|.+.+..++..+++.+. |   ++....||++ +++++.+.++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g---~~~~y~cdis-~~eei~~~a~  106 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G---EAKAYTCDIS-DREEIYRLAK  106 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C---ceeEEEecCC-CHHHHHHHHH
Confidence            667899999999999999999999999999999999999999999999998765 2   7889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++++.+|++|++|||||+. +..++.+.+.+++++.+++|+.|++..+|+|+|.|.+.+ .|+||+++|+.+..  +.++
T Consensus       107 ~Vk~e~G~V~ILVNNAGI~-~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~--g~~g  182 (300)
T KOG1201|consen  107 KVKKEVGDVDILVNNAGIV-TGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLF--GPAG  182 (300)
T ss_pred             HHHHhcCCceEEEeccccc-cCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhccc--CCcc
Confidence            9999999999999999997 667888999999999999999999999999999999865 89999999999988  6789


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhC---CCCeEEEEeecCcccCccccC
Q 023555          173 GVAYASSKAGLNAMTKCLSLELG---VHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~---~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      ...|++||.|+.+|.+++..|+.   .+||+...|+|++++|.|...
T Consensus       183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            99999999999999999999984   468999999999999999764

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=260.90  Aligned_cols=241  Identities=37%  Similarity=0.542  Sum_probs=200.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|+++||||+++||+++++.|+++|++|++++|+.+++++..++.        ...++.+|++ +.++++++++.
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--------~~~~~~~D~~-~~~~v~~~~~~   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET--------GCEPLRLDVG-DDAAIRAALAA   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCeEEEecCC-CHHHHHHHHHH
Confidence            34789999999999999999999999999999999999987776554432        2456789999 66667666654


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                          .+++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++++.+.+.+++..++||++||..+..  +.+++
T Consensus        75 ----~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~  147 (245)
T PRK07060         75 ----AGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV--GLPDH  147 (245)
T ss_pred             ----hCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC--CCCCC
Confidence                57899999999986 345566788999999999999999999999999997654358999999988766  55778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|+++|++++.+++.++.++.+.||++++++||.+.|++....+.............|.+++..++ |+++.+.+|+++
T Consensus       148 ~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~  226 (245)
T PRK07060        148 LAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVD-DVAAPILFLLSD  226 (245)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCc
Confidence            8999999999999999999999999999999999999998643322222222222346888899998 999999999999


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      ...+++|+.+.+|||+.+
T Consensus       227 ~~~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        227 AASMVSGVSLPVDGGYTA  244 (245)
T ss_pred             ccCCccCcEEeECCCccC
Confidence            889999999999999865

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=259.35  Aligned_cols=236  Identities=22%  Similarity=0.272  Sum_probs=198.1

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC-CHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA-NGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~   92 (280)
                      |.+|++|+++||||++|||+++++.|+++|++|++++|+++.++...+++.+..+  .....+.+|+++ +.++++++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH--PEPFAIRFDLMSAEEKEFEQFAA   78 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC--CCcceEEeeecccchHHHHHHHH
Confidence            3568899999999999999999999999999999999999888888777754322  245677889873 2567899999


Q ss_pred             HHHHHc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           93 KAWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        93 ~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      ++.+.+ +++|++|||||......++.+.+.+++++.+++|+.+++.++++++|.|.+.+ .+++|+++|..+..  +.+
T Consensus        79 ~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~  155 (239)
T PRK08703         79 TIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGET--PKA  155 (239)
T ss_pred             HHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEecccccc--CCC
Confidence            998888 88999999999764445777889999999999999999999999999997644 68999999988766  567


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCC-CeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVH-KIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~-gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++..|++||++++.|+++++.++.++ +|+|++|.||+++|++.....+...          ..+...++ ++++.+.|+
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~  224 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYG-DVLPAFVWW  224 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHH-HHHHHHHHH
Confidence            78899999999999999999999887 6999999999999998653221110          01123566 999999999


Q ss_pred             hcCCCCcccccEEEe
Q 023555          251 VHDSSEYVSGNIFIV  265 (280)
Q Consensus       251 ~s~~~~~i~G~~i~v  265 (280)
                      +++.+.++||++|.|
T Consensus       225 ~~~~~~~~~g~~~~~  239 (239)
T PRK08703        225 ASAESKGRSGEIVYL  239 (239)
T ss_pred             hCccccCcCCeEeeC
Confidence            999999999999875

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-37  Score=260.71  Aligned_cols=247  Identities=32%  Similarity=0.473  Sum_probs=207.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      |.++++|+++||||+++||+++|+.|+++|++|++. .|+.+++++..+++...   +.++.++.+|++ +.+++.++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-d~~~i~~~~~   76 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN---GGKAFLIEADLN-SIDGVKKLVE   76 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCcC-CHHHHHHHHH
Confidence            356889999999999999999999999999998774 78877777776666432   235778899999 7899999999


Q ss_pred             HHHHHc------CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           93 KAWEAF------GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        93 ~~~~~~------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      ++.+.+      +++|++|||||.. ....+.+.+.+.|++.+++|+.+++.+++++++.|.+   .+++|++||..+..
T Consensus        77 ~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~  152 (254)
T PRK12746         77 QLKNELQIRVGTSEIDILVNNAGIG-TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRL  152 (254)
T ss_pred             HHHHHhccccCCCCccEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcC
Confidence            998876      5799999999976 3356677899999999999999999999999999864   37999999987765


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                        +.+++..|++||++++.++++++.++.++|+++++|+||+++|++.......+..........++++...++ |+++.
T Consensus       153 --~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  229 (254)
T PRK12746        153 --GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE-DIADA  229 (254)
T ss_pred             --CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHH-HHHHH
Confidence              567888999999999999999999999999999999999999998765433222223333445678888888 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.+++++.+.+++|+.+.++||+++
T Consensus       230 ~~~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        230 VAFLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             HHHHcCcccCCcCCCEEEeCCCccC
Confidence            9999998878999999999999764

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-37  Score=260.74  Aligned_cols=247  Identities=29%  Similarity=0.451  Sum_probs=209.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..+++|+++||||+++||+++++.|+++|++ |++++|+.++.+...+++...   +.++.++.+|++ +.+++.++++.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~~   77 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL---GAKAVFVQADLS-DVEDCRRVVAA   77 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEccCC-CHHHHHHHHHH
Confidence            4688999999999999999999999999999 999999987777666666432   336778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||+|.. ....+.+.+.++++..+++|+.+++.+++++++.|.+++..|++|++||..+..  +.++.
T Consensus        78 ~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~  154 (260)
T PRK06198         78 ADEAFGRLDALVNAAGLT-DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG--GQPFL  154 (260)
T ss_pred             HHHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc--CCCCc
Confidence            999999999999999976 345666789999999999999999999999999997755468999999988765  55778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc------chhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM------KKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      ..|+++|+++++++++++.++...||+|++|+||++.|++.....      ...+... .....|.++...++ |+++.+
T Consensus       155 ~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~a~~~  232 (260)
T PRK06198        155 AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEK-AAATQPFGRLLDPD-EVARAV  232 (260)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHH-HhccCCccCCcCHH-HHHHHH
Confidence            899999999999999999999999999999999999998743211      0112222 22346778888888 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCccc
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      .+|+++..++++|+.+.+|||..
T Consensus       233 ~~l~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        233 AFLLSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             HHHcChhhCCccCceEeECCccc
Confidence            99999888999999999999964

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-37  Score=259.18  Aligned_cols=247  Identities=32%  Similarity=0.532  Sum_probs=211.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+++++..+++...   +.++..+.+|++ +.++++++++++.
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~   76 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA---GGKAIGVAMDVT-DEEAINAGIDYAV   76 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998888877777542   346888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||+|.. ......+.+.++++..+++|+.+++.+++.+++.|++++ .+++|++||..+..  +.++...
T Consensus        77 ~~~~~~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~--~~~~~~~  152 (258)
T PRK12429         77 ETFGGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLV--GSAGKAA  152 (258)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhcc--CCCCcch
Confidence            9999999999999976 345666788999999999999999999999999998754 68999999988766  6678899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      |+++|++++.+++.++.++.+.||++++++||++.|++......          ............+.+++..++ |+++
T Consensus       153 y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~  231 (258)
T PRK12429        153 YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE-EIAD  231 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHH-HHHH
Confidence            99999999999999999999999999999999999987643211          111122233334667888898 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.+|+++....++|+++.+|||++.
T Consensus       232 ~~~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        232 YALFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHHHHcCccccCccCCeEEeCCCEec
Confidence            99999988888999999999999875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=256.17  Aligned_cols=244  Identities=28%  Similarity=0.520  Sum_probs=205.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++++++|||||++|||+++++.|+++|++|++++|+.++++...+++.+.   +.++..+.+|++ +.++++++++.+.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   77 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL---GTEVRGYAANVT-DEEDVEATFAQIA   77 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888777777543   236788999999 7899999999998


Q ss_pred             HHcCCccEEEECCCCCCCC-------CCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           96 EAFGRIDALVNNAGVSGAV-------KSP-LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      +.++++|++|||+|.....       ..+ .+.+.+++...+++|+.+++.+.+.+++.|.++...+++|++||... . 
T Consensus        78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~-  155 (253)
T PRK08217         78 EDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-A-  155 (253)
T ss_pred             HHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-c-
Confidence            8889999999999975321       111 56788999999999999999999999999987544678999998653 2 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                       +.++...|+++|+|++.++++++.++.++||++++++||+++|++.....+ ...... ....|.+++..|+ |+++.+
T Consensus       156 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~-~~~~~~~~~~~~~-~~a~~~  231 (253)
T PRK08217        156 -GNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKP-EALERL-EKMIPVGRLGEPE-EIAHTV  231 (253)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCH-HHHHHH-HhcCCcCCCcCHH-HHHHHH
Confidence             446788999999999999999999999999999999999999998765432 222222 3346888888998 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .||++  ..+++|+++.+|||+++
T Consensus       232 ~~l~~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        232 RFIIE--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             HHHHc--CCCcCCcEEEeCCCccC
Confidence            99995  46899999999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-36  Score=257.59  Aligned_cols=246  Identities=29%  Similarity=0.441  Sum_probs=205.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|++|||||+++||+++++.|+++|++|++++|+. +..++..+.+...   ..++.++.+|++ +.+++.++++++.+.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~~   77 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL---GVEVIFFPADVA-DLSAHEAMLDAAQAA   77 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc---CCceEEEEecCC-CHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999864 3445555555432   236888999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-----CCeEEEEeccccccCCCCC
Q 023555           98 FGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-----EGSVINISSIAATSRGQLP  171 (280)
Q Consensus        98 ~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~g~vv~vsS~~~~~~~~~~  171 (280)
                      ++++|++|||+|...+ ..++.+.+.+++++.+++|+.+++.+++++.+.|.+...     .+++|++||..+..  +.+
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~  155 (256)
T PRK12745         78 WGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--VSP  155 (256)
T ss_pred             cCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--CCC
Confidence            9999999999997532 245667889999999999999999999999999987542     35799999988765  556


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|+++|++++.+++.++.++.++|+++++|+||.+.|++...... ...........|++++..|+ |+++++.+++
T Consensus       156 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-d~a~~i~~l~  233 (256)
T PRK12745        156 NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-KYDALIAKGLVPMPRWGEPE-DVARAVAALA  233 (256)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-hHHhhhhhcCCCcCCCcCHH-HHHHHHHHHh
Confidence            788999999999999999999999999999999999999988654321 11111122246788888898 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++...+++|+.+.+|||++++
T Consensus       234 ~~~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        234 SGDLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             CCcccccCCCEEEECCCeecc
Confidence            988889999999999998864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=255.61  Aligned_cols=243  Identities=31%  Similarity=0.552  Sum_probs=204.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||+++||++++++|+++|++|+++.+ +++..++..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   78 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE---GHDVYAVQADVS-KVEDANRLVEEA   78 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHHHH
Confidence            478999999999999999999999999999987654 456666666666542   236888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||... ...+.+.+.+++++.+++|+.+++.++++++|.|.+.. .+++|++||..+..  +.+++.
T Consensus        79 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~  154 (247)
T PRK12935         79 VNHFGKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQA--GGFGQT  154 (247)
T ss_pred             HHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcC--CCCCCc
Confidence            999999999999999863 34566778899999999999999999999999997644 68999999987765  456788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|++.++++++.++.+.||+++.|+||.++|++...... ...... ....+.+++..|+ |+++.+.|+++. 
T Consensus       155 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~-~~~~~~~~~~~~e-dva~~~~~~~~~-  230 (247)
T PRK12935        155 NYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE-EVRQKI-VAKIPKKRFGQAD-EIAKGVVYLCRD-  230 (247)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH-HHHHHH-HHhCCCCCCcCHH-HHHHHHHHHcCc-
Confidence            999999999999999999999899999999999999988654322 222222 2235677888898 999999999975 


Q ss_pred             CCcccccEEEeCCccc
Q 023555          255 SEYVSGNIFIVDSGAT  270 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~  270 (280)
                      ..+++|+++.+|||+.
T Consensus       231 ~~~~~g~~~~i~~g~~  246 (247)
T PRK12935        231 GAYITGQQLNINGGLY  246 (247)
T ss_pred             ccCccCCEEEeCCCcc
Confidence            4689999999999974

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=7e-37  Score=289.45  Aligned_cols=253  Identities=29%  Similarity=0.410  Sum_probs=213.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +...+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.+..+. ..+..+.+|++ +.++++++++
T Consensus       408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~-~~~~~v~~Dvt-d~~~v~~a~~  485 (676)
T TIGR02632       408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA-GRAVALKMDVT-DEQAVKAAFA  485 (676)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CcEEEEECCCC-CHHHHHHHHH
Confidence            345688999999999999999999999999999999999988888777776543322 25678899999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+++.|++++.+++||++||..+..  +.++
T Consensus       486 ~i~~~~g~iDilV~nAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~--~~~~  562 (676)
T TIGR02632       486 DVALAYGGVDIVVNNAGIA-TSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY--AGKN  562 (676)
T ss_pred             HHHHhcCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC--CCCC
Confidence            9999999999999999975 335677888999999999999999999999999998755468999999988766  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc--cccCcc----------chhhhhhhhhcCCCCCCCCCCh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE--ITEGLM----------KKDWLNNVASRTYPLRDFGTTD  240 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~--~~~~~~----------~~~~~~~~~~~~~p~~~~~~~~  240 (280)
                      ...|++||++++.++++++.+++++||+||+|+||.+.++  +.....          ......+......|+++..+|+
T Consensus       563 ~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe  642 (676)
T TIGR02632       563 ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA  642 (676)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence            8999999999999999999999999999999999998643  221110          0112223344457899999998


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                       |+++++.||+++...++||+++.+|||++-
T Consensus       643 -DVA~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       643 -DIAEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             -HHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence             999999999998889999999999999764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.6e-36  Score=254.27  Aligned_cols=241  Identities=29%  Similarity=0.487  Sum_probs=204.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |++|||||+++||+++++.|+++|++|+++.| +.+..++..+++...   ..++.++.+|++ +.++++++++++.+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   76 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL---GFDFRVVEGDVS-SFESCKAAVAKVEAEL   76 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh---CCceEEEEecCC-CHHHHHHHHHHHHHHc
Confidence            78999999999999999999999999999888 555555555554332   236888999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||+|... ...+.+.+.+++++.+++|+.+++.+++++++.|++.+ .++||++||..+..  +.+++..|++
T Consensus        77 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~--~~~~~~~y~~  152 (242)
T TIGR01829        77 GPIDVLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQK--GQFGQTNYSA  152 (242)
T ss_pred             CCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC--CCCCcchhHH
Confidence            99999999999763 34566788999999999999999999999999998744 68999999987765  5578889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcc
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYV  258 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i  258 (280)
                      +|++++.+++.++.++.++||+++.+.||++.|++..... +.....+. ...|+.+...|+ ++++.+.||+++...++
T Consensus       153 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~-~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~  229 (242)
T TIGR01829       153 AKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR-EDVLNSIV-AQIPVGRLGRPE-EIAAAVAFLASEEAGYI  229 (242)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc-hHHHHHHH-hcCCCCCCcCHH-HHHHHHHHHcCchhcCc
Confidence            9999999999999999999999999999999999876443 22232332 236888888898 99999999999888899


Q ss_pred             cccEEEeCCcccC
Q 023555          259 SGNIFIVDSGATL  271 (280)
Q Consensus       259 ~G~~i~vdgG~~~  271 (280)
                      +|+++.+|||+++
T Consensus       230 ~G~~~~~~gg~~~  242 (242)
T TIGR01829       230 TGATLSINGGLYM  242 (242)
T ss_pred             cCCEEEecCCccC
Confidence            9999999999853

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.5e-38  Score=251.43  Aligned_cols=233  Identities=25%  Similarity=0.430  Sum_probs=195.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++||.+++|||.+|||++++++|+++|..+.+++.+.|+.+. .+++++.. +...+.+++||++ +++++++.++++
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~-p~~~v~F~~~DVt-~~~~~~~~f~ki   77 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAIN-PSVSVIFIKCDVT-NRGDLEAAFDKI   77 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccC-CCceEEEEEeccc-cHHHHHHHHHHH
Confidence            46899999999999999999999999999999988888887554 45565554 4568999999999 699999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ...+|.+|++||+||+.         +..+|++.+.+|+.|.++-++..+|+|.+++  ++|-|||+||+.+..  |.|.
T Consensus        78 ~~~fg~iDIlINgAGi~---------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~--P~p~  146 (261)
T KOG4169|consen   78 LATFGTIDILINGAGIL---------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD--PMPV  146 (261)
T ss_pred             HHHhCceEEEEcccccc---------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC--cccc
Confidence            99999999999999986         3577999999999999999999999998866  678999999999988  7899


Q ss_pred             CCCChhhHHHHHHHHHHHHHHh--CCCCeEEEEeecCcccCccccCccc-------hhhhhhhhhcCCCCCCCCCChHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLEL--GVHKIRVNSICPGLFKSEITEGLMK-------KDWLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~--~~~gi~vn~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      .+.|++||+++.+|+|++|...  .+.||++++|+||++.|++...+..       .+...+.+.. .|   ...|. ++
T Consensus       147 ~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~-~~---~q~~~-~~  221 (261)
T KOG4169|consen  147 FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALER-AP---KQSPA-CC  221 (261)
T ss_pred             chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHH-cc---cCCHH-HH
Confidence            9999999999999999988765  4679999999999999998776522       2223333322 22   22344 77


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      +..+...+..   ..||+.+.+|.|.
T Consensus       222 a~~~v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  222 AINIVNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHHHhh---ccCCcEEEEecCc
Confidence            7777666643   7899999999997

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=265.83  Aligned_cols=225  Identities=27%  Similarity=0.346  Sum_probs=191.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++++.|+++|++|++++|+++.++++.+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~---g~~~~~~~~Dv~-d~~~v~~~~~~~   78 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL---GAEVLVVPTDVT-DADQVKALATQA   78 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEeeCC-CHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999888887653   346778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. ...++.+.+.+++++.+++|+.+++.++++++|+|++++ .|+||+++|..+..  +.|++.
T Consensus        79 ~~~~g~iD~lVnnAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~--~~p~~~  154 (330)
T PRK06139         79 ASFGGRIDVWVNNVGVG-AVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFA--AQPYAA  154 (330)
T ss_pred             HHhcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcC--CCCCch
Confidence            99999999999999986 446778899999999999999999999999999998754 68999999988776  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCC-CeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVH-KIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~-gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|++||+|+.+|+++++.|+.+. ||+|++|+||+++|++.......  ..   ....+.....+|+ ++|+.+++++..
T Consensus       155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~--~~---~~~~~~~~~~~pe-~vA~~il~~~~~  228 (330)
T PRK06139        155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY--TG---RRLTPPPPVYDPR-RVAKAVVRLADR  228 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc--cc---ccccCCCCCCCHH-HHHHHHHHHHhC
Confidence            99999999999999999999874 99999999999999986432110  00   0112333456777 999999888753

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-36  Score=256.18  Aligned_cols=227  Identities=19%  Similarity=0.267  Sum_probs=189.6

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+++||||++|||+++|++|+ +|++|++++|+.+++++..+++.+..+  ..+.++.+|++ +.++++++++++.+.+|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGA--TSVHVLSFDAQ-DLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccC--CceEEEEcccC-CHHHHHHHHHHHHHhcC
Confidence            579999999999999999999 599999999999999988888865432  24678899999 78999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++|||||.... .+..+.+.+++.+.+++|+.+.+.+++.++|.|.+++.+|+||++||..+..  +.+++..|++|
T Consensus        77 ~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~as  153 (246)
T PRK05599         77 EISLAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR--ARRANYVYGST  153 (246)
T ss_pred             CCCEEEEecCcCCC-chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc--CCcCCcchhhH
Confidence            99999999998643 3344567778889999999999999999999997654468999999998876  56788999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCccc
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVS  259 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~  259 (280)
                      |+|+++|+++++.|++++||+||+|+||+++|++.....+           .|.  ..+|+ |+|+.+.++++....   
T Consensus       154 Kaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~-----------~~~--~~~pe-~~a~~~~~~~~~~~~---  216 (246)
T PRK05599        154 KAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP-----------APM--SVYPR-DVAAAVVSAITSSKR---  216 (246)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC-----------CCC--CCCHH-HHHHHHHHHHhcCCC---
Confidence            9999999999999999999999999999999998643211           111  24677 999999999875432   


Q ss_pred             ccEEEeCCccc
Q 023555          260 GNIFIVDSGAT  270 (280)
Q Consensus       260 G~~i~vdgG~~  270 (280)
                      ++.+.++++..
T Consensus       217 ~~~~~~~~~~~  227 (246)
T PRK05599        217 STTLWIPGRLR  227 (246)
T ss_pred             CceEEeCccHH
Confidence            45677777753

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-36  Score=254.68  Aligned_cols=248  Identities=29%  Similarity=0.454  Sum_probs=209.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|+++||||+++||+++++.|+++|++|++++|+.+.++.+.+++.     ..++..+.+|++ +.+++.++++++.+.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   75 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-----DARFVPVACDLT-DAASLAAALANAAAER   75 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCC-CHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999999999888877766652     236778899999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++||++|...+ .++.+.+.++|.+.+++|+.+++.+++++++.+.+++ .+++|++||..+..   ..+...|+.
T Consensus        76 ~~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~---~~~~~~y~~  150 (257)
T PRK07074         76 GPVDVLVANAGAARA-ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMA---ALGHPAYSA  150 (257)
T ss_pred             CCCCEEEECCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcC---CCCCcccHH
Confidence            999999999998633 4566788999999999999999999999999997654 68999999976543   235678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--chhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      +|++++.++++++.+++++||+|++++||++.|++.....  ........ ....|++++..++ |+++++.+|+++...
T Consensus       151 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-d~a~~~~~l~~~~~~  228 (257)
T PRK07074        151 AKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEEL-KKWYPLQDFATPD-DVANAVLFLASPAAR  228 (257)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHH-HhcCCCCCCCCHH-HHHHHHHHHcCchhc
Confidence            9999999999999999999999999999999998754321  11222222 2346888999998 999999999998888


Q ss_pred             cccccEEEeCCcccCCCCCCCCC
Q 023555          257 YVSGNIFIVDSGATLPGLPIFSS  279 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~~~~~~~~~  279 (280)
                      +++|+.+.+|||++......+++
T Consensus       229 ~~~g~~~~~~~g~~~~~~~~~~~  251 (257)
T PRK07074        229 AITGVCLPVDGGLTAGNREMART  251 (257)
T ss_pred             CcCCcEEEeCCCcCcCChhhhhh
Confidence            99999999999999877666554

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=257.97  Aligned_cols=231  Identities=19%  Similarity=0.321  Sum_probs=190.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...   +.++.++.+|++ +.+++++++++
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~---~~~~~~~~~Dv~-d~~~v~~~~~~   76 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE---GFDVHGVMCDVR-HREEVTHLADE   76 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEeCCCC-CHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888887777543   336778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.+|++|++|||||.. ..+++.+.+.++|++.+++|+.+++.++++++|.|.+++.+|+||++||..+..  +.++.
T Consensus        77 ~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~--~~~~~  153 (275)
T PRK05876         77 AFRLLGHVDVVFSNAGIV-VGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV--PNAGL  153 (275)
T ss_pred             HHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc--CCCCC
Confidence            999999999999999985 446778899999999999999999999999999998765468999999988876  66788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh---hhhh---hhhcCCC-CCCCCCChHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD---WLNN---VASRTYP-LRDFGTTDPALTSL  246 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~---~~~~---~~~~~~p-~~~~~~~~~~va~~  246 (280)
                      ..|++||+|+.+|+++++.|++++||+|++|+||+++|++........   ....   ......| ...+..|+ ++|+.
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  232 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVD-DIAQL  232 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHH-HHHHH
Confidence            999999999999999999999999999999999999999864321100   0000   0000011 23356777 99988


Q ss_pred             HHHhhc
Q 023555          247 VRYLVH  252 (280)
Q Consensus       247 ~~~l~s  252 (280)
                      ++..+.
T Consensus       233 ~~~ai~  238 (275)
T PRK05876        233 TADAIL  238 (275)
T ss_pred             HHHHHH
Confidence            765553

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.2e-36  Score=250.65  Aligned_cols=244  Identities=37%  Similarity=0.576  Sum_probs=210.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||+++||+++++.|+++|++|+++ +|+.+..+...+.+...   +.++.++.+|++ +.+++.++++++
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   77 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE---GGDAIAVKADVS-SEEDVENLVEQI   77 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHHHH
Confidence            5789999999999999999999999999999998 99888877777776542   236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++||++|.. ...+..+.+.+++++.+++|+.+++.+++++.+.+.+++ .+++|++||..+..  +.+...
T Consensus        78 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~--~~~~~~  153 (247)
T PRK05565         78 VEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLI--GASCEV  153 (247)
T ss_pred             HHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhcc--CCCCcc
Confidence            99999999999999986 445667789999999999999999999999999997654 68999999987765  456778


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.++++++.+++.+|+++++|+||+++|++.+..... ....+.. ..+..++.+|+ ++++.+.+++++.
T Consensus       154 ~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~-~va~~~~~l~~~~  230 (247)
T PRK05565        154 LYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-DKEGLAE-EIPLGRLGKPE-EIAKVVLFLASDD  230 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH-HHHHHHh-cCCCCCCCCHH-HHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999999987654432 1122221 35667778888 9999999999999


Q ss_pred             CCcccccEEEeCCccc
Q 023555          255 SEYVSGNIFIVDSGAT  270 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~  270 (280)
                      ...++|+++.+|+|++
T Consensus       231 ~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        231 ASYITGQIITVDGGWT  246 (247)
T ss_pred             cCCccCcEEEecCCcc
Confidence            9999999999999975

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.1e-35  Score=250.41  Aligned_cols=247  Identities=32%  Similarity=0.567  Sum_probs=211.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.+++....+++.+..   .++.++.+|++ +.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~-~~~~~~~~~~~~~   78 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG---GKARARQVDVR-DRAALKAAVAAGV   78 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCC-CHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999888777777765432   25778999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc-cCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT-SRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~-~~~~~~~~~  174 (280)
                      +.++++|++||++|... ..++.+.+.+++++.++.|+.+++.+++++++.|.+++ .+++|++||..+. .  +.++..
T Consensus        79 ~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~--~~~~~~  154 (251)
T PRK12826         79 EDFGRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRV--GYPGLA  154 (251)
T ss_pred             HHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhcc--CCCCcc
Confidence            99999999999999864 35667788999999999999999999999999997755 6899999998776 3  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.+++.++.++.+.|++++.++||.+.|+.........+. .......|.+++..++ |+++.+.++++..
T Consensus       155 ~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  232 (251)
T PRK12826        155 HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWA-EAIAAAIPLGRLGEPE-DIAAAVLFLASDE  232 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            9999999999999999999998899999999999999876544332212 2233346777888888 9999999999888


Q ss_pred             CCcccccEEEeCCcccCC
Q 023555          255 SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~  272 (280)
                      ..+++|+++.+|||..+.
T Consensus       233 ~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        233 ARYITGQTLPVDGGATLP  250 (251)
T ss_pred             ccCcCCcEEEECCCccCC
Confidence            889999999999998763

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.6e-36  Score=262.13  Aligned_cols=241  Identities=21%  Similarity=0.250  Sum_probs=193.9

Q ss_pred             EEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           23 MVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        23 lItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      |||||++|||++++++|+++| ++|++++|+.+++++..+++..   ...++.++.+|++ +.++++++++++.+.++++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~-d~~~v~~~~~~~~~~~~~i   76 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM---PKDSYTVMHLDLA-SLDSVRQFVDNFRRSGRPL   76 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC---CCCeEEEEEecCC-CHHHHHHHHHHHHhcCCCC
Confidence            699999999999999999999 9999999998888777776642   1236778899999 7899999999999888999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEeccccccC-------------
Q 023555          102 DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINISSIAATSR-------------  167 (280)
Q Consensus       102 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vsS~~~~~~-------------  167 (280)
                      |++|||||+.....+..+.+.++|++.+++|+.+++.++++++|.|.+.+. +|+||++||..+...             
T Consensus        77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  156 (308)
T PLN00015         77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG  156 (308)
T ss_pred             CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence            999999998544345567889999999999999999999999999986431 489999999865321             


Q ss_pred             --------------------CCCCCCCCChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcc-cCccccCccchh-hhh
Q 023555          168 --------------------GQLPGGVAYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLF-KSEITEGLMKKD-WLN  224 (280)
Q Consensus       168 --------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v-~t~~~~~~~~~~-~~~  224 (280)
                                          ...+++..|++||+|+..+++.+++++.+ +||+||+|+||+| .|++.+...... +..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~  236 (308)
T PLN00015        157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLF  236 (308)
T ss_pred             hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHH
Confidence                                00124567999999999999999999975 6999999999999 788865432111 000


Q ss_pred             hhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          225 NVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       225 ~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      .... ..+.+++.+|+ +.|+.+.+|+++.....+|+++..||+.
T Consensus       237 ~~~~-~~~~~~~~~pe-~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        237 PPFQ-KYITKGYVSEE-EAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHH-HHHhcccccHH-HhhhhhhhhccccccCCCccccccCCcc
Confidence            1111 24556778888 9999999999988778999999998874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.7e-36  Score=273.43  Aligned_cols=242  Identities=24%  Similarity=0.384  Sum_probs=202.1

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ...+++|++|||||++|||+++++.|+++|++|+++++..  +.+++..+++        ....+.+|++ +.+++++++
T Consensus       205 ~~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~--------~~~~~~~Dv~-~~~~~~~~~  275 (450)
T PRK08261        205 DRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV--------GGTALALDIT-APDAPARIA  275 (450)
T ss_pred             ccCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc--------CCeEEEEeCC-CHHHHHHHH
Confidence            3467899999999999999999999999999999998843  3333333322        2346789999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +.+.+.++++|++|||||+.. ...+.+.+.++|+..+++|+.+++.+.+++.+.+..+ ++++||++||..+..  +.+
T Consensus       276 ~~~~~~~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~g~iv~~SS~~~~~--g~~  351 (450)
T PRK08261        276 EHLAERHGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-DGGRIVGVSSISGIA--GNR  351 (450)
T ss_pred             HHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-CCCEEEEECChhhcC--CCC
Confidence            999999999999999999863 4567788999999999999999999999999965543 368999999988765  557


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ++..|+++|+++++|+++++.++.++||++|+|+||+++|++.......  ..+......++.+...|+ |+++++.||+
T Consensus       352 ~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~--~~~~~~~~~~l~~~~~p~-dva~~~~~l~  428 (450)
T PRK08261        352 GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA--TREAGRRMNSLQQGGLPV-DVAETIAWLA  428 (450)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh--HHHHHhhcCCcCCCCCHH-HHHHHHHHHh
Confidence            8899999999999999999999999999999999999999987654221  112222335677778888 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccC
Q 023555          252 HDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++.+.++||++|.+|||-.+
T Consensus       429 s~~~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        429 SPASGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             ChhhcCCCCCEEEECCCccc
Confidence            99999999999999998654

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=248.86  Aligned_cols=243  Identities=32%  Similarity=0.538  Sum_probs=202.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec----ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR----RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++++|+++||||+++||+++|+.|+++|++|++++|    +.+..++..+++...   +.++.++.+|++ +.++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~   77 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA---GGKALGLAFDVR-DFAATRAA   77 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHH
Confidence            3578899999999999999999999999999998765    344455555555432   236788999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH-HHHHhcCCCCeEEEEeccccccCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVC-IRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      ++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++++. +.|++ ...+++|++||..+..  +
T Consensus        78 ~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~iv~~sS~~~~~--~  153 (249)
T PRK12827         78 LDAGVEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRA-RRGGRIVNIASVAGVR--G  153 (249)
T ss_pred             HHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCCeEEEEECCchhcC--C
Confidence            9999998899999999999863 3567788899999999999999999999999 55554 3468999999988765  5


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .+++..|+.+|++++.+++.++.++.+.|+++++++||+++|++.......    .......|..+...++ +++..+.+
T Consensus       154 ~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~-~va~~~~~  228 (249)
T PRK12827        154 NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPD-EVAALVAF  228 (249)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCCcCCcCHH-HHHHHHHH
Confidence            578889999999999999999999998999999999999999986654322    1222335667777787 99999999


Q ss_pred             hhcCCCCcccccEEEeCCccc
Q 023555          250 LVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ++++...+++|+++.+|||+.
T Consensus       229 l~~~~~~~~~g~~~~~~~g~~  249 (249)
T PRK12827        229 LVSDAASYVTGQVIPVDGGFC  249 (249)
T ss_pred             HcCcccCCccCcEEEeCCCCC
Confidence            999888999999999999973

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-35  Score=249.61  Aligned_cols=243  Identities=29%  Similarity=0.420  Sum_probs=198.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ....+|++|||||++|||+++++.|+++|++|+++++. .+.++.+.+++...   +.++.++.+|++ +.+++++++++
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-d~~~~~~~~~~   80 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL---GRRAVALQADLA-DEAEVRALVAR   80 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeEEEEEcCCC-CHHHHHHHHHH
Confidence            34578999999999999999999999999999887664 55566666665432   236778999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++++.+.|.+.. .+++|+++|..+..  +.|++
T Consensus        81 ~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~--~~p~~  156 (258)
T PRK09134         81 ASAALGPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWN--LNPDF  156 (258)
T ss_pred             HHHHcCCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcC--CCCCc
Confidence            9998999999999999763 34667889999999999999999999999999997643 68999999876654  45677


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||++++.++++++.++.+. |+|++|+||++.|.....  ...+ ... ....++++...|+ |+|+.+.++++ 
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~--~~~~-~~~-~~~~~~~~~~~~~-d~a~~~~~~~~-  229 (258)
T PRK09134        157 LSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS--PEDF-ARQ-HAATPLGRGSTPE-EIAAAVRYLLD-  229 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC--hHHH-HHH-HhcCCCCCCcCHH-HHHHHHHHHhc-
Confidence            789999999999999999999875 999999999998864321  1111 222 2235777888888 99999999997 


Q ss_pred             CCCcccccEEEeCCcccCCC
Q 023555          254 SSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~~  273 (280)
                       ..+++|+.+.+|||.++.-
T Consensus       230 -~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        230 -APSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             -CCCcCCCEEEECCCeeccc
Confidence             3578999999999986543

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-36  Score=262.94  Aligned_cols=241  Identities=25%  Similarity=0.341  Sum_probs=200.1

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +.++++|+++||||++|||+++++.|+++|++|++++|+++.+++..+++.+.   +.++.++.+|++ +.+++++++++
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~---g~~~~~v~~Dv~-d~~~v~~~~~~   78 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA---GGEALAVVADVA-DAEAVQAAADR   78 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc---CCcEEEEEecCC-CHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888887653   346888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+.+
T Consensus        79 ~~~~~g~iD~lInnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~--~~~~~  154 (334)
T PRK07109         79 AEEELGPIDTWVNNAMVT-VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYR--SIPLQ  154 (334)
T ss_pred             HHHHCCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhcc--CCCcc
Confidence            999999999999999975 345677889999999999999999999999999998754 68999999998876  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCC--CCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          174 VAYASSKAGLNAMTKCLSLELGV--HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~--~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ..|+++|+++++|+++++.|+..  .+|+|++|+||.++|++.....  ..   ......|..+..+|+ ++|+.+.+++
T Consensus       155 ~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~--~~---~~~~~~~~~~~~~pe-~vA~~i~~~~  228 (334)
T PRK07109        155 SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR--SR---LPVEPQPVPPIYQPE-VVADAILYAA  228 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh--hh---ccccccCCCCCCCHH-HHHHHHHHHH
Confidence            89999999999999999999975  4799999999999998754221  11   111223556677888 9999999998


Q ss_pred             cCCC--CcccccEEEeCCc
Q 023555          252 HDSS--EYVSGNIFIVDSG  268 (280)
Q Consensus       252 s~~~--~~i~G~~i~vdgG  268 (280)
                      +...  .++.+....++.+
T Consensus       229 ~~~~~~~~vg~~~~~~~~~  247 (334)
T PRK07109        229 EHPRRELWVGGPAKAAILG  247 (334)
T ss_pred             hCCCcEEEeCcHHHHHHHH
Confidence            7542  2445554444443

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=247.47  Aligned_cols=232  Identities=22%  Similarity=0.365  Sum_probs=193.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|+++||||+++||+++++.|+++|++|++++|+.+..      .        ...++.+|++ +.++++++++++.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~--------~~~~~~~D~~-~~~~~~~~~~~~~~   65 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F--------PGELFACDLA-DIEQTAATLAQINE   65 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c--------CceEEEeeCC-CHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999986530      0        1235789999 78999999999888


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .+ ++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.++++|.|++.+ .++||++||....   +.++...|
T Consensus        66 ~~-~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~---~~~~~~~Y  139 (234)
T PRK07577         66 IH-PVDAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF---GALDRTSY  139 (234)
T ss_pred             hC-CCcEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc---CCCCchHH
Confidence            76 6899999999863 35666778999999999999999999999999998754 6899999997532   34677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      +++|++++.++++++.+++++||++++|+||+++|++.....+ .+..........|+++...|+ |+++.+.+|+++..
T Consensus       140 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~  218 (234)
T PRK07577        140 SAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPE-EVAAAIAFLLSDDA  218 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999998654321 111112222236778888888 99999999999888


Q ss_pred             CcccccEEEeCCccc
Q 023555          256 EYVSGNIFIVDSGAT  270 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~  270 (280)
                      .+++|+.+.+|||.+
T Consensus       219 ~~~~g~~~~~~g~~~  233 (234)
T PRK07577        219 GFITGQVLGVDGGGS  233 (234)
T ss_pred             CCccceEEEecCCcc
Confidence            899999999999975

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=8e-35  Score=244.54  Aligned_cols=245  Identities=35%  Similarity=0.580  Sum_probs=205.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||+++||+++++.|+++|++|+++.|+.. ..+...+++...   ..++..+.+|++ +.+++.++++++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~   77 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL---GGKALAVQGDVS-DAESVERAVDEA   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHHHHH
Confidence            578999999999999999999999999999988887654 355555555432   346788899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++||++|... ..+..+.+.+++++.+++|+.+++.+.+++.+.+.+.+ .+++|++||..+..  +.++..
T Consensus        78 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~--~~~~~~  153 (248)
T PRK05557         78 KAEFGGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLM--GNPGQA  153 (248)
T ss_pred             HHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCc--CCCCCc
Confidence            998999999999999863 34556788999999999999999999999999997643 57999999987655  456788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.+++.++.++...|+++++++||+++|++..... ....... ....|.+++..++ ++++.+.+|+++.
T Consensus       154 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~-~va~~~~~l~~~~  230 (248)
T PRK05557        154 NYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP-EDVKEAI-LAQIPLGRLGQPE-EIASAVAFLASDE  230 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC-hHHHHHH-HhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999998866542 2222222 2335777788888 9999999999888


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ..+++|+.+.+|||+++
T Consensus       231 ~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        231 AAYITGQTLHVNGGMVM  247 (248)
T ss_pred             cCCccccEEEecCCccC
Confidence            88999999999999886

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=5.1e-35  Score=245.89  Aligned_cols=242  Identities=27%  Similarity=0.429  Sum_probs=201.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEE-EecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |++|||||+++||++++++|+++|++|++ ..|+.+..++...++...   +.++..+.+|++ +.++++++++++.+.+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-d~~~i~~~~~~~~~~~   77 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA---GGKAFVLQADIS-DENQVVAMFTAIDQHD   77 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC---CCeEEEEEccCC-CHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999976 467777777666666442   235778899999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCCC-CCC
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPG-GVA  175 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~~-~~~  175 (280)
                      +++|++|||+|......+..+.+.++++..+++|+.+++.+++++++.|.+..  .+|++|++||..+..  +.++ +..
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~--~~~~~~~~  155 (247)
T PRK09730         78 EPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL--GAPGEYVD  155 (247)
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcc--CCCCcccc
Confidence            99999999999764555677889999999999999999999999999997642  357899999987765  3343 468


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|++++.+++.++.++.++||++++++||.+.|++......+..... .....|+.+...|+ |+++.+.|++++..
T Consensus       156 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~~~~~~~  233 (247)
T PRK09730        156 YAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDR-VKSNIPMQRGGQPE-EVAQAIVWLLSDKA  233 (247)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHH-HHhcCCCCCCcCHH-HHHHHHHhhcChhh
Confidence            99999999999999999999999999999999999997543222222222 22336777777888 99999999999888


Q ss_pred             CcccccEEEeCCcc
Q 023555          256 EYVSGNIFIVDSGA  269 (280)
Q Consensus       256 ~~i~G~~i~vdgG~  269 (280)
                      .+++|+++.+|||.
T Consensus       234 ~~~~g~~~~~~g~~  247 (247)
T PRK09730        234 SYVTGSFIDLAGGK  247 (247)
T ss_pred             cCccCcEEecCCCC
Confidence            89999999999983

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.5e-35  Score=246.03  Aligned_cols=234  Identities=25%  Similarity=0.407  Sum_probs=198.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC-CHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA-NGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~   94 (280)
                      .+++|+++||||+++||.++++.|++.|++|++++|+.++++...+++.+....  ++.++.+|++. +.++++++++.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP--QPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCC--CceEEEecccCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999999999998888877777654332  34455556642 578899999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||......++.+.+.+++++.+++|+.+++.++++++++|.+.+ .++||++||..+..  +.+++.
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~--~~~~~~  163 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQ--GRANWG  163 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcC--CCCCCc
Confidence            999999999999999865555677888999999999999999999999999998754 68999999987765  557888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||++++.|++.++.++...||+++++.||+++|++.....+.          .+..++.+|+ |+++.+.|++++.
T Consensus       164 ~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~  232 (247)
T PRK08945        164 AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG----------EDPQKLKTPE-DIMPLYLYLMGDD  232 (247)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc----------ccccCCCCHH-HHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999875432211          1123456787 9999999999999


Q ss_pred             CCcccccEEEe
Q 023555          255 SEYVSGNIFIV  265 (280)
Q Consensus       255 ~~~i~G~~i~v  265 (280)
                      ..+++|+++..
T Consensus       233 ~~~~~g~~~~~  243 (247)
T PRK08945        233 SRRKNGQSFDA  243 (247)
T ss_pred             ccccCCeEEeC
Confidence            99999998754

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=251.30  Aligned_cols=244  Identities=26%  Similarity=0.332  Sum_probs=203.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+++....+  ....+..+|++ +.++++++++++.+.++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~-~~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG--TVPEHRALDIS-DYDAVAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEeeCC-CHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999999999998888888777765322  23455789999 78999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++|||+|.. ...++.+.+.+++++.+++|+.+++.++++++|.|.+.+..|+||++||..+..  +.+++..|+++
T Consensus        78 ~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~Y~~s  154 (272)
T PRK07832         78 SMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSAS  154 (272)
T ss_pred             CCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC--CCCCCcchHHH
Confidence            999999999975 345677889999999999999999999999999997654468999999987765  56788899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc------chhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM------KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      |+++.+|+++++.|+.++||+|++|+||.++|++.....      .++....+..  ...++..+|+ ++|+.+.+++. 
T Consensus       155 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~vA~~~~~~~~-  230 (272)
T PRK07832        155 KFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD--RFRGHAVTPE-KAAEKILAGVE-  230 (272)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH--hcccCCCCHH-HHHHHHHHHHh-
Confidence            999999999999999999999999999999999865431      1111111111  1234567888 99999999995 


Q ss_pred             CCCcccccEEEeCCcccCCC
Q 023555          254 SSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ..++++++.+.+++|+.+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~  250 (272)
T PRK07832        231 KNRYLVYTSPDIRALYWFKR  250 (272)
T ss_pred             cCCeEEecCcchHHHHHHHh
Confidence            67899999999999977653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.5e-35  Score=245.70  Aligned_cols=247  Identities=29%  Similarity=0.461  Sum_probs=201.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      |+++++|++|||||+++||++++++|+++|++|++..|+ .+......+.+.+.   +.++..+.+|++ +.++++++++
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~   76 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN---GGEGIGVLADVS-TREGCETLAK   76 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc---CCeeEEEEeccC-CHHHHHHHHH
Confidence            356889999999999999999999999999998877754 44444444444432   235778899999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||||.. ...+..+.+.+++++.+++|+.+.+.+++++.++|++   .+++|++||..+..  +.++
T Consensus        77 ~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~--~~~~  150 (252)
T PRK06077         77 ATIDRYGVADILVNNAGLG-LFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIR--PAYG  150 (252)
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccC--CCCC
Confidence            9999999999999999985 3356667888999999999999999999999999965   47999999988766  6678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-h-hhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-D-WLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-~-~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +..|+++|++++.++++++.++++ +++++.+.||+++|++....... . ..........+.+++..|+ |+++.+.++
T Consensus       151 ~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~  228 (252)
T PRK06077        151 LSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPE-EVAEFVAAI  228 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHH-HHHHHHHHH
Confidence            889999999999999999999988 89999999999999976432210 0 0111122224566788898 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      ++.  ..++|+.+.+|+|+++.+.
T Consensus       229 ~~~--~~~~g~~~~i~~g~~~~~~  250 (252)
T PRK06077        229 LKI--ESITGQVFVLDSGESLKGG  250 (252)
T ss_pred             hCc--cccCCCeEEecCCeeccCC
Confidence            863  4689999999999998764

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.7e-35  Score=250.72  Aligned_cols=222  Identities=31%  Similarity=0.420  Sum_probs=185.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +++|+++||||++|||++++++|+++|++|++++|+.++++++.+         ..+.++.+|++ +.++++++++++.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---------~~~~~~~~Dv~-~~~~~~~~~~~~~~   70 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---------LGVHPLSLDVT-DEASIKAAVDTIIA   70 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---------CCCeEEEeeCC-CHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999877654321         13667899999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||||.. ...++.+.+.++++..+++|+.+++.+++.++|.|++.+ .|+||++||..+..  +.+....|
T Consensus        71 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  146 (273)
T PRK06182         71 EEGRIDVLVNNAGYG-SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKI--YTPLGAWY  146 (273)
T ss_pred             hcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcC--CCCCccHh
Confidence            999999999999985 446677889999999999999999999999999998754 68999999987755  45667789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--------ch---h---hhhhhhhcCCCCCCCCCChHH
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--------KK---D---WLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--------~~---~---~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      ++||+++++|+++++.|+.++||+|++|+||+++|++.....        ..   +   ...+......+.++..+|+ +
T Consensus       147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  225 (273)
T PRK06182        147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPS-V  225 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHH-H
Confidence            999999999999999999999999999999999999753110        00   0   0111222334677888998 9


Q ss_pred             HHHHHHHhhcC
Q 023555          243 LTSLVRYLVHD  253 (280)
Q Consensus       243 va~~~~~l~s~  253 (280)
                      +|+.+.++++.
T Consensus       226 vA~~i~~~~~~  236 (273)
T PRK06182        226 IADAISKAVTA  236 (273)
T ss_pred             HHHHHHHHHhC
Confidence            99999999874

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=245.31  Aligned_cols=248  Identities=27%  Similarity=0.463  Sum_probs=206.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +.++++|++|||||+++||+++++.|+++|++|++++|+.+..+++.++..+     .++..+.+|++ +.+++++++++
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~-~~~~~~~~~~~   79 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-----AKVTATVADVA-DPAQVERVFDT   79 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-----CceEEEEccCC-CHHHHHHHHHH
Confidence            3468999999999999999999999999999999999998777766555432     15688899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++||++|...........+.+++++.+++|+.+++.+++++++.|...+.+++++++||..+..  +.+++
T Consensus        80 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~--~~~~~  157 (264)
T PRK12829         80 AVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL--GYPGR  157 (264)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc--CCCCC
Confidence            9999999999999999874555667889999999999999999999999999987754337899998877655  56778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---------hhhhhhhhcCCCCCCCCCChHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      ..|+.+|++++.+++.++.++...++++++++||++.|++.......         ...........|.+++..++ +++
T Consensus       158 ~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a  236 (264)
T PRK12829        158 TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPE-DIA  236 (264)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHH-HHH
Confidence            89999999999999999999988899999999999999876433211         01111122235777788888 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCccc
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +.+.+++++...+++|+.+.+|||..
T Consensus       237 ~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        237 ATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHHHcCccccCccCcEEEeCCCcc
Confidence            99999998777889999999999975

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=241.91  Aligned_cols=236  Identities=27%  Similarity=0.384  Sum_probs=199.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.++..+..+++...     ....+.+|++ +.++++++++++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~-~~~~~~~~~~~~   76 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD-----ALRIGGIDLV-DPQAARRAVDEV   76 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc-----CceEEEeecC-CHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999987766655555331     3556789999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++||++|... .....+.+.+++++.+++|+.+++.+++++.+.|.+.+ .+++|++||..+..  +.+...
T Consensus        77 ~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~  152 (239)
T PRK12828         77 NRQFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALK--AGPGMG  152 (239)
T ss_pred             HHHhCCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhcc--CCCCcc
Confidence            999999999999999753 34556778999999999999999999999999997644 68999999988765  556788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.+++.++.++...|++++.+.||.+.|++.......          .++..+..++ |++.++.+++++.
T Consensus       153 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~-dva~~~~~~l~~~  221 (239)
T PRK12828        153 AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPE-QIAAVIAFLLSDE  221 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHH-HHHHHHHHHhCcc
Confidence            9999999999999999999988899999999999999854321111          1233456677 9999999999987


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ..+++|+.+.+|||+++
T Consensus       222 ~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        222 AQAITGASIPVDGGVAL  238 (239)
T ss_pred             cccccceEEEecCCEeC
Confidence            78999999999999875

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=7.4e-35  Score=253.83  Aligned_cols=243  Identities=22%  Similarity=0.290  Sum_probs=191.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.       .+.++.+|++ +.++++++++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-------~v~~~~~Dl~-d~~~v~~~~~~~   93 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-------GVEVVMLDLA-DLESVRAFAERF   93 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-------hCeEEEccCC-CHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888877766653       3667899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC-------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR-------  167 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~-------  167 (280)
                      .+.++++|+||||||....   ....+.++|+..+++|+.+++.++++++|.|.+.+ .++||++||..+...       
T Consensus        94 ~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~  169 (315)
T PRK06196         94 LDSGRRIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDP  169 (315)
T ss_pred             HhcCCCCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCcccc
Confidence            9999999999999997532   23456788999999999999999999999998753 589999999754321       


Q ss_pred             ---CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhh-hhhh-cCCCCC-CCCCChH
Q 023555          168 ---GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN-NVAS-RTYPLR-DFGTTDP  241 (280)
Q Consensus       168 ---~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~-~~~~-~~~p~~-~~~~~~~  241 (280)
                         .+.+++..|+.||++++.|++.++.++.++||+||+|+||++.|++........... .+.. ...|+. ++.+|+ 
T Consensus       170 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  248 (315)
T PRK06196        170 HFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPA-  248 (315)
T ss_pred             CccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHh-
Confidence               123345689999999999999999999999999999999999999875543221110 1111 112333 467787 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ++|..+.||++......+|..+..|++..
T Consensus       249 ~~a~~~~~l~~~~~~~~~~g~~~~~~~~~  277 (315)
T PRK06196        249 QGAATQVWAATSPQLAGMGGLYCEDCDIA  277 (315)
T ss_pred             HHHHHHHHHhcCCccCCCCCeEeCCCccc
Confidence            99999999997544444455566665443

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=251.22  Aligned_cols=247  Identities=21%  Similarity=0.216  Sum_probs=188.2

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ ..++.++.+|++ +.++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~-d~~sv~~~~~   85 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP-DAKLSLRALDLS-SLASVAALGE   85 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEEecCC-CHHHHHHHHH
Confidence            45578999999999999999999999999999999999999998888888865433 336788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----  168 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----  168 (280)
                      ++.+.++++|+||||||....  +..+.+.++++..+++|+.+++.+++.++|.|++.  .++||++||..+....    
T Consensus        86 ~~~~~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~  161 (313)
T PRK05854         86 QLRAEGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWD  161 (313)
T ss_pred             HHHHhCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcc
Confidence            999999999999999998632  23356789999999999999999999999999763  5899999998764321    


Q ss_pred             ------CCCCCCCChhhHHHHHHHHHHHHHHh--CCCCeEEEEeecCcccCccccCccc-----hhhhhhhhhcCCCCCC
Q 023555          169 ------QLPGGVAYASSKAGLNAMTKCLSLEL--GVHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRD  235 (280)
Q Consensus       169 ------~~~~~~~Y~~sK~a~~~l~~~la~~~--~~~gi~vn~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~p~~~  235 (280)
                            +++++..|+.||.|+..|++.++.++  ..+||+||+++||+++|++......     ..+...........+.
T Consensus       162 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (313)
T PRK05854        162 DLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGF  241 (313)
T ss_pred             cccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhccc
Confidence                  12456789999999999999999864  4678999999999999998643211     1111111111011111


Q ss_pred             -CCCChHHHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          236 -FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       236 -~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                       +.+++ +.+...++++... ...+|.++.-+|
T Consensus       242 ~~~~~~-~ga~~~l~~a~~~-~~~~g~~~~~~~  272 (313)
T PRK05854        242 LVGTVE-SAILPALYAATSP-DAEGGAFYGPRG  272 (313)
T ss_pred             ccCCHH-HHHHHhhheeeCC-CCCCCcEECCCc
Confidence             23455 6677776766432 223576654443

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=247.59  Aligned_cols=236  Identities=22%  Similarity=0.337  Sum_probs=192.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |+++||||++|||++++++|+++|++|++++|++ +.+++..+.    .  ..++.++.+|++ +.++++++++++.+.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   74 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ----Y--NSNLTFHSLDLQ-DVHELETNFNEILSSI   74 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc----c--CCceEEEEecCC-CHHHHHHHHHHHHHhc
Confidence            6899999999999999999999999999999986 343333221    1  236778899999 6899999999988776


Q ss_pred             CCc----cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           99 GRI----DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        99 g~i----d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      +..    .++|+|+|...+..++.+.+.++|.+.+++|+.+++.++++++|+|++.+..++||++||..+..  +.+++.
T Consensus        75 ~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~  152 (251)
T PRK06924         75 QEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN--PYFGWS  152 (251)
T ss_pred             CcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC--CCCCcH
Confidence            532    28999999865666788899999999999999999999999999998754457999999987765  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCcc---ch--hhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLM---KK--DWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~---~~--~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      .|+++|+|++.|++.++.+++  +.||+|++|.||+++|++.....   ..  ....... ...|.+++.+|+ |+++.+
T Consensus       153 ~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-dva~~~  230 (251)
T PRK06924        153 AYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFI-TLKEEGKLLSPE-YVAKAL  230 (251)
T ss_pred             HHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHH-HHhhcCCcCCHH-HHHHHH
Confidence            999999999999999999985  46899999999999999854311   01  1111122 224677888898 999999


Q ss_pred             HHhhcCCCCcccccEEEeCC
Q 023555          248 RYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdg  267 (280)
                      .+|+++. .+++|+.+.+|+
T Consensus       231 ~~l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        231 RNLLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             HHHHhcc-cCCCCCEeehhh
Confidence            9999874 799999999986

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-34  Score=273.97  Aligned_cols=251  Identities=29%  Similarity=0.386  Sum_probs=214.7

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +...++||++|||||+||||+++++.|+++|++|++++|+.+.++...+++...    .++.++.+|++ +.++++++++
T Consensus       416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~----~~v~~v~~Dvt-d~~~v~~~~~  490 (681)
T PRK08324        416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP----DRALGVACDVT-DEAAVQAAFE  490 (681)
T ss_pred             CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc----CcEEEEEecCC-CHHHHHHHHH
Confidence            344678999999999999999999999999999999999998888777766542    36788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++++.+.|++++.+|+||++||..+..  +.++
T Consensus       491 ~~~~~~g~iDvvI~~AG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~--~~~~  567 (681)
T PRK08324        491 EAALAFGGVDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN--PGPN  567 (681)
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC--CCCC
Confidence            9999999999999999986 446777889999999999999999999999999998755458999999988766  5578


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc--cCccccCcc----------chhhhhhhhhcCCCCCCCCCCh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF--KSEITEGLM----------KKDWLNNVASRTYPLRDFGTTD  240 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v--~t~~~~~~~----------~~~~~~~~~~~~~p~~~~~~~~  240 (280)
                      +..|++||++++.+++.++.+++++||+||.|+||.+  .|++.....          ..+...+......+++++..++
T Consensus       568 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~  647 (681)
T PRK08324        568 FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPE  647 (681)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHH
Confidence            8899999999999999999999999999999999999  787654321          1111122344557888899998


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       |+++++.+++++...+++|+++.+|||....
T Consensus       648 -DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        648 -DVAEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             -HHHHHHHHHhCccccCCcCCEEEECCCchhc
Confidence             9999999999887889999999999997654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=4.7e-34  Score=239.60  Aligned_cols=245  Identities=33%  Similarity=0.574  Sum_probs=208.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||+++||+++++.|+++|++|++++|++++.+....++.+.   +.++.++.+|++ +.+++.++++++.
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   77 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA---GGEARVLVFDVS-DEAAVRALIEAAV   77 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---CCceEEEEccCC-CHHHHHHHHHHHH
Confidence            577899999999999999999999999999999999988877777666542   346888899999 7899999999998


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++||++|... ..+..+.+.+++++.++.|+.+++.+++++.++|.+.+ .+++|++||..+..  +.+++..
T Consensus        78 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~--~~~~~~~  153 (246)
T PRK05653         78 EAFGALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT--GNPGQTN  153 (246)
T ss_pred             HHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc--CCCCCcH
Confidence            88999999999999763 35566788999999999999999999999999997644 57999999987765  5567788


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+.+|++++.+++.+++++.+.|+++++++||.+.+++.....  ....+......|.+++..++ |+++.+.+++++..
T Consensus       154 y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~~~  230 (246)
T PRK05653        154 YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP--EEVKAEILKEIPLGRLGQPE-EVANAVAFLASDAA  230 (246)
T ss_pred             hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh--HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchh
Confidence            9999999999999999999888999999999999998765322  11222222346777788888 99999999999888


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .+++|+++.+|||..+
T Consensus       231 ~~~~g~~~~~~gg~~~  246 (246)
T PRK05653        231 SYITGQVIPVNGGMYM  246 (246)
T ss_pred             cCccCCEEEeCCCeeC
Confidence            8999999999999864

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-34  Score=245.20  Aligned_cols=215  Identities=27%  Similarity=0.340  Sum_probs=186.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||+++++.|+++|++|++++|+++.+++..+++.       ++.++.+|++ +.++++++++++.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~-~~~~~~~~~~~~~   73 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVVGGPLDVT-DPASFAAFLDAVE   73 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-------cceEEEccCC-CHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988877666552       4667899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||||.. ...++.+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+..  +.+++..
T Consensus        74 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  149 (273)
T PRK07825         74 ADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKI--PVPGMAT  149 (273)
T ss_pred             HHcCCCCEEEECCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccC--CCCCCcc
Confidence            9999999999999986 446677889999999999999999999999999998754 68999999998876  6688899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      |++||+++++|+++++.++.+.||++++|+||+++|++......           .+.....+|+ ++|+.+.+++...
T Consensus       150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~-~va~~~~~~l~~~  216 (273)
T PRK07825        150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPE-DVAAAIVGTVAKP  216 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHH-HHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999998653211           1112345677 9999888887654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.4e-34  Score=238.05  Aligned_cols=246  Identities=36%  Similarity=0.585  Sum_probs=205.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..+++|++|||||+++||+++++.|+++|++|+++.|+. +..+...+.+...   ..++.++.+|++ +.+++++++++
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~v~~~~~~   77 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL---GRRAQAVQADVT-DKAALEAAVAA   77 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc---CCceEEEECCcC-CHHHHHHHHHH
Confidence            356789999999999999999999999999987766654 4445555555432   236778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++||++|.. ....+.+.+.+++++.+++|+.+++.+++.+.+++++.+ .+++|++||..+..  +.+++
T Consensus        78 ~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~--~~~~~  153 (249)
T PRK12825         78 AVERFGRIDILVNNAGIF-EDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLP--GWPGR  153 (249)
T ss_pred             HHHHcCCCCEEEECCccC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCC--CCCCc
Confidence            988889999999999975 445566778999999999999999999999999997754 68999999988765  55678


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|+.+|++++.+++.++.++.+.|++++.++||.+.|++............  ....|.+++..++ |+++.+.++++.
T Consensus       154 ~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-dva~~~~~~~~~  230 (249)
T PRK12825        154 SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK--DAETPLGRSGTPE-DIARAVAFLCSD  230 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh--hccCCCCCCcCHH-HHHHHHHHHhCc
Confidence            8999999999999999999998889999999999999998655432222111  1135777888888 999999999988


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      ...+++|+++.++||..+
T Consensus       231 ~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        231 ASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             cccCcCCCEEEeCCCEee
Confidence            888999999999999865

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.7e-34  Score=250.18  Aligned_cols=217  Identities=26%  Similarity=0.372  Sum_probs=173.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ..|++++||||++|||+++|++|+++|++|++++|++++++++.+++.+.++ ..++..+.+|++++   +.+.++++.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~-~~~~~~~~~Dl~~~---~~~~~~~l~~  126 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVVDFSGD---IDEGVKRIKE  126 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC-CcEEEEEEEECCCC---cHHHHHHHHH
Confidence            3589999999999999999999999999999999999999999888876543 23677888999842   2334444444


Q ss_pred             HcC--CccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           97 AFG--RIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        97 ~~g--~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      .++  ++|++|||||+..+. .++.+.+.+++++.+++|+.+++.++++++|.|.+++ .|+||++||..+....+.|..
T Consensus       127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~  205 (320)
T PLN02780        127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLY  205 (320)
T ss_pred             HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccc
Confidence            444  466999999986432 4567889999999999999999999999999998754 789999999887532224678


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ..|++||+|+++|+++++.|++++||+|++|+||+++|++.....          ...+   ..+|+ ++|+.+..-+.
T Consensus       206 ~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~----------~~~~---~~~p~-~~A~~~~~~~~  270 (320)
T PLN02780        206 AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR----------SSFL---VPSSD-GYARAALRWVG  270 (320)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC----------CCCC---CCCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999999865210          0011   23566 88887766664

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=245.96  Aligned_cols=238  Identities=30%  Similarity=0.417  Sum_probs=193.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |.+|++|||||+++||++++++|+++|++|++++|+.+.++...+.+      ..++..+.+|++ +.++++++++.+.+
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~~~~~~   73 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY------GDRLLPLALDVT-DRAAVFAAVETAVE   73 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------cCCeeEEEccCC-CHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999988776655433      125677899999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||||.. ...++.+.+.+++++.+++|+.+++.++++++|.|++.+ .+++|++||..+..  +.++...|
T Consensus        74 ~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~--~~~~~~~Y  149 (275)
T PRK08263         74 HFGRLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGIS--AFPMSGIY  149 (275)
T ss_pred             HcCCCCEEEECCCCc-cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcC--CCCCccHH
Confidence            999999999999986 446677889999999999999999999999999998754 67999999988776  56788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-----h--hhhhhhhhcCCCCCCC-CCChHHHHHHHH
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-----K--DWLNNVASRTYPLRDF-GTTDPALTSLVR  248 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-----~--~~~~~~~~~~~p~~~~-~~~~~~va~~~~  248 (280)
                      +++|++++.+++.++.++++.||+|+.|+||+++|++......     .  ...........+.+++ ..|+ |+++.+.
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-dva~~~~  228 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPE-AAAEALL  228 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHH-HHHHHHH
Confidence            9999999999999999999999999999999999998742110     0  1111112222456667 8888 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCc
Q 023555          249 YLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG  268 (280)
                      ++++..  ...++++...++
T Consensus       229 ~l~~~~--~~~~~~~~~~~~  246 (275)
T PRK08263        229 KLVDAE--NPPLRLFLGSGV  246 (275)
T ss_pred             HHHcCC--CCCeEEEeCchH
Confidence            998754  234555554443

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=2.2e-33  Score=236.15  Aligned_cols=246  Identities=29%  Similarity=0.487  Sum_probs=199.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +.+++|++|||||+++||++++++|+++|++|++++|+ .+..+...+.+++..+  ..+.++.+|++ +.+++++++++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~-~~~~~~~~~~~   78 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRP--GSAAALQADLL-DPDALPELVAA   78 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CceEEEEcCCC-CHHHHHHHHHH
Confidence            34678999999999999999999999999999999986 4445555555543322  24778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||... ..+..+.+.++++..+++|+.+++.+++++.+++.++  .+.+++++|..+..  +.++.
T Consensus        79 ~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~  153 (249)
T PRK09135         79 CVAAFGRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAER--PLKGY  153 (249)
T ss_pred             HHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcC--CCCCc
Confidence            9999999999999999753 3455667889999999999999999999999998764  47888888866554  56778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||++++.+++.++.++.+ +++++++.||++.|++............... ..+..+...++ |+++++.+++.+
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-d~a~~~~~~~~~  230 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILA-RTPLKRIGTPE-DIAEAVRFLLAD  230 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHh-cCCcCCCcCHH-HHHHHHHHHcCc
Confidence            89999999999999999999965 6999999999999998654333322222222 34666777787 999999888864


Q ss_pred             CCCcccccEEEeCCcccCC
Q 023555          254 SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~  272 (280)
                       ..+++|+++.+++|..++
T Consensus       231 -~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        231 -ASFITGQILAVDGGRSLT  248 (249)
T ss_pred             -cccccCcEEEECCCeecc
Confidence             567899999999998654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=6.6e-34  Score=247.55  Aligned_cols=244  Identities=20%  Similarity=0.246  Sum_probs=187.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+|++|||||++|||+++|+.|+++| ++|++++|+.++++++.+++..   ...++.++.+|++ +.++++++++++.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~-~~~~v~~~~~~~~~   77 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM---PKDSYTIMHLDLG-SLDSVRQFVQQFRE   77 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC---CCCeEEEEEcCCC-CHHHHHHHHHHHHH
Confidence            48899999999999999999999999 9999999999888877777642   1235778899999 78999999999988


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEeccccccC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATSR--------  167 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~~~~--------  167 (280)
                      .++++|++|||||+..+..+..+.+.++|++.+++|+.+++.++++++|+|++.+ ..|+||++||..+...        
T Consensus        78 ~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~  157 (314)
T TIGR01289        78 SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPP  157 (314)
T ss_pred             hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCC
Confidence            8899999999999754333334678899999999999999999999999998643 2479999999876321        


Q ss_pred             -----------------------CCCCCCCCChhhHHHHHHHHHHHHHHhC-CCCeEEEEeecCcc-cCccccCccch-h
Q 023555          168 -----------------------GQLPGGVAYASSKAGLNAMTKCLSLELG-VHKIRVNSICPGLF-KSEITEGLMKK-D  221 (280)
Q Consensus       168 -----------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~gi~vn~v~pG~v-~t~~~~~~~~~-~  221 (280)
                                             .++.++..|++||+|+..+++.+++++. ++||+|++|+||.| +|++.+..... .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~  237 (314)
T TIGR01289       158 KANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFR  237 (314)
T ss_pred             cccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHH
Confidence                                   0112456799999999999999999985 46999999999999 69987543211 1


Q ss_pred             hhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          222 WLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       222 ~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      ++.....+ ...+.+.+|+ +.+..+.+++.+.....+|.++.-++
T Consensus       238 ~~~~~~~~-~~~~~~~~~~-~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       238 TLFPPFQK-YITKGYVSEE-EAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHHH-HHhccccchh-hhhhhhHHhhcCcccCCCceeeecCC
Confidence            11111111 1223355677 88887778776544445787665433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-35  Score=245.39  Aligned_cols=240  Identities=23%  Similarity=0.251  Sum_probs=189.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+ ..+...+++...   +.++.++.+|++ +.+++++++++
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~~   77 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA---GGRASAVGADLT-DEESVAALMDT   77 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHHHH
Confidence            3578999999999999999999999999999999999753 455555556442   235778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC---CCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR---GQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~---~~~  170 (280)
                      +.+.++.+|++|||||.... .   ..   ++...+++|+.+++.+++++.|+|.+   .+++|++||..+...   ...
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~-~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~  147 (248)
T PRK07806         78 AREEFGGLDALVLNASGGME-S---GM---DEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTM  147 (248)
T ss_pred             HHHhCCCCcEEEECCCCCCC-C---CC---CcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCC
Confidence            99999999999999986421 1   11   24567899999999999999999853   479999999654311   123


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +.+..|++||++++.+++.++.+++++||+||+|.||.+.|++..................|++++..|+ |+++.+.++
T Consensus       148 ~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l  226 (248)
T PRK07806        148 PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVS-EFAAEVARA  226 (248)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHH-HHHHHHHHH
Confidence            4567899999999999999999999999999999999999886543211100001112236788999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++  ..+++|+++.++||.+.
T Consensus       227 ~~--~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        227 VT--APVPSGHIEYVGGADYF  245 (248)
T ss_pred             hh--ccccCccEEEecCccce
Confidence            97  45889999999999765

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.1e-36  Score=227.72  Aligned_cols=243  Identities=27%  Similarity=0.447  Sum_probs=209.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +.+|-+.|||||.+|+|++.|.+|+++|+.|++.+-..++.++..+++.      .++.+...|++ ++++++..+..++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg------~~~vf~padvt-sekdv~aala~ak   78 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG------GKVVFTPADVT-SEKDVRAALAKAK   78 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC------CceEEeccccC-cHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999888888888873      48999999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEeccccc
Q 023555           96 EAFGRIDALVNNAGVSGAV-----KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIAAT  165 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~vv~vsS~~~~  165 (280)
                      .+||++|.+|||||+.-..     ..-...+.|+|++.+++|+.|+|++++.....|.+.     ++.|.||+..|+.++
T Consensus        79 ~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf  158 (260)
T KOG1199|consen   79 AKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF  158 (260)
T ss_pred             hhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee
Confidence            9999999999999974221     233467899999999999999999999999888653     235799999999998


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPALT  244 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~va  244 (280)
                      .  +..++.+|++||.++.+|+.-+|++++..|||++.|.||.++||+...++.+  ...++...+|. .|++.|. |-+
T Consensus       159 d--gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek--v~~fla~~ipfpsrlg~p~-eya  233 (260)
T KOG1199|consen  159 D--GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK--VKSFLAQLIPFPSRLGHPH-EYA  233 (260)
T ss_pred             c--CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH--HHHHHHHhCCCchhcCChH-HHH
Confidence            7  6789999999999999999999999999999999999999999998766432  33445555564 5788888 888


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .++..+.  +..++||++|.+||-..++
T Consensus       234 hlvqaii--enp~lngevir~dgalrm~  259 (260)
T KOG1199|consen  234 HLVQAII--ENPYLNGEVIRFDGALRMP  259 (260)
T ss_pred             HHHHHHH--hCcccCCeEEEecceecCC
Confidence            8888887  5669999999999987654

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=237.18  Aligned_cols=227  Identities=32%  Similarity=0.443  Sum_probs=191.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|+++||||+++||++++++|+++|++|++++|++++.+.+.+++.+.   ..++.++.+|++ +.+++.++++.+.+.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~~   80 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST---GVKAAAYSIDLS-NPEAIAPGIAELLEQ   80 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC---CCcEEEEEccCC-CHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998887777777543   236788999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      ++++|++|||+|... ..+..+.+.+++++.+++|+.+++.++++++++|.+++ .+++|++||..+..  +.+++..|+
T Consensus        81 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~  156 (241)
T PRK07454         81 FGCPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARN--AFPQWGAYC  156 (241)
T ss_pred             cCCCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCc--CCCCccHHH
Confidence            999999999999763 34566788999999999999999999999999998754 68999999988765  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      ++|++++.++++++.+++++||++++|.||+++|++.......        ......+..+|+ ++|+.+.+|++.....
T Consensus       157 ~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~--------~~~~~~~~~~~~-~va~~~~~l~~~~~~~  227 (241)
T PRK07454        157 VSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ--------ADFDRSAMLSPE-QVAQTILHLAQLPPSA  227 (241)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--------cccccccCCCHH-HHHHHHHHHHcCCccc
Confidence            9999999999999999999999999999999999985421100        001123445666 9999999999977665


Q ss_pred             cccc
Q 023555          258 VSGN  261 (280)
Q Consensus       258 i~G~  261 (280)
                      +.++
T Consensus       228 ~~~~  231 (241)
T PRK07454        228 VIED  231 (241)
T ss_pred             eeee
Confidence            5554

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=243.19  Aligned_cols=223  Identities=25%  Similarity=0.298  Sum_probs=183.6

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++...+++|+++||||++|||+++|+.|+++|++|++++|+.+.++++.+++.+.   +.++.++.+|++ +.++++++
T Consensus        32 ~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~---~~~~~~~~~Dl~-d~~~v~~~  107 (293)
T PRK05866         32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA---GGDAMAVPCDLS-DLDAVDAL  107 (293)
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHH
Confidence            34556889999999999999999999999999999999999998888887777543   235778899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++.+.+.++++|++|||||.... .++.+.  +.++++..+++|+.+++.++++++|+|++.+ .|+||++||..+.. .
T Consensus       108 ~~~~~~~~g~id~li~~AG~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-~  184 (293)
T PRK05866        108 VADVEKRIGGVDILINNAGRSIR-RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLS-E  184 (293)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC-C
Confidence            99999999999999999998633 333332  4688999999999999999999999998754 68999999976542 1


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      ..++...|++||+|+++|+++++.|++++||+|++|+||+++|++.......          ... ...+|+ ++|+.+.
T Consensus       185 ~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~----------~~~-~~~~pe-~vA~~~~  252 (293)
T PRK05866        185 ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY----------DGL-PALTAD-EAAEWMV  252 (293)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc----------cCC-CCCCHH-HHHHHHH
Confidence            3467789999999999999999999999999999999999999987532110          011 134676 8888777


Q ss_pred             Hhhc
Q 023555          249 YLVH  252 (280)
Q Consensus       249 ~l~s  252 (280)
                      ..+.
T Consensus       253 ~~~~  256 (293)
T PRK05866        253 TAAR  256 (293)
T ss_pred             HHHh
Confidence            7665

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=4e-34  Score=238.99  Aligned_cols=223  Identities=21%  Similarity=0.266  Sum_probs=180.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++++||||++|||++++++|+++|  ..|++.+|+....      .     ...++.++++|++ +.++++++    .+.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~-----~~~~~~~~~~Dls-~~~~~~~~----~~~   64 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F-----QHDNVQWHALDVT-DEAEIKQL----SEQ   64 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c-----ccCceEEEEecCC-CHHHHHHH----HHh
Confidence            479999999999999999999985  5666667754321      1     1236778899999 66666664    455


Q ss_pred             cCCccEEEECCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc-CCCCC
Q 023555           98 FGRIDALVNNAGVSGA-----VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS-RGQLP  171 (280)
Q Consensus        98 ~g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~-~~~~~  171 (280)
                      ++++|++|||+|....     ..++.+.+.+.|++.+++|+.+++.+++.++|.|++.+ .++++++||..+.. ..+.+
T Consensus        65 ~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~  143 (235)
T PRK09009         65 FTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLG  143 (235)
T ss_pred             cCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCC
Confidence            7899999999998642     23466788899999999999999999999999997643 57999999865422 11345


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCC--CCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGV--HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~--~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ++..|+++|++++.|+++++.|+.+  ++|+||+|+||+++|++.....          ...|.++..+|+ |+++.+.+
T Consensus       144 ~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~-~~a~~~~~  212 (235)
T PRK09009        144 GWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ----------QNVPKGKLFTPE-YVAQCLLG  212 (235)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh----------hccccCCCCCHH-HHHHHHHH
Confidence            6789999999999999999999986  6999999999999999865321          124667777888 99999999


Q ss_pred             hhcCCCCcccccEEEeCCccc
Q 023555          250 LVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ++++..++++|+.+.+|||+.
T Consensus       213 l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        213 IIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHcCChhhCCcEEeeCCcCC
Confidence            999998999999999999986

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.1e-34  Score=267.18  Aligned_cols=233  Identities=28%  Similarity=0.386  Sum_probs=195.1

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ....++++++|||||++|||++++++|+++|++|++++|+.++++++.+++....   .++.++.+|++ +.++++++++
T Consensus       309 ~~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~-~~~~~~~~~~  384 (582)
T PRK05855        309 PRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG---AVAHAYRVDVS-DADAMEAFAE  384 (582)
T ss_pred             ccccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCC-CHHHHHHHHH
Confidence            3446789999999999999999999999999999999999988888888775532   36788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|++|||||.. ..+++.+.+.+++++++++|+.|++.++++++|.|.+++.+|+||++||..+..  +.++
T Consensus       385 ~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~  461 (582)
T PRK05855        385 WVRAEHGVPDIVVNNAGIG-MAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA--PSRS  461 (582)
T ss_pred             HHHHhcCCCcEEEECCccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--CCCC
Confidence            9999999999999999986 445677889999999999999999999999999998865568999999998876  6678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-------hhhhhhhcCCCCCCCCCChHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-------WLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      ...|++||+|+++|+++++.|++++||+|++|+||+++|++........       ........ .+..+..+|+ ++|+
T Consensus       462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~-~va~  539 (582)
T PRK05855        462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADK-LYQRRGYGPE-KVAK  539 (582)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhh-hccccCCCHH-HHHH
Confidence            8999999999999999999999999999999999999999876432100       00011111 2233445677 9999


Q ss_pred             HHHHhhcCC
Q 023555          246 LVRYLVHDS  254 (280)
Q Consensus       246 ~~~~l~s~~  254 (280)
                      .+.+.++..
T Consensus       540 ~~~~~~~~~  548 (582)
T PRK05855        540 AIVDAVKRN  548 (582)
T ss_pred             HHHHHHHcC
Confidence            999988643

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-34  Score=237.44  Aligned_cols=227  Identities=25%  Similarity=0.418  Sum_probs=186.1

Q ss_pred             EEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 023555           23 MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRID  102 (280)
Q Consensus        23 lItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  102 (280)
                      |||||++|||++++++|+++|++|++++|+.++++...+++.+    +.++.++.+|++ +.+++++++++    .+++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~-~~~~~~~~~~~----~~~id   71 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG----GAPVRTAALDIT-DEAAVDAFFAE----AGPFD   71 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCceEEEEccCC-CHHHHHHHHHh----cCCCC
Confidence            6999999999999999999999999999998877776666642    236778899999 67888777765    47899


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhHHH
Q 023555          103 ALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAG  182 (280)
Q Consensus       103 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a  182 (280)
                      ++|||+|... ..++.+.+.+++++.+++|+.+++.+++  .+.+.   +.|+||++||..+..  +.++...|+++|++
T Consensus        72 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~---~~g~iv~~ss~~~~~--~~~~~~~Y~~sK~a  143 (230)
T PRK07041         72 HVVITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA---PGGSLTFVSGFAAVR--PSASGVLQGAINAA  143 (230)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc---CCeEEEEECchhhcC--CCCcchHHHHHHHH
Confidence            9999999863 3566778999999999999999999999  44553   268999999988876  56778899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch--hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccc
Q 023555          183 LNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK--DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSG  260 (280)
Q Consensus       183 ~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G  260 (280)
                      +++|+++++.|+..  |+||+++||+++|++.......  ...........|++++..|+ |+++++.||+++  .+++|
T Consensus       144 ~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~--~~~~G  218 (230)
T PRK07041        144 LEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPE-DVANAILFLAAN--GFTTG  218 (230)
T ss_pred             HHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhcC--CCcCC
Confidence            99999999999975  9999999999999986532211  11112223346888888898 999999999974  58999


Q ss_pred             cEEEeCCcccC
Q 023555          261 NIFIVDSGATL  271 (280)
Q Consensus       261 ~~i~vdgG~~~  271 (280)
                      +++.+|||+.+
T Consensus       219 ~~~~v~gg~~~  229 (230)
T PRK07041        219 STVLVDGGHAI  229 (230)
T ss_pred             cEEEeCCCeec
Confidence            99999999875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.8e-33  Score=236.99  Aligned_cols=231  Identities=27%  Similarity=0.393  Sum_probs=188.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++++||||++|||+++++.|+++|++|++++|++++++.+.+.+.      .++.++.+|++ +.++++++++++.+.++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~-~~~~i~~~~~~~~~~~~   73 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVR-NRAAIEEMLASLPAEWR   73 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEEecCC-CHHHHHHHHHHHHHHcC
Confidence            479999999999999999999999999999999887766655431      25778899999 78999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++|||+|......++.+.+.+++++++++|+.+++.++++++|+|.+.+ .+++|++||..+..  +.++...|+++
T Consensus        74 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~~s  150 (248)
T PRK10538         74 NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW--PYAGGNVYGAT  150 (248)
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC--CCCCCchhHHH
Confidence            9999999999753334666789999999999999999999999999998644 68999999987765  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-c-c-hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-M-K-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~-~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      |++++.|++.++.++.++||++|+|.||++.|++.... . . .......    .......+|+ |+|+.+.||++....
T Consensus       151 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-dvA~~~~~l~~~~~~  225 (248)
T PRK10538        151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT----YQNTVALTPE-DVSEAVWWVATLPAH  225 (248)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh----ccccCCCCHH-HHHHHHHHHhcCCCc
Confidence            99999999999999999999999999999985443221 1 1 1111111    1112235777 999999999997777


Q ss_pred             cccccEEEe
Q 023555          257 YVSGNIFIV  265 (280)
Q Consensus       257 ~i~G~~i~v  265 (280)
                      +.+|+...+
T Consensus       226 ~~~~~~~~~  234 (248)
T PRK10538        226 VNINTLEMM  234 (248)
T ss_pred             ccchhhccc
Confidence            777776554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=4.1e-33  Score=235.41  Aligned_cols=244  Identities=29%  Similarity=0.453  Sum_probs=203.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||+++||+++++.|+++|++|++++|+.+..+.+.+++...   +.++.++.+|++ +.++++++++++.+.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   76 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA---GGSVIYLVADVT-KEDEIADMIAAAAAEF   76 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCC-CHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999999988887777766542   236888999999 7899999999999989


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++||++|... ..+..+.+.++++++++.|+.+++.+++++++.|++.+ .+++|++||..+..  +.+.+..|+.
T Consensus        77 ~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~--~~~~~~~y~~  152 (255)
T TIGR01963        77 GGLDILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLV--ASPFKSAYVA  152 (255)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcC--CCCCCchhHH
Confidence            99999999999763 34555778899999999999999999999999997644 67999999987665  5678889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch----------hhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK----------DWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~----------~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +|++++.+++.++.++.+.+|+++.++||.+.|++.......          ...........+.+++..++ |+++.+.
T Consensus       153 sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~  231 (255)
T TIGR01963       153 AKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVD-EVAETAL  231 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHH-HHHHHHH
Confidence            999999999999999988899999999999999874322110          11111122223556678888 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++++....++|+++.+|||++.
T Consensus       232 ~~~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       232 FLASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             HHcCccccCccceEEEEcCcccc
Confidence            99987667889999999999875

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=3.3e-33  Score=235.66  Aligned_cols=241  Identities=41%  Similarity=0.669  Sum_probs=196.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH--HHHHHHHHHhhcCCC-cceEEEEeccCCC-HHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKQSGSS-VRAMAVELDVSAN-GAAIENSV   91 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~~~~   91 (280)
                      .+++|+++||||++|||+++|+.|+++|++|+++.++.+.  .+...+... .  .. ....+..+|++ + .++++.++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~Dvs-~~~~~v~~~~   77 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E--AGGGRAAAVAADVS-DDEESVEALV   77 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h--cCCCcEEEEEecCC-CCHHHHHHHH
Confidence            5789999999999999999999999999998888887654  344444333 1  11 36778889999 6 89999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +.+.+.+|++|++|||||......++.+.+.++|++.+++|+.+++.+++.+.|.+.+   . +||++||..+. ..  +
T Consensus        78 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~~--~  150 (251)
T COG1028          78 AAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-GG--P  150 (251)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-CC--C
Confidence            9999999999999999998632247788899999999999999999999988888873   2 99999998875 32  3


Q ss_pred             C-CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhh--hhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          172 G-GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDW--LNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       172 ~-~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      + +..|++||+|+.+|++.++.++.++||+||+|+||+++|++.........  ....... .|..++..|. +++..+.
T Consensus       151 ~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~  228 (251)
T COG1028         151 PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAAR-IPLGRLGTPE-EVAAAVA  228 (251)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhc-CCCCCCcCHH-HHHHHHH
Confidence            4 58999999999999999999999999999999999999998765432210  1111111 1666788888 8999888


Q ss_pred             HhhcCC-CCcccccEEEeCCcc
Q 023555          249 YLVHDS-SEYVSGNIFIVDSGA  269 (280)
Q Consensus       249 ~l~s~~-~~~i~G~~i~vdgG~  269 (280)
                      |+.+.. ..+++|+.+.+|||+
T Consensus       229 ~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         229 FLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHcCcchhccccCCEEEeCCCC
Confidence            888764 779999999999986

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=240.85  Aligned_cols=226  Identities=27%  Similarity=0.356  Sum_probs=185.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +.+|++|||||+||||++++++|+++|++|++++|+.++++.+.+..      ..++..+.+|++ +.+++.++++.+.+
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~------~~~~~~~~~D~~-d~~~~~~~~~~~~~   74 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH------PDRALARLLDVT-DFDAIDAVVADAEA   74 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc------CCCeeEEEccCC-CHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999987766544321      225778899999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||||.. ...+..+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..  +.+++..|
T Consensus        75 ~~~~~d~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~--~~~~~~~Y  150 (277)
T PRK06180         75 TFGPIDVLVNNAGYG-HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLI--TMPGIGYY  150 (277)
T ss_pred             HhCCCCEEEECCCcc-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccC--CCCCcchh
Confidence            999999999999985 445677889999999999999999999999999998754 68999999988876  56788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------hhh---hhhh--hhcCCCCCCCCCChHHHHH
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------KDW---LNNV--ASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------~~~---~~~~--~~~~~p~~~~~~~~~~va~  245 (280)
                      +++|++++.++++++.++++.|+++++|+||.+.|++......      .++   ....  .....+..++..|+ ++++
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~  229 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPA-KAAQ  229 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHH-HHHH
Confidence            9999999999999999999999999999999999987432110      110   0000  11123455677888 9999


Q ss_pred             HHHHhhcCC
Q 023555          246 LVRYLVHDS  254 (280)
Q Consensus       246 ~~~~l~s~~  254 (280)
                      .+.+++...
T Consensus       230 ~~~~~l~~~  238 (277)
T PRK06180        230 AILAAVESD  238 (277)
T ss_pred             HHHHHHcCC
Confidence            999988654

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-34  Score=245.93  Aligned_cols=249  Identities=24%  Similarity=0.291  Sum_probs=190.4

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +.++++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+..+ ..++.++.+|++ +.+++++++++
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~-d~~~v~~~~~~   88 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-GADVTLQELDLT-SLASVRAAADA   88 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEECCCC-CHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888777777754322 236778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----  168 (280)
                      +.+.++++|++|||||...+   ....+.++++..+++|+.+++.+++.++|.|++.+ .++||++||..+....     
T Consensus        89 ~~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~  164 (306)
T PRK06197         89 LRAAYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFD  164 (306)
T ss_pred             HHhhCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCcc
Confidence            99999999999999997532   23466788999999999999999999999998754 6899999997643211     


Q ss_pred             ------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEe--ecCcccCccccCccchhhhhhhhhcCCCCCCCCCCh
Q 023555          169 ------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSI--CPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTD  240 (280)
Q Consensus       169 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (280)
                            +.++...|++||++++.|++.++.+++++|++++++  +||+++|++.+.....  .........|.  +..+.
T Consensus       165 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~~~~--~~~~~  240 (306)
T PRK06197        165 DLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVLAPL--LAQSP  240 (306)
T ss_pred             ccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHHHhh--hcCCH
Confidence                  123456899999999999999999998888777655  6999999997654321  11111111121  23344


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ++-+...++++ ......+|..+..||+....+
T Consensus       241 ~~g~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~  272 (306)
T PRK06197        241 EMGALPTLRAA-TDPAVRGGQYYGPDGFGEQRG  272 (306)
T ss_pred             HHHHHHHHHHh-cCCCcCCCeEEccCcccccCC
Confidence            24444444444 455667899888887765443

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=236.84  Aligned_cols=215  Identities=27%  Similarity=0.386  Sum_probs=179.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||++|||+++++.|+++|++|++++|+.+.++++.+++...   . ++.++.+|++ +.++++++++++.+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~-~~~~~~~Dl~-~~~~i~~~~~~~~~~~   76 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA---A-RVSVYAADVR-DADALAAAAADFIAAH   76 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC---C-eeEEEEcCCC-CHHHHHHHHHHHHHhC
Confidence            479999999999999999999999999999999988887766655321   2 6888999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||+|.........+.+.+++++.+++|+.+++.++++++|.|++.+ .++||++||..+..  +.++...|++
T Consensus        77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~a  153 (257)
T PRK07024         77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVR--GLPGAGAYSA  153 (257)
T ss_pred             CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcC--CCCCCcchHH
Confidence            99999999999763322233378899999999999999999999999997754 68999999988876  5678889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      ||++++.|+++++.|+.++||+|++|+||+++|++.....            .+.....+|+ +++..+...+...
T Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~-~~a~~~~~~l~~~  216 (257)
T PRK07024        154 SKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDAD-RFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHH-HHHHHHHHHHhCC
Confidence            9999999999999999999999999999999998754211            1111224566 8888887777643

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=6.7e-34  Score=221.55  Aligned_cols=187  Identities=19%  Similarity=0.278  Sum_probs=168.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +.+.|.++|||||++|||+++|++|.+.|-.|++++|+++.++++.++..       ......||+. |.++.+++++.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-------~~~t~v~Dv~-d~~~~~~lvewL   72 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-------EIHTEVCDVA-DRDSRRELVEWL   72 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-------chheeeeccc-chhhHHHHHHHH
Confidence            36889999999999999999999999999999999999999999887653       4667889998 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      ++.+..++++|||||+....... .+...++.++.+++|+.+++.+++.++|++.++. .+.||+|||..++.  |....
T Consensus        73 kk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafv--Pm~~~  149 (245)
T COG3967          73 KKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFV--PMAST  149 (245)
T ss_pred             HhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccC--ccccc
Confidence            99999999999999987443222 3456778889999999999999999999998754 79999999998887  77788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE  212 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~  212 (280)
                      +.|+++|+|+++++.+|..+++..+|.|.-+.|..|+|+
T Consensus       150 PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999999999998999999999999996

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=238.52  Aligned_cols=225  Identities=25%  Similarity=0.359  Sum_probs=186.6

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...   +.++.++.+|++ +.++++++++++.+.++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA---GGDGFYQRCDVR-DYSQLTALAQACEEKWG   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCC-CHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999998888888777653   236778899999 78999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++|||+|.. ....+.+.+.+++++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..  +.++...|+++
T Consensus        77 ~id~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~--~~~~~~~Y~~s  152 (270)
T PRK05650         77 GIDVIVNNAGVA-SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLM--QGPAMSSYNVA  152 (270)
T ss_pred             CCCEEEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcC--CCCCchHHHHH
Confidence            999999999986 345677889999999999999999999999999997754 68999999988876  66788999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      |+++++++++++.++.++||++++|+||+++|++....... +........ .......+|+ ++|+.+...+...
T Consensus       153 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~vA~~i~~~l~~~  226 (270)
T PRK05650        153 KAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK-LLEKSPITAA-DIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH-HhhcCCCCHH-HHHHHHHHHHhCC
Confidence            99999999999999999999999999999999987654221 111111111 1112235676 9998888777643

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=239.99  Aligned_cols=185  Identities=26%  Similarity=0.362  Sum_probs=163.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .+|+++||||++|||+++++.|+++|++|++++|+.+.++++.+    .     .+.++.+|++ +.++++++++.+.+.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~-----~~~~~~~Dl~-d~~~~~~~~~~~~~~   72 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E-----GLEAFQLDYA-EPESIAALVAQVLEL   72 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C-----CceEEEccCC-CHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999877665432    1     3567899999 789999999998776


Q ss_pred             c-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           98 F-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        98 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      + +++|++|||||.. ..+++.+.+.++++..+++|+.|++.+++.++|.|.+.+ .|+||++||..+..  +.++...|
T Consensus        73 ~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  148 (277)
T PRK05993         73 SGGRLDALFNNGAYG-QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLV--PMKYRGAY  148 (277)
T ss_pred             cCCCccEEEECCCcC-CCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcC--CCCccchH
Confidence            5 6899999999985 345677889999999999999999999999999998754 68999999988876  66788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      ++||++++.|+++++.|++++||+|++|+||+++|++...
T Consensus       149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            9999999999999999999999999999999999998653

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=8.3e-33  Score=237.83  Aligned_cols=195  Identities=27%  Similarity=0.390  Sum_probs=172.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...   +.++.++.+|++ +.++++++++.+
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-d~~~~~~~~~~~   77 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ---GAEVLGVRTDVS-DAAQVEALADAA   77 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988888777776542   346788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-----CeEEEEeccccccCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQE-----GSVINISSIAATSRGQ  169 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----g~vv~vsS~~~~~~~~  169 (280)
                      .+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+....     |++|++||..+..  +
T Consensus        78 ~~~~g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~  154 (287)
T PRK06194         78 LERFGAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL--A  154 (287)
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--C
Confidence            999999999999999863 3566778999999999999999999999999999876532     7999999988876  5


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCC--CCeEEEEeecCcccCccccC
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGV--HKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~--~gi~vn~v~pG~v~t~~~~~  216 (280)
                      .++...|+++|++++.|+++++.++..  .+|+++++.||++.|++...
T Consensus       155 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        155 PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence            578889999999999999999999874  57999999999999998654

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=236.20  Aligned_cols=245  Identities=30%  Similarity=0.425  Sum_probs=196.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|++|||||+|+||+++++.|+++|++|++++|+.+..+...+++.... ...++.++.+|++ +.+++++ ++++.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~-d~~~~~~-~~~~~~   77 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN-LQQNIKVQQLDVT-DQNSIHN-FQLVLK   77 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCceeEEecCCC-CHHHHHH-HHHHHH
Confidence            468999999999999999999999999999999999888877766654322 2246888899999 7899999 999989


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||+|... .....+.+.+++++.+++|+.+++.++++++|.|++.+ .+++|++||..+..  +.+++..|
T Consensus        78 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~--~~~~~~~Y  153 (280)
T PRK06914         78 EIGRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRV--GFPGLSPY  153 (280)
T ss_pred             hcCCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccC--CCCCCchh
Confidence            9999999999999763 35566788999999999999999999999999997654 68999999987765  55788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------------hhhhhhhhhc-CCCCCCCCCChHHH
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------------KDWLNNVASR-TYPLRDFGTTDPAL  243 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------------~~~~~~~~~~-~~p~~~~~~~~~~v  243 (280)
                      +++|++++.|+++++.++.++||++++++||.++|++......            .......... ..+.+++..|+ |+
T Consensus       154 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dv  232 (280)
T PRK06914        154 VSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPI-DV  232 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHH-HH
Confidence            9999999999999999999999999999999999997542110            0111111110 13456778888 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++++.++++.....   ..+.++.|..+.
T Consensus       233 a~~~~~~~~~~~~~---~~~~~~~~~~~~  258 (280)
T PRK06914        233 ANLIVEIAESKRPK---LRYPIGKGVKLM  258 (280)
T ss_pred             HHHHHHHHcCCCCC---cccccCCchHHH
Confidence            99999999755332   457776665543

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=231.13  Aligned_cols=230  Identities=28%  Similarity=0.382  Sum_probs=188.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+..|+++||||+++||+++++.|+++|++|++++|+.+.+++..+++...   +.++.++.+|++ +.++++++++++.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~   82 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD---GGEAVAFPLDVT-DPDSVKSFVAQAE   82 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECCCC-CHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999988777766666542   236778899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|++|||||... .....+.+.+++++.+++|+.+++.+++++++.|.+++ .++||++||..+..  +.+....
T Consensus        83 ~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  158 (274)
T PRK07775         83 EALGEIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALR--QRPHMGA  158 (274)
T ss_pred             HhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcC--CCCCcch
Confidence            88999999999999763 34566778899999999999999999999999997654 68999999987765  5567788


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---hhhhhhhh-cCCCCCCCCCChHHHHHHHHHhh
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNVAS-RTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---~~~~~~~~-~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      |+++|++++.+++.++.++.+.||++++|+||+++|++.......   ........ ...+.+++..++ |+++++.+++
T Consensus       159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~a~~~~~  237 (274)
T PRK07775        159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRAS-DLARAITFVA  237 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHH-HHHHHHHHHh
Confidence            999999999999999999998999999999999999875432221   11111111 112345678888 9999999998


Q ss_pred             cCC
Q 023555          252 HDS  254 (280)
Q Consensus       252 s~~  254 (280)
                      +..
T Consensus       238 ~~~  240 (274)
T PRK07775        238 ETP  240 (274)
T ss_pred             cCC
Confidence            743

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2.5e-32  Score=238.67  Aligned_cols=244  Identities=19%  Similarity=0.209  Sum_probs=184.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++...   ..++.++.+|++ +.++++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~v~~~~~~~   77 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP---PDSYTIIHIDLG-DLDSVRRFVDDF   77 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc---CCceEEEEecCC-CHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877776421   236778899999 789999999998


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEeccccccC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINISSIAATSR------  167 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vsS~~~~~~------  167 (280)
                      .+.++++|+||||||+........+.+.++++..+++|+.+++.++++++|.|++.+. .++||++||......      
T Consensus        78 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~  157 (322)
T PRK07453         78 RALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKI  157 (322)
T ss_pred             HHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCcc
Confidence            8887899999999997643233346688999999999999999999999999987543 369999999654210      


Q ss_pred             ---------------------------CCCCCCCCChhhHHHHHHHHHHHHHHhC-CCCeEEEEeecCcc-cCccccCcc
Q 023555          168 ---------------------------GQLPGGVAYASSKAGLNAMTKCLSLELG-VHKIRVNSICPGLF-KSEITEGLM  218 (280)
Q Consensus       168 ---------------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~gi~vn~v~pG~v-~t~~~~~~~  218 (280)
                                                 .++.+...|+.||.+...+++.+++++. .+||+|++|+||.| .|++.+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~  237 (322)
T PRK07453        158 PIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTP  237 (322)
T ss_pred             CCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCC
Confidence                                       0112346899999999999999999995 46999999999999 588765432


Q ss_pred             ch-hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEE
Q 023555          219 KK-DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFI  264 (280)
Q Consensus       219 ~~-~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~  264 (280)
                      .. ..+...... .......+++ +.++.+.+++.+.....+|.++.
T Consensus       238 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        238 PLFQKLFPWFQK-NITGGYVSQE-LAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHHH-HHhhceecHH-HHhhHHHHhhcCcccCCCCceee
Confidence            11 011111111 1112234555 56666667765544456887775

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=5.2e-32  Score=226.42  Aligned_cols=238  Identities=34%  Similarity=0.578  Sum_probs=198.4

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +||||++++||+++++.|+++|++|++++|+. +..+...+.+.+.   +.++..+.+|++ +.++++++++++.+.+++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY---GVKALGVVCDVS-DREDVKAVVEEIEEELGP   76 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEecCC-CHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999998875 4455555555432   235778999999 789999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|++||++|... .....+.+.+++++.+++|+.+++.+++.+.+.+.+.+ .+++|++||..+..  +.+++..|+++|
T Consensus        77 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~--g~~~~~~y~~~k  152 (239)
T TIGR01830        77 IDILVNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLM--GNAGQANYAASK  152 (239)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccC--CCCCCchhHHHH
Confidence            999999999853 34556778899999999999999999999999997644 67999999987765  557888999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccc
Q 023555          181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSG  260 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G  260 (280)
                      ++++.+++.++.++...|++++.++||++.|++..... ......+ ....|..++..++ |+++.+.+++++...+++|
T Consensus       153 ~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~g  229 (239)
T TIGR01830       153 AGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS-EKVKKKI-LSQIPLGRFGTPE-EVANAVAFLASDEASYITG  229 (239)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC-hHHHHHH-HhcCCcCCCcCHH-HHHHHHHHHhCcccCCcCC
Confidence            99999999999999989999999999999998765432 2222222 2336777888888 9999999999887789999


Q ss_pred             cEEEeCCccc
Q 023555          261 NIFIVDSGAT  270 (280)
Q Consensus       261 ~~i~vdgG~~  270 (280)
                      +++.+|+|+.
T Consensus       230 ~~~~~~~g~~  239 (239)
T TIGR01830       230 QVIHVDGGMY  239 (239)
T ss_pred             CEEEeCCCcC
Confidence            9999999973

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5e-32  Score=226.64  Aligned_cols=236  Identities=24%  Similarity=0.361  Sum_probs=193.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++||||+++||.++++.|+++|++|++++|++++++.+.+++.+.    .++.++.+|++ +.++++++++++.
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~-~~~~~~~~~~~~~   76 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY----GNIHYVVGDVS-STESARNVIEKAA   76 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEECCCC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988877765655431    25778899999 7899999999998


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      ..++++|.+|+++|.... .+.  .+.++++.++++|+.+++.+++.++|.|.+   .+++|++||..+.. .+.+.+..
T Consensus        77 ~~~~~id~ii~~ag~~~~-~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~-~~~~~~~~  149 (238)
T PRK05786         77 KVLNAIDGLVVTVGGYVE-DTV--EEFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIY-KASPDQLS  149 (238)
T ss_pred             HHhCCCCEEEEcCCCcCC-Cch--HHHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcc-cCCCCchH
Confidence            888999999999986532 222  234889999999999999999999999864   47999999976532 13466778


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCC-CCCCChHHHHHHHHHhhcCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR-DFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~va~~~~~l~s~~  254 (280)
                      |+++|++++.+++.++.++..+||++++|+||++.|++...   ..+ .. .   .+.+ +..+++ ++++.+.+++++.
T Consensus       150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~---~~~-~~-~---~~~~~~~~~~~-~va~~~~~~~~~~  220 (238)
T PRK05786        150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE---RNW-KK-L---RKLGDDMAPPE-DFAKVIIWLLTDE  220 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch---hhh-hh-h---ccccCCCCCHH-HHHHHHHHHhccc
Confidence            99999999999999999999999999999999999986421   111 11 1   1222 345566 9999999999988


Q ss_pred             CCcccccEEEeCCcccCC
Q 023555          255 SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~  272 (280)
                      ..+++|+.+.+|||.++.
T Consensus       221 ~~~~~g~~~~~~~~~~~~  238 (238)
T PRK05786        221 ADWVDGVVIPVDGGARLK  238 (238)
T ss_pred             ccCccCCEEEECCccccC
Confidence            889999999999999874

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=231.06  Aligned_cols=222  Identities=25%  Similarity=0.365  Sum_probs=186.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|+++||||++|||+++++.|+++|++|++++|+++.+++..+++ +.   ..++.++.+|++ +.++++++++.+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~---~~~~~~~~~D~~-d~~~~~~~~~~~   75 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY---PGRHRWVVADLT-SEAGREAVLARA   75 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc---CCceEEEEccCC-CHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988888777666 21   236788999999 789999999988


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+ ++++|++|||||.. ...++.+.+.+++++.+++|+.+++.+++.++++|.+++ .+++|++||..+..  +.++..
T Consensus        76 ~~-~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~  150 (263)
T PRK09072         76 RE-MGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSI--GYPGYA  150 (263)
T ss_pred             Hh-cCCCCEEEECCCCC-CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCc--CCCCcc
Confidence            76 78999999999975 345677889999999999999999999999999997754 68999999988765  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|+++.+++++++.++.++||+|++|+||+++|++......     . ... ....+..+|+ ++|..+.+++...
T Consensus       151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-----~-~~~-~~~~~~~~~~-~va~~i~~~~~~~  222 (263)
T PRK09072        151 SYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ-----A-LNR-ALGNAMDDPE-DVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc-----c-ccc-cccCCCCCHH-HHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999987543211     0 001 0112456777 9999999998754

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.2e-32  Score=226.31  Aligned_cols=222  Identities=28%  Similarity=0.454  Sum_probs=187.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+++++..+++...   +.++.++.+|++ +.++++++++++
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   78 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY---GVKVVIATADVS-DYEEVTAAIEQL   78 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---CCeEEEEECCCC-CHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988888777777432   336888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||+|.. ....+.+.+.+++++.+++|+.+++.+++++.++|.+.+ .+++|++||..+..  +.++..
T Consensus        79 ~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~~~  154 (239)
T PRK07666         79 KNELGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQK--GAAVTS  154 (239)
T ss_pred             HHHcCCccEEEEcCccc-cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhcc--CCCCCc
Confidence            99999999999999975 334566788999999999999999999999999997754 68999999988766  557778


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+.+|+++..+++.++.++.++||++++|.||.+.|++.......        ...| .....++ ++++.+..+++..
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~~-~~~~~~~-~~a~~~~~~l~~~  224 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--------DGNP-DKVMQPE-DLAEFIVAQLKLN  224 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--------ccCC-CCCCCHH-HHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999875432100        0012 2345666 9999999988754

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=233.99  Aligned_cols=220  Identities=28%  Similarity=0.381  Sum_probs=181.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|+++||||+||||++++++|+++|++|++++|+.++.+.           ...+.++.+|++ +.++++++++.+.+.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~D~~-d~~~~~~~~~~~~~~   70 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----------IPGVELLELDVT-DDASVQAAVDEVIAR   70 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----------cCCCeeEEeecC-CHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999998755432           124677899999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      ++++|++|||||.. ...+..+.+.+++++.+++|+.+++.++++++|+|++++ .++||++||..+..  +.+....|+
T Consensus        71 ~g~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~  146 (270)
T PRK06179         71 AGRIDVLVNNAGVG-LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFL--PAPYMALYA  146 (270)
T ss_pred             CCCCCEEEECCCCC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccC--CCCCccHHH
Confidence            99999999999986 445677889999999999999999999999999998754 78999999988876  567888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh----hhh---hhh--hcCCCCCCCCCChHHHHHHHH
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD----WLN---NVA--SRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~----~~~---~~~--~~~~p~~~~~~~~~~va~~~~  248 (280)
                      ++|++++.|++.++.|++++||++++|+||+++|++........    ...   ...  ....++.+...|+ +++..+.
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~  225 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPE-VVADTVV  225 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHH-HHHHHHH
Confidence            99999999999999999999999999999999999865432110    000   000  0012344556777 9999999


Q ss_pred             HhhcCC
Q 023555          249 YLVHDS  254 (280)
Q Consensus       249 ~l~s~~  254 (280)
                      .+++..
T Consensus       226 ~~~~~~  231 (270)
T PRK06179        226 KAALGP  231 (270)
T ss_pred             HHHcCC
Confidence            998754

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-32  Score=227.95  Aligned_cols=215  Identities=20%  Similarity=0.271  Sum_probs=175.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.+. +++..+++....  ..++.++.+|++ +.++++++++++.
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~--~~~v~~~~~D~~-~~~~~~~~~~~~~   83 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG--ASSVEVIDFDAL-DTDSHPKVIDAAF   83 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC--CCceEEEEecCC-ChHHHHHHHHHHH
Confidence            57899999999999999999999995 899999999876 777777776532  236788999999 7889999999887


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      + ++++|++|||+|........ ..+.++..+.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.++...
T Consensus        84 ~-~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~--~~~~~~~  158 (253)
T PRK07904         84 A-GGDVDVAIVAFGLLGDAEEL-WQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGER--VRRSNFV  158 (253)
T ss_pred             h-cCCCCEEEEeeecCCchhhc-ccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcC--CCCCCcc
Confidence            6 58999999999986332111 224556667899999999999999999998755 68999999987755  4567788


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      |++||+|+.+|+++++.|+.++||+|++|+||+++|++......           .|  ...+|+ ++|+.+...+...
T Consensus       159 Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-----------~~--~~~~~~-~~A~~i~~~~~~~  223 (253)
T PRK07904        159 YGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-----------AP--LTVDKE-DVAKLAVTAVAKG  223 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-----------CC--CCCCHH-HHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999998753211           11  123566 9999888887643

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=227.73  Aligned_cols=218  Identities=27%  Similarity=0.317  Sum_probs=181.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH-c
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA-F   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   98 (280)
                      |++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+.     +.++.++.+|++ +.++++++++.+.+. +
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~-~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-----AGNAWTGALDVT-DRAAWDAALADFAAATG   75 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCC-CHHHHHHHHHHHHHHcC
Confidence            789999999999999999999999999999999988877766553     236888999999 789999999988776 7


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||||... ...+.+.+.+++++.+++|+.+++.+++++.++|++.+ .++||++||..+..  +.++...|+.
T Consensus        76 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~~  151 (260)
T PRK08267         76 GRLDVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIY--GQPGLAVYSA  151 (260)
T ss_pred             CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCc--CCCCchhhHH
Confidence            89999999999863 35677889999999999999999999999999998654 68999999987766  5577889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ||++++.|+++++.++.++||++++|.||+++|++........... ..   ...+...+|+ ++++.+.+++.
T Consensus       152 sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~-~~---~~~~~~~~~~-~va~~~~~~~~  220 (260)
T PRK08267        152 TKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAG-ST---KRLGVRLTPE-DVAEAVWAAVQ  220 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhh-hH---hhccCCCCHH-HHHHHHHHHHh
Confidence            9999999999999999999999999999999999865411111111 11   1122235676 99999988885

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-32  Score=235.35  Aligned_cols=248  Identities=25%  Similarity=0.353  Sum_probs=194.2

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ....++.+++++|||+++|||+++|+.|+.+|++|++.+|+.++.++..++++... ....+.+.++|++ +.+++++++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~-~~~~i~~~~lDLs-sl~SV~~fa  105 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK-ANQKIRVIQLDLS-SLKSVRKFA  105 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEECCCC-CHHHHHHHH
Confidence            34457899999999999999999999999999999999999999999999998733 3457888999999 899999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---  168 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---  168 (280)
                      ++..+.++++|++|||||+...   ....+.|.++..|.+|+.|++.+++.++|.|++.. ++|||++||..+....   
T Consensus       106 ~~~~~~~~~ldvLInNAGV~~~---~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~  181 (314)
T KOG1208|consen  106 EEFKKKEGPLDVLINNAGVMAP---PFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLK  181 (314)
T ss_pred             HHHHhcCCCccEEEeCcccccC---CcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchh
Confidence            9999999999999999999743   23677789999999999999999999999998765 4999999997751100   


Q ss_pred             -------C-CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc-cccCccchhhhhhhhhcCCCCCCCCCC
Q 023555          169 -------Q-LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE-ITEGLMKKDWLNNVASRTYPLRDFGTT  239 (280)
Q Consensus       169 -------~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (280)
                             . +.....|+.||.++..+++.+++.+.. ||.+++++||.+.|+ +.+ .   ..+.....+...-...-++
T Consensus       182 ~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~---~~~~~~l~~~l~~~~~ks~  256 (314)
T KOG1208|consen  182 DLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-V---NLLLRLLAKKLSWPLTKSP  256 (314)
T ss_pred             hccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-c---hHHHHHHHHHHHHHhccCH
Confidence                   0 223335999999999999999999988 999999999999999 544 1   1111111111111111245


Q ss_pred             hHHHHHHHHHh-hcCCCCcccccEEEeCCcccCC
Q 023555          240 DPALTSLVRYL-VHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       240 ~~~va~~~~~l-~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      + .-|.+.+|+ ++++-...+|.. .-|+....+
T Consensus       257 ~-~ga~t~~~~a~~p~~~~~sg~y-~~d~~~~~~  288 (314)
T KOG1208|consen  257 E-QGAATTCYAALSPELEGVSGKY-FEDCAIAEP  288 (314)
T ss_pred             H-HHhhheehhccCccccCccccc-ccccccccc
Confidence            5 666666665 556677888865 445544433

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-32  Score=221.32  Aligned_cols=197  Identities=24%  Similarity=0.377  Sum_probs=165.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +++||||++|||+++++.|+++ ++|++++|+..                    .+.+|++ +.+++++++++    +++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~-~~~~~~~~~~~----~~~   55 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDIT-DPASIRALFEK----VGK   55 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCC-ChHHHHHHHHh----cCC
Confidence            7999999999999999999999 99999999742                    2588999 67778777664    478


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.|+|.+   .|+++++||..+..  +.+++..|+++|
T Consensus        56 id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~--~~~~~~~Y~~sK  129 (199)
T PRK07578         56 VDAVVSAAGKV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDE--PIPGGASAATVN  129 (199)
T ss_pred             CCEEEECCCCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCC--CCCCchHHHHHH
Confidence            99999999975 3456778899999999999999999999999999964   48999999988766  567889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccc
Q 023555          181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSG  260 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G  260 (280)
                      +|+++|+++++.|+ ++||+||+|+||+++|++....           ...|..+..+|+ |+|+.+.++++   .+++|
T Consensus       130 ~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~-~~a~~~~~~~~---~~~~g  193 (199)
T PRK07578        130 GALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYG-----------PFFPGFEPVPAA-RVALAYVRSVE---GAQTG  193 (199)
T ss_pred             HHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhh-----------hcCCCCCCCCHH-HHHHHHHHHhc---cceee
Confidence            99999999999999 8899999999999999874210           012333456677 99999888886   36899


Q ss_pred             cEEEe
Q 023555          261 NIFIV  265 (280)
Q Consensus       261 ~~i~v  265 (280)
                      +.+.+
T Consensus       194 ~~~~~  198 (199)
T PRK07578        194 EVYKV  198 (199)
T ss_pred             EEecc
Confidence            98875

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=7.1e-32  Score=224.16  Aligned_cols=192  Identities=32%  Similarity=0.469  Sum_probs=174.9

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..+..+|.|+|||+-+|.|+.+|++|.++|++|++.+.+++.++....+..     ..+...+.+|++ ++++++++.+.
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-----s~rl~t~~LDVT-~~esi~~a~~~   97 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-----SPRLRTLQLDVT-KPESVKEAAQW   97 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-----CCcceeEeeccC-CHHHHHHHHHH
Confidence            346789999999999999999999999999999999998888888777663     236777799999 78999999999


Q ss_pred             HHHHcC--CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           94 AWEAFG--RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        94 ~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +.+..+  ++-.||||||+....++.+-.+.+++++.+++|+.|++.++++++|.+++.  .||||++||+.+..  +.|
T Consensus        98 V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~--~~p  173 (322)
T KOG1610|consen   98 VKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRV--ALP  173 (322)
T ss_pred             HHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCc--cCc
Confidence            988654  589999999988888888899999999999999999999999999999875  59999999999977  678


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~  215 (280)
                      ....|++||.|++.|+.++.+|+.+.||.|..|.||..+|++..
T Consensus       174 ~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  174 ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            89999999999999999999999999999999999999999875

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=1.5e-31  Score=211.64  Aligned_cols=228  Identities=29%  Similarity=0.367  Sum_probs=178.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHh-CCeE-EEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKA-GCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~-G~~v-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .-|.++||||++|||..++++|.+. |..+ +.++|+.+++   .++++.......++..+++|++ ..+++.++++++.
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt-~deS~~~~~~~V~   77 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVT-CDESIDNFVQEVE   77 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecc-cHHHHHHHHHHHH
Confidence            4567999999999999999999975 5555 5566767775   3344444445568999999999 6799999999999


Q ss_pred             HH--cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC----------CCeEEEEeccc
Q 023555           96 EA--FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ----------EGSVINISSIA  163 (280)
Q Consensus        96 ~~--~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----------~g~vv~vsS~~  163 (280)
                      +-  ..++|++|||||+..+.....+.+.+.|.+.+++|+.|++.+.|+|+|++++...          .+.|||+||..
T Consensus        78 ~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   78 KIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             hhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence            87  4579999999999877677778889999999999999999999999999987431          23799999876


Q ss_pred             cccCC-CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHH
Q 023555          164 ATSRG-QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       164 ~~~~~-~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      +...+ ...++.+|.+||+|+++|+|+++.|+++.+|-|..++||||.|+|.....                 ..+++ |
T Consensus       158 ~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a-----------------~ltve-e  219 (249)
T KOG1611|consen  158 GSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA-----------------ALTVE-E  219 (249)
T ss_pred             cccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc-----------------ccchh-h
Confidence            65332 33467899999999999999999999999999999999999999976321                 12454 3


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCC
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      -+.-+.--...-...-+|-.++-|+
T Consensus       220 Sts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  220 STSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             hHHHHHHHHHhcCcccCcceEccCC
Confidence            3333333333344455787777765

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-31  Score=221.80  Aligned_cols=215  Identities=26%  Similarity=0.351  Sum_probs=181.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|+++||||++|||++++++|+++|++|++++|+.++++++.+++.+.. .+.++.++.+|++ +.++++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY-PGIKVAVAALDVN-DHDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence            7899999999999999999999999999999999988888777765543 2347888999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC-CCCCh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG-GVAYA  177 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~-~~~Y~  177 (280)
                      +++|++|||||+. ......+.+.+.+++.+++|+.+++.+++++++.|++.+ .+++|++||..+..  +.++ ...|+
T Consensus        80 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~~Y~  155 (248)
T PRK08251         80 GGLDRVIVNAGIG-KGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVR--GLPGVKAAYA  155 (248)
T ss_pred             CCCCEEEECCCcC-CCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEecccccc--CCCCCcccHH
Confidence            9999999999986 334566778899999999999999999999999997754 67999999987765  3443 67899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .||++++.+++.++.++...||++++|+||+++|++......             .....+++ ++++.+...+..
T Consensus       156 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~-~~a~~i~~~~~~  217 (248)
T PRK08251        156 ASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTE-TGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHH-HHHHHHHHHHhc
Confidence            999999999999999999889999999999999998653211             11234555 888877776654

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-31  Score=224.74  Aligned_cols=225  Identities=28%  Similarity=0.454  Sum_probs=185.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++++|||||+++||+++++.|+++|++|++++|+..+.+...+++...   +.++.++.+|++ +.++++++++++.+.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~   76 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH---GGEALVVPTDVS-DAEACERLIEAAVARF   76 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999988887777776543   236778899999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCC-CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDL-TEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      +++|++|||+|... ...+.+. +.+++.+.+++|+.+++.+++.+.++|.+.  .+++|++||..+..  +.++...|+
T Consensus        77 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~~~Y~  151 (263)
T PRK06181         77 GGIDILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLT--GVPTRSGYA  151 (263)
T ss_pred             CCCCEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccC--CCCCccHHH
Confidence            99999999999763 3456666 889999999999999999999999999753  58999999988765  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      ++|++++.++++++.++.+++++++++.||++.|++......... ...........++.+|+ |+++.+.++++..
T Consensus       152 ~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-dva~~i~~~~~~~  226 (263)
T PRK06181        152 ASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDG-KPLGKSPMQESKIMSAE-ECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccc-cccccccccccCCCCHH-HHHHHHHHHhhCC
Confidence            999999999999999999999999999999999998654321110 00010101123677887 9999999999743

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=225.01  Aligned_cols=225  Identities=23%  Similarity=0.316  Sum_probs=179.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH-HHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK-AWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   98 (280)
                      +++|||||++|||++++++|+++|++|++++|+.++..  .    ..  .+.++.++.+|++ +.+++++++++ +.+.+
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~----~~--~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~   72 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A----AA--AGERLAEVELDLS-DAAAAAAWLAGDLLAAF   72 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h----hc--cCCeEEEEEeccC-CHHHHHHHHHHHHHHHh
Confidence            37999999999999999999999999999999865321  1    11  1236788999999 78889997776 55544


Q ss_pred             ---CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           99 ---GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        99 ---g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                         +++|++|||+|...+..+..+.+.+++++.+++|+.+++.+++.+.+.|.++ ..++||++||..+..  +.+++..
T Consensus        73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~--~~~~~~~  149 (243)
T PRK07023         73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-AERRILHISSGAARN--AYAGWSV  149 (243)
T ss_pred             ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-CCCEEEEEeChhhcC--CCCCchH
Confidence               4799999999986555567778999999999999999999999999999764 368999999988765  6678899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-----hhhhhhhhcCCCCCCCCCChHHHHH-HHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-----DWLNNVASRTYPLRDFGTTDPALTS-LVRY  249 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~va~-~~~~  249 (280)
                      |+++|++++.+++.++.+ .+.||++++|+||+++|++.......     +.... .....|.++..+|+ |+|. ++.+
T Consensus       150 Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~va~~~~~~  226 (243)
T PRK07023        150 YCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRER-FRELKASGALSTPE-DAARRLIAY  226 (243)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHH-HHHhhhcCCCCCHH-HHHHHHHHH
Confidence            999999999999999999 77899999999999999975432110     11111 22235778888998 8998 7788


Q ss_pred             hhcCCCCccc
Q 023555          250 LVHDSSEYVS  259 (280)
Q Consensus       250 l~s~~~~~i~  259 (280)
                      |+++.-...+
T Consensus       227 l~~~~~~~~~  236 (243)
T PRK07023        227 LLSDDFGSTP  236 (243)
T ss_pred             HhccccCCCC
Confidence            8877644433

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-31  Score=224.55  Aligned_cols=182  Identities=32%  Similarity=0.459  Sum_probs=161.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||++|||+++++.|+++|++|++++|+.++++...+    .     .+.++.+|++ +.++++++++++.+.++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~-----~~~~~~~Dl~-~~~~~~~~~~~~~~~~~   71 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A-----GFTAVQLDVN-DGAALARLAEELEAEHG   71 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C-----CCeEEEeeCC-CHHHHHHHHHHHHHhcC
Confidence            789999999999999999999999999999999876654321    1     3567889999 78999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++|||||.. ...+..+.+.+++++.+++|+.+++.++++++|.|++.  .|++|++||..+..  +.++...|+++
T Consensus        72 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y~~s  146 (274)
T PRK05693         72 GLDVLINNAGYG-AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVL--VTPFAGAYCAS  146 (274)
T ss_pred             CCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccC--CCCCccHHHHH
Confidence            999999999975 44567788999999999999999999999999999753  58999999988766  55778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      |++++.|+++++.|++++||+|++|+||+++|++...
T Consensus       147 K~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        147 KAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            9999999999999999999999999999999998654

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=219.32  Aligned_cols=213  Identities=23%  Similarity=0.319  Sum_probs=178.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|+++||||++|||++++++|+++|++|++++|++++.+...+++....  ..++.++.+|++ +.++++++++++.+  
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~-~~~~~~~~~~~~~~--   75 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG--AVAVSTHELDIL-DTASHAAFLDSLPA--   75 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc--CCeEEEEecCCC-ChHHHHHHHHHHhh--
Confidence            3689999999999999999999999999999999988877777665432  236888999999 77888888887754  


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                       .+|++|||+|.... ....+.+.+++.+.+++|+.+++.+++++.|+|.+.+ .+++|++||..+..  +.++...|++
T Consensus        76 -~~d~vv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~~  150 (243)
T PRK07102         76 -LPDIVLIAVGTLGD-QAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDR--GRASNYVYGS  150 (243)
T ss_pred             -cCCEEEECCcCCCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccC--CCCCCcccHH
Confidence             47999999997643 4566788999999999999999999999999998754 68999999987765  5577889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      +|+++++++++++.++++.||+|++|+||+++|++.....            .|.....+|+ ++++.+..+++..
T Consensus       151 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~-~~a~~i~~~~~~~  213 (243)
T PRK07102        151 AKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPE-EVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHH-HHHHHHHHHHhCC
Confidence            9999999999999999999999999999999998754321            2333345676 9999888888754

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-30  Score=222.43  Aligned_cols=236  Identities=26%  Similarity=0.366  Sum_probs=186.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|++|||||+|+||++++++|+++|++|++++|+.+.++.+.+..      ..++.++.+|++ +.++++++++++.+.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   74 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY------GDRLWVLQLDVT-DSAAVRAVVDRAFAAL   74 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCceEEEEccCC-CHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999987766654433      125778899999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||||... ..+..+.+.+++++.+++|+.+++.++++++|+|++++ .+++|++||..+..  +.++...|++
T Consensus        75 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~~  150 (276)
T PRK06482         75 GRIDVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQI--AYPGFSLYHA  150 (276)
T ss_pred             CCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccc--CCCCCchhHH
Confidence            99999999999863 35666778899999999999999999999999997644 68999999987765  5678899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-----------hhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-----------DWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-----------~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      ||++++.|+++++.+++++||+++.++||.+.|++.......           ....+.... -+..-...|+ ++++++
T Consensus       151 sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~-~~~~a~  228 (276)
T PRK06482        151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAIPGDPQ-KMVQAM  228 (276)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCCCCCCHH-HHHHHH
Confidence            999999999999999999999999999999999875432110           011111111 1112235677 899888


Q ss_pred             HHhhcCCCCcccccEEEeCCccc
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ...+...   ..+..+.+.+|-.
T Consensus       229 ~~~~~~~---~~~~~~~~g~~~~  248 (276)
T PRK06482        229 IASADQT---PAPRRLTLGSDAY  248 (276)
T ss_pred             HHHHcCC---CCCeEEecChHHH
Confidence            7776532   2245566665543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=228.28  Aligned_cols=206  Identities=25%  Similarity=0.320  Sum_probs=166.5

Q ss_pred             HHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCC
Q 023555           35 FCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV  114 (280)
Q Consensus        35 ~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  114 (280)
                      +|++|+++|++|++++|+.++.+.              ..++.+|++ +.++++++++++.   +++|+||||||.... 
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~--------------~~~~~~Dl~-~~~~v~~~~~~~~---~~iD~li~nAG~~~~-   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL--------------DGFIQADLG-DPASIDAAVAALP---GRIDALFNIAGVPGT-   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh--------------hHhhcccCC-CHHHHHHHHHHhc---CCCeEEEECCCCCCC-
Confidence            478999999999999998765321              124689999 7888998888763   689999999997521 


Q ss_pred             CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC-------------------------CC
Q 023555          115 KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR-------------------------GQ  169 (280)
Q Consensus       115 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~-------------------------~~  169 (280)
                              +++++.+++|+.+++.+++.++|+|.+   .|+||++||..+...                         .+
T Consensus        62 --------~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         62 --------APVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             --------CCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccC
Confidence                    247889999999999999999999954   489999999877521                         14


Q ss_pred             CCCCCCChhhHHHHHHHHHHHH-HHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLS-LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la-~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      .++...|++||+|++.|++.++ .+++++||+||+|+||.++|++..................|++++.+|+ |+|+.+.
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~va~~~~  209 (241)
T PRK12428        131 VALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATAD-EQAAVLV  209 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHH-HHHHHHH
Confidence            4677899999999999999999 9999999999999999999998764322110011111235888899998 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||+++.+.+++|+.+.+|||+..
T Consensus       210 ~l~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        210 FLCSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             HHcChhhcCccCcEEEecCchHH
Confidence            99999899999999999999764

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-30  Score=216.13  Aligned_cols=227  Identities=29%  Similarity=0.437  Sum_probs=190.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +.+.+++++||||+|+||++++++|+++|++|++++|++++++++.+++.+.    .++.++.+|++ +.+++.++++++
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~D~~-~~~~~~~~~~~~   76 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK----GNVLGLAADVR-DEADVQRAVDAI   76 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc----CcEEEEEccCC-CHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999998888777776532    36778999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+++++++.|.+ + .+++|++||..+..  +.++..
T Consensus        77 ~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~iv~~ss~~~~~--~~~~~~  151 (237)
T PRK07326         77 VAAFGGLDVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-G-GGYIINISSLAGTN--FFAGGA  151 (237)
T ss_pred             HHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-C-CeEEEEECChhhcc--CCCCCc
Confidence            99999999999999875 3356677899999999999999999999999999943 3 58999999987765  556778


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.+++.++.++...|+++++|+||++.|++........           .....+++ |+++.+.++++..
T Consensus       152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----------~~~~~~~~-d~a~~~~~~l~~~  219 (237)
T PRK07326        152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----------DAWKIQPE-DIAQLVLDLLKMP  219 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----------hhccCCHH-HHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999998754322110           00123566 9999999999887


Q ss_pred             CCcccccEE
Q 023555          255 SEYVSGNIF  263 (280)
Q Consensus       255 ~~~i~G~~i  263 (280)
                      ...+.++.-
T Consensus       220 ~~~~~~~~~  228 (237)
T PRK07326        220 PRTLPSKIE  228 (237)
T ss_pred             ccccccceE
Confidence            766666544

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.98  E-value=9.5e-31  Score=249.17  Aligned_cols=220  Identities=28%  Similarity=0.354  Sum_probs=183.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..++++|+++||||++|||+++++.|+++|++|++++|+++.+++..+++...   +.++.++.+|++ +.+++++++++
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~~~~~~~~  441 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK---GGTAHAYTCDLT-DSAAVDHTVKD  441 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888777553   236888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCC--CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLD--LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +.+.++++|++|||||.... ..+.+  .+.+++++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.+
T Consensus       442 ~~~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~  517 (657)
T PRK07201        442 ILAEHGHVDYLVNNAGRSIR-RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQT--NAP  517 (657)
T ss_pred             HHHhcCCCCEEEECCCCCCC-CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcC--CCC
Confidence            99999999999999997522 22222  23688999999999999999999999998754 68999999988776  557


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||+++++|+++++.|++++||+||+|+||+++|++......           .+.....+|+ ++|+.+...+
T Consensus       518 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~-~~a~~i~~~~  585 (657)
T PRK07201        518 RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPE-EAADMVVRAI  585 (657)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHH-HHHHHHHHHH
Confidence            888999999999999999999999999999999999999998653210           1112234666 8888877765


Q ss_pred             cC
Q 023555          252 HD  253 (280)
Q Consensus       252 s~  253 (280)
                      ..
T Consensus       586 ~~  587 (657)
T PRK07201        586 VE  587 (657)
T ss_pred             Hh
Confidence            43

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.98  E-value=1.1e-31  Score=223.07  Aligned_cols=193  Identities=26%  Similarity=0.381  Sum_probs=169.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|++++|||||.|||++.|++||++|.+|++++|++++++...+++.+.++  +.+..+.+|++++.+..+++.+.+..
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~--vev~~i~~Dft~~~~~ye~i~~~l~~  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK--VEVRIIAIDFTKGDEVYEKLLEKLAG  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC--cEEEEEEEecCCCchhHHHHHHHhcC
Confidence            3459999999999999999999999999999999999999999999999876  67888999999654445555554433


Q ss_pred             HcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        97 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                        .++.+||||+|... .+..+.+.+.+.+++.+.+|..+...+.+.++|.|.+++ .|-|||+||..+..  +.|.++.
T Consensus       125 --~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~--p~p~~s~  199 (312)
T KOG1014|consen  125 --LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLI--PTPLLSV  199 (312)
T ss_pred             --CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccc--cChhHHH
Confidence              37888999999874 234566777779999999999999999999999998754 89999999999987  8899999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      |+++|+.+..|+++|+.||..+||.|-+|.|..|.|.|...
T Consensus       200 ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  200 YSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            99999999999999999999999999999999999999753

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5e-30  Score=215.02  Aligned_cols=204  Identities=23%  Similarity=0.319  Sum_probs=165.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++++||||++|||+++++.|+++|++|++++|+++.++++.+.       ..++.++.+|++ +.++++++++++..   
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~D~~-~~~~~~~~~~~~~~---   70 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-------SANIFTLAFDVT-DHPGTKAALSQLPF---   70 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-------cCCCeEEEeeCC-CHHHHHHHHHhccc---
Confidence            7899999999999999999999999999999998776655432       125678899999 78899998887642   


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      .+|.+|||+|... ..+....+.++|++.+++|+.+++.+++++.|+|.+   ++++|++||..+..  +.+++..|+++
T Consensus        71 ~~d~~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~--~~~~~~~Y~as  144 (240)
T PRK06101         71 IPELWIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASEL--ALPRAEAYGAS  144 (240)
T ss_pred             CCCEEEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhcc--CCCCCchhhHH
Confidence            5799999998642 223445788999999999999999999999999954   47899999988766  56788899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      |+++++|++.++.|+.++||++++|.||+++|++......          ..|  ...+|+ +++..+...+..
T Consensus       145 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~----------~~~--~~~~~~-~~a~~i~~~i~~  205 (240)
T PRK06101        145 KAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF----------AMP--MIITVE-QASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC----------CCC--cccCHH-HHHHHHHHHHhc
Confidence            9999999999999999999999999999999998643110          011  124565 888877665543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=8.1e-31  Score=205.28  Aligned_cols=185  Identities=28%  Similarity=0.413  Sum_probs=163.2

Q ss_pred             CCcEEEEecCC-ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~-~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +.|.+||||++ ||||.++|++|++.|+.|+.+.|.-+...++....        .+....+|++ +++++.....++.+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~--------gl~~~kLDV~-~~~~V~~v~~evr~   76 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF--------GLKPYKLDVS-KPEEVVTVSGEVRA   76 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh--------CCeeEEeccC-ChHHHHHHHHHHhh
Confidence            46788888876 89999999999999999999999987766654332        4777899999 78999999999987


Q ss_pred             -HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           97 -AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        97 -~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                       .+|++|+|+||||.. =..|..+.+.++.++.|++|++|.++++|++...+.+ . +|.|||++|..+..  ++|..+.
T Consensus        77 ~~~Gkld~L~NNAG~~-C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-a-KGtIVnvgSl~~~v--pfpf~~i  151 (289)
T KOG1209|consen   77 NPDGKLDLLYNNAGQS-CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-A-KGTIVNVGSLAGVV--PFPFGSI  151 (289)
T ss_pred             CCCCceEEEEcCCCCC-cccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-c-cceEEEecceeEEe--ccchhhh
Confidence             789999999999985 3457778999999999999999999999999855544 3 69999999999988  7788899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      |++||+|++.+++.|..|+++.||+|..+.||.+.|++...
T Consensus       152 YsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  152 YSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             hhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999999999999999999999999999999998654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.1e-29  Score=201.01  Aligned_cols=163  Identities=36%  Similarity=0.567  Sum_probs=148.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC--hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR--VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |+++||||++|||++++++|+++|. +|++++|+  .+..++..+++...   +.++.++++|++ +.++++++++++.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~   76 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP---GAKITFIECDLS-DPESIRALIEEVIK   76 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT---TSEEEEEESETT-SHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc---cccccccccccc-cccccccccccccc
Confidence            7999999999999999999999966 68899998  67778887877743   358899999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||+|... .+++.+.+.++|++++++|+.+++.+.++++|   + + +|+||++||..+..  +.+++..|
T Consensus        77 ~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~-~-~g~iv~~sS~~~~~--~~~~~~~Y  148 (167)
T PF00106_consen   77 RFGPLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP---Q-G-GGKIVNISSIAGVR--GSPGMSAY  148 (167)
T ss_dssp             HHSSESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---H-T-TEEEEEEEEGGGTS--SSTTBHHH
T ss_pred             cccccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee---c-c-ccceEEecchhhcc--CCCCChhH
Confidence            9999999999999975 67788889999999999999999999999999   2 2 79999999999987  77899999


Q ss_pred             hhhHHHHHHHHHHHHHHh
Q 023555          177 ASSKAGLNAMTKCLSLEL  194 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~  194 (280)
                      +++|+|+.+|++++++|+
T Consensus       149 ~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  149 SASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.3e-28  Score=205.94  Aligned_cols=183  Identities=27%  Similarity=0.426  Sum_probs=158.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +++++|+++||||+|+||+++|+.|+++|+ +|++++|+.+++++          .+.++.++.+|++ +.++++++++.
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----------~~~~~~~~~~D~~-~~~~~~~~~~~   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----------LGPRVVPLQLDVT-DPASVAAAAEA   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----------cCCceEEEEecCC-CHHHHHHHHHh
Confidence            568899999999999999999999999999 99999998766543          1236778899999 66777666654


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                          ++++|++||++|.......+.+.+.+++.+.+++|+.+++.+++++.+.+.+.+ .+++|++||..+..  +.+++
T Consensus        71 ----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~--~~~~~  143 (238)
T PRK08264         71 ----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWV--NFPNL  143 (238)
T ss_pred             ----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcc--CCCCc
Confidence                568999999999844555677889999999999999999999999999997654 78999999988765  56778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~  215 (280)
                      ..|+.+|++++.+++.++.++.++|++++++.||.++|++..
T Consensus       144 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~  185 (238)
T PRK08264        144 GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA  185 (238)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc
Confidence            899999999999999999999999999999999999998854

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.7e-29  Score=205.51  Aligned_cols=183  Identities=27%  Similarity=0.359  Sum_probs=153.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+++||||++|||+++++.|+++|++|++++|+++..+++. ++       .++.+..+|++ +.++++++++.+.+  +
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~-------~~~~~~~~D~~-d~~~~~~~~~~~~~--~   70 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL-------PGVHIEKLDMN-DPASLDQLLQRLQG--Q   70 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc-------cccceEEcCCC-CHHHHHHHHHHhhc--C
Confidence            78999999999999999999999999999999987655432 11       14566789999 78899999988754  4


Q ss_pred             CccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-CCCCCCCCh
Q 023555          100 RIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-QLPGGVAYA  177 (280)
Q Consensus       100 ~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-~~~~~~~Y~  177 (280)
                      ++|++|||+|...+. .++.+.+.+++.+.+++|+.+++.+.++++++|++.  .++++++||..+.... +..++..|+
T Consensus        71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y~  148 (225)
T PRK08177         71 RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLYK  148 (225)
T ss_pred             CCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccchH
Confidence            899999999986432 356678899999999999999999999999999652  4799999987664321 223567899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~  215 (280)
                      ++|++++.|+++++.+++++||+||+|+||+++|++..
T Consensus       149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            99999999999999999999999999999999999864

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=7e-29  Score=205.88  Aligned_cols=192  Identities=25%  Similarity=0.280  Sum_probs=178.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +.++||||++|||+++|+.+..+|++|.++.|+.+++.+++++++-..... ++.+..+|+. +.+++..+++++.+..+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~-~v~~~S~d~~-~Y~~v~~~~~~l~~~~~  111 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVE-DVSYKSVDVI-DYDSVSKVIEELRDLEG  111 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccc-eeeEeccccc-cHHHHHHHHhhhhhccC
Confidence            799999999999999999999999999999999999999999998776543 3788999997 89999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      .+|.+|+|||.. ..+.+.+.+.++++..+++|+.++++.+++.++.|++....|+|+.+||..+..  +..++++|+++
T Consensus       112 ~~d~l~~cAG~~-v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~--~i~GysaYs~s  188 (331)
T KOG1210|consen  112 PIDNLFCCAGVA-VPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML--GIYGYSAYSPS  188 (331)
T ss_pred             CcceEEEecCcc-cccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc--CcccccccccH
Confidence            999999999986 567889999999999999999999999999999999876677999999988876  77899999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      |.|+.+|+..++.|..++||+|.+..|+.+.||..+.
T Consensus       189 K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~  225 (331)
T KOG1210|consen  189 KFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER  225 (331)
T ss_pred             HHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc
Confidence            9999999999999999999999999999999997653

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.6e-28  Score=207.55  Aligned_cols=224  Identities=25%  Similarity=0.353  Sum_probs=176.9

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|+++||||+|+||+++++.|+++|++|++++|+.++++.+.+    .     .+..+.+|++ +.++++.+++.+.+..
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~-----~~~~~~~D~~-~~~~~~~~~~~i~~~~   71 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----L-----GFTGILLDLD-DPESVERAADEVIALT   71 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----C-----CCeEEEeecC-CHHHHHHHHHHHHHhc
Confidence            3789999999999999999999999999999999877654321    1     3567889998 7788899888887643


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           99 -GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        99 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                       +++|.+|||+|.. ...++.+.+.+++++.+++|+.|++.+++.+++.|.+.+ .+++|++||..+..  +.++...|+
T Consensus        72 ~~~~~~ii~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~~~~Y~  147 (256)
T PRK08017         72 DNRLYGLFNNAGFG-VYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLI--STPGRGAYA  147 (256)
T ss_pred             CCCCeEEEECCCCC-CccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCccccc--CCCCccHHH
Confidence             6899999999975 335666789999999999999999999999999998754 68999999987765  557888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      ++|++++.++++++.++.++++++++|.||.+.|++......................+..|+ |+++.+..+++.....
T Consensus       148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        148 ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPE-AVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHH-HHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999987654321110000000000012346777 9999998888765443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7e-28  Score=203.80  Aligned_cols=183  Identities=26%  Similarity=0.422  Sum_probs=156.9

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.....   ..++.++.+|++ +.++++++++      
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~------   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR---GLALRVEKLDLT-DAIDRAQAAE------   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeeCC-CHHHHHHHhc------
Confidence            679999999999999999999999999999999987776665554332   235778899999 6666666543      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||||.. ...+..+.+.+++++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..  +.++...|++
T Consensus        72 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~--~~~~~~~Y~~  147 (257)
T PRK09291         72 WDVDVLLNNAGIG-EAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLI--TGPFTGAYCA  147 (257)
T ss_pred             CCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhcc--CCCCcchhHH
Confidence            3899999999986 445777889999999999999999999999999998755 58999999987765  4467789999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~  215 (280)
                      ||++++.+++.++.++.+.||++++|+||++.|++..
T Consensus       148 sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        148 SKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            9999999999999999999999999999999998754

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.4e-28  Score=202.51  Aligned_cols=197  Identities=16%  Similarity=0.192  Sum_probs=146.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++|+++||||++|||++++++|+++|++|++++|+.....+.  .. .    . ....+.+|++ +.++++       
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~-~----~-~~~~~~~D~~-~~~~~~-------   74 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--ND-E----S-PNEWIKWECG-KEESLD-------   74 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hc-c----C-CCeEEEeeCC-CHHHHH-------
Confidence            68999999999999999999999999999999999986322111  11 1    1 1246789998 555544       


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.++++|++|||||...    ..+.+.+++++.+++|+.+++.++|+++|.|.+++  .++.+++.+|..+..  + ++.
T Consensus        75 ~~~~~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~--~-~~~  147 (245)
T PRK12367         75 KQLASLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ--P-ALS  147 (245)
T ss_pred             HhcCCCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC--C-CCC
Confidence            34578999999999742    23467899999999999999999999999997631  133444445554432  2 356


Q ss_pred             CCChhhHHHHHHH---HHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          174 VAYASSKAGLNAM---TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       174 ~~Y~~sK~a~~~l---~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ..|++||+|+..+   .+.++.++.+.|++|+++.||+++|++..                 . ...+|+ ++|+.+.+.
T Consensus       148 ~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-----------------~-~~~~~~-~vA~~i~~~  208 (245)
T PRK12367        148 PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-----------------I-GIMSAD-FVAKQILDQ  208 (245)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-----------------c-CCCCHH-HHHHHHHHH
Confidence            7899999998644   45555566788999999999999988631                 0 134566 999988888


Q ss_pred             hcCC
Q 023555          251 VHDS  254 (280)
Q Consensus       251 ~s~~  254 (280)
                      +...
T Consensus       209 ~~~~  212 (245)
T PRK12367        209 ANLG  212 (245)
T ss_pred             HhcC
Confidence            8643

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.7e-29  Score=200.11  Aligned_cols=238  Identities=19%  Similarity=0.224  Sum_probs=182.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ..+|.+|+||+++|||..+++.+.+.+......+++...++  .+.+.-.++  ........|.+ ...-..++++...+
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g--d~~v~~~g~~~-e~~~l~al~e~~r~   78 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG--DDFVHVVGDIT-EEQLLGALREAPRK   78 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec--CCcceechHHH-HHHHHHHHHhhhhh
Confidence            35788999999999999999988888776554444433222  222222222  24455667777 55667888888888


Q ss_pred             HcCCccEEEECCCCCCCCCCCC--CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .++..|++|||||..++-....  ..+.++|++.++.|+++.+.+.+.++|.+++..-.+.+||+||..+..  ++++|+
T Consensus        79 k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~--p~~~wa  156 (253)
T KOG1204|consen   79 KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR--PFSSWA  156 (253)
T ss_pred             cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc--cccHHH
Confidence            8999999999999887655444  778999999999999999999999999998753358999999999887  889999


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch----hhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK----DWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      .||++|+|.++|.+.+|.|-. .+++|.+++||.++|+|...+...    +....+.....-.+++..|. ..+..+..|
T Consensus       157 ~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~-~~a~~l~~L  234 (253)
T KOG1204|consen  157 AYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQ-VTAKVLAKL  234 (253)
T ss_pred             HhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChh-hHHHHHHHH
Confidence            999999999999999999976 799999999999999997654321    11122222223456777787 888888888


Q ss_pred             hcCCCCcccccEEE
Q 023555          251 VHDSSEYVSGNIFI  264 (280)
Q Consensus       251 ~s~~~~~i~G~~i~  264 (280)
                      +-... +.+|+++.
T Consensus       235 ~e~~~-f~sG~~vd  247 (253)
T KOG1204|consen  235 LEKGD-FVSGQHVD  247 (253)
T ss_pred             HHhcC-cccccccc
Confidence            74333 89998765

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.3e-27  Score=195.61  Aligned_cols=216  Identities=26%  Similarity=0.338  Sum_probs=169.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+++||||+++||+++++.|+++|++|++++|+.+..+++..    .     .+.++.+|++ +.++++++++++..  +
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~-----~~~~~~~D~~-~~~~v~~~~~~~~~--~   69 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L-----GAEALALDVA-DPASVAGLAWKLDG--E   69 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c-----cceEEEecCC-CHHHHHHHHHHhcC--C
Confidence            689999999999999999999999999999999776654321    1     2447899999 67888888776532  4


Q ss_pred             CccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-CCCCCCCCh
Q 023555          100 RIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-QLPGGVAYA  177 (280)
Q Consensus       100 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-~~~~~~~Y~  177 (280)
                      ++|++|||+|.... ..+..+.+.+++++.+++|+.+++.+++++.|+|.+.  .|++|+++|..+.... +......|+
T Consensus        70 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y~  147 (222)
T PRK06953         70 ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYR  147 (222)
T ss_pred             CCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCccccH
Confidence            79999999998632 2345577899999999999999999999999999653  5799999997664421 111223699


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      ++|++++.+++.++.++  .++++|+|+||+++|++....             .+    ..++ +.+..+..++......
T Consensus       148 ~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~-------------~~----~~~~-~~~~~~~~~~~~~~~~  207 (222)
T PRK06953        148 ASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ-------------AA----LDPA-QSVAGMRRVIAQATRR  207 (222)
T ss_pred             HhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC-------------CC----CCHH-HHHHHHHHHHHhcCcc
Confidence            99999999999999987  479999999999999985421             11    2344 7777777766666678


Q ss_pred             ccccEEEeCCcc
Q 023555          258 VSGNIFIVDSGA  269 (280)
Q Consensus       258 i~G~~i~vdgG~  269 (280)
                      .+|+.+..|++.
T Consensus       208 ~~~~~~~~~~~~  219 (222)
T PRK06953        208 DNGRFFQYDGVE  219 (222)
T ss_pred             cCceEEeeCCcC
Confidence            899999888763

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.8e-26  Score=190.32  Aligned_cols=219  Identities=28%  Similarity=0.456  Sum_probs=173.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|++|||||+++||+++++.|+++ ++|++++|+.++.++..++..       .+.++.+|++ +.+++++++++    +
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~-~~~~~~~~~~~----~   69 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELP-------GATPFPVDLT-DPEAIAAAVEQ----L   69 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhc-------cceEEecCCC-CHHHHHHHHHh----c
Confidence            579999999999999999999999 999999999876655443321       3667899999 66777666654    4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++||++|... ..+..+.+.+++.+.+++|+.+++.+.+.+++.|++.  .+++|++||..+..  +.++...|+.
T Consensus        70 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~--~~~~~~~y~~  144 (227)
T PRK08219         70 GRLDVLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLR--ANPGWGSYAA  144 (227)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcC--cCCCCchHHH
Confidence            58999999999853 3456678899999999999999999999999999764  57999999988765  5567889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcc
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYV  258 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i  258 (280)
                      +|++++.+++.++.++... +++++|.||.+.+++........      ....+.+++..++ |+++.+.++++...   
T Consensus       145 ~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~------~~~~~~~~~~~~~-dva~~~~~~l~~~~---  213 (227)
T PRK08219        145 SKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE------GGEYDPERYLRPE-TVAKAVRFAVDAPP---  213 (227)
T ss_pred             HHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh------ccccCCCCCCCHH-HHHHHHHHHHcCCC---
Confidence            9999999999999988766 99999999999887654322111      1123445677888 99999999986543   


Q ss_pred             cccEEEeC
Q 023555          259 SGNIFIVD  266 (280)
Q Consensus       259 ~G~~i~vd  266 (280)
                      .|.++.++
T Consensus       214 ~~~~~~~~  221 (227)
T PRK08219        214 DAHITEVV  221 (227)
T ss_pred             CCccceEE
Confidence            34444443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=7.9e-25  Score=194.44  Aligned_cols=197  Identities=21%  Similarity=0.279  Sum_probs=147.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++|+++||||++|||+++++.|+++|++|++++|++++++...+   +.   ...+..+.+|++ +.+++.+.     
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~---~~~v~~v~~Dvs-d~~~v~~~-----  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE---DLPVKTLHWQVG-QEAALAEL-----  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc---CCCeEEEEeeCC-CHHHHHHH-----
Confidence            5789999999999999999999999999999999998766543221   11   124567889999 55554433     


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC---CCeEEEEeccccccCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ---EGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~g~vv~vsS~~~~~~~~~~~  172 (280)
                        ++++|++|||||...    ..+.+.+++++.+++|+.+++.++++++|.|++++.   ++.+|++|+ .. .  ..+.
T Consensus       243 --l~~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~--~~~~  312 (406)
T PRK07424        243 --LEKVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-V--NPAF  312 (406)
T ss_pred             --hCCCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-c--cCCC
Confidence              458999999999752    235788999999999999999999999999977532   234666654 32 2  2244


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      .+.|++||+|+..|+. +.++.  .++.+..+.||+++|++..                 . ...+|+ ++|+.+.+.++
T Consensus       313 ~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-----------------~-~~~spe-~vA~~il~~i~  370 (406)
T PRK07424        313 SPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-----------------I-GVMSAD-WVAKQILKLAK  370 (406)
T ss_pred             chHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-----------------C-CCCCHH-HHHHHHHHHHH
Confidence            5689999999999985 44333  3577778889999887631                 1 124676 99999888887


Q ss_pred             CCCC
Q 023555          253 DSSE  256 (280)
Q Consensus       253 ~~~~  256 (280)
                      ....
T Consensus       371 ~~~~  374 (406)
T PRK07424        371 RDFR  374 (406)
T ss_pred             CCCC
Confidence            6544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=1.8e-24  Score=224.52  Aligned_cols=183  Identities=24%  Similarity=0.227  Sum_probs=153.7

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecCh-------------------------------------------
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRV-------------------------------------------   53 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~-------------------------------------------   53 (280)
                      +++++|||||++|||+++|++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982                                           


Q ss_pred             ----hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHH
Q 023555           54 ----DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM  129 (280)
Q Consensus        54 ----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~  129 (280)
                          .......+.+.+   .+.++.++.+|++ +.++++++++++.+. +++|+||||||+. ..+.+.+.+.++|++.|
T Consensus      2076 ~~~~~ei~~~la~l~~---~G~~v~y~~~DVt-D~~av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~ 2149 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKA---AGASAEYASADVT-NSVSVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVY 2149 (2582)
T ss_pred             cchhHHHHHHHHHHHh---cCCcEEEEEccCC-CHHHHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHH
Confidence                011112222222   2346888999999 789999999999877 6899999999986 44678889999999999


Q ss_pred             HhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc
Q 023555          130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF  209 (280)
Q Consensus       130 ~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v  209 (280)
                      ++|+.|.+.+++++.+.+     .++||++||..+..  +.+++..|+++|++++.|++.++.++.  +++|++|+||++
T Consensus      2150 ~~nv~G~~~Ll~al~~~~-----~~~IV~~SSvag~~--G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~w 2220 (2582)
T TIGR02813      2150 GTKVDGLLSLLAALNAEN-----IKLLALFSSAAGFY--GNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPW 2220 (2582)
T ss_pred             HHHHHHHHHHHHHHHHhC-----CCeEEEEechhhcC--CCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCee
Confidence            999999999998876533     35899999999877  668899999999999999999999874  489999999999


Q ss_pred             cCcccc
Q 023555          210 KSEITE  215 (280)
Q Consensus       210 ~t~~~~  215 (280)
                      +|+|..
T Consensus      2221 dtgm~~ 2226 (2582)
T TIGR02813      2221 DGGMVN 2226 (2582)
T ss_pred             cCCccc
Confidence            998864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=5.6e-23  Score=163.36  Aligned_cols=175  Identities=23%  Similarity=0.311  Sum_probs=143.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHH---HHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL---CDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      |+++||||+++||+++++.|+++|+ .|++++|+.+..+..   .+++++   .+.++.++.+|++ +.++++++++++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~-~~~~~~~~~~~~~   76 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA---LGAEVTVVACDVA-DRAALAAALAAIP   76 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh---cCCeEEEEECCCC-CHHHHHHHHHHHH
Confidence            6799999999999999999999997 588888876544332   233332   2346778899999 7889999999998


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      ..++++|.+||++|.. ...+..+.+.+++++.+++|+.+++.+.+++.    + .+.+++|++||..+..  +.+++..
T Consensus        77 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~-~~~~~ii~~ss~~~~~--~~~~~~~  148 (180)
T smart00822       77 ARLGPLRGVIHAAGVL-DDGLLANLTPERFAAVLAPKVDGAWNLHELTR----D-LPLDFFVLFSSVAGVL--GNPGQAN  148 (180)
T ss_pred             HHcCCeeEEEEccccC-CccccccCCHHHHHHhhchHhHHHHHHHHHhc----c-CCcceEEEEccHHHhc--CCCCchh
Confidence            8899999999999975 33456788899999999999999999999872    2 2358999999988766  5578889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCccc
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK  210 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~  210 (280)
                      |+++|+++..+++.++.    .|+++.++.||+++
T Consensus       149 y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      149 YAAANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             hHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999999999987654    48889999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=1.9e-22  Score=183.57  Aligned_cols=229  Identities=15%  Similarity=0.154  Sum_probs=163.3

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhc----C--CCcceEEEEeccCCCHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQS----G--SSVRAMAVELDVSANGAA   86 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~----~--~~~~~~~~~~D~~~~~~~   86 (280)
                      +....+||++|||||+|+||++++++|+++|++|++++|+.++++.+.+++.+..    +  ...++.++.+|++ +.++
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt-D~es  152 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE-KPDQ  152 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC-CHHH
Confidence            4445689999999999999999999999999999999999988877766554311    1  1135788999999 5565


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      +++       .++++|+||||+|....       ...++...+++|+.+..++++++.+    . +.++||++||.++..
T Consensus       153 I~~-------aLggiDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~----a-gVgRIV~VSSiga~~  213 (576)
T PLN03209        153 IGP-------ALGNASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATV----A-KVNHFILVTSLGTNK  213 (576)
T ss_pred             HHH-------HhcCCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHH----h-CCCEEEEEccchhcc
Confidence            544       34689999999987421       1124677889999999999988743    2 257999999987532


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      . ..+. ..|. +|+++..+.+.+..++...||+++.|+||++.|++...... ..+. ......++++.+.++ |||++
T Consensus       214 ~-g~p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t-~~v~-~~~~d~~~gr~isre-DVA~v  287 (576)
T PLN03209        214 V-GFPA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET-HNLT-LSEEDTLFGGQVSNL-QVAEL  287 (576)
T ss_pred             c-Cccc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccc-ccee-eccccccCCCccCHH-HHHHH
Confidence            1 2222 2244 78888888999999998899999999999998875432111 1111 111125677788888 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCc
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                      ++|++++.... .++++.+-.|
T Consensus       288 VvfLasd~~as-~~kvvevi~~  308 (576)
T PLN03209        288 MACMAKNRRLS-YCKVVEVIAE  308 (576)
T ss_pred             HHHHHcCchhc-cceEEEEEeC
Confidence            99999854322 2445555443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.90  E-value=4e-22  Score=174.32  Aligned_cols=218  Identities=16%  Similarity=0.167  Sum_probs=153.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++|++|||||+|+||+++++.|+++|  ++|++++|+......+.+.+.     ..++.++.+|++ +.+.+.++++  
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Dl~-d~~~l~~~~~--   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP-----APCLRFFIGDVR-DKERLTRALR--   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC-----CCcEEEEEccCC-CHHHHHHHHh--
Confidence            578999999999999999999999987  689999988665444333321     125778899999 6677666654  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                           ++|++||+||....  +..+.+   ..+.+++|+.+++++++++.+     .+.+++|++||.....     +..
T Consensus        74 -----~iD~Vih~Ag~~~~--~~~~~~---~~~~~~~Nv~g~~~ll~aa~~-----~~~~~iV~~SS~~~~~-----p~~  133 (324)
T TIGR03589        74 -----GVDYVVHAAALKQV--PAAEYN---PFECIRTNINGAQNVIDAAID-----NGVKRVVALSTDKAAN-----PIN  133 (324)
T ss_pred             -----cCCEEEECcccCCC--chhhcC---HHHHHHHHHHHHHHHHHHHHH-----cCCCEEEEEeCCCCCC-----CCC
Confidence                 58999999997421  222222   346899999999999999854     2246999999965432     346


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhc--CCCC------CCCCCChHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR--TYPL------RDFGTTDPALTSL  246 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~p~------~~~~~~~~~va~~  246 (280)
                      .|++||++.+.+++.++.++...|+++++++||.+..+... +. ..+.......  ..|+      +.+..++ |++++
T Consensus       134 ~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i-~~~~~~~~~~~~~~~i~~~~~~r~~i~v~-D~a~a  210 (324)
T TIGR03589       134 LYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VV-PFFKSLKEEGVTELPITDPRMTRFWITLE-QGVNF  210 (324)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cH-HHHHHHHHhCCCCeeeCCCCceEeeEEHH-HHHHH
Confidence            79999999999999999888888999999999999876321 11 1111111111  1232      2356677 89998


Q ss_pred             HHHhhcCCCCcccccEEEeCCcc
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      +..++...   ..|+++ +..|.
T Consensus       211 ~~~al~~~---~~~~~~-~~~~~  229 (324)
T TIGR03589       211 VLKSLERM---LGGEIF-VPKIP  229 (324)
T ss_pred             HHHHHhhC---CCCCEE-ccCCC
Confidence            87777532   245655 44443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.89  E-value=5.4e-22  Score=159.65  Aligned_cols=199  Identities=21%  Similarity=0.313  Sum_probs=168.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-----eEEEEecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-----RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-----~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..|+++|||++||||.+++++|.+...     +++++||+-+++++.++.+.+.++ +..++.++..|++ +..++.++.
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~s-Nm~Sv~~A~   80 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVS-NMQSVFRAS   80 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehh-hHHHHHHHH
Confidence            468999999999999999999998754     378999999999999999999887 4567899999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCC-------------C-------------CCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVK-------------S-------------PLDLTEEEWNHIMKTNLTGSWLVSKYVCI  145 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~-------------~-------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  145 (280)
                      .++.++|.++|.+..|||+...++             +             ....+.|++...|+.|++|++.+++.+.|
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            999999999999999999742211             0             11345567788999999999999999999


Q ss_pred             HHHhcCCCCeEEEEeccccccCC-------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc
Q 023555          146 RMRDANQEGSVINISSIAATSRG-------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM  218 (280)
Q Consensus       146 ~~~~~~~~g~vv~vsS~~~~~~~-------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~  218 (280)
                      .+-.+. ...+|.+||..+....       ...+...|+.||.++.-+.-.+-+.+.+-|+.-++++||..-|.+.....
T Consensus       161 ll~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  161 LLCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             HhhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            998754 3499999998775422       12466799999999999999999999999999999999999888876543

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=1.3e-20  Score=164.97  Aligned_cols=229  Identities=18%  Similarity=0.180  Sum_probs=157.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+..+....... ..+...++.++.+|++ +.++++++++     
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~-d~~~~~~~~~-----   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLA-LDGAKERLKLFKADLL-DEGSFELAID-----   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHh-ccCCCCceEEEeCCCC-CchHHHHHHc-----
Confidence            47999999999999999999999999999999888765544322221 1111235778899999 6666766664     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC----C---
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ----L---  170 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~----~---  170 (280)
                        ++|++||+||....     ..+.+++.+.+++|+.+++++++++.+.+    ..++||++||..+.....    .   
T Consensus        77 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~  145 (325)
T PLN02989         77 --GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVS----SVKRVILTSSMAAVLAPETKLGPNDV  145 (325)
T ss_pred             --CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcC----CceEEEEecchhheecCCccCCCCCc
Confidence              58999999986421     22345578899999999999999986643    146999999976543210    0   


Q ss_pred             --------C-----CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--chhhhhhhhhcCCCC--
Q 023555          171 --------P-----GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASRTYPL--  233 (280)
Q Consensus       171 --------~-----~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~p~--  233 (280)
                              |     ....|+.||.+.+.+++.++.++   |+++..++|+.+..+......  ....+........|.  
T Consensus       146 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~  222 (325)
T PLN02989        146 VDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNT  222 (325)
T ss_pred             cCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCC
Confidence                    0     12469999999999999887764   799999999999887643211  112222222222232  


Q ss_pred             --CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          234 --RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       234 --~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                        +++...+ |+|+++..++....  ..| .++++|+ .++
T Consensus       223 ~~r~~i~v~-Dva~a~~~~l~~~~--~~~-~~ni~~~-~~s  258 (325)
T PLN02989        223 THHRFVDVR-DVALAHVKALETPS--ANG-RYIIDGP-VVT  258 (325)
T ss_pred             cCcCeeEHH-HHHHHHHHHhcCcc--cCc-eEEEecC-CCC
Confidence              3456677 99998877765332  134 6788544 443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=3.4e-20  Score=163.84  Aligned_cols=232  Identities=16%  Similarity=0.095  Sum_probs=159.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++||++|||||+|+||+++++.|+++|++|++++|+..........+..    ..++.++.+|++ +.+++.+++++.  
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~-~~~~~~~~~~~~--   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL----AKKIEDHFGDIR-DAAKLRKAIAEF--   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh----cCCceEEEccCC-CHHHHHHHHhhc--
Confidence            5689999999999999999999999999999999987654433332321    124667899999 678888877753  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC---------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR---------  167 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~---------  167 (280)
                         ++|++||+|+....     ..+.+++...+++|+.+++.+++++.+    .+..+++|++||...+..         
T Consensus        75 ---~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~iv~~SS~~vyg~~~~~~~~~e  142 (349)
T TIGR02622        75 ---KPEIVFHLAAQPLV-----RKSYADPLETFETNVMGTVNLLEAIRA----IGSVKAVVNVTSDKCYRNDEWVWGYRE  142 (349)
T ss_pred             ---CCCEEEECCccccc-----ccchhCHHHHHHHhHHHHHHHHHHHHh----cCCCCEEEEEechhhhCCCCCCCCCcc
Confidence               68999999985321     234566778899999999999998732    222469999999643321         


Q ss_pred             -CCCCCCCCChhhHHHHHHHHHHHHHHhCC----CCeEEEEeecCcccCccccC--ccchhhhhhhhhc-CC------CC
Q 023555          168 -GQLPGGVAYASSKAGLNAMTKCLSLELGV----HKIRVNSICPGLFKSEITEG--LMKKDWLNNVASR-TY------PL  233 (280)
Q Consensus       168 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~----~gi~vn~v~pG~v~t~~~~~--~~~~~~~~~~~~~-~~------p~  233 (280)
                       .+..+...|++||.+.+.+++.++.++.+    +|++++++.|+.+..+....  ..-.......... ..      ..
T Consensus       143 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  222 (349)
T TIGR02622       143 TDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDAT  222 (349)
T ss_pred             CCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcc
Confidence             01234578999999999999999988855    48999999999998764210  1111111111111 11      12


Q ss_pred             CCCCCChHHHHHHHHHhhcCC--CCcccccEEEeCCc
Q 023555          234 RDFGTTDPALTSLVRYLVHDS--SEYVSGNIFIVDSG  268 (280)
Q Consensus       234 ~~~~~~~~~va~~~~~l~s~~--~~~i~G~~i~vdgG  268 (280)
                      +.+...+ |+++++..++...  .....|+.+++.+|
T Consensus       223 rd~i~v~-D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       223 RPWQHVL-EPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             cceeeHH-HHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            3455666 8888877665421  11123568888654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.87  E-value=4.1e-20  Score=160.52  Aligned_cols=193  Identities=15%  Similarity=0.106  Sum_probs=142.0

Q ss_pred             CCCcEEEEecCCChhHHH--HHHHHHHhCCeEEEEecChhH------------HHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           17 LDNKVVMVTGASSGLGRE--FCLDLAKAGCRIVAAARRVDR------------LKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a--~a~~l~~~G~~v~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      -.+|++||||+++|||.+  +|++| +.|++|+++++..+.            .+.+.+.+.+.   +.....+.||++ 
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~---G~~a~~i~~DVs-  113 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA---GLYAKSINGDAF-  113 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc---CCceEEEEcCCC-
Confidence            457999999999999999  89999 999999888854322            12233333321   235677899999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCC----------------CC-----------------CCCHHHHHHHH
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKS----------------PL-----------------DLTEEEWNHIM  129 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~----------------~~-----------------~~~~~~~~~~~  129 (280)
                      +.++++++++++.+.+|++|+||||++......|                +.                 ..+.++++..+
T Consensus       114 s~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv  193 (398)
T PRK13656        114 SDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV  193 (398)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH
Confidence            7899999999999999999999999987522110                11                 23445555444


Q ss_pred             Hhhhh---HHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC--CCChhhHHHHHHHHHHHHHHhCCCCeEEEEe
Q 023555          130 KTNLT---GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG--VAYASSKAGLNAMTKCLSLELGVHKIRVNSI  204 (280)
Q Consensus       130 ~~n~~---~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v  204 (280)
                      .+--.   -.|.-.+...+.|.+   ++++|..|...+..  ..|.|  ..-+.+|++|+.-++.|+.++++.|+|+|++
T Consensus       194 ~vMggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~--t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i  268 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPEL--THPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVS  268 (398)
T ss_pred             HhhccchHHHHHHHHHhcccccC---CcEEEEEecCCcce--eecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEE
Confidence            43322   123334555566643   68999999987765  34444  4779999999999999999999999999999


Q ss_pred             ecCcccCccccCccc
Q 023555          205 CPGLFKSEITEGLMK  219 (280)
Q Consensus       205 ~pG~v~t~~~~~~~~  219 (280)
                      .+|++.|.-...++.
T Consensus       269 ~~g~~~T~Ass~Ip~  283 (398)
T PRK13656        269 VLKAVVTQASSAIPV  283 (398)
T ss_pred             ecCcccchhhhcCCC
Confidence            999999987766643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=1.5e-20  Score=150.78  Aligned_cols=173  Identities=25%  Similarity=0.363  Sum_probs=134.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh---hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++|||||.+|||+.+++.|+++|. ++++++|+.   ...++..+++.+.   +.++.+..+|++ +.++++++++++.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~---g~~v~~~~~Dv~-d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA---GARVEYVQCDVT-DPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT---T-EEEEEE--TT-SHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC---CCceeeeccCcc-CHHHHHHHHHHHHh
Confidence            789999999999999999999988 699999993   2345566666653   458999999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .+++++.+||.||.. ...++.+.+.++++..+...+.+.+++.+.+.+     .....+|.+||..+..  +.+++..|
T Consensus        78 ~~~~i~gVih~ag~~-~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-----~~l~~~i~~SSis~~~--G~~gq~~Y  149 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVL-ADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-----RPLDFFILFSSISSLL--GGPGQSAY  149 (181)
T ss_dssp             TSS-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-----TTTSEEEEEEEHHHHT--T-TTBHHH
T ss_pred             ccCCcceeeeeeeee-cccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-----CCCCeEEEECChhHhc--cCcchHhH
Confidence            999999999999986 456788999999999999999999999988733     3367999999999877  66899999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF  209 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v  209 (280)
                      +++.+.++.|++.....    |.++.+|..|..
T Consensus       150 aaAN~~lda~a~~~~~~----g~~~~sI~wg~W  178 (181)
T PF08659_consen  150 AAANAFLDALARQRRSR----GLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHHHHHHT----TSEEEEEEE-EB
T ss_pred             HHHHHHHHHHHHHHHhC----CCCEEEEEcccc
Confidence            99999999999977653    677888887764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.85  E-value=4.9e-20  Score=162.28  Aligned_cols=240  Identities=15%  Similarity=0.137  Sum_probs=155.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH-HHHHHHHh-hcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINK-QSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +.++|++|||||+|+||++++++|+++|++|++++|+..... ...+.+.. ......++.++.+|++ +.+++.++++.
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~   81 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLS-DASSLRRWLDD   81 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCC-CHHHHHHHHHH
Confidence            578999999999999999999999999999999998754211 11111110 0111235788899999 67788777775


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----  168 (280)
                      .     .+|+|||+|+.....     ...++....+++|+.++.++++++.+...+++..-++|++||...+...     
T Consensus        82 ~-----~~d~Vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA-----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             c-----CCCEEEECCcccchh-----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence            4     689999999975321     2234456778999999999999987766432111278889875433211     


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCC---CCeEEEEeecCcccCccccCccchhhhhhhh---------hcCCCC
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGV---HKIRVNSICPGLFKSEITEGLMKKDWLNNVA---------SRTYPL  233 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~---~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~---------~~~~p~  233 (280)
                         +..+...|+.||.+.+.+++.++.++.-   .++.+|.+.|+...+.+...+ . .......         ......
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~g~~~  229 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI-T-RAVGRIKVGLQKKLFLGNLDAS  229 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHH-H-HHHHHHHcCCCCceEeCCCcce
Confidence               1113567999999999999999988742   234445566654332111100 0 0010100         111123


Q ss_pred             CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          234 RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       234 ~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.+...+ |+++++..++...    .+..+++.+|..++.
T Consensus       230 rd~i~v~-D~a~a~~~~~~~~----~~~~yni~~g~~~s~  264 (340)
T PLN02653        230 RDWGFAG-DYVEAMWLMLQQE----KPDDYVVATEESHTV  264 (340)
T ss_pred             ecceeHH-HHHHHHHHHHhcC----CCCcEEecCCCceeH
Confidence            4567788 9999998887532    145688888766543

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=2.8e-19  Score=141.29  Aligned_cols=143  Identities=22%  Similarity=0.298  Sum_probs=116.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.++...+++...   +.+..++.+|++ +.++++++++++
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~v~~~v~~~   87 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL---GGEALFVSYDME-KQGDWQRVISIT   87 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988877777777532   235667899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCCeEEEEecccc
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN------QEGSVINISSIAA  164 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~g~vv~vsS~~~  164 (280)
                      .+.+|++|++|||||......++.+.+.++ ++  .+|+.+.+..++.+.++|.+++      ..||+..||+...
T Consensus        88 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         88 LNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            999999999999999875445555555555 44  7778888889999999987743      2578888877554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=2e-18  Score=150.84  Aligned_cols=226  Identities=18%  Similarity=0.162  Sum_probs=151.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+||+++||||+|+||++++++|+++|++|+++.|+.+..+...... ...+...++.++.+|++ +.+.++++++    
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~-~~~~~~~~~~----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLL-ALDGAKERLKLFKADLL-EESSFEQAIE----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHH-hccCCCCceEEEecCCC-CcchHHHHHh----
Confidence            56899999999999999999999999999999998876544332222 11111235778899999 5666666665    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc-CC-CC----
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS-RG-QL----  170 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~-~~-~~----  170 (280)
                         .+|++||+|+.... . .    .+...+.+++|+.++.++++++..    ..+-++||++||..... .. +.    
T Consensus        77 ---~~d~vih~A~~~~~-~-~----~~~~~~~~~~nv~gt~~ll~~~~~----~~~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 ---GCDAVFHTASPVFF-T-V----KDPQTELIDPALKGTINVLNTCKE----TPSVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             ---CCCEEEEeCCCcCC-C-C----CCchhhhhHHHHHHHHHHHHHHHh----cCCccEEEEecchhheecCCccCCCCC
Confidence               58999999986421 1 1    122346789999999999988732    12246999999976431 10 00    


Q ss_pred             ---------C-----CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--chhhhhhhhhcCC---
Q 023555          171 ---------P-----GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASRTY---  231 (280)
Q Consensus       171 ---------~-----~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~---  231 (280)
                               |     ....|+.||.+.+.+++.+..++   |+++++++|+.+.++......  .......+.....   
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~  220 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFN  220 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCC
Confidence                     0     13569999999999998887764   799999999999888643211  1111112111111   


Q ss_pred             -CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          232 -PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       232 -p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                       ....+..++ |+|+++..++....  ..| .++++|+
T Consensus       221 ~~~~~~v~v~-Dva~a~~~al~~~~--~~~-~yni~~~  254 (322)
T PLN02986        221 NRFYRFVDVR-DVALAHIKALETPS--ANG-RYIIDGP  254 (322)
T ss_pred             CcCcceeEHH-HHHHHHHHHhcCcc--cCC-cEEEecC
Confidence             123466777 99998887775432  234 6777543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.81  E-value=1.3e-17  Score=151.43  Aligned_cols=181  Identities=14%  Similarity=0.084  Sum_probs=130.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh---H----H---------HHHHHHHHhhcCCCcceEEEEec
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---R----L---------KSLCDEINKQSGSSVRAMAVELD   79 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~---~----~---------~~~~~~~~~~~~~~~~~~~~~~D   79 (280)
                      .+++|++|||||+|+||++++++|+++|++|+++++...   .    .         .+..+.+.+..  ..++.++.+|
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~~v~~D  121 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS--GKEIELYVGD  121 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhh--CCcceEEECC
Confidence            578899999999999999999999999999999874311   0    0         00011111111  1247788999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 023555           80 VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI  159 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~v  159 (280)
                      ++ +.+.++++++..     ++|+|||+|+...  .+....+.++++..+++|+.+++++++++..    .+...++|++
T Consensus       122 l~-d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv~~~~V~~  189 (442)
T PLN02572        122 IC-DFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAPDCHLVKL  189 (442)
T ss_pred             CC-CHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCCCccEEEE
Confidence            99 677777777753     7999999997632  2333445566778899999999999998733    1212489999


Q ss_pred             eccccccCC----------------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          160 SSIAATSRG----------------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       160 sS~~~~~~~----------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                      ||...+...                      +..+...|+.||.+.+.+++.++..+   |+.+..++|+.+..+.
T Consensus       190 SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        190 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVR  262 (442)
T ss_pred             ecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecccccCCC
Confidence            997644211                      11123579999999999998887764   8999999999987765

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.80  E-value=4.1e-18  Score=150.89  Aligned_cols=233  Identities=12%  Similarity=0.098  Sum_probs=153.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEE-EEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |++|||||+|+||+++++.|.++|+.++ ++++..... .. ..+... ....++.++.+|++ +.++++++++.     
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~Dl~-d~~~~~~~~~~-----   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAG-NL-MSLAPV-AQSERFAFEKVDIC-DRAELARVFTE-----   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcccc-ch-hhhhhc-ccCCceEEEECCCc-ChHHHHHHHhh-----
Confidence            5899999999999999999999999754 555543211 11 111110 01125677899999 67777777764     


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh---c-CCCCeEEEEeccccccC-------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRD---A-NQEGSVINISSIAATSR-------  167 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~-~~~g~vv~vsS~~~~~~-------  167 (280)
                      .++|+|||+||....     ..+.++++..+++|+.+++.+++++.+.|..   . .+..++|++||...+..       
T Consensus        73 ~~~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  147 (355)
T PRK10217         73 HQPDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF  147 (355)
T ss_pred             cCCCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCC
Confidence            269999999987522     2344667889999999999999999775421   1 11358999999543221       


Q ss_pred             ----CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC-ccchhhhhhhhhc-CCC-------CC
Q 023555          168 ----GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG-LMKKDWLNNVASR-TYP-------LR  234 (280)
Q Consensus       168 ----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~-~~~~~~~~~~~~~-~~p-------~~  234 (280)
                          .+..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..+-... ..-..+....... ..+       ..
T Consensus       148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  224 (355)
T PRK10217        148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIR  224 (355)
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeee
Confidence                022345689999999999999998876   6778888888776654311 0001111211211 112       23


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      .+...+ |++.++..++...   ..|+.+++.+|..++.
T Consensus       225 ~~i~v~-D~a~a~~~~~~~~---~~~~~yni~~~~~~s~  259 (355)
T PRK10217        225 DWLYVE-DHARALYCVATTG---KVGETYNIGGHNERKN  259 (355)
T ss_pred             CcCcHH-HHHHHHHHHHhcC---CCCCeEEeCCCCcccH
Confidence            467777 8999887776532   3578899988876543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.80  E-value=2.7e-17  Score=145.60  Aligned_cols=216  Identities=16%  Similarity=0.134  Sum_probs=146.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -+++++|||||+|+||++++++|+++|++|++++|+.+..+.+...+..    ..++.++.+|++ +.+.++++++    
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~-~~~~~~~~~~----   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE----GDRLRLFRADLQ-EEGSFDEAVK----   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc----CCeEEEEECCCC-CHHHHHHHHc----
Confidence            4577999999999999999999999999999999987666555444321    235778899999 6666666553    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHH--HHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC-----
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEW--NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ-----  169 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~-----  169 (280)
                         .+|+|||+|+...........+.+.+  ...++.|+.+++.+++++.+.    ...+++|++||...+...+     
T Consensus        79 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~  151 (353)
T PLN02896         79 ---GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS----KTVKRVVFTSSISTLTAKDSNGRW  151 (353)
T ss_pred             ---CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc----CCccEEEEEechhhccccccCCCC
Confidence               58999999987533211122233333  456778889999999987542    1246999999976543110     


Q ss_pred             ---------C---------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---hhhhhhhh
Q 023555          170 ---------L---------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNVAS  228 (280)
Q Consensus       170 ---------~---------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---~~~~~~~~  228 (280)
                               .         +....|+.||.+.+.+++.++.++   |+++.+++|+.+..+......+.   ........
T Consensus       152 ~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g  228 (353)
T PLN02896        152 RAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITG  228 (353)
T ss_pred             CCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcC
Confidence                     0         112379999999999999888765   79999999988888754321111   01100001


Q ss_pred             cC--CC----------CCCCCCChHHHHHHHHHhhc
Q 023555          229 RT--YP----------LRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       229 ~~--~p----------~~~~~~~~~~va~~~~~l~s  252 (280)
                      ..  .+          .+.+...+ |+++++..++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~dfi~v~-Dva~a~~~~l~  263 (353)
T PLN02896        229 DSKLFSILSAVNSRMGSIALVHIE-DICDAHIFLME  263 (353)
T ss_pred             CccccccccccccccCceeEEeHH-HHHHHHHHHHh
Confidence            00  11          12456777 99998888775

>PLN02650 dihydroflavonol-4-reductase

Probab=99.80  E-value=9.8e-18  Score=148.29  Aligned_cols=213  Identities=17%  Similarity=0.192  Sum_probs=146.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .+|++|||||+|+||++++++|+++|++|++++|+............ ..+...++.++.+|++ +.+.++++++     
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~v~~Dl~-d~~~~~~~~~-----   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLD-LPGATTRLTLWKADLA-VEGSFDDAIR-----   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHh-ccCCCCceEEEEecCC-ChhhHHHHHh-----
Confidence            46799999999999999999999999999999998765554332221 1111125778899999 5666666654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----C-CC-
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----Q-LP-  171 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----~-~~-  171 (280)
                        .+|++||+|+....    ..  .+.....+++|+.+++++++++.+.    +..+++|++||.......    + .. 
T Consensus        77 --~~d~ViH~A~~~~~----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~----~~~~r~v~~SS~~~~~~~~~~~~~~~E  144 (351)
T PLN02650         77 --GCTGVFHVATPMDF----ES--KDPENEVIKPTVNGMLSIMKACAKA----KTVRRIVFTSSAGTVNVEEHQKPVYDE  144 (351)
T ss_pred             --CCCEEEEeCCCCCC----CC--CCchhhhhhHHHHHHHHHHHHHHhc----CCceEEEEecchhhcccCCCCCCccCc
Confidence              58999999986421    11  1223567899999999999988542    113589999997543210    0 00 


Q ss_pred             --------------CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhh---hhhc-----
Q 023555          172 --------------GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN---VASR-----  229 (280)
Q Consensus       172 --------------~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~---~~~~-----  229 (280)
                                    ....|+.||.+.+.+++.++.++   |++++.++|+.+..+.............   ....     
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  221 (351)
T PLN02650        145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYS  221 (351)
T ss_pred             ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccC
Confidence                          11379999999999999988774   8999999999998886432211111111   0011     


Q ss_pred             CCCCCCCCCChHHHHHHHHHhhcC
Q 023555          230 TYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       230 ~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ....+.+...+ |+++++.+++..
T Consensus       222 ~~~~r~~v~V~-Dva~a~~~~l~~  244 (351)
T PLN02650        222 IIKQGQFVHLD-DLCNAHIFLFEH  244 (351)
T ss_pred             cCCCcceeeHH-HHHHHHHHHhcC
Confidence            01235678888 999999888864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.79  E-value=1.7e-17  Score=143.39  Aligned_cols=208  Identities=15%  Similarity=0.092  Sum_probs=140.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +-++|++|||||+|+||++++++|+++|++|+++.|+..  +.......+..   ...++.++.+|++ +.+++.+++. 
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~-d~~~~~~~l~-   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC---EEERLKVFDVDPL-DYHSILDALK-   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc---CCCceEEEEecCC-CHHHHHHHHc-
Confidence            445789999999999999999999999999999998632  22222233221   1225777889999 5666654443 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ----  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~----  169 (280)
                            .+|.++|.++...      +.. +++++.+++|+.+++++++++.+.+    ..++||++||..+....+    
T Consensus        78 ------~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~----~v~riV~~SS~~a~~~~~~~~~  140 (297)
T PLN02583         78 ------GCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTD----TIEKVVFTSSLTAVIWRDDNIS  140 (297)
T ss_pred             ------CCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEecchHheecccccCC
Confidence                  6889998765421      111 2457899999999999999986543    146999999976542110    


Q ss_pred             ----CC--CC----------CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCC-
Q 023555          170 ----LP--GG----------VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYP-  232 (280)
Q Consensus       170 ----~~--~~----------~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p-  232 (280)
                          ..  .+          ..|+.||...+.+++.++.+   +|+++++|+|+.+..+......  ..+.... ...+ 
T Consensus       141 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~--~~~~~~~-~~~~~  214 (297)
T PLN02583        141 TQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHN--PYLKGAA-QMYEN  214 (297)
T ss_pred             CCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCch--hhhcCCc-ccCcc
Confidence                00  01          15999999999998887765   3899999999999887543211  1111100 0011 


Q ss_pred             -CCCCCCChHHHHHHHHHhhc
Q 023555          233 -LRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       233 -~~~~~~~~~~va~~~~~l~s  252 (280)
                       ...+...+ |+|+++...+.
T Consensus       215 ~~~~~v~V~-Dva~a~~~al~  234 (297)
T PLN02583        215 GVLVTVDVN-FLVDAHIRAFE  234 (297)
T ss_pred             cCcceEEHH-HHHHHHHHHhc
Confidence             12356677 99998877775

>PLN02240 UDP-glucose 4-epimerase

Probab=99.79  E-value=1e-17  Score=148.06  Aligned_cols=240  Identities=15%  Similarity=0.154  Sum_probs=151.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .|++|+++||||+|+||+++++.|+++|++|++++|...........+..... ...++.++.+|++ +.+++.++++..
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~l~~~~~~~   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLR-DKEALEKVFAST   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcC-CHHHHHHHHHhC
Confidence            57899999999999999999999999999999998754322211111211110 1225677899999 677777776642


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           .+|++||+|+....     ..+.+++.+.+++|+.++.++++++    .+. +.+++|++||...+...      
T Consensus        81 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss~~vyg~~~~~~~~  145 (352)
T PLN02240         81 -----RFDAVIHFAGLKAV-----GESVAKPLLYYDNNLVGTINLLEVM----AKH-GCKKLVFSSSATVYGQPEEVPCT  145 (352)
T ss_pred             -----CCCEEEEccccCCc-----cccccCHHHHHHHHHHHHHHHHHHH----HHc-CCCEEEEEccHHHhCCCCCCCCC
Confidence                 79999999987421     1133456778999999999998865    222 24689999996433210      


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc--------cCccc--hhhhhhhhhcCC----
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT--------EGLMK--KDWLNNVASRTY----  231 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~--------~~~~~--~~~~~~~~~~~~----  231 (280)
                         +..+...|+.+|.+.+.+++.++.+.  .++++..+.++.+..+..        .....  ..+.........    
T Consensus       146 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (352)
T PLN02240        146 EEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELT  223 (352)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceE
Confidence               11235689999999999999887652  356777777644332110        00000  011221111111    


Q ss_pred             ------------CCCCCCCChHHHHHHHHHhhcCC--CCcccccEEEeCCcccCCCC
Q 023555          232 ------------PLRDFGTTDPALTSLVRYLVHDS--SEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       232 ------------p~~~~~~~~~~va~~~~~l~s~~--~~~i~G~~i~vdgG~~~~~~  274 (280)
                                  ..+.+...+ |+++++..++...  .....|+.+++.+|..++..
T Consensus       224 ~~g~~~~~~~g~~~~~~i~v~-D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~  279 (352)
T PLN02240        224 VFGNDYPTKDGTGVRDYIHVM-DLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVL  279 (352)
T ss_pred             EeCCCCCCCCCCEEEeeEEHH-HHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHH
Confidence                        112345566 8998876665321  12245688999888776543

>PLN02214 cinnamoyl-CoA reductase

Probab=99.79  E-value=3.7e-17  Score=144.08  Aligned_cols=219  Identities=16%  Similarity=0.146  Sum_probs=146.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH-HHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS-LCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+.... ....+..   ...++.++.+|++ +.+++.++++  
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~-d~~~~~~~~~--   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG---GKERLILCKADLQ-DYEALKAAID--   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC---CCCcEEEEecCcC-ChHHHHHHHh--
Confidence            3578999999999999999999999999999999998654322 1222221   1125777899999 6666666654  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--CCC-
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--QLP-  171 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--~~~-  171 (280)
                           ++|+|||+|+...          ++..+.+++|+.++.++++++.+    . +.+++|++||..+....  ..+ 
T Consensus        81 -----~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~----~-~v~r~V~~SS~~avyg~~~~~~~  140 (342)
T PLN02214         81 -----GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAE----A-KVKRVVITSSIGAVYMDPNRDPE  140 (342)
T ss_pred             -----cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHh----c-CCCEEEEeccceeeeccCCCCCC
Confidence                 6899999998641          12467799999999999998743    2 24699999996533211  000 


Q ss_pred             ----------------CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---hhhhhhhhhcCC-
Q 023555          172 ----------------GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASRTY-  231 (280)
Q Consensus       172 ----------------~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~-  231 (280)
                                      ....|+.||.+.+.+++.++.++   |+++..++|+.+..+.......   ............ 
T Consensus       141 ~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~  217 (342)
T PLN02214        141 AVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKT  217 (342)
T ss_pred             cccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc
Confidence                            12469999999999999887764   7999999999998875332111   011110111101 


Q ss_pred             ---CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          232 ---PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       232 ---p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                         ..+.+...+ |+|.++..++...  ...| .+++.+
T Consensus       218 ~~~~~~~~i~V~-Dva~a~~~al~~~--~~~g-~yn~~~  252 (342)
T PLN02214        218 YANLTQAYVDVR-DVALAHVLVYEAP--SASG-RYLLAE  252 (342)
T ss_pred             CCCCCcCeeEHH-HHHHHHHHHHhCc--ccCC-cEEEec
Confidence               112456677 9999888777532  1234 455543

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=4.9e-17  Score=142.01  Aligned_cols=213  Identities=17%  Similarity=0.164  Sum_probs=142.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|++|||||+|+||++++++|+++|++|++++|+........ .+....+...++.++.+|++ +.+.+.++++     
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~-----   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLL-EEGSFDSVVD-----   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEecccc-CcchHHHHHc-----
Confidence            5789999999999999999999999999999998765433221 12111111236778999999 5566665554     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc--ccCCCC-----
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA--TSRGQL-----  170 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~--~~~~~~-----  170 (280)
                        ++|++||+|+....  ..  .  +.....+++|+.++.++++++..    ..+..++|++||.++  +...+.     
T Consensus        76 --~~d~Vih~A~~~~~--~~--~--~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~~v~~SS~~~~~y~~~~~~~~~~  143 (322)
T PLN02662         76 --GCEGVFHTASPFYH--DV--T--DPQAELIDPAVKGTLNVLRSCAK----VPSVKRVVVTSSMAAVAYNGKPLTPDVV  143 (322)
T ss_pred             --CCCEEEEeCCcccC--CC--C--ChHHHHHHHHHHHHHHHHHHHHh----CCCCCEEEEccCHHHhcCCCcCCCCCCc
Confidence              68999999986421  11  1  11246889999999999998743    212469999999653  211010     


Q ss_pred             --------CC-----CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--chhhhhhhhhc--CCC-
Q 023555          171 --------PG-----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASR--TYP-  232 (280)
Q Consensus       171 --------~~-----~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~~~~~~~~~~--~~p-  232 (280)
                              |.     ...|+.+|.+.+.+++.++.++   ++++..++|+.+.++......  ...........  ..| 
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  220 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPN  220 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCC
Confidence                    10     1479999999999888877654   799999999999887643211  11111111111  112 


Q ss_pred             -CCCCCCChHHHHHHHHHhhcC
Q 023555          233 -LRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       233 -~~~~~~~~~~va~~~~~l~s~  253 (280)
                       ...+...+ |+++++..++..
T Consensus       221 ~~~~~i~v~-Dva~a~~~~~~~  241 (322)
T PLN02662        221 ASYRWVDVR-DVANAHIQAFEI  241 (322)
T ss_pred             CCcCeEEHH-HHHHHHHHHhcC
Confidence             23467777 999988877754

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.77  E-value=8.3e-17  Score=142.20  Aligned_cols=237  Identities=11%  Similarity=0.061  Sum_probs=154.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC--CCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG--SSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++|++|||||+|.||++++++|.++|++|++++|................+  ...++.++.+|+. +.+.+.++++
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~l~~~~~   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIR-KFTDCQKACK   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCC-CHHHHHHHhh
Confidence            467889999999999999999999999999999999864332221111111111  0125678899999 6666555554


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---  169 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---  169 (280)
                             .+|+|||.|+......     ..++....+++|+.++.++++++.    + .+-.++|++||...+....   
T Consensus        90 -------~~d~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~----~-~~~~~~v~~SS~~vyg~~~~~~  152 (348)
T PRK15181         90 -------NVDYVLHQAALGSVPR-----SLKDPIATNSANIDGFLNMLTAAR----D-AHVSSFTYAASSSTYGDHPDLP  152 (348)
T ss_pred             -------CCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHH----H-cCCCeEEEeechHhhCCCCCCC
Confidence                   5899999998643211     123334578999999999998872    2 2245999999865443111   


Q ss_pred             ------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhh-cCCC-----
Q 023555          170 ------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVAS-RTYP-----  232 (280)
Q Consensus       170 ------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~-~~~p-----  232 (280)
                            ..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..+.....     .-..+...... ...+     
T Consensus       153 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g  229 (348)
T PRK15181        153 KIEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDG  229 (348)
T ss_pred             CCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCC
Confidence                  1134579999999999998877664   79999999998877643211     00112222221 1111     


Q ss_pred             --CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          233 --LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       233 --~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                        .+.+...+ |+++++..++........|+++++-+|..++.
T Consensus       230 ~~~rd~i~v~-D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~  271 (348)
T PRK15181        230 STSRDFCYIE-NVIQANLLSATTNDLASKNKVYNVAVGDRTSL  271 (348)
T ss_pred             CceEeeEEHH-HHHHHHHHHHhcccccCCCCEEEecCCCcEeH
Confidence              13455577 89998776553222224578899988766543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.77  E-value=1.9e-17  Score=146.03  Aligned_cols=232  Identities=13%  Similarity=0.127  Sum_probs=145.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-----HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++...+.....  ....+.++.+|++ +.+++.++++..
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~-d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNV--NKARMKLHYGDLT-DSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccc--cccceeEEEeccC-CHHHHHHHHHhC
Confidence            689999999999999999999999999999987542     22111111000  0124778899999 677777777753


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           ++|+|||+|+.....     ...+.-...+++|+.++.++++++.+.-.+  +..++|++||...+...      
T Consensus        78 -----~~d~ViH~Aa~~~~~-----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~  145 (343)
T TIGR01472        78 -----KPTEIYNLAAQSHVK-----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQASTSELYGKVQEIPQN  145 (343)
T ss_pred             -----CCCEEEECCcccccc-----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEeccHHhhCCCCCCCCC
Confidence                 689999999975321     122223567789999999999988552111  12489999996443211      


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCCC---CeEEEEeecCcccCccccCccchhhhhhhh---------hcCCCC
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGVH---KIRVNSICPGLFKSEITEGLMKKDWLNNVA---------SRTYPL  233 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~---gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~---------~~~~p~  233 (280)
                         +..+...|+.||.+.+.+++.++.++.-.   ++.+|...|+.-...+...+  ........         ......
T Consensus       146 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~g~~~  223 (343)
T TIGR01472       146 ETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKI--TRAAAKIKLGLQEKLYLGNLDAK  223 (343)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHH--HHHHHHHHcCCCCceeeCCCccc
Confidence               11245689999999999999998876322   22334444542211111100  01111111         111223


Q ss_pred             CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          234 RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       234 ~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ..+...+ |+++++..++....    +..+++-+|..++.
T Consensus       224 rd~i~V~-D~a~a~~~~~~~~~----~~~yni~~g~~~s~  258 (343)
T TIGR01472       224 RDWGHAK-DYVEAMWLMLQQDK----PDDYVIATGETHSV  258 (343)
T ss_pred             cCceeHH-HHHHHHHHHHhcCC----CccEEecCCCceeH
Confidence            4567788 99998877765321    24688877766543

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.77  E-value=1.6e-16  Score=135.11  Aligned_cols=228  Identities=18%  Similarity=0.160  Sum_probs=159.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .+++|+||||+|.||+++++.|+++||.|..+-|++++.+.. +.+.+..+...+...+..|++ +.++.+++++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a~~~l~l~~aDL~-d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGAKERLKLFKADLL-DEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccCcccceEEecccc-ccchHHHHHh-----
Confidence            789999999999999999999999999999999998874432 223333344557889999999 6788888877     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-CCC-----
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-QLP-----  171 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-~~~-----  171 (280)
                        ++|+|+|.|......    ..+  .-.+.++..+.|+.++++++..    .+.-.|||++||.++.... +..     
T Consensus        78 --gcdgVfH~Asp~~~~----~~~--~e~~li~pav~Gt~nVL~ac~~----~~sVkrvV~TSS~aAv~~~~~~~~~~~v  145 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFD----LED--PEKELIDPAVKGTKNVLEACKK----TKSVKRVVYTSSTAAVRYNGPNIGENSV  145 (327)
T ss_pred             --CCCEEEEeCccCCCC----CCC--cHHhhhhHHHHHHHHHHHHHhc----cCCcceEEEeccHHHhccCCcCCCCCcc
Confidence              799999999876321    111  2246899999999999999833    2224699999998876522 100     


Q ss_pred             ----CC----------CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch--hhhhhhhh---cCCC
Q 023555          172 ----GG----------VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK--DWLNNVAS---RTYP  232 (280)
Q Consensus       172 ----~~----------~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~--~~~~~~~~---~~~p  232 (280)
                          .|          ..|+.||.-.+..+..+|.+   +|+....|.|+.|-.|........  ......+.   ...+
T Consensus       146 vdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~  222 (327)
T KOG1502|consen  146 VDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP  222 (327)
T ss_pred             cccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC
Confidence                01          26888887777766666666   479999999999988876653221  11111111   1122


Q ss_pred             CC--CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          233 LR--DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       233 ~~--~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ..  .+...+ |+|.+..++.....  -.|++|.+....+
T Consensus       223 n~~~~~VdVr-DVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  223 NFWLAFVDVR-DVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             CCceeeEeHH-HHHHHHHHHHcCcc--cCceEEEecCccc
Confidence            22  245666 89998888875443  3488888877665

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.77  E-value=8.2e-17  Score=144.14  Aligned_cols=229  Identities=19%  Similarity=0.199  Sum_probs=173.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..++||++|||||+|.||+++++++++.+. ++++.+|++.+......++++..+ ..+..++-+|+. |.+.++++++.
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVr-D~~~~~~~~~~  323 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVR-DRDRVERAMEG  323 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccc-cHHHHHHHHhc
Confidence            368999999999999999999999999988 489999999999999999988766 568889999999 77777777775


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      .     ++|+++|.|+.-+.  |..+.   ...+-+.+|+.|+.++++++..     .+-.++|.+|+--+..     +-
T Consensus       324 ~-----kvd~VfHAAA~KHV--Pl~E~---nP~Eai~tNV~GT~nv~~aa~~-----~~V~~~V~iSTDKAV~-----Pt  383 (588)
T COG1086         324 H-----KVDIVFHAAALKHV--PLVEY---NPEEAIKTNVLGTENVAEAAIK-----NGVKKFVLISTDKAVN-----PT  383 (588)
T ss_pred             C-----CCceEEEhhhhccC--cchhc---CHHHHHHHhhHhHHHHHHHHHH-----hCCCEEEEEecCcccC-----Cc
Confidence            3     79999999987533  33333   3456789999999999999843     3356999999866543     33


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC--------CCCCCChHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL--------RDFGTTDPALTS  245 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~va~  245 (280)
                      ..|++||...+.++++++......+.++.+|+=|-|-.....-+   +.+.+..++.-|+        +.+.+-+ |+++
T Consensus       384 NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi---PlFk~QI~~GgplTvTdp~mtRyfMTI~-EAv~  459 (588)
T COG1086         384 NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI---PLFKKQIAEGGPLTVTDPDMTRFFMTIP-EAVQ  459 (588)
T ss_pred             hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCH---HHHHHHHHcCCCccccCCCceeEEEEHH-HHHH
Confidence            58999999999999999998776678999998887754332221   2222222222222        2345555 7777


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++..-..   -.-.|+++.+|-|-.++
T Consensus       460 LVlqA~a---~~~gGeifvldMGepvk  483 (588)
T COG1086         460 LVLQAGA---IAKGGEIFVLDMGEPVK  483 (588)
T ss_pred             HHHHHHh---hcCCCcEEEEcCCCCeE
Confidence            7665543   35689999999987654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.77  E-value=6.1e-17  Score=142.49  Aligned_cols=214  Identities=16%  Similarity=0.135  Sum_probs=143.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||+|+||++++++|+++|++|+++.|+......... +... ....++.++.+|++ +.+.+.++++   
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~-d~~~~~~~~~---   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRAL-QELGDLKIFGADLT-DEESFEAPIA---   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhc-CCCCceEEEEcCCC-ChHHHHHHHh---
Confidence            5668999999999999999999999999999988887654332221 1110 11114678899999 5666665554   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                          ++|++||+|+...    ..  ..+.....+++|+.++.++++++.+.    .+.+++|++||...+...       
T Consensus        80 ----~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~----~~~~~~v~~SS~~~~g~~~~~~~~~  145 (338)
T PLN00198         80 ----GCDLVFHVATPVN----FA--SEDPENDMIKPAIQGVHNVLKACAKA----KSVKRVILTSSAAAVSINKLSGTGL  145 (338)
T ss_pred             ----cCCEEEEeCCCCc----cC--CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeecceeeeccCCCCCCc
Confidence                6899999998531    11  12234567899999999999987442    224699999997654311       


Q ss_pred             ---------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch--hhhhhhhh-cC
Q 023555          169 ---------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK--DWLNNVAS-RT  230 (280)
Q Consensus       169 ---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~--~~~~~~~~-~~  230 (280)
                                     ..+....|+.||.+.+.+++.++.++   |+++..++|+.+..+......+.  ........ +.
T Consensus       146 ~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PLN00198        146 VMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNE  222 (338)
T ss_pred             eeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCc
Confidence                           01234569999999999999988764   79999999999988753211110  00000010 00


Q ss_pred             --------CC----CCCCCCChHHHHHHHHHhhcC
Q 023555          231 --------YP----LRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       231 --------~p----~~~~~~~~~~va~~~~~l~s~  253 (280)
                              .+    ...+...+ |+++++..++..
T Consensus       223 ~~~~g~~~~~~~~~~~~~i~V~-D~a~a~~~~~~~  256 (338)
T PLN00198        223 FLINGLKGMQMLSGSISITHVE-DVCRAHIFLAEK  256 (338)
T ss_pred             cccccccccccccCCcceeEHH-HHHHHHHHHhhC
Confidence                    11    13567787 999988887754

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.75  E-value=2.7e-16  Score=136.64  Aligned_cols=226  Identities=14%  Similarity=0.132  Sum_probs=149.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +++||||+|+||++++++|+++|  ++|++++|.... ..+..+.+..    ..++.++.+|++ +.+++.++++..   
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~-~~~~~~~~~~~~---   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED----NPRYRFVKGDIG-DRELVSRLFTEH---   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc----CCCcEEEEcCCc-CHHHHHHHHhhc---
Confidence            48999999999999999999988  688888764211 1111112211    124667899999 677777777642   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------  168 (280)
                        ++|+|||+|+....     +.+.+..+..+++|+.++..+++++.+.+    ...++|++||...+...         
T Consensus        73 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~v~g~~~~~~~~~e~  141 (317)
T TIGR01181        73 --QPDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYW----HEFRFHHISTDEVYGDLEKGDAFTET  141 (317)
T ss_pred             --CCCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcC----CCceEEEeeccceeCCCCCCCCcCCC
Confidence              69999999987521     22345567789999999999998774432    13489999985432210         


Q ss_pred             -CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhcC-CCC-------CCCCC
Q 023555          169 -QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASRT-YPL-------RDFGT  238 (280)
Q Consensus       169 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~p~-------~~~~~  238 (280)
                       +......|+.+|.+.+.+++.++.++   ++++..++|+.+..+..... ............. .++       ..+..
T Consensus       142 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (317)
T TIGR01181       142 TPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLY  218 (317)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEE
Confidence             11234579999999999999988775   78999999998876643211 1111222222211 121       12444


Q ss_pred             ChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       239 ~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+ |+++++..++...   ..|+++++-++..++
T Consensus       219 v~-D~a~~~~~~~~~~---~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       219 VE-DHCRAIYLVLEKG---RVGETYNIGGGNERT  248 (317)
T ss_pred             HH-HHHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence            66 8999988887532   356788887776544

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.75  E-value=1.9e-16  Score=140.82  Aligned_cols=216  Identities=13%  Similarity=0.077  Sum_probs=141.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC---CCcceEEEEeccCCCHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG---SSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ..+.++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+ +++.....   ....+.++.+|++ +.+++.++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~-d~~~l~~~  125 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLT-EPESLHEA  125 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCC-CHHHHHHH
Confidence            4568899999999999999999999999999999988887655543 22221100   0124677899999 66777766


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc--cc--
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA--TS--  166 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~--~~--  166 (280)
                      ++       .+|.++|.++...+... ..    ......++|+.++.++++++..    ..+-.++|++||..+  +.  
T Consensus       126 i~-------~~d~V~hlA~~~~~~~~-~~----~~~~~~~~nv~gt~~llea~~~----~~~v~r~V~~SS~~~~vyg~~  189 (367)
T PLN02686        126 FD-------GCAGVFHTSAFVDPAGL-SG----YTKSMAELEAKASENVIEACVR----TESVRKCVFTSSLLACVWRQN  189 (367)
T ss_pred             HH-------hccEEEecCeeeccccc-cc----ccchhhhhhHHHHHHHHHHHHh----cCCccEEEEeccHHHhccccc
Confidence            65       47899999987532211 01    1123467789999988888632    112458999999531  10  


Q ss_pred             -CCC----------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhc
Q 023555          167 -RGQ----------------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR  229 (280)
Q Consensus       167 -~~~----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~  229 (280)
                       ...                ......|+.||.+.+.+++.++.+   +|+++++++|+.+.++........... .....
T Consensus       190 ~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g  265 (367)
T PLN02686        190 YPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATI-AYLKG  265 (367)
T ss_pred             CCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHH-HHhcC
Confidence             000                012246999999999999988776   489999999999998853221111111 11111


Q ss_pred             CCCC---C--CCCCChHHHHHHHHHhhc
Q 023555          230 TYPL---R--DFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       230 ~~p~---~--~~~~~~~~va~~~~~l~s  252 (280)
                      ..++   +  .+...+ |+++++..++.
T Consensus       266 ~~~~~g~g~~~~v~V~-Dva~A~~~al~  292 (367)
T PLN02686        266 AQEMLADGLLATADVE-RLAEAHVCVYE  292 (367)
T ss_pred             CCccCCCCCcCeEEHH-HHHHHHHHHHh
Confidence            1111   1  255667 89998877765

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.75  E-value=4.1e-16  Score=137.12  Aligned_cols=233  Identities=19%  Similarity=0.199  Sum_probs=146.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|+||+++++.|+++|++|++++|...........+.+..  ..++.++.+|++ +.+.+.++++.     .+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~-d~~~~~~~~~~-----~~   73 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIR-NEALLTEILHD-----HA   73 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCC-CHHHHHHHHhc-----CC
Confidence            69999999999999999999999999998865333222222222211  124667889999 66766666653     37


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC-
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL-  170 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~-  170 (280)
                      +|+|||+|+......     ..+.....+++|+.++..+++++    ++. +.+++|++||...+...         +. 
T Consensus        74 ~d~vvh~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~  143 (338)
T PRK10675         74 IDTVIHFAGLKAVGE-----SVQKPLEYYDNNVNGTLRLISAM----RAA-NVKNLIFSSSATVYGDQPKIPYVESFPTG  143 (338)
T ss_pred             CCEEEECCccccccc-----hhhCHHHHHHHHHHHHHHHHHHH----HHc-CCCEEEEeccHHhhCCCCCCccccccCCC
Confidence            999999998752211     12334567899999999988865    332 24689999996543211         00 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-------ch---hhhhhhhhc-C---------
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-------KK---DWLNNVASR-T---------  230 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-------~~---~~~~~~~~~-~---------  230 (280)
                      .....|+.+|.+.+.+++.++.+..  ++++..++++.+..+.....+       ..   .+....... .         
T Consensus       144 ~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (338)
T PRK10675        144 TPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGND  221 (338)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCc
Confidence            2357899999999999999876642  467777776554433211000       00   111111111 0         


Q ss_pred             CC------CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          231 YP------LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       231 ~p------~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      .|      ...+...+ |+++++..++........|+++++-+|..++..
T Consensus       222 ~~~~~g~~~~~~v~v~-D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  270 (338)
T PRK10675        222 YPTEDGTGVRDYIHVM-DLADGHVAAMEKLANKPGVHIYNLGAGVGSSVL  270 (338)
T ss_pred             CCCCCCcEEEeeEEHH-HHHHHHHHHHHhhhccCCCceEEecCCCceeHH
Confidence            01      12356677 899887766643212233578999888766543

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.73  E-value=1.2e-15  Score=135.19  Aligned_cols=231  Identities=18%  Similarity=0.225  Sum_probs=144.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHH---HHHHHHHHhhcCC----C-cceEEEEeccCCCHHHH-HH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRL---KSLCDEINKQSGS----S-VRAMAVELDVSANGAAI-EN   89 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~---~~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~-~~   89 (280)
                      +++||||+|+||+++++.|+++|  ++|+++.|+.+..   +.+.+.+......    . .++.++.+|+++..-.+ ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6799999975422   2222222211100    0 36888899987311000 11


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      ....+   ...+|++||+|+.....        ..+...+++|+.++..+++.+..     .+..++|++||........
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~-----~~~~~~v~iSS~~v~~~~~  144 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAAS-----GRAKPLHYVSTISVLAAID  144 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhh-----CCCceEEEEccccccCCcC
Confidence            11222   23799999999875221        12456778999999988887632     2244699999986653210


Q ss_pred             C--------------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhh-----c
Q 023555          170 L--------------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVAS-----R  229 (280)
Q Consensus       170 ~--------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~-----~  229 (280)
                      .              .....|+.+|.+.+.+++.++.    .|++++.++||.+..+..... ....+......     .
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~  220 (367)
T TIGR01746       145 LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG  220 (367)
T ss_pred             CCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC
Confidence            0              1134799999999998877554    389999999999987532211 11122211110     1


Q ss_pred             CCCC-----CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          230 TYPL-----RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       230 ~~p~-----~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ..|.     ..+...+ +++.++..++.......+|+++.+.++..++
T Consensus       221 ~~p~~~~~~~~~~~vd-dva~ai~~~~~~~~~~~~~~~~~v~~~~~~s  267 (367)
T TIGR01746       221 AYPDSPELTEDLTPVD-YVARAIVALSSQPAASAGGPVFHVVNPEPVS  267 (367)
T ss_pred             CCCCCCccccCcccHH-HHHHHHHHHHhCCCcccCCceEEecCCCCCC
Confidence            1222     1244455 8999998887655444558899998865443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.73  E-value=2.8e-16  Score=137.34  Aligned_cols=216  Identities=17%  Similarity=0.121  Sum_probs=145.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++++||||+|+||+++++.|+++|++|++++|+.+.....    .     ...+.++.+|++ +.+++.++++       
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-----~~~~~~~~~D~~-~~~~l~~~~~-------   63 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E-----GLDVEIVEGDLR-DPASLRKAVA-------   63 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c-----cCCceEEEeeCC-CHHHHHHHHh-------
Confidence            4799999999999999999999999999999986553221    1     124677899998 6666666554       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC---------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL---------  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~---------  170 (280)
                      .+|++||+++...    ..   .++.+..+++|+.++..+++++..    . +.+++|++||...+.....         
T Consensus        64 ~~d~vi~~a~~~~----~~---~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~  131 (328)
T TIGR03466        64 GCRALFHVAADYR----LW---APDPEEMYAANVEGTRNLLRAALE----A-GVERVVYTSSVATLGVRGDGTPADETTP  131 (328)
T ss_pred             CCCEEEEeceecc----cC---CCCHHHHHHHHHHHHHHHHHHHHH----h-CCCeEEEEechhhcCcCCCCCCcCccCC
Confidence            6899999997541    11   123466788999999999888632    2 2469999999765431100         


Q ss_pred             ----CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhhcCCCC-----CCCCCCh
Q 023555          171 ----PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRTYPL-----RDFGTTD  240 (280)
Q Consensus       171 ----~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~p~-----~~~~~~~  240 (280)
                          .....|+.+|.+.+.+++.++.+   .++++..++|+.+..+...... .............|.     ..+...+
T Consensus       132 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  208 (328)
T TIGR03466       132 SSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVD  208 (328)
T ss_pred             CCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHH
Confidence                01347999999999999988765   3789999999988665432111 111222222111221     1244566


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       |+++++..++...   ..|+.+.+. |..++
T Consensus       209 -D~a~a~~~~~~~~---~~~~~~~~~-~~~~s  235 (328)
T TIGR03466       209 -DVAEGHLLALERG---RIGERYILG-GENLT  235 (328)
T ss_pred             -HHHHHHHHHHhCC---CCCceEEec-CCCcC
Confidence             8999887776542   367888875 44433

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.73  E-value=7.6e-16  Score=129.94  Aligned_cols=203  Identities=18%  Similarity=0.164  Sum_probs=128.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..++|+++||||+|+||+++++.|+++|++|+++.|+.++.......       ...+.++.+|+++..+.+   .+   
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~~l---~~---   80 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-------DPSLQIVRADVTEGSDKL---VE---   80 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc-------CCceEEEEeeCCCCHHHH---HH---
Confidence            45678999999999999999999999999999999987765432211       125778899998422222   22   


Q ss_pred             HHc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-CCCCC
Q 023555           96 EAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-QLPGG  173 (280)
Q Consensus        96 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-~~~~~  173 (280)
                       .. .++|++|+++|......+.         ..+++|..+...+++++    .+. +.+++|++||...+... +.+..
T Consensus        81 -~~~~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~----~~~-~~~~iV~iSS~~v~g~~~~~~~~  145 (251)
T PLN00141         81 -AIGDDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEAC----RKA-GVTRFILVSSILVNGAAMGQILN  145 (251)
T ss_pred             -HhhcCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHH----HHc-CCCEEEEEccccccCCCcccccC
Confidence             22 2799999999864211111         12467888888888876    232 35799999997643211 12233


Q ss_pred             CCChhhHHHHHHH-HHHHHHH-hCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          174 VAYASSKAGLNAM-TKCLSLE-LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       174 ~~Y~~sK~a~~~l-~~~la~~-~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ..|...|.....+ .+..+.+ +...|++++.|+||++.++........      .....+......++ |+|+.+..++
T Consensus       146 ~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~------~~~~~~~~~~i~~~-dvA~~~~~~~  218 (251)
T PLN00141        146 PAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM------EPEDTLYEGSISRD-QVAEVAVEAL  218 (251)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE------CCCCccccCcccHH-HHHHHHHHHh
Confidence            4566666544433 3333332 356799999999999877643211100      00001122345666 9999998887


Q ss_pred             cC
Q 023555          252 HD  253 (280)
Q Consensus       252 s~  253 (280)
                      ..
T Consensus       219 ~~  220 (251)
T PLN00141        219 LC  220 (251)
T ss_pred             cC
Confidence            54

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.72  E-value=2.9e-16  Score=138.86  Aligned_cols=229  Identities=14%  Similarity=0.134  Sum_probs=148.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCe-EEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|||||+|+||++++++|+++|.+ |+.+++..  ...+... .+   . ...++.++.+|++ +.+++.++++.    
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~---~-~~~~~~~~~~Dl~-d~~~~~~~~~~----   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DV---S-DSERYVFEHADIC-DRAELDRIFAQ----   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hc---c-cCCceEEEEecCC-CHHHHHHHHHh----
Confidence            5999999999999999999999987 55555532  1122111 11   1 1235677899999 67788777764    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc----CCCCeEEEEeccccccCC-----
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA----NQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~vv~vsS~~~~~~~-----  168 (280)
                       .++|++||+|+......     ..+..++.+++|+.++.++++++.++|...    ++..++|++||...+...     
T Consensus        72 -~~~d~vih~A~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (352)
T PRK10084         72 -HQPDAVMHLAAESHVDR-----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE  145 (352)
T ss_pred             -cCCCEEEECCcccCCcc-----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence             27999999998752211     122346689999999999999998776431    113489999996433210     


Q ss_pred             --------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC-ccchhhhhhhhhc-CCC
Q 023555          169 --------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG-LMKKDWLNNVASR-TYP  232 (280)
Q Consensus       169 --------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~-~~~~~~~~~~~~~-~~p  232 (280)
                                    +..+...|+.||.+.+.+++.++.++   |+++..+.|+.+..+.... ..-.......... ..+
T Consensus       146 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  222 (352)
T PRK10084        146 VENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (352)
T ss_pred             ccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeE
Confidence                          11234689999999999999998876   5666667777666553210 0001111111111 112


Q ss_pred             -------CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          233 -------LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       233 -------~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                             .+.+...+ |++.++..++...   ..|+.+++-++..++
T Consensus       223 ~~~~g~~~~~~v~v~-D~a~a~~~~l~~~---~~~~~yni~~~~~~s  265 (352)
T PRK10084        223 IYGKGDQIRDWLYVE-DHARALYKVVTEG---KAGETYNIGGHNEKK  265 (352)
T ss_pred             EeCCCCeEEeeEEHH-HHHHHHHHHHhcC---CCCceEEeCCCCcCc
Confidence                   23356677 9999987777532   246788887776544

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.72  E-value=3.7e-17  Score=137.64  Aligned_cols=225  Identities=20%  Similarity=0.203  Sum_probs=146.6

Q ss_pred             EEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCC-Cc--ceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGS-SV--RAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~-~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ||||||+|.||++++++|++.+. ++++++|++.++..+..++.+..+. ..  .+..+.+|++ +.+.+++++++.   
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr-d~~~l~~~~~~~---   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR-DKERLNRIFEEY---   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC-HHHHHHHHTT-----
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc-CHHHHHHHHhhc---
Confidence            79999999999999999999987 6999999999999999988654432 22  3346688999 666666666643   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                        ++|+++|.|+.-+.  +..+.   ...+.+++|+.|+.++++++..+     +-.++|++|+--+..     +...|+
T Consensus        77 --~pdiVfHaAA~KhV--pl~E~---~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv~-----PtnvmG  139 (293)
T PF02719_consen   77 --KPDIVFHAAALKHV--PLMED---NPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAVN-----PTNVMG  139 (293)
T ss_dssp             --T-SEEEE------H--HHHCC---CHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCSS-------SHHH
T ss_pred             --CCCEEEEChhcCCC--ChHHh---CHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccCC-----CCcHHH
Confidence              89999999987432  22232   34567999999999999998542     256999999966543     336899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC--------CCCCCChHHHHHHHHH
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL--------RDFGTTDPALTSLVRY  249 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~va~~~~~  249 (280)
                      +||...+.++.+.+......+.++.+|+=|-|-.....-+   +.+.+..++.-|+        +.+.+++ |+++++..
T Consensus       140 atKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVi---p~F~~Qi~~g~PlTvT~p~mtRffmti~-EAv~Lvl~  215 (293)
T PF02719_consen  140 ATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVI---PLFKKQIKNGGPLTVTDPDMTRFFMTIE-EAVQLVLQ  215 (293)
T ss_dssp             HHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCH---HHHHHHHHTTSSEEECETT-EEEEE-HH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHH---HHHHHHHHcCCcceeCCCCcEEEEecHH-HHHHHHHH
Confidence            9999999999999998877789999999887754322211   1222222222333        3456677 88888766


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      .+.-   ...|+++..|-|..+...
T Consensus       216 a~~~---~~~geifvl~mg~~v~I~  237 (293)
T PF02719_consen  216 AAAL---AKGGEIFVLDMGEPVKIL  237 (293)
T ss_dssp             HHHH-----TTEEEEE---TCEECC
T ss_pred             HHhh---CCCCcEEEecCCCCcCHH
Confidence            5542   236899999998877654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.71  E-value=5.9e-16  Score=135.13  Aligned_cols=231  Identities=16%  Similarity=0.130  Sum_probs=149.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|+||++++++|.++|++|++++|...........+...    .++..+.+|++ +.++++++++.     ++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~-~~~~~~~~~~~-----~~   70 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI----TRVTFVEGDLR-DRELLDRLFEE-----HK   70 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc----cceEEEECCCC-CHHHHHHHHHh-----CC
Confidence            4799999999999999999999999998876543322222222110    14667889999 67777777663     47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CCC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QLP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~~  171 (280)
                      +|++||+||.....     ...++..+.++.|+.++..+++++.    +.+ .+++|++||...+...         +..
T Consensus        71 ~d~vv~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~  140 (328)
T TIGR01179        71 IDAVIHFAGLIAVG-----ESVQDPLKYYRNNVVNTLNLLEAMQ----QTG-VKKFIFSSSAAVYGEPSSIPISEDSPLG  140 (328)
T ss_pred             CcEEEECccccCcc-----hhhcCchhhhhhhHHHHHHHHHHHH----hcC-CCEEEEecchhhcCCCCCCCccccCCCC
Confidence            99999999975321     1223445678899999999988752    222 4689999986543211         111


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc------ch---hhhhhhhh-c---------CCC
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM------KK---DWLNNVAS-R---------TYP  232 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~------~~---~~~~~~~~-~---------~~p  232 (280)
                      +...|+.+|++.+.+++.++.+.  .++++..+.|+.+..+......      ..   +.+..... .         ..|
T Consensus       141 ~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (328)
T TIGR01179       141 PINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYP  218 (328)
T ss_pred             CCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCccc
Confidence            34679999999999999988652  4789999999877665321110      00   01111110 0         011


Q ss_pred             C------CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          233 L------RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       233 ~------~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      .      ..+...+ |+++++..++........|+.+++.+|..++..
T Consensus       219 ~~~g~~~~~~v~~~-D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~  265 (328)
T TIGR01179       219 TPDGTCVRDYIHVM-DLADAHLAALEYLLNGGESHVYNLGYGQGFSVL  265 (328)
T ss_pred             CCCCceEEeeeeHH-HHHHHHHHHHhhhhcCCCcceEEcCCCCcccHH
Confidence            1      1234456 999988877753323345678888777665543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.69  E-value=2.1e-15  Score=135.05  Aligned_cols=227  Identities=17%  Similarity=0.226  Sum_probs=144.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++.++||||||+|.||++++++|+++ |++|++++|+.+...........  ....++.++.+|++ +.+.+.++++  
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~--~~~~~~~~~~~Dl~-d~~~l~~~~~--   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV--PWSGRIQFHRINIK-HDSRLEGLIK--   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc--cCCCCeEEEEcCCC-ChHHHHHHhh--
Confidence            456678999999999999999999998 58999999876554332211000  01125778899999 5666665554  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           .+|+|||+|+...+.. . .   ++-.+.+..|+.++.++++++.    + . +.++|++||...+...      
T Consensus        86 -----~~d~ViHlAa~~~~~~-~-~---~~~~~~~~~n~~gt~~ll~aa~----~-~-~~r~v~~SS~~vYg~~~~~~~~  149 (386)
T PLN02427         86 -----MADLTINLAAICTPAD-Y-N---TRPLDTIYSNFIDALPVVKYCS----E-N-NKRLIHFSTCEVYGKTIGSFLP  149 (386)
T ss_pred             -----cCCEEEEcccccChhh-h-h---hChHHHHHHHHHHHHHHHHHHH----h-c-CCEEEEEeeeeeeCCCcCCCCC
Confidence                 4899999998753211 1 1   1112345679999999888762    2 2 2599999996543210      


Q ss_pred             ---CC----------------------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc------
Q 023555          169 ---QL----------------------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL------  217 (280)
Q Consensus       169 ---~~----------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~------  217 (280)
                         +.                      .....|+.||.+.+.+++.++..   .|+.+..++|+.+..+.....      
T Consensus       150 e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~  226 (386)
T PLN02427        150 KDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP  226 (386)
T ss_pred             cccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccc
Confidence               00                      01236999999999999876654   489999999998887642110      


Q ss_pred             ---cch---hhhhhhhhcC-C-------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          218 ---MKK---DWLNNVASRT-Y-------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       218 ---~~~---~~~~~~~~~~-~-------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                         ...   .+........ .       ..+.+...+ |+++++..++... ....|+.+++-+|
T Consensus       227 ~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~-Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        227 SEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIK-DAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             ccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHH-HHHHHHHHHHhCc-ccccCceEEeCCC
Confidence               000   0111111111 1       112456677 9999988777532 2235778888765

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.68  E-value=2.2e-15  Score=128.84  Aligned_cols=224  Identities=17%  Similarity=0.160  Sum_probs=148.5

Q ss_pred             EEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           23 MVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        23 lItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      |||||+|.||++++++|.++|  ++|.++++.......  ..+..    .....++.+|++ +.++++++++       +
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~----~~~~~~~~~Di~-d~~~l~~a~~-------g   66 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK----SGVKEYIQGDIT-DPESLEEALE-------G   66 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc----ccceeEEEeccc-cHHHHHHHhc-------C
Confidence            699999999999999999999  688888887643221  11111    112338999999 6777777776       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------------
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------------  168 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------------  168 (280)
                      +|++||.|+......      ....+.++++|+.|+-++++++..     .+-.++|++||.+.....            
T Consensus        67 ~d~V~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~-----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~  135 (280)
T PF01073_consen   67 VDVVFHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARK-----AGVKRLVYTSSISVVFDNYKGDPIINGDED  135 (280)
T ss_pred             CceEEEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHH-----cCCCEEEEEcCcceeEeccCCCCcccCCcC
Confidence            899999998753221      234577899999999999998843     235699999998765430            


Q ss_pred             -C--CCCCCCChhhHHHHHHHHHHHHHHhCC--CCeEEEEeecCcccCccccCccchh--hhhh-----hhhcCCCCCCC
Q 023555          169 -Q--LPGGVAYASSKAGLNAMTKCLSLELGV--HKIRVNSICPGLFKSEITEGLMKKD--WLNN-----VASRTYPLRDF  236 (280)
Q Consensus       169 -~--~~~~~~Y~~sK~a~~~l~~~la~~~~~--~gi~vn~v~pG~v~t~~~~~~~~~~--~~~~-----~~~~~~p~~~~  236 (280)
                       +  ......|+.||+..|.++......-.+  ..++..+|+|..|-.+.-....+.-  ....     ......-+..+
T Consensus       136 ~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~  215 (280)
T PF01073_consen  136 TPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDF  215 (280)
T ss_pred             CcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECc
Confidence             0  013458999999999998876651111  2589999999998777543322111  0000     01010112235


Q ss_pred             CCChHHHHHHHHHhhc---CC--CCcccccEEEeCCcccCC
Q 023555          237 GTTDPALTSLVRYLVH---DS--SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s---~~--~~~i~G~~i~vdgG~~~~  272 (280)
                      ...+ ++|.+......   ..  ...+.||.+.+..|-.+.
T Consensus       216 vyV~-NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  216 VYVE-NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             EeHH-HHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            5566 77775543221   22  467899999998776654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.68  E-value=1.5e-15  Score=134.15  Aligned_cols=223  Identities=13%  Similarity=0.182  Sum_probs=143.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++||||||+|.||++++++|+++ |++|+.++|+.+......    .    ...+.++.+|++++.+.+.++++      
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----~----~~~~~~~~~Dl~~~~~~~~~~~~------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----N----HPRMHFFEGDITINKEWIEYHVK------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----c----CCCeEEEeCCCCCCHHHHHHHHc------
Confidence            47999999999999999999986 799999998764332211    1    12477788999744444434332      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---C-----
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---L-----  170 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---~-----  170 (280)
                       ++|+|||.|+...+..     ..++.+..+++|+.++.++++++.    + . +.++|++||...+....   .     
T Consensus        68 -~~d~ViH~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~----~-~-~~~~v~~SS~~vyg~~~~~~~~ee~~  135 (347)
T PRK11908         68 -KCDVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAV----K-Y-GKHLVFPSTSEVYGMCPDEEFDPEAS  135 (347)
T ss_pred             -CCCEEEECcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHH----h-c-CCeEEEEecceeeccCCCcCcCcccc
Confidence             6899999998643211     112234667999999998888763    2 2 35999999975432110   0     


Q ss_pred             --------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-----c----hhhhhhhhhc----
Q 023555          171 --------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-----K----KDWLNNVASR----  229 (280)
Q Consensus       171 --------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-----~----~~~~~~~~~~----  229 (280)
                              .....|+.||.+.+.+++.++..   .|+.+..+.|+.+..+......     .    ...+......    
T Consensus       136 ~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  212 (347)
T PRK11908        136 PLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPIS  212 (347)
T ss_pred             ccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceE
Confidence                    01226999999999999988765   3778888888877665421110     0    0111111111    


Q ss_pred             ----CCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc-ccCC
Q 023555          230 ----TYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG-ATLP  272 (280)
Q Consensus       230 ----~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG-~~~~  272 (280)
                          ....+.+...+ |+++++..++........|+.+++.++ ..++
T Consensus       213 ~~~~g~~~r~~i~v~-D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s  259 (347)
T PRK11908        213 LVDGGSQKRAFTDID-DGIDALMKIIENKDGVASGKIYNIGNPKNNHS  259 (347)
T ss_pred             EecCCceeeccccHH-HHHHHHHHHHhCccccCCCCeEEeCCCCCCcC
Confidence                11223467777 999988887754322245788999775 3443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=7e-15  Score=121.77  Aligned_cols=226  Identities=15%  Similarity=0.181  Sum_probs=152.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++|||||+|+||..+++.+.++..  +|+.++.-.  ...+.+ +.+.    ...+..+++.|+. +.+.+.+++++- 
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~----~~~~~~fv~~DI~-D~~~v~~~~~~~-   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE----DSPRYRFVQGDIC-DRELVDRLFKEY-   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh----cCCCceEEecccc-CHHHHHHHHHhc-
Confidence            4789999999999999999998865  367776521  122222 2221    1247899999999 667777766653 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc---------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS---------  166 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~---------  166 (280)
                          .+|+++|-|+-.+..+     +.++-...+++|+.|+++|++++..+..+    =|++.||.-.-+.         
T Consensus        74 ----~~D~VvhfAAESHVDR-----SI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~~~~F  140 (340)
T COG1088          74 ----QPDAVVHFAAESHVDR-----SIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLDDDAF  140 (340)
T ss_pred             ----CCCeEEEechhccccc-----cccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCCCCCc
Confidence                7999999998765544     34445678999999999999998544321    3899999733221         


Q ss_pred             --CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc--cCccchhhhhhhhhcCCCC-------CC
Q 023555          167 --RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT--EGLMKKDWLNNVASRTYPL-------RD  235 (280)
Q Consensus       167 --~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~--~~~~~~~~~~~~~~~~~p~-------~~  235 (280)
                        ..++.+.+.|++||||-..|++++.+.|   |+.+....+.--..|-.  +++.+.........+..|+       ++
T Consensus       141 tE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRD  217 (340)
T COG1088         141 TETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRD  217 (340)
T ss_pred             ccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceee
Confidence              1244567899999999999999999997   67776666643333322  1222222233333343444       33


Q ss_pred             CCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ....+ |=+.++..++...   ..|+++++.||-...
T Consensus       218 Wl~Ve-Dh~~ai~~Vl~kg---~~GE~YNIgg~~E~~  250 (340)
T COG1088         218 WLYVE-DHCRAIDLVLTKG---KIGETYNIGGGNERT  250 (340)
T ss_pred             eEEeH-hHHHHHHHHHhcC---cCCceEEeCCCccch
Confidence            45566 7777776666532   239999999986543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.67  E-value=4.5e-15  Score=123.63  Aligned_cols=214  Identities=18%  Similarity=0.233  Sum_probs=150.8

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      ||||||+|.||.++++.|.++|+.|+.+.|............        ++.+..+|+. +.+.++++++..     .+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~dl~-~~~~~~~~~~~~-----~~   66 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--------NVEFVIGDLT-DKEQLEKLLEKA-----NI   66 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--------TEEEEESETT-SHHHHHHHHHHH-----TE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--------eEEEEEeecc-cccccccccccc-----Cc
Confidence            799999999999999999999999888887765443322221        6788999999 778888888865     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-CC--------CC
Q 023555          102 DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-QL--------PG  172 (280)
Q Consensus       102 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-~~--------~~  172 (280)
                      |.+||.|+...     ...+.+.....++.|+.++.++++++    .+.+ ..++|++||...+... ..        ..
T Consensus        67 d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~  136 (236)
T PF01370_consen   67 DVVIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAA----REAG-VKRFIFLSSASVYGDPDGEPIDEDSPINP  136 (236)
T ss_dssp             SEEEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHH----HHHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCH
T ss_pred             eEEEEeecccc-----cccccccccccccccccccccccccc----cccc-ccccccccccccccccccccccccccccc
Confidence            99999998742     11223556778888998888888877    3333 3699999996554322 01        13


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc----ccCccchhhhhhhhhcC-C-------CCCCCCCCh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI----TEGLMKKDWLNNVASRT-Y-------PLRDFGTTD  240 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~----~~~~~~~~~~~~~~~~~-~-------p~~~~~~~~  240 (280)
                      ...|+.+|...+.+++.+....   ++++..+.|+.+..+.    .....-..+........ .       ....+...+
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  213 (236)
T PF01370_consen  137 LSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVD  213 (236)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHH
T ss_pred             cccccccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHH
Confidence            4569999999999999998876   8999999999988877    11111122222222211 1       112344566


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEe
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIV  265 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~v  265 (280)
                       |+++++.+++....  ..|+.++|
T Consensus       214 -D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  214 -DLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             -HHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             -HHHHHHHHHHhCCC--CCCCEEEe
Confidence             99999988886554  66777765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.65  E-value=1e-14  Score=138.96  Aligned_cols=223  Identities=13%  Similarity=0.148  Sum_probs=145.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -++++||||||+|.||++++++|+++ |++|+.++|........   +     ...++.++.+|+++....+++++    
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~-----~~~~~~~~~gDl~d~~~~l~~~l----  380 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L-----GHPRFHFVEGDISIHSEWIEYHI----  380 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c-----CCCceEEEeccccCcHHHHHHHh----
Confidence            35778999999999999999999986 79999999976433221   1     11256778899984322233333    


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---CC--
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---QL--  170 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---~~--  170 (280)
                         .++|++||.|+...+...     .++.+..+++|+.++.++++++..     . +.++|++||...+...   +.  
T Consensus       381 ---~~~D~ViHlAa~~~~~~~-----~~~~~~~~~~Nv~~t~~ll~a~~~-----~-~~~~V~~SS~~vyg~~~~~~~~E  446 (660)
T PRK08125        381 ---KKCDVVLPLVAIATPIEY-----TRNPLRVFELDFEENLKIIRYCVK-----Y-NKRIIFPSTSEVYGMCTDKYFDE  446 (660)
T ss_pred             ---cCCCEEEECccccCchhh-----ccCHHHHHHhhHHHHHHHHHHHHh-----c-CCeEEEEcchhhcCCCCCCCcCc
Confidence               269999999987533211     112245788999999999988742     2 2589999996543210   00  


Q ss_pred             --------C---CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhh-c
Q 023555          171 --------P---GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVAS-R  229 (280)
Q Consensus       171 --------~---~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~-~  229 (280)
                              |   +...|+.||.+.+.+++.++..+   |+++..+.|+.+..+......         -..+...... +
T Consensus       447 ~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~  523 (660)
T PRK08125        447 DTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  523 (660)
T ss_pred             cccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCC
Confidence                    1   12369999999999999887664   789999999988776422110         0111111111 1


Q ss_pred             CC-------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          230 TY-------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       230 ~~-------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      ..       ..+.+...+ |+++++..++........|+.+++-+|.
T Consensus       524 ~i~~~g~g~~~rd~i~v~-Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        524 PIKLVDGGKQKRCFTDIR-DGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CeEEeCCCceeeceeeHH-HHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            11       123466677 8999887777543233468888887764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.64  E-value=4.5e-14  Score=135.00  Aligned_cols=230  Identities=15%  Similarity=0.154  Sum_probs=147.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh--CCeEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..++|+||||||+|.||++++++|.++  |++|+.++|..  +.......    . ....++.++.+|++ +.+.+..++
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~----~-~~~~~v~~~~~Dl~-d~~~~~~~~   76 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP----S-KSSPNFKFVKGDIA-SADLVNYLL   76 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh----c-ccCCCeEEEECCCC-ChHHHHHHH
Confidence            357899999999999999999999998  67898888753  12221111    0 01235778899999 555555443


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---  168 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---  168 (280)
                      ..     .++|+|||+|+.....     ...++....+++|+.++..+++++.    +.+...++|++||...+...   
T Consensus        77 ~~-----~~~D~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~vkr~I~~SS~~vyg~~~~~  142 (668)
T PLN02260         77 IT-----EGIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDED  142 (668)
T ss_pred             hh-----cCCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEcchHHhCCCccc
Confidence            22     3799999999975321     1122334678999999999988762    22224699999996543211   


Q ss_pred             ---------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhh-cCCCC----
Q 023555          169 ---------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVAS-RTYPL----  233 (280)
Q Consensus       169 ---------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~-~~~p~----  233 (280)
                               +..+...|+.+|.+.+.+++.++.++   ++.+..++|+.+..+...... -..+...... ...+.    
T Consensus       143 ~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g  219 (668)
T PLN02260        143 ADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDG  219 (668)
T ss_pred             cccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCC
Confidence                     01124579999999999999887764   788999999988766432110 0111111111 11111    


Q ss_pred             ---CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          234 ---RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       234 ---~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                         +.+...+ |+++++..++...   ..|+++++-++..++
T Consensus       220 ~~~r~~ihV~-Dva~a~~~~l~~~---~~~~vyni~~~~~~s  257 (668)
T PLN02260        220 SNVRSYLYCE-DVAEAFEVVLHKG---EVGHVYNIGTKKERR  257 (668)
T ss_pred             CceEeeEEHH-HHHHHHHHHHhcC---CCCCEEEECCCCeeE
Confidence               2345566 8999887776432   246788887765443

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.64  E-value=1.9e-14  Score=128.09  Aligned_cols=224  Identities=13%  Similarity=0.032  Sum_probs=144.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .-++|+||||||+|.||+++++.|.++|++|+.++|......   .   .   ......++.+|++ +.+.+..++.   
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~---~---~~~~~~~~~~Dl~-d~~~~~~~~~---   84 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---S---E---DMFCHEFHLVDLR-VMENCLKVTK---   84 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---c---c---ccccceEEECCCC-CHHHHHHHHh---
Confidence            347899999999999999999999999999999998643211   0   0   0112356788998 5555444432   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                          ++|+|||.|+........ .   .+....+..|+.++.++++++.    +. +..++|++||...+...       
T Consensus        85 ----~~D~Vih~Aa~~~~~~~~-~---~~~~~~~~~N~~~t~nll~aa~----~~-~vk~~V~~SS~~vYg~~~~~~~~~  151 (370)
T PLN02695         85 ----GVDHVFNLAADMGGMGFI-Q---SNHSVIMYNNTMISFNMLEAAR----IN-GVKRFFYASSACIYPEFKQLETNV  151 (370)
T ss_pred             ----CCCEEEEcccccCCcccc-c---cCchhhHHHHHHHHHHHHHHHH----Hh-CCCEEEEeCchhhcCCccccCcCC
Confidence                689999999865321111 1   1123456789999999988762    22 24699999996432210       


Q ss_pred             --------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC-----ccchhhhhhhhh--cCCC-
Q 023555          169 --------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG-----LMKKDWLNNVAS--RTYP-  232 (280)
Q Consensus       169 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~-----~~~~~~~~~~~~--~~~p-  232 (280)
                              +..+...|+.+|.+.+.+++.++..+   |+++..+.|+.+..+....     .....+......  ...+ 
T Consensus       152 ~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~  228 (370)
T PLN02695        152 SLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEM  228 (370)
T ss_pred             CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEE
Confidence                    12234589999999999999887764   7999999999888764211     111122222221  1111 


Q ss_pred             ------CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          233 ------LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       233 ------~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                            ...+...+ |++.++.+++...    .++.+++-+|..++.
T Consensus       229 ~g~g~~~r~~i~v~-D~a~ai~~~~~~~----~~~~~nv~~~~~~s~  270 (370)
T PLN02695        229 WGDGKQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVSM  270 (370)
T ss_pred             eCCCCeEEeEEeHH-HHHHHHHHHHhcc----CCCceEecCCCceeH
Confidence                  12345666 8999988776532    246788877765443

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.63  E-value=5.8e-15  Score=128.24  Aligned_cols=216  Identities=17%  Similarity=0.180  Sum_probs=134.8

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH--HcC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE--AFG   99 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~g   99 (280)
                      ||||||+|.||++++++|+++|++++++.|+....... ..            ...+|+. +..+.+.+++.+.+  .++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~------------~~~~~~~-d~~~~~~~~~~~~~~~~~~   67 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN------------LVDLDIA-DYMDKEDFLAQIMAGDDFG   67 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh------------hhhhhhh-hhhhHHHHHHHHhcccccC
Confidence            79999999999999999999999766665554322111 01            1234554 33444455554432  345


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------C
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------L  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------~  170 (280)
                      ++|+|||+|+.....    ..+.   ...++.|+.++.++++++.    +.  +.++|++||...+....         .
T Consensus        68 ~~d~Vih~A~~~~~~----~~~~---~~~~~~n~~~t~~ll~~~~----~~--~~~~i~~SS~~vyg~~~~~~~~E~~~~  134 (308)
T PRK11150         68 DIEAIFHEGACSSTT----EWDG---KYMMDNNYQYSKELLHYCL----ER--EIPFLYASSAATYGGRTDDFIEEREYE  134 (308)
T ss_pred             CccEEEECceecCCc----CCCh---HHHHHHHHHHHHHHHHHHH----Hc--CCcEEEEcchHHhCcCCCCCCccCCCC
Confidence            899999999864221    1122   3468999999999988873    22  24799999975433110         1


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC--ccch---hhhhhhhhcCCC---------CCCC
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG--LMKK---DWLNNVASRTYP---------LRDF  236 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~--~~~~---~~~~~~~~~~~p---------~~~~  236 (280)
                      .+...|+.+|.+.+.+++.++.+   .++.+..+.|+.+..+....  ....   ...........+         .+.+
T Consensus       135 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~  211 (308)
T PRK11150        135 KPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDF  211 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeee
Confidence            12357999999999998887665   37889999998877654321  1110   011112111111         2234


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ...+ |+++++..++...    .|.++++-+|..++
T Consensus       212 i~v~-D~a~a~~~~~~~~----~~~~yni~~~~~~s  242 (308)
T PRK11150        212 VYVG-DVAAVNLWFWENG----VSGIFNCGTGRAES  242 (308)
T ss_pred             eeHH-HHHHHHHHHHhcC----CCCeEEcCCCCcee
Confidence            5677 8999877776532    24588887776554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.62  E-value=7.2e-14  Score=125.08  Aligned_cols=217  Identities=16%  Similarity=0.170  Sum_probs=139.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH--HHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS--LCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ...++++++||||+|+||+++++.|.++|++|++++|+....+.  ...++...   ...+.++.+|++ +.++++++++
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~---~~~v~~v~~Dl~-d~~~l~~~~~  131 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE---LPGAEVVFGDVT-DADSLRKVLF  131 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh---cCCceEEEeeCC-CHHHHHHHHH
Confidence            35678899999999999999999999999999999998755321  11111111   125778899999 6777777776


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ..   ..++|+||||++...  ..    .    ...+++|+.++.++++++    ++. +.+++|++||.....     .
T Consensus       132 ~~---~~~~D~Vi~~aa~~~--~~----~----~~~~~vn~~~~~~ll~aa----~~~-gv~r~V~iSS~~v~~-----p  188 (390)
T PLN02657        132 SE---GDPVDVVVSCLASRT--GG----V----KDSWKIDYQATKNSLDAG----REV-GAKHFVLLSAICVQK-----P  188 (390)
T ss_pred             Hh---CCCCcEEEECCccCC--CC----C----ccchhhHHHHHHHHHHHH----HHc-CCCEEEEEeeccccC-----c
Confidence            43   126999999987531  11    0    123567888888887776    232 256899999976432     2


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhh-cCC-CCC-------CCCCChHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS-RTY-PLR-------DFGTTDPAL  243 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~-p~~-------~~~~~~~~v  243 (280)
                      ...|..+|...+...+.     ...+++...|+|+.+..++..      ....... ..+ +.+       .+...+ |+
T Consensus       189 ~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~------~~~~~~~g~~~~~~GdG~~~~~~~I~v~-Dl  256 (390)
T PLN02657        189 LLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG------QVEIVKDGGPYVMFGDGKLCACKPISEA-DL  256 (390)
T ss_pred             chHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHH------HHHhhccCCceEEecCCcccccCceeHH-HH
Confidence            34678889888876654     235899999999876543221      0111000 000 011       123445 88


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCC-cccCC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDS-GATLP  272 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdg-G~~~~  272 (280)
                      |..+..++...  ...|+++.+-| |..++
T Consensus       257 A~~i~~~~~~~--~~~~~~~~Iggp~~~~S  284 (390)
T PLN02657        257 ASFIADCVLDE--SKINKVLPIGGPGKALT  284 (390)
T ss_pred             HHHHHHHHhCc--cccCCEEEcCCCCcccC
Confidence            88777776432  23578899876 44444

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.60  E-value=5.3e-14  Score=122.34  Aligned_cols=219  Identities=18%  Similarity=0.168  Sum_probs=135.9

Q ss_pred             EEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ||||||+|.||.++++.|.++|+ .|++++|..... .. .++        ....+..|+. +.+..+.+.+.   .+++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~--------~~~~~~~d~~-~~~~~~~~~~~---~~~~   66 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL--------ADLVIADYID-KEDFLDRLEKG---AFGK   66 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh--------hheeeeccCc-chhHHHHHHhh---ccCC
Confidence            68999999999999999999998 688887754321 11 111        1123456665 44444443332   3468


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CCC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QLP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~~  171 (280)
                      +|++||+|+...       .+.++....+++|+.++..+++++..    .  +.++|++||...+...         ...
T Consensus        67 ~D~vvh~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~v~~SS~~vy~~~~~~~~e~~~~~~  133 (314)
T TIGR02197        67 IEAIFHQGACSD-------TTETDGEYMMENNYQYSKRLLDWCAE----K--GIPFIYASSAATYGDGEAGFREGRELER  133 (314)
T ss_pred             CCEEEECccccC-------ccccchHHHHHHHHHHHHHHHHHHHH----h--CCcEEEEccHHhcCCCCCCcccccCcCC
Confidence            999999998642       12234566889999999999988732    2  3489999996543211         011


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc--c---chhhhhhhhhcC-CC-------------
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL--M---KKDWLNNVASRT-YP-------------  232 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~--~---~~~~~~~~~~~~-~p-------------  232 (280)
                      +...|+.+|.+.+.+++....+.. .++++..+.|+.+..+.....  .   -..+........ .+             
T Consensus       134 p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (314)
T TIGR02197       134 PLNVYGYSKFLFDQYVRRRVLPEA-LSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQ  212 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHhHhhc-cCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCc
Confidence            456799999999999886443322 256788888887766542110  0   001111111111 11             


Q ss_pred             CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      .+.+...+ |+++++..++..    ..+.++++-++..++.
T Consensus       213 ~~~~i~v~-D~a~~i~~~~~~----~~~~~yni~~~~~~s~  248 (314)
T TIGR02197       213 LRDFVYVK-DVVDVNLWLLEN----GVSGIFNLGTGRARSF  248 (314)
T ss_pred             eeeeEEHH-HHHHHHHHHHhc----ccCceEEcCCCCCccH
Confidence            12345555 899998888764    2456888888766543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.60  E-value=2.1e-14  Score=130.18  Aligned_cols=220  Identities=13%  Similarity=0.070  Sum_probs=140.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .-++++||||||+|.||++++++|.++|++|++++|......+.....   . ...++.++..|+. +.     ++    
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~---~-~~~~~~~i~~D~~-~~-----~l----  181 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH---F-SNPNFELIRHDVV-EP-----IL----  181 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh---c-cCCceEEEECCcc-Ch-----hh----
Confidence            446789999999999999999999999999999887533221111111   1 1125667788887 32     11    


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                         ..+|+|||.|+...+..  .   .++....+++|+.++.++++++.    +.  +.++|++||...+...       
T Consensus       182 ---~~~D~ViHlAa~~~~~~--~---~~~p~~~~~~Nv~gt~nLleaa~----~~--g~r~V~~SS~~VYg~~~~~p~~E  247 (442)
T PLN02206        182 ---LEVDQIYHLACPASPVH--Y---KFNPVKTIKTNVVGTLNMLGLAK----RV--GARFLLTSTSEVYGDPLQHPQVE  247 (442)
T ss_pred             ---cCCCEEEEeeeecchhh--h---hcCHHHHHHHHHHHHHHHHHHHH----Hh--CCEEEEECChHHhCCCCCCCCCc
Confidence               25899999998653211  1   11235678999999999999873    22  2489999997644210       


Q ss_pred             -------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc----Cccchhhhhhhhh-cCCC----
Q 023555          169 -------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE----GLMKKDWLNNVAS-RTYP----  232 (280)
Q Consensus       169 -------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~----~~~~~~~~~~~~~-~~~p----  232 (280)
                             +......|+.+|.+.+.+++.+...+   ++++..+.|+.+..+...    ... ..+...... ..++    
T Consensus       248 ~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~~~~v-~~~i~~~l~~~~i~i~g~  323 (442)
T PLN02206        248 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDDGRVV-SNFVAQALRKEPLTVYGD  323 (442)
T ss_pred             cccccCCCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccccchH-HHHHHHHHcCCCcEEeCC
Confidence                   11124579999999999998876654   788888888777655321    111 112222221 1111    


Q ss_pred             ---CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          233 ---LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       233 ---~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                         .+.+...+ |+++++..++...   ..| .+++-+|..++
T Consensus       324 G~~~rdfi~V~-Dva~ai~~a~e~~---~~g-~yNIgs~~~~s  361 (442)
T PLN02206        324 GKQTRSFQFVS-DLVEGLMRLMEGE---HVG-PFNLGNPGEFT  361 (442)
T ss_pred             CCEEEeEEeHH-HHHHHHHHHHhcC---CCc-eEEEcCCCcee
Confidence               12355666 9999887776432   234 78887766544

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.59  E-value=7.6e-14  Score=116.16  Aligned_cols=152  Identities=18%  Similarity=0.112  Sum_probs=114.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +++|||||+|-||+++++.|++.|++|+++|.-...-.+.....        ...++..|+. |.+.+++++++-     
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~-D~~~L~~vf~~~-----   66 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLL-DRALLTAVFEEN-----   66 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccc-cHHHHHHHHHhc-----
Confidence            47999999999999999999999999999998654433333321        1568899999 666666666553     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~  170 (280)
                      ++|.+||-||.....     .+.++-.+.++.|+.|++.|++++    ++.+ -.++||-||...+...         +.
T Consensus        67 ~idaViHFAa~~~Vg-----ESv~~Pl~Yy~NNv~gTl~Ll~am----~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~  136 (329)
T COG1087          67 KIDAVVHFAASISVG-----ESVQNPLKYYDNNVVGTLNLIEAM----LQTG-VKKFIFSSTAAVYGEPTTSPISETSPL  136 (329)
T ss_pred             CCCEEEECccccccc-----hhhhCHHHHHhhchHhHHHHHHHH----HHhC-CCEEEEecchhhcCCCCCcccCCCCCC
Confidence            899999999976432     355666789999999999988876    4433 5688888876654311         11


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhC
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                      .....|+.||.+.+.+.+.+++.+.
T Consensus       137 ~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         137 APINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHhCC
Confidence            2345899999999999999998864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.58  E-value=4e-14  Score=122.65  Aligned_cols=207  Identities=17%  Similarity=0.133  Sum_probs=134.7

Q ss_pred             EEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 023555           23 MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRID  102 (280)
Q Consensus        23 lItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  102 (280)
                      |||||+|.||.++++.|.+.|++|+++.+.                       ..+|++ +.++++++++..     ++|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~-~~~~l~~~~~~~-----~~d   51 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLT-RQADVEAFFAKE-----KPT   51 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCC-CHHHHHHHHhcc-----CCC
Confidence            699999999999999999999988766432                       147888 666666665542     689


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------------C
Q 023555          103 ALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------------Q  169 (280)
Q Consensus       103 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------------~  169 (280)
                      +|||+|+.....  ..  ..++....+++|+.++.++++++.    +.+ .+++|++||...+...             +
T Consensus        52 ~Vih~A~~~~~~--~~--~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~  122 (306)
T PLN02725         52 YVILAAAKVGGI--HA--NMTYPADFIRENLQIQTNVIDAAY----RHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGP  122 (306)
T ss_pred             EEEEeeeeeccc--ch--hhhCcHHHHHHHhHHHHHHHHHHH----HcC-CCeEEEeCceeecCCCCCCCCCHHHhccCC
Confidence            999999874211  00  112224568889999999988873    222 4689999996543211             0


Q ss_pred             -CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhh-------------hhcC
Q 023555          170 -LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNV-------------ASRT  230 (280)
Q Consensus       170 -~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~-------------~~~~  230 (280)
                       .|....|+.||.+.+.+++.+..++   ++++..+.|+.+..+.....     .-.......             ....
T Consensus       123 ~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g  199 (306)
T PLN02725        123 PEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSG  199 (306)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCC
Confidence             0112349999999999888887664   78999999998877642100     001111110             0111


Q ss_pred             CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          231 YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       231 ~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      .+...+...+ |+++++.+++....   .+..+++.+|..++..
T Consensus       200 ~~~~~~i~v~-Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s~~  239 (306)
T PLN02725        200 SPLREFLHVD-DLADAVVFLMRRYS---GAEHVNVGSGDEVTIK  239 (306)
T ss_pred             CeeeccccHH-HHHHHHHHHHhccc---cCcceEeCCCCcccHH
Confidence            1233567777 99999988876431   2345688777665543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.57  E-value=3e-13  Score=116.17  Aligned_cols=201  Identities=15%  Similarity=0.160  Sum_probs=129.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|.||+++++.|.++|++|++++|.                        .+|+. +.+.++++++..     .
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~-~~~~~~~~~~~~-----~   50 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLT-DPEALERLLRAI-----R   50 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCC-CHHHHHHHHHhC-----C
Confidence            37999999999999999999999999999884                        35777 667777776542     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CCC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QLP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~~  171 (280)
                      +|++||+++.....     .........+++|+.++.++++++.    +.  +.++|++||...+...         +..
T Consensus        51 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~--~~~~v~~Ss~~vy~~~~~~~~~E~~~~~  119 (287)
T TIGR01214        51 PDAVVNTAAYTDVD-----GAESDPEKAFAVNALAPQNLARAAA----RH--GARLVHISTDYVFDGEGKRPYREDDATN  119 (287)
T ss_pred             CCEEEECCcccccc-----ccccCHHHHHHHHHHHHHHHHHHHH----Hc--CCeEEEEeeeeeecCCCCCCCCCCCCCC
Confidence            89999999864221     1122345678999999999998863    22  2489999986543210         011


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhc-CCC-----CCCCCCChHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-TYP-----LRDFGTTDPALTS  245 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~p-----~~~~~~~~~~va~  245 (280)
                      ....|+.+|.+.+.+++.+       +.++..++|+.+..+................. ..+     ...+...+ |+++
T Consensus       120 ~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-Dva~  191 (287)
T TIGR01214       120 PLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAK-DLAR  191 (287)
T ss_pred             CcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHH-HHHH
Confidence            2457999999999888765       35788999998876653111111111111111 111     12233455 8999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++..++... ... |..+++-++..++
T Consensus       192 a~~~~~~~~-~~~-~~~~ni~~~~~~s  216 (287)
T TIGR01214       192 VIAALLQRL-ARA-RGVYHLANSGQCS  216 (287)
T ss_pred             HHHHHHhhc-cCC-CCeEEEECCCCcC
Confidence            888877532 122 3456665444433

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.57  E-value=8.9e-13  Score=99.87  Aligned_cols=218  Identities=14%  Similarity=0.137  Sum_probs=149.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .-.+|+|-||-+.+|.+|+..|-.+++.|.-++-.+..-.             .-.+.+..|-+ =.|+-+.+++++-+.
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------------d~sI~V~~~~s-wtEQe~~v~~~vg~s   67 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------------DSSILVDGNKS-WTEQEQSVLEQVGSS   67 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------------cceEEecCCcc-hhHHHHHHHHHHHHh
Confidence            4568999999999999999999999999988887643211             12233444433 234445555555443


Q ss_pred             c--CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           98 F--GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        98 ~--g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      .  .++|.+++.||.+.-...-...-....+-++...+.......+....+++.   +|.+-..+.-.+..  +.|+...
T Consensus        68 L~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~--gTPgMIG  142 (236)
T KOG4022|consen   68 LQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALG--GTPGMIG  142 (236)
T ss_pred             hcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccC--CCCcccc
Confidence            3  479999999987632211111112333446666677666666666666643   44554444444444  6789999


Q ss_pred             ChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          176 YASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      |+++|+|++.++++++.+-.  +.|--+..|.|=-.+|||.++.+++..+.    .+.|       -..+++..+-...+
T Consensus       143 YGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs----sWTP-------L~fi~e~flkWtt~  211 (236)
T KOG4022|consen  143 YGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS----SWTP-------LSFISEHFLKWTTE  211 (236)
T ss_pred             hhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc----Cccc-------HHHHHHHHHHHhcc
Confidence            99999999999999998875  56788899999999999998776543322    2233       34888888777877


Q ss_pred             CCCcccccEEEe
Q 023555          254 SSEYVSGNIFIV  265 (280)
Q Consensus       254 ~~~~i~G~~i~v  265 (280)
                      ..+.-+|.-+.+
T Consensus       212 ~~RPssGsLlqi  223 (236)
T KOG4022|consen  212 TSRPSSGSLLQI  223 (236)
T ss_pred             CCCCCCCceEEE
Confidence            778888887765

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.57  E-value=2.3e-13  Score=118.76  Aligned_cols=205  Identities=13%  Similarity=0.114  Sum_probs=131.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +++||||+|.||++++++|.++|++|.+++|+.++....    ..     ..+.++.+|++ +.+++.++++       +
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~-----~~v~~v~~Dl~-d~~~l~~al~-------g   64 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE-----WGAELVYGDLS-LPETLPPSFK-------G   64 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh-----cCCEEEECCCC-CHHHHHHHHC-------C
Confidence            699999999999999999999999999999987543321    11     14677899998 6666655554       6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|++||.++.. ..         +.....++|+.++.++++++.    + .+-.++|++||.....    .+...|..+|
T Consensus        65 ~d~Vi~~~~~~-~~---------~~~~~~~~~~~~~~~l~~aa~----~-~gvkr~I~~Ss~~~~~----~~~~~~~~~K  125 (317)
T CHL00194         65 VTAIIDASTSR-PS---------DLYNAKQIDWDGKLALIEAAK----A-AKIKRFIFFSILNAEQ----YPYIPLMKLK  125 (317)
T ss_pred             CCEEEECCCCC-CC---------CccchhhhhHHHHHHHHHHHH----H-cCCCEEEEeccccccc----cCCChHHHHH
Confidence            89999987532 10         112356678888888888762    2 2245999999864321    1234578888


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhh---hh-hcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN---VA-SRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~---~~-~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      ...+.+.+       ..++.+..+.|+.+...+..... .+....   +. ....+ ..+...+ |+|+++..++.... 
T Consensus       126 ~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~i~v~-Dva~~~~~~l~~~~-  194 (317)
T CHL00194        126 SDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYA-IPILEKQPIWITNESTP-ISYIDTQ-DAAKFCLKSLSLPE-  194 (317)
T ss_pred             HHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhh-hhhccCCceEecCCCCc-cCccCHH-HHHHHHHHHhcCcc-
Confidence            88776543       24788899999865332211100 000000   00 00011 1234446 99998877775322 


Q ss_pred             cccccEEEeCCcccCCC
Q 023555          257 YVSGNIFIVDSGATLPG  273 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~~~  273 (280)
                       ..|+++++-|+..++.
T Consensus       195 -~~~~~~ni~g~~~~s~  210 (317)
T CHL00194        195 -TKNKTFPLVGPKSWNS  210 (317)
T ss_pred             -ccCcEEEecCCCccCH
Confidence             2478999988876654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.57  E-value=2.8e-13  Score=117.57  Aligned_cols=212  Identities=17%  Similarity=0.231  Sum_probs=139.7

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      ||||||+|.||++++++|.++|++|+.++|.........          ..+.++.+|++ +.+...+..+       ..
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~-~~~~~~~~~~-------~~   64 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLT-DRDLVDELAK-------GV   64 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeeccc-chHHHHHHHh-------cC
Confidence            999999999999999999999999999999765543321          24667888887 4433333333       33


Q ss_pred             -cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--C-------CC
Q 023555          102 -DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--Q-------LP  171 (280)
Q Consensus       102 -d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--~-------~~  171 (280)
                       |.+||+|+.......  ..+  +....+++|+.++.++++++..     .+..++|+.||.+.....  .       .+
T Consensus        65 ~d~vih~aa~~~~~~~--~~~--~~~~~~~~nv~gt~~ll~aa~~-----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~  135 (314)
T COG0451          65 PDAVIHLAAQSSVPDS--NAS--DPAEFLDVNVDGTLNLLEAARA-----AGVKRFVFASSVSVVYGDPPPLPIDEDLGP  135 (314)
T ss_pred             CCEEEEccccCchhhh--hhh--CHHHHHHHHHHHHHHHHHHHHH-----cCCCeEEEeCCCceECCCCCCCCcccccCC
Confidence             999999987632211  111  3456889999999999998833     235689997664533311  0       01


Q ss_pred             CCC--CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCC---C-------CC
Q 023555          172 GGV--AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYP---L-------RD  235 (280)
Q Consensus       172 ~~~--~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p---~-------~~  235 (280)
                      ..+  .|+.+|.+.+.+++..+.   ..|+.+..+.|+.+..+......+    ........ +..|   .       ..
T Consensus       136 ~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  211 (314)
T COG0451         136 PRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLL-KGEPIIVIGGDGSQTRD  211 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHH-hCCCcceEeCCCceeEe
Confidence            122  499999999999999998   458999999999777665433211    11111111 1122   1       12


Q ss_pred             CCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      +...+ |++.++.+++......    .+++.++.
T Consensus       212 ~i~v~-D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         212 FVYVD-DVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             eEeHH-HHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            45556 8998888887644332    77776664

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.54  E-value=5.8e-13  Score=120.66  Aligned_cols=221  Identities=13%  Similarity=0.061  Sum_probs=139.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -+.++||||||+|.||++++++|.++|++|++++|...........+.   + ..++.++..|+. +.     .+     
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~-~~~~~~~~~Di~-~~-----~~-----  182 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---G-NPRFELIRHDVV-EP-----IL-----  182 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---c-CCceEEEECccc-cc-----cc-----
Confidence            345689999999999999999999999999999986332111111111   1 124667778876 21     11     


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------  168 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------  168 (280)
                        .++|+|||.|+...+...  .   .+-...++.|+.++.++++++..    .  +.++|++||...+...        
T Consensus       183 --~~~D~ViHlAa~~~~~~~--~---~~p~~~~~~Nv~gT~nLleaa~~----~--g~r~V~~SS~~VYg~~~~~p~~E~  249 (436)
T PLN02166        183 --LEVDQIYHLACPASPVHY--K---YNPVKTIKTNVMGTLNMLGLAKR----V--GARFLLTSTSEVYGDPLEHPQKET  249 (436)
T ss_pred             --cCCCEEEECceeccchhh--c---cCHHHHHHHHHHHHHHHHHHHHH----h--CCEEEEECcHHHhCCCCCCCCCcc
Confidence              268999999986432111  1   12356789999999999988732    2  2489999996543210        


Q ss_pred             ------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC---ccchhhhhhhhhcC-CC------
Q 023555          169 ------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG---LMKKDWLNNVASRT-YP------  232 (280)
Q Consensus       169 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~---~~~~~~~~~~~~~~-~p------  232 (280)
                            +......|+.+|.+.+.+++.++..+   ++++..+.|+.+..+....   ..-..+........ ..      
T Consensus       250 ~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~  326 (436)
T PLN02166        250 YWGNVNPIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGK  326 (436)
T ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCC
Confidence                  11123569999999999999887654   7888888888776653210   00011222222211 11      


Q ss_pred             -CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          233 -LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       233 -~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                       .+.+...+ |+++++..++...   ..| ++++-+|..++.
T Consensus       327 ~~rdfi~V~-Dva~ai~~~~~~~---~~g-iyNIgs~~~~Si  363 (436)
T PLN02166        327 QTRSFQYVS-DLVDGLVALMEGE---HVG-PFNLGNPGEFTM  363 (436)
T ss_pred             eEEeeEEHH-HHHHHHHHHHhcC---CCc-eEEeCCCCcEeH
Confidence             23356666 8999887777432   234 788876655443

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.50  E-value=9.4e-13  Score=110.73  Aligned_cols=161  Identities=18%  Similarity=0.220  Sum_probs=122.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++||||||+|-||.+++.+|.++|+.|+++|.-........+.+++..+.+..+.+...|+. |.+.+++++++.    
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~-D~~~L~kvF~~~----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLN-DAEALEKLFSEV----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccC-CHHHHHHHHhhc----
Confidence            689999999999999999999999999999986443333344444444444568999999999 778888888775    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------C
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------Q  169 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~  169 (280)
                       ++|.++|-|+.-...     .+.+........|+.|+++++..+    ++.+ -..+|+.||...+...         +
T Consensus        77 -~fd~V~Hfa~~~~vg-----eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~-~~~~V~sssatvYG~p~~ip~te~~~  145 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVG-----ESMENPLSYYHNNIAGTLNLLEVM----KAHN-VKALVFSSSATVYGLPTKVPITEEDP  145 (343)
T ss_pred             -CCceEEeehhhhccc-----hhhhCchhheehhhhhHHHHHHHH----HHcC-CceEEEecceeeecCcceeeccCcCC
Confidence             699999999875332     233444778899999999888765    4444 5689999987654311         1


Q ss_pred             CC-CCCCChhhHHHHHHHHHHHHHHhC
Q 023555          170 LP-GGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       170 ~~-~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                      .. +...|+.+|.+++..++.....+.
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            12 457899999999999998887764

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.50  E-value=1.3e-12  Score=113.08  Aligned_cols=147  Identities=18%  Similarity=0.125  Sum_probs=103.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|.||+++++.|.++| +|+.++|...                    .+..|++ +.+.++++++..     +
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------------~~~~Dl~-d~~~~~~~~~~~-----~   54 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------------DYCGDFS-NPEGVAETVRKI-----R   54 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------------cccCCCC-CHHHHHHHHHhc-----C
Confidence            69999999999999999999999 7888887521                    1356888 667777766642     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CCC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QLP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~~  171 (280)
                      +|++||+|+......     ..++-+..+.+|+.++.++++++.    +.  +.++|++||...+...         +..
T Consensus        55 ~D~Vih~Aa~~~~~~-----~~~~~~~~~~~N~~~~~~l~~aa~----~~--g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~  123 (299)
T PRK09987         55 PDVIVNAAAHTAVDK-----AESEPEFAQLLNATSVEAIAKAAN----EV--GAWVVHYSTDYVFPGTGDIPWQETDATA  123 (299)
T ss_pred             CCEEEECCccCCcch-----hhcCHHHHHHHHHHHHHHHHHHHH----Hc--CCeEEEEccceEECCCCCCCcCCCCCCC
Confidence            899999998763221     112234567899999999998873    22  3589999986543211         111


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE  212 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~  212 (280)
                      +...|+.+|.+.+.+++.+..       +...++|+.+..+
T Consensus       124 P~~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        124 PLNVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             CCCHHHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence            335799999999998876543       2366666666554

>PLN02996 fatty acyl-CoA reductase

Probab=99.46  E-value=8.3e-12  Score=114.81  Aligned_cols=228  Identities=19%  Similarity=0.210  Sum_probs=140.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC---eEEEEecChh---HHHHHHHHH---------HhhcCC------CcceE
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVD---RLKSLCDEI---------NKQSGS------SVRAM   74 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~---~v~l~~r~~~---~~~~~~~~~---------~~~~~~------~~~~~   74 (280)
                      -++||+++||||||.||..+++.|++.+.   +|+++.|...   ..+.+..++         .+..+.      ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            37899999999999999999999998654   5788888542   111111111         111110      13688


Q ss_pred             EEEeccCC------CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 023555           75 AVELDVSA------NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMR  148 (280)
Q Consensus        75 ~~~~D~~~------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  148 (280)
                      ++.+|++.      +.+..+.+++       .+|+|||+|+....     .   ++.+..+++|+.|+..+++++..   
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~---~~~~~~~~~Nv~gt~~ll~~a~~---  149 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----D---ERYDVALGINTLGALNVLNFAKK---  149 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----c---CCHHHHHHHHHHHHHHHHHHHHh---
Confidence            99999972      1122233332       68999999987532     1   23566889999999999887732   


Q ss_pred             hcCCCCeEEEEeccccccCCC-------CC--------------------------------------------------
Q 023555          149 DANQEGSVINISSIAATSRGQ-------LP--------------------------------------------------  171 (280)
Q Consensus       149 ~~~~~g~vv~vsS~~~~~~~~-------~~--------------------------------------------------  171 (280)
                       ...-.++|++||........       ++                                                  
T Consensus       150 -~~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        150 -CVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             -cCCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence             11235899999876542100       00                                                  


Q ss_pred             ---CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--------hhhhhhhhhcCC--------C
Q 023555          172 ---GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--------KDWLNNVASRTY--------P  232 (280)
Q Consensus       172 ---~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~--------p  232 (280)
                         ....|+.||++.+.+++..+     .++.+..++|+.|..+.......        ............        .
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~  303 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNS  303 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCe
Confidence               11359999999999997543     27999999999987765433210        011110111101        1


Q ss_pred             CCCCCCChHHHHHHHHHhhcCCC-CcccccEEEeCCc
Q 023555          233 LRDFGTTDPALTSLVRYLVHDSS-EYVSGNIFIVDSG  268 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~~~-~~i~G~~i~vdgG  268 (280)
                      ...+...+ ++++++..++.... ..-.++++++-+|
T Consensus       304 ~~D~v~Vd-dvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        304 VLDVIPAD-MVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ecceeccc-HHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            24456666 89988766654321 1124678888777

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.1e-11  Score=118.42  Aligned_cols=223  Identities=17%  Similarity=0.203  Sum_probs=136.7

Q ss_pred             EEEEecCCChhHHHHHHHHH--HhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHH-HHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAA-IENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~--~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~   97 (280)
                      ++|||||+|.||+++++.|+  +.|++|++++|+... .... .+....+ ..++.++.+|+++.... ....++.+   
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~-~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLE-ALAAYWG-ADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHH-HHHHhcC-CCcEEEEecccCCccCCcCHHHHHHh---
Confidence            69999999999999999999  589999999996432 1111 1111111 12577889999842100 01122222   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC--------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ--------  169 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~--------  169 (280)
                       .++|++||+|+.....     .+   .....++|+.++..+++++.    +. +..++|++||...+....        
T Consensus        76 -~~~D~Vih~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a~----~~-~~~~~v~~SS~~v~g~~~~~~~e~~~  141 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT-----AD---EEAQRAANVDGTRNVVELAE----RL-QAATFHHVSSIAVAGDYEGVFREDDF  141 (657)
T ss_pred             -cCCCEEEECceeecCC-----CC---HHHHHHHHhHHHHHHHHHHH----hc-CCCeEEEEeccccccCccCccccccc
Confidence             4899999999875221     12   24567889999988888762    22 246999999976542110        


Q ss_pred             ---CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC----ccch----hhhhhhh--hcCCCC---
Q 023555          170 ---LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG----LMKK----DWLNNVA--SRTYPL---  233 (280)
Q Consensus       170 ---~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~----~~~~----~~~~~~~--~~~~p~---  233 (280)
                         ......|+.+|...+.+++.      ..|+++..+.|+.+..+....    ....    .......  ....|.   
T Consensus       142 ~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (657)
T PRK07201        142 DEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGP  215 (657)
T ss_pred             hhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccC
Confidence               11235699999999988763      247999999999886643211    0000    0111110  001111   


Q ss_pred             ----CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          234 ----RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       234 ----~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                          ..+...+ ++++++..++..  ....|+.+++-++..++
T Consensus       216 ~~~~~~~v~vd-dva~ai~~~~~~--~~~~g~~~ni~~~~~~s  255 (657)
T PRK07201        216 DGGRTNIVPVD-YVADALDHLMHK--DGRDGQTFHLTDPKPQR  255 (657)
T ss_pred             CCCeeeeeeHH-HHHHHHHHHhcC--cCCCCCEEEeCCCCCCc
Confidence                1123344 899988887753  34568899987765544

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.43  E-value=1.6e-11  Score=104.04  Aligned_cols=185  Identities=19%  Similarity=0.237  Sum_probs=144.6

Q ss_pred             CcEEEEecC-CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGA-SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~-~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ..+|||.|. +.-|++.+|..|-++|+-|+++..+.++.+....+-      ...+.....|.. +..++...+.++.+.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~------~~dI~~L~ld~~-~~~~~~~~l~~f~~~   75 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED------RPDIRPLWLDDS-DPSSIHASLSRFASL   75 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc------CCCCCCcccCCC-CCcchHHHHHHHHHH
Confidence            467899996 799999999999999999999999987766544332      224555666665 456666777666655


Q ss_pred             cC--------------CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEe-c
Q 023555           98 FG--------------RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINIS-S  161 (280)
Q Consensus        98 ~g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vs-S  161 (280)
                      ..              .+..+|..+...-+.++++.++.+.|.+.++.|+..++..+|.++|+|+.+. .+.+||.+. |
T Consensus        76 L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Ps  155 (299)
T PF08643_consen   76 LSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPS  155 (299)
T ss_pred             hcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCc
Confidence            44              3556777666554678899999999999999999999999999999998732 345666665 4


Q ss_pred             cccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc
Q 023555          162 IAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE  212 (280)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~  212 (280)
                      ..+..  ..|..+.-.+..+++.+|++.|.+|+.+.||.|..+..|.++-.
T Consensus       156 i~ssl--~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  156 ISSSL--NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hhhcc--CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            44433  45778888999999999999999999999999999999887644

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK05865 hypothetical protein; Provisional

Probab=99.42  E-value=8.1e-12  Score=120.01  Aligned_cols=182  Identities=20%  Similarity=0.255  Sum_probs=122.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +++||||+|+||++++++|.++|++|++++|+....      .      ...+.++.+|++ +.+++.++++       +
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~------~~~v~~v~gDL~-D~~~l~~al~-------~   61 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W------PSSADFIAADIR-DATAVESAMT-------G   61 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c------ccCceEEEeeCC-CHHHHHHHHh-------C
Confidence            699999999999999999999999999999974321      1      014667899999 6666666654       5


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|++||+|+...+              .+++|+.++.++++++    ++.+ .+++|++||..                |
T Consensus        62 vD~VVHlAa~~~~--------------~~~vNv~GT~nLLeAa----~~~g-vkr~V~iSS~~----------------K  106 (854)
T PRK05865         62 ADVVAHCAWVRGR--------------NDHINIDGTANVLKAM----AETG-TGRIVFTSSGH----------------Q  106 (854)
T ss_pred             CCEEEECCCcccc--------------hHHHHHHHHHHHHHHH----HHcC-CCeEEEECCcH----------------H
Confidence            8999999975311              3678999988777665    3332 56999999842                7


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhh-cCCCCC------CCCCChHHHHHHHHHhhcC
Q 023555          181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS-RTYPLR------DFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~p~~------~~~~~~~~va~~~~~l~s~  253 (280)
                      .+.+.+++    +   .++.+..+.|+.+..+-..     .+...... ...+.+      .+...+ |++.++..++..
T Consensus       107 ~aaE~ll~----~---~gl~~vILRp~~VYGP~~~-----~~i~~ll~~~v~~~G~~~~~~dfIhVd-DVA~Ai~~aL~~  173 (854)
T PRK05865        107 PRVEQMLA----D---CGLEWVAVRCALIFGRNVD-----NWVQRLFALPVLPAGYADRVVQVVHSD-DAQRLLVRALLD  173 (854)
T ss_pred             HHHHHHHH----H---cCCCEEEEEeceEeCCChH-----HHHHHHhcCceeccCCCCceEeeeeHH-HHHHHHHHHHhC
Confidence            77776553    2   3789999999988765321     11111110 001111      345566 999988777642


Q ss_pred             CCCcccccEEEeCCcccCC
Q 023555          254 SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~  272 (280)
                      .  ...|..+++-+|..++
T Consensus       174 ~--~~~ggvyNIgsg~~~S  190 (854)
T PRK05865        174 T--VIDSGPVNLAAPGELT  190 (854)
T ss_pred             C--CcCCCeEEEECCCccc
Confidence            2  1234578887765543

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.41  E-value=6.1e-12  Score=106.03  Aligned_cols=170  Identities=18%  Similarity=0.204  Sum_probs=97.3

Q ss_pred             EecCCChhHHHHHHHHHHhCC--eEEEEecChhH---HHHHHHHHHhhc-------CCCcceEEEEeccCCCHHHH-HHH
Q 023555           24 VTGASSGLGREFCLDLAKAGC--RIVAAARRVDR---LKSLCDEINKQS-------GSSVRAMAVELDVSANGAAI-ENS   90 (280)
Q Consensus        24 ItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~-~~~   90 (280)
                      ||||||.||.++.++|++++.  +|+++.|....   .+.+.+.+.+..       ....++.++.+|++...-.+ +..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  89999997532   222222211110       01348999999999422111 112


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC-
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ-  169 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~-  169 (280)
                      .+++.+   .+|+|||+|+......        .+.+..++|+.|+..+++.+.     ..+..+++++||........ 
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~-----~~~~~~~~~iSTa~v~~~~~~  144 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAA-----QGKRKRFHYISTAYVAGSRPG  144 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHT-----SSS---EEEEEEGGGTTS-TT
T ss_pred             hhcccc---ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHH-----hccCcceEEeccccccCCCCC
Confidence            222222   6899999998763322        234467899999999998872     22234999999932211100 


Q ss_pred             -----------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc
Q 023555          170 -----------------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE  212 (280)
Q Consensus       170 -----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~  212 (280)
                                       ......|..||...|.+++..+.+.   |+.+..++||.+-.+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVGD  201 (249)
T ss_dssp             T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-S
T ss_pred             cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCccccc
Confidence                             0123589999999999999988763   789999999988663

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.35  E-value=1.2e-10  Score=100.76  Aligned_cols=199  Identities=14%  Similarity=0.173  Sum_probs=114.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .+++|||||+|.||++++++|.++|++|+...+                           |+. +.+.+...++.     
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~---------------------------~~~-~~~~v~~~l~~-----   55 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG---------------------------RLE-NRASLEADIDA-----   55 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC---------------------------ccC-CHHHHHHHHHh-----
Confidence            367999999999999999999999999864321                           222 33334444432     


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc--cC---------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT--SR---------  167 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~--~~---------  167 (280)
                      .++|+|||+|+...... . +...++-...+++|+.++.++++++..    .+  -+.+++||...+  ..         
T Consensus        56 ~~~D~ViH~Aa~~~~~~-~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~----~g--v~~v~~sS~~vy~~~~~~p~~~~~~  127 (298)
T PLN02778         56 VKPTHVFNAAGVTGRPN-V-DWCESHKVETIRANVVGTLTLADVCRE----RG--LVLTNYATGCIFEYDDAHPLGSGIG  127 (298)
T ss_pred             cCCCEEEECCcccCCCC-c-hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC--CCEEEEecceEeCCCCCCCcccCCC
Confidence            26899999999763211 0 112234467899999999999998832    22  245555543211  10         


Q ss_pred             -----CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcC--CCC-CCCCCC
Q 023555          168 -----GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT--YPL-RDFGTT  239 (280)
Q Consensus       168 -----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~p~-~~~~~~  239 (280)
                           .+.+....|+.||.+.+.+++.++..   .++|+     ++...+-. . ....+........  ... ..+...
T Consensus       128 ~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~-~-~~~~fi~~~~~~~~~~~~~~s~~yv  197 (298)
T PLN02778        128 FKEEDTPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDL-S-NPRNFITKITRYEKVVNIPNSMTIL  197 (298)
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCccc-c-cHHHHHHHHHcCCCeeEcCCCCEEH
Confidence                 01112357999999999999886533   24444     22111100 0 0011222222111  111 235556


Q ss_pred             hHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       240 ~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      + |+++++..++...   ..| .+++-+|-.++.
T Consensus       198 ~-D~v~al~~~l~~~---~~g-~yNigs~~~iS~  226 (298)
T PLN02778        198 D-ELLPISIEMAKRN---LTG-IYNFTNPGVVSH  226 (298)
T ss_pred             H-HHHHHHHHHHhCC---CCC-eEEeCCCCcccH
Confidence            6 7888777776432   245 888866665543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.34  E-value=4.5e-11  Score=95.78  Aligned_cols=172  Identities=16%  Similarity=0.215  Sum_probs=114.4

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      |+|+||+|.+|+.+++.|.++|++|+++.|++++.++           ..++..+.+|+. +.+++.+.++       ++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----------~~~~~~~~~d~~-d~~~~~~al~-------~~   61 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----------SPGVEIIQGDLF-DPDSVKAALK-------GA   61 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----------CTTEEEEESCTT-CHHHHHHHHT-------TS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----------ccccccceeeeh-hhhhhhhhhh-------hc
Confidence            7999999999999999999999999999999987765           127888999998 6666666555       79


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC---------
Q 023555          102 DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG---------  172 (280)
Q Consensus       102 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~---------  172 (280)
                      |.+|+++|....         +             ...++.++..+++.+ ..++|++|+......  .+.         
T Consensus        62 d~vi~~~~~~~~---------~-------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~--~~~~~~~~~~~~  116 (183)
T PF13460_consen   62 DAVIHAAGPPPK---------D-------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRD--PPGLFSDEDKPI  116 (183)
T ss_dssp             SEEEECCHSTTT---------H-------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTT--CTSEEEGGTCGG
T ss_pred             chhhhhhhhhcc---------c-------------ccccccccccccccc-cccceeeeccccCCC--CCcccccccccc
Confidence            999999976411         1             334455555565544 669999999776542  122         


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ...|...|...+.+.       ...+++...++|+++..+.....   .....   ...........+ |+|.++..++
T Consensus       117 ~~~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~---~~~~~---~~~~~~~~i~~~-DvA~~~~~~l  181 (183)
T PF13460_consen  117 FPEYARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSY---RLIKE---GGPQGVNFISRE-DVAKAIVEAL  181 (183)
T ss_dssp             GHHHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSE---EEESS---TSTTSHCEEEHH-HHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcce---eEEec---cCCCCcCcCCHH-HHHHHHHHHh
Confidence            113455555444333       12489999999999876653211   11000   000111234455 8998887765

...

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=5.6e-11  Score=108.70  Aligned_cols=161  Identities=20%  Similarity=0.230  Sum_probs=116.8

Q ss_pred             CcEEE----EecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           19 NKVVM----VTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        19 ~k~vl----ItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |..+|    |+||++|+|.++++.|...|+.|+.+.+...+...                                    
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------------------------------------   77 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------------------------------------   77 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc------------------------------------
Confidence            44555    88889999999999999999999988765431100                                    


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                       ....+++.+++-+.-.        .+.+++.        +.+.+++..++.|.+   .|+||+++|.....     ...
T Consensus        78 -~~~~~~~~~~~d~~~~--------~~~~~l~--------~~~~~~~~~l~~l~~---~griv~i~s~~~~~-----~~~  132 (450)
T PRK08261         78 -GWGDRFGALVFDATGI--------TDPADLK--------ALYEFFHPVLRSLAP---CGRVVVLGRPPEAA-----ADP  132 (450)
T ss_pred             -CcCCcccEEEEECCCC--------CCHHHHH--------HHHHHHHHHHHhccC---CCEEEEEccccccC-----Cch
Confidence             0001444444333211        1123322        445667777777743   58999999876532     334


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|+++.+|+|++++|+ ++++++|.|.|+.                            ..++ ++++.+.|++++.
T Consensus       133 ~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~----------------------------~~~~-~~~~~~~~l~s~~  182 (450)
T PRK08261        133 AAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP----------------------------GAEA-GLESTLRFFLSPR  182 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC----------------------------CCHH-HHHHHHHHhcCCc
Confidence            69999999999999999999 7899999998874                            1233 8889999999999


Q ss_pred             CCcccccEEEeCCccc
Q 023555          255 SEYVSGNIFIVDSGAT  270 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~  270 (280)
                      +.+++|+.+.++++..
T Consensus       183 ~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        183 SAYVSGQVVRVGAADA  198 (450)
T ss_pred             cCCccCcEEEecCCcc
Confidence            9999999999999875

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.33  E-value=4.1e-11  Score=104.11  Aligned_cols=234  Identities=18%  Similarity=0.167  Sum_probs=146.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++.++|||||+|.+|++++++|.+.+  ..|.++|.......-..++...   ...++.++.+|+. +..++.+.+.  
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~---~~~~v~~~~~D~~-~~~~i~~a~~--   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF---RSGRVTVILGDLL-DANSISNAFQ--   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc---cCCceeEEecchh-hhhhhhhhcc--
Confidence            467899999999999999999999999  6799998876421111111110   1347888889998 5555555544  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           ++ .+||+|....+.     .-..+-+..+++|+.|+.+++.++.    + ..-.++|++||..-...+      
T Consensus        76 -----~~-~Vvh~aa~~~~~-----~~~~~~~~~~~vNV~gT~nvi~~c~----~-~~v~~lIYtSs~~Vvf~g~~~~n~  139 (361)
T KOG1430|consen   76 -----GA-VVVHCAASPVPD-----FVENDRDLAMRVNVNGTLNVIEACK----E-LGVKRLIYTSSAYVVFGGEPIING  139 (361)
T ss_pred             -----Cc-eEEEeccccCcc-----ccccchhhheeecchhHHHHHHHHH----H-hCCCEEEEecCceEEeCCeecccC
Confidence                 56 677776543221     1122456788999999998888872    2 235699999997644321      


Q ss_pred             ----CCC--CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcC---CCC------
Q 023555          169 ----QLP--GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT---YPL------  233 (280)
Q Consensus       169 ----~~~--~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~p~------  233 (280)
                          +.|  ....|+.||+--+.+++..+.   ..+....+++|-.|..|-.....+.-  .+.....   ...      
T Consensus       140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i--~~~~~~g~~~f~~g~~~~~  214 (361)
T KOG1430|consen  140 DESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKI--VEALKNGGFLFKIGDGENL  214 (361)
T ss_pred             CCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHH--HHHHHccCceEEeeccccc
Confidence                222  225899999999998887775   45789999999988877644332211  1111000   111      


Q ss_pred             CCCCCChH-HHHHHHHH-hhcCCCCcccccEEEeCCcccCCCCCCC
Q 023555          234 RDFGTTDP-ALTSLVRY-LVHDSSEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       234 ~~~~~~~~-~va~~~~~-l~s~~~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      -.+...+. ..|..+.. -+.+.+..++||.+.+..|.....-.||
T Consensus       215 ~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~  260 (361)
T KOG1430|consen  215 NDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFL  260 (361)
T ss_pred             cceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHH
Confidence            11111220 12222222 1223677899999999888776554443

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.30  E-value=3.1e-11  Score=103.75  Aligned_cols=198  Identities=16%  Similarity=0.171  Sum_probs=118.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++||||++|-||.++.+.|.++|++|+.++|.                        .+|++ +.+.+.+++++.     +
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~-d~~~~~~~~~~~-----~   51 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLT-DPEAVAKLLEAF-----K   51 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TT-SHHHHHHHHHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCC-CHHHHHHHHHHh-----C
Confidence            69999999999999999999999999999886                        56777 667777777765     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CCC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QLP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~~  171 (280)
                      +|+|||+|+...+.     .-.++-+..+.+|+.++..+.+.+.    + . +.++|++||..-+.+.         ...
T Consensus        52 pd~Vin~aa~~~~~-----~ce~~p~~a~~iN~~~~~~la~~~~----~-~-~~~li~~STd~VFdG~~~~~y~E~d~~~  120 (286)
T PF04321_consen   52 PDVVINCAAYTNVD-----ACEKNPEEAYAINVDATKNLAEACK----E-R-GARLIHISTDYVFDGDKGGPYTEDDPPN  120 (286)
T ss_dssp             -SEEEE------HH-----HHHHSHHHHHHHHTHHHHHHHHHHH----H-C-T-EEEEEEEGGGS-SSTSSSB-TTS---
T ss_pred             CCeEeccceeecHH-----hhhhChhhhHHHhhHHHHHHHHHHH----H-c-CCcEEEeeccEEEcCCcccccccCCCCC
Confidence            99999999875221     1223455688999999999999872    2 2 5799999997544321         111


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCC------CCCCCCCChHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY------PLRDFGTTDPALTS  245 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~~~va~  245 (280)
                      +...|+-+|...|..++....       +...++++++-.+-..++.  .++.+......      ...+..+.-+|+|.
T Consensus       121 P~~~YG~~K~~~E~~v~~~~~-------~~~IlR~~~~~g~~~~~~~--~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~  191 (286)
T PF04321_consen  121 PLNVYGRSKLEGEQAVRAACP-------NALILRTSWVYGPSGRNFL--RWLLRRLRQGEPIKLFDDQYRSPTYVDDLAR  191 (286)
T ss_dssp             -SSHHHHHHHHHHHHHHHH-S-------SEEEEEE-SEESSSSSSHH--HHHHHHHHCTSEEEEESSCEE--EEHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhcC-------CEEEEecceecccCCCchh--hhHHHHHhcCCeeEeeCCceeCCEEHHHHHH
Confidence            346899999999988777322       5567778877665222211  11111111111      11111222338999


Q ss_pred             HHHHhhcCCCC--cccccEEEeCCcc
Q 023555          246 LVRYLVHDSSE--YVSGNIFIVDSGA  269 (280)
Q Consensus       246 ~~~~l~s~~~~--~i~G~~i~vdgG~  269 (280)
                      .+..|+.....  ...| ++.+.|.-
T Consensus       192 ~i~~l~~~~~~~~~~~G-iyh~~~~~  216 (286)
T PF04321_consen  192 VILELIEKNLSGASPWG-IYHLSGPE  216 (286)
T ss_dssp             HHHHHHHHHHH-GGG-E-EEE---BS
T ss_pred             HHHHHHHhcccccccce-eEEEecCc
Confidence            88888764321  1224 56655543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=1.7e-10  Score=97.01  Aligned_cols=183  Identities=19%  Similarity=0.227  Sum_probs=123.8

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      +||||++|-+|.++++.|. .+++|+.++|..                        +|++ +.+.+.+++.+.     ++
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Dit-d~~~v~~~i~~~-----~P   51 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDIT-DPDAVLEVIRET-----RP   51 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------cccc-ChHHHHHHHHhh-----CC
Confidence            9999999999999999999 778999998853                        7888 678888888876     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------CCC
Q 023555          102 DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------LPG  172 (280)
Q Consensus       102 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------~~~  172 (280)
                      |+|||+|++......     +.+-+.-+.+|..++.++.+++     + .-+..+|++|+-+-+.+..         ..+
T Consensus        52 DvVIn~AAyt~vD~a-----E~~~e~A~~vNa~~~~~lA~aa-----~-~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P  120 (281)
T COG1091          52 DVVINAAAYTAVDKA-----ESEPELAFAVNATGAENLARAA-----A-EVGARLVHISTDYVFDGEKGGPYKETDTPNP  120 (281)
T ss_pred             CEEEECccccccccc-----cCCHHHHHHhHHHHHHHHHHHH-----H-HhCCeEEEeecceEecCCCCCCCCCCCCCCC
Confidence            999999998744322     2234668999999999999988     2 2367999999866543221         124


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC----CCC--CCChHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL----RDF--GTTDPALTSL  246 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~----~~~--~~~~~~va~~  246 (280)
                      ...|+.||.+-+..++....       +...|...++...-..++. +.+ .+.....-++    ..+  .+.-.++|.+
T Consensus       121 ~nvYG~sKl~GE~~v~~~~~-------~~~I~Rtswv~g~~g~nFv-~tm-l~la~~~~~l~vv~Dq~gsPt~~~dlA~~  191 (281)
T COG1091         121 LNVYGRSKLAGEEAVRAAGP-------RHLILRTSWVYGEYGNNFV-KTM-LRLAKEGKELKVVDDQYGSPTYTEDLADA  191 (281)
T ss_pred             hhhhhHHHHHHHHHHHHhCC-------CEEEEEeeeeecCCCCCHH-HHH-HHHhhcCCceEEECCeeeCCccHHHHHHH
Confidence            56999999999988877652       2234444555444332221 111 1111111111    111  2333489998


Q ss_pred             HHHhhcCCC
Q 023555          247 VRYLVHDSS  255 (280)
Q Consensus       247 ~~~l~s~~~  255 (280)
                      +..|+....
T Consensus       192 i~~ll~~~~  200 (281)
T COG1091         192 ILELLEKEK  200 (281)
T ss_pred             HHHHHhccc
Confidence            888776553

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.24  E-value=9.8e-10  Score=94.84  Aligned_cols=171  Identities=18%  Similarity=0.229  Sum_probs=116.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChh---HHHHHHHHHHh----hcCCCcceEEEEeccCC-----CHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVD---RLKSLCDEINK----QSGSSVRAMAVELDVSA-----NGAA   86 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~---~~~~~~~~~~~----~~~~~~~~~~~~~D~~~-----~~~~   86 (280)
                      +++++|||||.+|+.+..+|..+- ++|++.-|-..   ..+.+.+.++.    ..-...++..+..|++.     +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999998764 48887776432   22222222220    00123478888888872     2234


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      .+.+.+       .+|.||||++.....        ..+.+....|+.|+..+++.+     ...+...+.+|||++...
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v--------~pYs~L~~~NVlGT~evlrLa-----~~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV--------FPYSELRGANVLGTAEVLRLA-----ATGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc--------CcHHHhcCcchHhHHHHHHHH-----hcCCCceeEEEeeeeecc
Confidence            444444       699999999876332        224567788999999888876     233345699999977542


Q ss_pred             CC------------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc
Q 023555          167 RG------------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT  214 (280)
Q Consensus       167 ~~------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~  214 (280)
                      ..                  .......|+-||.+.+-+++....    .|+++..+.||++-.+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccCc
Confidence            11                  001236899999999988776554    489999999999876654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.21  E-value=3.4e-09  Score=109.44  Aligned_cols=232  Identities=16%  Similarity=0.147  Sum_probs=138.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhC----CeEEEEecChhHHH---HHHHHHHhhc----CCCcceEEEEeccCCCHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAG----CRIVAAARRVDRLK---SLCDEINKQS----GSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G----~~v~l~~r~~~~~~---~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~   86 (280)
                      ..++|+|||++|.||.++++.|+++|    .+|+.+.|+.....   .+.+......    ....++.++.+|+++..-.
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            46899999999999999999999987    67888888743322   2211111100    0012677889998731100


Q ss_pred             -HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc
Q 023555           87 -IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT  165 (280)
Q Consensus        87 -~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~  165 (280)
                       -....+++.   ..+|++||+|+....     ...   +......|+.|+..+++.+.    + .+..+++++||....
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~----~-~~~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCA----E-GKAKQFSFVSSTSAL 1113 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHH----h-CCCceEEEEeCeeec
Confidence             011222222   379999999987521     122   33345679999999988763    2 224589999996543


Q ss_pred             cCC---------------CC-----------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-
Q 023555          166 SRG---------------QL-----------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-  218 (280)
Q Consensus       166 ~~~---------------~~-----------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-  218 (280)
                      ...               ..           .....|+.||.+.+.+++..+.    .|+.+..++||.+..+...... 
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~ 1189 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATN 1189 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCC
Confidence            110               00           0124699999999998887543    4899999999998765322221 


Q ss_pred             chhhhhhhhh-----cCCCC----CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          219 KKDWLNNVAS-----RTYPL----RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       219 ~~~~~~~~~~-----~~~p~----~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ..+++.....     ...|.    ..+...+ ++++++..++........+.++.+.++..
T Consensus      1190 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vd-dva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1190 TDDFLLRMLKGCIQLGLIPNINNTVNMVPVD-HVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             chhHHHHHHHHHHHhCCcCCCCCccccccHH-HHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence            1222222211     11222    2234444 89998888765332223345666665543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.20  E-value=1.5e-09  Score=101.36  Aligned_cols=131  Identities=16%  Similarity=0.255  Sum_probs=87.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC---eEEEEecChh--H-HHHHHHH---------HHhhcCC------CcceE
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVD--R-LKSLCDE---------INKQSGS------SVRAM   74 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~---~v~l~~r~~~--~-~~~~~~~---------~~~~~~~------~~~~~   74 (280)
                      -+++|+|+||||||.||..+++.|++.+.   +|+++.|...  . .+.+.++         +.+..+.      ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            36899999999999999999999998764   5788888532  1 2222112         2222221      24788


Q ss_pred             EEEeccCCC-----HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 023555           75 AVELDVSAN-----GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRD  149 (280)
Q Consensus        75 ~~~~D~~~~-----~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  149 (280)
                      .+..|+++.     .+..+.+.+       .+|+|||+|+....     +   ++.+..+++|+.++..+++.+..    
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~---~~~~~a~~vNV~GT~nLLelA~~----  256 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----D---ERYDVAIDINTRGPCHLMSFAKK----  256 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----c---cCHHHHHHHHHHHHHHHHHHHHH----
Confidence            899999842     122232222       69999999987531     1   34567889999999999887632    


Q ss_pred             cCCCCeEEEEeccccc
Q 023555          150 ANQEGSVINISSIAAT  165 (280)
Q Consensus       150 ~~~~g~vv~vsS~~~~  165 (280)
                      .+...++|++||.+..
T Consensus       257 ~~~lk~fV~vSTayVy  272 (605)
T PLN02503        257 CKKLKLFLQVSTAYVN  272 (605)
T ss_pred             cCCCCeEEEccCceee
Confidence            1223579999986543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.19  E-value=2e-09  Score=92.47  Aligned_cols=213  Identities=16%  Similarity=0.121  Sum_probs=117.0

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      +|||||+|.||.++++.|+++|++|++++|+.+.......           ..  ..|.. .        ....+.+.++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~--~~~~~-~--------~~~~~~~~~~   58 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EG--YKPWA-P--------LAESEALEGA   58 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------ee--eeccc-c--------cchhhhcCCC
Confidence            6899999999999999999999999999998765332110           00  11111 1        1112234579


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEeccccccCC---CCC------
Q 023555          102 DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINISSIAATSRG---QLP------  171 (280)
Q Consensus       102 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vsS~~~~~~~---~~~------  171 (280)
                      |+|||+|+.....   .....+.....+++|+.++..+++++.    +.+. ...+|+.|+...+...   +..      
T Consensus        59 D~Vvh~a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~  131 (292)
T TIGR01777        59 DAVINLAGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIA----AAEQKPKVFISASAVGYYGTSEDRVFTEEDSPA  131 (292)
T ss_pred             CEEEECCCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHH----hcCCCceEEEEeeeEEEeCCCCCCCcCcccCCC
Confidence            9999999864221   123445566788999999888887762    3221 1234444443222110   110      


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch--hhhhhh----hhcCCCCCCCCCChHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK--DWLNNV----ASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~--~~~~~~----~~~~~p~~~~~~~~~~va~  245 (280)
                      ....|+..+...+...+    .+...++.+..+.|+.+..+... ....  ......    .........+...+ |+++
T Consensus       132 ~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~-Dva~  205 (292)
T TIGR01777       132 GDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLGGPLGSGRQWFSWIHIE-DLVQ  205 (292)
T ss_pred             CCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcccccCCCCcccccEeHH-HHHH
Confidence            11112222333333222    22335799999999998766321 1110  000000    00001123455666 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++..++....  ..| .+++-++..++
T Consensus       206 ~i~~~l~~~~--~~g-~~~~~~~~~~s  229 (292)
T TIGR01777       206 LILFALENAS--ISG-PVNATAPEPVR  229 (292)
T ss_pred             HHHHHhcCcc--cCC-ceEecCCCccC
Confidence            9988885422  234 56666655544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.14  E-value=7e-09  Score=99.47  Aligned_cols=145  Identities=14%  Similarity=0.138  Sum_probs=96.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ..+++|||||+|.||+++++.|.++|++|...                           ..|++ +.+.+.+.++..   
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~-d~~~v~~~i~~~---  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLE-DRSSLLADIRNV---  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccc-cHHHHHHHHHhh---
Confidence            34579999999999999999999999887311                           12345 455565555543   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC---------C
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR---------G  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~---------~  168 (280)
                        ++|+|||+|+......  .+...++-...+++|+.++.++++++..    .  +.++|++||...+..         .
T Consensus       428 --~pd~Vih~Aa~~~~~~--~~~~~~~~~~~~~~N~~gt~~l~~a~~~----~--g~~~v~~Ss~~v~~~~~~~~~~~~~  497 (668)
T PLN02260        428 --KPTHVFNAAGVTGRPN--VDWCESHKVETIRANVVGTLTLADVCRE----N--GLLMMNFATGCIFEYDAKHPEGSGI  497 (668)
T ss_pred             --CCCEEEECCcccCCCC--CChHHhCHHHHHHHHhHHHHHHHHHHHH----c--CCeEEEEcccceecCCcccccccCC
Confidence              7999999998753211  1222345567889999999999998832    2  235666665332110         0


Q ss_pred             -------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeec
Q 023555          169 -------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICP  206 (280)
Q Consensus       169 -------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~p  206 (280)
                             +.+....|+.||.+.+.+++.+...   ..+|+..+..
T Consensus       498 p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~~  539 (668)
T PLN02260        498 GFKEEDKPNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPIS  539 (668)
T ss_pred             CCCcCCCCCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEecc
Confidence                   1122368999999999999876432   3566666553

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.13  E-value=1.9e-10  Score=95.19  Aligned_cols=102  Identities=14%  Similarity=0.136  Sum_probs=76.9

Q ss_pred             cEEEEecC-CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGA-SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~-~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .+=.||.. +||||+++|++|+++|++|+++++.. .       +...       ....+|++ +.++++++++.+.+.+
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~-~-------l~~~-------~~~~~Dv~-d~~s~~~l~~~v~~~~   78 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR-A-------LKPE-------PHPNLSIR-EIETTKDLLITLKELV   78 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh-h-------cccc-------cCCcceee-cHHHHHHHHHHHHHHc
Confidence            44456665 68999999999999999999988631 1       1000       01357888 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK  141 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  141 (280)
                      +++|++|||||+. ...++.+.+.++|++++.   .+.+.+.+
T Consensus        79 g~iDiLVnnAgv~-d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        79 QEHDILIHSMAVS-DYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             CCCCEEEECCEec-cccchhhCCHHHHhhhcc---hhhhhccc
Confidence            9999999999975 456778889999997744   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN00016 RNA-binding protein; Provisional

Probab=99.13  E-value=6.1e-09  Score=93.15  Aligned_cols=207  Identities=16%  Similarity=0.208  Sum_probs=121.7

Q ss_pred             CCCCcEEEEe----cCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH-------HHHHhhcCCCcceEEEEeccCCCH
Q 023555           16 QLDNKVVMVT----GASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC-------DEINKQSGSSVRAMAVELDVSANG   84 (280)
Q Consensus        16 ~l~~k~vlIt----G~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~D~~~~~   84 (280)
                      ....++||||    ||+|.||+++++.|.++|++|++++|+........       .++..     ..+.++.+|+. + 
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-----~~v~~v~~D~~-d-  121 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS-----AGVKTVWGDPA-D-  121 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh-----cCceEEEecHH-H-
Confidence            3445789999    99999999999999999999999999875432211       11111     13567788776 2 


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc
Q 023555           85 AAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA  164 (280)
Q Consensus        85 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~  164 (280)
                        +.+++.     ..++|++||+++..          .+           ++..++++    +++.+ -.++|++||...
T Consensus       122 --~~~~~~-----~~~~d~Vi~~~~~~----------~~-----------~~~~ll~a----a~~~g-vkr~V~~SS~~v  168 (378)
T PLN00016        122 --VKSKVA-----GAGFDVVYDNNGKD----------LD-----------EVEPVADW----AKSPG-LKQFLFCSSAGV  168 (378)
T ss_pred             --HHhhhc-----cCCccEEEeCCCCC----------HH-----------HHHHHHHH----HHHcC-CCEEEEEccHhh
Confidence              333331     23799999986531          11           22233443    33332 469999999765


Q ss_pred             ccCCCC-CC-----CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhc-CCCC----
Q 023555          165 TSRGQL-PG-----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-TYPL----  233 (280)
Q Consensus       165 ~~~~~~-~~-----~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~p~----  233 (280)
                      +..... +.     ...+. +|...+.+.+       ..++.+..+.|+.+..+.........+....... ..+.    
T Consensus       169 yg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g  240 (378)
T PLN00016        169 YKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSG  240 (378)
T ss_pred             cCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCC
Confidence            431110 10     01122 7888776543       2478999999998877643221111111111111 1111    


Q ss_pred             ---CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          234 ---RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       234 ---~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                         ..+...+ |+++++..++...  ...|+++++-++..++.
T Consensus       241 ~~~~~~i~v~-Dva~ai~~~l~~~--~~~~~~yni~~~~~~s~  280 (378)
T PLN00016        241 IQLTQLGHVK-DLASMFALVVGNP--KAAGQIFNIVSDRAVTF  280 (378)
T ss_pred             CeeeceecHH-HHHHHHHHHhcCc--cccCCEEEecCCCccCH
Confidence               2244566 9999888877542  23578898887765543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.12  E-value=3e-09  Score=91.37  Aligned_cols=197  Identities=12%  Similarity=0.088  Sum_probs=113.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +++||||||.+|++++++|.++|++|.++.|++++...            ..+..+.+|+. +.+++..+++.. +.+..
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~d~~-d~~~l~~a~~~~-~~~~g   66 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG------------PNEKHVKFDWL-DEDTWDNPFSSD-DGMEP   66 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC------------CCCccccccCC-CHHHHHHHHhcc-cCcCC
Confidence            48999999999999999999999999999999764321            13445678998 678887777542 23345


Q ss_pred             -ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          101 -IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       101 -id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                       +|.++++++...        .  ...            ..+.++..+++.+ -.+||++||.....  .       ...
T Consensus        67 ~~d~v~~~~~~~~--------~--~~~------------~~~~~i~aa~~~g-v~~~V~~Ss~~~~~--~-------~~~  114 (285)
T TIGR03649        67 EISAVYLVAPPIP--------D--LAP------------PMIKFIDFARSKG-VRRFVLLSASIIEK--G-------GPA  114 (285)
T ss_pred             ceeEEEEeCCCCC--------C--hhH------------HHHHHHHHHHHcC-CCEEEEeeccccCC--C-------Cch
Confidence             899999876421        0  001            1122333444433 56999999854322  1       112


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhh--hhhhc-CCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN--NVASR-TYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~--~~~~~-~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      +...+.+.+.      ..|+....++|+++..++...........  .+... ......+..++ |+|+++..++.... 
T Consensus       115 ~~~~~~~l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~-Dva~~~~~~l~~~~-  186 (285)
T TIGR03649       115 MGQVHAHLDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSAD-DIARVAYRALTDKV-  186 (285)
T ss_pred             HHHHHHHHHh------ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHH-HHHHHHHHHhcCCC-
Confidence            3222222211      13899999999977654422111000000  00000 00112355666 99999888876432 


Q ss_pred             cccccEEEeCCcccCC
Q 023555          257 YVSGNIFIVDSGATLP  272 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~~  272 (280)
                      . .|..+.+-|+..++
T Consensus       187 ~-~~~~~~l~g~~~~s  201 (285)
T TIGR03649       187 A-PNTDYVVLGPELLT  201 (285)
T ss_pred             c-CCCeEEeeCCccCC
Confidence            2 24556665554443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.09  E-value=3.2e-10  Score=93.73  Aligned_cols=239  Identities=13%  Similarity=0.112  Sum_probs=157.7

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH--HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+|++||||-||--|..+|+.|++.|+.|+-+.|....  ...+ .-.+...-...++....+|++ |..++.++++++ 
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLt-D~~~l~r~l~~v-   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLT-DSSNLLRILEEV-   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEecccc-chHHHHHHHHhc-
Confidence            37999999999999999999999999999988876322  1111 111111112345888999999 678888888876 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc---------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS---------  166 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~---------  166 (280)
                          .+|-+.|.++....     ..+.++-+...+++..|+++++.+. ..+.  .+..++..-||..-+.         
T Consensus        78 ----~PdEIYNLaAQS~V-----~vSFe~P~~T~~~~~iGtlrlLEai-R~~~--~~~~rfYQAStSE~fG~v~~~pq~E  145 (345)
T COG1089          78 ----QPDEIYNLAAQSHV-----GVSFEQPEYTADVDAIGTLRLLEAI-RILG--EKKTRFYQASTSELYGLVQEIPQKE  145 (345)
T ss_pred             ----Cchhheeccccccc-----cccccCcceeeeechhHHHHHHHHH-HHhC--CcccEEEecccHHhhcCcccCcccc
Confidence                89999999987543     3455555667888999999998876 2221  2246777777644322         


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhC---CCCeEEEEeecCcccCccccCccchhh-h------hhhhhcCCCCCCC
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELG---VHKIRVNSICPGLFKSEITEGLMKKDW-L------NNVASRTYPLRDF  236 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~gi~vn~v~pG~v~t~~~~~~~~~~~-~------~~~~~~~~p~~~~  236 (280)
                      ..|+.+.+.|+++|....-++..+...|.   -.||-+|.=+|.-=+|-.++++...-. .      .-.+...-..++.
T Consensus       146 ~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDW  225 (345)
T COG1089         146 TTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDW  225 (345)
T ss_pred             CCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccc
Confidence            12455778999999999999988888774   458888887776555555554421100 0      0011222234556


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCCCC
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      +... |-.++.+.++..+    ..+.+.+..|.+-+.+.|
T Consensus       226 G~A~-DYVe~mwlmLQq~----~PddyViATg~t~sVref  260 (345)
T COG1089         226 GHAK-DYVEAMWLMLQQE----EPDDYVIATGETHSVREF  260 (345)
T ss_pred             cchH-HHHHHHHHHHccC----CCCceEEecCceeeHHHH
Confidence            6676 7777776666543    245666666666555444

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.99  E-value=7.9e-09  Score=85.57  Aligned_cols=223  Identities=14%  Similarity=0.155  Sum_probs=139.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHh--CCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .|.++||||.|.||...+..+...  .++.+.++--.- ......+++.    ...+..++..|+. +...+..++.+  
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~----n~p~ykfv~~di~-~~~~~~~~~~~--   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR----NSPNYKFVEGDIA-DADLVLYLFET--   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc----cCCCceEeecccc-chHHHHhhhcc--
Confidence            389999999999999999999876  334444443110 0012222221    2457888999998 43434333332  


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                         .++|.|+|-|........     .-+-......|+.++..|+.++....    +-.++|++|+-..+...       
T Consensus        79 ---~~id~vihfaa~t~vd~s-----~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhvSTdeVYGds~~~~~~~  146 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHVDRS-----FGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHVSTDEVYGDSDEDAVVG  146 (331)
T ss_pred             ---CchhhhhhhHhhhhhhhh-----cCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEecccceecCcccccccc
Confidence               489999999987643221     22224467889999999988874432    24589999985433211       


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-hhh-hhhhcCCCCC-------CC
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLN-NVASRTYPLR-------DF  236 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-~~~-~~~~~~~p~~-------~~  236 (280)
                         ...+-..|+++|+|.+++++++.+.|   |+.+..++-+-|..|-....---+ +.. ....+..|+.       ..
T Consensus       147 E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~  223 (331)
T KOG0747|consen  147 EASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSY  223 (331)
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceee
Confidence               11123579999999999999999987   677877777777666543221111 111 1122234442       24


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      ...+ |+.+++...+..   .-.|+++++-.
T Consensus       224 l~ve-D~~ea~~~v~~K---g~~geIYNIgt  250 (331)
T KOG0747|consen  224 LYVE-DVSEAFKAVLEK---GELGEIYNIGT  250 (331)
T ss_pred             EeHH-HHHHHHHHHHhc---CCccceeeccC
Confidence            4566 888887777654   23688888744

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.99  E-value=7.3e-09  Score=82.42  Aligned_cols=84  Identities=21%  Similarity=0.282  Sum_probs=70.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +++||||+ |+|.++++.|+++|++|++++|+.+..+.+...+..    ..++.++.+|++ +.+++.++++.+.+.+++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~----~~~i~~~~~Dv~-d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT----PESITPLPLDYH-DDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc----CCcEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence            68999998 677789999999999999999998877666554432    236778899999 789999999999999999


Q ss_pred             ccEEEECCCC
Q 023555          101 IDALVNNAGV  110 (280)
Q Consensus       101 id~li~~ag~  110 (280)
                      +|.+|+.+-.
T Consensus        76 id~lv~~vh~   85 (177)
T PRK08309         76 FDLAVAWIHS   85 (177)
T ss_pred             CeEEEEeccc
Confidence            9999987743

>PRK12320 hypothetical protein; Provisional

Probab=98.98  E-value=3.3e-08  Score=93.55  Aligned_cols=188  Identities=16%  Similarity=0.152  Sum_probs=115.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|.||++++++|.++|++|++++|.....      .      ...+.++.+|++ +. .+.+++       .+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~------~~~ve~v~~Dl~-d~-~l~~al-------~~   60 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------L------DPRVDYVCASLR-NP-VLQELA-------GE   60 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------c------cCCceEEEccCC-CH-HHHHHh-------cC
Confidence            699999999999999999999999999999865321      0      114667899998 43 232222       26


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|++||.|+.. ..      .      ...+|+.++.++++++    ++.  +.++|++||..+.     +.  .|.   
T Consensus        61 ~D~VIHLAa~~-~~------~------~~~vNv~Gt~nLleAA----~~~--GvRiV~~SS~~G~-----~~--~~~---  111 (699)
T PRK12320         61 ADAVIHLAPVD-TS------A------PGGVGITGLAHVANAA----ARA--GARLLFVSQAAGR-----PE--LYR---  111 (699)
T ss_pred             CCEEEEcCccC-cc------c------hhhHHHHHHHHHHHHH----HHc--CCeEEEEECCCCC-----Cc--ccc---
Confidence            89999999763 11      0      1247899999888877    232  3489999986421     11  232   


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhh---cCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS---RTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                       ..+.++    ..   .++.+..+.|+.+..+..... ....+.....   ...|. .+...+ |+++++..++...   
T Consensus       112 -~aE~ll----~~---~~~p~~ILR~~nVYGp~~~~~-~~r~I~~~l~~~~~~~pI-~vIyVd-Dvv~alv~al~~~---  177 (699)
T PRK12320        112 -QAETLV----ST---GWAPSLVIRIAPPVGRQLDWM-VCRTVATLLRSKVSARPI-RVLHLD-DLVRFLVLALNTD---  177 (699)
T ss_pred             -HHHHHH----Hh---cCCCEEEEeCceecCCCCccc-HhHHHHHHHHHHHcCCce-EEEEHH-HHHHHHHHHHhCC---
Confidence             123322    22   246778888887766532211 0111112111   11122 124566 8888887776532   


Q ss_pred             ccccEEEeCCcccCCC
Q 023555          258 VSGNIFIVDSGATLPG  273 (280)
Q Consensus       258 i~G~~i~vdgG~~~~~  273 (280)
                      .+| ++++-+|..++.
T Consensus       178 ~~G-iyNIG~~~~~Si  192 (699)
T PRK12320        178 RNG-VVDLATPDTTNV  192 (699)
T ss_pred             CCC-EEEEeCCCeeEH
Confidence            245 899988876553

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.98  E-value=7.2e-09  Score=85.75  Aligned_cols=160  Identities=18%  Similarity=0.168  Sum_probs=92.5

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      |+||||||.||++++..|.+.|+.|+++.|+..+.......         .+   .     ..+.+....+      .++
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---------~v---~-----~~~~~~~~~~------~~~   57 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP---------NV---T-----LWEGLADALT------LGI   57 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---------cc---c-----ccchhhhccc------CCC
Confidence            58999999999999999999999999999997665432110         00   0     0011111111      179


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh----
Q 023555          102 DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA----  177 (280)
Q Consensus       102 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~----  177 (280)
                      |++||.||..-..+   ..+.+.=+..++    +-+..++.+...+.+..++.++..-+|..++.+.  .....|.    
T Consensus        58 DavINLAG~~I~~r---rWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~--~~~~~~tE~~~  128 (297)
T COG1090          58 DAVINLAGEPIAER---RWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGH--SGDRVVTEESP  128 (297)
T ss_pred             CEEEECCCCccccc---cCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecC--CCceeeecCCC
Confidence            99999999752211   133333333333    3444555555555543334444444444444421  1111111    


Q ss_pred             hhHHHHHHHHHHHHHHh---CCCCeEEEEeecCcccCcc
Q 023555          178 SSKAGLNAMTKCLSLEL---GVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~---~~~gi~vn~v~pG~v~t~~  213 (280)
                      ...-.+..+|+.+-.+.   ...|+||..+.-|.|-.+-
T Consensus       129 ~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~  167 (297)
T COG1090         129 PGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPD  167 (297)
T ss_pred             CCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCC
Confidence            12345666666555444   3459999999999987754

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.97  E-value=6.8e-09  Score=85.98  Aligned_cols=166  Identities=13%  Similarity=0.067  Sum_probs=111.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ...+.+++++||||+|+||++++.+|..+|+.|++.|.-..........+..    ...+..+.-|+.      ..++. 
T Consensus        22 ~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~----~~~fel~~hdv~------~pl~~-   90 (350)
T KOG1429|consen   22 VKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG----HPNFELIRHDVV------EPLLK-   90 (350)
T ss_pred             ccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc----CcceeEEEeech------hHHHH-
Confidence            3467789999999999999999999999999999998754333322222211    123444444443      33444 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----  168 (280)
                            .+|.++|.|...++.....+     -.+.+..|+.++++.+..+     ++. +.|++..|+..-+...     
T Consensus        91 ------evD~IyhLAapasp~~y~~n-----pvktIktN~igtln~lgla-----krv-~aR~l~aSTseVYgdp~~hpq  153 (350)
T KOG1429|consen   91 ------EVDQIYHLAAPASPPHYKYN-----PVKTIKTNVIGTLNMLGLA-----KRV-GARFLLASTSEVYGDPLVHPQ  153 (350)
T ss_pred             ------HhhhhhhhccCCCCcccccC-----ccceeeecchhhHHHHHHH-----HHh-CceEEEeecccccCCcccCCC
Confidence                  46888888877654432211     1346788999999888876     222 4688888886543210     


Q ss_pred             ---------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCccc
Q 023555          169 ---------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK  210 (280)
Q Consensus       169 ---------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~  210 (280)
                               +....++|...|.+.+.|+..+.++.   ||.|....+--+.
T Consensus       154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNty  201 (350)
T KOG1429|consen  154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNTY  201 (350)
T ss_pred             ccccccccCcCCchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeeccc
Confidence                     12246799999999999999988875   7777666554333

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=7.5e-08  Score=82.80  Aligned_cols=83  Identities=19%  Similarity=0.301  Sum_probs=62.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecCh---hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV---DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++++++.+++.+..+   .+....+|++ +.++++..+
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~---~~~~~~~d~~-~~~~~~~~~  197 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP---ECIVNVYDLN-DTEKLKAEI  197 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC---CceeEEechh-hhhHHHhhh
Confidence            578999999999 69999999999999996 99999996   677777777754322   3344566776 444444433


Q ss_pred             HHHHHHcCCccEEEECCCC
Q 023555           92 QKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~  110 (280)
                      +       ..|+|||+...
T Consensus       198 ~-------~~DilINaTp~  209 (289)
T PRK12548        198 A-------SSDILVNATLV  209 (289)
T ss_pred             c-------cCCEEEEeCCC
Confidence            3       56999999854

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.71  E-value=4.7e-08  Score=87.29  Aligned_cols=79  Identities=22%  Similarity=0.328  Sum_probs=59.5

Q ss_pred             CCCCCcEEEEecC----------------CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEe
Q 023555           15 CQLDNKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL   78 (280)
Q Consensus        15 ~~l~~k~vlItG~----------------~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (280)
                      .+++||++|||||                +|++|+++|++|+++|++|++++++.+ ++       .  +.  .  ...+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~--~~--~--~~~~  249 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T--PA--G--VKRI  249 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C--CC--C--cEEE
Confidence            4689999999999                555999999999999999999998752 11       0  11  1  2357


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           79 DVSANGAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        79 D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                      |++ +.+++.+.+.   +.++++|++|||||+.
T Consensus       250 dv~-~~~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        250 DVE-SAQEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             ccC-CHHHHHHHHH---HhcCCCCEEEEccccc
Confidence            887 5555555544   5678999999999975

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.70  E-value=1.9e-07  Score=77.78  Aligned_cols=200  Identities=18%  Similarity=0.164  Sum_probs=110.7

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      |+|+||+|.+|+++++.|.+.|++|.++.|+..+.  ..+++...     .+..+..|+. +.+++.++++       ++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~--~~~~l~~~-----g~~vv~~d~~-~~~~l~~al~-------g~   65 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD--RAQQLQAL-----GAEVVEADYD-DPESLVAALK-------GV   65 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH--HHHHHHHT-----TTEEEES-TT--HHHHHHHHT-------TC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh--hhhhhhcc-----cceEeecccC-CHHHHHHHHc-------CC
Confidence            78999999999999999999999999999987331  22233321     2445699987 6666666665       89


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC--CCChhh
Q 023555          102 DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG--VAYASS  179 (280)
Q Consensus       102 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~--~~Y~~s  179 (280)
                      |.++++.+...      ...           ......+++++.    +.+ -.++|+ ||............  ..+-..
T Consensus        66 d~v~~~~~~~~------~~~-----------~~~~~~li~Aa~----~ag-Vk~~v~-ss~~~~~~~~~~~~p~~~~~~~  122 (233)
T PF05368_consen   66 DAVFSVTPPSH------PSE-----------LEQQKNLIDAAK----AAG-VKHFVP-SSFGADYDESSGSEPEIPHFDQ  122 (233)
T ss_dssp             SEEEEESSCSC------CCH-----------HHHHHHHHHHHH----HHT--SEEEE-SEESSGTTTTTTSTTHHHHHHH
T ss_pred             ceEEeecCcch------hhh-----------hhhhhhHHHhhh----ccc-cceEEE-EEecccccccccccccchhhhh
Confidence            99999887542      111           112334455552    222 457774 55443221100011  112234


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhh---hhhcCCCCC---CCC-CChHHHHHHHHHhhc
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN---VASRTYPLR---DFG-TTDPALTSLVRYLVH  252 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~p~~---~~~-~~~~~va~~~~~l~s  252 (280)
                      |..++...+.       .++....|.||+.................   ...-..+..   .+. ..+ |+++.+..++.
T Consensus       123 k~~ie~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dvg~~va~il~  194 (233)
T PF05368_consen  123 KAEIEEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTR-DVGRAVAAILL  194 (233)
T ss_dssp             HHHHHHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHH-HHHHHHHHHHH
T ss_pred             hhhhhhhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHH-HHHHHHHHHHc
Confidence            5555433322       28999999999865443322111000000   000001111   122 344 99999988887


Q ss_pred             CCCCcccccEEEeCC
Q 023555          253 DSSEYVSGNIFIVDS  267 (280)
Q Consensus       253 ~~~~~i~G~~i~vdg  267 (280)
                      ....+-.|..+.+-|
T Consensus       195 ~p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  195 DPEKHNNGKTIFLAG  209 (233)
T ss_dssp             SGGGTTEEEEEEEGG
T ss_pred             ChHHhcCCEEEEeCC
Confidence            755554777877754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.67  E-value=3e-07  Score=74.42  Aligned_cols=83  Identities=22%  Similarity=0.383  Sum_probs=64.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++++++|+||+|++|+++++.|++.|++|++++|+.++++.+.+++.+..+    .....+|.. +.+++.+.+.   
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~----~~~~~~~~~-~~~~~~~~~~---   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG----EGVGAVETS-DDAARAAAIK---   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC----CcEEEeeCC-CHHHHHHHHh---
Confidence            68899999999999999999999999999999999999988888877754332    223455666 4455555443   


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                          +.|++|+....
T Consensus        97 ----~~diVi~at~~  107 (194)
T cd01078          97 ----GADVVFAAGAA  107 (194)
T ss_pred             ----cCCEEEECCCC
Confidence                67999887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.67  E-value=1.3e-07  Score=91.12  Aligned_cols=173  Identities=14%  Similarity=0.219  Sum_probs=130.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHH---HHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLK---SLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      -..|..+|+||-||.|..+|..|..+|++ +++++|+.-+..   .....+.+   .++.+..-..|++ ..+..+.+++
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~---~GVqV~vsT~nit-t~~ga~~Li~ 1841 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR---RGVQVQVSTSNIT-TAEGARGLIE 1841 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh---cCeEEEEecccch-hhhhHHHHHH
Confidence            34789999999999999999999999996 889999865432   12233332   3566766677777 5566777777


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +. .+.+.+-.++|.|.+. ...-+++.+.++|++.-+..+.++.++-+.--.....   -..+|..||++...  +..+
T Consensus      1842 ~s-~kl~~vGGiFnLA~VL-RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~FSSvscGR--GN~G 1914 (2376)
T KOG1202|consen 1842 ES-NKLGPVGGIFNLAAVL-RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVFSSVSCGR--GNAG 1914 (2376)
T ss_pred             Hh-hhcccccchhhHHHHH-HhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEEEeecccC--CCCc
Confidence            65 4568899999999876 4567889999999999999999999887765433322   34788888887665  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEE
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRV  201 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~v  201 (280)
                      +..|+-+.++++.+++.-..+ +-.|+-+
T Consensus      1915 QtNYG~aNS~MERiceqRr~~-GfPG~Ai 1942 (2376)
T KOG1202|consen 1915 QTNYGLANSAMERICEQRRHE-GFPGTAI 1942 (2376)
T ss_pred             ccccchhhHHHHHHHHHhhhc-CCCccee
Confidence            999999999999999876544 3335444

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.67  E-value=1e-07  Score=76.55  Aligned_cols=192  Identities=16%  Similarity=0.147  Sum_probs=113.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC---eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++++|||++|-+|++|.+.+.+.|.   +.++.+.                        -++|++ +.++.+++++..  
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------kd~DLt-~~a~t~~lF~~e--   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------KDADLT-NLADTRALFESE--   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------cccccc-chHHHHHHHhcc--
Confidence            6899999999999999999999876   2334333                        257888 567888888764  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc----------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS----------  166 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~----------  166 (280)
                         ++.++||.|+..+-.-.....+.+-|...+++|    -++++.+..+=     -.++|++.|..-+-          
T Consensus        55 ---kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa~e~g-----v~K~vsclStCIfPdkt~yPIdEt  122 (315)
T KOG1431|consen   55 ---KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSAHEHG-----VKKVVSCLSTCIFPDKTSYPIDET  122 (315)
T ss_pred             ---CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHHHHhc-----hhhhhhhcceeecCCCCCCCCCHH
Confidence               788999999664321111223344444433333    33344432211     22455555433110          


Q ss_pred             ----CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc------ccCcc------------chhhhh
Q 023555          167 ----RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI------TEGLM------------KKDWLN  224 (280)
Q Consensus       167 ----~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~------~~~~~------------~~~~~~  224 (280)
                          +.+.|.+..|+.+|..+.-..+.++.+++.   ...++.|--+-.|-      ..-..            ......
T Consensus       123 mvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~  199 (315)
T KOG1431|consen  123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDEL  199 (315)
T ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceE
Confidence                113456789999999888888988888754   33333332221110      00000            000011


Q ss_pred             hhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          225 NVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       225 ~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .......|++.|.... |.|+++.|++..-
T Consensus       200 ~VwGsG~PlRqFiys~-DLA~l~i~vlr~Y  228 (315)
T KOG1431|consen  200 TVWGSGSPLRQFIYSD-DLADLFIWVLREY  228 (315)
T ss_pred             EEecCCChHHHHhhHh-HHHHHHHHHHHhh
Confidence            1233446888888888 9999999998643

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.66  E-value=3.9e-06  Score=76.61  Aligned_cols=193  Identities=16%  Similarity=0.137  Sum_probs=122.0

Q ss_pred             ccCCCCCcEEEEecCC-ChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHH
Q 023555           13 PWCQLDNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~-~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~   89 (280)
                      +-....+|.+||||++ +.||.+++..|+..|++||++..+ .+...+..+.+...++.. ..+..+..++. +..+++.
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~-SysDVdA  468 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMG-SYSDVDA  468 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEecccc-chhhHHH
Confidence            3347889999999999 789999999999999999998766 445566667776665533 45777889998 7899999


Q ss_pred             HHHHHHHHcC--------------CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCe
Q 023555           90 SVQKAWEAFG--------------RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGS  155 (280)
Q Consensus        90 ~~~~~~~~~g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~  155 (280)
                      +++.+-+.-.              .++.++--|.+. ..+.+.+.... -+..+.+-+++..+++-.+.+.-..++-..|
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~-v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R  546 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR-VSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTR  546 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCC-ccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccc
Confidence            9999864311              266777666553 33444444332 1333444455555554443332222222233


Q ss_pred             --EEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhC-CCCeEEEEeecCcccC
Q 023555          156 --VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG-VHKIRVNSICPGLFKS  211 (280)
Q Consensus       156 --vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~gi~vn~v~pG~v~t  211 (280)
                        ||.=.|-.   .+.+.+...|+-+|++++.+.--+..|-+ ...+.+..-..||+..
T Consensus       547 ~hVVLPgSPN---rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrG  602 (866)
T COG4982         547 LHVVLPGSPN---RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRG  602 (866)
T ss_pred             eEEEecCCCC---CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecc
Confidence              34333322   22456778999999999988766655531 1124444555677754

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.65  E-value=9.4e-07  Score=79.37  Aligned_cols=183  Identities=17%  Similarity=0.205  Sum_probs=117.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC---eEEEEecCh--h---------HHHHHHHHHHhhcC-CCcceEEEEecc
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRV--D---------RLKSLCDEINKQSG-SSVRAMAVELDV   80 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~---~v~l~~r~~--~---------~~~~~~~~~~~~~~-~~~~~~~~~~D~   80 (280)
                      -++||+++||||||++|+-+...|++.--   ++++.-|..  +         ..+++.+.+.+..+ .-.++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            48999999999999999999999997642   577776642  1         11233333433332 225778888888


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      +++.-.+...--+..  ...+|++||+|+....        .|.++..+.+|++|+.++++.+.. |.+   -...|.+|
T Consensus        89 ~~~~LGis~~D~~~l--~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~-~~~---l~~~vhVS  154 (467)
T KOG1221|consen   89 SEPDLGISESDLRTL--ADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKE-MVK---LKALVHVS  154 (467)
T ss_pred             cCcccCCChHHHHHH--HhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHH-hhh---hheEEEee
Confidence            743333331111111  1289999999987632        245677899999999999987643 333   35889998


Q ss_pred             ccccccCC------CCC--------------------------------CCCCChhhHHHHHHHHHHHHHHhCCCCeEEE
Q 023555          161 SIAATSRG------QLP--------------------------------GGVAYASSKAGLNAMTKCLSLELGVHKIRVN  202 (280)
Q Consensus       161 S~~~~~~~------~~~--------------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn  202 (280)
                      +.......      +++                                ..-.|.=+|+-.+.+...-+     .++.+.
T Consensus       155 TAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPiv  229 (467)
T KOG1221|consen  155 TAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLV  229 (467)
T ss_pred             hhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeE
Confidence            86654100      000                                12356666776666655444     367889


Q ss_pred             EeecCcccCccccCc
Q 023555          203 SICPGLFKSEITEGL  217 (280)
Q Consensus       203 ~v~pG~v~t~~~~~~  217 (280)
                      .++|..|.+...+++
T Consensus       230 IiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  230 IIRPSIITSTYKEPF  244 (467)
T ss_pred             EEcCCceeccccCCC
Confidence            999998876655443

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.46  E-value=9.3e-07  Score=73.36  Aligned_cols=100  Identities=16%  Similarity=0.142  Sum_probs=65.6

Q ss_pred             cEEEEecCCCh-hHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSG-LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~g-iG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .+=.||+.++| +|+++|++|+++|++|++++|.....        ...  ...+.++.++.      .+.+.+.+.+.+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~~--~~~v~~i~v~s------~~~m~~~l~~~~   79 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PEP--HPNLSIIEIEN------VDDLLETLEPLV   79 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CCC--CCCeEEEEEec------HHHHHHHHHHHh
Confidence            36678876665 99999999999999999998764210        000  01233344322      233334444445


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHH
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS  136 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~  136 (280)
                      +.+|++||+||+. ...+....+.+++.+.+++|.+..
T Consensus        80 ~~~DivIh~AAvs-d~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         80 KDHDVLIHSMAVS-DYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             cCCCEEEeCCccC-Cceehhhhhhhhhhhhhhhhhhhc
Confidence            6899999999986 334555667888888888865553

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.41  E-value=1.8e-05  Score=67.25  Aligned_cols=134  Identities=17%  Similarity=0.189  Sum_probs=91.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +.+|||||||.+|++++++|.++|++|.+..|+.+.+....          ..+.+...|+. +.+++...++       
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----------~~v~~~~~d~~-~~~~l~~a~~-------   62 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVLGDLR-DPKSLVAGAK-------   62 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----------CCcEEEEeccC-CHhHHHHHhc-------
Confidence            36899999999999999999999999999999998877654          26778899998 6666666655       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|.+++..+... ... .         .............+...      .+...++.+|...+..    .....|..+
T Consensus        63 G~~~~~~i~~~~~-~~~-~---------~~~~~~~~~~~~a~~a~------~~~~~~~~~s~~~~~~----~~~~~~~~~  121 (275)
T COG0702          63 GVDGVLLISGLLD-GSD-A---------FRAVQVTAVVRAAEAAG------AGVKHGVSLSVLGADA----ASPSALARA  121 (275)
T ss_pred             cccEEEEEecccc-ccc-c---------hhHHHHHHHHHHHHHhc------CCceEEEEeccCCCCC----CCccHHHHH
Confidence            7888888877542 111 0         11222334444444431      1134677776655432    345678999


Q ss_pred             HHHHHHHHHHHHH
Q 023555          180 KAGLNAMTKCLSL  192 (280)
Q Consensus       180 K~a~~~l~~~la~  192 (280)
                      |...+...++...
T Consensus       122 ~~~~e~~l~~sg~  134 (275)
T COG0702         122 KAAVEAALRSSGI  134 (275)
T ss_pred             HHHHHHHHHhcCC
Confidence            9988876655443

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.39  E-value=8.7e-07  Score=78.94  Aligned_cols=109  Identities=20%  Similarity=0.233  Sum_probs=70.9

Q ss_pred             CCCCCcEEEEecC---------------CCh-hHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEe
Q 023555           15 CQLDNKVVMVTGA---------------SSG-LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL   78 (280)
Q Consensus        15 ~~l~~k~vlItG~---------------~~g-iG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (280)
                      .+++||++|||||               |+| +|.++|++|..+|++|+++++.....          .+.  .  ...+
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~--~--~~~~  246 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPP--G--VKSI  246 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCC--C--cEEE
Confidence            3689999999999               566 99999999999999999988764321          111  1  1456


Q ss_pred             ccCCCHHHH-HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHH---HHHHHhhhhHHHHHHHHH
Q 023555           79 DVSANGAAI-ENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW---NHIMKTNLTGSWLVSKYV  143 (280)
Q Consensus        79 D~~~~~~~~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~  143 (280)
                      |++ +.+++ ++++++   .++++|++|+|||+.. ..+... ..+.+   .+.+.+|+...-.+++.+
T Consensus       247 ~v~-~~~~~~~~~~~~---~~~~~D~~i~~Aavsd-~~~~~~-~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       247 KVS-TAEEMLEAALNE---LAKDFDIFISAAAVAD-FKPKTV-FEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             Eec-cHHHHHHHHHHh---hcccCCEEEEcccccc-cccccc-ccccccccCCceeEEEEeCcHHHHHH
Confidence            777 55566 444433   3468999999999853 222211 11111   123456666666666655

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.30  E-value=2.2e-05  Score=69.54  Aligned_cols=176  Identities=18%  Similarity=0.136  Sum_probs=103.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ...+-.+|+|+||+|++|+-+++.|.++|+.|.++-|+.++.+.... +..   .......+..|.....+....+++..
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~---~d~~~~~v~~~~~~~~d~~~~~~~~~  150 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFF---VDLGLQNVEADVVTAIDILKKLVEAV  150 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccc---cccccceeeeccccccchhhhhhhhc
Confidence            35677899999999999999999999999999999999888777655 100   01123333444432322223333321


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                         --...+++-++|..+...        +...-..+.+.|..++++++     +..+-.++|.+||+...... .+   
T Consensus       151 ---~~~~~~v~~~~ggrp~~e--------d~~~p~~VD~~g~knlvdA~-----~~aGvk~~vlv~si~~~~~~-~~---  210 (411)
T KOG1203|consen  151 ---PKGVVIVIKGAGGRPEEE--------DIVTPEKVDYEGTKNLVDAC-----KKAGVKRVVLVGSIGGTKFN-QP---  210 (411)
T ss_pred             ---cccceeEEecccCCCCcc--------cCCCcceecHHHHHHHHHHH-----HHhCCceEEEEEeecCcccC-CC---
Confidence               113456666665432211        11222344566788888887     22224699999988765422 12   


Q ss_pred             CChhhHHH-HHHHHH-HHHHHhCCCCeEEEEeecCcccCcccc
Q 023555          175 AYASSKAG-LNAMTK-CLSLELGVHKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       175 ~Y~~sK~a-~~~l~~-~la~~~~~~gi~vn~v~pG~v~t~~~~  215 (280)
                       |...... ...-.+ ....++...|+.-..|.||..+.+...
T Consensus       211 -~~~~~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~  252 (411)
T KOG1203|consen  211 -PNILLLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGG  252 (411)
T ss_pred             -chhhhhhhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCC
Confidence             2222211 111121 223334467899999999988776543

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.25  E-value=1.1e-05  Score=61.34  Aligned_cols=78  Identities=29%  Similarity=0.465  Sum_probs=59.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++|+++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+.+..     ..+..+..  . +   ...... 
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~-----~~~~~~~~--~-~---~~~~~~-   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG-----VNIEAIPL--E-D---LEEALQ-   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG-----CSEEEEEG--G-G---HCHHHH-
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc-----cccceeeH--H-H---HHHHHh-
Confidence            4789999999998 99999999999999997 99999999999998888721     13333333  2 2   222222 


Q ss_pred             HHHHcCCccEEEECCCCC
Q 023555           94 AWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~  111 (280)
                            ..|++|++++..
T Consensus        75 ------~~DivI~aT~~~   86 (135)
T PF01488_consen   75 ------EADIVINATPSG   86 (135)
T ss_dssp             ------TESEEEE-SSTT
T ss_pred             ------hCCeEEEecCCC
Confidence                  689999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.23  E-value=6.2e-06  Score=72.82  Aligned_cols=77  Identities=22%  Similarity=0.365  Sum_probs=63.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++||.|+ |+||+.+|+.|+++| .+|++.+|+.++.+++.+....      ++....+|+. +.+.+.++++      
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~------~v~~~~vD~~-d~~al~~li~------   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG------KVEALQVDAA-DVDALVALIK------   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc------cceeEEeccc-ChHHHHHHHh------
Confidence            57899999 999999999999999 7999999999988887665432      7888999998 6666666666      


Q ss_pred             CCccEEEECCCCC
Q 023555           99 GRIDALVNNAGVS  111 (280)
Q Consensus        99 g~id~li~~ag~~  111 (280)
                       ..|++||++...
T Consensus        68 -~~d~VIn~~p~~   79 (389)
T COG1748          68 -DFDLVINAAPPF   79 (389)
T ss_pred             -cCCEEEEeCCch
Confidence             349999998653

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.22  E-value=1.3e-05  Score=66.91  Aligned_cols=140  Identities=19%  Similarity=0.193  Sum_probs=95.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +..|-++-|.||||.+|+.++.+|++.|-.|++-.|-++.--.-.+-    .|.-.++.+...|+. |+++++++++   
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkv----mGdLGQvl~~~fd~~-DedSIr~vvk---  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKV----MGDLGQVLFMKFDLR-DEDSIRAVVK---  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheee----cccccceeeeccCCC-CHHHHHHHHH---
Confidence            35566888999999999999999999999999999965432211111    122347899999999 7899999988   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                          .-+++||..|.--+.+   +.+.      -++|+.++-.+.+.+     +..+--++|.+|+..+..    ...+-
T Consensus       130 ----~sNVVINLIGrd~eTk---nf~f------~Dvn~~~aerlAric-----ke~GVerfIhvS~Lganv----~s~Sr  187 (391)
T KOG2865|consen  130 ----HSNVVINLIGRDYETK---NFSF------EDVNVHIAERLARIC-----KEAGVERFIHVSCLGANV----KSPSR  187 (391)
T ss_pred             ----hCcEEEEeeccccccC---Cccc------ccccchHHHHHHHHH-----HhhChhheeehhhccccc----cChHH
Confidence                4589999998742222   2222      356777777777766     333345999999876432    22233


Q ss_pred             ChhhHHHHHH
Q 023555          176 YASSKAGLNA  185 (280)
Q Consensus       176 Y~~sK~a~~~  185 (280)
                      |=-+|++-+-
T Consensus       188 ~LrsK~~gE~  197 (391)
T KOG2865|consen  188 MLRSKAAGEE  197 (391)
T ss_pred             HHHhhhhhHH
Confidence            4445555543

>PLN00106 malate dehydrogenase

Probab=98.16  E-value=2e-05  Score=68.53  Aligned_cols=166  Identities=13%  Similarity=0.126  Sum_probs=99.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      -..++|+|+|++|.+|.+++..|+.++.  .++++|.++  ++....++.....   ..  ...+++++ ++....    
T Consensus        16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~---~~--~i~~~~~~-~d~~~~----   83 (323)
T PLN00106         16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT---PA--QVRGFLGD-DQLGDA----   83 (323)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc---Cc--eEEEEeCC-CCHHHH----
Confidence            3457999999999999999999997766  699999977  2221223332211   11  11232211 122222    


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc----c-----
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA----T-----  165 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~----~-----  165 (280)
                         +...|++|+.||....  +  ..+   +.+.+..|+....    .+.+.+.+.+..+.++++|.-.-    .     
T Consensus        84 ---l~~aDiVVitAG~~~~--~--g~~---R~dll~~N~~i~~----~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~  149 (323)
T PLN00106         84 ---LKGADLVIIPAGVPRK--P--GMT---RDDLFNINAGIVK----TLCEAVAKHCPNALVNIISNPVNSTVPIAAEVL  149 (323)
T ss_pred             ---cCCCCEEEEeCCCCCC--C--CCC---HHHHHHHHHHHHH----HHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH
Confidence               3479999999997522  1  233   4556777777655    44445555553444444444331    1     


Q ss_pred             -cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCc
Q 023555          166 -SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGL  208 (280)
Q Consensus       166 -~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~  208 (280)
                       ...++|..-.|+.++.-...|-..+|.++.-.-..|....-|-
T Consensus       150 ~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGe  193 (323)
T PLN00106        150 KKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGG  193 (323)
T ss_pred             HHcCCCCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEe
Confidence             1124566678999987777899999999864433444444443

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.10  E-value=2.1e-05  Score=68.57  Aligned_cols=73  Identities=29%  Similarity=0.440  Sum_probs=55.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh-C-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA-G-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~-G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++|+++||||+|.||+.+++.|+++ | .+++++.|+.+++..+.+++..            .++.    +++     
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------------~~i~----~l~-----  210 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------------GKIL----SLE-----  210 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------------ccHH----hHH-----
Confidence            689999999999999999999999865 5 4799999998888776655421            1111    122     


Q ss_pred             HHHHcCCccEEEECCCCC
Q 023555           94 AWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~  111 (280)
                        +.+...|++|+.++..
T Consensus       211 --~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        211 --EALPEADIVVWVASMP  226 (340)
T ss_pred             --HHHccCCEEEECCcCC
Confidence              2334789999999874

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.05  E-value=2.2e-05  Score=71.89  Aligned_cols=77  Identities=26%  Similarity=0.361  Sum_probs=56.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+++ +|.++|+.|++.|++|++++++. +..++..+++...     .+.....|.. +           
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~-----~~~~~~~~~~-~-----------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL-----GIELVLGEYP-E-----------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCEEEeCCcc-h-----------
Confidence            68899999999877 99999999999999999999975 3444444444321     2335556655 2           


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                       +..+.+|++|+++|..
T Consensus        64 -~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         64 -EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             -hHhhcCCEEEECCCCC
Confidence             1234799999999874

>PRK09620 hypothetical protein; Provisional

Probab=98.05  E-value=1.2e-05  Score=66.50  Aligned_cols=82  Identities=16%  Similarity=0.262  Sum_probs=51.8

Q ss_pred             CCCcEEEEecCC----------------ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEecc
Q 023555           17 LDNKVVMVTGAS----------------SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV   80 (280)
Q Consensus        17 l~~k~vlItG~~----------------~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   80 (280)
                      |+||+||||+|.                |.+|.++|++|.++|++|+++++.......   .+    +.......+..| 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~----~~~~~~~~V~s~-   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI----NNQLELHPFEGI-   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc----CCceeEEEEecH-
Confidence            579999999886                999999999999999999988764211000   00    011223333332 


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                          .++...+.++... .++|++||.|+..
T Consensus        73 ----~d~~~~l~~~~~~-~~~D~VIH~AAvs   98 (229)
T PRK09620         73 ----IDLQDKMKSIITH-EKVDAVIMAAAGS   98 (229)
T ss_pred             ----HHHHHHHHHHhcc-cCCCEEEECcccc
Confidence                2222333333321 2689999999874

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.99  E-value=4.8e-05  Score=66.17  Aligned_cols=152  Identities=16%  Similarity=0.188  Sum_probs=88.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++.++++|+|++|.||.+++..|+..+  ..++++|+..  ++....++.....   ..  ...+.+ +..+..+.+   
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~---~~--~v~~~t-d~~~~~~~l---   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT---PA--KVTGYA-DGELWEKAL---   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc---Cc--eEEEec-CCCchHHHh---
Confidence            566799999999999999999999665  4799999932  2222223332211   11  222333 212212222   


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc---------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT---------  165 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~---------  165 (280)
                          ...|++|+.+|....  +  ..+   +.+.+..|+...-.    +.+.|++.+ ..++|+++|-...         
T Consensus        75 ----~gaDvVVitaG~~~~--~--~~t---R~dll~~N~~i~~~----i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~  138 (321)
T PTZ00325         75 ----RGADLVLICAGVPRK--P--GMT---RDDLFNTNAPIVRD----LVAAVASSA-PKAIVGIVSNPVNSTVPIAAET  138 (321)
T ss_pred             ----CCCCEEEECCCCCCC--C--CCC---HHHHHHHHHHHHHH----HHHHHHHHC-CCeEEEEecCcHHHHHHHHHhh
Confidence                378999999997421  1  223   45567777766654    445555544 4577777763211         


Q ss_pred             --cCCCCCCCCCChhhHHHHHHHHHHHHHHhC
Q 023555          166 --SRGQLPGGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       166 --~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                        ...++|..-.|+.+-.=-..|-..+|..+.
T Consensus       139 ~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        139 LKKAGVYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             hhhccCCChhheeechhHHHHHHHHHHHHHhC
Confidence              112445666788862222256667777764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.99  E-value=3.6e-05  Score=69.06  Aligned_cols=76  Identities=25%  Similarity=0.415  Sum_probs=57.7

Q ss_pred             EEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+|.|+ |.+|+.+++.|++++.  +|++.+|+.+++++..+++     ...++....+|+. +.+++.++++       
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-----~~~~~~~~~~d~~-~~~~l~~~~~-------   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-----LGDRVEAVQVDVN-DPESLAELLR-------   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-------TTTTEEEEE--TT-THHHHHHHHT-------
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-----cccceeEEEEecC-CHHHHHHHHh-------
Confidence            689999 9999999999999975  7999999999998887765     2347899999998 6666666665       


Q ss_pred             CccEEEECCCCC
Q 023555          100 RIDALVNNAGVS  111 (280)
Q Consensus       100 ~id~li~~ag~~  111 (280)
                      ..|++||++|..
T Consensus        67 ~~dvVin~~gp~   78 (386)
T PF03435_consen   67 GCDVVINCAGPF   78 (386)
T ss_dssp             TSSEEEE-SSGG
T ss_pred             cCCEEEECCccc
Confidence            569999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.95  E-value=0.00093  Score=51.09  Aligned_cols=116  Identities=21%  Similarity=0.302  Sum_probs=75.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|+|++|.+|.+++..|...+.  ++++++++++.++....++.........-..+..+..              +.+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~--------------~~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDY--------------EAL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSG--------------GGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccc--------------ccc
Confidence            588999999999999999999876  6999999988887777777665432211122222211              123


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ...|++|..+|....   + ..+..+   .++.|    ..+++.+.+.+.+....+.++.+|.
T Consensus        68 ~~aDivvitag~~~~---~-g~sR~~---ll~~N----~~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRK---P-GMSRLD---LLEAN----AKIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSS---T-TSSHHH---HHHHH----HHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             ccccEEEEecccccc---c-cccHHH---HHHHh----HhHHHHHHHHHHHhCCccEEEEeCC
Confidence            478999999997521   1 234433   34444    4455666677777666677777653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.93  E-value=7.7e-05  Score=65.22  Aligned_cols=116  Identities=16%  Similarity=0.148  Sum_probs=67.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhC-------CeEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAG-------CRIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G-------~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +++|||++|.+|.+++..|+..+       ..|+++++++.  .++....++.....      ....|+. ..       
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~------~~~~~~~-~~-------   69 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAF------PLLKSVV-AT-------   69 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccc------cccCCce-ec-------
Confidence            58999999999999999999844       58999999653  12221111111000      0011221 11       


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEec
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISS  161 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS  161 (280)
                      ....+.+.+.|++||.||....    ...+.+   +.++.|+    .+++.+.+.+.+.. +.+.+|.+|.
T Consensus        70 ~~~~~~l~~aDiVI~tAG~~~~----~~~~R~---~l~~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          70 TDPEEAFKDVDVAILVGAMPRK----EGMERK---DLLKANV----KIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             CCHHHHhCCCCEEEEeCCcCCC----CCCCHH---HHHHHHH----HHHHHHHHHHHHhCCCCeEEEEecC
Confidence            1112333489999999998522    123433   3444444    45566666776653 4677777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.83  E-value=0.00072  Score=58.74  Aligned_cols=115  Identities=15%  Similarity=0.217  Sum_probs=76.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +++.|.|+ |++|++++..|+..|  .+|++++++++.++....++++..... ..... ..  . +.   +        
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i-~~--~-~~---~--------   64 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKI-KA--G-DY---S--------   64 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEE-Ec--C-CH---H--------
Confidence            36888886 899999999999999  479999999998888888876543211 11111 11  1 21   1        


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      .....|++|+.+|...  .+  ..+..+   .++.    ...+++.+.+.+.+....+.+|++|.
T Consensus        65 ~l~~aDIVIitag~~~--~~--g~~R~d---ll~~----N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          65 DCKDADIVVITAGAPQ--KP--GETRLD---LLEK----NAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             HhCCCCEEEEccCCCC--CC--CCCHHH---HHHH----HHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            1247899999998742  21  334433   3333    44566777777777776788888875

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.78  E-value=0.00012  Score=62.99  Aligned_cols=83  Identities=19%  Similarity=0.348  Sum_probs=70.3

Q ss_pred             EEEEecCCChhHHHHHHHHHH----hCCeEEEEecChhHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAK----AGCRIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -++|.||+|..|.-++.++..    .|..+.+.+|+++++++..+++.+..+.. .....+.+|.+ +++++.+++++  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~-n~~Sl~emak~--   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSA-NEASLDEMAKQ--   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCC-CHHHHHHHHhh--
Confidence            579999999999999999999    78889999999999999999998876542 12337789998 77888888884  


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                           ..+++|++|..
T Consensus        84 -----~~vivN~vGPy   94 (423)
T KOG2733|consen   84 -----ARVIVNCVGPY   94 (423)
T ss_pred             -----hEEEEeccccc
Confidence                 57999999975

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.78  E-value=0.00088  Score=58.37  Aligned_cols=119  Identities=14%  Similarity=0.207  Sum_probs=80.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +-.++++.|+|+ |.+|.++|..++..|.  .+++++++++.++....++....+...++. +..  . +.         
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-i~~--~-~~---------   68 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-IYA--G-DY---------   68 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeE-EEe--C-CH---------
Confidence            456789999998 9999999999999988  699999999888888888876542211211 111  1 11         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                        +.+...|++|..+|...  ++  ..+..+   .++.|.    .+++.+.+.+.+.+..+.+|++|.
T Consensus        69 --~~~~~adivIitag~~~--k~--g~~R~d---ll~~N~----~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         69 --SDCKDADLVVITAGAPQ--KP--GETRLD---LVEKNL----KIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             --HHhCCCCEEEEecCCCC--CC--CCCHHH---HHHHHH----HHHHHHHHHHHHhCCCeEEEEccC
Confidence              12247899999999742  21  344443   344443    455666677777666778888875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.77  E-value=0.0019  Score=50.86  Aligned_cols=151  Identities=14%  Similarity=0.187  Sum_probs=96.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++.|.||+|..|..+++...++|+.|..+.|++.+....           ..+...+.|+. +.+++.+.+.       +
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----------~~~~i~q~Dif-d~~~~a~~l~-------g   62 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----------QGVTILQKDIF-DLTSLASDLA-------G   62 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----------ccceeeccccc-ChhhhHhhhc-------C
Confidence            578999999999999999999999999999998876543           14556788998 5555544443       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC------CCCC-
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ------LPGG-  173 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~------~~~~-  173 (280)
                      .|++|..-|...+       +.+...          ....++++..++.. ...|++.|+..++....+      .|.+ 
T Consensus        63 ~DaVIsA~~~~~~-------~~~~~~----------~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g~rLvD~p~fP  124 (211)
T COG2910          63 HDAVISAFGAGAS-------DNDELH----------SKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEGTRLVDTPDFP  124 (211)
T ss_pred             CceEEEeccCCCC-------ChhHHH----------HHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCCceeecCCCCc
Confidence            8999988876421       111111          11145555555443 367999998877654211      1111 


Q ss_pred             -CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc
Q 023555          174 -VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE  212 (280)
Q Consensus       174 -~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~  212 (280)
                       ..|..+++.-+ +.+.|..+   +.+.-.-|+|..+-.|
T Consensus       125 ~ey~~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910         125 AEYKPEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             hhHHHHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCC
Confidence             23444444433 33444444   3588888999876555

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.72  E-value=0.00065  Score=58.68  Aligned_cols=79  Identities=16%  Similarity=0.239  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|++++|+|+++++|+++++.+...|.+|+++++++++.+.+. ++    +  ...   .+|.. ..+..+.+.+.. . 
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g--~~~---~~~~~-~~~~~~~~~~~~-~-  210 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA----G--ADA---VFNYR-AEDLADRILAAT-A-  210 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----C--CCE---EEeCC-CcCHHHHHHHHc-C-
Confidence            5899999999999999999999999999999999887665542 22    1  111   12333 222333332221 1 


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      .+++|.+++++|
T Consensus       211 ~~~~d~vi~~~~  222 (325)
T cd08253         211 GQGVDVIIEVLA  222 (325)
T ss_pred             CCceEEEEECCc
Confidence            236999999886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.70  E-value=0.00016  Score=56.35  Aligned_cols=162  Identities=17%  Similarity=0.139  Sum_probs=101.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ..+.|+++.++|.||+|-.|..+.+++.+.+-  +|+++.|.+..-.++          ...+.-...|++    .+++.
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at----------~k~v~q~~vDf~----Kl~~~   77 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT----------DKVVAQVEVDFS----KLSQL   77 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc----------cceeeeEEechH----HHHHH
Confidence            33689999999999999999999999999986  699999875222211          113444556554    23333


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.    .+..+|+++++-|...-..-.     |.+   +.+..--.+.+.|.+     +.++-..++.+||..+..    
T Consensus        78 a~----~~qg~dV~FcaLgTTRgkaGa-----dgf---ykvDhDyvl~~A~~A-----Ke~Gck~fvLvSS~GAd~----  136 (238)
T KOG4039|consen   78 AT----NEQGPDVLFCALGTTRGKAGA-----DGF---YKVDHDYVLQLAQAA-----KEKGCKTFVLVSSAGADP----  136 (238)
T ss_pred             Hh----hhcCCceEEEeeccccccccc-----Cce---EeechHHHHHHHHHH-----HhCCCeEEEEEeccCCCc----
Confidence            33    334899999998865321111     111   111111123333433     444345889999877643    


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~  215 (280)
                      .....|--.|.-++.=+..|--+      ++..+.||++..+.+.
T Consensus       137 sSrFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  137 SSRFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGERTE  175 (238)
T ss_pred             ccceeeeeccchhhhhhhhcccc------EEEEecCcceeccccc
Confidence            45678988898887544433322      6788999998776544

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.68  E-value=0.00034  Score=54.23  Aligned_cols=76  Identities=25%  Similarity=0.457  Sum_probs=55.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++++++|+|+ |++|+++++.|.+.| .+|.+++|+.++.+++.+++....        +..+.. +.   .+.    
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--------~~~~~~-~~---~~~----   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--------IAIAYL-DL---EEL----   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--------cceeec-ch---hhc----
Confidence            467899999998 899999999999996 689999999888887776654210        122222 21   111    


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                         ....|++|+++...
T Consensus        79 ---~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 ---LAEADLIINTTPVG   92 (155)
T ss_pred             ---cccCCEEEeCcCCC
Confidence               24789999999764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.61  E-value=7.9e-05  Score=61.03  Aligned_cols=188  Identities=12%  Similarity=0.059  Sum_probs=112.2

Q ss_pred             CCC-CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH-HHHHHHh--hcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           16 QLD-NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS-LCDEINK--QSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        16 ~l~-~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~-~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..+ .|++||||=+|-=|..+|.-|+..|+.|.-+-|....... -.+.+..  ..-.+......-.|++ |...+.+++
T Consensus        24 ~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmT-Dss~L~k~I  102 (376)
T KOG1372|consen   24 AFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMT-DSSCLIKLI  102 (376)
T ss_pred             CcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeecccc-chHHHHHHH
Confidence            344 4599999999999999999999999999877665433211 1111110  0001234556678999 667888888


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc-----
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS-----  166 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~-----  166 (280)
                      +.+     +++-+.|.|+..+..     ++.+--+..-++...|+++++.+...+-...  +-++---|+..-+.     
T Consensus       103 ~~i-----kPtEiYnLaAQSHVk-----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv~e~  170 (376)
T KOG1372|consen  103 STI-----KPTEVYNLAAQSHVK-----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKVQEI  170 (376)
T ss_pred             hcc-----CchhhhhhhhhcceE-----EEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccccCC
Confidence            877     677777887765332     1222223344667789998888774433221  22333333322111     


Q ss_pred             ----CCCCCCCCCChhhHHHHHHHHHHHHHHh---CCCCeEEEEeecCcccCccccC
Q 023555          167 ----RGQLPGGVAYASSKAGLNAMTKCLSLEL---GVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       167 ----~~~~~~~~~Y~~sK~a~~~l~~~la~~~---~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                          ..|+.+.+.|+++|..---.+-.+...|   +-.||-+|.=+|--=++-.+++
T Consensus       171 PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRK  227 (376)
T KOG1372|consen  171 PQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRK  227 (376)
T ss_pred             CcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHH
Confidence                1244567899999976554444443333   4568888877775444433433

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.59  E-value=0.0025  Score=55.71  Aligned_cols=151  Identities=14%  Similarity=0.122  Sum_probs=97.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-------eEEEEecChhH--HHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRVDR--LKSLCDEINKQSGSS-VRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~~~--~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~   89 (280)
                      ++|.|+|++|.+|.+++..++..|.       .++|+|.++..  ++....++....... ..+   ... +++      
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~---~i~-~~~------   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEI---VIT-DDP------   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCce---EEe-cCc------
Confidence            5789999999999999999998877       69999985432  444444444322100 011   111 111      


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEecccc----
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAA----  164 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~----  164 (280)
                           .+.+...|++|..||...  ++  ..+..+   .++.    ...+++.+.+.+.+.. +.+.+|++|.-.-    
T Consensus        73 -----~~~~~daDivvitaG~~~--k~--g~tR~d---ll~~----N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~  136 (322)
T cd01338          73 -----NVAFKDADWALLVGAKPR--GP--GMERAD---LLKA----NGKIFTAQGKALNDVASRDVKVLVVGNPCNTNAL  136 (322)
T ss_pred             -----HHHhCCCCEEEEeCCCCC--CC--CCcHHH---HHHH----HHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH
Confidence                 123347899999999742  22  334443   3333    4456677888887766 3778888875221    


Q ss_pred             --ccCC-CCCCCCCChhhHHHHHHHHHHHHHHhCC
Q 023555          165 --TSRG-QLPGGVAYASSKAGLNAMTKCLSLELGV  196 (280)
Q Consensus       165 --~~~~-~~~~~~~Y~~sK~a~~~l~~~la~~~~~  196 (280)
                        .... .+|....|+.++.-...|...++..+.-
T Consensus       137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence              1112 2566678999999999999999999854

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.57  E-value=0.00033  Score=64.17  Aligned_cols=78  Identities=18%  Similarity=0.199  Sum_probs=52.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++|||+++ +|.++|+.|++.|++|++.+++........+++.+.   +  +.+.....   ...   ..+   
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~---g--~~~~~~~~---~~~---~~~---   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE---G--IKVICGSH---PLE---LLD---   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc---C--CEEEeCCC---CHH---Hhc---
Confidence            57899999999976 999999999999999999998764444444444332   1  11222111   111   111   


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                         ..+|.+|+++|+.
T Consensus        67 ---~~~d~vV~s~gi~   79 (447)
T PRK02472         67 ---EDFDLMVKNPGIP   79 (447)
T ss_pred             ---CcCCEEEECCCCC
Confidence               1489999999975

>cd00704 MDH Malate dehydrogenase

Probab=97.57  E-value=0.0013  Score=57.39  Aligned_cols=116  Identities=13%  Similarity=0.177  Sum_probs=69.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-------eEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++.|+|++|.+|.+++..|+..|.       .++++|+++  +.++....++.........    ...++          
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~----~~~i~----------   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLK----GVVIT----------   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccC----CcEEe----------
Confidence            589999999999999999998654       499999976  4332222222211000000    00000          


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEec
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-NQEGSVINISS  161 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~vv~vsS  161 (280)
                      ....+.+...|++|+.||...  .+  ..+..+   .+..    ...+++.+.+.+.+. ++.+.+|++|.
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~--~~--g~tR~d---ll~~----N~~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPR--KP--GMERAD---LLRK----NAKIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCC--Cc--CCcHHH---HHHH----hHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            112334458999999999742  21  334443   3333    445667788888776 36777887764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.53  E-value=0.0022  Score=53.17  Aligned_cols=151  Identities=19%  Similarity=0.181  Sum_probs=90.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      +..|++++|+|.|. ||+|..+++.|+..|. +++++|.+.                   .+.+...+.+.+.++ .+++
T Consensus         6 ~~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP-~~~V   83 (231)
T cd00755           6 LEKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP-ECEV   83 (231)
T ss_pred             HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC-CcEE
Confidence            34688999999988 7999999999999999 688888642                   244445555554443 4455


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQE  153 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  153 (280)
                      ..+...++  .+....++.      ...|++|.+....                      ..-..+.+.+    ++.  +
T Consensus        84 ~~~~~~i~--~~~~~~l~~------~~~D~VvdaiD~~----------------------~~k~~L~~~c----~~~--~  127 (231)
T cd00755          84 DAVEEFLT--PDNSEDLLG------GDPDFVVDAIDSI----------------------RAKVALIAYC----RKR--K  127 (231)
T ss_pred             EEeeeecC--HhHHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHH----HHh--C
Confidence            55554443  133333321      2577777765321                      1112233333    222  2


Q ss_pred             CeEEEEeccccccCCCCCC-CCCChhhHHHHHHHHHHHHHHhCCCCeE--EEEee
Q 023555          154 GSVINISSIAATSRGQLPG-GVAYASSKAGLNAMTKCLSLELGVHKIR--VNSIC  205 (280)
Q Consensus       154 g~vv~vsS~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~~gi~--vn~v~  205 (280)
                      -.+|...+.++.   ..|. ...-..+|.-...|++.+.+++.++|+.  +.+|.
T Consensus       128 ip~I~s~g~g~~---~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         128 IPVISSMGAGGK---LDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             CCEEEEeCCcCC---CCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            345554443332   2232 2344566777889999999999988885  55543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.51  E-value=0.002  Score=56.15  Aligned_cols=80  Identities=23%  Similarity=0.311  Sum_probs=55.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ..+++++|+|+++++|+++++.+...|++|+++++++++.+.+ ..+    +  ..   ...|.. +.+..+.+.+... 
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----~--~~---~~~~~~-~~~~~~~~~~~~~-  232 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL----G--AD---YVIDYR-KEDFVREVRELTG-  232 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----C--CC---eEEecC-ChHHHHHHHHHhC-
Confidence            3578999999999999999999999999999999988765543 221    1  11   123443 3333344333222 


Q ss_pred             HcCCccEEEECCC
Q 023555           97 AFGRIDALVNNAG  109 (280)
Q Consensus        97 ~~g~id~li~~ag  109 (280)
                       .+++|++++++|
T Consensus       233 -~~~~d~~i~~~g  244 (342)
T cd08266         233 -KRGVDVVVEHVG  244 (342)
T ss_pred             -CCCCcEEEECCc
Confidence             236999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.50  E-value=0.00054  Score=54.81  Aligned_cols=77  Identities=19%  Similarity=0.299  Sum_probs=47.1

Q ss_pred             CCCcEEEEecC----------------CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEecc
Q 023555           17 LDNKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV   80 (280)
Q Consensus        17 l~~k~vlItG~----------------~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   80 (280)
                      |+||+||||+|                ||..|.++|+.+..+|++|+++.... ....           ...+..+... 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~-----------p~~~~~i~v~-   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLPP-----------PPGVKVIRVE-   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S---------------TTEEEEE-S-
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-cccc-----------cccceEEEec-
Confidence            57999999985                68899999999999999999888763 2111           1134444442 


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                        .   .+++.+.+.+.+...|++|++|++.
T Consensus        68 --s---a~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   68 --S---AEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             --S---HHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             --c---hhhhhhhhccccCcceeEEEecchh
Confidence              2   3445555555555679999999875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK06849 hypothetical protein; Provisional

Probab=97.44  E-value=0.0011  Score=59.49  Aligned_cols=83  Identities=17%  Similarity=0.170  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +.|+|||||++..+|.++++.|.+.|++|++++.+........+.+.       ....+...-. +.+...+.+.++.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d-------~~~~~p~p~~-d~~~~~~~L~~i~~~   74 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD-------GFYTIPSPRW-DPDAYIQALLSIVQR   74 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh-------heEEeCCCCC-CHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998655443333332       2222221222 233333333344444


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      . ++|++|-...
T Consensus        75 ~-~id~vIP~~e   85 (389)
T PRK06849         75 E-NIDLLIPTCE   85 (389)
T ss_pred             c-CCCEEEECCh
Confidence            3 6899998764

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.44  E-value=0.00027  Score=57.41  Aligned_cols=47  Identities=19%  Similarity=0.331  Sum_probs=41.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~   62 (280)
                      .+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++++.++...+.
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            47899999999995 899999999999999999999998777666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.44  E-value=0.0013  Score=56.55  Aligned_cols=51  Identities=25%  Similarity=0.313  Sum_probs=45.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhc
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQS   67 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~   67 (280)
                      ++++|+++|.|+ ||.|++++..|++.|. +|.+++|+.++++.+.+.+....
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            567899999998 7899999999999998 69999999999999888886543

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.43  E-value=0.00041  Score=59.43  Aligned_cols=48  Identities=29%  Similarity=0.478  Sum_probs=43.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEIN   64 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~   64 (280)
                      ++++|+++|+|+ ||+|+++++.|++.| .+|++++|+.++++++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578999999997 899999999999999 689999999999888877764

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.42  E-value=0.0044  Score=52.48  Aligned_cols=147  Identities=12%  Similarity=0.114  Sum_probs=84.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChh-------------------HHHHHHHHHHhhcCCCcc
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVD-------------------RLKSLCDEINKQSGSSVR   72 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~-------------------~~~~~~~~~~~~~~~~~~   72 (280)
                      .+..|++.+|+|.|+ ||+|..+|+.|+..|. ++.++|.+.-                   +.+.+.+.+.+.++ .++
T Consensus        24 ~~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP-~~~  101 (268)
T PRK15116         24 ALQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINP-ECR  101 (268)
T ss_pred             HHHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCC-CcE
Confidence            355789999999987 7999999999999996 6888886521                   23333444443332 334


Q ss_pred             eEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Q 023555           73 AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ  152 (280)
Q Consensus        73 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  152 (280)
                      +..+.--++  .+..+.++.      .+.|++|.+....                      ..-..+.+.+    .+.  
T Consensus       102 V~~i~~~i~--~e~~~~ll~------~~~D~VIdaiD~~----------------------~~k~~L~~~c----~~~--  145 (268)
T PRK15116        102 VTVVDDFIT--PDNVAEYMS------AGFSYVIDAIDSV----------------------RPKAALIAYC----RRN--  145 (268)
T ss_pred             EEEEecccC--hhhHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHH----HHc--
Confidence            443322111  223333321      2467776665421                      1112233333    222  


Q ss_pred             CCeEEEEeccccccCCCCCC-CCCChhhHHHHHHHHHHHHHHhCC-CCeE
Q 023555          153 EGSVINISSIAATSRGQLPG-GVAYASSKAGLNAMTKCLSLELGV-HKIR  200 (280)
Q Consensus       153 ~g~vv~vsS~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~-~gi~  200 (280)
                      +-.+|.+++..+.   ..|. .-.-..+|.....|++.+.+++.+ +||+
T Consensus       146 ~ip~I~~gGag~k---~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        146 KIPLVTTGGAGGQ---IDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             CCCEEEECCcccC---CCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            2355655544432   2333 224456777888999999999987 5764

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.41  E-value=0.00035  Score=65.12  Aligned_cols=47  Identities=34%  Similarity=0.598  Sum_probs=42.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            578999999999 69999999999999999999999988888776654

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.34  E-value=0.0033  Score=54.94  Aligned_cols=114  Identities=14%  Similarity=0.147  Sum_probs=68.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-------eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHH-HH-HHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGA-AI-ENSV   91 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~-~~~~   91 (280)
                      ++.|+|++|.+|.+++..|+..|.       .++|+|+++...               +......|+.+ .. .. ....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------~a~g~~~Dl~d-~~~~~~~~~~   64 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------VLEGVVMELMD-CAFPLLDGVV   64 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------ccceeEeehhc-ccchhcCcee
Confidence            478999999999999999998555       489999865320               11122333331 11 00 0000


Q ss_pred             --HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEec
Q 023555           92 --QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-NQEGSVINISS  161 (280)
Q Consensus        92 --~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~vv~vsS  161 (280)
                        ....+.+...|++|+.||....  +  ..+   +.+.+..|    ..+++.+.+.+.+. ++.+.+|++|.
T Consensus        65 ~~~~~~~~~~~aDiVVitAG~~~~--~--~~t---r~~ll~~N----~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        65 PTHDPAVAFTDVDVAILVGAFPRK--E--GME---RRDLLSKN----VKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             ccCChHHHhCCCCEEEEcCCCCCC--C--CCc---HHHHHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence              0112344589999999997422  1  223   34444444    45667777777776 35678888775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.29  E-value=0.0015  Score=55.97  Aligned_cols=48  Identities=31%  Similarity=0.324  Sum_probs=42.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   64 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~   64 (280)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++.+.+.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            467999999987 9999999999999998 69999999999988887764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.29  E-value=0.0054  Score=56.66  Aligned_cols=44  Identities=18%  Similarity=0.123  Sum_probs=38.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      ...+.+|+|+|+ |.+|...+..+...|++|+++++++++++...
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae  205 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE  205 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            356889999998 89999999999999999999999998877543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.27  E-value=0.0028  Score=55.78  Aligned_cols=85  Identities=24%  Similarity=0.361  Sum_probs=62.1

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh---------------------hHHHHHHHHHHhhcCCCc
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---------------------DRLKSLCDEINKQSGSSV   71 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~---------------------~~~~~~~~~~~~~~~~~~   71 (280)
                      ...|++++|+|.|+ ||+|..+|+.|+..|. ++.++|++.                     .+.+.+.+.+.+.+ +.+
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in-p~v   96 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN-SEV   96 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC-CCc
Confidence            45789999999997 7899999999999998 789999863                     24555666666544 456


Q ss_pred             ceEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           72 RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        72 ~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      ++..+..|++ . +.+++++       .+.|++|.+..
T Consensus        97 ~i~~~~~~~~-~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         97 EIVPVVTDVT-V-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEEEeccCC-H-HHHHHHh-------cCCCEEEEcCC
Confidence            6777777765 2 3344433       36788888763

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.26  E-value=0.0043  Score=53.17  Aligned_cols=50  Identities=26%  Similarity=0.408  Sum_probs=43.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQ   66 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~   66 (280)
                      ++++|+++|.|+ ||-|++++..|++.|+ +|+++.|+.++++++.+.+...
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            467899999998 8999999999999998 6899999999999888877543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.19  E-value=0.0047  Score=50.27  Aligned_cols=86  Identities=22%  Similarity=0.325  Sum_probs=59.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC-------------------hhHHHHHHHHHHhhcCCCcc
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR-------------------VDRLKSLCDEINKQSGSSVR   72 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~   72 (280)
                      ....|++++|+|.|+ ||+|..+++.|+..|. ++.++|++                   ..+.+.+.+.+.+.++ .++
T Consensus        15 ~q~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~   92 (202)
T TIGR02356        15 GQQRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-DIQ   92 (202)
T ss_pred             HHHHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC-CCE
Confidence            455899999999995 8999999999999998 79999886                   2355666666665443 345


Q ss_pred             eEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           73 AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        73 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      +......+.  .+.+.++       +...|++|.+..
T Consensus        93 i~~~~~~i~--~~~~~~~-------~~~~D~Vi~~~d  120 (202)
T TIGR02356        93 VTALKERVT--AENLELL-------INNVDLVLDCTD  120 (202)
T ss_pred             EEEehhcCC--HHHHHHH-------HhCCCEEEECCC
Confidence            555554443  1233322       236888888763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.15  E-value=0.0028  Score=55.14  Aligned_cols=149  Identities=13%  Similarity=0.150  Sum_probs=76.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHH-h--CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEe-ccCCCHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAK-A--GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL-DVSANGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~-~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|.||+|++|++++..+.. .  +..+++.++++. .+...-.+...   . ....+.. +..    ++.+.     
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~---~-~~~~i~~~~~~----d~~~~-----   66 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI---P-TAVKIKGFSGE----DPTPA-----   66 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC---C-CCceEEEeCCC----CHHHH-----
Confidence            4789999999999999998855 2  446888888743 21111122211   0 0111111 111    11112     


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc----cc------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA----AT------  165 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~----~~------  165 (280)
                        ....|++|.++|.....    ..+.   .+.+..|....    +.+.+.|.+.+..+.|+++|.-.    ..      
T Consensus        67 --l~~~DiVIitaG~~~~~----~~~R---~dll~~N~~i~----~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~  133 (312)
T PRK05086         67 --LEGADVVLISAGVARKP----GMDR---SDLFNVNAGIV----KNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLK  133 (312)
T ss_pred             --cCCCCEEEEcCCCCCCC----CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHH
Confidence              23699999999975221    2232   33455565544    55556666655444445444322    01      


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhC
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                      ...++|..-..+..-.-...|...+|..+.
T Consensus       134 ~~sg~p~~rvig~~~Lds~R~~~~ia~~l~  163 (312)
T PRK05086        134 KAGVYDKNKLFGVTTLDVIRSETFVAELKG  163 (312)
T ss_pred             HhcCCCHHHEEeeecHHHHHHHHHHHHHhC
Confidence            111233322334432233456667777764

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.15  E-value=0.0023  Score=54.55  Aligned_cols=50  Identities=32%  Similarity=0.520  Sum_probs=44.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQ   66 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~   66 (280)
                      +.++++++|.|+ ||-+++++..|++.|. +|.++.|+.++++++.+.+.+.
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            567999999998 8999999999999996 6999999999999998888653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.11  E-value=0.0015  Score=55.64  Aligned_cols=48  Identities=31%  Similarity=0.585  Sum_probs=42.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHh
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   65 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   65 (280)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++++++.+++..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            56899999999 6999999999999999999999999888888777643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.11  E-value=0.0029  Score=57.16  Aligned_cols=47  Identities=17%  Similarity=0.347  Sum_probs=42.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++.+|+++|.|+ |++|+.+++.|++.|. +++++.|+.++++.+.+++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            688999999999 9999999999999997 6999999998888877665

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.09  E-value=0.014  Score=50.73  Aligned_cols=119  Identities=22%  Similarity=0.307  Sum_probs=70.6

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCe--EEEEecCh--hHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCR--IVAAARRV--DRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~--v~l~~r~~--~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++.|+|++|.+|..++..++..|..  |+++++++  +.++.....+.+..... ...   ....+.+   .+      
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d---~~------   68 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD---LS------   68 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC---HH------
Confidence            36899999999999999999999874  99999965  44544444443321100 011   1111211   11      


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                        .....|++|.++|...  .  .+.+..+   .++.|+    .+++.+.+.+.+....+.+|++++..
T Consensus        69 --~l~~aDiViitag~p~--~--~~~~r~d---l~~~n~----~i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          69 --DVAGSDIVIITAGVPR--K--EGMSRLD---LAKKNA----KIVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             --HhCCCCEEEEecCCCC--C--CCCCHHH---HHHHHH----HHHHHHHHHHHHHCCCeEEEEeCCch
Confidence              1237899999998742  1  1233332   333343    44455555665555567888888643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.09  E-value=0.0082  Score=52.64  Aligned_cols=77  Identities=22%  Similarity=0.367  Sum_probs=52.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |.++||+||+||+|...++.....|+.++++..+.++.+ .++++-.      .   ...|.. + ++   +.+++.+..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGA------d---~vi~y~-~-~~---~~~~v~~~t  207 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGA------D---HVINYR-E-ED---FVEQVRELT  207 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCC------C---EEEcCC-c-cc---HHHHHHHHc
Confidence            899999999999999999998899988777777776666 4444311      1   112222 2 11   444444333


Q ss_pred             C--CccEEEECCCC
Q 023555           99 G--RIDALVNNAGV  110 (280)
Q Consensus        99 g--~id~li~~ag~  110 (280)
                      +  .+|+++...|.
T Consensus       208 ~g~gvDvv~D~vG~  221 (326)
T COG0604         208 GGKGVDVVLDTVGG  221 (326)
T ss_pred             CCCCceEEEECCCH
Confidence            2  59999999875

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.09  E-value=0.0074  Score=51.21  Aligned_cols=116  Identities=16%  Similarity=0.276  Sum_probs=75.0

Q ss_pred             EEEecCCChhHHHHHHHHHHhC----CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAG----CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G----~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +.|.|++|.+|..++..|+..|    .+|+++|.+++.++....+++......   .....-.+++   ..+.       
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~---~~~~i~~~~d---~~~~-------   67 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL---ADIKVSITDD---PYEA-------   67 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc---cCcEEEECCc---hHHH-------
Confidence            4689998899999999999999    689999999988887777776543221   0011111212   1222       


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +...|++|..+|.....    ..+..+   .    +.....+.+.+.+.+.+..+.+.+|++|.
T Consensus        68 ~~~aDiVv~t~~~~~~~----g~~r~~---~----~~~n~~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          68 FKDADVVIITAGVGRKP----GMGRLD---L----LKRNVPIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             hCCCCEEEECCCCCCCc----CCCHHH---H----HHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            23789999999875321    223221   1    22344566777777777766778888764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02602 lactate dehydrogenase

Probab=97.09  E-value=0.036  Score=49.02  Aligned_cols=116  Identities=9%  Similarity=0.118  Sum_probs=76.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|.|+|+ |.+|.++|..++..|.  .++++|.+++.++....++.......... .+..+ . +.           +.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~-dy-----------~~  102 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-T-DY-----------AV  102 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-C-CH-----------HH
Confidence            69999996 9999999999998877  59999999887777777776543211111 11110 1 11           11


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +...|++|..||...  ++  ..+..++   +..    ...+++.+.+.+.+....+.+|+++.
T Consensus       103 ~~daDiVVitAG~~~--k~--g~tR~dl---l~~----N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        103 TAGSDLCIVTAGARQ--IP--GESRLNL---LQR----NVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             hCCCCEEEECCCCCC--Cc--CCCHHHH---HHH----HHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            247899999999742  21  3444433   333    44566777777777666788888875

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.07  E-value=0.0083  Score=53.51  Aligned_cols=77  Identities=25%  Similarity=0.354  Sum_probs=53.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +.+++++|.|+ |.+|+..++.+...|++|++++|+.++++.+...+    +.  .   +..+.. +.+.+.+.+     
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g~--~---v~~~~~-~~~~l~~~l-----  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----GG--R---IHTRYS-NAYEIEDAV-----  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----Cc--e---eEeccC-CHHHHHHHH-----
Confidence            56788999987 79999999999999999999999987766554432    11  1   122333 333333332     


Q ss_pred             HcCCccEEEECCCCC
Q 023555           97 AFGRIDALVNNAGVS  111 (280)
Q Consensus        97 ~~g~id~li~~ag~~  111 (280)
                        ...|++|++++..
T Consensus       229 --~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 --KRADLLIGAVLIP  241 (370)
T ss_pred             --ccCCEEEEccccC
Confidence              3679999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.07  E-value=0.022  Score=49.55  Aligned_cols=117  Identities=13%  Similarity=0.175  Sum_probs=76.9

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ..+|.|+|+ |.+|.++|..++..|.  .++|++.+++.++....+++...+..... -+..  +.+.   +        
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~-~v~~--~~dy---~--------   67 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNP-KIEA--DKDY---S--------   67 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCC-EEEE--CCCH---H--------
Confidence            357899996 9999999999998876  59999999887777777776654211111 1111  1121   1        


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      .+...|++|..+|...  .+  .++..+   .++.    ...+++.+.+.+.+....+.++++|.
T Consensus        68 ~~~~adivvitaG~~~--k~--g~~R~d---ll~~----N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          68 VTANSKVVIVTAGARQ--NE--GESRLD---LVQR----NVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             HhCCCCEEEECCCCCC--CC--CCCHHH---HHHH----HHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            1237899999999742  21  344443   3333    44556777777777776788888875

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.06  E-value=0.006  Score=53.68  Aligned_cols=86  Identities=23%  Similarity=0.342  Sum_probs=59.5

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh---------------------hHHHHHHHHHHhhcCCC
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---------------------DRLKSLCDEINKQSGSS   70 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~---------------------~~~~~~~~~~~~~~~~~   70 (280)
                      ....|++++|+|.|+ ||+|..+++.|+..|. ++.++|++.                     .+.+.+.+.+.+.. +.
T Consensus        18 ~Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in-p~   95 (339)
T PRK07688         18 GQQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN-SD   95 (339)
T ss_pred             HHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC-CC
Confidence            345889999999999 8999999999999999 799999863                     23444445554433 34


Q ss_pred             cceEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           71 VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        71 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      +++.....+++ . +.+..++       .+.|++|.+..
T Consensus        96 v~v~~~~~~~~-~-~~~~~~~-------~~~DlVid~~D  125 (339)
T PRK07688         96 VRVEAIVQDVT-A-EELEELV-------TGVDLIIDATD  125 (339)
T ss_pred             cEEEEEeccCC-H-HHHHHHH-------cCCCEEEEcCC
Confidence            56666666665 2 3333332       25788887753

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.05  E-value=0.022  Score=51.77  Aligned_cols=117  Identities=14%  Similarity=0.212  Sum_probs=78.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh-------CC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA-------GC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~-------G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      -+|.|+|++|.+|.++|..|+..       |.  ++++++++++.++....+++........-..+..   ++       
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~---~~-------  170 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI---DP-------  170 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec---CC-------
Confidence            37899999999999999999987       66  6999999999988888888764311111011111   11       


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCCeEEEEec
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRD-ANQEGSVINISS  161 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~g~vv~vsS  161 (280)
                          .+.+...|++|..+|..  .++  ..+..+   .++.|    ..+++...+.+.+ .+..+.||.+|.
T Consensus       171 ----ye~~kdaDiVVitAG~p--rkp--G~tR~d---Ll~~N----~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        171 ----YEVFQDAEWALLIGAKP--RGP--GMERAD---LLDIN----GQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ----HHHhCcCCEEEECCCCC--CCC--CCCHHH---HHHHH----HHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence                12334789999999974  222  344443   34444    4556777777777 466778888875

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.04  E-value=0.0036  Score=55.03  Aligned_cols=45  Identities=22%  Similarity=0.321  Sum_probs=38.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      -.|.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            358999999999999999999888899999999998877665543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.03  E-value=0.011  Score=49.52  Aligned_cols=79  Identities=22%  Similarity=0.287  Sum_probs=52.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .++++++|+|+++ +|+++++.+...|.+|+.+++++++.+.+ +++    +  ...   ..|.. +.+....+.   ..
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g--~~~---~~~~~-~~~~~~~~~---~~  197 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL----G--ADH---VIDYK-EEDLEEELR---LT  197 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh----C--Cce---eccCC-cCCHHHHHH---Hh
Confidence            4688999999998 99999999999999999999987665543 222    1  111   12222 212222222   22


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      ..+++|+++++++.
T Consensus       198 ~~~~~d~vi~~~~~  211 (271)
T cd05188         198 GGGGADVVIDAVGG  211 (271)
T ss_pred             cCCCCCEEEECCCC
Confidence            33579999998864

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.01  E-value=0.0064  Score=52.26  Aligned_cols=49  Identities=22%  Similarity=0.333  Sum_probs=40.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh---hHHHHHHHHHHh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---DRLKSLCDEINK   65 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~   65 (280)
                      ++++|+++|.|+ ||-+++++-.|+..|. +|.++.|+.   ++++++.+++..
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            578999999997 6669999999999998 699999985   477777766643

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.95  E-value=0.023  Score=62.01  Aligned_cols=178  Identities=17%  Similarity=0.193  Sum_probs=106.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+.++.++|++.+++++.+++..|.++|+.|+.+...+.... ....+      ...+-.+.+.-- +.+.+..+++.+.
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~ 1823 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSH-SASPL------ASAIASVTLGTI-DDTSIEAVIKDIE 1823 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccccc-ccccc------cccccccccccc-chHHHHHHHHhhh
Confidence            456888999988999999999999999999887743211000 00000      001112223322 4467777888877


Q ss_pred             HHcCCccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      ...+.++.+||..+..... .........+   .-...+...+.+.|.+.+.+.. .+.+.++.++...+..  ++....
T Consensus      1824 ~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~---~~~~~l~~~f~~ak~~~~~l~~-~~~~~~~~vsr~~G~~--g~~~~~ 1897 (2582)
T TIGR02813      1824 EKTAQIDGFIHLQPQHKSVADKVDAIELPE---AAKQSLMLAFLFAKLLNVKLAT-NARASFVTVSRIDGGF--GYSNGD 1897 (2582)
T ss_pred             ccccccceEEEeccccccccccccccccch---hhHHHHHHHHHHHHhhchhhcc-CCCeEEEEEEecCCcc--ccCCcc
Confidence            7778899999987654210 0111111111   1112233456677776666543 3356888888766433  211111


Q ss_pred             C--------ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecC
Q 023555          175 A--------YASSKAGLNAMTKCLSLELGVHKIRVNSICPG  207 (280)
Q Consensus       175 ~--------Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG  207 (280)
                      .        -....+++.+|+|+++.||-.-.+|...+.|.
T Consensus      1898 ~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1898 ADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            1        12357899999999999997666677777665

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.95  E-value=0.024  Score=49.57  Aligned_cols=116  Identities=16%  Similarity=0.184  Sum_probs=71.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-------eEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++.|+|++|.+|.+++..|...|.       .++++|.++  +.++....++.........-..+.   +          
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~----------   71 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT---T----------   71 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe---c----------
Confidence            688999999999999999998875       699999965  335555555544321110000011   1          


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEec
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINISS  161 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vsS  161 (280)
                       .-.+.+...|++|..||..  .++  ..+..+   .+..|    ..+++.+.+.+.+... .+.++++|.
T Consensus        72 -~~~~~~~daDvVVitAG~~--~k~--g~tR~d---ll~~N----a~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        72 -DPEEAFKDVDAALLVGAFP--RKP--GMERAD---LLSKN----GKIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             -ChHHHhCCCCEEEEeCCCC--CCC--CCcHHH---HHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence             1112334789999999974  221  344444   33444    4556777777777664 677777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.91  E-value=0.049  Score=47.62  Aligned_cols=126  Identities=12%  Similarity=0.127  Sum_probs=74.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++.+++.|.|+ |.+|..++..++..|. .|+++|.+++.++.....+..... ..... -+.  .+.+.   +     
T Consensus         3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~-~I~--~~~d~---~-----   70 (321)
T PTZ00082          3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNS-KVI--GTNNY---E-----   70 (321)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCe-EEE--ECCCH---H-----
Confidence            356689999995 8899999999999995 899999988754322222211110 01111 111  11121   1     


Q ss_pred             HHHHcCCccEEEECCCCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKS-PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                         .+...|++|..+|.....+. -.+.+.   .+.+..|+    .+.+.+.+.+.+..+++.+|++|...
T Consensus        71 ---~l~~aDiVI~tag~~~~~~~~~~~~~r---~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         71 ---DIAGSDVVIVTAGLTKRPGKSDKEWNR---DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             ---HhCCCCEEEECCCCCCCCCCCcCCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence               12378999999987532111 001133   33344453    46777778887766667888887633

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.90  E-value=0.019  Score=43.42  Aligned_cols=80  Identities=21%  Similarity=0.417  Sum_probs=57.4

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcceEEEEe
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRAMAVEL   78 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~   78 (280)
                      +++++|.|+ |++|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+..+ ..++.....
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-DVEVEAIPE   79 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-TSEEEEEES
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-ceeeeeeec
Confidence            578899887 8999999999999999 588888621                   356666677766554 556777777


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           79 DVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        79 D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      +++  .+...++++       ..|++|.+..
T Consensus        80 ~~~--~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   80 KID--EENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HCS--HHHHHHHHH-------TSSEEEEESS
T ss_pred             ccc--ccccccccc-------CCCEEEEecC
Confidence            774  244455543       6799988754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.90  E-value=0.038  Score=47.84  Aligned_cols=114  Identities=14%  Similarity=0.227  Sum_probs=74.6

Q ss_pred             EEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           22 VMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +.|.|+ |++|.+++..++..|  .++++++.+++.++....++.+........   ....+++   .        +.+.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~---~i~~~~~---~--------~~l~   65 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATG---TIVRGGD---Y--------ADAA   65 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCC---eEEECCC---H--------HHhC
Confidence            357786 679999999999998  579999999988888888877654321111   1111111   1        1224


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ..|++|..+|...  ++  ..+..+   .+..    ...+++.+.+.+++..+.+.+|++|.
T Consensus        66 ~aDiVIitag~p~--~~--~~~R~~---l~~~----n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          66 DADIVVITAGAPR--KP--GETRLD---LINR----NAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCCEEEEcCCCCC--CC--CCCHHH---HHHH----HHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            7899999999742  21  234433   2223    45566777777777776788888875

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.88  E-value=0.02  Score=49.96  Aligned_cols=44  Identities=27%  Similarity=0.332  Sum_probs=38.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      -.|++++|+|.+ |+|...++.....|++|+.++|++++++.+.+
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~  208 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK  208 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH
Confidence            459999999998 99998888888799999999999988876543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.87  E-value=0.0061  Score=50.48  Aligned_cols=75  Identities=23%  Similarity=0.411  Sum_probs=53.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH-HHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD-EINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +.++|.|+ |-+|+++|+.|.+.|++|++++++++..++... ++        .+..+.+|-+ +.+.++++      ..
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~--------~~~~v~gd~t-~~~~L~~a------gi   64 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL--------DTHVVIGDAT-DEDVLEEA------GI   64 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc--------ceEEEEecCC-CHHHHHhc------CC
Confidence            35666666 889999999999999999999999988777443 22        4667788887 43333222      11


Q ss_pred             CCccEEEECCCC
Q 023555           99 GRIDALVNNAGV  110 (280)
Q Consensus        99 g~id~li~~ag~  110 (280)
                      ...|++|-..|.
T Consensus        65 ~~aD~vva~t~~   76 (225)
T COG0569          65 DDADAVVAATGN   76 (225)
T ss_pred             CcCCEEEEeeCC
Confidence            256777776654

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=96.87  E-value=0.0011  Score=53.99  Aligned_cols=163  Identities=20%  Similarity=0.258  Sum_probs=99.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh-CCe-EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA-GCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~-G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +-+...+||||+-|-+|..+|+.|..+ |.. |++.+-.... +...    +      .--++-.|+- +.+++++++- 
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~----~------~GPyIy~DIL-D~K~L~eIVV-  107 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT----D------VGPYIYLDIL-DQKSLEEIVV-  107 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc----c------cCCchhhhhh-ccccHHHhhc-
Confidence            566789999999999999999998765 764 6665543221 1111    1      1224556666 4455555443 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec-cccccCC----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS-IAATSRG----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS-~~~~~~~----  168 (280)
                        +  .++|-+||-.+..+..+      +....-..++|..|..++++.+..       ..--||+-| +.++.+.    
T Consensus       108 --n--~RIdWL~HfSALLSAvG------E~NVpLA~~VNI~GvHNil~vAa~-------~kL~iFVPSTIGAFGPtSPRN  170 (366)
T KOG2774|consen  108 --N--KRIDWLVHFSALLSAVG------ETNVPLALQVNIRGVHNILQVAAK-------HKLKVFVPSTIGAFGPTSPRN  170 (366)
T ss_pred             --c--cccceeeeHHHHHHHhc------ccCCceeeeecchhhhHHHHHHHH-------cCeeEeecccccccCCCCCCC
Confidence              2  38999998775432211      112223468899999988887622       223344444 4444321    


Q ss_pred             CCC------CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEe-ecCcccC
Q 023555          169 QLP------GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSI-CPGLFKS  211 (280)
Q Consensus       169 ~~~------~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v-~pG~v~t  211 (280)
                      +.|      ....|+.||--.+-+-+.+...+   |+.+.++ -||.+..
T Consensus       171 PTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  171 PTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISA  217 (366)
T ss_pred             CCCCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCccccc
Confidence            111      35689999999998888887776   5555554 3565543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.84  E-value=0.0034  Score=49.41  Aligned_cols=42  Identities=24%  Similarity=0.355  Sum_probs=36.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   57 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~   57 (280)
                      +++||+++|.|++.-+|..+++.|.++|++|.++.|+.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~   82 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK   82 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence            799999999999777899999999999999999999754433

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.83  E-value=0.033  Score=48.64  Aligned_cols=121  Identities=17%  Similarity=0.175  Sum_probs=73.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+.+++.|+|+ |.+|..++..++..| ..++++|.+++.++....++............+..  +.+   .+ .     
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~--~~d---~~-~-----   70 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG--TNN---YE-D-----   70 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe--CCC---HH-H-----
Confidence            46778999997 889999999999999 68999999876654332222221100000011111  112   12 2     


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                        +...|++|..+|....  +  ..+..   +.+..|.    .+.+.+.+.|.+..+++.+|++|.-
T Consensus        71 --l~~ADiVVitag~~~~--~--g~~r~---dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         71 --IKDSDVVVITAGVQRK--E--EMTRE---DLLTING----KIMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             --hCCCCEEEECCCCCCC--C--CCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCh
Confidence              2378999999987421  1  23333   3445555    4667777888777666778888753

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.83  E-value=0.017  Score=48.52  Aligned_cols=85  Identities=15%  Similarity=0.213  Sum_probs=57.1

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ...|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+..+ .+++
T Consensus        27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp-~v~i  104 (245)
T PRK05690         27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINP-HIAI  104 (245)
T ss_pred             HHHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC-CCEE
Confidence            45789999999998 9999999999999998 588887632                   244555556655443 4455


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      ......++  .+....++       ...|++|.+..
T Consensus       105 ~~~~~~i~--~~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        105 ETINARLD--DDELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             EEEeccCC--HHHHHHHH-------hcCCEEEecCC
Confidence            55555543  12222222       36788887763

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.82  E-value=0.021  Score=52.72  Aligned_cols=86  Identities=17%  Similarity=0.151  Sum_probs=59.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC------------C
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA------------N   83 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~------------~   83 (280)
                      ...+.+++|.|+ |.+|...++.+...|++|++++++.++++.+.. +        ...++..|..+            .
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l--------Ga~~v~v~~~e~g~~~~gYa~~~s  230 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M--------GAEFLELDFKEEGGSGDGYAKVMS  230 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--------CCeEEeccccccccccccceeecC
Confidence            456789999996 999999999999999999999999887654432 2        12223333210            1


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                      .+..++..+...+.....|++|+++-+.
T Consensus       231 ~~~~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       231 EEFIAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECcccC
Confidence            2344444445555667899999999554

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.81  E-value=0.0073  Score=53.10  Aligned_cols=79  Identities=22%  Similarity=0.335  Sum_probs=52.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +.++||+|++|++|..+++.+...|+ +|+.+++++++.+.+.+++    +.  .. .+  |.. + ++..+.+.++.. 
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l----Ga--~~-vi--~~~-~-~~~~~~i~~~~~-  222 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL----GF--DA-AI--NYK-T-DNVAERLRELCP-  222 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc----CC--cE-EE--ECC-C-CCHHHHHHHHCC-
Confidence            38999999999999999988888899 7999999887766554433    21  11 11  222 1 222333333322 


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                       +++|+++.++|.
T Consensus       223 -~gvd~vid~~g~  234 (345)
T cd08293         223 -EGVDVYFDNVGG  234 (345)
T ss_pred             -CCceEEEECCCc
Confidence             469999988763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.78  E-value=0.0086  Score=51.53  Aligned_cols=81  Identities=20%  Similarity=0.307  Sum_probs=53.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .++++++|+|+++++|+++++.+...|++|++++++++..+.+ +++    +  ..   ...+.. ..+..+.+.+ ...
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g--~~---~~~~~~-~~~~~~~~~~-~~~  205 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----G--AD---VAINYR-TEDFAEEVKE-ATG  205 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----C--CC---EEEeCC-chhHHHHHHH-HhC
Confidence            3578999999999999999999999999999999987766554 322    1  11   112222 2222222222 211


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                       .+++|.+++++|.
T Consensus       206 -~~~~d~vi~~~g~  218 (323)
T cd05276         206 -GRGVDVILDMVGG  218 (323)
T ss_pred             -CCCeEEEEECCch
Confidence             2469999999873

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.76  E-value=0.005  Score=53.60  Aligned_cols=42  Identities=33%  Similarity=0.499  Sum_probs=37.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.+++|+|+++++|+++++.+...|++|+.+.++++..+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999887665543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.76  E-value=0.0017  Score=43.17  Aligned_cols=36  Identities=28%  Similarity=0.488  Sum_probs=23.8

Q ss_pred             CCCC-cEEEEecCCChhHHH--HHHHHHHhCCeEEEEecC
Q 023555           16 QLDN-KVVMVTGASSGLGRE--FCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        16 ~l~~-k~vlItG~~~giG~a--~a~~l~~~G~~v~l~~r~   52 (280)
                      .++| |+|||+|+|+|.|++  |+.+| ..|++.+-+...
T Consensus        35 ~~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   35 KINGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             --TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            3455 899999999999999  66666 678887777653

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.73  E-value=0.0084  Score=53.04  Aligned_cols=43  Identities=23%  Similarity=0.319  Sum_probs=37.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      .|.++||+|++|++|..+++.+...|++|+.+++++++.+.+.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~  200 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK  200 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            5889999999999999999988889999999998887766543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.72  E-value=0.0079  Score=52.50  Aligned_cols=79  Identities=23%  Similarity=0.368  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|.++||+|+++++|..+++.+...|++|+.+++++++.+.+ +++    +  .... +  |.. +.+...+.+....  
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l----G--a~~v-i--~~~-~~~~~~~~~~~~~--  204 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL----G--FDVA-F--NYK-TVKSLEETLKKAS--  204 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----C--CCEE-E--ecc-ccccHHHHHHHhC--
Confidence            588999999999999999998888899999999988766554 222    2  1111 1  211 1112333333332  


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      .+++|+++.+.|
T Consensus       205 ~~gvdvv~d~~G  216 (325)
T TIGR02825       205 PDGYDCYFDNVG  216 (325)
T ss_pred             CCCeEEEEECCC
Confidence            136899998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.72  E-value=0.0096  Score=54.05  Aligned_cols=47  Identities=28%  Similarity=0.479  Sum_probs=40.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++++.+.+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            588999999997 999999999999999 67999999988877666544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.71  E-value=0.0043  Score=52.30  Aligned_cols=75  Identities=16%  Similarity=0.234  Sum_probs=52.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++++|+|||+- |+.+++.|.+.|++|+...+++...+...+.         ....+..+.. +.+++.+++.+     .
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~---------g~~~v~~g~l-~~~~l~~~l~~-----~   64 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH---------QALTVHTGAL-DPQELREFLKR-----H   64 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc---------CCceEEECCC-CHHHHHHHHHh-----c
Confidence            36999999998 9999999999999999999987654433210         1122344444 44555555543     2


Q ss_pred             CccEEEECCCC
Q 023555          100 RIDALVNNAGV  110 (280)
Q Consensus       100 ~id~li~~ag~  110 (280)
                      ++|++|+.+..
T Consensus        65 ~i~~VIDAtHP   75 (256)
T TIGR00715        65 SIDILVDATHP   75 (256)
T ss_pred             CCCEEEEcCCH
Confidence            79999998854

This enzyme was found to be a monomer by gel filtration.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.71  E-value=0.019  Score=47.68  Aligned_cols=85  Identities=20%  Similarity=0.252  Sum_probs=58.1

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC-------------------hhHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR-------------------VDRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ...|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+..+ ..++
T Consensus        16 q~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~i   93 (228)
T cd00757          16 QEKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-DVEI   93 (228)
T ss_pred             HHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC-CCEE
Confidence            44788999999996 8999999999999999 57777652                   2355666666665543 3455


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      ..+..+++  .+...+++       ...|++|.+..
T Consensus        94 ~~~~~~i~--~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          94 EAYNERLD--AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             EEecceeC--HHHHHHHH-------hCCCEEEEcCC
Confidence            55555553  23333333       26888888764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.70  E-value=0.0045  Score=57.13  Aligned_cols=47  Identities=26%  Similarity=0.441  Sum_probs=41.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999999996 79999999999999999999999988877665543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.69  E-value=0.018  Score=47.18  Aligned_cols=84  Identities=21%  Similarity=0.288  Sum_probs=56.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecCh------------------hHHHHHHHHHHhhcCCCcceE
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV------------------DRLKSLCDEINKQSGSSVRAM   74 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~------------------~~~~~~~~~~~~~~~~~~~~~   74 (280)
                      ...|++++|+|.|+ ||+|..+++.|+..|.. +.++|.+.                  .+.+.+.+.+.+..+ .+++.
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp-~v~v~  100 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP-FVEIE  100 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC-CCEEE
Confidence            44788999999996 89999999999999995 89998862                  244445555544433 34555


Q ss_pred             EEEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 023555           75 AVELDVSANGAAIENSVQKAWEAFGRIDALVNNA  108 (280)
Q Consensus        75 ~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~a  108 (280)
                      .....++ . +...+++       .+.|++|.+.
T Consensus       101 ~~~~~i~-~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        101 AHNEKID-E-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             EEeeecC-H-HHHHHHH-------cCCCEEEECC
Confidence            5555554 2 2222222       3678777764

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.69  E-value=0.02  Score=50.83  Aligned_cols=66  Identities=24%  Similarity=0.210  Sum_probs=48.5

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcc
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVR   72 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~   72 (280)
                      ...+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++ .++
T Consensus        22 ~q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np-~v~   99 (355)
T PRK05597         22 GQQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP-DVK   99 (355)
T ss_pred             HHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC-CcE
Confidence            345789999999998 8999999999999999 588888742                   356666677765543 445


Q ss_pred             eEEEEecc
Q 023555           73 AMAVELDV   80 (280)
Q Consensus        73 ~~~~~~D~   80 (280)
                      +......+
T Consensus       100 v~~~~~~i  107 (355)
T PRK05597        100 VTVSVRRL  107 (355)
T ss_pred             EEEEEeec
Confidence            55444333

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.67  E-value=0.019  Score=51.47  Aligned_cols=48  Identities=31%  Similarity=0.535  Sum_probs=43.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   64 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~   64 (280)
                      ++++|++||.|+ |-+|.-+|++|+++|. +|+++.|+.++++++++++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            589999999998 7899999999999996 68999999999999888773

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.66  E-value=0.012  Score=53.59  Aligned_cols=47  Identities=34%  Similarity=0.562  Sum_probs=41.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++++.+.+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478999999987 9999999999999998 7999999988877766654

>PRK08223 hypothetical protein; Validated

Probab=96.66  E-value=0.014  Score=49.78  Aligned_cols=39  Identities=28%  Similarity=0.363  Sum_probs=34.2

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   52 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~   52 (280)
                      ....|++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        21 ~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         21 EQQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            455789999999988 7999999999999999 58888874

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.64  E-value=0.029  Score=46.20  Aligned_cols=42  Identities=26%  Similarity=0.512  Sum_probs=37.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~   62 (280)
                      ++.|.||+|.+|.++++.|++.|++|.+.+|++++.+.+.+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999999999999999999999999999998887766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.63  E-value=0.067  Score=46.54  Aligned_cols=114  Identities=14%  Similarity=0.133  Sum_probs=70.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|.|+ |.+|.++|..|+..|  ..|++++++++.++.....+........... +..  . +.           +..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~~--~-d~-----------~~l   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IYA--G-DY-----------ADC   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeE-Eee--C-CH-----------HHh
Confidence            4788898 899999999999999  5799999998777644444443221111111 111  1 21           123


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ...|++|..++...  .+  ..+..   +.+..    ...+++.+.+.+.+....|.+++++.
T Consensus        66 ~~aDiViita~~~~--~~--~~~r~---dl~~~----n~~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          66 KGADVVVITAGANQ--KP--GETRL---DLLKR----NVAIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CCCCEEEEccCCCC--CC--CCCHH---HHHHH----HHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            47899999998742  11  22332   23333    44556666677766666778887764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.63  E-value=0.033  Score=49.06  Aligned_cols=77  Identities=22%  Similarity=0.288  Sum_probs=51.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..+++++|+|+ |++|...++.+...|+ +|+++++++++++.+ +++    +.  ..   ..|.. + ++..+    ..
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l----Ga--~~---vi~~~-~-~~~~~----~~  230 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM----GA--DK---LVNPQ-N-DDLDH----YK  230 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc----CC--cE---EecCC-c-ccHHH----Hh
Confidence            46899999986 8999999998888899 588899988777644 333    21  11   12332 2 22222    22


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      +..+.+|++|.++|.
T Consensus       231 ~~~g~~D~vid~~G~  245 (343)
T PRK09880        231 AEKGYFDVSFEVSGH  245 (343)
T ss_pred             ccCCCCCEEEECCCC
Confidence            223569999999874

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.62  E-value=0.019  Score=51.37  Aligned_cols=84  Identities=26%  Similarity=0.354  Sum_probs=58.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC-------------------hhHHHHHHHHHHhhcCCCcceE
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR-------------------VDRLKSLCDEINKQSGSSVRAM   74 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~   74 (280)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.+++++                   ..+.+.+.+.+.+.++ .+++.
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~  208 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP-DVQVE  208 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC-CCEEE
Confidence            4688999999966 8999999999999999 68999986                   3466666667765543 34454


Q ss_pred             EEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           75 AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        75 ~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      .....+.  .+.+..+++       ..|++|++..
T Consensus       209 ~~~~~~~--~~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        209 AVQERVT--SDNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             EEeccCC--hHHHHHHHh-------CCCEEEECCC
Confidence            4444443  123333332       6788888874

>PRK14968 putative methyltransferase; Provisional

Probab=96.61  E-value=0.074  Score=42.28  Aligned_cols=80  Identities=14%  Similarity=0.116  Sum_probs=53.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+++++|-.|++.|.   ++..+++.+.+|+.++.+++..+...+.+....-....+.++.+|+.+.      +    .+
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~------~----~~   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP------F----RG   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc------c----cc
Confidence            467889999987776   5555666689999999998877777666644321111166777776521      1    11


Q ss_pred             HcCCccEEEECCCCC
Q 023555           97 AFGRIDALVNNAGVS  111 (280)
Q Consensus        97 ~~g~id~li~~ag~~  111 (280)
                        +.+|.++.|..+.
T Consensus        89 --~~~d~vi~n~p~~  101 (188)
T PRK14968         89 --DKFDVILFNPPYL  101 (188)
T ss_pred             --cCceEEEECCCcC
Confidence              2689999998764

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.60  E-value=0.023  Score=48.35  Aligned_cols=107  Identities=21%  Similarity=0.232  Sum_probs=73.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|.|++|++|+|..|.-+.+.---.|++|+-+.-.+++.+-+.+++    +..     .-.|-. . +   .+.+.+.+
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l----GfD-----~~idyk-~-~---d~~~~L~~  214 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL----GFD-----AGIDYK-A-E---DFAQALKE  214 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc----CCc-----eeeecC-c-c---cHHHHHHH
Confidence            45999999999999998777766668999999999988877666554    111     122333 2 2   23333333


Q ss_pred             Hc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           97 AF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        97 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      .. ..||+.+-|.|-.                           ++.++++.|..   .+||+.++-++++..
T Consensus       215 a~P~GIDvyfeNVGg~---------------------------v~DAv~~~ln~---~aRi~~CG~IS~YN~  256 (340)
T COG2130         215 ACPKGIDVYFENVGGE---------------------------VLDAVLPLLNL---FARIPVCGAISQYNA  256 (340)
T ss_pred             HCCCCeEEEEEcCCch---------------------------HHHHHHHhhcc---ccceeeeeehhhcCC
Confidence            33 3799999999852                           12356666654   589999998887753

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.56  E-value=0.027  Score=47.07  Aligned_cols=38  Identities=26%  Similarity=0.281  Sum_probs=33.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   52 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~   52 (280)
                      ...+++++|+|.|+ ||+|..+++.|+..|. ++.++|++
T Consensus        19 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        19 QEALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45788999999988 7999999999999998 58888874

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN00203 glutamyl-tRNA reductase

Probab=96.52  E-value=0.014  Score=54.17  Aligned_cols=47  Identities=28%  Similarity=0.535  Sum_probs=41.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.++++.+.+++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            388999999999 9999999999999997 6999999998888776654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.52  E-value=0.047  Score=47.43  Aligned_cols=150  Identities=16%  Similarity=0.198  Sum_probs=85.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|+|++|.+|.++|..++..|.  .++++|.+  .++....+++.... ..++.....|   +  +       ..+.+
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~-~~~i~~~~~~---~--~-------~y~~~   66 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT-PAKVTGYLGP---E--E-------LKKAL   66 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC-cceEEEecCC---C--c-------hHHhc
Confidence            688999999999999999998885  69999987  33333334433211 0111111010   0  0       11233


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc-------ccc---CC
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA-------ATS---RG  168 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~-------~~~---~~  168 (280)
                      ...|++|..||...  ++  ..+..+   .++.|..    +++...+.+.+..+.+.+|++|.-.       .+.   ..
T Consensus        67 ~daDivvitaG~~~--k~--g~tR~d---ll~~N~~----i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s  135 (310)
T cd01337          67 KGADVVVIPAGVPR--KP--GMTRDD---LFNINAG----IVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAG  135 (310)
T ss_pred             CCCCEEEEeCCCCC--CC--CCCHHH---HHHHHHH----HHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhc
Confidence            47899999999742  22  334433   4455544    4556666666666678888888754       111   12


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCC
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGV  196 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~  196 (280)
                      ++|..-..+..-.=-..|...++..+.-
T Consensus       136 ~~p~~rviG~~~LDs~R~~~~la~~l~v  163 (310)
T cd01337         136 VYDPKRLFGVTTLDVVRANTFVAELLGL  163 (310)
T ss_pred             CCCHHHEEeeechHHHHHHHHHHHHhCc
Confidence            3333234444322223566677777743

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.50  E-value=0.28  Score=41.63  Aligned_cols=192  Identities=15%  Similarity=0.147  Sum_probs=102.4

Q ss_pred             CcEEEEecCCChhHHHH--HHHHHHhCCeEEEEe--cChh---------HHHHHHHHHHhhcCCCcceEEEEeccCCCHH
Q 023555           19 NKVVMVTGASSGLGREF--CLDLAKAGCRIVAAA--RRVD---------RLKSLCDEINKQSGSSVRAMAVELDVSANGA   85 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~--a~~l~~~G~~v~l~~--r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (280)
                      -|.|||.|+++|.|.+.  +.+|. .|++.+-+.  |...         --....++...+.  +.-..-+..|.- +.+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k--GlyAksingDaF-S~e  116 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK--GLYAKSINGDAF-SDE  116 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc--Cceeeecccchh-hHH
Confidence            58999999999999874  44444 566654332  2111         0112222222221  222344677876 557


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCC---------------------------------CCCCCCHHHHHHHHHhh
Q 023555           86 AIENSVQKAWEAFGRIDALVNNAGVSGAVK---------------------------------SPLDLTEEEWNHIMKTN  132 (280)
Q Consensus        86 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~---------------------------------~~~~~~~~~~~~~~~~n  132 (280)
                      .-++.++.+++.+|.+|.+|+.-+-.....                                 .+..-+.+++.....|.
T Consensus       117 ~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VM  196 (398)
T COG3007         117 MKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVM  196 (398)
T ss_pred             HHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhh
Confidence            888899999999999999997653210000                                 01111223333322221


Q ss_pred             hhHHHHH-HHHHHH--HHHhcCCCCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc
Q 023555          133 LTGSWLV-SKYVCI--RMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF  209 (280)
Q Consensus       133 ~~~~~~l-~~~~~~--~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v  209 (280)
                      =---|.+ +++++.  .+.   .+.+-|-.|-.......+..-....+.+|.=++.-++.+...++..|=+.+....-.+
T Consensus       197 GGeDWq~WidaLl~advla---eg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKav  273 (398)
T COG3007         197 GGEDWQMWIDALLEADVLA---EGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAV  273 (398)
T ss_pred             CcchHHHHHHHHHhccccc---cCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHH
Confidence            1111111 122211  111   1345555555444332233334677899999999999999998876556655544445


Q ss_pred             cCccccCc
Q 023555          210 KSEITEGL  217 (280)
Q Consensus       210 ~t~~~~~~  217 (280)
                      -|.-...+
T Consensus       274 VTqASsaI  281 (398)
T COG3007         274 VTQASSAI  281 (398)
T ss_pred             Hhhhhhcc
Confidence            45444333

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.49  E-value=0.099  Score=46.75  Aligned_cols=117  Identities=15%  Similarity=0.195  Sum_probs=73.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-e----EEE----EecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-R----IVA----AARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~----v~l----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      -+|.|+|++|.+|.++|..++..|. .    |.+    ++++.+.++....++.+.......-..+..   ++       
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~-------  114 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DP-------  114 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CC-------
Confidence            4799999999999999999998866 2    344    488888888777777664311111011111   11       


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCCeEEEEec
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRD-ANQEGSVINISS  161 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~g~vv~vsS  161 (280)
                          .+.+...|++|..||..  .++  ..+..+   .++.|    ..+++.+.+.+.+ .++.+.+|++|.
T Consensus       115 ----y~~~kdaDIVVitAG~p--rkp--g~tR~d---ll~~N----~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       115 ----YEVFEDADWALLIGAKP--RGP--GMERAD---LLDIN----GQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             ----HHHhCCCCEEEECCCCC--CCC--CCCHHH---HHHHH----HHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence                12334789999999974  222  334433   34444    4556677777766 335677887775

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.47  E-value=0.012  Score=50.42  Aligned_cols=37  Identities=27%  Similarity=0.405  Sum_probs=34.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      +++||.++|.|.++-.|+.++..|.++|++|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            7899999999998889999999999999998888774

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.45  E-value=0.035  Score=49.55  Aligned_cols=63  Identities=25%  Similarity=0.335  Sum_probs=46.2

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC-------------------hhHHHHHHHHHHhhcCCCcc
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR-------------------VDRLKSLCDEINKQSGSSVR   72 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~   72 (280)
                      ....+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.++ .++
T Consensus        35 ~q~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np-~v~  112 (370)
T PRK05600         35 QQERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP-DIR  112 (370)
T ss_pred             HHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC-CCe
Confidence            345788999999988 7999999999999998 68898874                   2356666666665543 334


Q ss_pred             eEEEE
Q 023555           73 AMAVE   77 (280)
Q Consensus        73 ~~~~~   77 (280)
                      +....
T Consensus       113 i~~~~  117 (370)
T PRK05600        113 VNALR  117 (370)
T ss_pred             eEEee
Confidence            44443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.44  E-value=0.04  Score=44.74  Aligned_cols=38  Identities=26%  Similarity=0.517  Sum_probs=34.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   52 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~   52 (280)
                      ...|+.++|+|.|+ ||+|..+|+.|+..|. +++++|++
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            44788999999998 7999999999999999 69999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.42  E-value=0.16  Score=44.01  Aligned_cols=117  Identities=16%  Similarity=0.174  Sum_probs=69.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++.|.|+ |.+|..+|..++..|. .|++++++++.++....++..........  .....+.+   .+        .+
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~--~~i~~~~d---~~--------~~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFD--TKITGTND---YE--------DI   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCC--cEEEeCCC---HH--------HH
Confidence            57899998 8999999999999875 89999998877655444443321110000  01111111   11        12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ...|++|..+|...  ++  ..+..+   .+.    ....+.+.+.+.+.+...++.+|+++.
T Consensus        69 ~~aDiVii~~~~p~--~~--~~~r~~---~~~----~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         69 AGSDVVVITAGVPR--KP--GMSRDD---LLG----INAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCCCEEEECCCCCC--Cc--CCCHHH---HHH----HHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            37899999998642  21  223322   222    334566667777766555667777764

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.42  E-value=0.19  Score=43.70  Aligned_cols=149  Identities=13%  Similarity=0.141  Sum_probs=87.3

Q ss_pred             EEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCC--cceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSS--VRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +.|.|+ |.+|.++|..++..|.  .++++|.+++.++....++.......  ..+... .  . +           .+.
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~-~-----------y~~   65 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--G-D-----------YDD   65 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--C-C-----------HHH
Confidence            678888 9999999999998877  59999999887777677776533211  112111 1  1 2           122


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc------CCCCC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS------RGQLP  171 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~------~~~~~  171 (280)
                      +...|++|..||...  ++  ..+.+ -.+.++.    ...+++.+.+.+.+....+.+|.+|.-.-..      ..++|
T Consensus        66 ~~~aDivvitaG~~~--kp--g~tr~-R~dll~~----N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~k~sg~p  136 (307)
T cd05290          66 CADADIIVITAGPSI--DP--GNTDD-RLDLAQT----NAKIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFDYP  136 (307)
T ss_pred             hCCCCEEEECCCCCC--CC--CCCch-HHHHHHH----HHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHHHHhCcC
Confidence            347899999999742  22  23311 1223333    4567788888888877667777776532110      01223


Q ss_pred             CCCCChh-hHHHHHHHHHHHHHHhC
Q 023555          172 GGVAYAS-SKAGLNAMTKCLSLELG  195 (280)
Q Consensus       172 ~~~~Y~~-sK~a~~~l~~~la~~~~  195 (280)
                      ..-..+. +-.=...|-..+|..+.
T Consensus       137 ~~rviG~gt~LDs~R~~~~la~~l~  161 (307)
T cd05290         137 ANKVIGTGTMLDTARLRRIVADKYG  161 (307)
T ss_pred             hhheecccchHHHHHHHHHHHHHhC
Confidence            3223333 22233455666777764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.41  E-value=0.032  Score=41.53  Aligned_cols=76  Identities=25%  Similarity=0.411  Sum_probs=55.0

Q ss_pred             EEEEecCCChhHHHHHHHHHH-hCCeE-EEEecCh----------------------hHHHHHHHHHHhhcCCCcceEEE
Q 023555           21 VVMVTGASSGLGREFCLDLAK-AGCRI-VAAARRV----------------------DRLKSLCDEINKQSGSSVRAMAV   76 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~-~G~~v-~l~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~~   76 (280)
                      +|+|.|++|..|+.+++.+.+ .|.++ ..++|+.                      ..++++.++           .-+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----------~DV   70 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----------ADV   70 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------------SE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----------CCE
Confidence            589999999999999999999 67775 4666765                      233333322           115


Q ss_pred             EeccCCCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 023555           77 ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        77 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~  110 (280)
                      ..|+| ..+.+...++.+.++  ++.+++-.+|+
T Consensus        71 vIDfT-~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   71 VIDFT-NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEEES--HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEEcC-ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            67888 788888888888887  78889888886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.40  E-value=0.013  Score=50.48  Aligned_cols=78  Identities=23%  Similarity=0.270  Sum_probs=60.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      -..++|-||+|..|.-+|++|+.+|.+-.+.+|+..++..+...+...      .-...+.   .+..++++++      
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~------~~~~p~~---~p~~~~~~~~------   70 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE------AAVFPLG---VPAALEAMAS------   70 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc------ccccCCC---CHHHHHHHHh------
Confidence            457899999999999999999999999999999999999888877432      2222332   2344444444      


Q ss_pred             CCccEEEECCCCCC
Q 023555           99 GRIDALVNNAGVSG  112 (280)
Q Consensus        99 g~id~li~~ag~~~  112 (280)
                       ..++|+|++|.+.
T Consensus        71 -~~~VVlncvGPyt   83 (382)
T COG3268          71 -RTQVVLNCVGPYT   83 (382)
T ss_pred             -cceEEEecccccc
Confidence             6899999999763

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.39  E-value=0.022  Score=50.24  Aligned_cols=81  Identities=25%  Similarity=0.286  Sum_probs=53.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      --+|+.+||.||+||+|.+.++.....|+..++++++.++.+- .+++    +..     ...|.. +    .+.++++.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l-~k~l----GAd-----~vvdy~-~----~~~~e~~k  219 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL-VKKL----GAD-----EVVDYK-D----ENVVELIK  219 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH-HHHc----CCc-----EeecCC-C----HHHHHHHH
Confidence            3468899999999999999999888889666666666655443 3333    211     233444 3    23333333


Q ss_pred             HH-cCCccEEEECCCCC
Q 023555           96 EA-FGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~-~g~id~li~~ag~~  111 (280)
                      +. .+++|+++-+.|..
T Consensus       220 k~~~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  220 KYTGKGVDVVLDCVGGS  236 (347)
T ss_pred             hhcCCCccEEEECCCCC
Confidence            32 56899999999863

>PRK05442 malate dehydrogenase; Provisional

Probab=96.37  E-value=0.067  Score=46.84  Aligned_cols=116  Identities=12%  Similarity=0.133  Sum_probs=70.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-------eEEEEecChh--HHHHHHHHHHhhc-CCCcceEEEEeccCCCHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRVD--RLKSLCDEINKQS-GSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      +++.|+|++|.+|.++|..++..|.       .++|+|.++.  .++....++.... .....+. +..           
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i~~-----------   72 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-ITD-----------   72 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-Eec-----------
Confidence            4789999999999999999988665       6899998542  3444444443322 1000111 111           


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEec
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISS  161 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS  161 (280)
                         ...+.+...|++|-.||..  .++  ..+..+   .++.|    ..+++.+.+.+.+.. ..+.+|++|.
T Consensus        73 ---~~y~~~~daDiVVitaG~~--~k~--g~tR~d---ll~~N----a~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         73 ---DPNVAFKDADVALLVGARP--RGP--GMERKD---LLEAN----GAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ---ChHHHhCCCCEEEEeCCCC--CCC--CCcHHH---HHHHH----HHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence               1123345789999999974  222  334443   33444    456677777777733 4677777774

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.37  E-value=0.01  Score=51.06  Aligned_cols=42  Identities=24%  Similarity=0.347  Sum_probs=37.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   58 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~   58 (280)
                      .+.||+++|+|. |++|+++++.|...|++|++++|+.++.+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            688999999999 779999999999999999999999876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.36  E-value=0.1  Score=46.05  Aligned_cols=42  Identities=24%  Similarity=0.395  Sum_probs=36.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -.|++++|.|+ |++|..++..+...|++|+++++++++++.+
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            34899999999 9999999999999999999999988877644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.35  E-value=0.024  Score=51.84  Aligned_cols=77  Identities=19%  Similarity=0.249  Sum_probs=53.1

Q ss_pred             CCCCcEEEEecC----------------CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEec
Q 023555           16 QLDNKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD   79 (280)
Q Consensus        16 ~l~~k~vlItG~----------------~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (280)
                      +|+||++|||+|                ||-.|.++|+++..+|++|.+++-.-. +       .  .+.  .+..+..+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~--~p~--~v~~i~V~  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A--DPQ--GVKVIHVE  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C--CCC--CceEEEec
Confidence            699999999986                578999999999999999988874321 0       0  111  23333332


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           80 VSANGAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                            +.+++.+.+.+.+. .|++|++|++.
T Consensus       321 ------ta~eM~~av~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        321 ------SARQMLAAVEAALP-ADIAIFAAAVA  345 (475)
T ss_pred             ------CHHHHHHHHHhhCC-CCEEEEecccc
Confidence                  23445555555443 79999999874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.35  E-value=0.028  Score=48.20  Aligned_cols=75  Identities=12%  Similarity=0.175  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++.|+|++| +|.--++.--..|++|+.+++...+.++..+.+..      ..   -+|.+.+.+.++++.+     
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA------d~---fv~~~~d~d~~~~~~~-----  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA------DV---FVDSTEDPDIMKAIMK-----  245 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc------ce---eEEecCCHHHHHHHHH-----
Confidence            799999999987 99766665556799999999998888887776632      22   2344445555555555     


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                        ..|.+++.+.
T Consensus       246 --~~dg~~~~v~  255 (360)
T KOG0023|consen  246 --TTDGGIDTVS  255 (360)
T ss_pred             --hhcCcceeee
Confidence              3466666554

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.34  E-value=0.026  Score=49.16  Aligned_cols=47  Identities=34%  Similarity=0.487  Sum_probs=40.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++.+++++|.|+ |.+|+.+++.|...|. +|++++|+.++.+++.+++
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            378999999987 9999999999998775 6899999998887776664

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.34  E-value=0.024  Score=49.27  Aligned_cols=117  Identities=17%  Similarity=0.231  Sum_probs=70.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|+|++|.+|.++|..|+..|.  .++++|.++  ++....++....   .......+. . + ++       ..+.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~---~~~~i~~~~-~-~-~~-------~~~~~   65 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP---TAASVKGFS-G-E-EG-------LENAL   65 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC---cCceEEEec-C-C-Cc-------hHHHc
Confidence            478999999999999999998876  699999876  222222232211   001111000 0 0 00       12234


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      ...|++|..+|...  .+  ..+..   +.+..|+.    +++.+.+.+.+....+.+|++|.-.
T Consensus        66 ~daDivvitaG~~~--~~--g~~R~---dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        66 KGADVVVIPAGVPR--KP--GMTRD---DLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CCCCEEEEeCCCCC--CC--CccHH---HHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            58899999999742  22  23333   34555555    6677777777766678888887644

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.32  E-value=0.021  Score=49.67  Aligned_cols=43  Identities=23%  Similarity=0.380  Sum_probs=37.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -.|.++||+||++++|..+++.....|++|+.+++++++.+.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3588999999999999999998888999999999988766554

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.32  E-value=0.02  Score=52.47  Aligned_cols=40  Identities=20%  Similarity=0.385  Sum_probs=35.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      .++|.|+ |.+|+++++.|.+.|..|++++++++..+.+.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~   41 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD   41 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            5888887 999999999999999999999999887766543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.31  E-value=0.017  Score=46.02  Aligned_cols=44  Identities=25%  Similarity=0.342  Sum_probs=37.3

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   57 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~   57 (280)
                      ....+.||++.|.|- |.||+++|+.+...|++|+..+|+.....
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            445899999999987 99999999999999999999999876544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.28  E-value=0.056  Score=49.39  Aligned_cols=41  Identities=22%  Similarity=0.436  Sum_probs=35.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      ++.|.||.|.+|.++++.|.+.|++|.+++|+++...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            68999999999999999999999999999999776544433

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.28  E-value=0.029  Score=48.46  Aligned_cols=41  Identities=22%  Similarity=0.352  Sum_probs=36.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   57 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~   57 (280)
                      .+.+++++|.|. |++|+.+++.|...|++|.+++|+.+..+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            567999999997 77999999999999999999999976544

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.27  E-value=0.026  Score=48.62  Aligned_cols=41  Identities=20%  Similarity=0.344  Sum_probs=36.8

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   58 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~   58 (280)
                      ++++++|+|+++++|.++++.+...|++|+++.++++..+.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAA  179 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            58899999999999999999999999999999998776553

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK08328 hypothetical protein; Provisional

Probab=96.26  E-value=0.054  Score=45.03  Aligned_cols=39  Identities=33%  Similarity=0.442  Sum_probs=33.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV   53 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~   53 (280)
                      ...+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        22 q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         22 QEKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            44788999999988 7999999999999999 588888653

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.23  E-value=0.017  Score=46.04  Aligned_cols=44  Identities=27%  Similarity=0.395  Sum_probs=36.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   65 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   65 (280)
                      +|.|.|+ |.+|+.+|..|+..|++|.+.+++++.++...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 9999999999999999999999999988777776654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.21  E-value=0.02  Score=53.90  Aligned_cols=37  Identities=22%  Similarity=0.199  Sum_probs=32.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   52 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~   52 (280)
                      ..+++.+|||.|+ ||+|..+|+.|+..|. +++++|.+
T Consensus       334 ekL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       334 ERYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             HHHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4788999999998 8999999999999999 58888863

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.18  E-value=0.081  Score=46.36  Aligned_cols=42  Identities=19%  Similarity=0.268  Sum_probs=35.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~   59 (280)
                      ..|.+++|+|+ |++|..++..+...|++ |+++++++++.+.+
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~  204 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA  204 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            45899999976 89999999999899999 99999988776544

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.16  E-value=0.1  Score=45.19  Aligned_cols=151  Identities=16%  Similarity=0.231  Sum_probs=85.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +.|.|+|+ |+||+++|..|+.++.  .+++++.+++.++-...++.........-..+..| . +           .+.
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~-~-----------y~~   66 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-G-D-----------YED   66 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-C-C-----------hhh
Confidence            46889999 9999999999988766  59999999766655555554322111011111111 0 0           122


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc------cCCCCC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT------SRGQLP  171 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~------~~~~~~  171 (280)
                      +...|++|-.||...  +|  .++..+   .++.|.    .+++.+.+.+.+....+.++.++.-.-.      ...++|
T Consensus        67 ~~~aDiVvitAG~pr--Kp--GmtR~D---Ll~~Na----~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~~k~sg~p  135 (313)
T COG0039          67 LKGADIVVITAGVPR--KP--GMTRLD---LLEKNA----KIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIAMKFSGFP  135 (313)
T ss_pred             hcCCCEEEEeCCCCC--CC--CCCHHH---HHHhhH----HHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHHHHhcCCC
Confidence            347899999999752  22  245544   444454    3445555666665556777777652211      011223


Q ss_pred             CCC-CChhhHHHHHHHHHHHHHHhC
Q 023555          172 GGV-AYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       172 ~~~-~Y~~sK~a~~~l~~~la~~~~  195 (280)
                      ... .-+.+..-...|-..+|.++.
T Consensus       136 ~~rvig~gt~LDsaR~~~~lae~~~  160 (313)
T COG0039         136 KNRVIGSGTVLDSARFRTFLAEKLG  160 (313)
T ss_pred             ccceecccchHHHHHHHHHHHHHhC
Confidence            222 233344444566667777774

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.13  E-value=0.017  Score=43.98  Aligned_cols=40  Identities=25%  Similarity=0.355  Sum_probs=36.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      +++||.++|.|.+.-+|+.++..|.++|+.|.++.++...
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~   64 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQ   64 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcC
Confidence            7999999999999999999999999999999999865433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.10  E-value=0.076  Score=43.04  Aligned_cols=38  Identities=32%  Similarity=0.450  Sum_probs=32.4

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecC
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR   52 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~   52 (280)
                      ...+++.+|+|.|++ |+|.++++.|+..|.. +.++|.+
T Consensus        14 q~~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          14 QNKLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            447889999999885 5999999999999995 8888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.09  E-value=0.035  Score=47.93  Aligned_cols=42  Identities=26%  Similarity=0.363  Sum_probs=37.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      ++++++|+|+++++|+++++.+...|++|+.++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999999987765554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.08  E-value=0.036  Score=40.43  Aligned_cols=71  Identities=24%  Similarity=0.394  Sum_probs=49.5

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRI  101 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i  101 (280)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.+.         ...++.+|.+ +.+.++++      ...+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~---------~~~~i~gd~~-~~~~l~~a------~i~~a   63 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE---------GVEVIYGDAT-DPEVLERA------GIEKA   63 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT---------TSEEEES-TT-SHHHHHHT------TGGCE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc---------ccccccccch-hhhHHhhc------Ccccc
Confidence            467777 6899999999999887999999998886665432         2567889998 54433333      12367


Q ss_pred             cEEEECCC
Q 023555          102 DALVNNAG  109 (280)
Q Consensus       102 d~li~~ag  109 (280)
                      +.+|....
T Consensus        64 ~~vv~~~~   71 (116)
T PF02254_consen   64 DAVVILTD   71 (116)
T ss_dssp             SEEEEESS
T ss_pred             CEEEEccC
Confidence            77776654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.07  E-value=0.08  Score=41.96  Aligned_cols=32  Identities=31%  Similarity=0.458  Sum_probs=27.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCe-EEEEecCh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV   53 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~   53 (280)
                      +|+|.|+ ||+|..+++.|+..|.. +.++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678886 89999999999999995 99999864

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.07  E-value=0.046  Score=47.51  Aligned_cols=42  Identities=21%  Similarity=0.267  Sum_probs=37.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.+++|.|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~  186 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL  186 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999888766544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK04148 hypothetical protein; Provisional

Probab=96.02  E-value=0.025  Score=42.59  Aligned_cols=54  Identities=13%  Similarity=0.085  Sum_probs=42.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      +++.+++.|.+  -|.++|..|++.|++|+.+|.++...+.+.+.         .+.++..|+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~---------~~~~v~dDlf~   69 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL---------GLNAFVDDLFN   69 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---------CCeEEECcCCC
Confidence            56789999987  77789999999999999999999876655332         35667788874

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.94  E-value=0.023  Score=42.46  Aligned_cols=91  Identities=19%  Similarity=0.179  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcC-----CCcceEEEEeccCCCHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSG-----SSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..-++-|.|+ |.+|.++++.|.+.|+.|..+ +|+.++.+.+.+.+....-     .-.....+-+-+.|  +.+..+.
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD--daI~~va   85 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD--DAIAEVA   85 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C--CHHHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech--HHHHHHH
Confidence            3457888888 899999999999999998765 5776666666554422100     00123344444443  5788888


Q ss_pred             HHHHHH--cCCccEEEECCCCC
Q 023555           92 QKAWEA--FGRIDALVNNAGVS  111 (280)
Q Consensus        92 ~~~~~~--~g~id~li~~ag~~  111 (280)
                      +++...  +.+=.+++|+.|-.
T Consensus        86 ~~La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   86 EQLAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHHHCC--S-TT-EEEES-SS-
T ss_pred             HHHHHhccCCCCcEEEECCCCC
Confidence            888765  44446899999875

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.93  E-value=0.085  Score=46.00  Aligned_cols=39  Identities=18%  Similarity=0.182  Sum_probs=34.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ...+.||++.|.|- |.||+++|+.+...|++|+..++..
T Consensus       142 ~~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~  180 (314)
T PRK06932        142 ITDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKG  180 (314)
T ss_pred             ccccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCc
Confidence            34799999999998 8999999999999999999888753

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.92  E-value=0.11  Score=40.62  Aligned_cols=88  Identities=18%  Similarity=0.230  Sum_probs=53.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCC----cceEEEEeccCCCHHHHHHHHHH--
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS----VRAMAVELDVSANGAAIENSVQK--   93 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~--   93 (280)
                      ++|-+.|- |-.|..+|+.|+++|++|.+.+|++++.+++.+.--....+.    .....+-.=+. +.+.+++++..  
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~-~~~~v~~v~~~~~   79 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVP-DDDAVEAVLFGEN   79 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SS-SHHHHHHHHHCTT
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecc-cchhhhhhhhhhH
Confidence            46677777 799999999999999999999999988777654310000000    01233333344 55667777776  


Q ss_pred             HHHHcCCccEEEECCC
Q 023555           94 AWEAFGRIDALVNNAG  109 (280)
Q Consensus        94 ~~~~~g~id~li~~ag  109 (280)
                      +.....+=.++|....
T Consensus        80 i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   80 ILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HGGGS-TTEEEEE-SS
T ss_pred             HhhccccceEEEecCC
Confidence            5555444455665543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07411 hypothetical protein; Validated

Probab=95.92  E-value=0.068  Score=48.07  Aligned_cols=66  Identities=27%  Similarity=0.280  Sum_probs=47.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ..+|++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++ .+++
T Consensus        33 q~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np-~v~v  110 (390)
T PRK07411         33 QKRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINP-YCQV  110 (390)
T ss_pred             HHHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCC-CCeE
Confidence            44788999999988 7999999999999999 588887631                   255666666665543 4455


Q ss_pred             EEEEeccC
Q 023555           74 MAVELDVS   81 (280)
Q Consensus        74 ~~~~~D~~   81 (280)
                      ..+...++
T Consensus       111 ~~~~~~~~  118 (390)
T PRK07411        111 DLYETRLS  118 (390)
T ss_pred             EEEecccC
Confidence            55544443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.89  E-value=0.098  Score=45.94  Aligned_cols=91  Identities=13%  Similarity=0.147  Sum_probs=55.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH---HHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC---DEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..+.|+++.|.|. |.||+++|+.|...|++|+..+++........   ..+.+.. ....+..+.+..+.  +....+-
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell-~~aDiVil~lP~t~--~t~~li~  217 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAI-KDADIISLHVPANK--ESYHLFD  217 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHH-hcCCEEEEeCCCcH--HHHHHHh
Confidence            3689999999987 78999999999999999999999865432211   1122221 12356666666552  2333333


Q ss_pred             HHHHHHcCCccEEEECCCC
Q 023555           92 QKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~  110 (280)
                      ++...... .+.++-|++.
T Consensus       218 ~~~l~~mk-~gavlIN~aR  235 (330)
T PRK12480        218 KAMFDHVK-KGAILVNAAR  235 (330)
T ss_pred             HHHHhcCC-CCcEEEEcCC
Confidence            44444443 3444444443

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.86  E-value=0.31  Score=42.18  Aligned_cols=111  Identities=15%  Similarity=0.207  Sum_probs=71.2

Q ss_pred             ecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCcc
Q 023555           25 TGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRID  102 (280)
Q Consensus        25 tG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  102 (280)
                      .| +|.+|.++|..++..+.  .++++|.+++.++....+++........-..+..  . +           .+.+...|
T Consensus         2 IG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~-~-----------~~~~~daD   66 (299)
T TIGR01771         2 IG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS--G-D-----------YSDCKDAD   66 (299)
T ss_pred             CC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec--C-C-----------HHHHCCCC
Confidence            45 49999999999998877  5999999988887777777654321111011111  1 2           12334789


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555          103 ALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus       103 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ++|..||...  ++  .++..+   .++.|    ..+++.+.+.+.+....+.+|++|.
T Consensus        67 ivVitag~~r--k~--g~~R~d---ll~~N----~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        67 LVVITAGAPQ--KP--GETRLE---LVGRN----VRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             EEEECCCCCC--CC--CCCHHH---HHHHH----HHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            9999999742  22  344443   33444    4455666677777666788888875

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.84  E-value=0.14  Score=43.66  Aligned_cols=41  Identities=37%  Similarity=0.409  Sum_probs=34.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKS   58 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~   58 (280)
                      ..+++++|.|+ +++|..+++.+...|++ |+.+++++++++.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            46889999986 89999999988888997 8888887776653

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.84  E-value=0.064  Score=47.78  Aligned_cols=80  Identities=18%  Similarity=0.267  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|.++||+|+ ++||...+..+...|+ +|+.+++++++++.+ +++    +.  ..   ..|..+..+.+.+.+.++..
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~----Ga--~~---~i~~~~~~~~~~~~v~~~~~  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL----GA--TD---CVNPNDYDKPIQEVIVEITD  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----CC--Ce---EEcccccchhHHHHHHHHhC
Confidence            4889999975 8999999998888899 799999988876655 333    11  11   12222111223333333322


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                        +.+|++|.++|.
T Consensus       254 --~g~d~vid~~G~  265 (368)
T TIGR02818       254 --GGVDYSFECIGN  265 (368)
T ss_pred             --CCCCEEEECCCC
Confidence              379999999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.83  E-value=0.027  Score=48.15  Aligned_cols=38  Identities=21%  Similarity=0.255  Sum_probs=35.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +++||+++|+|.+.-+|+.+++.|.++|++|.++.+..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            79999999999999999999999999999998887754

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.82  E-value=0.1  Score=45.48  Aligned_cols=91  Identities=14%  Similarity=0.133  Sum_probs=55.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH---H--HHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS---L--CDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~---~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      ...+.||++.|.|- |.||+++|+.|...|++|+..+++.+....   .  ..++.+... .+.+..+.+..+   ++.+
T Consensus       131 ~~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~-~aDvvv~~lPlt---~~T~  205 (312)
T PRK15469        131 EYHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLS-QTRVLINLLPNT---PETV  205 (312)
T ss_pred             CCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHh-cCCEEEECCCCC---HHHH
Confidence            34689999999986 899999999999999999999876532110   0  011221111 235666666665   3344


Q ss_pred             HHHH-HHHHHcCCccEEEECCCC
Q 023555           89 NSVQ-KAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        89 ~~~~-~~~~~~g~id~li~~ag~  110 (280)
                      .+++ +..+...+ +.++-|.|.
T Consensus       206 ~li~~~~l~~mk~-ga~lIN~aR  227 (312)
T PRK15469        206 GIINQQLLEQLPD-GAYLLNLAR  227 (312)
T ss_pred             HHhHHHHHhcCCC-CcEEEECCC
Confidence            5544 34444443 444444443

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.80  E-value=0.049  Score=54.57  Aligned_cols=78  Identities=23%  Similarity=0.299  Sum_probs=58.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhC-Ce-------------EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAG-CR-------------IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G-~~-------------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      -+.|.|+|.|+ |.+|+.+++.|++.+ +.             |.+++++.+.++++.+.+.       .+..+..|++ 
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-------~~~~v~lDv~-  637 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-------NAEAVQLDVS-  637 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-------CCceEEeecC-
Confidence            34789999997 999999999999763 23             7888998888777665431       3556888888 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCC
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~  110 (280)
                      +.+++.++++       .+|+||++...
T Consensus       638 D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        638 DSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             CHHHHHHhhc-------CCCEEEECCCc
Confidence            5555555544       58999999864

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.79  E-value=0.092  Score=45.72  Aligned_cols=38  Identities=13%  Similarity=0.163  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ..+.||++.|.|- |.||+++|+.+...|.+|+..+|..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence            4799999999997 8999999999999999999998853

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.78  E-value=0.15  Score=45.21  Aligned_cols=41  Identities=27%  Similarity=0.310  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~   59 (280)
                      .|+++||.|+ +++|...+..+...|++ |+.+++++++.+.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4889999975 99999999988888995 88998988776654

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.78  E-value=0.12  Score=46.14  Aligned_cols=41  Identities=29%  Similarity=0.387  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~   59 (280)
                      .+++++|.|+ +++|..++..+...|+ +|+.+++++++++.+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a  232 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA  232 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH
Confidence            4789999985 8999999988888899 599999988876644

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.75  E-value=0.093  Score=42.48  Aligned_cols=38  Identities=24%  Similarity=0.397  Sum_probs=32.1

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecC
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR   52 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~   52 (280)
                      ...+++++|+|.|+ +|+|.++++.|+..|.. +.++|.+
T Consensus        16 Q~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          16 QKRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            44688999999986 66999999999999995 7888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.75  E-value=0.028  Score=47.87  Aligned_cols=44  Identities=25%  Similarity=0.333  Sum_probs=38.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~   63 (280)
                      +|+++|.|+ ||-+++++..|++.|+. |.++.|+.++++++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999996 99999999999999984 999999998888776643

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.74  E-value=0.095  Score=48.52  Aligned_cols=85  Identities=18%  Similarity=0.083  Sum_probs=54.9

Q ss_pred             CCCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCH
Q 023555            6 SDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANG   84 (280)
Q Consensus         6 ~~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (280)
                      ++-+.+... ++++|+++|.|+ |++|.++|+.|.++|++|.++++.+. ......+.+.+.   +  +.+...+-.   
T Consensus         4 ~~~~~~~~~-~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~---g--v~~~~~~~~---   73 (480)
T PRK01438          4 PPGLTSWHS-DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL---G--ATVRLGPGP---   73 (480)
T ss_pred             ccchhhccc-CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc---C--CEEEECCCc---
Confidence            343444333 678999999997 78999999999999999999986643 333334444331   1  222221111   


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           85 AAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        85 ~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                      +           .....|.+|..+|+.
T Consensus        74 ~-----------~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         74 T-----------LPEDTDLVVTSPGWR   89 (480)
T ss_pred             c-----------ccCCCCEEEECCCcC
Confidence            1           013689999999975

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.74  E-value=0.27  Score=44.84  Aligned_cols=117  Identities=20%  Similarity=0.167  Sum_probs=70.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh---CC----eEEEEec--ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA---GC----RIVAAAR--RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~---G~----~v~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      -+|.||||+|-||+++.-.++.-   |.    .++|++.  +.+.++...-+++.....-.+-..+..|   +       
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~---~-------  193 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTD---L-------  193 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEEC---C-------
Confidence            46999999999999999999962   53    2678887  5777777777776643111111111111   1       


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEec
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINISS  161 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vsS  161 (280)
                          .+.+...|++|..+|...  ++  ..+..+   .++.|.    .+++...+.+.+... ..+|+.+.|
T Consensus       194 ----~ea~~daDvvIitag~pr--k~--G~~R~D---LL~~N~----~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         194 ----DVAFKDAHVIVLLDDFLI--KE--GEDLEG---CIRSRV----AICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             ----HHHhCCCCEEEECCCCCC--Cc--CCCHHH---HHHHHH----HHHHHHHHHHHHhCCCCCeEEEEeC
Confidence                123348999999999742  21  334443   444444    455666666665442 245555553

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.73  E-value=0.02  Score=44.58  Aligned_cols=43  Identities=23%  Similarity=0.431  Sum_probs=34.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   58 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~   58 (280)
                      +++||+++|.|.+.-+|+.++..|.++|+.|.++....+.+++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            6999999999999999999999999999999988776544443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.73  E-value=0.18  Score=40.84  Aligned_cols=74  Identities=18%  Similarity=0.302  Sum_probs=48.6

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcC--------CCcceEEEEeccCCCHHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSG--------SSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ....||+|.||.+++++|++.|+.|++..|+ +++++...+.+....-        ....+.++..    ..+.+...+.
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAV----P~~a~~~v~~   78 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAV----PFEAIPDVLA   78 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEec----cHHHHHhHHH
Confidence            4556778999999999999999999888665 4455555555432200        0123444444    3456777777


Q ss_pred             HHHHHcC
Q 023555           93 KAWEAFG   99 (280)
Q Consensus        93 ~~~~~~g   99 (280)
                      ++.+.++
T Consensus        79 ~l~~~~~   85 (211)
T COG2085          79 ELRDALG   85 (211)
T ss_pred             HHHHHhC
Confidence            7777665

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.72  E-value=0.45  Score=41.18  Aligned_cols=115  Identities=17%  Similarity=0.194  Sum_probs=67.0

Q ss_pred             EEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +.|.|+ |.+|..+|..++.+|. +|++++++++.++....++............+.  .+.+   .+        .+..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~--~t~d---~~--------~l~d   66 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVT--GTND---YE--------DIAG   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE--EcCC---HH--------HhCC
Confidence            468888 8899999999998876 999999997755433333332211000001111  1111   11        1237


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      .|++|.++|...  .+  +.+..+   .+.-    .+.+.+.+.+.+.+...++.+|++|.
T Consensus        67 ADiVIit~g~p~--~~--~~~r~e---~~~~----n~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          67 SDVVVITAGIPR--KP--GMSRDD---LLGT----NAKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             CCEEEEecCCCC--Cc--CCCHHH---HHHH----HHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            899999998642  11  223222   2222    34566777777777665677777765

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.71  E-value=0.027  Score=45.78  Aligned_cols=39  Identities=26%  Similarity=0.388  Sum_probs=35.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +.+++||.+||.|| |.+|...++.|.+.|++|.++.++.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            34899999999999 8999999999999999999998764

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.70  E-value=0.16  Score=44.92  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=30.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      ..|++++|+|+ |++|...+..+...|++|++++|+
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            36889999985 999999998888889999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.69  E-value=0.11  Score=46.74  Aligned_cols=37  Identities=38%  Similarity=0.404  Sum_probs=32.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEec
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAAR   51 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r   51 (280)
                      ...|++.+|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus        37 q~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~   74 (392)
T PRK07878         37 QKRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEF   74 (392)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            34678999999988 7999999999999999 5888876

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.68  E-value=0.11  Score=42.84  Aligned_cols=145  Identities=17%  Similarity=0.169  Sum_probs=81.3

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChh-------------------HHHHHHHHHHhhcCCCcc
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVD-------------------RLKSLCDEINKQSGSSVR   72 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~-------------------~~~~~~~~~~~~~~~~~~   72 (280)
                      .+..|++..|+|.|. ||+|..++.+|++.|. ++.++|-+.-                   +.+-..+.+.+.. +.++
T Consensus        24 ~lekl~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~In-P~c~  101 (263)
T COG1179          24 GLEKLKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQIN-PECE  101 (263)
T ss_pred             HHHHHhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhC-CCce
Confidence            345678889999988 8999999999999999 5888876431                   2222223332222 2233


Q ss_pred             eEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Q 023555           73 AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ  152 (280)
Q Consensus        73 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  152 (280)
                      +..+..=++  ++.++.++.      ..+|++|-+--.                      +..=..|+..|    .++  
T Consensus       102 V~~~~~f~t--~en~~~~~~------~~~DyvIDaiD~----------------------v~~Kv~Li~~c----~~~--  145 (263)
T COG1179         102 VTAINDFIT--EENLEDLLS------KGFDYVIDAIDS----------------------VRAKVALIAYC----RRN--  145 (263)
T ss_pred             EeehHhhhC--HhHHHHHhc------CCCCEEEEchhh----------------------hHHHHHHHHHH----HHc--
Confidence            333322222  233333333      156666654321                      11222333333    332  


Q ss_pred             CCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCC
Q 023555          153 EGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH  197 (280)
Q Consensus       153 ~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~  197 (280)
                        .+-++||.++...........-..+|.-...|++-+..++.++
T Consensus       146 --ki~vIss~Gag~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~  188 (263)
T COG1179         146 --KIPVISSMGAGGKLDPTRIQVADISKTIQDPLAAKVRRKLRKR  188 (263)
T ss_pred             --CCCEEeeccccCCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence              2344455444322222334466788999999999999999776

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.67  E-value=0.01  Score=42.71  Aligned_cols=38  Identities=21%  Similarity=0.321  Sum_probs=32.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .+++||.+||.|| |.+|..-++.|.+.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            3799999999999 8999999999999999999999886

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.65  E-value=0.064  Score=46.44  Aligned_cols=42  Identities=31%  Similarity=0.370  Sum_probs=37.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~  183 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV  183 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999988776544

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02928 oxidoreductase family protein

Probab=95.64  E-value=0.12  Score=45.85  Aligned_cols=38  Identities=26%  Similarity=0.364  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ..+.||++.|.|- |.||+++|+.|...|++|+.++|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            3699999999998 8999999999999999999999873

>PLN02740 Alcohol dehydrogenase-like

Probab=95.60  E-value=0.084  Score=47.28  Aligned_cols=81  Identities=14%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|+++||.|+ |++|...+..+...|+ +|+.+++++++++.+. ++    +.  .. ++  |..+..+...+.+.++.
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~----Ga--~~-~i--~~~~~~~~~~~~v~~~~  265 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM----GI--TD-FI--NPKDSDKPVHERIREMT  265 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc----CC--cE-EE--ecccccchHHHHHHHHh
Confidence            34889999985 9999999998888999 5999999887766552 22    21  11 12  22211112333333332


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      .  +.+|++|.++|.
T Consensus       266 ~--~g~dvvid~~G~  278 (381)
T PLN02740        266 G--GGVDYSFECAGN  278 (381)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  269999999884

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.59  E-value=0.1  Score=44.96  Aligned_cols=43  Identities=19%  Similarity=0.268  Sum_probs=37.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -+|.+++|.|+++++|+++++.....|++|+.+++++++.+.+
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999999887765544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02306 hydroxypyruvate reductase

Probab=95.58  E-value=0.15  Score=45.79  Aligned_cols=38  Identities=16%  Similarity=0.153  Sum_probs=33.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHH-HhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~-~~G~~v~l~~r~~   53 (280)
                      ..+.||++.|.|- |.||+++|+.+. ..|++|+..++..
T Consensus       161 ~~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~  199 (386)
T PLN02306        161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ  199 (386)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            3699999999987 899999999986 7899999998864

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.58  E-value=0.17  Score=38.47  Aligned_cols=78  Identities=22%  Similarity=0.374  Sum_probs=50.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcceEEEEecc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRAMAVELDV   80 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~D~   80 (280)
                      +++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++..+ ..++.....++
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p-~v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP-GVNVTAVPEGI   78 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC-CcEEEEEeeec
Confidence            3788887 8999999999999999 588887641                   245555566655443 44555555555


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      . . ...       .+.+.+.|++|.+..
T Consensus        79 ~-~-~~~-------~~~~~~~diVi~~~d   98 (143)
T cd01483          79 S-E-DNL-------DDFLDGVDLVIDAID   98 (143)
T ss_pred             C-h-hhH-------HHHhcCCCEEEECCC
Confidence            4 1 111       222347788887764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK14851 hypothetical protein; Provisional

Probab=95.58  E-value=0.12  Score=49.65  Aligned_cols=84  Identities=12%  Similarity=0.222  Sum_probs=57.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ...|++++|+|.|. ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.++ .+++
T Consensus        38 Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP-~~~I  115 (679)
T PRK14851         38 QERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP-FLEI  115 (679)
T ss_pred             HHHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC-CCeE
Confidence            34788999999995 8999999999999999 578887531                   245555556655443 5566


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNA  108 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~a  108 (280)
                      ..+...++  .+.+..+++       .+|+||.+.
T Consensus       116 ~~~~~~i~--~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        116 TPFPAGIN--ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             EEEecCCC--hHHHHHHHh-------CCCEEEECC
Confidence            66666665  234444443       567776554

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.56  E-value=0.029  Score=48.25  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=37.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   57 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~   57 (280)
                      +++||++.|.|.++-+|+.+|..|.++|+.|.++.+....++
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            799999999999999999999999999999999977654433

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.55  E-value=0.13  Score=44.93  Aligned_cols=37  Identities=19%  Similarity=0.254  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      ..+.||++.|.|- |.||+++|+.+...|++|+..+|.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4799999999998 899999999999999999988875

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.54  E-value=0.11  Score=45.49  Aligned_cols=88  Identities=17%  Similarity=0.207  Sum_probs=56.3

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh--HHHHH------HHHHHhhcCCCcceEEEEeccCCCH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD--RLKSL------CDEINKQSGSSVRAMAVELDVSANG   84 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~--~~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~   84 (280)
                      ...++.||++-|.|- |.||+++|+.+...|++|+..+|++.  ..+..      .+++-+    ...+..+.|.++.  
T Consensus       140 ~~~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~----~sDii~l~~Plt~--  212 (324)
T COG1052         140 LGFDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLA----ESDIISLHCPLTP--  212 (324)
T ss_pred             cccCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHH----hCCEEEEeCCCCh--
Confidence            445899999999986 89999999999988999999998753  11110      112211    2367777777762  


Q ss_pred             HHHHHHHHH-HHHHcCCccEEEECC
Q 023555           85 AAIENSVQK-AWEAFGRIDALVNNA  108 (280)
Q Consensus        85 ~~~~~~~~~-~~~~~g~id~li~~a  108 (280)
                      + -+.+++. ..+..++=-++||.+
T Consensus       213 ~-T~hLin~~~l~~mk~ga~lVNta  236 (324)
T COG1052         213 E-TRHLINAEELAKMKPGAILVNTA  236 (324)
T ss_pred             H-HhhhcCHHHHHhCCCCeEEEECC
Confidence            2 3444433 344444434455554

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.54  E-value=0.1  Score=46.43  Aligned_cols=80  Identities=18%  Similarity=0.268  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|.++||.|+ +++|...++.+...|+ +|+.+++++++++.+ +++    +.  ..   ..|..+..++..+.+.++..
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l----Ga--~~---~i~~~~~~~~~~~~v~~~~~  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF----GA--TD---CVNPKDHDKPIQQVLVEMTD  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc----CC--CE---EEcccccchHHHHHHHHHhC
Confidence            4899999975 8999999999999999 699999998877644 332    11  11   12322111233444444322


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                        +++|+++.++|.
T Consensus       255 --~g~d~vid~~g~  266 (368)
T cd08300         255 --GGVDYTFECIGN  266 (368)
T ss_pred             --CCCcEEEECCCC
Confidence              379999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.50  E-value=0.082  Score=46.51  Aligned_cols=39  Identities=18%  Similarity=0.247  Sum_probs=35.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      ..+.||++.|.|- |.||+++|+.|...|++|+..+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4799999999998 99999999999999999999998754

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.47  E-value=0.14  Score=44.52  Aligned_cols=31  Identities=32%  Similarity=0.449  Sum_probs=26.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   52 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~   52 (280)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3788886 8999999999999999 58888863

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.45  E-value=0.079  Score=48.55  Aligned_cols=77  Identities=21%  Similarity=0.319  Sum_probs=55.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ...+.++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...++.       ..+..+..|.+ +.+.++++      
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-------~~~~~i~gd~~-~~~~L~~~------  293 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-------PNTLVLHGDGT-DQELLEEE------  293 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-------CCCeEEECCCC-CHHHHHhc------
Confidence            45788999999 99999999999999999999999988766654432       13456788888 54333222      


Q ss_pred             HcCCccEEEECC
Q 023555           97 AFGRIDALVNNA  108 (280)
Q Consensus        97 ~~g~id~li~~a  108 (280)
                      .....|.+|...
T Consensus       294 ~~~~a~~vi~~~  305 (453)
T PRK09496        294 GIDEADAFIALT  305 (453)
T ss_pred             CCccCCEEEECC
Confidence            123677777554

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.43  E-value=0.18  Score=41.91  Aligned_cols=30  Identities=30%  Similarity=0.490  Sum_probs=25.8

Q ss_pred             EEEecCCChhHHHHHHHHHHhCC-eEEEEecC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGC-RIVAAARR   52 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~   52 (280)
                      ++|.| .||+|..+++.|+..|. ++.++|.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            67777 58999999999999999 58888874

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.41  E-value=0.11  Score=42.32  Aligned_cols=39  Identities=23%  Similarity=0.382  Sum_probs=34.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      .+++||.+||.|| |.+|..-++.|++.|++|.+++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3799999999998 78999999999999999999987653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=95.39  E-value=0.18  Score=44.06  Aligned_cols=93  Identities=19%  Similarity=0.192  Sum_probs=58.6

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH------HHhhcCCCcceEEEEeccCCCHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE------INKQSGSSVRAMAVELDVSANGA   85 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~------~~~~~~~~~~~~~~~~D~~~~~~   85 (280)
                      .-..++.||++.|.|. |.||+++|++|-..|..+.-..|++...+...+.      +.+.. ....+..+.|-++  .+
T Consensus       155 ~~g~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~-~~sD~ivv~~pLt--~~  230 (336)
T KOG0069|consen  155 PLGYDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELL-ANSDVIVVNCPLT--KE  230 (336)
T ss_pred             cccccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHH-hhCCEEEEecCCC--HH
Confidence            3446899999999998 8999999999999995566666755433332221      11111 1236777777776  23


Q ss_pred             HHHHHHHHHHHHcCCccEEEECC
Q 023555           86 AIENSVQKAWEAFGRIDALVNNA  108 (280)
Q Consensus        86 ~~~~~~~~~~~~~g~id~li~~a  108 (280)
                      ..+-+=+++.++.++=-+|||++
T Consensus       231 T~~liNk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  231 TRHLINKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             HHHHhhHHHHHhcCCCeEEEecc
Confidence            33333344455665555677776

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.38  E-value=0.061  Score=37.80  Aligned_cols=41  Identities=15%  Similarity=0.363  Sum_probs=33.9

Q ss_pred             EEEecCCChhHHHHHHHHHHhC---CeEEEE-ecChhHHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAG---CRIVAA-ARRVDRLKSLCDEI   63 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G---~~v~l~-~r~~~~~~~~~~~~   63 (280)
                      +.|. |+|.+|.++++.|.+.|   .+|.++ .|++++.+++.++.
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            3444 77999999999999999   889855 99999988877654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.38  E-value=0.53  Score=37.53  Aligned_cols=78  Identities=22%  Similarity=0.247  Sum_probs=58.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++||+|+=.|++.|+ .+++-.  -.|+ +|+.++.+++.++.+.+...+.   ..++.++.+|++ +         
T Consensus        41 ~g~l~g~~V~DlG~GTG~-La~ga~--~lGa~~V~~vdiD~~a~ei~r~N~~~l---~g~v~f~~~dv~-~---------  104 (198)
T COG2263          41 RGDLEGKTVLDLGAGTGI-LAIGAA--LLGASRVLAVDIDPEALEIARANAEEL---LGDVEFVVADVS-D---------  104 (198)
T ss_pred             cCCcCCCEEEEcCCCcCH-HHHHHH--hcCCcEEEEEecCHHHHHHHHHHHHhh---CCceEEEEcchh-h---------
Confidence            358999999999988776 344433  3475 6999999999988888777662   347889999987 2         


Q ss_pred             HHHHHcCCccEEEECCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~  111 (280)
                          ..+++|.+|.|+-+.
T Consensus       105 ----~~~~~dtvimNPPFG  119 (198)
T COG2263         105 ----FRGKFDTVIMNPPFG  119 (198)
T ss_pred             ----cCCccceEEECCCCc
Confidence                125789999998653

>PRK07574 formate dehydrogenase; Provisional

Probab=95.37  E-value=0.16  Score=45.58  Aligned_cols=38  Identities=18%  Similarity=0.234  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .++.||++.|.|- |.||+++|+.|...|++|+..+|+.
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            4799999999998 7799999999999999999999875

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.37  E-value=0.12  Score=45.02  Aligned_cols=43  Identities=23%  Similarity=0.363  Sum_probs=37.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .++.+++|.|+++.+|++++......|++|+.+++++++.+.+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            3588999999999999999999999999999999887765544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.36  E-value=0.32  Score=43.05  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=34.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~   59 (280)
                      .++++||+| ++++|+++++.+...|+ +|+.+++++++.+.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            688999997 59999999998888999 899998887765543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.36  E-value=1  Score=39.08  Aligned_cols=118  Identities=17%  Similarity=0.163  Sum_probs=65.9

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++.|.|+ |-+|..+|..++.+|. +|++++.+++..+.....+.+..... .. ......+.+.   +.        .
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~-~~-~~~i~~t~d~---~~--------~   67 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVG-GF-DTKVTGTNNY---AD--------T   67 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhcc-CC-CcEEEecCCH---HH--------h
Confidence            46788887 8899999999999886 89999997654332222222211100 00 0011111121   11        2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                      ...|++|-.+|...  ++  +.+..+   .+..|+.-.    +.+.+.+.+....+.+|++|.-
T Consensus        68 ~~aDiVIitag~p~--~~--~~sR~~---l~~~N~~iv----~~i~~~I~~~~p~~~iIv~tNP  120 (305)
T TIGR01763        68 ANSDIVVITAGLPR--KP--GMSRED---LLSMNAGIV----REVTGRIMEHSPNPIIVVVSNP  120 (305)
T ss_pred             CCCCEEEEcCCCCC--Cc--CCCHHH---HHHHHHHHH----HHHHHHHHHHCCCeEEEEecCc
Confidence            37899999999742  22  233332   444455444    4444444444446788888763

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PLN03139 formate dehydrogenase; Provisional

Probab=95.36  E-value=0.12  Score=46.35  Aligned_cols=38  Identities=26%  Similarity=0.386  Sum_probs=34.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .++.||++.|.|- |.||+.+|+.|...|++|+..+|+.
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4799999999995 8899999999999999999998864

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.34  E-value=0.056  Score=46.13  Aligned_cols=38  Identities=21%  Similarity=0.367  Sum_probs=34.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +++||+++|.|.+.-+|+.++..|.++|+.|.++....
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t  191 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT  191 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence            78999999999999999999999999999998775443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.30  E-value=0.11  Score=45.05  Aligned_cols=42  Identities=17%  Similarity=0.283  Sum_probs=37.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .|.+++|.|+++++|.++++.....|++++.+.++.++.+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            588999999999999999999999999999998888765554

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.27  E-value=0.25  Score=42.11  Aligned_cols=108  Identities=18%  Similarity=0.276  Sum_probs=70.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -+|+|++|.||+|..|+-+-+--.-.|+.|+-.+-+.++..-+..++    +...     ..|-. .+.++.+++.+..-
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~----G~d~-----afNYK-~e~~~~~aL~r~~P  221 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKF----GFDD-----AFNYK-EESDLSAALKRCFP  221 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhcc----CCcc-----ceecc-CccCHHHHHHHhCC
Confidence            45899999999999998666655556999998888887766554443    2111     11222 22245555554322


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                        ..+|+.+-|.|..                           ++.+.+..|+.   .|||+..+-++.+.
T Consensus       222 --~GIDiYfeNVGG~---------------------------~lDavl~nM~~---~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  222 --EGIDIYFENVGGK---------------------------MLDAVLLNMNL---HGRIAVCGMISQYN  259 (343)
T ss_pred             --CcceEEEeccCcH---------------------------HHHHHHHhhhh---ccceEeeeeehhcc
Confidence              2799999999852                           22355555654   58999998777654

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.25  E-value=0.063  Score=41.73  Aligned_cols=43  Identities=23%  Similarity=0.264  Sum_probs=33.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.||+++|.|= |.+|+.+|+.|...|++|+++..++.++-++
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA   62 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQA   62 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHh
Confidence            588999999986 8999999999999999999999998655443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.25  E-value=0.3  Score=42.00  Aligned_cols=43  Identities=28%  Similarity=0.256  Sum_probs=36.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~   62 (280)
                      -++|.|.|+ |.+|.++|..|+.+|++|++.+++++.++...+.
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT   46 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence            356788876 8999999999999999999999998887765443

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.24  E-value=0.12  Score=45.14  Aligned_cols=88  Identities=15%  Similarity=0.233  Sum_probs=55.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHH-----HHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKS-----LCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      .+.|||+-|.|. |.||+++|+.+...|++|+..++ .....+.     ....+++.. ....+..+.+.++++   -+.
T Consensus       139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL-~~sDiv~lh~PlT~e---T~g  213 (324)
T COG0111         139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELL-AEADILTLHLPLTPE---TRG  213 (324)
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHH-hhCCEEEEcCCCCcc---hhc
Confidence            688999999997 89999999999999999999999 3322111     001111111 123677777777732   333


Q ss_pred             HHHH-HHHHcCCccEEEECC
Q 023555           90 SVQK-AWEAFGRIDALVNNA  108 (280)
Q Consensus        90 ~~~~-~~~~~g~id~li~~a  108 (280)
                      +++. ......+--++||++
T Consensus       214 ~i~~~~~a~MK~gailIN~a  233 (324)
T COG0111         214 LINAEELAKMKPGAILINAA  233 (324)
T ss_pred             ccCHHHHhhCCCCeEEEECC
Confidence            4333 233443334677776

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.24  E-value=0.037  Score=43.09  Aligned_cols=39  Identities=21%  Similarity=0.292  Sum_probs=34.1

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR   51 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r   51 (280)
                      |=+.+++||.++|.|| |.+|...++.|.+.|++|.+++.
T Consensus         6 P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          6 PLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             ceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            3345899999999998 78999999999999999988854

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.18  E-value=0.15  Score=45.34  Aligned_cols=81  Identities=12%  Similarity=0.230  Sum_probs=52.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+++|.|+ +++|...++.+...|+ +|+.+++++++.+.+ +++    +.  .. .  .|..+..+...+.+.++.
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~----Ga--~~-~--i~~~~~~~~~~~~v~~~~  254 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF----GV--TE-F--VNPKDHDKPVQEVIAEMT  254 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----CC--ce-E--EcccccchhHHHHHHHHh
Confidence            35889999985 8999999998888999 799999988776654 332    11  11 1  122211123334444433


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      .  +.+|+++.+.|.
T Consensus       255 ~--~~~d~vid~~G~  267 (369)
T cd08301         255 G--GGVDYSFECTGN  267 (369)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  369999998863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.13  E-value=0.039  Score=42.30  Aligned_cols=40  Identities=33%  Similarity=0.527  Sum_probs=32.4

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      |+.+|+++-+|+++|.+|.++|.+|+..  +.+.-+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999988  444445544444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.08  E-value=0.12  Score=44.26  Aligned_cols=42  Identities=29%  Similarity=0.398  Sum_probs=37.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      ++.+++|+|+++++|++++..+...|++|+.++++.+..+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999987665543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.05  E-value=0.065  Score=48.35  Aligned_cols=43  Identities=19%  Similarity=0.268  Sum_probs=37.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.|++++|.|+ |.||+.+++.+...|++|+++++++.+++.+
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            478999999998 5899999999999999999999988776544

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.04  E-value=0.35  Score=42.56  Aligned_cols=41  Identities=17%  Similarity=0.244  Sum_probs=34.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~   59 (280)
                      .+++++|+| ++++|..+++.+...|++ |+.+++++++.+.+
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  201 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA  201 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            588999997 599999999988899997 67888888776643

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.02  E-value=0.28  Score=42.95  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=33.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHH-HhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~-~~G~~v~l~~r~~   53 (280)
                      .+.||++.|.|- |.||+++|+.+. ..|.+|+..++..
T Consensus       142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~  179 (323)
T PRK15409        142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRH  179 (323)
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            799999999998 899999999997 7899999888763

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.02  E-value=0.15  Score=44.02  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=37.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -.+.+++|.|+++++|+++++.+...|++|+.+.+++++.+.+
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            3578999999999999999999999999999999888765544

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK06436 glycerate dehydrogenase; Provisional

Probab=95.02  E-value=0.25  Score=42.82  Aligned_cols=38  Identities=32%  Similarity=0.336  Sum_probs=34.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ..+.||++.|.|- |.||+++|+.+...|++|+..+|+.
T Consensus       118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~  155 (303)
T PRK06436        118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSY  155 (303)
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4799999999987 8999999998888899999999863

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.00  E-value=0.46  Score=40.78  Aligned_cols=42  Identities=24%  Similarity=0.269  Sum_probs=35.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~   62 (280)
                      ++|.|.|+ |-+|.++|..|++.|++|++++++++.++...+.
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            46778876 8999999999999999999999998877666544

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.00  E-value=0.39  Score=42.08  Aligned_cols=92  Identities=14%  Similarity=0.166  Sum_probs=54.8

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH-------HhhcCCCcceEEEEeccCCCHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI-------NKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      ...+++|++.|.|. |.+|.++|+.|.+.|.+|++..|+..+..+...+.       .+.. ....++++.+  .  ...
T Consensus        12 ~~~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa-~~ADVVvLaV--P--d~~   85 (330)
T PRK05479         12 LSLIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAA-KWADVIMILL--P--DEV   85 (330)
T ss_pred             hhhhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHH-hcCCEEEEcC--C--HHH
Confidence            34688999999987 58999999999999999988877644333222211       1100 0112333333  2  223


Q ss_pred             HHHHH-HHHHHHcCCccEEEECCCCC
Q 023555           87 IENSV-QKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        87 ~~~~~-~~~~~~~g~id~li~~ag~~  111 (280)
                      ...++ +++.....+=.+|++++|+.
T Consensus        86 ~~~V~~~~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         86 QAEVYEEEIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHHHHHHHHhcCCCCCEEEECCCCC
Confidence            35555 55555443334667788764

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.98  E-value=0.059  Score=48.78  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=36.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   57 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~   57 (280)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            478999999997 79999999999999999999999876643

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=94.98  E-value=0.11  Score=40.85  Aligned_cols=42  Identities=29%  Similarity=0.397  Sum_probs=33.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      +...+++|+|+ |-.|...++.|...|++|+..+...+.+++.
T Consensus        18 ~~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~   59 (168)
T PF01262_consen   18 VPPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQL   59 (168)
T ss_dssp             E-T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred             CCCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence            45678889985 8999999999999999999999988766653

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK14852 hypothetical protein; Provisional

Probab=94.97  E-value=0.18  Score=49.96  Aligned_cols=84  Identities=18%  Similarity=0.246  Sum_probs=56.9

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ...|++.+|+|.|. ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+ +.+++
T Consensus       327 Q~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN-P~v~I  404 (989)
T PRK14852        327 QRRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN-PFLDI  404 (989)
T ss_pred             HHHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC-CCCeE
Confidence            45789999999995 8999999999999999 578887531                   35555566665443 35566


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNA  108 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~a  108 (280)
                      ..+...++  .+.++++++       .+|++|.+.
T Consensus       405 ~~~~~~I~--~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        405 RSFPEGVA--AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             EEEecCCC--HHHHHHHhh-------CCCEEEECC
Confidence            66665554  234444433       567666544

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.93  E-value=0.061  Score=45.94  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=34.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      +++||+++|.|.+.-+|+.++..|.++|++|.++.+...
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~  193 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR  193 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC
Confidence            789999999999999999999999999999988765433

>PRK07877 hypothetical protein; Provisional

Probab=94.90  E-value=0.2  Score=48.52  Aligned_cols=83  Identities=14%  Similarity=0.180  Sum_probs=58.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecCh------------------hHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRV------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ...|++++|+|.|. | +|..++..|+..|.  ++.++|.+.                  .|.+.+++.+.+.+ +.+++
T Consensus       102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in-p~i~v  178 (722)
T PRK07877        102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD-PYLPV  178 (722)
T ss_pred             HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC-CCCEE
Confidence            34788999999999 4 99999999999994  788988632                  35555666665544 35677


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNA  108 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~a  108 (280)
                      ..+...++  .+.++++++       ++|+||.+.
T Consensus       179 ~~~~~~i~--~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        179 EVFTDGLT--EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             EEEeccCC--HHHHHHHhc-------CCCEEEECC
Confidence            77776665  245555543       567777665

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.90  E-value=0.19  Score=43.66  Aligned_cols=42  Identities=14%  Similarity=0.259  Sum_probs=37.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.+++|.|+++++|+++++.+...|++++++.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999988888887766554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	280
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-31
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-30
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-29
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		4e-29
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-29
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		9e-29
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-28
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-28
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		3e-26
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		6e-26
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-25
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		5e-25
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		6e-25
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		9e-25
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-24
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		3e-24
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-24
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-24
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-24
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-24
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-24
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		8e-24
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-24
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-23
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-23
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-23
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		2e-23
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-23
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-23
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-23
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-23
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		3e-23
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-23
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-23
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-22
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-22
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-22
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-22
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-22
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		6e-22
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		8e-22
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		9e-22
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-21
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-21
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-21
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-21
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-21
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		5e-21
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-20
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-20
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-20
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-20
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-20
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		3e-20
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		4e-20
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-20
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-20
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		8e-20
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		8e-20
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		8e-20
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-20
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-19
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-19
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-19
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-19
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-19
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-19
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		2e-19
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		3e-19
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		3e-19
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		3e-19
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		3e-19
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		3e-19
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-19
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-19
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-19
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-19
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		5e-19
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-19
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		6e-19
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		7e-19
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-19
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		8e-19
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		8e-19
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		8e-19
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		9e-19
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-18
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		1e-18
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-18
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-18
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-18
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-18
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-18
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-18
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-18
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-18
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-18
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-18
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		5e-18
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		5e-18
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-15
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		6e-18
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		6e-18
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		7e-18
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		7e-18
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		7e-18
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		7e-18
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		8e-18
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-17
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		1e-17
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-17
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-17
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-17
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-17
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		3e-17
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		3e-17
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		3e-17
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		3e-17
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-17
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-17
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-17
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		4e-17
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		4e-17
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-17
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-17
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		5e-17
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-16
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-16
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-16
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-16
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-16
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-16
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		6e-16
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		7e-16
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		8e-16
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		8e-16
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		8e-16
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		8e-16
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		8e-16
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		9e-16
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		9e-16
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		9e-16
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		1e-15
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-15
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		1e-15
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-15
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-15
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-15
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-15
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		2e-15
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		2e-15
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-15
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		2e-15
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-15
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-15
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-15
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-15
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-15
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-15
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		3e-15
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		3e-15
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		3e-15
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-15
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		5e-15
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		5e-15
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		5e-15
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		6e-15
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		6e-15
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		7e-15
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		7e-15
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		8e-15
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		1e-14
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-14
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-14
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-14
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-14
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-14
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-14
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		2e-14
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		3e-14
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-14
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-14
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-14
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		4e-14
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-14
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		5e-14
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		6e-14
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		7e-14
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		8e-14
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-13
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-13
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-13
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		2e-13
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-13
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-13
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		4e-13
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		5e-13
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		5e-13
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		5e-13
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		6e-13
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		1e-12
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-12
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-12
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		3e-12
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		3e-12
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-12
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		3e-12
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		4e-12
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		4e-12
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		5e-12
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		7e-12
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		8e-12
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		2e-11
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		2e-11
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		2e-11
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		4e-11
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		1e-10
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-10
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-10
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-10
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		2e-10
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-10
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		4e-10
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		4e-10
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		4e-10
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		4e-10
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		4e-10
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		4e-10
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		4e-10
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		5e-10
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		5e-10
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-10
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-10
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		5e-10
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		6e-10
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		8e-10
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		1e-09
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-09
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		3e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		6e-09
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		6e-09
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		6e-09
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		7e-09
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		7e-09
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		8e-09
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		9e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-08
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		1e-08
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		1e-08
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		1e-08
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		3e-08
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		1e-07
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		1e-07
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-07
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		2e-07
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		3e-07
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		3e-07
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		4e-07
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		4e-07
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		4e-07
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-07
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		9e-07
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		9e-07
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		1e-06
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		1e-06
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-06
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		2e-06
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		3e-06
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		4e-06
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		4e-06
1sny_A	267	Carbonyl Reductase Sniffer Of D. Melanogaster Lengt		7e-06
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		1e-05
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		1e-05
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		2e-05
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		2e-05
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		1e-04
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		3e-05
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		3e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		3e-05
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-05
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		5e-05
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		7e-05
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		1e-04
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		1e-04
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		2e-04
1z6z_A	282	Crystal Structure Of Human Sepiapterin Reductase In		2e-04
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		4e-04
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		4e-04
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		6e-04
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		6e-04

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 139/261 (53%), Gaps = 22/261 (8%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTGAS G+GR   +DLAK G  +V   A    +   + DEI K+ GS   A+A
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI-KKLGSD--AIA 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNL 133
           V  DV AN   + N V++  + FG++D LVNNAGV+   K  L   + EEEW+ ++ TNL
Sbjct: 59  VRADV-ANAEDVTNMVKQTVDVFGQVDILVNNAGVT---KDNLLMRMKEEEWDTVINTNL 114
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G +L +K V  R     + G ++NI+S+   +    PG   Y ++KAG+  +TK  + E
Sbjct: 115 KGVFLCTKAVS-RFMMRQRHGRIVNIASVVGVTGN--PGQANYVAAKAGVIGLTKTSAKE 171
Query: 194 LGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           L    I VN+I PG   +++T+ L   +K + L     +  P   FG     + + V + 
Sbjct: 172 LASRNITVNAIAPGFIATDMTDVLDENIKAEML-----KLIPAAQFGEAQD-IANAVTFF 225
Query: 251 VHDSSEYVSGNIFIVDSGATL 271
             D S+Y++G    VD G  +
Sbjct: 226 ASDQSKYITGQTLNVDGGMVM 246

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 139/259 (53%), Gaps = 16/259 (6%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           QL  K  +VTG+S GLG+     L   G  IV              E  K +G  +  + 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG--INVVV 59
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            + DV  N   +EN V+ A +AFGRID LVNNAG++      L ++E++W+ ++ TNL  
Sbjct: 60  AKGDVK-NPEDVENMVKTAMDAFGRIDILVNNAGITRDTLM-LKMSEKDWDDVLNTNLKS 117
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++L +K V  ++    + G +INI+SIA        G   YA+SKAGL   TK ++ E  
Sbjct: 118 AYLCTKAVS-KIMLKQKSGKIINITSIAGIIGN--AGQANYAASKAGLIGFTKSIAKEFA 174
Query: 196 VHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
              I  N++ PG+ K+++T+ L   +K+ +LNN+     PL+ FGT +  + ++V +L  
Sbjct: 175 AKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNI-----PLKRFGTPEE-VANVVGFLAS 228
Query: 253 DSSEYVSGNIFIVDSGATL 271
           D S Y++G +  +D G  +
Sbjct: 229 DDSNYITGQVINIDGGLVM 247

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 143/268 (53%), Gaps = 13/268 (4%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVR 72
           +  L+ KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K  G    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---E 58
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV+ DV+     I N VQ A + FG++D ++NNAG+   V S  +++  +WN ++ TN
Sbjct: 59  AIAVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTN 116
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MTK L+L
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTKTLAL 174
Query: 193 ELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           E     IRVN+I PG   + I  E     +   +V S   P+   G  +  + ++  +L 
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI-PMGYIGEPE-EIAAVAAWLA 232
Query: 252 HDSSEYVSGNIFIVDSGATLPGLPIFSS 279
              + YV+G     D G TL   P F +
Sbjct: 233 SSEASYVTGITLFADGGMTL--YPSFQA 258

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 143/268 (53%), Gaps = 13/268 (4%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVR 72
           +  L+ KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K  G    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---E 58
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV+ DV+     I N VQ A + FG++D ++NNAG+   V S  +++  +WN ++ TN
Sbjct: 59  AIAVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTN 116
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MT+ L+L
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLAL 174
Query: 193 ELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           E     IRVN+I PG   + I  E     +   +V S   P+   G  +  + ++  +L 
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI-PMGYIGEPE-EIAAVAAWLA 232
Query: 252 HDSSEYVSGNIFIVDSGATLPGLPIFSS 279
              + YV+G     D G TL   P F +
Sbjct: 233 SSEASYVTGITLFADGGMTL--YPSFQA 258

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 139/259 (53%), Gaps = 15/259 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  ++TGAS+G+G++  L  A+AG ++  AAR  D L+ + DEI   +G   +A+ +
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI---AGVGGKALPI 86
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+     +   + +     G ID  V NAG+  +V++ LD+  EE+  I  TN+TG 
Sbjct: 87  RCDVT-QPDQVRGMLDQMTGELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGV 144
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA-YASSKAGLNAMTKCLSLELG 195
           +L ++     M D    G++I  +S++      +P  V+ Y +SKA +  +TK +++EL 
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHII-NIPQQVSHYCTSKAAVVHLTKAMAVELA 203
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD--WLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
            H+IRVNS+ PG  ++E+ E L      W   +     PL   G  +  LT L  YL   
Sbjct: 204 PHQIRVNSVSPGYIRTELVEPLADYHALWEPKI-----PLGRMGRPE-ELTGLYLYLASA 257
Query: 254 SSEYVSGNIFIVDSGATLP 272
           +S Y++G+  ++D G T P
Sbjct: 258 ASSYMTGSDIVIDGGYTCP 276

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  123 bits (309), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 140/259 (54%), Gaps = 11/259 (4%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVR 72
           +  L+ KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K  G    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---E 58
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV+ DV+     I N VQ A + FG++D ++NNAG++  V S  +++  +WN ++ TN
Sbjct: 59  AIAVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLANPVSSH-EMSLSDWNKVIDTN 116
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MT+ L+L
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLAL 174
Query: 193 ELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           E     IRVN+I PG   + I  E     +   +V S   P+   G  +  + ++  +L 
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI-PMGYIGEPE-EIAAVAAWLA 232
Query: 252 HDSSEYVSGNIFIVDSGAT 270
              + YV+G     D G T
Sbjct: 233 SSEASYVTGITLFADGGMT 251

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 139/259 (53%), Gaps = 11/259 (4%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVR 72
           +  L+ KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K  G    
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---E 58
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+AV+ DV+     I N VQ A + FG++D ++NNAG+   V S  +++  +WN ++ TN
Sbjct: 59  AIAVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTN 116
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LTG++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MT+ L+L
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMKLMTETLAL 174
Query: 193 ELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           E     IRVN+I PG   + I  E     +   +V S   P+   G  +  + ++  +L 
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI-PMGYIGEPE-EIAAVAAWLA 232
Query: 252 HDSSEYVSGNIFIVDSGAT 270
              + YV+G     D G T
Sbjct: 233 SSEASYVTGITLFADGGMT 251

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 138/257 (53%), Gaps = 13/257 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V +VTG S GLG      LA+AGC +V A+R ++       ++ ++ G  V  MA 
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAF 76
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS---GAVKSPLDLTEEEWNHIMKTNL 133
             DVS N   ++  ++   E FG++D +VN AG++    A + PLD    E+  +++ NL
Sbjct: 77  RCDVS-NYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD----EFRQVIEVNL 131
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G++ V +     +R+++   S+INI S+       +P   AYA+SK G+ ++TK L+ E
Sbjct: 132 FGTYYVCREAFSLLRESDNP-SIINIGSLT-VEEVTMPNISAYAASKGGVASLTKALAKE 189
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
            G + IRVN I PG +++++TE +       +   +  PL   G  +  L  +  +L  +
Sbjct: 190 WGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPED-LKGVAVFLASE 248
Query: 254 SSEYVSGNIFIVDSGAT 270
            ++YV+G I  VD G T
Sbjct: 249 EAKYVTGQIIFVDGGWT 265

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 137/258 (53%), Gaps = 18/258 (6%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +C  +NKV +VTGA  G+GRE    LAK+   ++  +R      S+ DEI K  G     
Sbjct: 40  YCG-ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYESSG 97
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
            A   DVS     I   + K       +D LVNNAG++      L +  +EW  +++TNL
Sbjct: 98  YAG--DVSKK-EEISEVINKILTEHKNVDILVNNAGITRD-NLFLRMKNDEWEDVLRTNL 153
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
              + +++ +  RM + N+ G +INISSI   + G + G   Y+SSKAG+   TK L+ E
Sbjct: 154 NSLFYITQPISKRMIN-NRYGRIINISSIVGLT-GNV-GQANYSSSKAGVIGFTKSLAKE 210
Query: 194 LGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           L    I VN+I PG   S++T+ +   +KK+ ++N+     P    GT +  + +L  +L
Sbjct: 211 LASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI-----PAGRMGTPEE-VANLACFL 264
Query: 251 VHDSSEYVSGNIFIVDSG 268
             D S Y++G +F++D G
Sbjct: 265 SSDKSGYINGRVFVIDGG 282

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 142/258 (55%), Gaps = 18/258 (6%)
Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
            +L  KV +VTG++ G+GR     LA AG  ++      +R K++ +EI  + G  V+A 
Sbjct: 3   IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG--VKAH 60
Query: 75  AVELDVSANGAAIENSVQKAWEAFGR----IDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            VE+++ +     E S+ KA+E        ID LVNNAG++   K  L ++  +W  ++K
Sbjct: 61  GVEMNLLS-----EESINKAFEEIYNLVDGIDILVNNAGITRD-KLFLRMSLLDWEEVLK 114
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            NLTG++LV++   +R     + G ++NISS+   + G + G V Y+++KAGL   TK L
Sbjct: 115 VNLTGTFLVTQN-SLRKMIKQRWGRIVNISSVVGFT-GNV-GQVNYSTTKAGLIGFTKSL 171
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           + EL    + VN++ PG  ++++T  L   + +        PL  FG+ +  + ++V +L
Sbjct: 172 AKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEE-VANVVLFL 228
Query: 251 VHDSSEYVSGNIFIVDSG 268
             + + Y++G +  V+ G
Sbjct: 229 CSELASYITGEVIHVNGG 246

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 137/253 (54%), Gaps = 13/253 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD +V +VTGAS G+GR   L+LA+ G  ++  A      + +     KQ+G   R   +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAF-KQAGLEGRGAVL 84
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            ++   +  A++  V+   + FG ++ LVNNAG++   +  + + ++EW+ ++ TNL   
Sbjct: 85  NVN---DATAVDALVESTLKEFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAV 140
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S+ V   M  A + G ++NI+S+  ++    PG V YA++KAG+  MT+ L+ E+G 
Sbjct: 141 FRLSRAVLRPMMKA-RGGRIVNITSVVGSAGN--PGQVNYAAAKAGVAGMTRALAREIGS 197
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY-PLRDFGTTDPALTSLVRYLVHDSS 255
             I VN + PG   +++T+GL ++      A +T  PL   G+ +  +   V +L    +
Sbjct: 198 RGITVNCVAPGFIDTDMTKGLPQE---QQTALKTQIPLGRLGSPED-IAHAVAFLASPQA 253
Query: 256 EYVSGNIFIVDSG 268
            Y++G    V+ G
Sbjct: 254 GYITGTTLHVNGG 266

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 137/267 (51%), Gaps = 31/267 (11%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN---KQSGSSVR 72
           +L +K V++TGA+ G+GR      AK G R+VA           CD      +++  +V 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVA-----------CDIEEGPLREAAEAVG 50
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSG---AVKSPLDLTEEEWNHIM 129
           A  V  DV A+ A++E    +A    GR+D +V+ AG++      K PL    E+W  ++
Sbjct: 51  AHPVVXDV-ADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPL----EDWELVL 105
Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           + NLTGS+LV+K      R+ N    V+  S +   + GQ      YA+S AG+  +T+ 
Sbjct: 106 RVNLTGSFLVAKAASEAXREKNPGSIVLTASRVYLGNLGQ----ANYAASXAGVVGLTRT 161
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVR 248
           L+LELG   IRVN++ PG  ++  T  + +K     +A+   PL   G   + A  +L  
Sbjct: 162 LALELGRWGIRVNTLAPGFIETRXTAKVPEKVREKAIAA--TPLGRAGKPLEVAYAAL-- 217
Query: 249 YLVHDSSEYVSGNIFIVDSGATLPGLP 275
           +L+ D S +++G +  VD G T+   P
Sbjct: 218 FLLSDESSFITGQVLFVDGGRTIGAAP 244

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 23/266 (8%)
Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
            +L+ K+ +VTGASSG+GR   L  A+ G ++V  AR  + L  L DEI    G +    
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
               D + + A +E +V++    FG +D   NNAG  GA+     L+ E W   + TNLT
Sbjct: 64  GDVGDEALHEALVELAVRR----FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLT 119
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            ++L +KY    +  A   GS+   SS    + G   G   YA+SKAGL  + + L++EL
Sbjct: 120 SAFLAAKYQVPAIA-ALGGGSLTFTSSFVGHTAG-FAGVAPYAASKAGLIGLVQALAVEL 177
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR------ 248
           G   IRVN++ PG        G        N+       R F     AL  + R      
Sbjct: 178 GARGIRVNALLPG--------GTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAE 229
Query: 249 ---YLVHDSSEYVSGNIFIVDSGATL 271
              YL  D + +V+G   + D GA++
Sbjct: 230 AALYLASDGASFVTGAALLADGGASV 255

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 138/260 (53%), Gaps = 13/260 (5%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           + V ++TGA SG+GR   L LA  G  + A  R    ++ + DEI    G+  +A+A+E 
Sbjct: 28  SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI---VGAGGQAIALEA 84
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSW 137
           DVS +     N+V+     FG +D +V NAG++G V +P+D L   EW+  +  NL G++
Sbjct: 85  DVS-DELQXRNAVRDLVLKFGHLDIVVANAGING-VWAPIDDLKPFEWDETIAVNLRGTF 142
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L + ++ +        G+++ +SSI  T     PG  AY ++KA   A+ + L+LELG H
Sbjct: 143 L-TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKH 201
Query: 198 KIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTD--PA----LTSLVRYLV 251
            IRVN++CPG  ++ I++    +          +P      TD  P     +  L+R+LV
Sbjct: 202 HIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV 261
Query: 252 HDSSEYVSGNIFIVDSGATL 271
            + + +V+G+   +D G  L
Sbjct: 262 SERARHVTGSPVWIDGGQGL 281

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 131/258 (50%), Gaps = 14/258 (5%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           + +NKV +VTG+  G+G+ +   LA+ G  +V A    +  +++  +I    G+   A++
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT---AIS 62
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLT--EEEWNHIMKTNL 133
           V +DVS   +A +    +    FG ID LVNNA + G +K    LT   E +   M  NL
Sbjct: 63  VAVDVSDPESA-KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G+   ++ V  +M      G+++N SS AA           Y  +K G+N +T+ LS E
Sbjct: 122 DGALWCTRAVYKKMTKRGG-GAIVNQSSTAAWLYSNY-----YGLAKVGINGLTQQLSRE 175
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           LG   IR+N+I PG   +E       K+ ++++  +  PL   GT D  L  +  +L+ D
Sbjct: 176 LGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIV-KGLPLSRMGTPDD-LVGMCLFLLSD 233
Query: 254 SSEYVSGNIFIVDSGATL 271
            + +++G IF VD G  +
Sbjct: 234 EASWITGQIFNVDGGQII 251

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 135/259 (52%), Gaps = 16/259 (6%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           +  +  L+ KV +VTGAS G+G+     LA+ G +++  A      +++ D +    G +
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDN 59
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            + MA  L+V+ N  +IE  ++   + FG +D LVNNAG++      + + EEEW+ IM+
Sbjct: 60  GKGMA--LNVT-NPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIME 115
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TNLT  + +SK V   M    Q G +IN+ S+  T      G   YA++KAG+   TK +
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGN--AGQANYAAAKAGVIGFTKSM 172
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRY 249
           + E+    + VN++ PG  ++++T+ L  +     +A    P    G  DP  + S V +
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLG--DPREIASAVAF 228
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L    + Y++G    V+ G
Sbjct: 229 LASPEAAYITGETLHVNGG 247

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 7/257 (2%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L +KVV++TG S+GLGR   +   +   ++V      +  +   D   +   +  +A
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVI--NYYNNEEEALDAKKEVEEAGGQA 67
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
           + V+ DV+     + N VQ A + FG +D ++NNAGV   V S  +L+ + WN ++ TNL
Sbjct: 68  IIVQGDVTKEEDVV-NLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTNL 125
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           TG++L S+       + + +G+VIN+SS+        P  V YA+SK G+  MT+ L+LE
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMI--PWPLFVHYAASKGGMKLMTETLALE 183
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                IRVN+I PG   + I                  P+   G  +  + ++  +L   
Sbjct: 184 YAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPE-EVAAVAAFLASS 242
Query: 254 SSEYVSGNIFIVDSGAT 270
            + YV+G     D G T
Sbjct: 243 QASYVTGITLFADGGMT 259

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 7/257 (2%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L +KVV++TG S+GLGR   +   +   ++V      +  +   D   +   +  +A
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVI--NYYNNEEEALDAKKEVEEAGGQA 67
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
           + V+ DV+     + N VQ A + FG +D ++NNAGV   V S  +L+ + WN ++ TNL
Sbjct: 68  IIVQGDVTKEEDVV-NLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTNL 125
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           TG++L S+       + + +G+VIN+SS+        P  V YA+SK G+  MT+ L+LE
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMI--PWPLFVHYAASKGGMKLMTETLALE 183
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                IRVN+I PG   + I                  P+   G  +  + ++  +L   
Sbjct: 184 YAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPE-EVAAVAAFLASS 242
Query: 254 SSEYVSGNIFIVDSGAT 270
            + YV+G     D G T
Sbjct: 243 QASYVTGITLFADGGMT 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 7/257 (2%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L +KVV++TG S+GLGR   +   +   ++V      +  +   D   +   +  +A
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVI--NYYNNEEEALDAKKEVEEAGGQA 67
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
           + V+ DV+     + N VQ A + FG +D ++NNAGV   V S  +L+ + WN ++ TNL
Sbjct: 68  IIVQGDVTKEEDVV-NLVQTAIKEFGTLDVMINNAGVENPVPS-HELSLDNWNKVIDTNL 125
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           TG++L S+       + + +G+VIN+SS+        P  V YA+SK G+  MT+ L+LE
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMI--PWPLFVHYAASKGGMKLMTETLALE 183
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                IRVN+I PG   + I                  P+   G  +  + ++  +L   
Sbjct: 184 YAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPE-EVAAVAAFLASS 242
Query: 254 SSEYVSGNIFIVDSGAT 270
            + YV+G     D G T
Sbjct: 243 QASYVTGITLFADGGMT 259

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 14/262 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L     +VTG S G+G     +LA  G R+   +R    L   C EI ++ G +V     
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE-CLEIWREKGLNVEGSVC 77
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L        +  +V   ++  G+++ LVNNAGV    K   D TE+++N IM TN   +
Sbjct: 78  DLLSRTERDKLMQTVAHVFD--GKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAA 134
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S+ +   +  A+Q G+VI +SSIA  S   LP    Y++SK  +N MTK L+ E   
Sbjct: 135 YHLSQ-IAYPLLKASQNGNVIFLSSIAGFS--ALPSVSLYSASKGAINQMTKSLACEWAK 191
Query: 197 HKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
             IRVNS+ PG+  + + E  +K     K+ ++N   +T P+   G     +++L+ +L 
Sbjct: 192 DNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT-PMGRAGKPQE-VSALIAFLC 249
Query: 252 HDSSEYVSGNIFIVDSGATLPG 273
             ++ Y++G I   D G T  G
Sbjct: 250 FPAASYITGQIIWADGGFTANG 271

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 135/259 (52%), Gaps = 16/259 (6%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           +  +  L+ KV +VTGAS G+G+     LA+ G +++  A      +++ D +    G +
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDN 59
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            + MA  L+V+ N  +IE  ++   + FG +D LVNNAG++      + + EEEW+ IM+
Sbjct: 60  GKGMA--LNVT-NPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIME 115
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TNLT  + +SK V   M    Q G +IN+ S+  T      G   YA++KAG+   TK +
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGN--AGQANYAAAKAGVIGFTKSM 172
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRY 249
           + E+    + VN++ PG  ++++T+ L  +     +A    P    G  DP  + S V +
Sbjct: 173 AREVASRGVTVNTVAPGAIETDMTKALNDEQRTATLAQ--VPAGRLG--DPREIASAVAF 228
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L    + Y++G    V+ G
Sbjct: 229 LASPEAAYITGETLHVNGG 247

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 132/251 (52%), Gaps = 14/251 (5%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           K  +VTGAS G+GR   L LA+ G  + V  A   ++ +++ +EI  +    V + A++ 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQA 67
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW- 137
           +V A+   ++  +++    FG +D LVNNAG++      + + E+EW+ ++ TNL G + 
Sbjct: 68  NV-ADADEVKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGVFN 125
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            + K     +R   + G++IN+SS+        PG   Y ++KAG+  +TK  + EL   
Sbjct: 126 CIQKATPQMLR--QRSGAIINLSSVVGAVGN--PGQANYVATKAGVIGLTKSAARELASR 181
Query: 198 KIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY 257
            I VN++ PG   S++T+ L   D L        PL  FG  D  + + V +L  D ++Y
Sbjct: 182 GITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKY 238
Query: 258 VSGNIFIVDSG 268
           ++G    V+ G
Sbjct: 239 ITGQTIHVNGG 249

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 16/259 (6%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           +  +  L+ KV +VTGAS G+G+     LA+ G +++  A      +++ D +    G +
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDN 59
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            + MA  L+V+ N  +IE  ++   + FG +D LVNNAG++      + + EEEW+ IM+
Sbjct: 60  GKGMA--LNVT-NPESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIME 115
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TNLT  + +SK V   M    Q G +IN+ S+  T      G   +A++KAG+   TK +
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGN--AGQANFAAAKAGVIGFTKSM 172
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRY 249
           + E+    + VN++ PG  ++++T+ L  +     +A    P    G  DP  + S V +
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLG--DPREIASAVAF 228
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L    + Y++G    V+ G
Sbjct: 229 LASPEAAYITGETLHVNGG 247

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 139/280 (49%), Gaps = 37/280 (13%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA------------AARRVDRLKSLCDEI 63
           +L  KV  +TGA+ G GR   + LA+ G  IVA            A    + LK     +
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102
Query: 64  NKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLT 121
            +Q     R +A + DV  + A+++  V +A   FG ID LV+N G+S  G V S   LT
Sbjct: 103 EEQG---RRIIARQADVR-DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVS---LT 155
Query: 122 EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKA 181
           +++W+ I++TNL G+W   + V   M +  Q GSVI +SS     RG  PG   YA+SK 
Sbjct: 156 DQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL-RG-APGQSHYAASKH 213
Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSE--ITEGLMKKDWLNNVASRT--------- 230
           G+  +   L+ E+G H IRVNS+ PG   +E  + E L+K  +L ++ + T         
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKM-FLPHLENPTREDAAELFS 272
Query: 231 -YPLRDFGTTDPA-LTSLVRYLVHDSSEYVSGNIFIVDSG 268
              L      +P  +++ V +L  D + Y+ G    VD G
Sbjct: 273 QLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 134/259 (51%), Gaps = 16/259 (6%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           +  +  L+ KV +VTGAS G+G+     LA+ G +++  A      +++ D +    G +
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDN 59
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            + MA  L+V+ N  +IE  ++   + FG +D LVNNA ++      + + EEEW+ IM+
Sbjct: 60  GKGMA--LNVT-NPESIEAVLKAITDEFGGVDILVNNAAIT-RDNLLMRMKEEEWSDIME 115
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TNLT  + +SK V   M    Q G +IN+ S+  T      G   YA++KAG+   TK +
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGN--AGQANYAAAKAGVIGFTKSM 172
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRY 249
           + E+    + VN++ PG  ++++T+ L  +     +A    P    G  DP  + S V +
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLG--DPREIASAVAF 228
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L    + Y++G    V+ G
Sbjct: 229 LASPEAAYITGETLHVNGG 247

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 142/262 (54%), Gaps = 17/262 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NKQSGSSVRAM 74
           L  +V +VTG ++G+G+    +L + G  +V A+R+++RLKS  DE+  N       R +
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNL 133
            ++ ++  N   + N V+   + FG+I+ LVNN G  G   SP + ++ + W+ +++TNL
Sbjct: 76  PIQCNIR-NEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNL 132
Query: 134 TGSWLVSKYVCIR-MRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           TG++ + K V    M++    GS++NI  I  T  G  P  V   +++AG+  +TK L+L
Sbjct: 133 TGTFYMCKAVYSSWMKE--HGGSIVNI--IVPTKAG-FPLAVHSGAARAGVYNLTKSLAL 187
Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY---PLRDFGTTDPALTSLVRY 249
           E     IR+N + PG+  S+ T       W  +    ++   P +  G  +  ++S+V +
Sbjct: 188 EWACSGIRINCVAPGVIYSQ-TAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCF 245
Query: 250 LVHDSSEYVSGNIFIVDSGATL 271
           L+  ++ +++G    VD G +L
Sbjct: 246 LLSPAASFITGQSVDVDGGRSL 267

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 32/265 (12%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  KV +V+G + G+G      +   G ++V           + DE  K   + +   A
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVV--------FGDILDEEGKAMAAELADAA 55
Query: 76  --VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
             V LDV+   A  + +V  A  AFG +  LVNNAG+   + +  D    EW  I+  NL
Sbjct: 56  RYVHLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNL 113
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA---YASSKAGLNAMTKCL 190
           TG +L  + V   M++A + GS+INISSI       L G VA   Y ++K  +  +TK  
Sbjct: 114 TGVFLGIRAVVKPMKEAGR-GSIINISSIEG-----LAGTVACHGYTATKFAVRGLTKST 167
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRY 249
           +LELG   IRVNSI PGL K+ +T      DW+     +T   R     +P  +++LV Y
Sbjct: 168 ALELGPSGIRVNSIHPGLVKTPMT------DWVPEDIFQTALGR---AAEPVEVSNLVVY 218
Query: 250 LVHDSSEYVSGNIFIVDSGATLPGL 274
           L  D S Y +G  F+VD G T+ GL
Sbjct: 219 LASDESSYSTGAEFVVD-GGTVAGL 242

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 10/253 (3%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTG++ GLG  +   LA AG R++    R   L    D + ++      A  V
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGV 63
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             DV+ +  AIE +  K       +D L+NNAG+    + P+ +L  E W  ++ TNLT 
Sbjct: 64  AFDVT-DELAIEAAFSKLDAEGIHVDILINNAGIQ--YRKPMVELELENWQKVIDTNLTS 120
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++LVS+    RM   N  G +INI S+  TS+   P    Y ++K G+  +T  ++ E  
Sbjct: 121 AFLVSRSAAKRMIARNSGGKIINIGSL--TSQAARPTVAPYTAAKGGIKMLTCSMAAEWA 178
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              I+ N+I PG   +++   L++    ++    + P + +G  +  + + + +L   +S
Sbjct: 179 QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAI-FLSSKAS 237
Query: 256 EYVSGNIFIVDSG 268
           +Y++G I  VD G
Sbjct: 238 DYINGQIIYVDGG 250

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 132/259 (50%), Gaps = 16/259 (6%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           +  +  L+ KV +VTGAS G+G+     LA+ G +++  A      +++ D +    G +
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDN 59
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            + MA+ +    N  +IE  ++   + FG +D LVNNA ++      + + EEEW+ IM+
Sbjct: 60  GKGMALNV---TNPESIEAVLKAITDEFGGVDILVNNADIT-RDNLLMRMKEEEWSDIME 115
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TNLT  + +SK V   M    Q G +IN+ S+  T      G   YA++KAG+   TK +
Sbjct: 116 TNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTMGN--AGQANYAAAKAGVIGFTKSM 172
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRY 249
           + E+    + VN++ PG  ++++T+ L  +     +A    P    G  DP  + S V +
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VPAGRLG--DPREIASAVAF 228
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L    + Y++G    V+ G
Sbjct: 229 LASPEAAYITGETLHVNGG 247

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 8/259 (3%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L NKVV+VTGA SG+GR      A     +VA     DRL  +  E+    G     
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR---GMGKEV 58
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
           + V+ DVS     +E  V++ +E + RID L NNAG+   V    ++++E W  ++  NL
Sbjct: 59  LGVKADVSKK-KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
             ++  S+ V   M    + G ++N +SIA   RG   G   Y  +K GL  +T+ ++  
Sbjct: 118 YSAFYSSRAVIPIMLKQGK-GVIVNTASIAGI-RGGFAGA-PYTVAKHGLIGLTRSIAAH 174
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLN-NVASRTYPLRDFGTTDPALTSLVRYLVH 252
            G   IR  ++ PG  K+ I  G  K   L     ++   L         + +++ +L  
Sbjct: 175 YGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLAS 234
Query: 253 DSSEYVSGNIFIVDSGATL 271
           D + +V+G+  +VD G T+
Sbjct: 235 DEASFVNGDAVVVDGGLTV 253

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L+ +V +VTG  SG+GR      AK G  +V A    D    + +EI        +A  
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS------KAFG 77
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V +DVS+   A E+ V+K    +GR+D LVNNAG  G   + + + EE W+ I   N+ G
Sbjct: 78  VRVDVSSAKDA-ESXVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIXSVNVKG 135
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L SKYV I +   N  GS+IN +S  ATS   +    AY +SK  ++++T+  + +  
Sbjct: 136 IFLCSKYV-IPVXRRNGGGSIINTTSYTATS--AIADRTAYVASKGAISSLTRAXAXDHA 192
Query: 196 VHKIRVNSICPG-----LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
              IRVN++ PG      F     E        ++  +R   + D   T   +     +L
Sbjct: 193 KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR--AVXDRXGTAEEIAEAXLFL 250
Query: 251 VHDSSEYVSGNIFIVDSGATL 271
             D S + +G+I  VD G+++
Sbjct: 251 ASDRSRFATGSILTVDGGSSI 271

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 18/253 (7%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           K  +VTGAS G+GR   L LA+ G  + V  A   ++ +++ +EI  +    V + A++ 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQA 61
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLTGS 136
           +V A+   ++  +++    FG +D LVNNAG++   +  L     E+EW+ ++ TNL G 
Sbjct: 62  NV-ADADEVKAXIKEVVSQFGSLDVLVNNAGIT---RDNLLXRXKEQEWDDVIDTNLKGV 117
Query: 137 W-LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  + K     +R   + G++IN+SS+        PG   Y ++KAG+  +TK  + EL 
Sbjct: 118 FNCIQKATPQXLR--QRSGAIINLSSVVGAVGN--PGQANYVATKAGVIGLTKSAARELA 173
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              I VN++ PG   S+ T+ L   D L        PL  FG  D  + + V +L  D +
Sbjct: 174 SRGITVNAVAPGFIVSDXTDAL--SDELKEQXLTQIPLARFG-QDTDIANTVAFLASDKA 230
Query: 256 EYVSGNIFIVDSG 268
           +Y++G    V+ G
Sbjct: 231 KYITGQTIHVNGG 243

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  N+ ++V GA   +GR   +  A+ G  +V          +      ++ G S  A+A
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS--ALA 62
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           ++ D++ N A +E ++  A + FG I  LV+ AG   A K+  ++ E  W+ ++  NLT 
Sbjct: 63  IKADLT-NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTS 121
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L +K    +M    + G+++  SS A    G  PG +AYA+SK  +   T+ L+ E+G
Sbjct: 122 LFLTAKTALPKM---AKGGAIVTFSSQAGRDGGG-PGALAYATSKGAVMTFTRGLAKEVG 177
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
             KIRVN++CPG+  +   +   K +    VA  T   R+  + D A   LV +L  D +
Sbjct: 178 -PKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVA--GLVAFLASDDA 234
Query: 256 EYVSGNIFIVDSG 268
            YV+G  + ++ G
Sbjct: 235 AYVTGACYDINGG 247

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 18/247 (7%)
Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA 82
           +VTGA  G+GR+    L  +G ++VA  R    L SL  E        +  + V+L    
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDL---- 61
Query: 83  NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWLVSK 141
                 ++ +KA    G +D LVNNA +   +  P L++T+E ++     NL   + VS+
Sbjct: 62  ---GDWDATEKALGGIGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 116
Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRV 201
            V   M +    GS++N+SS+ A      P  + Y+S+K  +  +TK +++ELG HKIRV
Sbjct: 117 MVARDMINRGVPGSIVNVSSMVA--HVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 174
Query: 202 NSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGN 261
           NS+ P +  +++ + +             +PLR F   +  + S++ +L+ D S   SG 
Sbjct: 175 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSIL-FLLSDRSASTSGG 233
Query: 262 IFIVDSG 268
             +VD+G
Sbjct: 234 GILVDAG 240

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 135/260 (51%), Gaps = 24/260 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRI----VAAARRVDRLKSLCDEINKQSGSSV 71
           Q   K V++TGAS G+G E    LA  G ++     + A   D LK+  +E         
Sbjct: 26  QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE------KGY 79
Query: 72  RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT 131
           +A  ++ D ++    IE ++Q   ++ G +  LVNNAGV    K  + +  E+++H++  
Sbjct: 80  KAAVIKFDAASESDFIE-AIQTIVQSDGGLSYLVNNAGVVRD-KLAIKMKTEDFHHVIDN 137
Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           NLT +++  +   +++   ++ GSV+N++SI    RG + G   Y++SK G+ AM+K  +
Sbjct: 138 NLTSAFIGCRE-ALKVMSKSRFGSVVNVASIIG-ERGNM-GQTNYSASKGGMIAMSKSFA 194
Query: 192 LELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
            E  +  IR NS+ PG  ++++   L   +K D++ N+     PL   G+    +   V 
Sbjct: 195 YEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNI-----PLNRLGSAKE-VAEAVA 248
Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L+ D S Y++G    V+ G
Sbjct: 249 FLLSDHSSYITGETLKVNGG 268

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 135/255 (52%), Gaps = 23/255 (9%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           VV+VTGAS G+G+   L L KAGC++ V  AR     + +  +I    G   +A+    D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGGD 59
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLTGSW 137
           VS   A +E  ++ A +A+G ID +VNNAG++   +  L   + + +W+ ++  NLTG +
Sbjct: 60  VSKE-ADVEAMMKTAIDAWGTIDVVVNNAGIT---RDTLLIRMKKSQWDEVIDLNLTGVF 115
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L ++    ++    ++G +INI+S+     G + G   YA++KAG+   +K  + E    
Sbjct: 116 LCTQ-AATKIMMKKRKGRIINIASVVGLI-GNI-GQANYAAAKAGVIGFSKTAAREGASR 172
Query: 198 KIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL-VHD 253
            I VN +CPG   S++T  L   M+K  L      T PL   G  +  +  LV +L +  
Sbjct: 173 NINVNVVCPGFIASDMTAKLGEDMEKKILG-----TIPLGRTGQPEN-VAGLVEFLALSP 226
Query: 254 SSEYVSGNIFIVDSG 268
           ++ Y++G  F +D G
Sbjct: 227 AASYITGQAFTIDGG 241

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 25/268 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L+NKV ++TGA  G+G E    LA+AG R+V A      L      + + +   V  + 
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLT 67
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL-----TEEEWNHIMK 130
            E+ V A        +    + FGR+D + NNA  S     P D+     T + W+    
Sbjct: 68  NEVSVRA-------LIDFTIDTFGRLDIVDNNAAHS----DPADMLVTQMTVDVWDDTFT 116
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N  G+ L+ KY   R+  A   G+++NISS  AT+        AYA +KA +  +T+ +
Sbjct: 117 VNARGTMLMCKYAIPRLISAGG-GAIVNISS--ATAHAAYDMSTAYACTKAAIETLTRYV 173
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRY 249
           + + G H +R N+I PGL ++   E  + +  ++  A+     R     +P  +  LV +
Sbjct: 174 ATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGR---IGEPHEIAELVCF 230
Query: 250 LVHDSSEYVSGNIFIVDSG--ATLPGLP 275
           L  D + +++G +   DSG  A LPGLP
Sbjct: 231 LASDRAAFITGQVIAADSGLLAHLPGLP 258

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 16/255 (6%)
Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
              + K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN------GK 54
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
            + L+V+ + A+IE+ ++K    FG +D LVNNAG++      + + +EEWN I++TNL+
Sbjct: 55  GLMLNVT-DPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLS 112
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA-YASSKAGLNAMTKCLSLE 193
             + +SK V +R     + G +I I S+  T      GG A YA++KAGL   +K L+ E
Sbjct: 113 SVFRLSKAV-MRAMMKKRHGRIITIGSVVGT---MGNGGQANYAAAKAGLIGFSKSLARE 168
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           +    I VN + PG  ++++T  L   D    + ++    R  G  + A  + V +L  D
Sbjct: 169 VASRGITVNVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIA--NAVAFLASD 225
Query: 254 SSEYVSGNIFIVDSG 268
            + Y++G    V+ G
Sbjct: 226 EAAYITGETLHVNGG 240

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 132/278 (47%), Gaps = 38/278 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA----------------AARRVDRLKSLC 60
           L  +V  +TGA+ G GR   + LA  G  I+A                +   +D    L 
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 61  DEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPL 118
           ++  +      +A+   LDV  + AA+   V    E FGR+D +V NAGV   G V    
Sbjct: 73  EDQGR------KALTRVLDVR-DDAALRELVADGMEQFGRLDVVVANAGVLSWGRV---W 122
Query: 119 DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS 178
           +LT+E+W+ ++  NLTG+W   +     M +A   GS++ +SS A       PG   Y++
Sbjct: 123 ELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--ATPGNGHYSA 180
Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI--TEGLMK-----KDWLNNVASRTY 231
           SK GL A+T  L++ELG + IRVNSI P   ++ +   E +M+       ++++      
Sbjct: 181 SKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPV 240
Query: 232 PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA 269
               F T D  +  +V +L  D S  ++G    VD GA
Sbjct: 241 QPNGFMTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGA 277

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 134/263 (50%), Gaps = 17/263 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTG + G+GR      A+AG  +  AAR    L S+  E+ +    +V  + V
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNV--IGV 96
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTG 135
            LDVS  G+   ++ +   +AFG +D +  NAG+    +  LD +T E+ + ++  N+ G
Sbjct: 97  RLDVSDPGSC-ADAARTVVDAFGALDVVCANAGIFPEAR--LDTMTPEQLSEVLDVNVKG 153
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           + + +   C+    A+  G VI  SSI     G  PG   Y +SKA      +  ++EL 
Sbjct: 154 T-VYTVQACLAPLTASGRGRVILTSSITGPVTG-YPGWSHYGASKAAQLGFMRTAAIELA 211
Query: 196 VHKIRVNSICPGLFKSEITEGL--MKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVH 252
              + VN+I PG   + +TEGL  M +++++ +A R+ P+   G+  P  +  L  +L  
Sbjct: 212 PRGVTVNAILPG---NILTEGLVDMGEEYISGMA-RSIPMGMLGS--PVDIGHLAAFLAT 265
Query: 253 DSSEYVSGNIFIVDSGATLPGLP 275
           D + Y++G   +VD G  LP  P
Sbjct: 266 DEAGYITGQAIVVDGGQVLPESP 288

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA--AARRVDRLK-------SLCDEINKQ 66
           +++ KV  +TGA+ G GR   + LA+ G  I+A    +++D +K        L + + + 
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
Query: 67  SGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN 126
                R +A ++DV  +  A++ +V       GR+D ++ NA ++        +  + W 
Sbjct: 85  EALGRRIIASQVDVR-DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWR 143
Query: 127 HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
            ++  NL G+W+ ++     +    + GS++  SSI      +  G   Y +SK GL+ +
Sbjct: 144 DMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGN--YIASKHGLHGL 201
Query: 187 TKCLSLELGVHKIRVNSICPG-----LFKSEITEGLMKKDWLN------NVASRTYPLRD 235
            + ++LELG   IRVN +CP      +  +E T  + + D  N       VASR   +  
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP 261
Query: 236 FGTTDPA-LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
               +PA +++ + +LV D + Y++G    VD GA L
Sbjct: 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 16/255 (6%)
Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
              + K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG------K 54
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
            + L+V+ + A+IE+ ++K    FG +D LVNNAG++      + + +EEWN I++TNL+
Sbjct: 55  GLMLNVT-DPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLS 112
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA-YASSKAGLNAMTKCLSLE 193
             + +SK V +R     + G +I I S+  T      GG A +A++KAGL   +K L+ E
Sbjct: 113 SVFRLSKAV-MRAMMKKRHGRIITIGSVVGT---MGNGGQANFAAAKAGLIGFSKSLARE 168
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           +    I VN + PG  ++++T  L   D    + ++    R  G  + A  + V +L  D
Sbjct: 169 VASRGITVNVVAPGFIETDMTRAL-SDDQRAGILAQVPAGRLGGAQEIA--NAVAFLASD 225
Query: 254 SSEYVSGNIFIVDSG 268
            + Y++G    V+ G
Sbjct: 226 EAAYITGETLHVNGG 240

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 24/268 (8%)
Query: 13  PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVR 72
           P  +  ++VV++TG  SGLGR   + LA  G ++         L  +  E  + S ++V 
Sbjct: 7   PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKL--------SLVDVSSEGLEASKAAVL 58
Query: 73  AMAVELDV------SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN 126
             A + +V       ++ A +E  V    E FGRID   NNAG+ G        T  E++
Sbjct: 59  ETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFD 118
Query: 127 HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
            ++  NL G +L  + V   MR+    G V+N +S+    RG +     YA++K G+  +
Sbjct: 119 KVVSINLRGVFLGLEKVLKIMREQGS-GMVVNTASVGGI-RG-IGNQSGYAAAKHGVVGL 175
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-DWLN-NVASRTY----PLRDFGTTD 240
           T+  ++E G + IR+N+I PG   + + E  MK+ D  N   A+  +    P + +G   
Sbjct: 176 TRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEA- 234
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           P + ++V +L+ D + YV+  +  +D G
Sbjct: 235 PEIAAVVAFLLSDDASYVNATVVPIDGG 262

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 132/258 (51%), Gaps = 20/258 (7%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L+ KV +VTGAS G+G+     LA+ G +++  A      +++ D +    G + + 
Sbjct: 4   FXNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDNGKG 59
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKT 131
            A  L+V+ N  +IE  ++   + FG +D LVNNAG++   +  L     EEEW+ I +T
Sbjct: 60  XA--LNVT-NPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLXRXKEEEWSDIXET 113
Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           NLT  + +SK V +R     ++G +IN+ S+  T      G   YA++KAG+   TK  +
Sbjct: 114 NLTSIFRLSKAV-LRGXXKKRQGRIINVGSVVGTXGN--AGQANYAAAKAGVIGFTKSXA 170
Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRYL 250
            E+    + VN++ PG  +++ T+ L  +     +A    P    G  DP  + S V +L
Sbjct: 171 REVASRGVTVNTVAPGFIETDXTKALNDEQRTATLAQ--VPAGRLG--DPREIASAVAFL 226
Query: 251 VHDSSEYVSGNIFIVDSG 268
               + Y++G    V+ G
Sbjct: 227 ASPEAAYITGETLHVNGG 244

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 129/265 (48%), Gaps = 32/265 (12%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  KV +V+G + G G          G ++V           + DE  K   + +   A
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVV--------FGDILDEEGKAXAAELADAA 55
Query: 76  --VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
             V LDV+   A  + +V  A  AFG +  LVNNAG+   + +  D    EW  I+  NL
Sbjct: 56  RYVHLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNL 113
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA---YASSKAGLNAMTKCL 190
           TG +L  + V    ++A + GS+INISSI       L G VA   Y ++K  +  +TK  
Sbjct: 114 TGVFLGIRAVVKPXKEAGR-GSIINISSIEG-----LAGTVACHGYTATKFAVRGLTKST 167
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRY 249
           +LELG   IRVNSI PGL K+  T      DW+     +T   R     +P  +++LV Y
Sbjct: 168 ALELGPSGIRVNSIHPGLVKTPXT------DWVPEDIFQTALGR---AAEPVEVSNLVVY 218
Query: 250 LVHDSSEYVSGNIFIVDSGATLPGL 274
           L  D S Y +G  F+VD G T+ GL
Sbjct: 219 LASDESSYSTGAEFVVD-GGTVAGL 242

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 15/259 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTG + G+GR      A+AG  +  A R    + +   +++ Q GS  + + V
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLD-QLGSG-KVIGV 65
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           + DVS + A  +    +A E FG ID +  NAGV     +PL  +T E+ N I   N+ G
Sbjct: 66  QTDVS-DRAQCDALAGRAVEEFGGIDVVCANAGVF--PDAPLATMTPEQLNGIFAVNVNG 122
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++   +  C+    A+  G V+  SSI     G  PG   Y ++KA      +  ++EL 
Sbjct: 123 TFYAVQ-ACLDALIASGSGRVVLTSSITGPITG-YPGWSHYGATKAAQLGFMRTAAIELA 180
Query: 196 VHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
            HKI VN+I PG   + +TEGL++  ++++ ++A R+ P    GT +  +  L  +L   
Sbjct: 181 PHKITVNAIMPG---NIMTEGLLENGEEYIASMA-RSIPAGALGTPED-IGHLAAFLATK 235
Query: 254 SSEYVSGNIFIVDSGATLP 272
            + Y++G    VD G  LP
Sbjct: 236 EAGYITGQAIAVDGGQVLP 254

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L NKV +VT ++ G+G      LA+ G  +V ++R+   +      +  + G SV     
Sbjct: 13  LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE-GLSVTGTVC 71
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +  + +    E  V  A +  G ID LV+NA V+    S +D+TEE W+  +  N+   
Sbjct: 72  HVGKAEDR---ERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAP 128
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            L++K V   M +    GSV+ +SSIAA S    PG   Y  SK  L  +TK L++EL  
Sbjct: 129 ALMTKAVVPEM-EKRGGGSVVIVSSIAAFSPS--PGFSPYNVSKTALLGLTKTLAIELAP 185
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             IRVN + PGL K+  +  L            T  +R  G  +     +V +L  + + 
Sbjct: 186 RNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDC-AGIVSFLCSEDAS 244
Query: 257 YVSGNIFIVDSG 268
           Y++G   +V  G
Sbjct: 245 YITGETVVVGGG 256

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 9/212 (4%)
Query: 10  DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS 69
           D +    L  +V +VTGAS G+G      L   G R+V  AR V++L+++  EI   +G 
Sbjct: 20  DDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREI-VAAGG 78
Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHI 128
              + A +L  S   AA    V     A GR D LVNNAGV G    PL  +   EW+ +
Sbjct: 79  EAESHACDLSHSDAIAAFATGV---LAAHGRCDVLVNNAGV-GWFGGPLHTMKPAEWDAL 134
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           +  NL   +L+ +     M  A + G +INISS+A   +  +  G AY +SK GLN +  
Sbjct: 135 IAVNLKAPYLLLRAFAPAMI-AAKRGHIINISSLA--GKNPVADGAAYTASKWGLNGLMT 191
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKK 220
             + EL  H++RV+ + PG  ++E   GL  K
Sbjct: 192 SAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK 223

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 133/255 (52%), Gaps = 18/255 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +++ +VTGAS G+GR   L+LA AG ++  A        +  + +   + +   A AV
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKV--AVNYASSAGAADEVVAAIAAAGGEAFAV 83
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + DVS   + +E       E +GR+D LVNNAG++      L +  ++W  ++  NL G 
Sbjct: 84  KADVSQE-SEVEALFAAVIERWGRLDVLVNNAGITRDTLL-LRMKRDDWQSVLDLNLGGV 141
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLEL 194
           +L S+    ++    + G +INI+S+     G++  PG   Y+++KAG+  +TK ++ EL
Sbjct: 142 FLCSRAAA-KIMLKQRSGRIINIASVV----GEMGNPGQANYSAAKAGVIGLTKTVAKEL 196
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD- 253
               I VN++ PG   +++T  L  +  L  +     PL  +G     +  +VR+L  D 
Sbjct: 197 ASRGITVNAVAPGFIATDMTSELAAEKLLEVI-----PLGRYGEA-AEVAGVVRFLAADP 250
Query: 254 SSEYVSGNIFIVDSG 268
           ++ Y++G +  +D G
Sbjct: 251 AAAYITGQVINIDGG 265

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 13/258 (5%)
Query: 13  PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKS-LCDEINKQSGSS 70
           P      +V  VTG   GLG      L  AG  + V+ + R D + + L  E  + +G  
Sbjct: 19  PGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHE--RDAGRD 76
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            +A AV++   A+  + E   +K    FG++D L+NNAG++    + + +T+ +W+ +M+
Sbjct: 77  FKAYAVDV---ADFESCERCAEKVLADFGKVDVLINNAGITRDA-TFMKMTKGDWDAVMR 132
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           T+L   + V+K     M +  + G ++NI S+   SRG   G   YAS+KAG++  TK L
Sbjct: 133 TDLDAMFNVTKQFIAGMVE-RRFGRIVNIGSVNG-SRGAF-GQANYASAKAGIHGFTKTL 189
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           +LE     I VN++ PG   + + E +  +D L        P+   G  D  + +L+ +L
Sbjct: 190 ALETAKRGITVNTVSPGYLATAMVEAV-PQDVLEAKILPQIPVGRLGRPDE-VAALIAFL 247
Query: 251 VHDSSEYVSGNIFIVDSG 268
             D + +V+G    ++ G
Sbjct: 248 CSDDAGFVTGADLAINGG 265

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 22/258 (8%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA--ARRVDRLKSLCDEINKQSGSSVRAM 74
           +  ++  VTG   G+G   C  L K G R+VA        R+K L D+         +A+
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ---------KAL 61
Query: 75  AVELDVSANGAAIENSVQKAWEAF----GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
             +   S       +S ++A++      G ID LVNNAG++  V     +T E+W  ++ 
Sbjct: 62  GFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFR-KMTREDWQAVID 120
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TNLT  + V+K V   M +    G +INISS+    +GQ  G   Y+++KAG++  T  L
Sbjct: 121 TNLTSLFNVTKQVIDGMVERGW-GRIINISSVNG-QKGQF-GQTNYSTAKAGIHGFTMSL 177
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           + E+    + VN++ PG   +++ + + + D L  + + T P+R  G+ D  + S+V +L
Sbjct: 178 AQEVATKGVTVNTVSPGYIGTDMVKAI-RPDVLEKIVA-TIPVRRLGSPDE-IGSIVAWL 234
Query: 251 VHDSSEYVSGNIFIVDSG 268
             + S + +G  F ++ G
Sbjct: 235 ASEESGFSTGADFSLNGG 252

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 132/262 (50%), Gaps = 18/262 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +  KV ++TG+SSG+G       AK G  IV  AR+VDRL      + ++ G  VR + V
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEV 62
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +DV A    ++  V+    +FG  D LVNNAG +G+ ++ ++  +E+W    + ++  +
Sbjct: 63  AVDV-ATPEGVDAVVESVRSSFGGADILVNNAG-TGSNETIMEAADEKWQFYWELHVMAA 120
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +++ +   MR A   G++I+ +SI A     L     Y  +KA L   +K L+ E+  
Sbjct: 121 VRLARGLVPGMR-ARGGGAIIHNASICAVQ--PLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 197 HKIRVNSICPGLF--------KSEITE--GLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
             IRVN I PGL           E+T+  G   K +L +VA    P++ F + +  L + 
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEE-LANF 236
Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
             +L  + + Y  G+ + VD G
Sbjct: 237 FVFLCSERATYSVGSAYFVDGG 258

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 19/257 (7%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDL-AKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           +L  K ++VTGA+SG+GR   LDL A+ G  +VA    VDR + L  E      +   A+
Sbjct: 3   RLSGKTILVTGAASGIGRA-ALDLFAREGASLVA----VDREERLLAEAVAALEAEAIAV 57
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
               DVS +  A+E    +A E FGR+  + + AGV+ +  S  +L  E W  +++ NLT
Sbjct: 58  VA--DVS-DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS-WNLPLEAWEKVLRVNLT 113
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           GS+LV++     + +    GS++   S+A      L     YA+ K G+  + + L+LEL
Sbjct: 114 GSFLVARKAGEVLEEG---GSLVLTGSVAGLGAFGL---AHYAAGKLGVVGLARTLALEL 167
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
               +RVN + PGL ++ +T GL    W   V +   PL   G  +    + + +L+ + 
Sbjct: 168 ARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGAS--PLGRAGRPEEVAQAAL-FLLSEE 224
Query: 255 SEYVSGNIFIVDSGATL 271
           S Y++G    VD G ++
Sbjct: 225 SAYITGQALYVDGGRSI 241

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 28/281 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-------ARRVDRL------KSLCDE 62
           +++ KV  VTGA+ G GR   + LA+ G  I+A        A  VD        + L + 
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67
Query: 63  INKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE 122
            +   G + R +  E+DV  +  A++ +V    E  GR+D +V NAG+     +    +E
Sbjct: 68  ADLVKGHNRRIVTAEVDVR-DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126
Query: 123 EEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAG 182
           E+W  ++  NL G W   K     M    + GS+I  SS+        P    Y ++K G
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK--AYPHTGHYVAAKHG 184
Query: 183 LNAMTKCLSLELGVHKIRVNSICPGLFKS-----EITEGLMKKDWLNNVASRTYPLRDFG 237
           +  + +   +ELG H IRVNS+ P   K+     E T  + + D  N       P+    
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244
Query: 238 TTDPA-------LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            T P        +++ V +   D + Y++G    +D+G+ L
Sbjct: 245 HTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 18/263 (6%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KVV++TG SSG G+      AK G R+V   R  ++L+    EI +  G   + + V+ D
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG---QILTVQXD 63
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWL 138
           V  N   I+  +++  E FGRID L+NNA  +G    P  DL+   WN ++   L G++ 
Sbjct: 64  VR-NTDDIQKXIEQIDEKFGRIDILINNA--AGNFICPAEDLSVNGWNSVINIVLNGTFY 120
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG-VH 197
            S+ +     +   +G++IN  +  A   G  PG +  A++KAG+ A TK L++E G  +
Sbjct: 121 CSQAIGKYWIEKGIKGNIINXVATYAWDAG--PGVIHSAAAKAGVLAXTKTLAVEWGRKY 178
Query: 198 KIRVNSICPGLFKSEITEGLMKKDWLN-NVASRT---YPLRDFGTTDPALTSLVRYLVHD 253
            IRVN+I PG  +     G   K W++   A RT    PL   GT +  +  L  YL  D
Sbjct: 179 GIRVNAIAPGPIER---TGGADKLWISEEXAKRTIQSVPLGRLGTPE-EIAGLAYYLCSD 234
Query: 254 SSEYVSGNIFIVDSGATLPGLPI 276
            + Y++G     D G  L   P 
Sbjct: 235 EAAYINGTCXTXDGGQHLHQYPF 257

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 20/258 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTGA+ GLG      L   G  +     R ++LK L  E+ +      R    
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGE------RIFVF 61
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLT 134
             ++S +  A++   QKA E  G +D LVNNAG++   +  L   +++E+W+ ++  NLT
Sbjct: 62  PANLS-DREAVKALGQKAEEEMGGVDILVNNAGIT---RDGLFVRMSDEDWDAVLTVNLT 117
Query: 135 GSW-LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
             + L  +     MR  N  G +INI+SI   +    PG   Y +SKAGL   +K L+ E
Sbjct: 118 SVFNLTRELTHPMMRRRN--GRIINITSIVGVTGN--PGQANYCASKAGLIGFSKSLAQE 173
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           +    + VN I PG  +S +T  L +K    +      P++  G     + + V YL  D
Sbjct: 174 IASRNVTVNCIAPGFIESAMTGKLNEKQ--KDAIMGNIPMKRMG-VGADIAAAVVYLASD 230
Query: 254 SSEYVSGNIFIVDSGATL 271
            + YV+G    V+ G  +
Sbjct: 231 EAAYVTGQTLHVNGGMAM 248

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 20/258 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTGA+ GLG      L   G  +     R ++LK L  E+ +      R    
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGE------RIFVF 58
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLT 134
             ++S +  A++   QKA E  G +D LVNNAG++   +  L   +++E+W+ ++  NLT
Sbjct: 59  PANLS-DREAVKALGQKAEEEMGGVDILVNNAGIT---RDGLFVRMSDEDWDAVLTVNLT 114
Query: 135 GSW-LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
             + L  +     MR  N  G +INI+SI   +    PG   Y +SKAGL   +K L+ E
Sbjct: 115 SVFNLTRELTHPMMRRRN--GRIINITSIVGVTGN--PGQANYCASKAGLIGFSKSLAQE 170
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           +    + VN I PG  +S +T  L +K    +      P++  G     + + V YL  D
Sbjct: 171 IASRNVTVNCIAPGFIESAMTGKLNEKQ--KDAIMGNIPMKRMG-VGADIAAAVVYLASD 227
Query: 254 SSEYVSGNIFIVDSGATL 271
            + YV+G    V+ G  +
Sbjct: 228 EAAYVTGQTLHVNGGMAM 245

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 132/256 (51%), Gaps = 6/256 (2%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LDN+V +VTG +  +G      LA+AG R++ A    + + +   E  +  G  V +  
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD-EAMATKAVEDLRMEGHDVSS-- 66
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V +DV+ N  +++N+V+   E  GR+D LV  AG+  +     D+T+ +W   +  NL G
Sbjct: 67  VVMDVT-NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +   + V  R+    ++G ++ I S++     +     AY +SKAG++   + L+ E  
Sbjct: 126 MFRSCQAVG-RIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA 184
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            H IR N++ P   ++ +T   M+K  L +      P+   G  D  + S+V++L  D++
Sbjct: 185 PHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDE-VASVVQFLASDAA 243
Query: 256 EYVSGNIFIVDSGATL 271
             ++G I  VD+G T+
Sbjct: 244 SLMTGAIVNVDAGFTV 259

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 141/276 (51%), Gaps = 42/276 (15%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  +KV +VTG SSG+G      L + G ++V+ +            ++++S  +V +  
Sbjct: 11  EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVS------------LDEKSDVNV-SDH 57
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE-WNHIMKTNLT 134
            ++DV+ N   ++ +V+K  + +GRID LVNNAG+     SPL LT  E W  I+  N+ 
Sbjct: 58  FKIDVT-NEEEVKEAVEKTTKKYGRIDILVNNAGIEQ--YSPLHLTPTEIWRRIIDVNVN 114
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           GS+L++KY  I +  A   GS+INI+S+   S        AY +SK  L  +T+ ++++ 
Sbjct: 115 GSYLMAKY-TIPVMLAIGHGSIINIASV--QSYAATKNAAAYVTSKHALLGLTRSVAIDY 171
Query: 195 GVHKIRVNSICPGLF---------KSEITE---GLMKK--DWLNNVASRTYPLRDFGTTD 240
              KIR N++CPG           K E+ E    + +K  +W      R +P+   G  +
Sbjct: 172 A-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEW-----GRQHPMGRIGRPE 225
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI 276
             +  +V +L  D S +++G    VD G  L  LPI
Sbjct: 226 -EVAEVVAFLASDRSSFITGACLTVD-GGLLSKLPI 259

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 33/263 (12%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD--EINKQSGSSVRAMAV 76
            K V+VTG + G+GR      A+ G            L +LCD     K+   ++     
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGA-----------LVALCDLRPEGKEVAEAIGGAFF 54
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           ++D+      +   V++A  A GR+D LVNNA ++ A  S L +   EW  +++ NLT  
Sbjct: 55  QVDLEDERERV-RFVEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAP 112
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +S      MR     G+++N++S+      Q     AY +SK GL  +T+ L+L+L  
Sbjct: 113 MHLSALAAREMRKVGG-GAIVNVASVQGLFAEQ--ENAAYNASKGGLVNLTRSLALDLAP 169
Query: 197 HKIRVNSICPGLFKSE-ITEGL--------MKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
            +IRVN++ PG   +E + E +         ++DW +      + LR  G  +  +   V
Sbjct: 170 LRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWED-----LHALRRLGKPE-EVAEAV 223
Query: 248 RYLVHDSSEYVSGNIFIVDSGAT 270
            +L  + + +++G I  VD G T
Sbjct: 224 LFLASEKASFITGAILPVDGGMT 246

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 131/262 (50%), Gaps = 18/262 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +  KV ++TG+SSG+G       AK G  IV  AR+VDRL      + ++ G  VR + V
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEV 62
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +DV A    ++  V+    +FG  D LVNNAG +G+ ++ ++  +E+W    +  +  +
Sbjct: 63  AVDV-ATPEGVDAVVESVRSSFGGADILVNNAG-TGSNETIMEAADEKWQFYWELLVMAA 120
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +++ +   MR A   G++I+ +SI A     L     Y  +KA L   +K L+ E+  
Sbjct: 121 VRLARGLVPGMR-ARGGGAIIHNASICAVQ--PLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 197 HKIRVNSICPGLF--------KSEITE--GLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
             IRVN I PGL           E+T+  G   K +L +VA    P++ F + +  L + 
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEE-LANF 236
Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
             +L  + + Y  G+ + VD G
Sbjct: 237 FVFLCSERATYSVGSAYFVDGG 258

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 29/262 (11%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V++TG + GLG E       AG R+V           L D ++++  ++ R    
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVV-----------LADVLDEEGAATAR---- 47
Query: 77  ELDVSANGAAIENSVQKAW--------EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
           EL  +A    ++ ++++ W        E FG +D LVNNAG+S  +    + + E +  +
Sbjct: 48  ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKV 106
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           ++ NLTG ++  K V   M+DA   GS++NISS A      L    +Y +SK G+  ++K
Sbjct: 107 VEINLTGVFIGMKTVIPAMKDAGG-GSIVNISSAAGLMGLALTS--SYGASKWGVRGLSK 163
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
             ++ELG  +IRVNS+ PG+  + +T     +    N  +   P+   G     +   V 
Sbjct: 164 LAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNT--PMGRVGNEPGEIAGAVV 221
Query: 249 YLVHDSSEYVSGNIFIVDSGAT 270
            L+ D+S YV+G    VD G T
Sbjct: 222 KLLSDTSSYVTGAELAVDGGWT 243

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 81
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 82  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVF 139
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S        L     Y++SK G+   TK L LEL 
Sbjct: 140 RVTKQV-LKAGGMLERGTGRIVNIASTGGKQ--GLVHAAPYSASKHGVVGFTKALGLELA 196
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 197 RTGITVNAVCPGFVETPM 214

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 14/197 (7%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +KV+++TGAS G+G     +L  AG +I+  ARR  R++++  EI    G+   A+A  L
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT---ALAQVL 60
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLTGS- 136
           DV+ +  ++    Q A + +GRID LVNNAGV     SPL   + +EW  ++  N+ G  
Sbjct: 61  DVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVL 117
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           W +   + I   +A + G +INI SI A S   +P    Y ++K  + A++  L  E   
Sbjct: 118 WGIGAVLPI--MEAQRSGQIINIGSIGALS--VVPTAAVYCATKFAVRAISDGLRQE--S 171
Query: 197 HKIRVNSICPGLFKSEI 213
             IRV  + PG+ +SE+
Sbjct: 172 TNIRVTCVNPGVVESEL 188

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTG S G+G      L KAG  +  A   V   +++       +G      AV
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV------AGLENGGFAV 63
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           E+DV+   A+++ ++QKA +A G  D L  NAGVS  ++  +D+T+EEW+     N  G 
Sbjct: 64  EVDVTKR-ASVDAAMQKAIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGV 121
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L ++  C     +N +G ++N +S+AA     L     Y++SK  +   T+ L+ E+  
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLA--HYSASKFAVFGWTQALAREMAP 179
Query: 197 HKIRVNSICPGLFKSEITE 215
             IRVN +CPG  K+ + E
Sbjct: 180 KNIRVNCVCPGFVKTAMQE 198

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 18/252 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  ++TGASSG+G      L K G +++ +    ++LKSL + +            +
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN-------YTI 64
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           E+   AN     N + K       +D LV NAG++    + + + +++++ ++  NL  +
Sbjct: 65  EVCNLANKEECSNLISKT----SNLDILVCNAGITSDTLA-IRMKDQDFDKVIDINLKAN 119
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +++++    +M    + G +INISSI   +    PG   Y +SKAGL  MTK LS E+  
Sbjct: 120 FILNREAIKKMIQ-KRYGRIINISSIVGIAGN--PGQANYCASKAGLIGMTKSLSYEVAT 176
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             I VN++ PG  KS++T+ L +K        +  PL  +G  +    + V +L  +++ 
Sbjct: 177 RGITVNAVAPGFIKSDMTDKLNEKQR--EAIVQKIPLGTYGIPEDVAYA-VAFLASNNAS 233
Query: 257 YVSGNIFIVDSG 268
           Y++G    V+ G
Sbjct: 234 YITGQTLHVNGG 245

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 27/261 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTG+S GLGR     LA AG RI+       R+     E  +  G    A AV
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEF-RNVGHD--AEAV 80
Query: 77  ELDVSANGAAIENSVQKAWEAFGR-------IDALVNNAGVSGAVKSPL-DLTEEEWNHI 128
             DV++    I        EAF R       +D LVNNAG+    + P+ +L   +W  +
Sbjct: 81  AFDVTSESEII--------EAFARLDEQGIDVDILVNNAGIQ--FRKPMIELETADWQRV 130
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           + TNLT ++++ +    RM      G ++NI S+  TS         Y  +K G+  +T+
Sbjct: 131 IDTNLTSAFMIGREAAKRMIPRGY-GKIVNIGSL--TSELARATVAPYTVAKGGIKMLTR 187
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN-VASRTYPLRDFGTTDPALTSLV 247
            ++ E   + I+ N+I PG   +++ + L+     +  V +RT P + +G     + + V
Sbjct: 188 AMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKART-PAKRWGKPQELVGTAV 246
Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L   +S+YV+G I  VD G
Sbjct: 247 -FLSASASDYVNGQIIYVDGG 266

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 25/259 (9%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTGAS G+G+   L+L + G  ++  A      + + + +     + V    +
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKA---NGVEGAGL 81
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLT 134
            LDVS++  ++  +++   +  G+   +VNNAG++   +  L   + ++EW  ++ TNL 
Sbjct: 82  VLDVSSD-ESVAATLEHIQQHLGQPLIVVNNAGIT---RDNLLVRMKDDEWFDVVNTNLN 137
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSI--AATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
             + +SK V   M  A + G +INI S+  A  + GQ      YA++KAGL   T+ L+ 
Sbjct: 138 SLYRLSKAVLRGMTKA-RWGRIINIGSVVGAMGNAGQ----TNYAAAKAGLEGFTRALAR 192
Query: 193 ELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           E+G   I VN++ PG   +++T  L    ++  L  +     PL   G  +  +  +V +
Sbjct: 193 EVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQI-----PLGRLGQAEE-IAKVVGF 246
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  D + YV+G    V+ G
Sbjct: 247 LASDGAAYVTGATVPVNGG 265

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 17/253 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ +  +VTGA++GLG+   + LA AG  +V AARR        D I K  G+   A A+
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGN---ASAL 61
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +D  A+  A ++S   A       D LVNNAG+     S ++ +E +W+ +M  NL   
Sbjct: 62  LIDF-ADPLAAKDSFTDA-----GFDILVNNAGIIRRADS-VEFSELDWDEVMDVNLKAL 114
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRG-QLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  ++     +    + G V+NI+S+ +   G ++P   +Y ++K G+  +TK L+ E  
Sbjct: 115 FFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVP---SYTAAKHGVAGLTKLLANEWA 171
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              I VN+I PG  ++  TE L      N       P   +G ++    + V +L   ++
Sbjct: 172 AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAV-FLSSAAA 230
Query: 256 EYVSGNIFIVDSG 268
           +YV G I  VD G
Sbjct: 231 DYVHGAILNVDGG 243

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 133/272 (48%), Gaps = 24/272 (8%)
Query: 8   CLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQS 67
           C DL     L +KV  +TG  SG+G        + GC  V A+R + R+ +   ++   +
Sbjct: 21  CPDL-----LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT 75
Query: 68  GSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWN 126
           G   R + + +DV A   A+  +V +A + FGRID L+N A  +G    P   L+   + 
Sbjct: 76  GR--RCLPLSMDVRAP-PAVMAAVDQALKEFGRIDILINCA--AGNFLCPAGALSFNAFK 130
Query: 127 HIMKTNLTGSWLVSKYVCIRM-RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
            +M  + +G++ VS+ +  +  RD    G ++NI++    +RGQ    V   S+KA ++A
Sbjct: 131 TVMDIDTSGTFNVSRVLYEKFFRD--HGGVIVNITATLG-NRGQALQ-VHAGSAKAAVDA 186
Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY---PLRDFGTTDPA 242
           MT+ L++E G   IRVNS+ PG      TEGL +        S      PL+  G     
Sbjct: 187 MTRHLAVEWGPQNIRVNSLAPGPISG--TEGLRRLGGPQASLSTKVTASPLQRLGNKT-E 243
Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSGA--TLP 272
           +   V YL    + YV+G + + D GA  T P
Sbjct: 244 IAHSVLYLASPLASYVTGAVLVADGGAWLTFP 275

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 19/263 (7%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVE 77
            K  ++TG++SG+G      LAKAG  IV       D ++++ DE+   S  +V     +
Sbjct: 25  TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPAD 84
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
                  + I +      + FG  D LVNNAGV   V+   D   E+W+ I+  NL+ S+
Sbjct: 85  ---XTKPSEIADXXAXVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
              +   I        G +INI+S  A      P   AY ++K G+  +TK ++LE+   
Sbjct: 141 HTIRG-AIPPXKKKGWGRIINIAS--AHGLVASPFKSAYVAAKHGIXGLTKTVALEVAES 197
Query: 198 KIRVNSICPG-----LFKSEI-----TEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
            + VNSICPG     L + +I     T G+ ++  +N V  +  P + F T +  + SL 
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVE-QVASLA 256
Query: 248 RYLVHDSSEYVSGNIFIVDSGAT 270
            YL  D +  ++G     D G T
Sbjct: 257 LYLAGDDAAQITGTHVSXDGGWT 279

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 77
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 78  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVF 135
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S     +  +     Y++SK G+   TK L LEL 
Sbjct: 136 RVTKQV-LKAGGMLERGTGRIVNIASTGG--KQGVVHAAPYSASKHGVVGFTKALGLELA 192
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 193 RTGITVNAVCPGFVETPM 210

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 17/255 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA- 75
           L  +  +VTGA SG+GR      A+AG  ++A   R D +K + DEI    GS+   +A 
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGGGSAEAVVAD 87
Query: 76  -VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNL 133
             +L+ +AN       V +   A  R+D LVNNAG+    ++P  +++   W  ++  NL
Sbjct: 88  LADLEGAAN-------VAEELAATRRVDVLVNNAGI--IARAPAEEVSLGRWREVLTVNL 138
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
             +W++S+     M  A+  G ++ I+S+ +   G+     AYA+SK  +  +T+ L+ E
Sbjct: 139 DAAWVLSRSFGTAML-AHGSGRIVTIASMLSFQGGRNV--AAYAASKHAVVGLTRALASE 195
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                + VN++ PG   +  T  L   D      +   P   + T +  +   V +L  D
Sbjct: 196 WAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAV-FLASD 254
Query: 254 SSEYVSGNIFIVDSG 268
           ++ YV G +  VD G
Sbjct: 255 AASYVHGQVLAVDGG 269

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+NKV +VT ++ G+G      LA+ G  +V ++R+ + +      +  + G SV     
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVC 70
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +  + +    E  V  A    G +D LV+NA V+    + +D TEE W+ I+  N+  +
Sbjct: 71  HVGKAEDR---ERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKAT 127
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            L++K V   M +    GSV+ +SS+ A      P    Y  SK  L  +TK L++EL  
Sbjct: 128 VLMTKAVVPEM-EKRGGGSVLIVSSVGAYH--PFPNLGPYNVSKTALLGLTKNLAVELAP 184
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             IRVN + PGL K+  ++ L            +  +R  G  +     +V +L  + + 
Sbjct: 185 RNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDC-AGIVSFLCSEDAS 243
Query: 257 YVSGNIFIVDSG 268
           Y++G   +V  G
Sbjct: 244 YITGETVVVGGG 255

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 81
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 82  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVF 139
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S     +  +     Y++SK G+   TK L LEL 
Sbjct: 140 RVTKQV-LKAGGMLERGTGRIVNIASTG--GKQGVVHAAPYSASKHGVVGFTKALGLELA 196
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 197 RTGITVNAVCPGFVETPM 214

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 81
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 82  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVF 139
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S     +  +     Y++SK G+   TK L LEL 
Sbjct: 140 RVTKQV-LKAGGMLERGTGRIVNIASTG--GKQGVVHAAPYSASKHGVVGFTKALGLELA 196
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 197 RTGITVNAVCPGFVETPM 214

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 5   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 61
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 62  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVF 119
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S     +  +     Y++SK G+   TK L LEL 
Sbjct: 120 RVTKQV-LKAGGMLERGTGRIVNIASTG--GKQGVVHAAPYSASKHGVVGFTKALGLELA 176
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 177 RTGITVNAVCPGFVETPM 194

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 34/264 (12%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V++TG + GLG E       AG R+V           L D ++++  ++ R    
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVV-----------LADVLDEEGAATAR---- 47
Query: 77  ELDVSANGAAIENSVQKAW--------EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
           EL  +A    ++ ++++ W        E FG +D LVNNAG+S  +    + + E +  +
Sbjct: 48  ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKV 106
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           ++ NLTG ++  K V   M+DA   GS++NISS A      L    +Y +SK G+  ++K
Sbjct: 107 VEINLTGVFIGMKTVIPAMKDAGG-GSIVNISSAAGLMGLALTS--SYGASKWGVRGLSK 163
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPA-LTSL 246
             ++ELG  +IRVNS+ PG+  + +T     +    N     YP    G   +P  +   
Sbjct: 164 LAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN-----YPNTPMGRVGEPGEIAGA 218
Query: 247 VRYLVHDSSEYVSGNIFIVDSGAT 270
           V  L+ D+S YV+G    VD G T
Sbjct: 219 VVKLLSDTSSYVTGAELAVDGGWT 242

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 77
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 78  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRLGG-GATAELADELWLDVVETNLTGVF 135
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S     +  +     Y++SK G+   TK L LEL 
Sbjct: 136 RVTKQV-LKAGGMLERGTGRIVNIASTGG--KQGVVHAAPYSASKHGVVGFTKALGLELA 192
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 193 RTGITVNAVCPGFVETPM 210

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 16/257 (6%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           D  VV+VTG S G+G   C   A+ G R+ V  A   +   ++   I +  G    A+A+
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG---EAVAI 81
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE---EEWNHIMKTNL 133
             DV  N A I          FGR+D LVNNAG+   V  P  + E   E     ++ N+
Sbjct: 82  PGDV-GNAADIAAXFSAVDRQFGRLDGLVNNAGI---VDYPQRVDEXSVERIERXLRVNV 137
Query: 134 TGSWLVSKYVCIRMRD--ANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           TGS L +     R     + Q G+++N+SS AA   G     V YA+SKA ++  T  L+
Sbjct: 138 TGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAI-LGSATQYVDYAASKAAIDTFTIGLA 196
Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
            E+    IRVN++ PG+ ++++       D     A  + P +  G  +    +++ YL+
Sbjct: 197 REVAAEGIRVNAVRPGIIETDLHASGGLPDRAREXAP-SVPXQRAGXPEEVADAIL-YLL 254
Query: 252 HDSSEYVSGNIFIVDSG 268
             S+ YV+G+I  V  G
Sbjct: 255 SPSASYVTGSILNVSGG 271

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 9/254 (3%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           ++V +VTGASSG G          G R+ A     + L+            + + + V  
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR--THWHAYADKVLRVRA 59
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE--EEWNHIMKTNLTGS 136
           DV+  G  +  ++    E FG ID LVNNAG++G  ++ +  T   E+++ +M  N+ G 
Sbjct: 60  DVADEGD-VNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGI 118
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L  + V   M      G ++NI+S+A  S    PG  AY +SK  +  +TK ++++   
Sbjct: 119 FLGCRAVLPHML-LQGAGVIVNIASVA--SLVAFPGRSAYTTSKGAVLQLTKSVAVDYAG 175
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             IR N++CPG+ ++ +T+  + +  L +      P ++ GT    +   V +L  + + 
Sbjct: 176 SGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTA-AQVADAVMFLAGEDAT 234
Query: 257 YVSGNIFIVDSGAT 270
           YV+G   ++D   T
Sbjct: 235 YVNGAALVMDGAYT 248

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 81
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 82  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRLGG-GATAELADELWLDVVETNLTGVF 139
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S     +  +     Y++SK G+   TK L LEL 
Sbjct: 140 RVTKQV-LKAGGMLERGTGRIVNIASTG--GKQGVVHAAPYSASKHGVVGFTKALGLELA 196
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 197 RTGITVNAVCPGFVETPM 214

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 13/256 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+    +VTG S G+G     +LA  G  +   +R    L   C    +  G  V A   
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELND-CLTQWRSKGFKVEASVC 64
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L   +    + N+V   +   G+++ LVNNAG+    K   D T E+++ IM  N   +
Sbjct: 65  DLSSRSERQELMNTVANHFH--GKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAA 121
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S      ++ A++ G+V+ ISS++      +P    Y ++K  ++ +T+CL+ E   
Sbjct: 122 YHLSVLAHPFLK-ASERGNVVFISSVSGAL--AVPYEAVYGATKGAMDQLTRCLAFEWAK 178
Query: 197 HKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
             IRVN + PG+  + + E  +    +K+ LN +  R   LR  G     L ++V +L  
Sbjct: 179 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-ALRRMGEPKE-LAAMVAFLCF 236
Query: 253 DSSEYVSGNIFIVDSG 268
            ++ YV+G I  VD G
Sbjct: 237 PAASYVTGQIIYVDGG 252

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 13/256 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+    +VTG S G+G     +LA  G  +   +R    L   C    +  G  V A   
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELND-CLTQWRSKGFKVEASVC 65
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L   +    + N+V   +   G+++ LVNNAG+    K   D T E+++ IM  N   +
Sbjct: 66  DLSSRSERQELMNTVANHFH--GKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAA 122
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S      ++ A++ G+V+ ISS++      +P    Y ++K  ++ +T+CL+ E   
Sbjct: 123 YHLSVLAHPFLK-ASERGNVVFISSVSGAL--AVPYEAVYGATKGAMDQLTRCLAFEWAK 179
Query: 197 HKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
             IRVN + PG+  + + E  +    +K+ LN +  R   LR  G     L ++V +L  
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-ALRRMGEPKE-LAAMVAFLCF 237
Query: 253 DSSEYVSGNIFIVDSG 268
            ++ YV+G I  VD G
Sbjct: 238 PAASYVTGQIIYVDGG 253

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 22/263 (8%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD K  ++TG++ G+GR F     + G R+  A   ++  ++   EI         A A
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA------ACA 55
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           + LDV+ + A+I+  V +  + +G ID LVNNA +   +   +++T E ++ +   N++G
Sbjct: 56  IALDVT-DQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSG 113
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  + + V   M    + G +IN++S  A  RG+   GV Y ++KA + ++T+   L L 
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMAS-QAGRRGEALVGV-YCATKAAVISLTQSAGLNLI 171
Query: 196 VHKIRVNSICPGLFKSEITEGLMKK--DWLNNVASRTYPLRDFGTTDPA--------LTS 245
            H I VN+I PG+   E  +G+  K  D+ N    R    R  G   P         LT 
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADYEN--LPRGEKKRQVGAAVPFGRMGRAEDLTG 229
Query: 246 LVRYLVHDSSEYVSGNIFIVDSG 268
           +  +L    ++Y+    + VD G
Sbjct: 230 MAIFLATPEADYIVAQTYNVDGG 252

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 29/254 (11%)
Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
              + K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +    G++ + +
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL----GANGKGL 56
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
              L+V+ + A+IE+ ++K    FG +D LVNNAG++      + + +EEWN I++TNL+
Sbjct: 57  M--LNVT-DPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLS 112
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             + +SK V +R     + G +I I            G   YA++KAGL   +K L+ E+
Sbjct: 113 SVFRLSKAV-MRAMMKKRHGRIITIG-----------GQANYAAAKAGLIGFSKSLAREV 160
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
               I VN + PG  ++         D    + ++    R  G  +  + + V +L  D 
Sbjct: 161 ASRGITVNVVAPGFIET-------SDDQRAGILAQVPAGRLGGAQE--IANAVAFLASDE 211
Query: 255 SEYVSGNIFIVDSG 268
           + Y++G    V+ G
Sbjct: 212 AAYITGETLHVNGG 225

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  NK V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K   S  +  +
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE-----WNHIMK 130
           V  DV+      +  +    + FG+ID LVNNAG   A+      T  +     ++  +K
Sbjct: 63  VVADVTTEDGQ-DQIINSTLKQFGKIDVLVNNAG--AAIPDAFGTTGTDQGIDIYHKTLK 119
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            NL     ++K V   +     +G ++N+SSI A  + Q P  + YA +KA L+  T+  
Sbjct: 120 LNLQAVIEMTKKVKPHL--VASKGEIVNVSSIVAGPQAQ-PDFLYYAIAKAALDQYTRST 176
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKD-----WLNNVASRT--YPLRDFGTTDPAL 243
           +++L    IRVNS+ PG+ ++  T  +   D     + N +AS     P+   G  +  +
Sbjct: 177 AIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HI 235
Query: 244 TSLVRYLV-HDSSEYVSGNIFIVDSGATL 271
            +++ +L   + S Y+ G   + D G +L
Sbjct: 236 ANIILFLADRNLSFYILGQSIVADGGTSL 264

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V+VTG SSG+G    +  A+ G  +VA       L    D ++      +R    ELD++
Sbjct: 14  VLVTGGSSGIGAAIAMQFAELGAEVVA-------LGLDADGVHAPRHPRIRRE--ELDIT 64
Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK 141
            +       +Q+ +EA  R+D LVNNAG+S   +   DL    +  +++ NL+ + L S+
Sbjct: 65  DS-----QRLQRLFEALPRLDVLVNNAGIS-RDREEYDLAT--FERVLRLNLSAAMLASQ 116
Query: 142 YVCIRMRDANQEGSVINISSIAAT-SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
               R   A + GS++NI+S+ +T      P   AY++SK  +  +T+ L+ E    +IR
Sbjct: 117 LA--RPLLAQRGGSILNIASMYSTFGSADRP---AYSASKGAIVQLTRSLACEYAAERIR 171
Query: 201 VNSICPGLFKSEITEGLMKK-DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVS 259
           VN+I PG   + +  GL    +    +  RT PL  +G   P + S   +L    + +V+
Sbjct: 172 VNAIAPGWIDTPLGAGLKADVEATRRIMQRT-PLARWGEA-PEVASAAAFLCGPGASFVT 229
Query: 260 GNIFIVDSG 268
           G +  VD G
Sbjct: 230 GAVLAVDGG 238

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 10/198 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +   + V A    
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRT 81
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV +    IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 82  CDVRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVF 139
Query: 138 LVSKYVCIRMRDANQEGS--VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V+K V ++     + G+  ++NI+S        +     Y++SK G+   TK L LEL 
Sbjct: 140 RVTKQV-LKAGGMLERGTGRIVNIASTGGKQ--GVVHAAPYSASKHGVVGFTKALGLELA 196
Query: 196 VHKIRVNSICPGLFKSEI 213
              I VN++CPG  ++ +
Sbjct: 197 RTGITVNAVCPGWVETPM 214

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 25/272 (9%)
Query: 10  DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS 69
            + P+  L  ++ +VTG S G+G+     L +AG R+   AR  +     C +   +  +
Sbjct: 20  HMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE----ACADTATRLSA 75
Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS-GAVKSPLDLTEEEWNHI 128
                A+  D+S+   A     Q   E   R+D LVNNAG S GA      ++   W  +
Sbjct: 76  YGDCQAIPADLSSEAGA-RRLAQALGELSARLDILVNNAGTSWGAALESYPVSG--WEKV 132
Query: 129 MKTNLTGSWLVSKYVCI--------RMRDANQEGSVINISSIAATS-RGQLPGGVAYASS 179
           M+ N+T     S + CI        R   A     VINI S+A  S  G+     AY  S
Sbjct: 133 MQLNVT-----SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ--AYAYGPS 185
Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT 239
           KA L+ +++ L+ EL    I VN I PG F S +T  +          S + P+  +G  
Sbjct: 186 KAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRP 245
Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +  + +L   L   +  Y++GN+  +D G  L
Sbjct: 246 E-EMAALAISLAGTAGAYMTGNVIPIDGGFHL 276

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 32/272 (11%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L+ KV +VTGA  G+GRE  ++L + GC+ IV  A   +  + +   I K++GS      
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI-KKNGSDAAC-- 83
Query: 76  VELDVSANGAAIENSVQKAWEA---FGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMK 130
               V AN   +E+ V+   EA   FG++D + +N+GV   G VK   D+T EE++ +  
Sbjct: 84  ----VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK---DVTPEEFDRVFT 136
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N  G + V++     +      G +I + SI   ++  +P    Y+ SK  +    +C+
Sbjct: 137 INTRGQFFVAREAYKHLEIG---GRLILMGSITGQAKA-VPKHAVYSGSKGAIETFARCM 192
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKK-----DWLNNVASRTY------PLRDFGTT 239
           ++++   KI VN + PG  K+++   + ++     + L+N     Y      PLR  G  
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP 252
Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
              +  +V +L  +   +V+G +  +D GA +
Sbjct: 253 ID-IARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 32/272 (11%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L+ KV +VTGA  G+GRE  ++L + GC+ IV  A   +  + +   I K++GS      
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI-KKNGSDAAC-- 83
Query: 76  VELDVSANGAAIENSVQKAWEA---FGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMK 130
               V AN   +E+ V+   EA   FG++D + +N+GV   G VK   D+T EE++ +  
Sbjct: 84  ----VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK---DVTPEEFDRVFT 136
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N  G + V++     +      G +I + SI   ++  +P    Y+ SK  +    +C+
Sbjct: 137 INTRGQFFVAREAYKHLEIG---GRLILMGSITGQAKA-VPKHAVYSGSKGAIETFARCM 192
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKK-----DWLNNVASRTY------PLRDFGTT 239
           ++++   KI VN + PG  K+++   + ++     + L+N     Y      PLR  G  
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP 252
Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
              +  +V +L  +   +V+G +  +D GA +
Sbjct: 253 ID-IARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 29/261 (11%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           L P   + ++ V+VTG + G+G       A AG ++                I  +SG  
Sbjct: 14  LVPRSHM-SRSVLVTGGNRGIGLAIARAFADAGDKVA---------------ITYRSGEP 57
Query: 71  VRA-MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
               +AV+ D++ +   +E + ++  E  G ++ L+ NAGV+   +  + ++EE++  ++
Sbjct: 58  PEGFLAVKCDIT-DTEQVEQAYKEIEETHGPVEVLIANAGVTKD-QLLMRMSEEDFTSVV 115
Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNAMT 187
           +TNLTG++ V K     M  A ++G V+ ISS+     S GQ      YA+SKAGL    
Sbjct: 116 ETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVGLLGSAGQ----ANYAASKAGLVGFA 170
Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           + L+ ELG   I  N + PG   +++T+ L  +   N V+    PL  +   +  + + V
Sbjct: 171 RSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQ--VPLGRYARPEE-IAATV 227
Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
           R+L  D + Y++G +  VD G
Sbjct: 228 RFLASDDASYITGAVIPVDGG 248

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 40/268 (14%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           + + KV +VTGA   +G    L LA+ G  I         L  +  E  +++ +SVR   
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIA--------LLDMNREALEKAEASVREKG 55
Query: 76  VEL-----DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
           VE      DV++  A I  +V      FG+ID L NNAG  GA     D   +++  ++ 
Sbjct: 56  VEARSYVCDVTSEEAVI-GTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N+TG++ V K V  +M   N  G ++N +S+A   +G  P   AY +SK  + A+T+  
Sbjct: 115 INVTGAFHVLKAVSRQMITQNY-GRIVNTASMAGV-KGP-PNMAAYGTSKGAIIALTETA 171
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLM---KKDWLNNVASRTY---------------P 232
           +L+L  + IRVN+I PG     +  G M   + +    V S+ +               P
Sbjct: 172 ALDLAPYNIRVNAISPGY----MGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP 227
Query: 233 LRDFGTTDPALTSLVRYLVHDSSEYVSG 260
           +R +G  +  +  +V +L+ D S +++G
Sbjct: 228 MRRYGDIN-EIPGVVAFLLGDDSSFMTG 254

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 32/276 (11%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
             +   K V++TG+S+G+GR   +  AK G ++    R  DRL+    +I K    + + 
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTN 132
            AV  DV+   +  ++ +      FG+ID LVNNAG + A  +   D   E +    K N
Sbjct: 81  NAVVADVT-EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN 139
Query: 133 LTGSWLVSKYVCIRMRDANQE------GSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
                       I M    +E      G ++N+SSI A  +    G   YA +KA L+  
Sbjct: 140 FQ--------AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH-SGYPYYACAKAALDQY 190
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS-RTY----------PLRD 235
           T+C +++L  H +RVNS+ PG     +  G M    L   AS + Y          P+  
Sbjct: 191 TRCTAIDLIQHGVRVNSVSPG----AVATGFMGAMGLPETASDKLYSFIGSRKECIPVGH 246
Query: 236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            G  +     +V     + S Y+ G   + D G+TL
Sbjct: 247 CGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL 282

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 27/257 (10%)
Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM--AVELDV 80
           ++TGAS G+GR   L LA+ G  +     +         E  ++ GS + A+  A  L+ 
Sbjct: 5   LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA 64
Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLTGSWL 138
            A  A     V +A E  G +D LVNNAG++   +  L   + +E+W  +++ NL+  + 
Sbjct: 65  EAATAL----VHQAAEVLGGLDTLVNNAGIT---RDTLLVRMKDEDWEAVLEANLSAVFR 117
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLELGV 196
            ++     M  A + G ++NI+S+     G L  PG   Y +SKAGL   T+ ++ E   
Sbjct: 118 TTREAVKLMMKA-RFGRIVNITSVV----GILGNPGQANYVASKAGLIGFTRAVAKEYAQ 172
Query: 197 HKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
             I VN++ PG  ++E+TE L   +K+ +L  +     P   FG  +  +   V +LV +
Sbjct: 173 RGITVNAVAPGFIETEMTERLPQEVKEAYLKQI-----PAGRFGRPEE-VAEAVAFLVSE 226
Query: 254 SSEYVSGNIFIVDSGAT 270
            + Y++G    VD G T
Sbjct: 227 KAGYITGQTLCVDGGLT 243

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 24/259 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K  +VTGA+ G+G+     LA  G  ++ +    +  K+    I K++    RA+A
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA----RAIA 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            ++    +  A+   +Q      G ID LVNNA +   V    D+  + W  I+  NLTG
Sbjct: 59  ADISDPGSVKALFAEIQ---ALTGGIDILVNNASIVPFVAWD-DVDLDHWRKIIDVNLTG 114
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +++V++    +MR A + G VI+I+S   T     P   AY ++K G+   T+ L+ ELG
Sbjct: 115 TFIVTRAGTDQMRAAGKAGRVISIAS--NTFFAGTPNMAAYVAAKGGVIGFTRALATELG 172
Query: 196 VHKIRVNSICPGLFKSE------ITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
            + I  N++ PGL +S+        E     + L  +  +  P          +  +V +
Sbjct: 173 KYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEH--------IADVVSF 224
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  D + +++G    VD+G
Sbjct: 225 LASDDARWITGQTLNVDAG 243

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 10/223 (4%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKQSGSSVR 72
           +L  K V++TGAS+G+G+   L+  +A     +++ AARR+++L+ L   I+ Q   + +
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTID-QEFPNAK 88
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
               +LD++     I+  ++   + F  ID LVNNAG +        +  E+   +  TN
Sbjct: 89  VHVAQLDIT-QAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTN 147
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           +T    +++ V + +  A   G ++N+ SIA   R   P G  Y +SK  + A T  L  
Sbjct: 148 VTALINITQAV-LPIFQAKNSGDIVNLGSIAG--RDAYPTGSIYCASKFAVGAFTDSLRK 204
Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPL 233
           EL   KIRV  I PGL ++E +    +  ++   NV   T PL
Sbjct: 205 ELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL 247

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Query: 13  PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVR 72
           P   L +KVV++TGA +GLG+E+    AK G ++V     V+  K     +++   +   
Sbjct: 316 PTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVV-----VNDFKDATKTVDEIKAAGGE 370
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A   + DV+ +  AI   ++   + +G ID LVNNAG+    +S   ++++EW+ + + +
Sbjct: 371 AWPDQHDVAKDSEAI---IKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWDSVQQVH 426
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L G++ +S+       +  Q G +INI+S +    G   G   Y+SSKAG+  ++K +++
Sbjct: 427 LIGTFNLSRLAWPYFVE-KQFGRIINITSTSGI-YGNF-GQANYSSSKAGILGLSKTMAI 483
Query: 193 ELGVHKIRVNSICP 206
           E   + I+VN + P
Sbjct: 484 EGAKNNIKVNIVAP 497

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 40/266 (15%)
Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
               +KVV++TGA  GLG+ + L+ AK G ++V        +  L   +N Q G+S  A 
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVV--------VNDLGGALNGQGGNSKAAD 55
Query: 75  AVELDVSANGAAI----------ENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTE 122
            V  ++  NG             +  V+ A + FG +  ++NNAG+    ++K    +TE
Sbjct: 56  VVVDEIVKNGGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKK---MTE 112
Query: 123 EEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAG 182
           +++  ++  +L G++ V+K      +   + G ++N SS A    G   G   YAS+K+ 
Sbjct: 113 KDYKLVIDVHLNGAFAVTKAAWPYFQ-KQKYGRIVNTSSPAGL-YGNF-GQANYASAKSA 169
Query: 183 LNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA 242
           L    + L+ E   + I+ N+I P L +S +TE +M    L  +                
Sbjct: 170 LLGFAETLAKEGAKYNIKANAIAP-LARSRMTESIMPPPMLEKLGPEK------------ 216
Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSG 268
           +  LV YL    +E ++G  F V +G
Sbjct: 217 VAPLVLYLSSAENE-LTGQFFEVAAG 241

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 22/260 (8%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           NK  +VTG+S G+G+   + LA+ G  IV   AR         +EI K     V+ + V+
Sbjct: 4   NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL---GVKVLVVK 60
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            +V    A I+   Q+  E FGR+D  VNNA  SG ++  ++L E  W+  M  N   + 
Sbjct: 61  ANV-GQPAKIKEMFQQIDETFGRLDVFVNNAA-SGVLRPVMELEETHWDWTMNIN-AKAL 117
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L       ++ + N  G +++ISS+ +     L        SKA L A+T+ L++EL   
Sbjct: 118 LFCAQEAAKLMEKNGGGHIVSISSLGSIR--YLENYTTVGVSKAALEALTRYLAVELSPK 175
Query: 198 KIRVNSICPGLFKSEI------TEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           +I VN++  G   ++        E L++    N  A R   ++D   T       V +LV
Sbjct: 176 QIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDT-------VEFLV 228
Query: 252 HDSSEYVSGNIFIVDSGATL 271
              ++ + G   IVD G +L
Sbjct: 229 SSKADMIRGQTIIVDGGRSL 248

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 40/278 (14%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI---------NKQS 67
           L  KV  +TGA+ G GR   + LA  G  I+A    VD    LCD+I          ++ 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIA----VD----LCDQIASVPYPLATPEEL 62
Query: 68  GSSV--------RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD 119
            ++V        R +A + DV  +  ++  ++Q   +  GR+D +V NAG++     P+ 
Sbjct: 63  AATVKLVEDIGSRIVARQADVR-DRESLSAALQAGLDELGRLDIVVANAGIA-----PMS 116
Query: 120 LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYA 177
             ++ W+ ++  NLTG +   K     +      GS++ ISS A  A      PG V Y 
Sbjct: 117 AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYV 176
Query: 178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG 237
           ++K G+  + +  +  L    IRVNSI P   ++ +      ++WL  +A+ T      G
Sbjct: 177 AAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMG 236
Query: 238 TTDPA-------LTSLVRYLVHDSSEYVSGNIFIVDSG 268
              P        + + V +LV D + Y++G    VD+G
Sbjct: 237 NAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG 274

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD KV ++TG + G+G        + G +++   R  D    + ++  K  G+  +   
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD----VGEKAAKSVGTPDQIQF 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            + D S++            +AFG +  LVNNAG++   KS  + T  EW  ++  NL G
Sbjct: 59  FQHD-SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDG 116
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE-- 193
            +  ++    RM++     S+IN+SSI        P   AY +SK  +  M+K  +L+  
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD--PSLGAYNASKGAVRIMSKSAALDCA 174
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           L  + +RVN++ PG  K+ + + L   +   +  ++T P+   G  +  +  +  YL  +
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPND-IAYICVYLASN 232
Query: 254 SSEYVSGNIFIVDSGAT 270
            S++ +G+ F+VD G T
Sbjct: 233 ESKFATGSEFVVDGGYT 249

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 18/261 (6%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA------AARRVDRLKSLCDEINKQSGS 69
           +L + + +VTGA SG+GR   + LA  G  + A      AA+   RL  L    +K+   
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRL--LGGPGSKEGPP 61
Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNN-AGVSGAVKSPLDLTEEEWNHI 128
                A + DVS   AA    +++    F R  ++V + AG++   +  L ++E++W+ +
Sbjct: 62  RGNHAAFQADVSEARAA-RCLLEQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKV 119
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           +  NL G++LV++     +      GS+INISSI     G + G   YA+SKAG+  +T+
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-GNV-GQTNYAASKAGVIGLTQ 177
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLV 247
             + ELG H IR NS+ PG   + +T+ + +K  + +  +   P+   G  DP  +  +V
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQKVPQK--VVDKITEMIPMGHLG--DPEDVADVV 233
Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L  + S Y++G    V  G
Sbjct: 234 AFLASEDSGYITGTSVEVTGG 254

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%), Gaps = 7/256 (2%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD K  ++TGA+ G+G +     A AG R+V + R V  L +    + +Q G+ V  +A
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           ++L   A   A     ++A EAFG +D LVNNAG+S   +  +D   + ++  +  NL  
Sbjct: 77  IDL---AEPDAPAELARRAAEAFGGLDVLVNNAGISHP-QPVVDTDPQLFDATIAVNLRA 132
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
             L++  V   M  A + G++I ++S AA +        AY +SKAGL   TK L+ ELG
Sbjct: 133 PALLASAVGKAMVAAGEGGAIITVASAAALAPLP--DHYAYCTSKAGLVMATKVLARELG 190
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            H IR NS+CP +  +E+ + +   +  +       PL  F      ++  V +L  D++
Sbjct: 191 PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPH-EVSDAVVWLASDAA 249
Query: 256 EYVSGNIFIVDSGATL 271
             ++G    VD G T+
Sbjct: 250 SMINGVDIPVDGGYTM 265

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 14/187 (7%)
Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V++TGAS G+G      L   G R+   AR   RL++L  E+         A+ +  DV 
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-------ALPLPGDVR 60
Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL-VS 140
             G     +V    EAFG + ALVNNAGV G +K   +LT EEW  ++ TNLTG++L + 
Sbjct: 61  EEGD-WARAVAAMEEAFGELSALVNNAGV-GVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118
Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
             V   +R     G+++N+ S+A   +    GG AY +SK GL  +     L+L    +R
Sbjct: 119 HAVPALLRRGG--GTIVNVGSLA--GKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVR 174
Query: 201 VNSICPG 207
           V ++ PG
Sbjct: 175 VVNVLPG 181

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAA---------ARRVDRLKSLCDEINKQSGSS 70
           KV  ++GA+ G GR   + LA+ G  I+A          A      + L +  +      
Sbjct: 16  KVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDLD 75
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            R +  ++DV  +  A++++V    E  GR+D +V NAGV    +    + +  W  ++ 
Sbjct: 76  RRIVTAQVDVR-DFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMID 134
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            NLTG W   K     +    + GS++  SS+    R   P    Y ++K G+  + +  
Sbjct: 135 INLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGG--RKAYPNTGHYIAAKHGVIGLMRAF 192
Query: 191 SLELGVHKIRVNSICP-----GLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA--- 242
           ++ELG H IRVN++ P      +  ++ T  L + D  N       P+     T P    
Sbjct: 193 AVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPWV 252
Query: 243 ----LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
               +++ V +L  D S YV+G    VD+G+ L
Sbjct: 253 DASDISNAVLFLASDESRYVTGVSLPVDAGSLL 285

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD KV ++TG + G+G        + G +++      DR   + ++  K  G+  +   
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMI----TDRHSDVGEKAAKSVGTPDQIQF 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            + D S++            +AFG +  LVNNAG++   KS  + T  EW  ++  NL G
Sbjct: 59  FQHD-SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDG 116
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE-- 193
            +  ++    RM++     S+IN+SSI        P   AY +SK  +  M+K  +L+  
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD--PSLGAYNASKGAVRIMSKSAALDCA 174
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
           L  + +RVN++ PG  K+ + + L   +   +  ++T P+   G  +  +  +  YL  +
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPND-IAYICVYLASN 232
Query: 254 SSEYVSGNIFIVDSGAT 270
            S++ +G+ F+VD G T
Sbjct: 233 ESKFATGSEFVVDGGYT 249

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 26/277 (9%)
Query: 15  CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR---------RVDRLKSLCDEINK 65
              + K  ++TG + G+GR   + LA+AG  I    R          +     L + +  
Sbjct: 6   ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL 65
Query: 66  QSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW 125
              +  R ++ ++DV  + AA+E+ V +A +  G ID  + NAG+S     P ++   +W
Sbjct: 66  VEKTGRRCISAKVDVK-DRAALESFVAEAEDTLGGIDIAITNAGISTIALLP-EVESAQW 123
Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
           + ++ TNLTG++     V   M   N  G ++ +SS+   S        +Y SSK G+  
Sbjct: 124 DEVIGTNLTGTFNTIAAVAPGMIKRNY-GRIVTVSSMLGHSANF--AQASYVSSKWGVIG 180
Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITE-----GLMKKDW----LNNVAS--RTYPLR 234
           +TKC + +L  + I VN++ PG  ++ +T      G M+ D     L +V S   +  L+
Sbjct: 181 LTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ 240
Query: 235 DFGTTDP-ALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
                 P  +T  V +LV ++S +++G +  +D+GAT
Sbjct: 241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 18/253 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTGA  G+GR     L   G R+VA +R    L SL  E        +  + V
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCV 59
Query: 77  EL-DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +L D  A         ++A  + G +D LVNNA V+  ++  L++T+E ++   + NL  
Sbjct: 60  DLGDWEAT--------ERALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRA 110
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              VS+ V   +      G+++N+SS    S+  +     Y S+K  L+ +TK ++LELG
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSS--QXSQRAVTNHSVYCSTKGALDMLTKVMALELG 168
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            HKIRVN++ P +  + + +                PL  F   +  + +++ +L+ D S
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL-FLLSDRS 227
Query: 256 EYVSGNIFIVDSG 268
              +G+   V+ G
Sbjct: 228 GMTTGSTLPVEGG 240

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 18/253 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTGA  G+GR     L   G R+VA +R    L SL  E        +  + V
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCV 59
Query: 77  EL-DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +L D  A         ++A  + G +D LVNNA V+  ++  L++T+E ++   + NL  
Sbjct: 60  DLGDWEAT--------ERALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRA 110
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              VS+ V   +      G+++N+SS    S+  +     Y S+K  L+ +TK ++LELG
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSS--QCSQRAVTNHSVYCSTKGALDMLTKVMALELG 168
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
            HKIRVN++ P +  + + +                PL  F   +  + +++ +L+ D S
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL-FLLSDRS 227
Query: 256 EYVSGNIFIVDSG 268
              +G+   V+ G
Sbjct: 228 GMTTGSTLPVEGG 240

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 6   SDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK 65
           ++ L  +   +   K+ +VTGA SG+GR   + LA AG  +  A RR+D L+    EI  
Sbjct: 15  TENLYFQSXSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD 74
Query: 66  QSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW 125
                  A+ V  DV+ +  ++        E FGR+D L NNAG         DLT  +W
Sbjct: 75  D------ALCVPTDVT-DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQW 127
Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQE--GSVINISSIAATSRGQLPGGVAYASSKAGL 183
             ++ TNLTG +L ++    R+  A +   G +IN  SI+ATS    P    Y ++K  +
Sbjct: 128 KQVVDTNLTGPFLCTQE-AFRVXKAQEPRGGRIINNGSISATS--PRPYSAPYTATKHAI 184
Query: 184 NAMTKCLSLELGVHKIRVNSI 204
             +TK  SL+  VH I    I
Sbjct: 185 TGLTKSTSLDGRVHDIACGQI 205

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 9/258 (3%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V+VTG + G+G     + A  G  I   AR    L     +  K+ G  V     
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVC 70
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +  +      +  +V   +   G++D L+NN G   + K  LD T E+++  + TNL  +
Sbjct: 71  DASLRPEREKLMQTVSSMFG--GKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLESA 127
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S+     ++ A+  G++I +SSIA      +  G  Y+++K  LN + + L+ E   
Sbjct: 128 YHLSQLAHPLLK-ASGCGNIIFMSSIAGVVSASV--GSIYSATKGALNQLARNLACEWAS 184
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             IR N++ P +  + + E +   ++   V SR  PL  FG  +  ++SLV +L   ++ 
Sbjct: 185 DGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK-PLGRFGEPEE-VSSLVAFLCMPAAS 242
Query: 257 YVSGNIFIVDSGATLPGL 274
           Y++G    VD G T+ G 
Sbjct: 243 YITGQTICVDGGLTVNGF 260

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 19/258 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTGA +G+G      LA  GC ++ A    D   +   +I         A A 
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG------CGAAAC 80
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +DVS +   I   V     AFG +D LV NAGV   + S +D T E+++ ++  NL G+
Sbjct: 81  RVDVS-DEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGA 138
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP-GGV-AYASSKAGLNAMTKCLSLEL 194
           WL +K+   RM +    G+++N+SS+A    GQ+  GG  AY  SKAG+  +++  + EL
Sbjct: 139 WLCTKHAAPRMIE-RGGGAIVNLSSLA----GQVAVGGTGAYGMSKAGIIQLSRITAAEL 193
Query: 195 GVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFG--TTDPALTSLVRYL 250
               IR N++ P    + + +  M      L    +R+   R  G       +  +V +L
Sbjct: 194 RSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFL 253
Query: 251 VHDSSEYVSGNIFIVDSG 268
           + D +  ++G   I D G
Sbjct: 254 LSDDASMITGTTQIADGG 271

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLKS-----------LCD 61
           +L+ +V  +TGA+ G GR   + +A  G  I+A    VD   +L S           L +
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIA----VDIAGKLPSCVPYDPASPDDLSE 63
Query: 62  EINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLT 121
            +     ++ R +A  +D + +   +   V     A GR+D +V NAGV+ A ++  D+T
Sbjct: 64  TVRLVEAANRRIVAAVVD-TRDFDRLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDIT 121
Query: 122 EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKA 181
            E++  +M  N+TG+W        R+ +  + GS+I ISS A       P  + Y +SK 
Sbjct: 122 PEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK--MQPFMIHYTASKH 179
Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRTYP 232
            +  + +  + ELG H IRVNS+ PG   + +  G M             L++V +   P
Sbjct: 180 AVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP 239
Query: 233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
             D+      +   V +L  D S  V+     VD G+T
Sbjct: 240 --DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 24/259 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K  +VTGA+ G+G+     LA  G  ++ +    +  K+    I K++    RA+A
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA----RAIA 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            ++    +  A+   +Q      G ID LVNNA +   V    D+  + W  I+  NLTG
Sbjct: 59  ADISDPGSVKALFAEIQ---ALTGGIDILVNNASIVPFVAWD-DVDLDHWRKIIDVNLTG 114
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +++V++    + R A + G VI+I+S   T     P   AY ++K G+   T+ L+ ELG
Sbjct: 115 TFIVTRAGTDQXRAAGKAGRVISIAS--NTFFAGTPNXAAYVAAKGGVIGFTRALATELG 172
Query: 196 VHKIRVNSICPGLFKSE------ITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
            + I  N++ PGL +S+        E     + L     +  P          +  +V +
Sbjct: 173 KYNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGKGQPEH--------IADVVSF 224
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  D + +++G    VD+G
Sbjct: 225 LASDDARWITGQTLNVDAG 243

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGAS G+G E    LA  G  +V  A      +   +   K+ G   R + +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF-ENSXKEKGFKARGLVL 61
Query: 77  EL-DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNL 133
            + D+ +    I+N   +       ID LVNNAG++   +  L    +E+EW  ++ TNL
Sbjct: 62  NISDIES----IQNFFAEIKAENLAIDILVNNAGIT---RDNLXXRXSEDEWQSVINTNL 114
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           +  +  SK  C+R     + G +I+I S+  ++    PG   Y ++KAG+   +K L+ E
Sbjct: 115 SSIFRXSKE-CVRGXXKKRWGRIISIGSVVGSAGN--PGQTNYCAAKAGVIGFSKSLAYE 171
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVH 252
           +    I VN + PG   ++ T+ L   D   +  +   P    G  +P  + + V +L  
Sbjct: 172 VASRNITVNVVAPGFIATDXTDKLT--DEQKSFIATKIPSGQIG--EPKDIAAAVAFLAS 227
Query: 253 DSSEYVSGNIFIVDSG 268
           + ++Y++G    V+ G
Sbjct: 228 EEAKYITGQTLHVNGG 243

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 33/269 (12%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +D +VV+VTGA  G+GR   L  A  G R+V     V+ +    D      GS+ +++  
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVV-----VNDIGVGLDGSPASGGSAAQSVVD 79
Query: 77  ELDVSANGAAIENS-----------VQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEE 123
           E+  +   A  + S           +Q A E FG +D LVNNAG+   V+  +  + +EE
Sbjct: 80  EITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI---VRDRMIANTSEE 136
Query: 124 EWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA---YASSK 180
           E++ ++  +L G +   ++     R  ++ G  ++   I  +S   L G V    Y+++K
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAK 196
Query: 181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTD 240
           AG+  +T   + E+G + + VN+I P   ++ +TE +  +     +A++    +DF    
Sbjct: 197 AGIATLTLVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAE----MMATQD---QDFDAMA 248
Query: 241 PA-LTSLVRYLVHDSSEYVSGNIFIVDSG 268
           P  ++ LV +L    +  V+G +F V+ G
Sbjct: 249 PENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 25/260 (9%)
Query: 17  LDNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KVV+VT A+ +G+G          G  +V +     RL    D++       V A+ 
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 76  VEL-DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNL 133
            ++    A  A I  +V+KA    GR+D LVNNAG+ G  ++P+ D+T+EEW+ ++   L
Sbjct: 80  CDVTSTEAVDALITQTVEKA----GRLDVLVNNAGLGG--QTPVVDMTDEEWDRVLNVTL 133
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYASSKAGLNAMTKC 189
           T     ++      R  +  G ++N +S+    A  S+        YA++KAG+ A+T+C
Sbjct: 134 TSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSH------YAAAKAGVMALTRC 187
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG-TTDP-ALTSLV 247
            ++E     +R+N++ P + + +  E     + L+ +AS       FG   +P  + + +
Sbjct: 188 SAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASD----EAFGRAAEPWEVAATI 243
Query: 248 RYLVHDSSEYVSGNIFIVDS 267
            +L  D S Y++G +  V S
Sbjct: 244 AFLASDYSSYMTGEVVSVSS 263

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTGAS G+GR     LA  G  + +    R +  +    EI    GS+  ++ 
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIG 63
Query: 76  VELD----VSANGAAIENSVQKAWEAFGRIDALVNNAGVS-GAVKSPLDLTEEEWNHIMK 130
             L+    V A  ++++N +Q    +  + D L+NNAG+  GA     + TE+ ++  + 
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGS-TKFDILINNAGIGPGAFIE--ETTEQFFDRXVS 120
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N    + + +    R+RD ++   +INISS  A +R  LP  +AY+ +K  +N  T  L
Sbjct: 121 VNAKAPFFIIQQALSRLRDNSR---IINISS--AATRISLPDFIAYSXTKGAINTXTFTL 175
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           + +LG   I VN+I PG  K++    L+        A+        G  +  +     +L
Sbjct: 176 AKQLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVED-IADTAAFL 234
Query: 251 VHDSSEYVSGNIFIVDSGATL 271
               S +V+G +  V  G+ L
Sbjct: 235 ASPDSRWVTGQLIDVSGGSCL 255

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 37/252 (14%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV-----------AAARRVDRLKSLCDEIN 64
           + D +V +VTGA +GLGRE+ L  A+ G ++V            A++R   +  + DEI 
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI--VVDEIR 73
Query: 65  KQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE 124
           K  G +V     + +   +GA +   ++ A +AFGR+D LVNNAG+    +S +  +E++
Sbjct: 74  KAGGEAV----ADYNSVIDGAKV---IETAIKAFGRVDILVNNAGILRD-RSLVKTSEQD 125
Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLN 184
           WN +   +L GS+  ++     M+  N  G +I  SS +    G   G V Y ++K GL 
Sbjct: 126 WNLVNDVHLKGSFKCTQAAFPYMKKQNY-GRIIMTSSNSGI-YGNF-GQVNYTAAKMGLI 182
Query: 185 AMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALT 244
            +   +++E   + +  N I P    S +TEG++     N +  +             + 
Sbjct: 183 GLANTVAIEGARNNVLCNVIVP-TAASRMTEGILPDILFNELKPKL------------IA 229
Query: 245 SLVRYLVHDSSE 256
            +V YL H+S E
Sbjct: 230 PVVAYLCHESCE 241

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 125/259 (48%), Gaps = 22/259 (8%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQ-SGSSVRAMAVE 77
           +KVV++TG S G+G    L  A+ G    A A       +  DE+ +Q   +  +A+AV+
Sbjct: 25  SKVVLITGGSRGIGAASALLAARQGY---AVAVNYASNSAAADEVVRQIREAGGQALAVQ 81
Query: 78  LDVSANGAAIENSVQKAWEA----FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
            DV     A E  V   +E      GR+ ALVNNAGV         +T E      + N+
Sbjct: 82  ADV-----AKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINV 136
Query: 134 TGSWLVSKYVCIR--MRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNAMTKC 189
            GS+L ++    R   R     GS++N+SS AA   S GQ    V YA++K  ++  T  
Sbjct: 137 FGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQY---VDYAAAKGAIDTFTLG 193
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           L+ E+    IRVN++ PG+ +++I       +   +VA +  P +  GT      ++V +
Sbjct: 194 LAKEVATEGIRVNAVRPGIIETDIHASGGLPNRARDVAPQV-PXQRAGTAREVAEAIV-W 251
Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L+ D + Y +G +  V  G
Sbjct: 252 LLGDQASYTTGALLDVTGG 270

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            +  +VTG S G+GR     L   G R+  A+R  +           ++  S+ A+ +  
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE-----------EAAQSLGAVPLPT 50
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSW 137
           D+  +    +  V++A EA G +  LV+ A V+  V+ P L+L+ EEW  ++  +L  ++
Sbjct: 51  DLEKDDP--KGLVKRALEALGGLHVLVHAAAVN--VRKPALELSYEEWRRVLYLHLDVAF 106
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L+++     M +A   G V+ I S+   + G      AY ++K  L  +T+ L+ E    
Sbjct: 107 LLAQAAAPHMAEAGW-GRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARL 165
Query: 198 KIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY 257
            IRVN +CPG  ++E T  L +   L    +   P+  +   +  +  +   L  D +EY
Sbjct: 166 GIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPE-EIARVAAVLCGDEAEY 224
Query: 258 VSGNIFIVDSG 268
           ++G    VD G
Sbjct: 225 LTGQAVAVDGG 235

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 25/257 (9%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           NKV +VTGAS G+G      LA  G  +V   A +    + +  +I    G   +A+  +
Sbjct: 27  NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG---KALTAQ 83
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE----WNHIMKTNL 133
            DVS + AA+      A EAFG +D LVNNAG+      PL    E     ++ ++  NL
Sbjct: 84  ADVS-DPAAVRRLFATAEEAFGGVDVLVNNAGIX-----PLTTIAETGDAVFDRVIAVNL 137
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL-PGGVAYASSKAGLNAMTKCLSL 192
            G++   +    R+R     G +IN S+   +  G L P    YA++KAG+ A T  LS 
Sbjct: 138 KGTFNTLREAAQRLRVG---GRIINXST---SQVGLLHPSYGIYAAAKAGVEAXTHVLSK 191
Query: 193 ELGVHKIRVNSICPGLFKSEI-TEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           EL    I VN++ PG   +++  EG  K D + +  ++  PL   GT    +   V +L 
Sbjct: 192 ELRGRDITVNAVAPGPTATDLFLEG--KSDEVRDRFAKLAPLERLGTPQD-IAGAVAFLA 248
Query: 252 HDSSEYVSGNIFIVDSG 268
                +V+G +   + G
Sbjct: 249 GPDGAWVNGQVLRANGG 265

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 12/264 (4%)
Query: 9   LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG 68
           +D     +LD     VTGA SG+G E C   A +G R++     +DR  +  D   ++ G
Sbjct: 1   MDYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLIL----IDREAAALDRAAQELG 56
Query: 69  SSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
           ++V A  V  DV+   A    + +   EA   +  LVN+AG++  +   L+  +  W  +
Sbjct: 57  AAVAARIVA-DVTDAEAMTAAAAEA--EAVAPVSILVNSAGIA-RLHDALETDDATWRQV 112
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           M  N+ G +  S+    R   A   G+++N+ S++ T   +     +Y +SK  ++ +T+
Sbjct: 113 MAVNVDGMFWASRAFG-RAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTR 171
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLV 247
            L+ E     +RVN++ PG   +E+T  + ++  L        P+   G  +P+ + +  
Sbjct: 172 ALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCG--EPSEIAAAA 229
Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            +L   ++ YV+G I  VD G T+
Sbjct: 230 LFLASPAASYVTGAILAVDGGYTV 253

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 16/253 (6%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           ++ V+VTGAS G+GR     LA  G  I V   R     +   + I    G+  R ++ +
Sbjct: 26  SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNG-RLLSFD 84
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
           +   AN       ++      G    +V+NAG++     P  L+ ++W+ ++ TNL   +
Sbjct: 85  V---ANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPA-LSNDDWDAVIHTNLDSFY 140
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            V +   + M  A Q G +I +SS++    +RGQ    V Y+++KAG+   TK L++EL 
Sbjct: 141 NVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ----VNYSAAKAGIIGATKALAIELA 196
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
             KI VN I PGL  + + E  M++  L    S   P++  G  +  +  L  YL+ D +
Sbjct: 197 KRKITVNCIAPGLIDTGMIE--MEESALKEAMS-MIPMKRMGQAEE-VAGLASYLMSDIA 252
Query: 256 EYVSGNIFIVDSG 268
            YV+  +  ++ G
Sbjct: 253 GYVTRQVISINGG 265

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 20/259 (7%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  +  +VTGA+ G+G          G  +     R D+LK    EI    G  V   +
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK----EIAADLGKDVFVFS 79
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNL 133
             L   ++  +I+   + A      ID LVNNAG++   +  L   + +++W+ ++  NL
Sbjct: 80  ANL---SDRKSIKQLAEVAEREMEGIDILVNNAGIT---RDGLFVRMQDQDWDDVLAVNL 133
Query: 134 TG-SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           T  S L  + +   MR   + G +INI+SI        PG   Y ++KAGL   +K L+ 
Sbjct: 134 TAASTLTRELIHSMMR--RRYGRIINITSIVGVVGN--PGQTNYCAAKAGLIGFSKALAQ 189
Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           E+    I VN I PG  KS +T+ L +K     +A    P++  G  +    + V YL  
Sbjct: 190 EIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMA--MIPMKRMGIGEEIAFATV-YLAS 246
Query: 253 DSSEYVSGNIFIVDSGATL 271
           D + Y++G    ++ G  +
Sbjct: 247 DEAAYLTGQTLHINGGMAM 265

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSV--RAMAVELDV 80
           ++T  + GLG++    L   G  +           +   E  K++   V  R   V+ DV
Sbjct: 11  LITAGTKGLGKQVTEKLLAKGYSVTVTYHS----DTTAMETMKETYKDVEERLQFVQADV 66
Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWLV 139
           +     +   V++A   FG+ID L+NNAG     +  L D  E+EWN +++ NLT  + +
Sbjct: 67  TKK-EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHL 125
Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV---AYASSKAGLNAMTKCLSLELGV 196
            K V   MR  N  G +IN     A S    PG +   A+A++K GL ++TK ++ E   
Sbjct: 126 LKLVVPVMRKQNF-GRIINYGFQGADS---APGWIYRSAFAAAKVGLVSLTKTVAYEEAE 181
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           + I  N +CPG    E+ E  +++     +     P+   GT +  +   + +L  D S+
Sbjct: 182 YGITANMVCPGDIIGEMKEATIQE--ARQLKEHNTPIGRSGTGED-IARTISFLCEDDSD 238
Query: 257 YVSGNIFIV 265
            ++G I  V
Sbjct: 239 MITGTIIEV 247

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTGASSG GR        AG  ++  ARR + L  L       +    RA A+ LD
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV------AAYPDRAEAISLD 59
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           V+ +G  I+         +GR+D LVNNAG +  V +  + TE E   + + ++ G   +
Sbjct: 60  VT-DGERIDVVAADVLARYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARL 117
Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLELGVH 197
           ++ +  + R+    GSV+NISS      GQL   G  AY+++KA L  +++ L+ E+   
Sbjct: 118 TRALLPQXRERGS-GSVVNISSFG----GQLSFAGFSAYSATKAALEQLSEGLADEVAPF 172
Query: 198 KIRVNSICPGLFKSEI 213
            I+V  + PG F++ +
Sbjct: 173 GIKVLIVEPGAFRTNL 188

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +  G   +A A
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFA 64
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              D+++    +      A    G++D LVNNAG  G    P D+   ++    + N+  
Sbjct: 65  CRCDITSE-QELSALADFAISKLGKVDILVNNAG--GGGPKPFDMPMADFRRAYELNVFS 121
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + +S+ V   M + N  G ++ I+S+AA ++       +YASSKA  + + + ++ +LG
Sbjct: 122 FFHLSQLVAPEM-EKNGGGVILTITSMAAENKN--INMTSYASSKAAASHLVRNMAFDLG 178
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN I PG   ++  + ++  +    +   T P+R  G     + +   +L   ++
Sbjct: 179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT-PIRRLGQPQD-IANAALFLCSPAA 236
Query: 256 EYVSGNIFIVDSG 268
            +VSG I  V  G
Sbjct: 237 SWVSGQILTVSGG 249

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 40/272 (14%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L +KVV+VTGAS G+GR         G +++              +++       + 
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVI--------------DLSIHDPGEAKY 48
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKT 131
             +E DV+ N   ++ S+   ++ +G I  LVNNAG+   G ++S   ++  EW  I+  
Sbjct: 49  DHIECDVT-NPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIES---MSMGEWRRIIDV 104
Query: 132 NLTGSWLVSKYVC---IRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           NL G +  SK+     IR RD     S++NISS+ A+   +     AY +SK  +  +TK
Sbjct: 105 NLFGYYYASKFAIPYMIRSRDP----SIVNISSVQASIITK--NASAYVTSKHAVIGLTK 158
Query: 189 CLSLELGVHKIRVNSICPGLFKS---------EITEGLMKKDWLNNVASRTYPLRDFGTT 239
            ++L+     +R N++CP    +         E+    M+ +   +     +P++  G  
Sbjct: 159 SIALDYA-PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKP 217
Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
              + S V +L    + +++G    VD G ++
Sbjct: 218 Q-EVASAVAFLASREASFITGTCLYVDGGLSI 248

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 27/240 (11%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           ++ KV +VTGA+ G+GR F   L   G ++      ++     C     +     + + +
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA-GVQCKAALHEQFEPQKTLFI 63
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL--- 133
           + DV A+   + ++ +K  + FGR+D LVNNAGV+          E+ W   ++ NL   
Sbjct: 64  QCDV-ADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSV 113
Query: 134 -TGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKAGLNAMTK--C 189
            +G++L   Y  +  ++  + G +IN+SS+A      Q P    Y +SK G+   T+   
Sbjct: 114 ISGTYLGLDY--MSKQNGGEGGIIINMSSLAGLMPVAQQP---VYCASKHGIVGFTRSAA 168
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRD----FGTTDPALTS 245
           L+  L    +R+N+ICPG   + I E + K++ +         ++D    +G  DP L +
Sbjct: 169 LAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA 228

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 40/272 (14%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L +KVV+VTGAS G+GR         G +++              +++       + 
Sbjct: 10  FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVI--------------DLSIHDPGEAKY 55
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKT 131
             +E DV+ N   ++ S+   ++ +G I  LVNNAG+   G ++S   ++  EW  I+  
Sbjct: 56  DHIECDVT-NPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIES---MSMGEWRRIIDV 111
Query: 132 NLTGSWLVSKYVC---IRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           NL G +  SK+     IR RD     S++NISS+ A+   +     AY +SK  +  +TK
Sbjct: 112 NLFGYYYASKFAIPYMIRSRDP----SIVNISSVQASIITK--NASAYVTSKHAVIGLTK 165
Query: 189 CLSLELGVHKIRVNSICPGLFKS---------EITEGLMKKDWLNNVASRTYPLRDFGTT 239
            ++L+     +R N++CP    +         E+    M+ +   +     +P++  G  
Sbjct: 166 SIALDYA-PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKP 224
Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
              + S V +L    + +++G    VD G ++
Sbjct: 225 Q-EVASAVAFLASREASFITGTCLYVDGGLSI 255

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 12/255 (4%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           NK ++VTG + G+G  F   +A AG  +    R       + +++ K+ G  V+  A + 
Sbjct: 14  NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQC 71
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DVS N   +  ++Q+     G I  L+ NAGVS  VK   +LT E++  +   N+ G + 
Sbjct: 72  DVS-NTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFN 129
Query: 139 VSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGG---VAYASSKAGLNAMTKCLSLE 193
             + V        Q+GS++  SS+++   ++  L G    V Y SSKA  + + K L+ E
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                IRVN++ PG   ++ T  + KK  + +  +   PL  F   +  +T     L+ D
Sbjct: 190 WASAGIRVNALSPGYVNTDQTAHMDKK--IRDHQASNIPLNRFAQPEE-MTGQAILLLSD 246
Query: 254 SSEYVSGNIFIVDSG 268
            + Y++G  + +D G
Sbjct: 247 HATYMTGGEYFIDGG 261

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 121/250 (48%), Gaps = 15/250 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV ++TGASSG+G      LA  G  +  AARRV++L++L DE+   +G+ V  +  
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-AGAKVHVL-- 61
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
           ELDV A+   ++ +V    EA G +D LVNNAG+   G V+   D    +W  ++ TNL 
Sbjct: 62  ELDV-ADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVE---DADTTDWTRMIDTNLL 117
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G   +++     +     +G+V+ +SSIA   R  +     Y ++K G+NA ++ L  E+
Sbjct: 118 GLMYMTRAALPHL--LRSKGTVVQMSSIAG--RVNVRNAAVYQATKFGVNAFSETLRQEV 173
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
               +RV  I PG   +E+   +           R   +R     D A    VRY V   
Sbjct: 174 TERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIA--EAVRYAVTAP 231
Query: 255 SEYVSGNIFI 264
                  IFI
Sbjct: 232 HHATVHEIFI 241

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 27/263 (10%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD KV+++T A+ G+G+   L  A+ G +++A     D  +S   E+ K  G   R   
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIAT----DINESKLQELEKYPGIQTRV-- 56
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNL 133
             LDV+      +  + +      R+D L N AG    G V   LD  E++W+  M  N+
Sbjct: 57  --LDVTK-----KKQIDQFANEVERLDVLFNVAGFVHHGTV---LDCEEKDWDFSMNLNV 106
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
              +L+ K    +M  A + G++IN+SS+A++ +G +   V Y+++KA +  +TK ++ +
Sbjct: 107 RSMYLMIKAFLPKML-AQKSGNIINMSSVASSVKGVVNRCV-YSTTKAAVIGLTKSVAAD 164
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLVR 248
                IR N +CPG   +   +  ++     ++  N+   R    R F T +  +  L  
Sbjct: 165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR-FATAEE-IAMLCV 222
Query: 249 YLVHDSSEYVSGNIFIVDSGATL 271
           YL  D S YV+GN  I+D G +L
Sbjct: 223 YLASDESAYVTGNPVIIDGGWSL 245

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 16/269 (5%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
             +   KV ++TG+S+G+GR   +  A+ G ++    R  +RL+    +I     S    
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS---GAVKSPLDLTEEEWNHIMK 130
            +V  DV+ + A  +  +      FG++D LVNNAG +      K+    + E ++  + 
Sbjct: 61  NSVVADVTTD-AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLN 119
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            NL     ++K     +  ++ +G ++NISSIA+      P    Y+ +KA ++  T+  
Sbjct: 120 LNLRSVIALTKKAVPHL--SSTKGEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNT 176
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVAS--RTYPLRDFGTTDPAL 243
           +++L  H IRVNSI PGL  +     +       K + + +A+     P    G     +
Sbjct: 177 AIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD-I 235
Query: 244 TSLVRYLV-HDSSEYVSGNIFIVDSGATL 271
             ++ +L    +S Y+ G+  +VD G++L
Sbjct: 236 AEVIAFLADRKTSSYIIGHQLVVDGGSSL 264

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQ-SGSSVRA 73
            ++    +VTGA+  +GR   + L + G R+V       +   SL DE+NK+ S ++V  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVX 79
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN------- 126
            A   + +   A+ E  +   + AFGR D LVNNA  S    +PL   + E N       
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA--SAFYPTPLVQGDHEDNSNGKTVE 137
Query: 127 ----HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYAS 178
                ++ TN    +L++     R +  N   +  N+S +    A   +  +   + Y  
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSL-YNM 196
Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFG 237
            K  L  +T+  +LEL  + IRVN + PG+    +  G  +KD W      R  PL    
Sbjct: 197 GKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRRE 251
Query: 238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            +   +   V +LV  S++Y++G+I  VD G +L
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 24/251 (9%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           ++ V+VTG + G+G      LA  G ++    R               SG+      VE+
Sbjct: 35  SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR--------------GSGAPKGLFGVEV 80
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DV+ +  A++ +     E  G ++ LV+NAG+S A    + +TEE++  ++  NLTG++ 
Sbjct: 81  DVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFR 138
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           V++     M+  N+ G +I I+S++      +     YA+SKAG+  M + ++ EL    
Sbjct: 139 VAQRASRSMQR-NKFGRMIFIASVSGLW--GIGNQANYAASKAGVIGMARSIARELSKAN 195
Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHDSSEY 257
           +  N + PG   +++T  L ++  +   A +  P +  GT  PA +  +V +L  + + Y
Sbjct: 196 VTANVVAPGYIDTDMTRALDER--IQQGALQFIPAKRVGT--PAEVAGVVSFLASEDASY 251
Query: 258 VSGNIFIVDSG 268
           +SG +  VD G
Sbjct: 252 ISGAVIPVDGG 262

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 130/260 (50%), Gaps = 11/260 (4%)
Query: 9   LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG 68
           +  E    L++ V +VTGA++G+GR      AKAG  +V    + +  +++   I +  G
Sbjct: 2   MSYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG 61
Query: 69  SSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
              +A+ +E +V+ +    E  ++ A + FG+I  LVNNAG  G    P D+   ++   
Sbjct: 62  ---KAIGLECNVT-DEQHREAVIKAALDQFGKITVLVNNAGGGG--PKPFDMPMSDFEWA 115
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
            K NL   + +S+     M+ A   G+++NISS+A  +        +Y SSKA +N +T+
Sbjct: 116 FKLNLFSLFRLSQLAAPHMQKAGG-GAILNISSMAGENTNVRM--ASYGSSKAAVNHLTR 172
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
            ++ ++G   IRVN+I PG  K++    ++  +    +   T PL   G     + +   
Sbjct: 173 NIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT-PLGRLGEAQD-IANAAL 230
Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L   ++ ++SG +  V  G
Sbjct: 231 FLCSPAAAWISGQVLTVSGG 250

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQ-SGSSVRA 73
            ++    +VTGA+  +GR   + L + G R+V       +   SL DE+NK+ S ++V  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN------- 126
            A   + +   A+ E  +   + AFGR D LVNNA  S    +PL   + E N       
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA--SAFYPTPLVQGDHEDNSNGKTVE 137
Query: 127 ----HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYAS 178
                ++ TN    +L++     R +  N   +  N+S +    A   +  +   + Y  
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSL-YNM 196
Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFG 237
            K  L  +T+  +LEL  + IRVN + PG+    +  G  +KD W      R  PL    
Sbjct: 197 GKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRRE 251
Query: 238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            +   +   V +LV  S++Y++G+I  VD G +L
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 34/262 (12%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV---------AAARRVDRLKSLCDEINKQ 66
           + D +VV+VTGA +GLGR + L  A+ G  +V            +       + +EI ++
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 67  SGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN 126
            G +V       D    G   E  V+ A +AFGRID +VNNAG+    +S   +++E+W+
Sbjct: 87  GGKAV----ANYDSVEEG---EKVVKTALDAFGRIDVVVNNAGIL-RDRSFARISDEDWD 138
Query: 127 HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
            I + +L GS+ V++     M+   Q+   I ++S A+   G   G   Y+++K GL  +
Sbjct: 139 IIHRVHLRGSFQVTRAAWEHMK--KQKYGRIIMTSSASGIYGNF-GQANYSAAKLGLLGL 195
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
              L++E     I  N+I P    S +T+ +M +D +  +                +  L
Sbjct: 196 ANSLAIEGRKSNIHCNTIAPNA-GSRMTQTVMPEDLVEALKPEY------------VAPL 242
Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
           V +L H+S E  +G +F V +G
Sbjct: 243 VLWLCHESCEE-NGGLFEVGAG 263

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 26/273 (9%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQ-SGSSVRAM 74
           ++    +VTGA+  +GR   + L + G R+V       +   SL DE+NK+ S ++V   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN-------- 126
           A   + +   A+ E  +   + AFGR D LVNNA  S    +PL   + E N        
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA--SAFYPTPLVQGDHEDNSNGKTVET 118
Query: 127 ---HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYASS 179
               ++ TN    +L++     R +  N   +  N+S +    A   +  +   + Y   
Sbjct: 119 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSL-YNMG 177
Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFGT 238
           K  L  +T+  +LEL  + IRVN + PG+    +  G  +KD W      R  PL     
Sbjct: 178 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREA 232
Query: 239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +   +   V +LV  S++Y++G+I  VD G +L
Sbjct: 233 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KVV+++G    LG       A+ G  +V AAR V+RL+ +  ++     +  RA++V
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD---TGRRALSV 65
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D++ + A + + V +  +A+GR+D ++NNA    ++K   + T E     ++  + G+
Sbjct: 66  GTDIT-DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGA 124
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             + +     + ++  +G+V+N++S+         G  AY  +K+ L AM++ L+ ELG 
Sbjct: 125 LRLIQGFTPALEES--KGAVVNVNSMVVRHSQAKYG--AYKMAKSALLAMSQTLATELGE 180
Query: 197 HKIRVNSICPG 207
             IRVNS+ PG
Sbjct: 181 KGIRVNSVLPG 191

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 131/263 (49%), Gaps = 11/263 (4%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV ++TGA SG G       AK G ++V     VDR K+  + +  + G +  A+AV
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVI----VDRDKAGAERVAGEIGDA--ALAV 60
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+S   A ++ +V+ A   FG++D LVNNAG+    ++   +  EE++ I+  N+ G 
Sbjct: 61  AADIS-KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGV 119
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA-YASSKAGLNAMTKCLSLELG 195
           +L++  +    ++   +G    I ++A+T  G+    +A Y ++K  + ++TK L++EL 
Sbjct: 120 YLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA 179
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD--WLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
             KIRV ++ P   ++ +    M +D   +      + P+      D  L     +L   
Sbjct: 180 PAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDD-LAEAAAFLCSP 238
Query: 254 SSEYVSGNIFIVDSGATLPGLPI 276
            +  ++G    VD G ++ G  I
Sbjct: 239 QASMITGVALDVDGGRSIGGRSI 261

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           +V+VTGA++G G        + G +++A  RR +RL+ L DE+             +LDV
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN------LYIAQLDV 55
Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
             N AAIE  +      +  ID LVNNAG++  ++     + E+W  ++ TN  G   ++
Sbjct: 56  R-NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMT 114
Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLP--GGVAYASSKAGLNAMTKCLSLELGVHK 198
           + V   M + N  G +INI S A    G  P  GG  Y ++KA +   +  L  +L    
Sbjct: 115 RAVLPGMVERNH-GHIINIGSTA----GSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169
Query: 199 IRVNSICPGL----------FKSEITEGLMKKDWLNNVA 227
           +RV  I PGL          FK +  +G  +K + N VA
Sbjct: 170 VRVTDIEPGLVGGTEFSNVRFKGD--DGKAEKTYQNTVA 206

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 24/251 (9%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           ++ V+VTG + G+G      LA  G ++    R               SG+      VE 
Sbjct: 15  SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR--------------GSGAPKGLFGVEC 60
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DV+ +  A++ +     E  G ++ LV+NAG+S A    + +TEE++  ++  NLTG++ 
Sbjct: 61  DVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFR 118
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           V++     M+  N+ G +I I S++ +    +     YA+SKAG+  M + ++ EL    
Sbjct: 119 VAQRASRSMQR-NKFGRMIFIGSVSGSW--GIGNQANYAASKAGVIGMARSIARELSKAN 175
Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHDSSEY 257
           +  N + PG   +++T  L ++  +   A +  P +  GT  PA +  +V +L  + + Y
Sbjct: 176 VTANVVAPGYIDTDMTRALDER--IQQGALQFIPAKRVGT--PAEVAGVVSFLASEDASY 231
Query: 258 VSGNIFIVDSG 268
           +SG +  VD G
Sbjct: 232 ISGAVIPVDGG 242

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 24/251 (9%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           ++ V+VTG + G+G      LA  G ++    R               SG+      VE+
Sbjct: 15  SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR--------------GSGAPKGLFGVEV 60
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DV+ +  A++ +     E  G ++ LV+NAG+S A    + +TEE++  ++  NLTG++ 
Sbjct: 61  DVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFR 118
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
           V++     M+  N+ G +I I S++      +     YA+SKAG+  M + ++ EL    
Sbjct: 119 VAQRASRSMQR-NKFGRMIFIGSVSGLW--GIGNQANYAASKAGVIGMARSIARELSKAN 175
Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHDSSEY 257
           +  N + PG   +++T  L ++  +   A +  P +  GT  PA +  +V +L  + + Y
Sbjct: 176 VTANVVAPGYIDTDMTRALDER--IQQGALQFIPAKRVGT--PAEVAGVVSFLASEDASY 231
Query: 258 VSGNIFIVDSG 268
           +SG +  VD G
Sbjct: 232 ISGAVIPVDGG 242

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQ-SGSSVRA 73
            ++    +VTGA+  +GR   + L + G R+V       +   SL DE+NK+ S ++V  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN------- 126
            A   + +   A+ E  +   + AFGR D LVNNA  S    +PL   + E N       
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA--SAFYPTPLVQGDHEDNSNGKTVE 137
Query: 127 ----HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYAS 178
                ++ TN    +L++     R +  N   +  N+S +    A   +  +   + Y  
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSL-YNM 196
Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFG 237
            K  L  +T+  +LEL  + IRVN + PG+    +  G  +KD W      R  PL    
Sbjct: 197 GKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRRE 251
Query: 238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            +   +   V +LV  S++Y++G+I  VD G +L
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           K+V++TGASSG+G       ++ G  ++  ARRV+RLK+L         +    +  ++D
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL---------NLPNTLCAQVD 67
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLTGSWL 138
           V+ +    + ++ +A + +G  DA+VNNAG+   +   +D  E  EW  +   N+ G   
Sbjct: 68  VT-DKYTFDTAITRAEKIYGPADAIVNNAGM--MLLGQIDTQEANEWQRMFDVNVLGLLN 124
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
             + V   M+ A   G++INISSIA   +   P   AY  +K  ++A+++ +  E+    
Sbjct: 125 GMQAVLAPMK-ARNCGTIINISSIAG--KKTFPDHAAYCGTKFAVHAISENVREEVAASN 181
Query: 199 IRVNSICPGLFKSEI 213
           +RV +I P   K+E+
Sbjct: 182 VRVMTIAPSAVKTEL 196

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQ-SGSSVRA 73
            ++    +VTGA+  +GR   + L + G R+V       +   SL DE+NK+ S ++V  
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVX 79
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN------- 126
            A   + +   A+ E  +   + AFGR D LVNNA  S    +PL   + E N       
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA--SAFYPTPLVQGDHEDNSNGKTVE 137
Query: 127 ----HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYAS 178
                ++ TN    +L++     R +  N   +  N+S +    A   +  +   + Y  
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSL-YNM 196
Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFG 237
            K  L  +T+  +LEL  + IRVN + PG+    +  G  +KD W      R  PL    
Sbjct: 197 GKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRRE 251
Query: 238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            +   +   V +LV  S++Y++G+I  VD G +L
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 25/262 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L+ K+ ++TGA+SG+G          G R+    RR D L +   EI         A+ 
Sbjct: 26  RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG------AVG 79
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
           ++ D SAN A ++   +K     GRID L  NAG  G    PL ++TEE+++     N+ 
Sbjct: 80  IQAD-SANLAELDRLYEKVKAEAGRIDVLFVNAG--GGSXLPLGEVTEEQYDDTFDRNVK 136
Query: 135 GS-WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           G  + V K + +  R     GS + ++   A S G  P    YA+SKA L +  +   L+
Sbjct: 137 GVLFTVQKALPLLAR-----GSSVVLTGSTAGSTGT-PAFSVYAASKAALRSFARNWILD 190
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKD------WLNNVASRTYPLRDFGTTDPALTSLV 247
           L    IR+N++ PG  ++     L  KD       LN +A++  P    G  +    + +
Sbjct: 191 LKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQV-PXGRVGRAEEVAAAAL 249
Query: 248 RYLVHDSSEYVSGNIFIVDSGA 269
            +L  D S +V+G    VD G+
Sbjct: 250 -FLASDDSSFVTGAELFVDGGS 270

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 27/261 (10%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L +K+ ++TG ++G+GR      A  G  I  A    D + +   E   ++    R + 
Sbjct: 4   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIA----DLVPAPEAEAAIRNLGR-RVLT 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLT 134
           V+ DVS  G  +E   ++    FGR D LVNNAG+   +  P D LT E+W    + N+ 
Sbjct: 59  VKCDVSQPGD-VEAFGKQVISTFGRCDILVNNAGIYPLI--PFDELTFEQWKKTFEINVD 115
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +L++K     M+  N  G +IN++S   T   ++     Y S+KA     T+ L+ +L
Sbjct: 116 SGFLMAKAFVPGMKR-NGWGRIINLTS--TTYWLKIEAYTHYISTKAANIGFTRALASDL 172
Query: 195 GVHKIRVNSICPGLFKSEITEGL-------MKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           G   I VN+I P L ++  TE         +  + L  +     PL         LT   
Sbjct: 173 GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLD--------LTGAA 224
Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L  D + +++G    VD G
Sbjct: 225 AFLASDDASFITGQTLAVDGG 245

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 26/273 (9%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQ-SGSSVRAM 74
           ++    +VTGA+  +GR   + L + G R+V       +   SL DE+NK+ S ++V   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN-------- 126
           A   + +   A+ E  +   + AFGR D LVNNA  S    +PL   + E N        
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA--SAFYPTPLVQGDHEDNSNGKTVET 118
Query: 127 ---HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYASS 179
               ++ TN    +L++     R +  N   +  N+S +    A   +  +   + Y   
Sbjct: 119 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSL-YNMG 177
Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFGT 238
           K  L  +T+  +LEL  + IRVN + PG+    +  G  +KD W      R  PL     
Sbjct: 178 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREA 232
Query: 239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +   +   V +LV  S++Y++G+I  VD G +L
Sbjct: 233 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE-INKQSGSSVRAMA 75
           L  K+ +VTGAS G+G       AKAG  IV      D  + L D  +     + + A  
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFN----DINQELVDRGMAAYKAAGINAHG 87
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV+ +   I+  V +     G ID LVNNAG+   V   +++T  ++  ++  +L  
Sbjct: 88  YVCDVT-DEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPM-IEMTAAQFRQVIDIDLNA 145
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAAT-SRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            ++VSK V   M      G +INI S+ +   R  +    AYA++K GL  +TK ++ E 
Sbjct: 146 PFIVSKAVIPSMIKKGH-GKIINICSMMSELGRETVS---AYAAAKGGLKMLTKNIASEY 201
Query: 195 GVHKIRVNSICPGLFKSEITEGL--MKKD-----WLNNVASRTYPLRDFGTTDPALTSLV 247
           G   I+ N I PG   +  T  L  ++KD     +   + ++T P   +G  +  +   V
Sbjct: 202 GEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKT-PAARWGEAEDLMGPAV 260
Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L  D+S +V+G+I  VD G
Sbjct: 261 -FLASDASNFVNGHILYVDGG 280

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTGA  G+G+   L L K G  +  A       K++  EIN+  G    A+AV++D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG---HAVAVKVD 59
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSWL 138
           VS +   +  +V++A +  G  D +VNNAGV  A  +P++ +T E  + +   N+ G   
Sbjct: 60  VS-DRDQVFAAVEQARKTLGGFDVIVNNAGV--APSTPIESITPEIVDKVYNINVKGVIW 116
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKCLSLELGV 196
             +      +     G +IN    A +  G +  P    Y+SSK  +  +T+  + +L  
Sbjct: 117 GIQAAVEAFKKEGHGGKIIN----ACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-------------L 243
             I VN  CPG+ K+ +   + ++  ++  A +  PL  +GT + A             +
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQ--VSEAAGK--PL-GYGTAEFAKRITLGRLSEPEDV 227
Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSG 268
            + V YL    S+Y++G   ++D G
Sbjct: 228 AACVSYLASPDSDYMTGQSLLIDGG 252

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 27/265 (10%)
Query: 6   SDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK 65
           ++ L  +   +   KVV++TGAS G+G            R+VA +R +    S   +I+ 
Sbjct: 15  TENLYFQSXXRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK--PSADPDIHT 72
Query: 66  QSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW 125
            +G          D+S    A +  V++  E FGRID+LVNNAGV  A K  ++ T+E++
Sbjct: 73  VAG----------DISKPETA-DRIVREGIERFGRIDSLVNNAGVFLA-KPFVEXTQEDY 120
Query: 126 NHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS-SIAATSRGQLPGGVAYASSKAGLN 184
           +H +  N+ G + +++            G +++I+ S+        P  +A + +K GLN
Sbjct: 121 DHNLGVNVAGFFHITQRAAAEXLKQG-SGHIVSITTSLVDQPXVGXPSALA-SLTKGGLN 178
Query: 185 AMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN-NVASRTYPLRDFGTTDPAL 243
           A+T+ L+ E     +RVN++ PG+ K+              +   R   +RD       +
Sbjct: 179 AVTRSLAXEFSRSGVRVNAVSPGVIKTPXHPAETHSTLAGLHPVGRXGEIRD-------V 231
Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSG 268
              V YL H  + +++G I  VD G
Sbjct: 232 VDAVLYLEH--AGFITGEILHVDGG 254

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 26/273 (9%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQ-SGSSVRAM 74
           ++    +VTGA+  +GR   + L + G R+V       +   SL DE+NK+ S ++V   
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN-------- 126
           A   + +   A+ E  +   + AFGR D LVNNA  S    +PL   + E N        
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA--SAFYPTPLVQGDHEDNSNGKTVET 118
Query: 127 ---HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI----AATSRGQLPGGVAYASS 179
               ++ TN    +L++     R +  N   +  N+S +    A   +  +   + Y   
Sbjct: 119 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSL-YNMG 177
Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFGT 238
           K  L  +T+  +LEL  + IRVN + PG+    +  G  +KD W      R  PL     
Sbjct: 178 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREA 232
Query: 239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +   +   V +LV  S++Y++G+I  VD G +L
Sbjct: 233 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 118/250 (47%), Gaps = 15/250 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV ++TGASSG+G      LA  G  +  AARRV++L++L DE+   +G+ V  +  
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-AGAKVHVL-- 61
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
           ELDV A+   ++ +V    EA G +D LVNNAG+   G V+   D    +W   + TNL 
Sbjct: 62  ELDV-ADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVE---DADTTDWTRXIDTNLL 117
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G    ++     +     +G+V+  SSIA   R  +     Y ++K G+NA ++ L  E+
Sbjct: 118 GLXYXTRAALPHL--LRSKGTVVQXSSIAG--RVNVRNAAVYQATKFGVNAFSETLRQEV 173
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
               +RV  I PG   +E+   +           R   +R     D  +   VRY V   
Sbjct: 174 TERGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQD--IAEAVRYAVTAP 231
Query: 255 SEYVSGNIFI 264
                  IFI
Sbjct: 232 HHATVHEIFI 241

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           L P     +  + +TGA+SG G       A+AG  +V   RR +RL++L  E++ ++   
Sbjct: 13  LVPRGSHXSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT--- 69
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            R + + LDV  + AA   +V    E F  +  L+NNAG++           ++W+  + 
Sbjct: 70  -RVLPLTLDVR-DRAAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVD 127
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TN+ G    ++ +  R+       S++N+ S+A   +   PG   Y  +KA +   +  L
Sbjct: 128 TNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAG--KWPYPGSHVYGGTKAFVEQFSLNL 185
Query: 191 SLELGVHKIRVNSICPGLFKSEIT 214
             +L    +RV ++ PGL +SE +
Sbjct: 186 RCDLQGTGVRVTNLEPGLCESEFS 209

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 23/254 (9%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA--AARRVDRLKSLCDEINKQSGSSVRAM 74
           LD KV +VTGA+ G+G       A+ G  +VA       + LK + D++           
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG--------GT 262
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           A+ LDV+A+ A  + +        G++D LVNNAG++   K   ++ E+ W+ ++  NL 
Sbjct: 263 ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT-RDKLLANMDEKRWDAVIAVNLL 321
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
               +++ + +      + G VI +SS+A  A +RGQ      YA++KAG+  + + L+ 
Sbjct: 322 APQRLTEGL-VGNGTIGEGGRVIGLSSMAGIAGNRGQ----TNYATTKAGMIGLAEALAP 376
Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLV 251
            L    I +N++ PG  ++++TE +        V  R   L  F    P  +  L+ Y  
Sbjct: 377 VLADKGITINAVAPGFIETKMTEAIPLA--TREVGRRLNSL--FQGGQPVDVAELIAYFA 432
Query: 252 HDSSEYVSGNIFIV 265
             +S  V+GN   V
Sbjct: 433 SPASNAVTGNTIRV 446

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKQSGSSVR 72
           L  KV +VTG++SG+G      LA  G  IV      A  ++++++    +  Q G  V 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA---GLAAQHGVKVL 58
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMK 130
               +L   + G A+   V  A    GRID LVNNAG+     + L  D   E+W+ I+ 
Sbjct: 59  YDGADL---SKGEAVRGLVDNAVRQMGRIDILVNNAGIQ---HTALIEDFPTEKWDAILA 112
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISS----IAATSRGQLPGGVAYASSKAGLNAM 186
            NL+  +  +      M+     G +INI+S    +A+ ++       AY ++K G+   
Sbjct: 113 LNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKS------AYVAAKHGVVGF 165
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITE----------GLMKKDWLNNVASRTYPLRDF 236
           TK  +LE     I  N+ICPG  +S + E          G+ ++     + S   P   F
Sbjct: 166 TKVTALETAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQF 225
Query: 237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
             T   L     +L  D++  ++G    VD G T
Sbjct: 226 -VTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L++++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+++G   +   +
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L ++      +   Q+    + R+D +++NAG+ G V    +   + W  +M+ N+  +
Sbjct: 70  DL-LTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +++++ +   +  ++    V   SS+    R       AYA+SK     M + L+ E   
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGMMQVLADEY-Q 184
Query: 197 HKIRVNSICPG 207
            ++RVN I PG
Sbjct: 185 QRLRVNCINPG 195

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L++++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+++G   +   +
Sbjct: 12  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L ++      +   Q+    + R+D +++NAG+ G V    +   + W  +M+ N+  +
Sbjct: 72  DL-LTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNAT 130
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +++++ +   +  ++    V   SS+    R       AYA+SK     M + L+ E   
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGMMQVLADEY-Q 186
Query: 197 HKIRVNSICPG 207
            ++RVN I PG
Sbjct: 187 QRLRVNCINPG 197

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L++++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+++G   +   +
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L ++      +   Q+    + R+D +++NAG+ G V    +   + W  +M+ N+  +
Sbjct: 68  DL-LTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNAT 126
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +++++ +   +  ++    V   SS+    R       AYA+SK     M + L+ E   
Sbjct: 127 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGMMQVLADEY-Q 182
Query: 197 HKIRVNSICPG 207
            ++RVN I PG
Sbjct: 183 QRLRVNCINPG 193

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 39  LAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF 98
           L+  G + V A+R++D LK+  ++I+ Q+G+ V   A++ DV  +   ++N+V +  +  
Sbjct: 46  LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVH--AIQCDVR-DPDMVQNTVSELIKVA 102
Query: 99  GRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVI 157
           G  + ++NNA  +G   SP + L+   W  I    L G+  V+  +  ++  A +  + +
Sbjct: 103 GHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFL 160
Query: 158 NISSI-AATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE---- 212
           +I++I A T  G +   V  AS+KAG+ AM+K L+ E G + +R N I PG  K++    
Sbjct: 161 SITTIYAETGSGFV---VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 217
Query: 213 --ITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
                G  +K+ +  +     P    GT +  L +L  +L  D + +++G +   D G
Sbjct: 218 RLDPTGTFEKEMIGRI-----PCGRLGTVE-ELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 41/261 (15%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           N+ V+VTG   G+G++ CLD  +AG ++        R      E                
Sbjct: 2   NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-------RPNLFYFHG 54
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNA--GVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           DV A+   ++  V+ A E   RID LVNNA  G  G + S   L  EE+++I+   L   
Sbjct: 55  DV-ADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSS---LLYEEFDYILSVGLKAP 110
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S+ +C R      +G +INI+S  A      P   AYAS+K G+ A+T  L++ LG 
Sbjct: 111 YELSR-LC-RDELIKNKGRIINIASTRAFQSE--PDSEAYASAKGGIVALTHALAMSLG- 165
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT-------TDPALTSLVRY 249
             + VN I PG              W+N    + +   D          T   ++++V +
Sbjct: 166 PDVLVNCIAPG--------------WINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLF 211
Query: 250 LVHDSSEYVSGNIFIVDSGAT 270
           L     ++++G   IVD G +
Sbjct: 212 LCQ--QDFITGETIIVDGGMS 230

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKQSGSSVR 72
           L  KV +VTG++SG+G      LA  G  IV      A  ++++++    +  Q G  V 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA---GLAAQHGVKVL 58
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMK 130
               +L   + G A+   V  A    GRID LVNNAG+     + L  D   E+W+ I+ 
Sbjct: 59  YDGADL---SKGEAVRGLVDNAVRQMGRIDILVNNAGIQ---HTALIEDFPTEKWDAILA 112
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISS----IAATSRGQLPGGVAYASSKAGLNAM 186
            NL+  +  +      M+     G +INI+S    +A+ ++       AY ++K G+   
Sbjct: 113 LNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKS------AYVAAKHGVVGF 165
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITE----------GLMKKDWLNNVASRTYPLRDF 236
           TK  +LE     I  N+ICPG  ++ + E          G+ ++     + S   P   F
Sbjct: 166 TKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQF 225
Query: 237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
             T   L     +L  D++  ++G    VD G T
Sbjct: 226 -VTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 16/260 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV  VTG+S G+G       A+AG   VA            + + K  G  V + A 
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGAD-VAIWYNSHPADEKAEHLQKTYG--VHSKAY 88
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLTG 135
           + ++S +  ++E ++ +  + FG ID  V NAGV+      +D+   + WN I+  +L G
Sbjct: 89  KCNIS-DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNG 147
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +  S  +  ++   N +GS+I  SSI+            Y ++KA    + K L++E  
Sbjct: 148 VYYCSHNIG-KIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA 206
Query: 196 VHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
               RVN+I PG   ++IT+     MK  W      +  PL   G T   L     YL  
Sbjct: 207 PFA-RVNTISPGYIDTDITDFASKDMKAKWW-----QLTPLGREGLTQ-ELVGGYLYLAS 259
Query: 253 DSSEYVSGNIFIVDSGATLP 272
           ++S + +G+  ++D G T P
Sbjct: 260 NASTFTTGSDVVIDGGYTCP 279

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKQSGSSVR 72
           L  KV +VTG++SG+G      LA  G  IV      A  ++++++    +  Q G  V 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA---GLAAQHGVKVL 58
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMK 130
               +L   + G A+   V  A    GRID LVNNAG+     + L  D   E+W+ I+ 
Sbjct: 59  YDGADL---SKGEAVRGLVDNAVRQMGRIDILVNNAGIQ---HTALIEDFPTEKWDAILA 112
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISS----IAATSRGQLPGGVAYASSKAGLNAM 186
            NL+  +  +      M+     G +INI+S    +A+ ++       AY ++K G+   
Sbjct: 113 LNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKS------AYVAAKHGVVGF 165
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITE----------GLMKKDWLNNVASRTYPLRDF 236
           TK  +LE     I  N+ICPG  ++ + E          G+ ++     + S   P   F
Sbjct: 166 TKVTALETAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQF 225
Query: 237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
             T   L     +L  D++  ++G    VD G T
Sbjct: 226 -VTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 63  INKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLT 121
           I + SG   R + +  D+ A+ ++ + +V      FGRID LVNNAG++  V+   LDL 
Sbjct: 71  IAELSGLGARVIFLRADL-ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLK 129
Query: 122 EEEWNHIMKTNLTGSWLVSKYV--CIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS 179
            E ++ I+  NL G+   ++ V       DA    S+INI+S++A      P  + Y  S
Sbjct: 130 PENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTS--PERLDYCXS 187
Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT 239
           KAGL A ++ L+L L    I V  + PG+ +S+ T  +  K +   + S   P R +G  
Sbjct: 188 KAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAVSGK-YDGLIESGLVPXRRWGEP 246
Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +  + ++V  L      + +G++   D G ++
Sbjct: 247 ED-IGNIVAGLAGGQFGFATGSVIQADGGLSI 277

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 19/252 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV +VTGA+ G+G       A+ G  +VA    +D ++S  + +  ++ S V   A+
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENL-AETASKVGGTAL 256
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+A+ A  + S        G+ D LVNNAG++   K   ++ +  W+ ++  NL   
Sbjct: 257 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAP 315
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +++ + +      + G VI +SSIA  A +RGQ      YA++KAG+  +T+ L+  L
Sbjct: 316 LRLTEGL-VGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 370
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHD 253
               I +N++ PG  ++++T  +        V  R   L   G   P  +   + Y    
Sbjct: 371 AAKGITINAVAPGFIETQMTAAIPLA--TREVGRRLNSLLQGG--QPVDVAEAIAYFASP 426
Query: 254 SSEYVSGNIFIV 265
           +S  V+GN+  V
Sbjct: 427 ASNAVTGNVIRV 438

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 19/252 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV +VTGA+ G+G       A+ G  +VA    +D ++S  + +  ++ S V   A+
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENL-AETASKVGGTAL 285
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+A+ A  + S        G+ D LVNNAG++   K   ++ +  W+ ++  NL   
Sbjct: 286 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAP 344
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +++ + +      + G VI +SSIA  A +RGQ      YA++KAG+  +T+ L+  L
Sbjct: 345 LRLTEGL-VGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 399
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHD 253
               I +N++ PG  ++++T  +        V  R   L   G   P  +   + Y    
Sbjct: 400 AAKGITINAVAPGFIETQMTAAIPLA--TREVGRRLNSLLQGG--QPVDVAEAIAYFASP 455
Query: 254 SSEYVSGNIFIV 265
           +S  V+GN+  V
Sbjct: 456 ASNAVTGNVIRV 467

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 19/252 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV +VTGA+ G+G       A+ G  +VA    +D ++S  + +  ++ S V   A+
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENL-AETASKVGGTAL 272
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+A+ A  + S        G+ D LVNNAG++   K   ++ +  W+ ++  NL   
Sbjct: 273 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAP 331
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +++ + +      + G VI +SSIA  A +RGQ      YA++KAG+  +T+ L+  L
Sbjct: 332 LRLTEGL-VGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 386
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHD 253
               I +N++ PG  ++++T  +        V  R   L   G   P  +   + Y    
Sbjct: 387 AAKGITINAVAPGFIETQMTAAIPLA--TREVGRRLNSLLQGG--QPVDVAEAIAYFASP 442
Query: 254 SSEYVSGNIFIV 265
           +S  V+GN+  V
Sbjct: 443 ASNAVTGNVIRV 454

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 19/252 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV +VTGA+ G+G       A+ G  +VA    +D ++S  + +  ++ S V   A+
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENL-AETASKVGGTAL 264
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+A+ A  + S        G+ D LVNNAG++   K   ++ +  W+ ++  NL   
Sbjct: 265 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAP 323
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +++ + +      + G VI +SSIA  A +RGQ      YA++KAG+  +T+ L+  L
Sbjct: 324 LRLTEGL-VGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 378
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHD 253
               I +N++ PG  ++++T  +        V  R   L   G   P  +   + Y    
Sbjct: 379 AAKGITINAVAPGFIETQMTAAIPLA--TREVGRRLNSLLQGG--QPVDVAEAIAYFASP 434
Query: 254 SSEYVSGNIFIV 265
           +S  V+GN+  V
Sbjct: 435 ASNAVTGNVIRV 446

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 19/252 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV +VTGA+ G+G       A+ G  +VA    +D ++S  + +  ++ S V   A+
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENL-AETASKVGGTAL 248
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+A+ A  + S        G+ D LVNNAG++   K   ++ +  W+ ++  NL   
Sbjct: 249 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAP 307
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +++ + +      + G VI +SSIA  A +RGQ      YA++KAG+  +T+ L+  L
Sbjct: 308 LRLTEGL-VGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 362
Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHD 253
               I +N++ PG  ++++T  +        V  R   L   G   P  +   + Y    
Sbjct: 363 AAKGITINAVAPGFIETQMTAAIPLA--TREVGRRLNSLLQGG--QPVDVAEAIAYFASP 418
Query: 254 SSEYVSGNIFIV 265
           +S  V+GN+  V
Sbjct: 419 ASNAVTGNVIRV 430

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 27/268 (10%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAM 74
           +LD KV +VTG+  G+G    + L + G ++V   A      + +  EI K  GS   A+
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI-KALGSD--AI 71
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTN 132
           A++ D+      I     +A   FG +D  V+N+GV   G +K   D+TEEE++ +   N
Sbjct: 72  AIKADIR-QVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLK---DVTEEEFDRVFSLN 127
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
             G + V++     +     EG  I ++S   +    +P    Y+ SK  +++  +  S 
Sbjct: 128 TRGQFFVAREAYRHL----TEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSK 183
Query: 193 ELGVHKIRVNSICPG-----LFKSEITEGLMKK------DWLNNVASRTYPLRDFGTTDP 241
           + G  KI VN++ PG     +F  E++   +        +    +A+   PL   G    
Sbjct: 184 DCGDKKITVNAVAPGGTVTDMFH-EVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQD 242
Query: 242 ALTSLVRYLVHDSSEYVSGNIFIVDSGA 269
            + ++V +LV    E+V+G +  +D GA
Sbjct: 243 -VANVVGFLVSKEGEWVNGKVLTLDGGA 269

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 30/256 (11%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +   VTG SSG+G      LA  G  +   AR    + +  D + + +G  V   + ++ 
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL-RAAGHDVDGSSCDVT 83
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
            +     +  +V  A E FG I  LVN+AG +G  ++  DL +  W  ++ TNLTG + V
Sbjct: 84  STDE---VHAAVAAAVERFGPIGILVNSAGRNGGGETA-DLDDALWADVLDTNLTGVFRV 139
Query: 140 SKYVCIR---MRDANQEGSVINISSIAATSRGQLPGGVAYAS----SKAGLNAMTKCLSL 192
           ++ V +R   MR+A   G ++NI+S           GV YA+    SK G+   TK +  
Sbjct: 140 TREV-LRAGGMREAGW-GRIVNIASTGGKQ------GVMYAAPYTASKHGVVGFTKSVGF 191
Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMK---KDW------LNNVASRTYPLRDFGTTDPAL 243
           EL    I VN++CPG  ++ + E + +   + W      ++   +   PL  + T +  +
Sbjct: 192 ELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEE-V 250
Query: 244 TSLVRYLVHDSSEYVS 259
             LV YLV D++  ++
Sbjct: 251 AGLVGYLVTDAAASIT 266

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 22/262 (8%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTG++SG+G      LA+AG  IV     ++        + + +   V+A+  
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIV-----LNGFGDPAPALAEIARHGVKAVHH 56
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTG 135
             D+S + A IE     A   FG +D LVNNAG+     +P++    E W+ I+  NL+ 
Sbjct: 57  PADLS-DVAQIEALFALAEREFGGVDILVNNAGIQHV--APVEQFPLESWDKIIALNLSA 113
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +  ++     MR  N  G +INI+S+         G  AY ++K G+  +TK + LE  
Sbjct: 114 VFHGTRLALPGMRARNW-GRIINIASVHGLVGST--GKAAYVAAKHGVVGLTKVVGLETA 170
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLN---------NVASRTYPLRDFGTTDPALTSL 246
              +  N+ICPG   + + +  +     N         ++ +   P   F  T   L  L
Sbjct: 171 TSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAF-VTPEHLGEL 229
Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
           V +L  ++   V G  + VD G
Sbjct: 230 VLFLCSEAGSQVRGAAWNVDGG 251

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
Query: 46  IVAAARRVDRLKSLCDEINK--QSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDA 103
           ++   R  D+L     E+     +G ++R    ++      A   ++V  AW   GR+  
Sbjct: 38  VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV-TAWH--GRLHG 94
Query: 104 LVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA 163
           +V+ AG S  +     +  E W   +  N+ G+  V K+    M      GS + ISSIA
Sbjct: 95  VVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGG-GSFVGISSIA 153
Query: 164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL 223
           A++  +  G  AY  +K+ ++ + +  + ELG   +RVNSI PGL ++++   + +   L
Sbjct: 154 ASNTHRWFG--AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAEL 211
Query: 224 NNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFSSL 280
           ++  +   PL   G  +  + ++  +L+ D++ +V+G +  VD G  L   P FS++
Sbjct: 212 SSDYAMCTPLPRQGEVED-VANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAM 267

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V ++TG +SGLG      L   G   V           L D  N +  +  + +      
Sbjct: 11  VAVITGGASGLGLSTAKRLVGQGATAV-----------LLDVPNSEGETEAKKLGGNCIF 59
Query: 81  SANGAAIENSVQKAW----EAFGRIDALVNNAGVSGAVKSPLD-----LTEEEWNHIMKT 131
           +      E  VQ A     E FGRID  VN AG++ A+K+  +      T E++  ++  
Sbjct: 60  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 119
Query: 132 NLTGSWLVSKYVCIRM-----RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
           NL G++ V + V   M         Q G +IN +S+AA   GQ+ G  AY++SK G+  M
Sbjct: 120 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAF-EGQV-GQAAYSASKGGIVGM 177
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-YPLRDFGTTDPA-LT 244
           T  ++ +L    IRV +I PGLF + +   L  K   N +AS+  +P R     DPA   
Sbjct: 178 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDK-VRNFLASQVPFPSR---LGDPAEYA 233
Query: 245 SLVRYLVHDSSEYVSGNIFIVD 266
            LV+ ++ +   +++G +  +D
Sbjct: 234 HLVQMVIENP--FLNGEVIRLD 253

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V ++TG +SGLG      L   G   V           L D  N +  +  + +      
Sbjct: 12  VAVITGGASGLGLSTAKRLVGQGATAV-----------LLDVPNSEGETEAKKLGGNCIF 60
Query: 81  SANGAAIENSVQKAW----EAFGRIDALVNNAGVSGAVKSPLD-----LTEEEWNHIMKT 131
           +      E  VQ A     E FGRID  VN AG++ A+K+  +      T E++  ++  
Sbjct: 61  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 132 NLTGSWLVSKYVCIRM-----RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
           NL G++ V + V   M         Q G +IN +S+AA   GQ+ G  AY++SK G+  M
Sbjct: 121 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAF-EGQV-GQAAYSASKGGIVGM 178
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-YPLRDFGTTDPA-LT 244
           T  ++ +L    IRV +I PGLF + +   L  K   N +AS+  +P R     DPA   
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDK-VRNFLASQVPFPSR---LGDPAEYA 234
Query: 245 SLVRYLVHDSSEYVSGNIFIVD 266
            LV+ ++ +   +++G +  +D
Sbjct: 235 HLVQMVIENP--FLNGEVIRLD 254

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 34/262 (12%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           + D +VV+VTGA  GLGR + L  A+ G  +V     V+ L      + K  GSS     
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVV-----VNDLGGDFKGVGK--GSSAADKV 58
Query: 76  VELDVSANGAAIENS---------VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN 126
           VE      G A+ N          V+ A + FGRID +VNNAG+    +S   +++E+W+
Sbjct: 59  VEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWD 117
Query: 127 HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
            I + +L GS+ V++      +  N  G +I  +S A+   G   G   Y+++K GL  +
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHXKKQNY-GRIIXTAS-ASGIYGNF-GQANYSAAKLGLLGL 174
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
              L +E   + I  N+I P    S  TE +  +D +  +                +  L
Sbjct: 175 ANTLVIEGRKNNIHCNTIAPNA-GSRXTETVXPEDLVEALKPEY------------VAPL 221
Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
           V +L H+S E  +G +F V +G
Sbjct: 222 VLWLCHESCEE-NGGLFEVGAG 242

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           V ++TG +SGLG      L   G   V           L D  N +  +  + +      
Sbjct: 12  VAVITGGASGLGLSTAKRLVGQGATAV-----------LLDVPNSEGETEAKKLGGNCIF 60
Query: 81  SANGAAIENSVQKAW----EAFGRIDALVNNAGVSGAVKSPLD-----LTEEEWNHIMKT 131
           +      E  VQ A     E FGRID  VN AG++ A+K+  +      T E++  ++  
Sbjct: 61  APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 132 NLTGSWLVSKYVCIRM-----RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
           NL G++ V + V   M         Q G +IN +S+AA   GQ+ G  AY++SK G+  M
Sbjct: 121 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAF-EGQV-GQAAYSASKGGIVGM 178
Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTS 245
           T  ++ +L    IRV +I PGLF + +   L   D + N  +   P       DPA    
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTL--PDTVRNFLASQVPFPSR-LGDPAEYAH 235
Query: 246 LVRYLVHDSSEYVSGNIFIVD 266
           LV+ ++ +   +++G +  +D
Sbjct: 236 LVQMVIENP--FLNGEVIRLD 254

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 20/262 (7%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L+ K  ++TG++ G+GR F     + G  +  A   ++R +    EI         A A
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA------AYA 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DV+   + I+ ++    E  G +D LVNNA +   +   +++T E +  +   N+ G
Sbjct: 59  VQXDVTRQDS-IDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAG 116
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +    +    +     + G +IN +S  A  RG+    + Y ++KA + ++T+   L+L 
Sbjct: 117 TLFTLQAAARQXIAQGRGGKIINXAS-QAGRRGEALVAI-YCATKAAVISLTQSAGLDLI 174
Query: 196 VHKIRVNSICPGLFKSEITEGL---------MKKDWLNNVASRTYPLRDFGTTDPALTSL 246
            H+I VN+I PG+   E  +G+           +     +     P    GT +  LT  
Sbjct: 175 KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAED-LTGX 233
Query: 247 VRYLVHDSSEYVSGNIFIVDSG 268
             +L    S+Y+    + VD G
Sbjct: 234 AIFLASAESDYIVSQTYNVDGG 255

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 27/268 (10%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAM 74
           +LD KV +VTG+  G+G    + L + G ++V   A      + +  EI K  GS   A+
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI-KALGSD--AI 71
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTN 132
           A++ D+      I     +A   FG +D  V+N+GV   G +K   D+TEEE++ +   N
Sbjct: 72  AIKADIR-QVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLK---DVTEEEFDRVFSLN 127
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
             G + V++     +     EG  I ++S   +    +P    ++ SK  +++  +  S 
Sbjct: 128 TRGQFFVAREAYRHL----TEGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSK 183
Query: 193 ELGVHKIRVNSICPG-----LFKSEITEGLMKK------DWLNNVASRTYPLRDFGTTDP 241
           + G  KI VN++ PG     +F  E++   +        +    +A+   PL   G    
Sbjct: 184 DCGDKKITVNAVAPGGTVTDMFH-EVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQD 242
Query: 242 ALTSLVRYLVHDSSEYVSGNIFIVDSGA 269
            + ++V +LV    E+V+G +  +D GA
Sbjct: 243 -VANVVGFLVSKEGEWVNGKVLTLDGGA 269

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L N++++VTGAS G+GRE  L  A+ G  ++   R  ++L+ +   I  +     +   +
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L ++           +    + R+D +++NAG+ G +    +   + W  +M+ N+  +
Sbjct: 72  DL-LTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNAT 130
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +++++ +   +  ++    V   SS+    R       AYA+SK     M + L+ E   
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYATSKFATEGMMQVLADEYQN 187
Query: 197 HKIRVNSICPG 207
             +RVN I PG
Sbjct: 188 RSLRVNCINPG 198

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 24/208 (11%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKQSGSSVR 72
           L  K  +VTG++SG+G     +LAKAG  +V         ++R +S  +     S   V+
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLE-----SKFGVK 56
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKT 131
           A  +  D+S +  A  + + KA EA G +D LVNNAG+     +P++    ++WN I+  
Sbjct: 57  AYYLNADLS-DAQATRDFIAKAAEALGGLDILVNNAGIQHT--APIEEFPVDKWNAIIAL 113
Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISS----IAATSRGQLPGGVAYASSKAGLNAMT 187
           NL+  +  +      M+     G +INI+S    +A+ ++       AY ++K G+  +T
Sbjct: 114 NLSAVFHGTAAALPIMQKQGW-GRIINIASAHGLVASVNKS------AYVAAKHGVVGLT 166
Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITE 215
           K  +LE     I  N+ICPG  ++ + E
Sbjct: 167 KVTALENAGKGITCNAICPGWVRTPLVE 194

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 12/257 (4%)
Query: 17  LDNKVVMVTGAS--SGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRA 73
           L  KVV+VTGAS   G+G E     A+ G  + +  A R    +    E+ K  G   +A
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
              ++D   +  + E  V+     FG+IDA + NAG + A    LD + E WNH+++ +L
Sbjct: 78  YKCQVD---SYESCEKLVKDVVADFGQIDAFIANAGAT-ADSGILDGSVEAWNHVVQVDL 133
Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G++  +K V    ++    GS++  +S++           +Y  +KAG   M + L+ E
Sbjct: 134 NGTFHCAKAVGHHFKERGT-GSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                 RVNSI PG   + +++ + K+     +     P+   G     L     Y   D
Sbjct: 193 W-RDFARVNSISPGYIDTGLSDFVPKE--TQQLWHSMIPMGRDGLAKE-LKGAYVYFASD 248
Query: 254 SSEYVSGNIFIVDSGAT 270
           +S Y +G   ++D G T
Sbjct: 249 ASTYTTGADLLIDGGYT 265

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA 82
           ++TGAS G+G      LA  G R+V  AR    L+ + DEI + +      + + LD++ 
Sbjct: 11  IITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDITD 70
Query: 83  NGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
              A +  ++   + +G +D LVN A     G++  P+D     +  I + N+   + + 
Sbjct: 71  CTKA-DTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVD----NFRKIXEINVIAQYGIL 125
Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
           K V   +    + G + N++S AA   G   GG+ Y S+K  L  + + L  EL    IR
Sbjct: 126 KTVT-EIXKVQKNGYIFNVASRAA-KYGFADGGI-YGSTKFALLGLAESLYRELAPLGIR 182
Query: 201 VNSICPG------------LFKSEITEGLMKKDWLNNV 226
           V ++CPG             FK E  E +   D LN +
Sbjct: 183 VTTLCPGWVNTDXAKKAGTPFKDE--EXIQPDDLLNTI 218

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 43  GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRID 102
           G + V A+R+ D LK+  ++I+ Q+G+ V   A++ DV  +   ++N+V +  +  G  +
Sbjct: 50  GAQCVIASRKXDVLKATAEQISSQTGNKVH--AIQCDVR-DPDXVQNTVSELIKVAGHPN 106
Query: 103 ALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS 161
            ++NNA  +G   SP + L+   W  I    L G+  V+  +  ++  A +  + ++I++
Sbjct: 107 IVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT 164
Query: 162 I-AATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE------IT 214
           I A T  G +   V  AS+KAG+ A +K L+ E G +  R N I PG  K++        
Sbjct: 165 IYAETGSGFV---VPSASAKAGVEAXSKSLAAEWGKYGXRFNVIQPGPIKTKGAFSRLDP 221
Query: 215 EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
            G  +K+ +  +     P    GT +  L +L  +L  D + +++G +   D G
Sbjct: 222 TGTFEKEXIGRI-----PCGRLGTVE-ELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           QL ++V +VTGASSGLG      LA+ G  ++     +D      +E   + G++VR   
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLG----LDLKPPAGEEPAAELGAAVRFR- 58
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK-----SPLDLTEEEWNHIMK 130
              DV+ N A    ++  A + FG +  LVN AG +   K      P  L  + +   + 
Sbjct: 59  -NADVT-NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHAL--DSFARTVA 114
Query: 131 TNLTGSW----LVSKYVCIRMRDANQE-GSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
            NL G++    L ++       DA+ E G ++N +SIAA   GQ+ G  AYA+SK G+ A
Sbjct: 115 VNLIGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFD-GQI-GQAAYAASKGGVAA 172
Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR 234
           +T   + EL    IRV +I PG+F +    G  +       AS  +P R
Sbjct: 173 LTLPAARELARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAASVPFPPR 221

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 32/263 (12%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  K   VTG S G+G      LA  G  + +      +R +++  EI +  G   RA+A
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG---RAVA 85
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLT 134
           +  D + +  AIE ++++  EA G +D LVN+AG+  +  +PL+ T   +++ +   N  
Sbjct: 86  IRAD-NRDAEAIEQAIRETVEALGGLDILVNSAGIWHS--APLEETTVADFDEVXAVNFR 142
Query: 135 GSWLVSKYVCIRM--RDANQEGSVINISSIAATSRGQL---PGGVAYASSKAGLNAMTKC 189
                + +V IR   R     G +I I S  A    +L   PG   Y++SKA L  +TK 
Sbjct: 143 -----APFVAIRSASRHLGDGGRIITIGSNLA----ELVPWPGISLYSASKAALAGLTKG 193
Query: 190 LSLELGVHKIRVNSICPGLFKSEI--TEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSL 246
           L+ +LG   I VN + PG   ++    +G   +     +A+ +Y        +P  +  L
Sbjct: 194 LARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQRERIATGSY-------GEPQDIAGL 246
Query: 247 VRYLVHDSSEYVSGNIFIVDSGA 269
           V +L     ++V+G    +D GA
Sbjct: 247 VAWLAGPQGKFVTGASLTIDGGA 269

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 87  IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIR 146
           ++  V +    FGR+D +VNNAG     + P + + + +  +++ NL G++ ++K     
Sbjct: 69  VKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY 128
Query: 147 MRDANQEGSVINISS-IAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSIC 205
           +R +  +G+VINISS + A  + Q    V Y ++K  + AMTK L+L+   + +RVN I 
Sbjct: 129 LRKS--QGNVINISSLVGAIGQAQ---AVPYVATKGAVTAMTKALALDESPYGVRVNCIS 183
Query: 206 PG 207
           PG
Sbjct: 184 PG 185

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 29/259 (11%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELD 79
           V ++TG +SGLG      L   G    A+A  +D   S  +   K+ G++ V A A   D
Sbjct: 12  VAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKLGNNCVFAPA---D 64
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA-----VKSPLDLTEEEWNHIMKTNLT 134
           V++    ++ ++  A   FGR+D  VN AG++ A     +K     T E++  ++  NL 
Sbjct: 65  VTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123
Query: 135 GSWLVSKYVCIRM-----RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           G++ V + V   M         Q G +IN +S+AA   GQ+ G  AY++SK G+  MT  
Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-EGQV-GQAAYSASKGGIVGMTLP 181
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-YPLRDFGTTDPA-LTSLV 247
           ++ +L    IRV +I PGLF + +   L +K   N +AS+  +P R     DPA    LV
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-VCNFLASQVPFPSR---LGDPAEYAHLV 237
Query: 248 RYLVHDSSEYVSGNIFIVD 266
           + ++ +   +++G +  +D
Sbjct: 238 QAIIENP--FLNGEVIRLD 254

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 29/259 (11%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELD 79
           V ++TG +SGLG      L   G    A+A  +D   S  +   K+ G++ V A A   D
Sbjct: 12  VAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKLGNNCVFAPA---D 64
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA-----VKSPLDLTEEEWNHIMKTNLT 134
           V++    ++ ++  A   FGR+D  VN AG++ A     +K     T E++  ++  NL 
Sbjct: 65  VTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123
Query: 135 GSWLVSKYVCIRM-----RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           G++ V + V   M         Q G +IN +S+AA   GQ+ G  AY++SK G+  MT  
Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-EGQV-GQAAYSASKGGIVGMTLP 181
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-YPLRDFGTTDPA-LTSLV 247
           ++ +L    IRV +I PGLF + +   L +K   N +AS+  +P R     DPA    LV
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-VRNFLASQVPFPSR---LGDPAEYAHLV 237
Query: 248 RYLVHDSSEYVSGNIFIVD 266
           + ++ +   +++G +  +D
Sbjct: 238 QAIIENP--FLNGEVIRLD 254

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCR-------IVAAARRVDRLKSLCDEINKQSGSSV 71
             ++++TGA  G+GR   L+ A+A          +V ++R    L+ +  E   +   + 
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD 61
Query: 72  RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT 131
              A   D+S + A +        E +G ID LVNNAGV G   +  DLTEE++++ M T
Sbjct: 62  TITA---DIS-DMADVRRLTTHIVERYGHIDCLVNNAGV-GRFGALSDLTEEDFDYTMNT 116
Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           NL G++ +++ +   M +    G +  I+S+AAT          Y  SK G   + + + 
Sbjct: 117 NLKGTFFLTQALFALM-ERQHSGHIFFITSVAATK--AFRHSSIYCMSKFGQRGLVETMR 173
Query: 192 LELGVHKIRVNSICPG 207
           L      +R+  + PG
Sbjct: 174 LYARKCNVRITDVQPG 189

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 127/265 (47%), Gaps = 27/265 (10%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +KV MVTG + G+GR     LA  G  I A A    + +   + I     +  +A+ V L
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDI-AVADLPQQEEQAAETIKLIEAADQKAVFVGL 60
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DV+ + A  ++++ +A E  G  D LVNNAG++  +K  L++TEE+   I   N+   + 
Sbjct: 61  DVT-DKANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
             +    +  +   +G +IN +SIAA      P   AY+++K  +  +T+  + EL    
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQG--FPILSAYSTTKFAVRGLTQAAAQELAPKG 176
Query: 199 IRVNSICPGLFKS----EITEGLMK----------KDWLNNVA-SRTYPLRDFGTTDPAL 243
             VN+  PG+  +    +I   L K          K++ +++A  R     D       +
Sbjct: 177 HTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPED-------V 229
Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSG 268
             LV +L  ++S YV+G + +VD G
Sbjct: 230 AGLVSFLASENSNYVTGQVMLVDGG 254

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 29/259 (11%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELD 79
           V ++TG +SGLG      L   G    A+A  +D   S  +   K+ G++ V A A   D
Sbjct: 14  VAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKLGNNCVFAPA---D 66
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA-----VKSPLDLTEEEWNHIMKTNLT 134
           V++    ++ ++  A   FGR+D  VN AG++ A     +K     T E++  ++  NL 
Sbjct: 67  VTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 125
Query: 135 GSWLVSKYVCIRM-----RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           G++ V + V   M         Q G +IN +S+AA   GQ+ G  AY++SK G+  MT  
Sbjct: 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-EGQV-GQAAYSASKGGIVGMTLP 183
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-YPLRDFGTTDPA-LTSLV 247
           ++ +L    IRV +I PGLF + +   L +K   N +AS+  +P R     DPA    LV
Sbjct: 184 IARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-VCNFLASQVPFPSR---LGDPAEYAHLV 239
Query: 248 RYLVHDSSEYVSGNIFIVD 266
           + ++ +   +++G +  +D
Sbjct: 240 QAIIENP--FLNGEVIRLD 256

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 16/267 (5%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L +KV ++TG + G+G        + G ++V A    D  + +C+ I    GS      
Sbjct: 13  RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI----GSPDVISF 68
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV-SGAVKSPLDLTEEEWNHIMKTNLT 134
           V  DV+ +   + N V       G++D +  N GV S    S L+   E++  +M  N+ 
Sbjct: 69  VHCDVTKD-EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 127
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA--YASSKAGLNAMTKCLSL 192
           G++LV+K+   R+    ++GS++  +SI++ + G+   GV+  Y ++K  +  +T  L  
Sbjct: 128 GAFLVAKHAA-RVMIPAKKGSIVFTASISSFTAGE---GVSHVYTATKHAVLGLTTSLCT 183
Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKD--WLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           ELG + IRVN + P +  S +   +   D   +  +A +   L+        +   V YL
Sbjct: 184 ELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL 243
Query: 251 VHDSSEYVSGNIFIVDSGATL--PGLP 275
             D S+YVSG   ++D G T   P  P
Sbjct: 244 AGDESKYVSGLNLVIDGGYTRTNPAFP 270

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 39  LAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF 98
           L+  G  +V   RR D L +   EI  ++G+ VRA+  ++      AA+  +V+     F
Sbjct: 53  LSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA---EF 109
Query: 99  GRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGS 155
            R+D LVNNAG S     PL ++T E+WN I+  NLTG++L +++   R   A   + G 
Sbjct: 110 ARLDLLVNNAG-SNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQH-AFRXXKAQTPRGGR 167
Query: 156 VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSI 204
           +IN  SI+A +    P    Y ++K  +  +TK  +L+   H I    I
Sbjct: 168 IINNGSISAQT--PRPNSAPYTATKHAITGLTKSTALDGRXHDIACGQI 214

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 10/191 (5%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV ++TGAS G+G      LA+ G  +   AR VDRL+ +  E+ ++ G  V     
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYH 79
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDVS    ++E   +K  E FG +D +V NAG+ G  K   +L+EEE++ +++ NL G 
Sbjct: 80  HLDVS-KAESVEEFSKKVLERFGDVDVVVANAGL-GYFKRLEELSEEEFHEMIEVNLLGV 137
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           W   K       D+ +    + + + +  S   +P G  Y S+K    A+ +   +E   
Sbjct: 138 WRTLKAFL----DSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE--N 191
Query: 197 HKIRVNSICPG 207
             +R   + PG
Sbjct: 192 PDVRFFELRPG 202

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 24/264 (9%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV-----AAARRVDRLKSLCDEINKQSGSS 70
           +L ++  +VTG  SG+GR   +  A+ G  +      A      ++K+L +E  +     
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR----- 100
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            +A+ +  D+S    A  + V KA EA G +D L   AG   A+    DLT E++     
Sbjct: 101 -KAVLLPGDLSDESFA-RSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFA 158
Query: 131 TNLTG-SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
            N+    W+  + + +  + A    S+I  SSI A      P  + YA++KA +   ++ 
Sbjct: 159 VNVFALFWITQEAIPLLPKGA----SIITTSSIQAYQPS--PHLLDYAATKAAILNYSRG 212
Query: 190 LSLELGVHKIRVNSICPG-LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLV 247
           L+ ++    IRVN + PG ++ +    G   +D +     +T P++  G   PA L  + 
Sbjct: 213 LAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQT-PMKRAG--QPAELAPVY 269
Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            YL    S YV+  +  V  G  L
Sbjct: 270 VYLASQESSYVTAEVHGVCGGEHL 293

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L++++++VTGAS G+GRE     A+ G  ++   R  ++L+ +   IN+++G   +   +
Sbjct: 10  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L ++      +   Q+    + R+D +++NAG+ G V    +   + W  + + N+  +
Sbjct: 70  DL-LTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNAT 128
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +++ +   +  ++    V   SS+    R       AYA+SK       + L+ E   
Sbjct: 129 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW---GAYAASKFATEGXXQVLADEY-Q 184
Query: 197 HKIRVNSICPG 207
            ++RVN I PG
Sbjct: 185 QRLRVNCINPG 195

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 31/219 (14%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAM 74
           ++ + V +VTG +SGLG      L  AG ++V    R  D +  L D          RA 
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGD----------RAR 55
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE------EWNHI 128
               DV+ + AA+ +++  A E  G +  +VN AG   A++    L+ +       +  I
Sbjct: 56  FAAADVT-DEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRV---LSRDGVFSLAAFRKI 110
Query: 129 MKTNLTGSWLVSKYVCIRMR-------DANQEGSVINISSIAATSRGQLPGGVAYASSKA 181
           +  NL GS+ V +    R+        +A + G +IN +S+AA   GQ+ G  AY++SK 
Sbjct: 111 VDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD-GQI-GQAAYSASKG 168
Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK 220
           G+  MT  ++ +L  H+IRV +I PGLF + +   L ++
Sbjct: 169 GVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE 207

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           Q +    +V+G + GLG      L   G  +V A    ++ K+L DE+        RA  
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGN------RAEF 80
Query: 76  VELDVSANGAAIENSVQKAWEA---FGRID-ALVNNAGVSGAVK------SPLDLTEEEW 125
           V  +V++     E+SV  A EA    GR+  A+V + G   A +      SP D+    +
Sbjct: 81  VSTNVTS-----EDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGG--F 133
Query: 126 NHIMKTNLTGSWLVSKYVCIRM-----RDANQEGSVINISSIAATSRGQLPGGVAYASSK 180
              +   L G++ V++ V   +     R+  + G+++  +SIA    GQ+ G  AYA++K
Sbjct: 134 TKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY-EGQI-GQTAYAAAK 191
Query: 181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTD 240
           AG+  +T   + +L    IRVN+I PG  K+ I E + ++      A+  +P R  GT D
Sbjct: 192 AGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKR-LGTPD 250
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVD 266
                   +L+ +   Y++G +  +D
Sbjct: 251 E-FADAAAFLLTNG--YINGEVMRLD 273

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L++++++VTGAS G+GRE     A+ G  ++   R  ++L+ +   IN+++G   +   +
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L ++      +   Q+    + R+D +++NAG+ G V    +   + W  + + N+  +
Sbjct: 91  DL-LTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNAT 149
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +++ +   +  ++    V   SS+    R       AYA+SK       + L+ E   
Sbjct: 150 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW---GAYAASKFATEGXXQVLADEY-Q 205
Query: 197 HKIRVNSICPG 207
            ++RVN I PG
Sbjct: 206 QRLRVNCINPG 216

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           ++ +V +VTGAS G+GR   L L KAG  +    R +D L+ +  E     G  V    V
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCV---PV 59
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNN--AGVSGAV----KSPLDLTEEEWNHIMK 130
             D S          Q   E  GR+D LVNN  AGV   +    K+  +     W+ I  
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
             L G +  S Y    M  A Q G ++ ISS  +    Q    V Y   KA  + +    
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQ-GLIVVISSPGSL---QYMFNVPYGVGKAACDKLAADC 175
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKD 221
           + EL  H +   S+ PG+ ++E+ +  M K+
Sbjct: 176 AHELRRHGVSCVSLWPGIVQTELLKEHMAKE 206

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KVV+VTG +SG+G    + LA+     V  AR       L     +Q  ++   + V
Sbjct: 5   LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATY--LPV 62
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           EL    + A   ++V +    FGR+D LVNNAGV+  +   LD   + +   ++ NL   
Sbjct: 63  ELQ---DDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG--LDAGRDAFVASLERNLIHY 117
Query: 137 WLVSKYVCIRMRDANQEGSVINISS-IAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           + ++ Y C+    A + G+++NISS  A T +G   G   Y +SK    A+T+  ++ L 
Sbjct: 118 YAMAHY-CVPHLKATR-GAIVNISSKTAVTGQGNTSG---YCASKGAQLALTREWAVALR 172
Query: 196 VHKIRVNSICPG-----LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
            H +RVN++ P      L+++ I      +  L  +A++    R F T D    + V +L
Sbjct: 173 EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAV-FL 231
Query: 251 VHDSSEYVSGNIFIVDSGAT 270
           +   + + +G    VD G T
Sbjct: 232 LSPRASHTTGEWLFVDGGYT 251

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +   VTG ++G+G      L   GC++  A  R D +      +  + GS    M V+LD
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-GSGPEVMGVQLD 67
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-EEWNHIMKTNLTG--- 135
           V++     + +  +    FG +  L NNAGV+  +  P++ +  ++W+ ++  NL G   
Sbjct: 68  VASR-EGFKMAADEVEARFGPVSILCNNAGVN--LFQPIEESSYDDWDWLLGVNLHGVVN 124
Query: 136 --SWLVSKYVCIRMRDANQE-GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
             +  V + V  R++   Q+ G V+N +S+AA      PG   Y ++K  +  +++ L  
Sbjct: 125 GVTTFVPRMVE-RVKAGEQKGGHVVNTASMAAFLAAGSPG--IYNTTKFAVRGLSESLHY 181
Query: 193 ELGVHKIRVNSICPGLFKSEI 213
            L  ++I V+ +CPGL KS I
Sbjct: 182 SLLKYEIGVSVLCPGLVKSYI 202

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           + KV ++TGAS G+G      LA+ G  +   AR VDRL+ +  E+ ++ G  V      
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHH 58
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
           LDVS    ++E   +K  E FG +D +V NAG+ G  K   +L+EEE++ +++ NL G W
Sbjct: 59  LDVS-KAESVEEFSKKVLERFGDVDVVVANAGL-GYFKRLEELSEEEFHEMIEVNLLGVW 116
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
              K       D+ +    + + + +  S   +P G  Y S+K    A+ +   +E    
Sbjct: 117 RTLKAFL----DSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE--NP 170
Query: 198 KIRVNSICPG 207
            +R   + PG
Sbjct: 171 DVRFFELRPG 180

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 28/268 (10%)
Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINK-QSGSSVRAMAVELDV 80
           ++TG +  +G    + L + G R+V   R  +   + L  E+N  ++GS+V         
Sbjct: 15  VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 74
Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN--------HIMKTN 132
           S+     E+ +  ++ AFGR D LVNNA  S    +PL L  ++ N              
Sbjct: 75  SSLLDCCEDIIDCSFRAFGRCDVLVNNA--SAYYPTPL-LPGDDTNGAADAKPIDAQVAE 131
Query: 133 LTGSWLVSKYVCIRMRDANQ-EG--------SVINISSIAATSRGQLPGGVAYASSKAGL 183
           L GS  V+    IR     Q EG        SV+N+    A +   LPG   Y  +K  L
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD--AMTDLPLPGFCVYTMAKHAL 189
Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL 243
             +T+  +LEL    IRVN++ PGL    +    M ++       R  PL     +   +
Sbjct: 190 GGLTRAAALELAPRHIRVNAVAPGL---SLLPPAMPQETQEEY-RRKVPLGQSEASAAQI 245
Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGATL 271
              + +LV   + Y++G    VD G  L
Sbjct: 246 ADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L N++++VTGAS G+GRE  L  A+ G  ++   R  ++L+ +   I  +     +   +
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L ++           +    + R+D +++NAG+ G +    +   + W  + + N+  +
Sbjct: 73  DL-LTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNAT 131
Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +++ +   +  ++    V   SS+    R       AYA+SK       + L+ E   
Sbjct: 132 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW---GAYATSKFATEGXXQVLADEYQN 188
Query: 197 HKIRVNSICPG 207
             +RVN I PG
Sbjct: 189 RSLRVNCINPG 199

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D  V +V G +SG+G E               A++++   ++    ++Q+G         
Sbjct: 5   DKTVYVVLGGTSGIGAEL--------------AKQLESEHTIVHVASRQTG--------- 41
Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
           LD+S      E SV   +E  G  D L+  AG        +D+   +  +   T   G+ 
Sbjct: 42  LDISD-----EKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAV 96
Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L +K+     R   Q GS+   S +   SR  +      A+  A + A TK L+ EL   
Sbjct: 97  LAAKHGA---RYLKQGGSITLTSGM--LSRKVVANTYVKAAINAAIEATTKVLAKELA-- 149
Query: 198 KIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY 257
            IRVN+I PGL K+E  +G M  D  + +  RT      G    A    + YL    + Y
Sbjct: 150 PIRVNAISPGLTKTEAYKG-MNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSY 208
Query: 258 VSGNIFIVDSGATL 271
           ++G +  VD GA L
Sbjct: 209 MTGTVIDVDGGALL 222

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 30/269 (11%)
Query: 23  MVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINK-QSGSSVRAMAVELDV 80
           ++TG +  +G    + L + G R+V   R  +   + L  E+N  ++GS+V         
Sbjct: 15  VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 74
Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN-------- 132
           S+     E+ +  ++ AFGR D LVNNA  S    +PL L  ++ N              
Sbjct: 75  SSLLDCCEDIIDCSFRAFGRCDVLVNNA--SAYYPTPL-LPGDDTNGAADAKPIDAQVAE 131
Query: 133 LTGSWLVSKYVCIRMRDANQ-EG--------SVINISSIAATSRGQLPGGVAYASSKAGL 183
           L GS  V+    IR     Q EG        SV+N+    A +   LPG   Y  +K  L
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD--AXTDLPLPGFCVYTXAKHAL 189
Query: 184 NAMTKCLSLELGVHKIRVNSICPGL-FKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA 242
             +T+  +LEL    IRVN++ PGL           ++++      R  PL     +   
Sbjct: 190 GGLTRAAALELAPRHIRVNAVAPGLSLLPPAXPQETQEEY-----RRKVPLGQSEASAAQ 244
Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +   + +LV   + Y++G    VD G  L
Sbjct: 245 IADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  +V ++TG +SGLGR         G R+    +  +RL+ L      +      A+ 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL------EVAHGGNAVG 55
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV----SGAVKSPLDLTEEEWNHIMKT 131
           V  DV +     + + ++   AFG+ID L+ NAG+    +     P D  +  ++ I   
Sbjct: 56  VVGDVRSL-QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHV 114
Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           N+ G ++ +   C+    +++   V  IS+      G   GG  Y ++K  +  + + ++
Sbjct: 115 NVKG-YIHAVKACLPALVSSRGSVVFTISNAGFYPNG---GGPLYTATKHAVVGLVRQMA 170
Query: 192 LELGVHKIRVNSICPGLFKSEI 213
            EL  H +RVN + PG   +++
Sbjct: 171 FELAPH-VRVNGVAPGGMNTDL 191

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 33/260 (12%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL- 78
           K  +V G + G G      L + G  ++   R     +S    I ++ G  V A+  ++ 
Sbjct: 9   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGPRVHALRSDIA 64
Query: 79  ---DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLT 134
              +++  GAA       A +  G ID L  NAGVS     P D ++E  ++     N  
Sbjct: 65  DLNEIAVLGAA-------AGQTLGAIDLLHINAGVS--ELEPFDQVSEASYDRQFAVNTK 115
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++   + +   +R+    GS++  SS+A    G  PG   Y++SKA L +    L+ EL
Sbjct: 116 GAFFTVQRLTPLIREG---GSIVFTSSVA--DEGGHPGXSVYSASKAALVSFASVLAAEL 170
Query: 195 GVHKIRVNSICPGLFKSE------ITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
               IRVNS+ PG   +       ITE   ++     +     P +  GT D  +   V 
Sbjct: 171 LPRGIRVNSVSPGFIDTPTKGVAGITE--AERAEFKTLGDNITPXKRNGTADE-VARAVL 227
Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L  +++ + +G    VD G
Sbjct: 228 FLAFEAT-FTTGAKLAVDGG 246

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 33/260 (12%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL- 78
           K  +V G + G G      L + G  ++   R     +S    I ++ G  V A+  ++ 
Sbjct: 8   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGPRVHALRSDIA 63
Query: 79  ---DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLT 134
              +++  GAA       A +  G ID L  NAGVS     P D ++E  ++     N  
Sbjct: 64  DLNEIAVLGAA-------AGQTLGAIDLLHINAGVS--ELEPFDQVSEASYDRQFAVNTK 114
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++   + +   +R+    GS++  SS+A    G  PG   Y++SKA L +    L+ EL
Sbjct: 115 GAFFTVQRLTPLIREG---GSIVFTSSVA--DEGGHPGXSVYSASKAALVSFASVLAAEL 169
Query: 195 GVHKIRVNSICPGLFKSE------ITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
               IRVNS+ PG   +       ITE   ++     +     P +  GT D  +   V 
Sbjct: 170 LPRGIRVNSVSPGFIDTPTKGVAGITE--AERAEFKTLGDNITPXKRNGTADE-VARAVL 226
Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L  +++ + +G    VD G
Sbjct: 227 FLAFEAT-FTTGAKLAVDGG 245

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 41/270 (15%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K V VTGA  G+G    L   +AG ++                 ++         A 
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTG--------------FDQAFTQEQYPFAT 50
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNLT 134
           E+   A+ A +    Q+      R+DALVN AG+   GA      L++E+W      N+ 
Sbjct: 51  EVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQ---LSKEDWQQTFAVNVG 107
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           G++ + +    + R   + G+++ ++S AA T R    G  AY +SKA L ++   + LE
Sbjct: 108 GAFNLFQQTMNQFRR-QRGGAIVTVASDAAHTPR---IGMSAYGASKAALKSLALSVGLE 163
Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT------------DP 241
           L    +R N + PG   +++   L    W+++ A     +R FG                
Sbjct: 164 LAGSGVRCNVVSPGSTDTDMQRTL----WVSDDAEEQR-IRGFGEQFKLGIPLGKIARPQ 218
Query: 242 ALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            + + + +L  D + +++    +VD G+TL
Sbjct: 219 EIANTILFLASDLASHITLQDIVVDGGSTL 248

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 87  IENSVQKAWEAFGRIDALVNNAGVSGAVK-----SPLDLTEEEWNHIMKTNLTGSWLVSK 141
           +  +V +A E    + A+V+ AGV  A K      P  L  E +  +++ NL G++ V +
Sbjct: 54  VRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGL--ESFRRVLEVNLLGTFNVLR 110
Query: 142 YVCIRMRD-----ANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
                MR+       Q G ++N +S+AA   GQ+ G  AYA+SK G+ A+T   + EL  
Sbjct: 111 LAAWAMRENPPDAEGQRGVIVNTASVAAFE-GQI-GQAAYAASKGGVVALTLPAARELAG 168
Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR 234
             IRV ++ PGLF + + +GL +K   +  A   +P R
Sbjct: 169 WGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPR 206

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           QL  K  +VTG+++G+G+     L   G  ++   RR + +     EI  Q   ++    
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAI---- 62
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL-T 134
             L         E   Q   E + ++D L+NN G+   V+   D+ +E+W  + + N+ +
Sbjct: 63  --LQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEY-FDIPDEDWFKLFEVNIXS 119
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G  L   Y  ++     +EG VI I+S AA    Q      Y+++K    ++++ L+   
Sbjct: 120 GVRLTRSY--LKKXIERKEGRVIFIASEAAIXPSQ--EXAHYSATKTXQLSLSRSLAELT 175
Query: 195 GVHKIRVNSICPGLFKSEITEGL 217
               + VN+I PG   S +TEG+
Sbjct: 176 TGTNVTVNTIXPG---STLTEGV 195

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 10/258 (3%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K V++TG  SG+GR   +  AK G  I  A    +   +   +  ++ G  V+ + 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVL 101
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  D+S +    ++ VQ+     G ++ LVNN       +    +T E+     + N+  
Sbjct: 102 LPGDLS-DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS 160
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + V+K     ++  +    +IN +SI A    +    + Y+++K  + A T+ LS  L 
Sbjct: 161 YFHVTKAALSHLKQGD---VIINTASIVAYEGNET--LIDYSATKGAIVAFTRSLSQSLV 215
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN + PG   + +      +  ++   S   P++  G       + V YL    S
Sbjct: 216 QKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNV-PMQRPGQPYELAPAYV-YLASSDS 273
Query: 256 EYVSGNIFIVDSGATLPG 273
            YV+G +  V+ G  + G
Sbjct: 274 SYVTGQMIHVNGGVIVNG 291

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 75  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 124
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 125 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 180
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 181 RKEYSVSRVNVSITLCVLGLIDTE 204

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 82  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 131
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 132 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 187
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 188 RKEYSVSRVNVSITLCVLGLIDTE 211

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 67  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 116
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 117 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 172
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 173 RKEYSVSRVNVSITLCVLGLIDTE 196

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 72  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 121
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 122 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 177
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 178 RKEYSVSRVNVSITLCVLGLIDTE 201

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 86  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 135
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 136 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 191
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 192 RKEYSVSRVNVSITLCVLGLIDTE 215

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 89  TMEDMTFA------EQFVAQAGKLMGGLDMLILNH----ITNTSLNLFHDDIHHVRKSME 138
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 139 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 194
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 195 RKEYSVSRVNVSITLCVLGLIDTE 218

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 73  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 122
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 123 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 178
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 179 RKEYSVSRVNVSITLCVLGLIDTE 202

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 54/275 (19%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSV---- 71
           +L  KV +VTG +SG+G E    L   G ++               +IN+ +G  +    
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVA------------FSDINEAAGQQLAAEL 50
Query: 72  --RAMAVELDVS--ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE---EE 124
             R+M V  DVS  A+   +  +VQ+     G ++ LVNNAG    +  P D+     E+
Sbjct: 51  GERSMFVRHDVSSEADWTLVMAAVQR---RLGTLNVLVNNAG----ILLPGDMETGRLED 103
Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLN 184
           ++ ++K N    ++  +     M++    GS+IN++S+++    +   G  Y++SKA ++
Sbjct: 104 FSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAG--YSASKAAVS 159
Query: 185 AMTK--CLSLELGVHKIRVNSICPG-----LFKSEITEGLMKKDWLN----NVASRTY-P 232
           A+T+   LS     + IRVNSI P      + ++ + +G+ K+  L+    N A R Y P
Sbjct: 160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMP 219
Query: 233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDS 267
            R        +  LV +L  D S  +SG+    D+
Sbjct: 220 ER--------IAQLVLFLASDESSVMSGSELHADN 246

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 92  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 141
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 142 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPLVAAYSASKFALDGFFSSI 197
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 198 RKEYSVSRVNVSITLCVLGLIDTE 221

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 92  TMEDMTFA------EQFVAQAGKLMGGLDMLILN----HITNTSLNLFHDDIHHVRKSME 141
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 142 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPLVAAYSASKFALDGFFSSI 197
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 198 RKEYSVSRVNVSITLCVLGLIDTE 221

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 86  TMEDMTFA------EQFVAQAGKLMGGLDMLILNH----ITNTSLNLFHDDIHHVRKSME 135
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 136 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSI 191
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 192 RKEYSVSRVNVSITLCVLGLIDTE 215

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL-------CDEINKQSGSSVRAM 74
           V +TGAS G+G+   L  AK G  IV AA+       L        +EI    G   +A+
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG---KAL 104
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
              +DV  +   I  +V+KA + FG ID LVNNA    ++ + LD   +  + +M  N  
Sbjct: 105 PCIVDVR-DEQQISAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTR 162
Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++L SK  CI     ++   ++NIS     +        AY  +K G++     ++ E 
Sbjct: 163 GTYLASK-ACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF 221
Query: 195 GVHKIRVNSICP 206
              +I VN++ P
Sbjct: 222 K-GEIAVNALWP 232

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+   S   +  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A +  G +D L+ N        + L+L  ++ +H+   M+
Sbjct: 72  TMEDMTFA------EQFVAQAGKLMGGLDMLILNH----ITNTSLNLFHDDIHHVRKSME 121
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +
Sbjct: 122 VNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPLVAAYSASKFALDGFFSSI 177
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V ++ V+ ++C  GL  +E
Sbjct: 178 RKEYSVSRVNVSITLCVLGLIDTE 201

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVA--- 227
           P   AY  SK  +   TK L+L+L  ++IRVN++CPG   +++   L++K + NNV    
Sbjct: 135 PNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQK-YANNVGISF 193
Query: 228 -------SRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
                   + +PL         +  LV +L+ D S++ +G +  +D G T
Sbjct: 194 DEAQKQEEKEFPLNRIAQPQE-IAELVIFLLSDKSKFXTGGLIPIDGGYT 242

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 10/258 (3%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K V++TG  SG+GR   +  AK G  I  A    +   +   +  ++ G  V+ + 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVL 101
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  D+S +    ++ VQ+     G ++ LVNN       +    +T E+     + N+  
Sbjct: 102 LPGDLS-DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS 160
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + V+K     ++  +    +IN +SI A    +    + Y+++K  + A T+ LS  L 
Sbjct: 161 YFHVTKAALSHLKQGD---VIINTASIVAYEGNET--LIDYSATKGAIVAFTRSLSQSLV 215
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN + PG   + +      +  ++   S   P +  G       + V YL    S
Sbjct: 216 QKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNV-PXQRPGQPYELAPAYV-YLASSDS 273
Query: 256 EYVSGNIFIVDSGATLPG 273
            YV+G    V+ G  + G
Sbjct: 274 SYVTGQXIHVNGGVIVNG 291

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 98  FGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGS 155
            GR+D +VNNAGV   G +    + T+ +W+  +  N+   + + +   I +  A   G+
Sbjct: 92  LGRLDIVVNNAGVISRGRIT---ETTDADWSLSLGVNVEAPFRICR-AAIPLXAAAGGGA 147
Query: 156 VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE-IT 214
           ++N++S      G  PG   Y  +KA L ++T+C   +     IR+N++CP    +  + 
Sbjct: 148 IVNVASCWGLRPG--PGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLR 205
Query: 215 EGLMKKDWLNNVA----SRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
            G  K+ +  + A     RT PL      +  +  +V +L  D++ Y+ G++  V+ G
Sbjct: 206 TGFAKRGFDPDRAVAELGRTVPLGRIAEPED-IADVVLFLASDAARYLCGSLVEVNGG 262

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  + V++TG +SGLGR         G ++    +  +RL     E+    G +V    
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLA----ELETDHGDNV---- 53
Query: 76  VELDVSANGAAIENSVQKAWEA---FGRIDALVNNAGVSGAVKSPLDLTEEE----WNHI 128
             L +  +  ++E+  Q A      FG+ID L+ NAG+     + +DL EE     ++ +
Sbjct: 54  --LGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV 111
Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
              N+ G ++ +   C+    A++   +  IS+      G   GG  Y ++K  +  + +
Sbjct: 112 FHINVKG-YIHAVKACLPALVASRGNVIFTISNAGFYPNG---GGPLYTAAKHAIVGLVR 167
Query: 189 CLSLELGVHKIRVNSICPGLFKSEI 213
            L+ EL  + +RVN +  G   S++
Sbjct: 168 ELAFELAPY-VRVNGVGSGGINSDL 191

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           V +VTGA+  LGR     L   G  + +   R      +L   +N +  +S  A+ V+ D
Sbjct: 27  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS--AITVQAD 84
Query: 80  VS---------ANGAA-------IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
           +S         A+G+A           V   +  +GR D LVNNA  S    +PL   +E
Sbjct: 85  LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNA--SSFYPTPLLRNDE 142
Query: 124 EWNH-------IMKT---NLTGSWLVSKYVCIRM-------RDANQEG---SVINISSIA 163
           + +         M+T   +L GS  ++ Y  I+          A   G   S+IN+  + 
Sbjct: 143 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VD 200
Query: 164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL 223
           A +   L G   Y  +K  L  +T+  +LEL   +IRVN + PGL  S + + +    W 
Sbjct: 201 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWE 258
Query: 224 NNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            + +    PL    ++   ++ +V +L    ++Y++G    VD G +L
Sbjct: 259 GHRSK--VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 304

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           V +VTGA+  LGR     L   G  + +   R      +L   +N +  +S  A+ V+ D
Sbjct: 8   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS--AITVQAD 65
Query: 80  VS---------ANGAA-------IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
           +S         A+G+A           V   +  +GR D LVNNA  S    +PL   +E
Sbjct: 66  LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNA--SSFYPTPLLRNDE 123
Query: 124 EWNH-------IMKT---NLTGSWLVSKYVCIRM-------RDANQEG---SVINISSIA 163
           + +         M+T   +L GS  ++ Y  I+          A   G   S+IN+  + 
Sbjct: 124 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VD 181
Query: 164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL 223
           A +   L G   Y  +K  L  +T+  +LEL   +IRVN + PGL  S + + +    W 
Sbjct: 182 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWE 239
Query: 224 NNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            + +    PL    ++   ++ +V +L    ++Y++G    VD G +L
Sbjct: 240 GHRSK--VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 285

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           V +VTGA+  LGR     L   G  + +   R      +L   +N +  +S  A+ V+ D
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS--AITVQAD 105
Query: 80  VS---------ANGAA-------IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
           +S         A+G+A           V   +  +GR D LVNNA  S    +PL   +E
Sbjct: 106 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNA--SSFYPTPLLRNDE 163
Query: 124 EWNH-------IMKT---NLTGSWLVSKYVCIRM-------RDANQEG---SVINISSIA 163
           + +         M+T   +L GS  ++ Y  I+          A   G   S+IN+  + 
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VD 221
Query: 164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL 223
           A +   L G   Y  +K  L  +T+  +LEL   +IRVN + PGL  S + + +    W 
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWE 279
Query: 224 NNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            + +    PL    ++   ++ +V +L    ++Y++G    VD G +L
Sbjct: 280 GHRSK--VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           V +VTGA+  LGR     L   G  + +   R      +L   +N +  +S  A+ V+ D
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS--AITVQAD 68
Query: 80  VS---------ANGAA-------IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
           +S         A+G+A           V   +  +GR D LVNNA  S    +PL   +E
Sbjct: 69  LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNA--SSFYPTPLLRNDE 126
Query: 124 EWNH-------IMKT---NLTGSWLVSKYVCIRM-------RDANQEG---SVINISSIA 163
           + +         M+T   +L GS  ++ Y  I+          A   G   S+IN+  + 
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM--VD 184
Query: 164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL 223
           A +   L G   Y  +K  L  +T+  +LEL   +IRVN + PGL  S + + +    W 
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWE 242
Query: 224 NNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
            + +    PL    ++   ++ +V +L    ++Y++G    VD G +L
Sbjct: 243 GHRSK--VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    L+K G  +V  AR  + L+   S C E+   S   +  
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN---HIMK 130
              ++  +      E  + KA +  G +D L+ N       ++ L L  ++ +    +M+
Sbjct: 67  TMEDMTFA------EQFIVKAGKLMGGLDMLILNH----ITQTSLSLFHDDIHSVRRVME 116
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     ++S      ++ +N  GS+  ISS+A   +   P    Y++SK  L+     +
Sbjct: 117 VNFLSYVVMSTAALPMLKQSN--GSIAVISSLAG--KVTYPMVAPYSASKFALDGFFSTI 172
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             EL + K+ V+ ++C  GL  +E
Sbjct: 173 RTELYITKVNVSITLCVLGLIDTE 196

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 30/251 (11%)
Query: 31  LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS 90
           LGR     +   G    AA   V  LK L            + +A++ D+S     +   
Sbjct: 41  LGRRGASVVVNYGSSSKAAEEVVAELKKL----------GAQGVAIQADISKPSEVVA-L 89
Query: 91  VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA 150
             KA   FG +D +++N+G+       L++T+E ++ +   N  G + V++     ++  
Sbjct: 90  FDKAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQ---GLKHC 145
Query: 151 NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK 210
            + G +I  SSIAA   G +P    YA SKA +    +  +++ G   + VN I PG  K
Sbjct: 146 RRGGRIILTSSIAAVMTG-IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 204
Query: 211 SEITE-----------GLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHDSSEYV 258
           +++ +             M ++ ++   +   PL+  G   PA +   V  L  + SE++
Sbjct: 205 TDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGY--PADIGRAVSALCQEESEWI 262
Query: 259 SGNIFIVDSGA 269
           +G +  +  G 
Sbjct: 263 NGQVIKLTGGG 273

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           +E W    +++ +VTGAS G+G      L + G ++V  AR V  ++ L  E  K +G  
Sbjct: 27  MERW---RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAEC-KSAGYP 82
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
              +    D+S N   I +           +D  +NNAG++    + L  +   W  +  
Sbjct: 83  GTLIPYRCDLS-NEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFN 140
Query: 131 TNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
            N+    + ++     M++ N  +G +INI+S++      L     Y+++K  + A+T+ 
Sbjct: 141 VNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEG 200
Query: 190 LSLEL--GVHKIRVNSICPGLFKSEITEGLMKKD 221
           L  EL      IR   I PG+ +++    L  KD
Sbjct: 201 LRQELREAQTHIRATCISPGVVETQFAFKLHDKD 234

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            D +  +VTG +SG+G     + A+ G R+V +   VD+  +L   +N   G    A  V
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLS--DVDQ-PALEQAVNGLRGQGFDAHGV 85
Query: 77  ELDVSANGAAIENSVQKAWEAF---GRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTN 132
             DV      ++  V+ A EAF   G +D + +NAG+   V  PL  +  ++W  ++  +
Sbjct: 86  VCDVR----HLDEMVRLADEAFRLLGGVDVVFSNAGI--VVAGPLAQMNHDDWRWVIDID 139
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP--GGVAYASSKAGLNAMTKCL 190
           L GS    +    R+ +    G +   +S A    G +P  G   Y  +K G+  + + L
Sbjct: 140 LWGSIHAVEAFLPRLLEQGTGGHIAFTASFA----GLVPNAGLGTYGVAKYGVVGLAETL 195
Query: 191 SLELGVHKIRVNSICPGLFKSEI 213
           + E+  + I V+ +CP + ++++
Sbjct: 196 AREVKPNGIGVSVLCPMVVETKL 218

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 32/203 (15%)
Query: 91  VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI-----------MKTNLTGSWLV 139
           V   +  +GR D LVNNA  S    +PL L ++E  H+              +L GS  +
Sbjct: 93  VAACYTHWGRCDVLVNNA--SSFYPTPL-LRKDEDGHVPCVGDREAMEAAAADLFGSNAM 149
Query: 140 SKYVCI-----RMRD--ANQEG---SVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           + Y  I     R+ D  A Q G   S++N+  + A +   L G   Y  +K  L  +T+ 
Sbjct: 150 APYFLIKAFAHRVADTPAEQRGTNYSIVNM--VDAMTSQPLLGYTIYTMAKGALEGLTRS 207
Query: 190 LSLELGVHKIRVNSICPGL-FKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
            +LEL   +IRVN + PGL   ++     +++D+ + V     PL    ++   ++ +V 
Sbjct: 208 AALELAPLQIRVNGVGPGLSVLADDMPPAVREDYRSKV-----PLYQRDSSAAEVSDVVI 262
Query: 249 YLVHDSSEYVSGNIFIVDSGATL 271
           +L    ++YV+G    VD G +L
Sbjct: 263 FLCSSKAKYVTGTCVKVDGGYSL 285

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    L+K G  +V  AR  + L+   S C E+   S   +  
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN---HIMK 130
              ++  +      E  + KA +  G +D L+ N       ++ L L  ++ +    +M+
Sbjct: 76  TMEDMTFA------EQFIVKAGKLMGGLDMLILNH----ITQTSLSLFHDDIHSVRRVME 125
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N     ++S      ++ +N  GS+  ISS+A   +   P    Y++SK  L+     +
Sbjct: 126 VNFLSYVVMSTAALPMLKQSN--GSIAVISSLAG--KMTQPMIAPYSASKFALDGFFSTI 181
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             EL + K+ V+ ++C  GL  +E
Sbjct: 182 RTELYITKVNVSITLCVLGLIDTE 205

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 34/204 (16%)
Query: 91  VQKAWEAFGRIDALVNNAGVSGAVKSPL----------DLTEEEWNHIMKTNLTGSWLVS 140
           V   +  +GR D LVNNA  S    +PL           + ++E   +   +L GS  ++
Sbjct: 94  VDACYMHWGRCDVLVNNA--SSFYPTPLLRKDAGEGGSSVGDKESLEVAAADLFGSNAIA 151
Query: 141 KYVCI-----RMRD--ANQEG---SVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            Y  I     R+ D  A Q G   S++N+  + A +   L G   Y  +K  L  +T+  
Sbjct: 152 PYFLIKAFAQRVADTRAEQRGTSYSIVNM--VDAMTSQPLLGYTMYTMAKEALEGLTRSA 209
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           +LEL   +IRVN + PGL  S + + +   +++D+      R  PL    ++   ++ +V
Sbjct: 210 ALELASLQIRVNGVSPGL--SVLPDDMPFSVQEDY-----RRKVPLYQRNSSAEEVSDVV 262
Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            +L    ++Y++G    VD G +L
Sbjct: 263 IFLCSPKAKYITGTCIKVDGGYSL 286

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 33/272 (12%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI-NKQSGSSVRAMA 75
           +  K+ +VT  SSGLG    L+LA+ G R++  +R  ++L++    I +  SG+ V  +A
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            ++    +   I+   +KA +  G  D LV + G     +  ++L  E+W+   +     
Sbjct: 65  GDIREPGD---IDRLFEKARD-LGGADILVYSTGGPRPGRF-MELGVEDWDESYRL---- 115
Query: 136 SWLVSKYVCIRMRDANQE-----GSVINISSIAATSRGQLPGGVAYAS-SKAGLNAMTKC 189
             L    V +  R A Q      G ++ I S+      Q    +A ++  +  +  + + 
Sbjct: 116 --LARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ---DLALSNIMRLPVIGVVRT 170
Query: 190 LSLELGVHKIRVNSICPGLFKSEITE----------GLMKKDWLNNVASRTYPLRDFGTT 239
           L+LEL  H + VN++ P L  ++             G+  ++ L ++ASR  P+   G  
Sbjct: 171 LALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI-PMGRVGKP 229
Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +  L S+V +L  + + +++G +  VD GA +
Sbjct: 230 E-ELASVVAFLASEKASFITGAVIPVDGGAHI 260

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K+ +VTGA+ G+G E   DL++    + A  R  + L +L  EI            +
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHI-VYALGRNPEHLAALA-EIEG-------VEPI 53
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE-----EWNHIMKT 131
           E D+      +E       +    +D LV+ A V+       D T E     EW+  +  
Sbjct: 54  ESDIVKE--VLEEGGVDKLKNLDHVDTLVHAAAVA------RDTTIEAGSVAEWHAHLDL 105
Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           N+     +S+ +   +R A+  G VI I+S A    G  PG   YA+SK  L  +     
Sbjct: 106 NVIVPAELSRQLLPALRAAS--GCVIYINSGAGN--GPHPGNTIYAASKHALRGLADAFR 161
Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLN 224
            E   + IRV+++ PG   + + +GLM     N
Sbjct: 162 KEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTN 194

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 18/268 (6%)
Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           ++P+  L   V +VTG SSG+G      L +AG  +   AR  +RL++  +   +Q    
Sbjct: 1   MKPY-DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRA-AESALRQRFPG 58
Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            R  A   DV  +   +    +      G    LVNNAG  G V +  + T+E W+  ++
Sbjct: 59  ARLFASVCDV-LDALQVRAFAEACERTLGCASILVNNAG-QGRVSTFAETTDEAWSEELQ 116
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
                S +      +   ++  + +++ ++S+ A+     P  VA ++++AG+  + + +
Sbjct: 117 LKFF-SVIHPVRAFLPQLESRADAAIVCVNSLLASQ--PEPHMVATSAARAGVKNLVRSM 173
Query: 191 SLELGVHKIRVNSICPGLFKS------EITEGLMKKDWLNNVA----SRTYPLRDFGTTD 240
           + E     +RVN I  GL +S             + DW    A    ++  PL   G   
Sbjct: 174 AFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPI 233
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSG 268
            A  +++ +L    S Y +G+   V  G
Sbjct: 234 EAARAIL-FLASPLSAYTTGSHIDVSGG 260

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 9   LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIV---AAARRVDRLKSLCDEINK 65
           + L  +  L NKV+++ G    LG       A     +V     A+  D    L DE+  
Sbjct: 1   MSLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED 60
Query: 66  QSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEE 124
           Q G+ V     +L   +N   +      A + FG++D  +N  G    +K P+ + +E E
Sbjct: 61  Q-GAKVALYQSDL---SNEEEVAKLFDFAEKEFGKVDIAINTVG--KVLKKPIVETSEAE 114
Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI-SSIAATSRGQLPGGVAYASSKAGL 183
           ++ +   N   ++   K     M   N  G +I I +S+ A   G       YA +KA +
Sbjct: 115 FDAMDTINNKVAYFFIKQAAKHM---NPNGHIITIATSLLAAYTGFYS---TYAGNKAPV 168
Query: 184 NAMTKCLSLELGVHKIRVNSICPG 207
              T+  S EL   +I VN+I PG
Sbjct: 169 EHYTRAASKELMKQQISVNAIAPG 192

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL---CDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   C E+   S   +  
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A    G +D L+ N      + + L     E +++   M+
Sbjct: 90  SMEDMTFA------EEFVAEAGNLMGGLDMLILNH----VLYNRLTFFHGEIDNVRKSME 139
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N   S++V     + M   +Q GS+  +SS+A   +   P    Y++SK  L+     L
Sbjct: 140 VNFH-SFVVLSVAAMPMLMQSQ-GSIAVVSSVAG--KITYPLIAPYSASKFALDGFFSTL 195
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V+K+ V+ ++C  GL  +E
Sbjct: 196 RSEFLVNKVNVSITLCILGLIDTE 219

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL---CDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   C E+   S   +  
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A    G +D L+ N      + + L     E +++   M+
Sbjct: 67  SMEDMTFA------EEFVAEAGNLMGGLDMLILNH----VLYNRLTFFHGEIDNVRKSME 116
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N   S++V     + M   +Q GS+  +SS+A   +   P    Y++SK  L+     L
Sbjct: 117 VNFH-SFVVLSVAAMPMLMQSQ-GSIAVVSSVAG--KITYPLIAPYSASKFALDGFFSTL 172
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V+K+ V+ ++C  GL  +E
Sbjct: 173 RSEFLVNKVNVSITLCILGLIDTE 196

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL---CDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   C E+   S   +  
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A    G +D L+ N      + + L     E +++   M+
Sbjct: 69  SMEDMTFA------EEFVAEAGNLMGGLDMLILNH----VLYNRLTFFHGEIDNVRKSME 118
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N   S++V     + M   +Q GS+  +SS+A   +   P    Y++SK  L+     L
Sbjct: 119 VNFH-SFVVLSVAAMPMLMQSQ-GSIAVVSSVAG--KITYPLIAPYSASKFALDGFFSTL 174
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V+K+ V+ ++C  GL  +E
Sbjct: 175 RSEFLVNKVNVSITLCILGLIDTE 198

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL---CDEINKQSGSSVRA 73
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   C E+   S   +  
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI---MK 130
              ++  +      E  V +A    G +D L+ N      + + L     E +++   M+
Sbjct: 69  SMEDMTFA------EEFVAEAGNLMGGLDMLILNH----VLYNRLTFFHGEIDNVRKSME 118
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            N   S++V     + M   +Q GS+  +SS+A   +   P    Y++SK  L+     L
Sbjct: 119 VNFH-SFVVLSVAAMPMLMQSQ-GSIAVVSSVAG--KITYPLIAPYSASKFALDGFFSTL 174
Query: 191 SLELGVHKIRVN-SICP-GLFKSE 212
             E  V+K+ V+ ++C  GL  +E
Sbjct: 175 RSEFLVNKVNVSITLCILGLIDTE 198

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 13/224 (5%)
Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA 113
           D LK   + + ++ G+ V       D ++  A  E +++K W   G++D LV+  G S  
Sbjct: 67  DALKKRVEPLAEELGAFVAGHCDVADAASIDAVFE-TLEKKW---GKLDFLVHAIGFSDK 122
Query: 114 ---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL 170
                  +D +E  + + M  ++     VS+     M D    GS++ ++   A     +
Sbjct: 123 DELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG---GSILTLTYYGAEK--VM 177
Query: 171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT 230
           P       +KA L A  K L+++LG   IRVN+I  G  K+    G+    ++       
Sbjct: 178 PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYN 237
Query: 231 YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
            PLR   T D  +  +  Y + D S  V+G +   DSG  + G+
Sbjct: 238 APLRRTVTIDE-VGDVGLYFLSDLSRSVTGEVHHADSGYHVIGM 280

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 120/296 (40%), Gaps = 57/296 (19%)
Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN----------- 64
           ++ +KVV+VTG + G GR   + LA+ G  I+        L  +C +I            
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADII--------LFDICHDIETNEYPLATSRD 58
Query: 65  -KQSGSSV-----RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL 118
            +++G  V     +A   E+DV  + AA+   +  A   FG++D +V NAG+      PL
Sbjct: 59  LEEAGLEVEKTGRKAYTAEVDVR-DRAAVSRELANAVAEFGKLDVVVANAGI-----CPL 112
Query: 119 --DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA---------TSR 167
              L  + +      +  G   V   V   +       S+I   S+A             
Sbjct: 113 GAHLPVQAFADAFDVDFVG---VINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGG 169
Query: 168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE-ITEGLMKKDWLNNV 226
            Q PGG  Y+ +K  +++ T  L+ +L    IR N I P    ++ +    M + +  ++
Sbjct: 170 PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDL 229
Query: 227 --ASRTYPLRDFGTTDPALTSLVR---------YLVHDSSEYVSGNIFIVDSGATL 271
              SR   L  F       T  V          +L  D S YV+G  F VD+GA L
Sbjct: 230 EAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 97  AFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGS 155
           A G +D LV+N  ++     P+D    E++  +++      + ++  V  +M+   + G 
Sbjct: 69  ALGHVDILVSN-DIAPVEWRPIDKYAVEDYRDMVEALQIKPFALANAVASQMKR-RKSGH 126
Query: 156 VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICP-GLFKSEIT 214
           +I I+S  A S G       YAS++AG +A+   LS ELG H I V +I P G+   +  
Sbjct: 127 IIFITS--AASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAIAPNGVDSGDSP 184
Query: 215 EGLMKKDWLNNVAS----RTY-PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA 269
                + W  +       R Y  L+  GT    L  LV +L   S +Y++G +F +  G 
Sbjct: 185 YYYPSEPWKTSPEHVAWVRKYTALQRLGTQK-ELGELVTFLASGSCDYLTGQVFWLAGGF 243
Query: 270 TL----PGLP 275
            +    PG+P
Sbjct: 244 PVVERWPGMP 253

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           +  L  K V++TG+S G+G       A+AG ++    R+     +  DE      +    
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKA---PANIDETIASMRADGGD 58
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV-KSPL-DLTEEEWNHIMKT 131
            A      A   A +  V +    FG ID L+NNAG  G V + PL ++ +  ++ +M  
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAG--GLVGRKPLPEIDDTFYDAVMDA 116
Query: 132 NLTGSWLVSKYVCIRM----RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
           N+    + +K+    +    + + Q  +VI+  SIA  +    PG   Y ++KA L+ + 
Sbjct: 117 NIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-GGPGAGLYGAAKAFLHNVH 175
Query: 188 KCLSLELGVHKIRVNSICPGL----FKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL 243
           K          +R N + PG     F ++ T+ +  +D ++N      P+  FGT +   
Sbjct: 176 KNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDV--RDRISN----GIPMGRFGTAEEMA 229
Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSG 268
            + + +  H +S Y++G +  ++ G
Sbjct: 230 PAFLFFASHLASGYITGQVLDINGG 254

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 8/214 (3%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V++VTGA+ G+G       A  G  +V   R    L  + D+I          +A+
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTG 135
            L+ +A          +    FGR+D L++NA + G  ++PL+ L +E++  +   N+  
Sbjct: 72  NLE-NATAQQYRELAARVEHEFGRLDGLLHNASIIGP-RTPLEQLPDEDFXQVXHVNVNA 129
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL- 194
           ++ +++ +   ++ +  E + I  +S +   +G+   G AY  SK     + + L+ EL 
Sbjct: 130 TFXLTRALLPLLKRS--EDASIAFTSSSVGRKGRANWG-AYGVSKFATEGLXQTLADELE 186
Query: 195 GVHKIRVNSICPGLFKSEI-TEGLMKKDWLNNVA 227
           GV  +R NSI PG  ++    +    ++ LNN A
Sbjct: 187 GVTAVRANSINPGATRTGXRAQAYPDENPLNNPA 220

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
           SA+  A+ N+++K W   G++D LV+  G S   K  L      +  I ++N   +  +S
Sbjct: 76  SASIDAVFNTIEKKW---GKLDFLVHAIGFSD--KEEL---SGRYVDISESNFXXTXNIS 127
Query: 141 KYVCIRMRDANQE-----GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            Y    +    ++     GS++ ++   A     +P       +KA L A  K L+++LG
Sbjct: 128 VYSLTALTKRAEKLXSDGGSILTLTYYGAEK--VVPNYNVXGVAKAALEASVKYLAVDLG 185
Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN+I  G  K+    G+    ++        PLR   T +    S + YL+ D S
Sbjct: 186 PKHIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSAL-YLLSDLS 244
Query: 256 EYVSGNIFIVDSGATLPG 273
             V+G +  VDSG  + G
Sbjct: 245 RSVTGEVHHVDSGYNIIG 262

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 30/207 (14%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA--- 75
            K++++TGASSG GR     LA AG R+ A+ R          +I  ++ S+V A+A   
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYASXR----------DIVGRNASNVEAIAGFA 54
Query: 76  ---------VELDVSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEE 124
                    +ELDV +   +++ ++ +     GRID L++NAG  V G  ++    T E+
Sbjct: 55  RDNDVDLRTLELDVQSQ-VSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEA---FTPEQ 110
Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLN 184
           +  +   N+  +  V++      R   + G +I ISS ++   G  P    Y ++KA  +
Sbjct: 111 FAELYDINVLSTQRVNRAALPHXR-RQKHGLLIWISSSSSAG-GTPPYLAPYFAAKAAXD 168
Query: 185 AMTKCLSLELGVHKIRVNSICPGLFKS 211
           A+    + EL    I  + I PG F S
Sbjct: 169 AIAVQYARELSRWGIETSIIVPGAFTS 195

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 112/268 (41%), Gaps = 60/268 (22%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCR-----IVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           V +VTG + G+G     DL    CR     +V  AR V R ++   ++  + G S R   
Sbjct: 6   VALVTGGNKGIGLAIVRDL----CRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQ 60
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI-----MK 130
           +++D   +  A+ + ++K    +G +D LVNNAG++  V  P         HI     MK
Sbjct: 61  LDIDDLQSIRALRDFLRKE---YGGLDVLVNNAGIAFKVADPTPF------HIQAEVTMK 111
Query: 131 TNLTGSWLVSKYVCIRMRD-ANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           TN  G    ++ VC  +      +G V+N+SSI +                  + A+  C
Sbjct: 112 TNFFG----TRDVCTELLPLIKPQGRVVNVSSIMS------------------VRALKSC 149
Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNVASRT-YPLRDFGTTDPALTS 245
            S EL   K R  +I       E   GLM K   D    V  +  +P   +G T   +T 
Sbjct: 150 -SPELQ-QKFRSETIT-----EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTV 202
Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATLPG 273
           L R      SE   G+  +++  A  PG
Sbjct: 203 LSRIHARKLSEQRKGDKILLN--ACCPG 228

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 97  AFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGS 155
           A+G++D LV+N  +      P+D    E++   ++      + +   V  +M+   + G 
Sbjct: 69  AYGQVDVLVSN-DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK-RKSGH 126
Query: 156 VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE 215
           +I I+S  AT  G       Y S++AG   +   LS ELG + I V +I P    SE + 
Sbjct: 127 IIFITS--ATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSP 184
Query: 216 GLMKKD-WLNNV-----ASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA 269
                + W  N        +   L+  GT    L  LV +L   S +Y++G +F +  G 
Sbjct: 185 YFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASGSCDYLTGQVFWLAGGF 243
Query: 270 TL----PGLP 275
            +    PG+P
Sbjct: 244 PMIERWPGMP 253

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 56/261 (21%)
Query: 21  VVMVTGASSGLGREFCLDLAKAGCR-----IVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           V +VTG + G+G     DL    CR     +V  AR V R ++   ++  + G S R   
Sbjct: 6   VALVTGGNKGIGLAIVRDL----CRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQ 60
Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI-----MK 130
           +++D   +  A+ + ++K    +G +D LVNNAG++  V  P         HI     MK
Sbjct: 61  LDIDDLQSIRALRDFLRKE---YGGLDVLVNNAGIAFKVADPTPF------HIQAEVTMK 111
Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TN  G+  V   +   ++    +G V+N+SSI +                  + A+  C 
Sbjct: 112 TNFFGTRDVXTELLPLIKP---QGRVVNVSSIMS------------------VRALKSC- 149
Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKK---DWLNNVASRT-YPLRDFGTTDPALTSL 246
           S EL   K R  +I       E   GLM K   D    V  +  +P   +G T   +T L
Sbjct: 150 SPELQ-QKFRSETIT-----EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVL 203
Query: 247 VRYLVHDSSEYVSGNIFIVDS 267
            R      SE   G+  ++++
Sbjct: 204 SRIHARKLSEQRKGDKILLNA 224

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 20  KVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           KV++VTG S G+G+      F LD       +   AR    LK L ++         R  
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLD---KDTVVYGVARSEAPLKKLKEKYGD------RFF 53
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
            V  D++ + + ++  V  A +  G+ID+LV NAGV   V++  ++    W  +   N  
Sbjct: 54  YVVGDITED-SVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF- 111
Query: 135 GSWLVSKYVCIRMRDANQ-EGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
             + +   V I + +  +  G+V+ +SS A        G  AY SSKA LN     L+ E
Sbjct: 112 --FSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWG--AYGSSKAALNHFAMTLANE 167
Query: 194 LGVHKIRVNSICPGLFKSEI 213
               +++  ++ PG+  +++
Sbjct: 168 --ERQVKAIAVAPGIVDTDM 185

>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 22  VMVTGASSGLGREFC---LDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +++TG + GLG       L+L +    +    R  ++ K L D     S  ++  + ++L
Sbjct: 24  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS--NIHILEIDL 81
Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
                   +   ++   +  G ++ L NNAG++        +  +E    ++TN      
Sbjct: 82  RNFDAYDKLVADIEGVTKDQG-LNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIX 140
Query: 139 VSKYVCIRMRDANQ----------EGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMT 187
           ++K     ++ A +            ++IN SSI  + +G   GG  AY +SK+ LNA T
Sbjct: 141 LAKACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYRTSKSALNAAT 200
Query: 188 KCLSLELGVHKIRVNSICPGLFKSE 212
           K LS++L   +I   S+ PG  K++
Sbjct: 201 KSLSVDLYPQRIXCVSLHPGWVKTD 225

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 10  DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS 69
           DL  + Q   + V++TGA+SGLG     +LA+ G  ++ A R             ++  +
Sbjct: 10  DLPSFAQ---RTVVITGANSGLGAVTARELARRGATVIMAVRD-----------TRKGEA 55
Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
           + R MA +++V        +SV++  +     D L+NNAG+   +  P  LT + +   +
Sbjct: 56  AARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGI---MAVPYALTVDGFESQI 112
Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA 163
            TN  G + ++  +  R+ D      V+ +SS+A
Sbjct: 113 GTNHLGHFALTNLLLPRLTD-----RVVTVSSMA 141

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIV---AAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           ++V++TGA  G+GR    + AK   ++V        ++   + C    K  G+ V    V
Sbjct: 32  EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC----KGLGAKVHTFVV 87
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE-EWNHIMKTNLTG 135
           +    +N   I +S +K     G +  LVNNAGV     S L  T++ +     + N+  
Sbjct: 88  D---CSNREDIYSSAKKVKAEIGDVSILVNNAGV--VYTSDLFATQDPQIEKTFEVNVLA 142
Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +  +K     M   N  G ++ ++S  A     +P  +AY SSK       K L+ EL 
Sbjct: 143 HFWTTKAFLPAMTK-NNHGHIVTVAS--AAGHVSVPFLLAYCSSKFAAVGFHKTLTDELA 199
Query: 196 VHKI---RVNSICPGL 208
             +I   +   +CP  
Sbjct: 200 ALQITGVKTTCLCPNF 215

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 7/194 (3%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSV----R 72
           L  K + +TGAS G+G    L  A+ G  +  AA+       L   I+  + +      +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
            +A++ D+      +  +V    + FG ID LVNNA     ++  LD   + ++   + N
Sbjct: 64  GLALKCDIREED-QVRAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPXKRFDLXQQVN 121
Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
             GS++ ++     +  A     ++ ++   + +         Y  +K G + +T  L+ 
Sbjct: 122 ARGSFVCAQACLPHLLQAPNP-HILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAA 180
Query: 193 ELGVHKIRVNSICP 206
           E G   + +N++ P
Sbjct: 181 EFGPQGVAINALWP 194

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +  +VTG + G+G E C  L+  G  +V   R V +     +++   +  +V  +  +LD
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENV--VFHQLD 70
Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSG 112
           V+   A + +        FG++D LVNNAGV+G
Sbjct: 71  VTDPIATMSSLADFIKTHFGKLDILVNNAGVAG 103

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL 217
           G AY +SKA LNA T+ L+ +  + K +VN +CPGL K+E+  G+
Sbjct: 233 GAAYTTSKACLNAYTRVLANK--IPKFQVNCVCPGLVKTEMNYGI 275

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K ++VTG +S L   + +  A  + G  + A   + D+LK   +E   Q GS +   
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDI--- 59
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW-NHIMKTNL 133
            ++ DV A  A+I+    +  + + + D  V++ G +     P D  + ++ N + +   
Sbjct: 60  VLQCDV-AEDASIDTMFAELGKVWPKFDGFVHSIGFA-----PGDQLDGDYVNAVTREGF 113
Query: 134 TGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
             +  +S Y  + M  A     N   +++ +S + A     +P       +KA L A  +
Sbjct: 114 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER--AIPNYNVMGLAKASLEANVR 171
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLRDFGTTD 240
            ++  +G   +RVN+I  G  ++    G+  KD+   +A         RT  + D G + 
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPIRRTVTIEDVGNS- 228
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
                   +L  D S  +SG +  VD G ++  +
Sbjct: 229 ------AAFLCSDLSAGISGEVVHVDGGFSIAAM 256

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K ++VTG +S L   + +  A  + G  + A   + D+LK   +E   Q GS +   
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDI--- 62
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW-NHIMKTNL 133
            ++ DV A  A+I+    +  + + + D  V++ G +     P D  + ++ N + +   
Sbjct: 63  VLQCDV-AEDASIDTMFAELGKVWPKFDGFVHSIGFA-----PGDQLDGDYVNAVTREGF 116
Query: 134 TGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
             +  +S Y  + M  A     N   +++ +S + A     +P       +KA L A  +
Sbjct: 117 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER--AIPNYNVMGLAKASLEANVR 174
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLRDFGTTD 240
            ++  +G   +RVN+I  G  ++    G+  KD+   +A         RT  + D G + 
Sbjct: 175 YMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPIRRTVTIEDVGNS- 231
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
                   +L  D S  +SG +  VD G ++  +
Sbjct: 232 ------AAFLCSDLSAGISGEVVHVDGGFSIAAM 259

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K ++VTG +S L   + +  A  + G  + A   + D+LK   +E   Q GS +   
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDI--- 58
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW-NHIMKTNL 133
            ++ DV A  A+I+    +  + + + D  V++ G +     P D  + ++ N + +   
Sbjct: 59  VLQCDV-AEDASIDTMFAELGKVWPKFDGFVHSIGFA-----PGDQLDGDYVNAVTREGF 112
Query: 134 TGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
             +  +S Y  + M  A     N   +++ +S + A     +P       +KA L A  +
Sbjct: 113 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER--AIPNYNVMGLAKASLEANVR 170
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLRDFGTTD 240
            ++  +G   +RVN+I  G  ++    G+  KD+   +A         RT  + D G + 
Sbjct: 171 YMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPIRRTVTIEDVGNS- 227
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
                   +L  D S  +SG +  VD G ++  +
Sbjct: 228 ------AAFLCSDLSAGISGEVVHVDGGFSIAAM 255

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 20/269 (7%)
Query: 15  CQLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVR 72
             L  K  +V G ++   LG      L +AG   VA + + +RL+   +++ +  G    
Sbjct: 4   VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGG--- 59
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+    DV+ +   ++       EAFG +D LV+    +     P +  E  +    + +
Sbjct: 60  ALLFRADVTQD-EELDALFAGVKEAFGGLDYLVHAIAFA-----PREAMEGRYIDTRRQD 113
Query: 133 LTGSWLVSKYVCIRM-RDAN----QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
              +  VS Y  + + R A     + G ++ ++  A  S   +P     A +KA L A  
Sbjct: 114 WLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYA--SEKVVPKYNVMAIAKAALEASV 171
Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           + L+ ELG   +RVN+I  G  ++     +     + +  ++T PLR    T   + +L 
Sbjct: 172 RYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR-NITQEEVGNLG 230
Query: 248 RYLVHDSSEYVSGNIFIVDSGATLPGLPI 276
            +L+   +  ++G +  VD+G  + G+ +
Sbjct: 231 LFLLSPLASGITGEVVYVDAGYHIMGMEL 259

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 90  SVQKAWEA----FGRIDALVNNAGVSGAVKSPLDLTEEE--WNHIMKTNLTGSWLVSKYV 143
           +VQ+A E     FG ID LV++ G    V  PL  T  +     I  ++ +   L+S ++
Sbjct: 104 TVQEAAECVRQDFGSIDILVHSLGNGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 163
Query: 144 CIRMRDANQEGSVINISSIAATSRGQLPG-GVAYASSKAGLNAMTKCLSLELGVHK-IRV 201
            I     N  G+ I+++ IA  S   +PG G   +S+KA L + T+ L+ E G  + IRV
Sbjct: 164 PIM----NPGGASISLTYIA--SERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRV 217
Query: 202 NSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGN 261
           N+I  G   S   + +   D +   +    P++   T D  + +   +LV   +  ++G 
Sbjct: 218 NTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGA 276
Query: 262 IFIVDSGATLPGL----PIF 277
              VD+G    G+    P+F
Sbjct: 277 TIYVDNGLNSMGVALDSPVF 296

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K ++VTG +S L   + +  A  + G  + A   + D+LK   +E   Q GS +   
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDI--- 59
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW-NHIMKTNL 133
            ++ DV A  A+I+    +  + + + D  V++      V +P D  + ++ N + +   
Sbjct: 60  VLQCDV-AEDASIDTMFAELGKVWPKFDGFVHSI-----VFAPGDQLDGDYVNAVTREGF 113
Query: 134 TGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
             +  +S Y  + M  A     N   +++ +S + A     +P       +KA L A  +
Sbjct: 114 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER--AIPNYNVMGLAKASLEANVR 171
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLRDFGTTD 240
            ++  +G   +RVN+I  G  ++    G+  KD+   +A         RT  + D G + 
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPIRRTVTIEDVGNS- 228
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
                   +L  D S  +SG +  VD G ++  +
Sbjct: 229 ------AAFLCSDLSAGISGEVVHVDGGFSIAAM 256

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 15  CQLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVR 72
             L  K  +V G ++   LG      L +AG   VA + + +RL+   +++ +  G    
Sbjct: 4   VDLSGKKALVXGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGG--- 59
Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
           A+    DV+ +   ++       EAFG +D LV+    +     P +  E  +    + +
Sbjct: 60  ALLFRADVTQD-EELDALFAGVKEAFGGLDYLVHAIAFA-----PREAXEGRYIDTRRQD 113
Query: 133 LTGSWLVSKYVCIRM-RDAN----QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
              +  VS Y  + + R A     + G ++ ++  A  S   +P     A +KA L A  
Sbjct: 114 WLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYA--SEKVVPKYNVXAIAKAALEASV 171
Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV 247
           + L+ ELG   +RVN+I  G  ++     +       +  ++T PLR    T   + +L 
Sbjct: 172 RYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKXYDRVAQTAPLRR-NITQEEVGNLG 230
Query: 248 RYLVHDSSEYVSGNIFIVDSGATLPG 273
            +L+   +  ++G +  VD+G  + G
Sbjct: 231 LFLLSPLASGITGEVVYVDAGYHIXG 256

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K ++VTG +S L   + +  A  + G  + A   + D+LK   +E   Q GS +   
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDI--- 59
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW-NHIMKTNL 133
            ++ DV A  A+I+    +  + + + D  V++   +     P D  + ++ N + +   
Sbjct: 60  VLQCDV-AEDASIDTMFAELGKVWPKFDGFVHSIAFA-----PGDQLDGDYVNAVTREGF 113
Query: 134 TGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
             +  +S Y  + M  A     N   +++ +S + A     +P       +KA L A  +
Sbjct: 114 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER--AIPNYNVMGLAKASLEANVR 171
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLRDFGTTD 240
            ++  +G   +RVN+I  G  ++    G+  KD+   +A         RT  + D G + 
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPIRRTVTIEDVGNS- 228
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
                   +L  D S  +SG +  VD G ++  +
Sbjct: 229 ------AAFLCSDLSAGISGEVVHVDGGFSIAAM 256

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 37/274 (13%)
Query: 17  LDNKVVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K ++VTG +S L   + +  A  + G  + A   + D+LK   +E   Q GS +   
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDI--- 59
Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEW-NHIMKTNL 133
            ++ DV A  A+I+    +  + + + D  V++   +     P D  + ++ N + +   
Sbjct: 60  VLQCDV-AEDASIDTMFAELGKVWPKFDGFVHSISFA-----PGDQLDGDYVNAVTREGF 113
Query: 134 TGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
             +  +S Y  + M  A     N   +++ +S + A     +P       +KA L A  +
Sbjct: 114 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER--AIPNYNVMGLAKASLEANVR 171
Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLRDFGTTD 240
            ++  +G   +RVN+I  G  ++    G+  KD+   +A         RT  + D G + 
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPIRRTVTIEDVGNS- 228
Query: 241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL 274
                   +L  D S  +SG +  VD G ++  +
Sbjct: 229 ------AAFLCSDLSAGISGEVVHVDGGFSIAAM 256

>pdb|1Z6Z|A Chain A, Crystal Structure Of Human Sepiapterin Reductase In Complex With Nadp+ Length = 282

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 17  LDNKVVMVTGASSGLGR---EFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           L   V ++TGAS G GR        L   G  +V +AR  + L+ L  E+  +  S +R 
Sbjct: 24  LGRAVCLLTGASRGFGRTLAPLLASLLSPGSVLVLSARNDEALRQLEAELGAER-SGLRV 82
Query: 74  MAVELDVSAN-------GAAIENSVQKAWEAFGRIDALVNNAGVSGAV-KSPLDLTEE-E 124
           + V  D+ A        GA  E    K  +       L+NNAG  G V K  +DL++  +
Sbjct: 83  VRVPADLGAEAGLQQLLGALRELPRPKGLQRL----LLINNAGSLGDVSKGFVDLSDSTQ 138
Query: 125 WNHIMKTNLTGSWLVSKYVCIRMRDA-NQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
            N+    NLT    ++  V     D+     +V+NISS+ A       G   Y + KA  
Sbjct: 139 VNNYWALNLTSMLCLTSSVLKAFPDSPGLNRTVVNISSLCALQ--PFKGWALYCAGKAAR 196
Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITE 215
           + + + L+LE     +RV +  PG   +++ +
Sbjct: 197 DMLFQVLALE--EPNVRVLNYAPGPLDTDMQQ 226

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 8   CLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQS 67
            + LE    L  +  +VTG+S G+G      LA AG  ++    +     ++   I    
Sbjct: 22  SMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG 81
Query: 68  GSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWN 126
           G+   A  +  D+S  GA  +  +++A EA   +D LV NA  S  + + L  LT  +  
Sbjct: 82  GT---AQELAGDLSEAGAGTD-LIERA-EAIAPVDILVINA--SAQINATLSALTPNDLA 134
Query: 127 HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL-PGGV--AYASSKAGL 183
             +  NL  +  + +    +M  A + G V++I SI      QL P  V  AYA++KA  
Sbjct: 135 FQLAVNLGSTVDMLQSALPKMV-ARKWGRVVSIGSI-----NQLRPKSVVTAYAATKAAQ 188
Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSE 212
           + + +  + +     + +N++ PGL  ++
Sbjct: 189 HNLIQSQARDFAGDNVLLNTLAPGLVDTD 217

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 27/154 (17%)
Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCR-----IVAAARRVDRLKSLCDEINKQSGSSVRA 73
           ++V +VTGA+ G+G    L +A+  CR     +V  AR V R ++   ++  + G S R 
Sbjct: 2   SRVALVTGANRGIG----LAIARELCRQFSGDVVLTARDVARGQAAVQQLQAE-GLSPRF 56
Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKS----PLDLTEEEWNHIM 129
             +++D   +  A+ + ++K +   G ++ LVNNA V  A KS    P D+  E     +
Sbjct: 57  HQLDIDDLQSIRALRDFLRKEY---GGLNVLVNNAAV--AFKSDDPMPFDIKAE---MTL 108
Query: 130 KTNLTGSWLVSKYVCIRMRD-ANQEGSVINISSI 162
           KTN    +  ++ +C  +       G V+NISS+
Sbjct: 109 KTN----FFATRNMCNELLPIMKPHGRVVNISSL 138

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 18  DNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           + +V +VTGA+ G+G     DL +     +V  AR V R ++   ++  + G S R   +
Sbjct: 3   NTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAE-GLSPRFHQL 61
Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI-----MKT 131
           ++    +  A+ + ++K    +G +D LVNNA ++  + +P         HI     MKT
Sbjct: 62  DIIDLQSIRALCDFLRK---EYGGLDVLVNNAAIAFQLDNPTPF------HIQAELTMKT 112
Query: 132 NLTGSWLVSKYVCIRMRD-ANQEGSVINISS 161
           N  G    ++ VC  +      +G V+N+SS
Sbjct: 113 NFMG----TRNVCTELLPLIKPQGRVVNVSS 139

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE-GLMKKDWLNNV 226
           G+  G +AYA SK  L    +  +   G   +R+N+I PG  ++ + + GL    +  ++
Sbjct: 147 GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESI 206
Query: 227 ASRTYPLRDFGTTDPA-LTSLVRYLVHDSSEYVSGNIFIVDSG 268
           A    P+      +P+ + S++ +L+  ++ YV G   ++D G
Sbjct: 207 AKFVPPMGR--RAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-79
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-77
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-77
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-76
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	9e-76
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-75
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-75
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-74
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	8e-74
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	7e-73
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	9e-73
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-72
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	6e-72
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-71
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-71
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-71
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	7e-71
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	8e-71
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-71
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-70
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-70
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	5e-70
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-70
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	9e-70
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	9e-70
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-69
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-69
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-69
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-69
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-69
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-69
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-69
1xq1_A	266	Putative tropinone reducatse; structural genomics,	8e-69
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	9e-69
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-68
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-68
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-68
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-68
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-68
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	4e-68
1xhl_A	297	Short-chain dehydrogenase/reductase family member	6e-68
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-67
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-67
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-67
1xkq_A	280	Short-chain reductase family member (5D234); parra	4e-67
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-66
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-66
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-66
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-66
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-66
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-66
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-66
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-66
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	8e-66
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-65
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-65
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	3e-65
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-65
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	7e-65
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-65
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-64
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-64
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-64
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-64
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-64
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	4e-64
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-64
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-64
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-63
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-63
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	5e-63
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	6e-63
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	7e-63
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	8e-63
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	9e-63
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-62
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-62
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-62
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-62
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-62
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-62
3rih_A	293	Short chain dehydrogenase or reductase; structural	8e-62
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	8e-62
4e4y_A	244	Short chain dehydrogenase family protein; structur	9e-62
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-61
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-61
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-61
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-61
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-61
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-60
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-60
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-60
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-60
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	5e-60
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	8e-60
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-59
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-59
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-59
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-59
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-59
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-59
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-59
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	6e-59
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	9e-59
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-58
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-58
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-58
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	6e-58
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	6e-58
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	7e-58
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-57
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-57
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-57
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-57
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-57
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-57
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-57
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-57
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-57
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-57
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	5e-57
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	7e-57
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-56
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-56
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-56
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-56
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-56
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-56
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-56
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-56
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-56
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-55
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-55
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-55
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-55
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-54
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-54
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-54
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-54
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	6e-54
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-53
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-53
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-53
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-53
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-53
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-53
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-53
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-52
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-52
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	7e-52
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-51
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-51
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-51
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-51
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-51
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-50
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-50
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-50
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-50
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	6e-50
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-50
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	9e-50
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-49
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	8e-49
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-48
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-48
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-48
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-44
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-48
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-48
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	7e-48
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-46
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-46
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-45
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-45
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	9e-44
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-43
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-43
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-42
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	7e-41
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-39
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-36
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-30
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-18
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-17
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	5e-09
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	9e-09
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-08
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-08
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	3e-08
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	3e-08
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	3e-08
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-08
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	4e-08
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	6e-08
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	7e-08
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	4e-07
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-06
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-04

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  239 bits (613), Expect = 4e-79
 Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 9/256 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  ++TGAS+G+G++  L  A+AG ++  AAR  D L+ + DEI        +A+ +
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG---GKALPI 86

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+     +   + +     G ID  V NAG+       LD+  EE+  I  TN+TG 
Sbjct: 87  RCDVT-QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM-LDMPLEEFQRIQDTNVTGV 144

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L ++     M D    G++I  +S++            Y +SKA +  +TK +++EL  
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAP 204

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           H+IRVNS+ PG  ++E+ E L   D+      +  PL   G  +  LT L  YL   +S 
Sbjct: 205 HQIRVNSVSPGYIRTELVEPL--ADYHALWEPKI-PLGRMGRPE-ELTGLYLYLASAASS 260

Query: 257 YVSGNIFIVDSGATLP 272
           Y++G+  ++D G T P
Sbjct: 261 YMTGSDIVIDGGYTCP 276

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  236 bits (605), Expect = 1e-77
 Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 12/267 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              KV  +TG  +GLG+     L+  G + V A+R++D LK+  ++I+ Q+G   +  A+
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAI 81

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           + DV  +   ++N+V +  +  G  + ++NNA   G   SP   L+   W  I    L G
Sbjct: 82  QCDVR-DPDMVQNTVSELIKVAGHPNIVINNAA--GNFISPTERLSPNAWKTITDIVLNG 138

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  V+  +  ++  A +  + ++I++I A   G     V  AS+KAG+ AM+K L+ E G
Sbjct: 139 TAFVTLEIGKQLIKAQKGAAFLSITTIYA-ETGS-GFVVPSASAKAGVEAMSKSLAAEWG 196

Query: 196 VHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
            + +R N I PG  K++     +     +   +  R  P    GT +  L +L  +L  D
Sbjct: 197 KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI-PCGRLGTVE-ELANLAAFLCSD 254

Query: 254 SSEYVSGNIFIVDSGATLPGLPIFSSL 280
            + +++G +   D G  +     F+ L
Sbjct: 255 YASWINGAVIKFDGGEEVLISGEFNDL 281

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  235 bits (601), Expect = 3e-77
 Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 5/264 (1%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             ++  +VTG  SG+G+     L  AG  ++   R  D+L     E+     +       
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D++ N      +V       GR+  +V+ AG S  +     +  E W   +  N+ G+
Sbjct: 69  PTDIT-NEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGT 127

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             V K+    M      GS + ISSIAA S        AY  +K+ ++ + +  + ELG 
Sbjct: 128 MYVLKHAAREMV-RGGGGSFVGISSIAA-SNTH-RWFGAYGVTKSAVDHLMQLAADELGA 184

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             +RVNSI PGL ++++   + +   L++  +   PL   G  +  + ++  +L+ D++ 
Sbjct: 185 SWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE-DVANMAMFLLSDAAS 243

Query: 257 YVSGNIFIVDSGATLPGLPIFSSL 280
           +V+G +  VD G  L   P FS++
Sbjct: 244 FVTGQVINVDGGQMLRRGPDFSAM 267

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  232 bits (594), Expect = 2e-76
 Identities = 80/255 (31%), Positives = 128/255 (50%), Gaps = 9/255 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD K  ++TGA+ G+G +     A AG R+V + R V  L +    + +Q G       V
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTV 75

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +D++    A     ++A EAFG +D LVNNAG+    +  +D   + ++  +  NL   
Sbjct: 76  AIDLA-EPDAPAELARRAAEAFGGLDVLVNNAGI-SHPQPVVDTDPQLFDATIAVNLRAP 133

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            L++  V   M  A + G++I ++S AA     LP   AY +SKAGL   TK L+ ELG 
Sbjct: 134 ALLASAVGKAMVAAGEGGAIITVASAAAL-AP-LPDHYAYCTSKAGLVMATKVLARELGP 191

Query: 197 HKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
           H IR NS+CP +  +E+ + +   +     + +R  PL  F      ++  V +L  D++
Sbjct: 192 HGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARI-PLGRFAVPH-EVSDAVVWLASDAA 249

Query: 256 EYVSGNIFIVDSGAT 270
             ++G    VD G T
Sbjct: 250 SMINGVDIPVDGGYT 264

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  230 bits (589), Expect = 9e-76
 Identities = 69/256 (26%), Positives = 128/256 (50%), Gaps = 8/256 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LDN+V +VTG +  +G      LA+AG R++ A           +++  +        +V
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH---DVSSV 67

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +DV+ N  +++N+V+   E  GR+D LV  AG+  +     D+T+ +W   +  NL G 
Sbjct: 68  VMDVT-NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGM 126

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +   + V   M    ++G ++ I S++     +     AY +SKAG++   + L+ E   
Sbjct: 127 FRSCQAVGRIML-EQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAP 185

Query: 197 HKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
           H IR N++ P   ++ +T   M K +  +   + T P+   G  D  + S+V++L  D++
Sbjct: 186 HGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGT-PMGRVGQPD-EVASVVQFLASDAA 243

Query: 256 EYVSGNIFIVDSGATL 271
             ++G I  VD+G T+
Sbjct: 244 SLMTGAIVNVDAGFTV 259

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  229 bits (587), Expect = 2e-75
 Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 22/267 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +  KVV++TG SSG+G+      AK G R+V   R  ++L+    EI +  G   + + V
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG---QILTV 60

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           ++DV  N   I+  +++  E FGRID L+NNA   G    P  DL+   WN ++   L G
Sbjct: 61  QMDVR-NTDDIQKMIEQIDEKFGRIDILINNAA--GNFICPAEDLSVNGWNSVINIVLNG 117

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++  S+ +     +   +G++IN+ +  A      PG +  A++KAG+ AMTK L++E G
Sbjct: 118 TFYCSQAIGKYWIEKGIKGNIINMVATYAW-DAG-PGVIHSAAAKAGVLAMTKTLAVEWG 175

Query: 196 V-HKIRVNSICPGLFKSEITE------GLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
             + IRVN+I PG  +             M K  + +V     PL   GT +  +  L  
Sbjct: 176 RKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV-----PLGRLGTPE-EIAGLAY 229

Query: 249 YLVHDSSEYVSGNIFIVDSGATLPGLP 275
           YL  D + Y++G    +D G  L   P
Sbjct: 230 YLCSDEAAYINGTCMTMDGGQHLHQYP 256

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  229 bits (587), Expect = 5e-75
 Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 15/263 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             + V ++TGA SG+GR   L LA  G  + A  R    ++ + DEI    G   +A+A+
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG---QAIAL 82

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           E DVS +   + N+V+     FG +D +V NAG++G      DL   EW+  +  NL G+
Sbjct: 83  EADVS-DELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGT 141

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L        ++     G+++ +SSI  T     PG  AY ++KA   A+ + L+LELG 
Sbjct: 142 FLTLHLTVPYLK-QRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGK 200

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRD-------FGTT-DPALTSLVR 248
           H IRVN++CPG  ++ I++    +          +P           G + D A   L+R
Sbjct: 201 HHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVA--ELIR 258

Query: 249 YLVHDSSEYVSGNIFIVDSGATL 271
           +LV + + +V+G+   +D G  L
Sbjct: 259 FLVSERARHVTGSPVWIDGGQGL 281

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  226 bits (580), Expect = 2e-74
 Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 13/255 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +  G   +A A 
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFAC 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D++ +   +      A    G++D LVNNAG  G    P D+   ++    + N+   
Sbjct: 66  RCDIT-SEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFSF 122

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +S+ V   M   N  G ++ I+S+AA          +YASSKA  + + + ++ +LG 
Sbjct: 123 FHLSQLVAPEME-KNGGGVILTITSMAAE-NKN-INMTSYASSKAAASHLVRNMAFDLGE 179

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDSS 255
             IRVN I PG   ++  + ++  +    +   T P+R  G   D A  +   +L   ++
Sbjct: 180 KNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT-PIRRLGQPQDIA--NAALFLCSPAA 236

Query: 256 EYVSGNIFIVDSGAT 270
            +VSG I  V  G  
Sbjct: 237 SWVSGQILTVSGGGV 251

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  225 bits (577), Expect = 8e-74
 Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 18/261 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KVV+++G    LG       A+ G  +V AAR V+RL+ +  ++        RA++V
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR---RALSV 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D++ + A + + V +  +A+GR+D ++NNA    ++K   + T E     ++  + G+
Sbjct: 66  GTDIT-DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGA 124

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             + +     + +   +G+V+N++S+      Q     AY  +K+ L AM++ L+ ELG 
Sbjct: 125 LRLIQGFTPALEE--SKGAVVNVNSMVVR-HSQ-AKYGAYKMAKSALLAMSQTLATELGE 180

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVAS---------RTYPLRDFGTTDPALTSLV 247
             IRVNS+ PG       +   +        S             L+   T D  + S +
Sbjct: 181 KGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED-EVASAI 239

Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            ++  D +  ++G    V+ G
Sbjct: 240 LFMASDLASGITGQALDVNCG 260

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  223 bits (570), Expect = 7e-73
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 12/258 (4%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L NKVV+VTGA SG+GR      A     +VA     DRL  +  E+          + 
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK---EVLG 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DVS     +E  V++ +E + RID L NNAG+   V    ++++E W  ++  NL  
Sbjct: 61  VKADVS-KKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYS 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++  S+ V   M     +G ++N +SIA   RG    G  Y  +K GL  +T+ ++   G
Sbjct: 120 AFYSSRAVIPIML-KQGKGVIVNTASIAGI-RGG-FAGAPYTVAKHGLIGLTRSIAAHYG 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD--WLNNVASRTYPLRDFGTT-DPALTSLVRYLVH 252
              IR  ++ PG  K+ I  G  K     +  +              D A  +++ +L  
Sbjct: 177 DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIA--NVIVFLAS 234

Query: 253 DSSEYVSGNIFIVDSGAT 270
           D + +V+G+  +VD G T
Sbjct: 235 DEASFVNGDAVVVDGGLT 252

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  222 bits (568), Expect = 9e-73
 Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 20/254 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
                 +VTGA  G+GR+    L  +G ++VA  R    L SL  E             V
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTG 135
            +D+        ++ +KA    G +D LVNNA +   +  P L++T+E ++     NL  
Sbjct: 58  CVDLGD-----WDATEKALGGIGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRS 110

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + VS+ V   M +    GS++N+SS+ A      P  + Y+S+K  +  +TK +++ELG
Sbjct: 111 VFQVSQMVARDMINRGVPGSIVNVSSMVAH-VT-FPNLITYSSTKGAMTMLTKAMAMELG 168

Query: 196 VHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
            HKIRVNS+ P +  +++ + +    ++   +  R  PLR F   +  + + + +L+ D 
Sbjct: 169 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH-PLRKFAEVE-DVVNSILFLLSDR 226

Query: 255 SEYVSGNIFIVDSG 268
           S   SG   +VD+G
Sbjct: 227 SASTSGGGILVDAG 240

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  223 bits (570), Expect = 2e-72
 Identities = 84/257 (32%), Positives = 122/257 (47%), Gaps = 11/257 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ K+ +VTGASSG+GR   L  A+ G ++V  AR  + L  L DEI    G    A A+
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG---EAAAL 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV  + A  E  V+ A   FG +D   NNAG  GA+     L+ E W   + TNLT +
Sbjct: 63  AGDVG-DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSA 121

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L +KY    +  A   GS+   SS    + G   G   YA+SKAGL  + + L++ELG 
Sbjct: 122 FLAAKYQVPAIA-ALGGGSLTFTSSFVGHTAG-FAGVAPYAASKAGLIGLVQALAVELGA 179

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDW--LNNVASRTYPLRDFGTT-DPALTSLVRYLVHD 253
             IRVN++ PG   +      +              + L+      + A      YL  D
Sbjct: 180 RGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIA--EAALYLASD 237

Query: 254 SSEYVSGNIFIVDSGAT 270
            + +V+G   + D GA+
Sbjct: 238 GASFVTGAALLADGGAS 254

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  220 bits (563), Expect = 6e-72
 Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 18/253 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTGA  G+GR     L   G R+VA +R    L SL  E             V
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +D+         + ++A  + G +D LVNNA V+  ++  L++T+E ++   + NL   
Sbjct: 58  CVDLGD-----WEATERALGSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAV 111

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             VS+ V   +      G+++N+SS  +  R  +     Y S+K  L+ +TK ++LELG 
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQ-RA-VTNHSVYCSTKGALDMLTKVMALELGP 169

Query: 197 HKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
           HKIRVN++ P +  + + +           + +R  PL  F   +  + + + +L+ D S
Sbjct: 170 HKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI-PLGKFAEVE-HVVNAILFLLSDRS 227

Query: 256 EYVSGNIFIVDSG 268
              +G+   V+ G
Sbjct: 228 GMTTGSTLPVEGG 240

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  219 bits (561), Expect = 2e-71
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 11/258 (4%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAM 74
            L+ KVV++TG+S+GLG+   +  A    ++V     + D   S+ +EI K  G    A+
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---EAI 60

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           AV+ DV+   + + N VQ A + FG++D ++NNAG+     S  +++  +WN ++ TNLT
Sbjct: 61  AVKGDVT-VESDVINLVQSAIKEFGKLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLT 118

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++L S+       + + +G+VIN+SS+        P  V YA+SK G+  MT+ L+LE 
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKI-PW-PLFVHYAASKGGMKLMTETLALEY 176

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHD 253
               IRVN+I PG   + I                  P+   G   + A  ++  +L   
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIA--AVAAWLASS 234

Query: 254 SSEYVSGNIFIVDSGATL 271
            + YV+G     D G TL
Sbjct: 235 EASYVTGITLFADGGMTL 252

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  220 bits (564), Expect = 2e-71
 Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 15/265 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS--VRAM 74
           L  +V +VTG ++G+G+    +L + G  +V A+R+++RLKS  DE+      +   R +
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNL 133
            ++ ++  N   + N V+   + FG+I+ LVNN G  G   SP   ++ + W+ +++TNL
Sbjct: 76  PIQCNIR-NEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNL 132

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           TG++ + K V       +  GS++NI           P  V   +++AG+  +TK L+LE
Sbjct: 133 TGTFYMCKAVYSSWMKEHG-GSIVNIIVPTKAG---FPLAVHSGAARAGVYNLTKSLALE 188

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
                IR+N + PG+  S+          + +      +  P +  G  +  ++S+V +L
Sbjct: 189 WACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI-PAKRIGVPE-EVSSVVCFL 246

Query: 251 VHDSSEYVSGNIFIVDSGATLPGLP 275
           +  ++ +++G    VD G +L    
Sbjct: 247 LSPAASFITGQSVDVDGGRSLYTHS 271

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  219 bits (560), Expect = 4e-71
 Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 17/268 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+NKV ++TGA  G+G E    LA+AG R+V A      L      +         A+  
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG------RGAVHH 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
            +D++ N  ++   +    + FGR+D + NNA  S      +  +T + W+     N  G
Sbjct: 63  VVDLT-NEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARG 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           + L+ KY   R+  +   G+++NISS  A          AYA +KA +  +T+ ++ + G
Sbjct: 122 TMLMCKYAIPRLI-SAGGGAIVNISSATAH-AAY-DMSTAYACTKAAIETLTRYVATQYG 178

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVHDS 254
            H +R N+I PGL ++   E  + +  ++  A+        G   P  +  LV +L  D 
Sbjct: 179 RHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHH-LAGRIGE--PHEIAELVCFLASDR 235

Query: 255 SEYVSGNIFIVDSG--ATLPGLPIFSSL 280
           + +++G +   DSG  A LPGLP   + 
Sbjct: 236 AAFITGQVIAADSGLLAHLPGLPQIRAS 263

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  218 bits (557), Expect = 7e-71
 Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 16/259 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           + +NKV +VTG+  G+G+ +   LA+ G  +V A    +  +++  +I    G    A++
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG---TAIS 62

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNL 133
           V +DVS +  + +    +    FG ID LVNNA + G +K      +  E +   M  NL
Sbjct: 63  VAVDVS-DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G+   ++ V  +M      G+++N SS AA           Y  +K G+N +T+ LS E
Sbjct: 122 DGALWCTRAVYKKMTKRGG-GAIVNQSSTAA-----WLYSNYYGLAKVGINGLTQQLSRE 175

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVH 252
           LG   IR+N+I PG   +E       K+ ++++     PL   GT  D     +  +L+ 
Sbjct: 176 LGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL-PLSRMGTPDDLV--GMCLFLLS 232

Query: 253 DSSEYVSGNIFIVDSGATL 271
           D + +++G IF VD G  +
Sbjct: 233 DEASWITGQIFNVDGGQII 251

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  217 bits (556), Expect = 8e-71
 Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 13/256 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L++ V +VTGA++G+GR      AKAG  +V    + +  +++   I +  G   +A+ 
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG---KAIG 65

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +E +V+ +    E  ++ A + FG+I  LVNNAG  G    P D+   ++    K NL  
Sbjct: 66  LECNVT-DEQHREAVIKAALDQFGKITVLVNNAGGGG--PKPFDMPMSDFEWAFKLNLFS 122

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + +S+     M+ A   G+++NISS+A           +Y SSKA +N +T+ ++ ++G
Sbjct: 123 LFRLSQLAAPHMQKAGG-GAILNISSMAGE-NTN-VRMASYGSSKAAVNHLTRNIAFDVG 179

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDS 254
              IRVN+I PG  K++    ++  +    +   T PL   G   D A  +   +L   +
Sbjct: 180 PMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT-PLGRLGEAQDIA--NAALFLCSPA 236

Query: 255 SEYVSGNIFIVDSGAT 270
           + ++SG +  V  G  
Sbjct: 237 AAWISGQVLTVSGGGV 252

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  218 bits (557), Expect = 8e-71
 Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+NKV +VT ++ G+G      LA+ G  +V ++R+ + +      +  +          
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL---SVTGT 68

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
              V       E  V  A    G +D LV+NA V+    + +D TEE W+ I+  N+  +
Sbjct: 69  VCHVG-KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKAT 127

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            L++K V   M      GSV+ +SS+ A      P    Y  SK  L  +TK L++EL  
Sbjct: 128 VLMTKAVVPEME-KRGGGSVLIVSSVGAY-HPF-PNLGPYNVSKTALLGLTKNLAVELAP 184

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDSS 255
             IRVN + PGL K+  ++ L            +  +R  G   D A   +V +L  + +
Sbjct: 185 RNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCA--GIVSFLCSEDA 242

Query: 256 EYVSGNIFIVDSGAT 270
            Y++G   +V  G  
Sbjct: 243 SYITGETVVVGGGTA 257

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  217 bits (556), Expect = 1e-70
 Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 16/260 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L     +VTG S G+G     +LA  G R+   +R    L    +   ++          
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL---NVEGS 75

Query: 77  ELDVSANGAAIENSVQKAWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             D+  +    +  +Q     F G+++ LVNNAGV    K   D TE+++N IM TN   
Sbjct: 76  VCDLL-SRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEA 133

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ +S+     ++ A+Q G+VI +SSIA  S    P    Y++SK  +N MTK L+ E  
Sbjct: 134 AYHLSQIAYPLLK-ASQNGNVIFLSSIAGFSAL--PSVSLYSASKGAINQMTKSLACEWA 190

Query: 196 VHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
              IRVNS+ PG+  + + E  +K     K+ ++N   +T P+   G     +++L+ +L
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT-PMGRAGKPQ-EVSALIAFL 248

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
              ++ Y++G I   D G T
Sbjct: 249 CFPAASYITGQIIWADGGFT 268

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  216 bits (553), Expect = 4e-70
 Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 14/262 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  ++VV++TG  SGLGR   + LA  G ++       + L++    +  ++      + 
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAV-LETAPDAEVLT 68

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DVS + A +E  V    E FGRID   NNAG+ G        T  E++ ++  NL G
Sbjct: 69  TVADVS-DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRG 127

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L  + V   MR     G V+N +S+    RG       YA++K G+  +T+  ++E G
Sbjct: 128 VFLGLEKVLKIMR-EQGSGMVVNTASVGGI-RGI-GNQSGYAAAKHGVVGLTRNSAVEYG 184

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVA------SRTYPLRDFGTT-DPALTSLVR 248
            + IR+N+I PG   + + E  MK+    N         +  P + +G   + A  ++V 
Sbjct: 185 RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIA--AVVA 242

Query: 249 YLVHDSSEYVSGNIFIVDSGAT 270
           +L+ D + YV+  +  +D G +
Sbjct: 243 FLLSDDASYVNATVVPIDGGQS 264

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  215 bits (551), Expect = 5e-70
 Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 15/259 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+    +VTG S G+G     +LA  G  +   +R    L     +   +     +  A 
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF---KVEAS 63

Query: 77  ELDVSANGAAIENSVQKAWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             D+S + +  +  +      F G+++ LVNNAG+    K   D T E+++ IM  N   
Sbjct: 64  VCDLS-SRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEA 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ +S      ++ A++ G+V+ ISS++       P    Y ++K  ++ +T+CL+ E  
Sbjct: 122 AYHLSVLAHPFLK-ASERGNVVFISSVSGALAV--PYEAVYGATKGAMDQLTRCLAFEWA 178

Query: 196 VHKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
              IRVN + PG+  + + E  +    +K+ LN +  R   LR  G     L ++V +L 
Sbjct: 179 KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-ALRRMGEPK-ELAAMVAFLC 236

Query: 252 HDSSEYVSGNIFIVDSGAT 270
             ++ YV+G I  VD G  
Sbjct: 237 FPAASYVTGQIIYVDGGLM 255

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  215 bits (550), Expect = 6e-70
 Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 10/253 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTG++ GLG  +   LA AG R++    R   L    D + ++      A  V
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY---DAHGV 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+ +  AIE +  K       +D L+NNAG+    K  ++L  E W  ++ TNLT +
Sbjct: 64  AFDVT-DELAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSA 121

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +LVS+    RM   N  G +INI S+   S+   P    Y ++K G+  +T  ++ E   
Sbjct: 122 FLVSRSAAKRMIARNSGGKIINIGSLT--SQAARPTVAPYTAAKGGIKMLTCSMAAEWAQ 179

Query: 197 HKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
             I+ N+I PG   +++   L++ K + + V S T P + +G  +  L     +L   +S
Sbjct: 180 FNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSST-PSQRWGRPEE-LIGTAIFLSSKAS 237

Query: 256 EYVSGNIFIVDSG 268
           +Y++G I  VD G
Sbjct: 238 DYINGQIIYVDGG 250

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  215 bits (551), Expect = 9e-70
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 11/259 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KV  +TG  SG+G        + GC  V A+R + R+ +   ++   +G   R + +
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG--RRCLPL 82

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
            +DV     A+  +V +A + FGRID L+N A   G    P   L+   +  +M  + +G
Sbjct: 83  SMDVR-APPAVMAAVDQALKEFGRIDILINCAA--GNFLCPAGALSFNAFKTVMDIDTSG 139

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ VS+ +  +    +  G ++NI++     RGQ    V   S+KA ++AMT+ L++E G
Sbjct: 140 TFNVSRVLYEKFF-RDHGGVIVNITATLGN-RGQ-ALQVHAGSAKAAVDAMTRHLAVEWG 196

Query: 196 VHKIRVNSICPGLFKS-EITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
              IRVNS+ PG     E    L       +      PL+  G     +   V YL    
Sbjct: 197 PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKT-EIAHSVLYLASPL 255

Query: 255 SEYVSGNIFIVDSGATLPG 273
           + YV+G + + D GA L  
Sbjct: 256 ASYVTGAVLVADGGAWLTF 274

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  215 bits (550), Expect = 9e-70
 Identities = 79/253 (31%), Positives = 134/253 (52%), Gaps = 9/253 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V +VTG S GLG      LA+AGC +V A+R ++       ++ ++ G  V  MA 
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAF 76

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS N   ++  ++   E FG++D +VN AG+        +   +E+  +++ NL G+
Sbjct: 77  RCDVS-NYEEVKKLLEAVKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGT 134

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + V +     +R  +   S+INI S+       +P   AYA+SK G+ ++TK L+ E G 
Sbjct: 135 YYVCREAFSLLR-ESDNPSIINIGSLT-VEEVTMPNISAYAASKGGVASLTKALAKEWGR 192

Query: 197 HKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
           + IRVN I PG +++++TE +    + L+ +  R  PL   G  +  L  +  +L  + +
Sbjct: 193 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI-PLGRTGVPED-LKGVAVFLASEEA 250

Query: 256 EYVSGNIFIVDSG 268
           +YV+G I  VD G
Sbjct: 251 KYVTGQIIFVDGG 263

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  215 bits (550), Expect = 1e-69
 Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV  VTG+S G+G       A+AG  +          +       K  G  V + A 
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ-KTYG--VHSKAY 88

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLTG 135
           + ++S +  ++E ++ +  + FG ID  V NAGV+      +D    + WN I+  +L G
Sbjct: 89  KCNIS-DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNG 147

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +  S  +    +  N +GS+I  SSI+            Y ++KA    + K L++E  
Sbjct: 148 VYYCSHNIGKIFK-KNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA 206

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
               RVN+I PG   ++IT+    KD        T PL   G T   L     YL  ++S
Sbjct: 207 -PFARVNTISPGYIDTDITDFAS-KDMKAKWWQLT-PLGREGLTQ-ELVGGYLYLASNAS 262

Query: 256 EYVSGNIFIVDSGATLP 272
            + +G+  ++D G T P
Sbjct: 263 TFTTGSDVVIDGGYTCP 279

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  213 bits (546), Expect = 2e-69
 Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 12/256 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV ++TG + G+G        + G +++   R  D  +     +    G+  +    
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----GTPDQIQFF 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + D S +            +AFG +  LVNNAG++   KS  + T  EW  ++  NL G 
Sbjct: 60  QHDSS-DEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLLAVNLDGV 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  ++    RM++     S+IN+SSI     G  P   AY +SK  +  M+K  +L+  +
Sbjct: 118 FFGTRLGIQRMKNKGLGASIINMSSIEGF-VGD-PSLGAYNASKGAVRIMSKSAALDCAL 175

Query: 197 --HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
             + +RVN++ PG  K+ + + L   +   +  ++T P+   G  +  +  +  YL  + 
Sbjct: 176 KDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPN-DIAYICVYLASNE 233

Query: 255 SEYVSGNIFIVDSGAT 270
           S++ +G+ F+VD G T
Sbjct: 234 SKFATGSEFVVDGGYT 249

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  214 bits (547), Expect = 2e-69
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ K  ++TG++ G+GR F     + G  +  A   ++R +    EI         A AV
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG------PAAYAV 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           ++DV+    +I+ ++    E  G +D LVNNA +   +   +++T E +  +   N+ G+
Sbjct: 60  QMDVT-RQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGT 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
               +    +M    + G +IN++S A   RG+      Y ++KA + ++T+   L+L  
Sbjct: 118 LFTLQAAARQMIAQGRGGKIINMASQAGR-RGE-ALVAIYCATKAAVISLTQSAGLDLIK 175

Query: 197 HKIRVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPA-LTSL 246
           H+I VN+I PG+   E  +G+                 +     P    GT     LT +
Sbjct: 176 HRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGT--AEDLTGM 233

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATL 271
             +L    S+Y+    + VD G  +
Sbjct: 234 AIFLASAESDYIVSQTYNVDGGNWM 258

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  213 bits (546), Expect = 3e-69
 Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 18/263 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             NK ++VTG + G+G  F   +A AG  +    R       + +++ K+ G  V+  A 
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAY 69

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + DVS N   +  ++Q+     G I  L+ NAGVS  VK   +LT E++  +   N+ G 
Sbjct: 70  QCDVS-NTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGV 127

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGG---VAYASSKAGLNAMTKCLS 191
           +   + V        Q+GS++  SS+++   ++  L G    V Y SSKA  + + K L+
Sbjct: 128 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 187

Query: 192 LELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
            E     IRVN++ PG   ++ T  +   ++    +N+     PL  F   +  +T    
Sbjct: 188 AEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNI-----PLNRFAQPE-EMTGQAI 241

Query: 249 YLVHDSSEYVSGNIFIVDSGATL 271
            L+ D + Y++G  + +D G  +
Sbjct: 242 LLLSDHATYMTGGEYFIDGGQLI 264

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  213 bits (546), Expect = 3e-69
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 11/254 (4%)

Query: 17  LDNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KVV+VT A+ +G+G          G  +V +     RL    D++        R  A
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG--RVEA 77

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DV+ +  A++  + +  E  GR+D LVNNAG+ G     +D+T+EEW+ ++   LT 
Sbjct: 78  VVCDVT-STEAVDALITQTVEKAGRLDVLVNNAGLGGQTPV-VDMTDEEWDRVLNVTLTS 135

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
               ++      R  +  G ++N +S+    R Q      YA++KAG+ A+T+C ++E  
Sbjct: 136 VMRATRAALRYFRGVDHGGVIVNNASVLGW-RAQ-HSQSHYAAAKAGVMALTRCSAIEAV 193

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDS 254
              +R+N++ P + + +  E     + L+ +AS            + A  + + +L  D 
Sbjct: 194 EFGVRINAVSPSIARHKFLEKTSSSELLDRLASDE-AFGRAAEPWEVA--ATIAFLASDY 250

Query: 255 SEYVSGNIFIVDSG 268
           S Y++G +  V S 
Sbjct: 251 SSYMTGEVVSVSSQ 264

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  213 bits (546), Expect = 4e-69
 Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 22/267 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           + + KV +VTGA   +G    L LA+ G  I       + L+     + ++      A +
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV---EARS 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV+ +  A+  +V      FG+ID L NNAG  GA     D   +++  ++  N+TG
Sbjct: 61  YVCDVT-SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTG 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ V K V  +M      G ++N +S+A   +G  P   AY +SK  + A+T+  +L+L 
Sbjct: 120 AFHVLKAVSRQMI-TQNYGRIVNTASMAGV-KG-PPNMAAYGTSKGAIIALTETAALDLA 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY--------------PLRDFGTTDP 241
            + IRVN+I PG            +      +                  P+R +G  + 
Sbjct: 177 PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN- 235

Query: 242 ALTSLVRYLVHDSSEYVSGNIFIVDSG 268
            +  +V +L+ D S +++G    +  G
Sbjct: 236 EIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  213 bits (546), Expect = 4e-69
 Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 20/260 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              KVV+VTG   G+G         +G R+V   +     ++L  E+         A+ +
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFI 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+     ++  V +    FGR+D +VNNAG     + P + + + +  +++ NL G+
Sbjct: 60  LCDVT-QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + ++K     +R    +G+VINISS+     GQ    V Y ++K  + AMTK L+L+   
Sbjct: 119 YTLTKLALPYLR--KSQGNVINISSLVGA-IGQ-AQAVPYVATKGAVTAMTKALALDESP 174

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDW----LNNVASRTYPLRDFGTTDPA-LTSLVRYLV 251
           + +RVN I PG   + + E L                  PL   G   PA + +   +L 
Sbjct: 175 YGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQ--PAEVGAAAVFLA 232

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            +++ + +G   +V  GA L
Sbjct: 233 SEAN-FCTGIELLVTGGAEL 251

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  213 bits (544), Expect = 8e-69
 Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 11/259 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V+VTG + G+G     + A  G  I   AR    L     +  K+     +    
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF---QVTGS 68

Query: 77  ELDVSANGAAIENSVQKAWEAFG-RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             D S      E  +Q     FG ++D L+NN G     K  LD T E+++  + TNL  
Sbjct: 69  VCDAS-LRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLES 126

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ +S+     ++ A+  G++I +SSIA         G  Y+++K  LN + + L+ E  
Sbjct: 127 AYHLSQLAHPLLK-ASGCGNIIFMSSIAG-VVS-ASVGSIYSATKGALNQLARNLACEWA 183

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IR N++ P +  + + E +   ++   V SR  PL  FG  +  ++SLV +L   ++
Sbjct: 184 SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK-PLGRFGEPE-EVSSLVAFLCMPAA 241

Query: 256 EYVSGNIFIVDSGATLPGL 274
            Y++G    VD G T+ G 
Sbjct: 242 SYITGQTICVDGGLTVNGF 260

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  212 bits (542), Expect = 9e-69
 Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 16/254 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L++++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+++G   +   +
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +L         +   Q+    + R+D +++NAG+ G V    +   + W  +M+ N+  +
Sbjct: 70  DLLT-CTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +++++ +   +   +  GS++  SS     R       AYA+SK     M + L+ E   
Sbjct: 129 FMLTQALLPLLL-KSDAGSLVFTSSSVG--RQGRANWGAYAASKFATEGMMQVLADEYQ- 184

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
            ++RVN I PG  ++ +       +            +   T    +  L  +L+ D S 
Sbjct: 185 QRLRVNCINPGGTRTAMRASAFPTE----------DPQKLKTPA-DIMPLYLWLMGDDSR 233

Query: 257 YVSGNIFIVDSGAT 270
             +G  F    G  
Sbjct: 234 RKTGMTFDAQPGRK 247

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  213 bits (544), Expect = 1e-68
 Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 18/268 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +   KV ++TG+S+G+GR   +  A+ G ++    R  +RL+    +I     S     +
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV---KSPLDLTEEEWNHIMKTN 132
           V  DV+   A  +  +      FG++D LVNNAG +      K+    + E ++  +  N
Sbjct: 63  VVADVT-TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L     ++K     +     +G ++NISSIA+      P    Y+ +KA ++  T+  ++
Sbjct: 122 LRSVIALTKKAVPHLSS--TKGEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAI 178

Query: 193 ELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVAS--RTYPLRDFGTT-DPALT 244
           +L  H IRVNSI PGL  +     +       K + + +A+     P    G   D A  
Sbjct: 179 DLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIA-- 236

Query: 245 SLVRYLVHD-SSEYVSGNIFIVDSGATL 271
            ++ +L    +S Y+ G+  +VD G++L
Sbjct: 237 EVIAFLADRKTSSYIIGHQLVVDGGSSL 264

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  212 bits (543), Expect = 2e-68
 Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 11/246 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            + ++ +VTG  +G+GR     L+  G  +V   RR D L +   EI  ++G      AV
Sbjct: 31  GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG--NIVRAV 88

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV  +   +          F R+D LVNNAG +       ++T E+WN I+  NLTG+
Sbjct: 89  VCDVG-DPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGA 147

Query: 137 WLVSKYVCIRMRDANQE-GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +L +++    M+      G +IN  SI+A +    P    Y ++K  +  +TK  +L+  
Sbjct: 148 FLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR--PNSAPYTATKHAITGLTKSTALDGR 205

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD-S 254
           +H I    I  G   +++T  +         A+           +  +   V Y+     
Sbjct: 206 MHDIACGQIDIGNAATDMTARMSTGVLQ---ANGEVAAEPTIPIE-HIAEAVVYMASLPL 261

Query: 255 SEYVSG 260
           S  V  
Sbjct: 262 SANVLT 267

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  212 bits (541), Expect = 2e-68
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 19/269 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L   V +VTG SSG+G      L +AG  +   AR  +RL++    + +Q     R  A
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESAL-RQRFPGARLFA 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV  +   +    +      G    LVNNAG  G V +  + T+E W+  ++     
Sbjct: 64  SVCDVL-DALQVRAFAEACERTLGCASILVNNAGQ-GRVSTFAETTDEAWSEELQLKFFS 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
                +    ++     + +++ ++S+ A+ + + P  VA ++++AG+  + + ++ E  
Sbjct: 122 VIHPVRAFLPQLESR-ADAAIVCVNSLLAS-QPE-PHMVATSAARAGVKNLVRSMAFEFA 178

Query: 196 VHKIRVNSICPGLFKSEITEGLMKK----------DWLNNVASRTYPLRDFGTT-DPALT 244
              +RVN I  GL +S       +                  ++  PL   G   + A  
Sbjct: 179 PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAA-- 236

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGATLPG 273
             + +L    S Y +G+   V  G +   
Sbjct: 237 RAILFLASPLSAYTTGSHIDVSGGLSRHA 265

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  211 bits (540), Expect = 2e-68
 Identities = 81/254 (31%), Positives = 120/254 (47%), Gaps = 13/254 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V++TG + GLG E       AG R+V A    +   +   E+         A   
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG------DAARYQ 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+      +  V  A E FG +D LVNNAG+S         + E +  +++ NLTG 
Sbjct: 57  HLDVT-IEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGV 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           ++  K V   M+DA   GS++NISS A    G L    +Y +SK G+  ++K  ++ELG 
Sbjct: 115 FIGMKTVIPAMKDAGG-GSIVNISSAAGL-MG-LALTSSYGASKWGVRGLSKLAAVELGT 171

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
            +IRVNS+ PG+  + +T     +    N      P+   G     +   V  L+ D+S 
Sbjct: 172 DRIRVNSVHPGMTYTPMTAETGIRQGEGNYP--NTPMGRVGNEPGEIAGAVVKLLSDTSS 229

Query: 257 YVSGNIFIVDSGAT 270
           YV+G    VD G T
Sbjct: 230 YVTGAELAVDGGWT 243

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  211 bits (540), Expect = 3e-68
 Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 17/263 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV ++TGA SG G       AK G ++V   R     + +  EI         A+AV
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD------AALAV 60

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+S   A ++ +V+ A   FG++D LVNNAG+    ++   +  EE++ I+  N+ G 
Sbjct: 61  AADIS-KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGV 119

Query: 137 WLVSKYVCIRMRDAN---QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           +L++  +    ++     QE  ++N++S  A  R + P    Y ++K  + ++TK L++E
Sbjct: 120 YLMTSKLIPHFKENGAKGQECVILNVASTGAG-RPR-PNLAWYNATKGWVVSVTKALAIE 177

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--RTYPLRDFGTTDPA-LTSLVRYL 250
           L   KIRV ++ P   ++ +    M +D          + P+       P  L     +L
Sbjct: 178 LAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLK--PDDLAEAAAFL 235

Query: 251 VHDSSEYVSGNIFIVDSGATLPG 273
               +  ++G    VD G ++ G
Sbjct: 236 CSPQASMITGVALDVDGGRSIGG 258

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  210 bits (538), Expect = 3e-68
 Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 11/255 (4%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           ++V +VTGASSG G          G R+ A     + L+              + + V  
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--DKVLRVRA 59

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLTGS 136
           DV+ +   +  ++    E FG ID LVNNAG++G  ++ +      E+++ +M  N+ G 
Sbjct: 60  DVA-DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGI 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L  + V   M      G ++NI+S+A+      PG  AY +SK  +  +TK ++++   
Sbjct: 119 FLGCRAVLPHML-LQGAGVIVNIASVASL-VAF-PGRSAYTTSKGAVLQLTKSVAVDYAG 175

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT-TDPALTSLVRYLVHDSS 255
             IR N++CPG+ ++ +T+  + +  L +      P ++ GT    A    V +L  + +
Sbjct: 176 SGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVA--DAVMFLAGEDA 233

Query: 256 EYVSGNIFIVDSGAT 270
            YV+G   ++D   T
Sbjct: 234 TYVNGAALVMDGAYT 248

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  211 bits (540), Expect = 4e-68
 Identities = 73/260 (28%), Positives = 115/260 (44%), Gaps = 19/260 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTGA +G+G      LA  GC ++ A    D   +   +I         A A 
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG------CGAAAC 80

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +DVS +   I   V     AFG +D LV NAGV   + S +D T E+++ ++  NL G+
Sbjct: 81  RVDVS-DEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGA 138

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           WL +K+   RM      G+++N+SS+A        G  AY  SKAG+  +++  + EL  
Sbjct: 139 WLCTKHAAPRMI-ERGGGAIVNLSSLAGQ-VAV-GGTGAYGMSKAGIIQLSRITAAELRS 195

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-----TYPLRDFGTTDPA-LTSLVRYL 250
             IR N++ P    + + +  M        A                  P  +  +V +L
Sbjct: 196 SGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAA--PEEMAGIVVFL 253

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
           + D +  ++G   I D G  
Sbjct: 254 LSDDASMITGTTQIADGGTI 273

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  212 bits (541), Expect = 6e-68
 Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 16/265 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K V++TG+S+G+GR   +  AK G ++    R  DRL+    +I K    + +  AV
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             DV+   +  ++ +      FG+ID LVNNAG + A  +   D   E +    K N   
Sbjct: 84  VADVT-EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              +++     +     +G ++N+SSI A  +    G   YA +KA L+  T+C +++L 
Sbjct: 143 VIEMTQKTKEHLI--KTKGEIVNVSSIVAGPQAH-SGYPYYACAKAALDQYTRCTAIDLI 199

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY-------PLRDFGTT-DPALTSLV 247
            H +RVNS+ PG   +     +   +  ++             P+   G   + A  +++
Sbjct: 200 QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA--NII 257

Query: 248 RYLV-HDSSEYVSGNIFIVDSGATL 271
            +L   + S Y+ G   + D G+TL
Sbjct: 258 VFLADRNLSSYIIGQSIVADGGSTL 282

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  209 bits (535), Expect = 1e-67
 Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 12/256 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD     VTGA SG+G E C   A +G R++   R    L     E+      +  A  +
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARI 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+ +  A+  +  +A EA   +  LVN+AG+   +   L+  +  W  +M  N+ G 
Sbjct: 64  VADVT-DAEAMTAAAAEA-EAVAPVSILVNSAGI-ARLHDALETDDATWRQVMAVNVDGM 120

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  S+     M  A   G+++N+ S++ T   +     +Y +SK  ++ +T+ L+ E   
Sbjct: 121 FWASRAFGRAMV-ARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAG 179

Query: 197 HKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
             +RVN++ PG   +E+T  + +  +        T P+   G     + +   +L   ++
Sbjct: 180 RGVRVNALAPGYVATEMTLKMRERPELFETWLDMT-PMGRCGEPS-EIAAAALFLASPAA 237

Query: 256 EYVSGNIFIVDSGATL 271
            YV+G I  VD G T+
Sbjct: 238 SYVTGAILAVDGGYTV 253

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  209 bits (534), Expect = 2e-67
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 14/259 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
             NK  +VTG+S G+G+   + LA+ G  IV   AR         +EI K      + + 
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV---KVLV 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
           V+ +V    A I+   Q+  E FGR+D  VNNA     V  P+ +L E  W+  M  N  
Sbjct: 59  VKANVG-QPAKIKEMFQQIDETFGRLDVFVNNAAS--GVLRPVMELEETHWDWTMNINAK 115

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
                ++     M      G +++ISS+ +     L        SKA L A+T+ L++EL
Sbjct: 116 ALLFCAQEAAKLMEKNGG-GHIVSISSLGSIRY--LENYTTVGVSKAALEALTRYLAVEL 172

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHD 253
              +I VN++  G   ++  +    ++ L   A +  P        D      V +LV  
Sbjct: 173 SPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMV--DTVEFLVSS 230

Query: 254 SSEYVSGNIFIVDSGATLP 272
            ++ + G   IVD G +L 
Sbjct: 231 KADMIRGQTIIVDGGRSLL 249

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  208 bits (533), Expect = 2e-67
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 17/262 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            KV +VTGA  G+G+   L L K G  +  A       K++  EIN+  G    A+AV++
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG---HAVAVKV 58

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DVS +   +  +V++A +  G  D +VNNAGV+        +T E  + +   N+ G   
Sbjct: 59  DVS-DRDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIW 116

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
             +      +     G +IN  S A    G  P    Y+SSK  +  +T+  + +L    
Sbjct: 117 GIQAAVEAFKKEGHGGKIINACSQAG-HVGN-PELAVYSSSKFAVRGLTQTAARDLAPLG 174

Query: 199 IRVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           I VN  CPG+ K+ +   + ++          +     ++   L      +  + + V Y
Sbjct: 175 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED-VAACVSY 233

Query: 250 LVHDSSEYVSGNIFIVDSGATL 271
           L    S+Y++G   ++D G   
Sbjct: 234 LASPDSDYMTGQSLLIDGGMVF 255

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  208 bits (533), Expect = 4e-67
 Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 19/272 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             NK V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K   S  +  +V
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNL 133
             DV+      +  +    + FG+ID LVNNAG +       +  D   + ++  +K NL
Sbjct: 64  VADVT-TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
                ++K V   +     +G ++N+SSI A  + Q P  + YA +KA L+  T+  +++
Sbjct: 123 QAVIEMTKKVKPHLV--ASKGEIVNVSSIVAGPQAQ-PDFLYYAIAKAALDQYTRSTAID 179

Query: 194 LGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVAS--RTYPLRDFGTT-DPALTS 245
           L    IRVNS+ PG+ ++  T  +       + + N +AS     P+   G     A  +
Sbjct: 180 LAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIA--N 237

Query: 246 LVRYLV-HDSSEYVSGNIFIVDSGATL-PGLP 275
           ++ +L   + S Y+ G   + D G +L  G  
Sbjct: 238 IILFLADRNLSFYILGQSIVADGGTSLVMGTQ 269

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  208 bits (531), Expect = 1e-66
 Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 18/259 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ +V +VTG  SG+GR      AK G  +V A    D    + +EI        +A  V
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS------KAFGV 78

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +DVS +    E+ V+K    +GR+D LVNNAG  G   + + + EE W+ IM  N+ G 
Sbjct: 79  RVDVS-SAKDAESMVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIMSVNVKGI 136

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L SKYV   MR  N  GS+IN +S  AT         AY +SK  ++++T+ ++++   
Sbjct: 137 FLCSKYVIPVMR-RNGGGSIINTTSYTAT-SAI-ADRTAYVASKGAISSLTRAMAMDHAK 193

Query: 197 HKIRVNSICPGLFKSEITEGLMKK----DWLNNVASRTYPLRDFGTT-DPALTSLVRYLV 251
             IRVN++ PG   S     +  +      L +  +    +   GT  + A    + +L 
Sbjct: 194 EGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIA--EAMLFLA 251

Query: 252 HDSSEYVSGNIFIVDSGAT 270
            D S + +G+I  VD G++
Sbjct: 252 SDRSRFATGSILTVDGGSS 270

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  207 bits (530), Expect = 1e-66
 Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 18/260 (6%)

Query: 17  LDNKVVMVTGAS--SGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRA 73
           L  KVV+VTGAS   G+G E     A+ G  +    A R    +    E+ K  G  ++A
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG--IKA 75

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
            A +  V  +  + E  V+     FG+IDA + NAG +      LD + E WNH+++ +L
Sbjct: 76  KAYKCQVD-SYESCEKLVKDVVADFGQIDAFIANAGATADSGI-LDGSVEAWNHVVQVDL 133

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G++  +K V    +     GS++  +S++           +Y  +KAG   M + L+ E
Sbjct: 134 NGTFHCAKAVGHHFK-ERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192

Query: 194 LGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
                 RVNSI PG   + +++ +    ++ W + +     P+   G     L     Y 
Sbjct: 193 WR-DFARVNSISPGYIDTGLSDFVPKETQQLWHSMI-----PMGRDGLAK-ELKGAYVYF 245

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
             D+S Y +G   ++D G T
Sbjct: 246 ASDASTYTTGADLLIDGGYT 265

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  206 bits (527), Expect = 2e-66
 Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 6/205 (2%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +    + ++TGAS G+G      LA  G R+V  AR    L+ + DEI + +      + 
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           + LD++ +    +  ++   + +G +D LVN A +   +   L    + +  IM+ N+  
Sbjct: 64  LPLDIT-DCTKADTEIKDIHQKYGAVDILVNAAAM--FMDGSLSEPVDNFRKIMEINVIA 120

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + + K V   M+   + G + N++S AA  +     G  Y S+K  L  + + L  EL 
Sbjct: 121 QYGILKTVTEIMK-VQKNGYIFNVASRAA--KYGFADGGIYGSTKFALLGLAESLYRELA 177

Query: 196 VHKIRVNSICPGLFKSEITEGLMKK 220
              IRV ++CPG   +++ +     
Sbjct: 178 PLGIRVTTLCPGWVNTDMAKKAGTP 202

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  207 bits (529), Expect = 2e-66
 Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 15/247 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +   K+ +VTGA SG+GR   + LA AG  +  A RR+D L+    EI         A+ 
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG------DDALC 78

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DV+ +  ++        E FGR+D L NNAG         DLT  +W  ++ TNLTG
Sbjct: 79  VPTDVT-DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTG 137

Query: 136 SWLVSKYVCIRMRD-ANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +L ++     M+    + G +IN  SI+ATS    P    Y ++K  +  +TK  SL+ 
Sbjct: 138 PFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR--PYSAPYTATKHAITGLTKSTSLDG 195

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD- 253
            VH I    I  G   + + + +         A  +  +         + S V Y+    
Sbjct: 196 RVHDIACGQIDIGNADTPMAQKMKAGVPQ---ADLSIKVEPVMDVA-HVASAVVYMASLP 251

Query: 254 SSEYVSG 260
               V  
Sbjct: 252 LDANVQF 258

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  206 bits (528), Expect = 2e-66
 Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 25/269 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K V+VTG + G+GR      A+ G  +                  K+   ++     
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL---------RPEGKEVAEAIGGAFF 54

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           ++D+  +       V++A  A GR+D LVNNA ++    S L +   EW  +++ NLT  
Sbjct: 55  QVDLE-DERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAP 112

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +S      MR     G+++N++S+      +     AY +SK GL  +T+ L+L+L  
Sbjct: 113 MHLSALAAREMRKVGG-GAIVNVASVQGL-FAE-QENAAYNASKGGLVNLTRSLALDLAP 169

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY----PLRDFGTT-DPALTSLVRYLV 251
            +IRVN++ PG   +E     +          R +     LR  G   + A    V +L 
Sbjct: 170 LRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVA--EAVLFLA 227

Query: 252 HDSSEYVSGNIFIVDSGAT----LPGLPI 276
            + + +++G I  VD G T    + G P+
Sbjct: 228 SEKASFITGAILPVDGGMTASFMMAGRPV 256

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  207 bits (528), Expect = 3e-66
 Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 16/266 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KV ++TG + G+G        + G ++V A    D  + +C+ I    GS      V
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI----GSPDVISFV 69

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             DV+     + N V       G++D +  N GV       + +   E++  +M  N+ G
Sbjct: 70  HCDVT-KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 128

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++LV+K+    M  A + GS++  +SI++           Y ++K  +  +T  L  ELG
Sbjct: 129 AFLVAKHAARVMIPAKK-GSIVFTASISS-FTAGEGVSHVYTATKHAVLGLTTSLCTELG 186

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD---WLNNVASRTYPLRDFGTT-DPALTSLVRYLV 251
            + IRVN + P +  S +   +   D                      D A    V YL 
Sbjct: 187 EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVA--DAVAYLA 244

Query: 252 HDSSEYVSGNIFIVDSG--ATLPGLP 275
            D S+YVSG   ++D G   T P  P
Sbjct: 245 GDESKYVSGLNLVIDGGYTRTNPAFP 270

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  206 bits (526), Expect = 3e-66
 Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 20/264 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTG S G+G      L KAG  +  A   V   +++   +           AV
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN------GGFAV 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           E+DV+   A+++ ++QKA +A G  D L  NAGVS  ++  +D+T+EEW+     N  G 
Sbjct: 64  EVDVT-KRASVDAAMQKAIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGV 121

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L ++  C     +N +G ++N +S+AA   G  P    Y++SK  +   T+ L+ E+  
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAK-VGA-PLLAHYSASKFAVFGWTQALAREMAP 179

Query: 197 HKIRVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPALTSLV 247
             IRVN +CPG  K+ + E  +           + +        PL      +  +  +V
Sbjct: 180 KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPED-VADVV 238

Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            +L  D++ +++G    V  G  +
Sbjct: 239 VFLASDAARFMTGQGINVTGGVRM 262

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  205 bits (524), Expect = 6e-66
 Identities = 63/257 (24%), Positives = 104/257 (40%), Gaps = 13/257 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L +K+ ++TG ++G+GR      A  G  I  A             I        R + 
Sbjct: 4   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADL--VPAPEAEAAIRNLGR---RVLT 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DVS     +E   ++    FGR D LVNNAG+        +LT E+W    + N+  
Sbjct: 59  VKCDVS-QPGDVEAFGKQVISTFGRCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDS 116

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L++K     M+     G +IN++S              Y S+KA     T+ L+ +LG
Sbjct: 117 GFLMAKAFVPGMKRNGW-GRIINLTSTTYW-LKI-EAYTHYISTKAANIGFTRALASDLG 173

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDS 254
              I VN+I P L ++  TE        + + +    +       D        +L  D 
Sbjct: 174 KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLT--GAAAFLASDD 231

Query: 255 SEYVSGNIFIVDSGATL 271
           + +++G    VD G   
Sbjct: 232 ASFITGQTLAVDGGMVR 248

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  205 bits (524), Expect = 6e-66
 Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 19/254 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +V+G + G+G      +   G ++V      +  K++  E+         A  V
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYV 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+   A  + +V  A  AFG +  LVNNAG+   + +  D    EW  I+  NLTG 
Sbjct: 59  HLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGV 116

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L  + V   M+     GS+INISSI     G       Y ++K  +  +TK  +LELG 
Sbjct: 117 FLGIRAVVKPMK-EAGRGSIINISSIEGL-AGT-VACHGYTATKFAVRGLTKSTALELGP 173

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             IRVNSI PGL K+ +T+ + +             L         +++LV YL  D S 
Sbjct: 174 SGIRVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPV-EVSNLVVYLASDESS 225

Query: 257 YVSGNIFIVDSGAT 270
           Y +G  F+VD G  
Sbjct: 226 YSTGAEFVVDGGTV 239

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  205 bits (524), Expect = 8e-66
 Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 14/260 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAM 74
           +  N+ ++V GA   +GR   +  A+ G  +V       +   +   EI ++ G    A+
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEI-EKLG--RSAL 61

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           A++ D++ N A +E ++  A + FG I  LV+ AG   A K+  ++ E  W+ ++  NLT
Sbjct: 62  AIKADLT-NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             +L +K    +M      G+++  SS A    G  PG +AYA+SK  +   T+ L+ E+
Sbjct: 121 SLFLTAKTALPKMAKG---GAIVTFSSQAGR-DGGGPGALAYATSKGAVMTFTRGLAKEV 176

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHD 253
           G  KIRVN++CPG+  +   +   K +    VA  T  L+  G++ D A   LV +L  D
Sbjct: 177 G-PKIRVNAVCPGMISTTFHDTFTKPEVRERVAGAT-SLKREGSSEDVA--GLVAFLASD 232

Query: 254 SSEYVSGNIFIVDSGATLPG 273
            + YV+G  + ++ G     
Sbjct: 233 DAAYVTGACYDINGGVLFSE 252

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  204 bits (522), Expect = 1e-65
 Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 17/260 (6%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAA--ARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +KV MVTG + G+GR     LA  G  I  A   ++ ++       I        +A+ V
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQ---KAVFV 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+ + A  ++++ +A E  G  D LVNNAG++  +K  L++TEE+   I   N+   
Sbjct: 59  GLDVT-DKANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSV 116

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +   +    +  +   +G +IN +SIAA  +G  P   AY+++K  +  +T+  + EL  
Sbjct: 117 FFGIQAASRKFDELGVKGKIINAASIAAI-QGF-PILSAYSTTKFAVRGLTQAAAQELAP 174

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA--------LTSLVR 248
               VN+  PG+  + + E +  +    N        +++ ++           +  LV 
Sbjct: 175 KGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVS 234

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L  ++S YV+G + +VD G
Sbjct: 235 FLASENSNYVTGQVMLVDGG 254

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  205 bits (524), Expect = 1e-65
 Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 30/277 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA------------ARRVDRLKSLCDEI 63
            L  KV  +TGA+ G GR   + LA  G  I+A                 + L +    +
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 64  NKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
                   R +A + DV  +  ++  ++Q   +  GR+D +V NAG++     P+   ++
Sbjct: 70  EDIGS---RIVARQADVR-DRESLSAALQAGLDELGRLDIVVANAGIA-----PMSAGDD 120

Query: 124 EWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT--SRGQLPGGVAYASSKA 181
            W+ ++  NLTG +   K     +      GS++ ISS A         PG V Y ++K 
Sbjct: 121 GWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKH 180

Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP 241
           G+  + +  +  L    IRVNSI P   ++ +      ++WL  +A+ T      G   P
Sbjct: 181 GVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP 240

Query: 242 A-------LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
                   + + V +LV D + Y++G    VD+G   
Sbjct: 241 VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  203 bits (520), Expect = 3e-65
 Identities = 74/248 (29%), Positives = 110/248 (44%), Gaps = 18/248 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V +VTGAS G+G      L   G R+V  AR V++L+++  EI    G    A + 
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG---EAESH 83

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+S +  AI         A GR D LVNNAGV         +   EW+ ++  NL   
Sbjct: 84  ACDLS-HSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAP 142

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L+ +     M  A + G +INISS+A         G AY +SK GLN +    + EL  
Sbjct: 143 YLLLRAFAPAMI-AAKRGHIINISSLAGK-NPV-ADGAAYTASKWGLNGLMTSAAEELRQ 199

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           H++RV+ + PG  ++E   GL  K            L      D A   +V  L   + +
Sbjct: 200 HQVRVSLVAPGSVRTEFGVGLSAKKS---------ALGAIEPDDIA--DVVALLATQADQ 248

Query: 257 YVSGNIFI 264
                + +
Sbjct: 249 SFISEVLV 256

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  203 bits (519), Expect = 4e-65
 Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 22/262 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  K V++TG+S G+G       A+AG ++     +    +      +    G    A  
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG---DAAF 61

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              D++    A +  V +    FG ID L+NNAG     K   ++ +  ++ +M  N+  
Sbjct: 62  FAADLA-TSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120

Query: 136 SWLVSKYVCIRMRDANQE----GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
             + +K+    +  A +      +VI+  SIA    G  PG   Y ++KA L+ + K   
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAG-HTGGGPGAGLYGAAKAFLHNVHKNWV 179

Query: 192 LELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLV 247
                  +R N + PG   +         ++    N +     P+  FGT  + A     
Sbjct: 180 DFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGI-----PMGRFGTAEEMA--PAF 232

Query: 248 RYLV-HDSSEYVSGNIFIVDSG 268
            +   H +S Y++G +  ++ G
Sbjct: 233 LFFASHLASGYITGQVLDINGG 254

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  203 bits (519), Expect = 5e-65
 Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 25/264 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K ++VTGA+SG+GR      A+ G  +VA  R    L      +         A+A
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIA 56

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DVS +  A+E    +A E FGR+  + + AGV+ +  S  +L  E W  +++ NLTG
Sbjct: 57  VVADVS-DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS-WNLPLEAWEKVLRVNLTG 114

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           S+LV++     + +    GS++   S+A        G   YA+ K G+  + + L+LEL 
Sbjct: 115 SFLVARKAGEVLEEG---GSLVLTGSVAGLGA---FGLAHYAAGKLGVVGLARTLALELA 168

Query: 196 VHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLV 251
              +RVN + PGL ++ +T GL     +  +        PL   G   + A      +L+
Sbjct: 169 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGAS-----PLGRAGRPEEVA--QAALFLL 221

Query: 252 HDSSEYVSGNIFIVDSGATLPGLP 275
            + S Y++G    VD G ++ G P
Sbjct: 222 SEESAYITGQALYVDGGRSIVGPP 245

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  203 bits (519), Expect = 7e-65
 Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 34/284 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA----------------ARRVDRLKSL 59
           +++ KV  VTGA+ G GR   + LA+ G  I+A                 A   + L   
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 60  CDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLD 119
            D +   +    R +  E+DV  +  A++ +V    E  GR+D +V NAG+     +   
Sbjct: 68  ADLVKGHNR---RIVTAEVDVR-DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK 123

Query: 120 LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS 179
            +EE+W  ++  NL G W   K     M    + GS+I  SS+    +   P    Y ++
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL-KAY-PHTGHYVAA 181

Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPG-----LFKSEITEGLMKKDWLNNVASRTYPLR 234
           K G+  + +   +ELG H IRVNS+ P      +  +E T  + + D  N       P+ 
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC 241

Query: 235 DFGTTDPA-------LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
               T P        +++ V +   D + Y++G    +D+G+ L
Sbjct: 242 QMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  202 bits (517), Expect = 9e-65
 Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 18/265 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            +  KV ++TG+SSG+G       AK G  IV  AR+VDRL      + ++ G  VR + 
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLE 61

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V +DV+     ++  V+    +FG  D LVNNAG     ++ ++  +E+W    +  +  
Sbjct: 62  VAVDVA-TPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQFYWELLVMA 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  +++ +   MR     G++I+ +SI A     L     Y  +KA L   +K L+ E+ 
Sbjct: 120 AVRLARGLVPGMRARG-GGAIIHNASICA--VQPLWYEPIYNVTKAALMMFSKTLATEVI 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKK----------DWLNNVASRTYPLRDFGTTDPALTS 245
              IRVN I PGL  +       K+           +L +VA    P++ F + +  L +
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE-ELAN 235

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGAT 270
              +L  + + Y  G+ + VD G  
Sbjct: 236 FFVFLCSERATYSVGSAYFVDGGML 260

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  201 bits (515), Expect = 1e-64
 Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 18/263 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTG +SG+G E    L   G ++  +       + L  E+ +      R+M V
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE------RSMFV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS + A     +       G ++ LVNNAG+            E+++ ++K N    
Sbjct: 58  RHDVS-SEADWTLVMAAVQRRLGTLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESV 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           ++  +     M++    GS+IN++S+++     +     Y++SKA ++A+T+  +L    
Sbjct: 116 FIGCQQGIAAMKE--TGGSIINMASVSSW-LP-IEQYAGYSASKAAVSALTRAAALSCRK 171

Query: 197 H--KIRVNSICPGLFKSEITEGLMKKDWLNNVA---SRTYPLRDFGTTDPALTSLVRYLV 251
               IRVNSI P    + + +  + K     +     +          +  +  LV +L 
Sbjct: 172 QGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLFLA 230

Query: 252 HDSSEYVSGNIFIVDSGATLPGL 274
            D S  +SG+    D+     GL
Sbjct: 231 SDESSVMSGSELHADNSILGMGL 253

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  201 bits (514), Expect = 1e-64
 Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 16/248 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V++VTGA+ G+G       A  G  +V   R    L  + D+I          +A+
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            L+  A          +    FGR+D L++NA + G       L +E++  +M  N+  +
Sbjct: 72  NLEN-ATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNAT 130

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL-G 195
           +++++ +   ++  +++ S+   SS     R       AY  SK     + + L+ EL G
Sbjct: 131 FMLTRALLPLLK-RSEDASIAFTSSSVG--RKGRANWGAYGVSKFATEGLMQTLADELEG 187

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
           V  +R NSI PG  ++ +       +          PL +    D     +  YL+   S
Sbjct: 188 VTAVRANSINPGATRTGMRAQAYPDEN---------PLNNPAPEDIM--PVYLYLMGPDS 236

Query: 256 EYVSGNIF 263
             ++G   
Sbjct: 237 TGINGQAL 244

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  202 bits (516), Expect = 2e-64
 Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 29/276 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-------------ARRVDRLKSLCDE 62
           +L+ +V  +TGA+ G GR   + +A  G  I+A                  D L      
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 63  INKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE 122
           +   +    R +A  +D   +   +   V     A GR+D +V NAGV  A ++  D+T 
Sbjct: 68  VEAANR---RIVAAVVDTR-DFDRLRKVVDDGVAALGRLDIIVANAGV-AAPQAWDDITP 122

Query: 123 EEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAG 182
           E++  +M  N+TG+W        R+ +  + GS+I ISS A   + Q P  + Y +SK  
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM-KMQ-PFMIHYTASKHA 180

Query: 183 LNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLR 234
           +  + +  + ELG H IRVNS+ PG   + +  G M       + +          +   
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240

Query: 235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
                +  +   V +L  D S  V+     VD G+T
Sbjct: 241 WVAEPE-DIADTVCWLASDESRKVTAAQIPVDQGST 275

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  202 bits (515), Expect = 2e-64
 Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 19/260 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L+ K+ ++TGA+SG+G          G R+    RR D L +   EI         A+ 
Sbjct: 26  RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG------GAVG 79

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           ++ D + N A ++   +K     GRID L  NAG  G++    ++TEE+++     N+ G
Sbjct: 80  IQADSA-NLAELDRLYEKVKAEAGRIDVLFVNAGG-GSMLPLGEVTEEQYDDTFDRNVKG 137

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
                +     +       SV+   S A +  G  P    YA+SKA L +  +   L+L 
Sbjct: 138 VLFTVQKALPLLARG---SSVVLTGSTAGS-TG-TPAFSVYAASKAALRSFARNWILDLK 192

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-----TYPLRDFGTTDPALTSLVRYL 250
              IR+N++ PG  ++     L  KD +             P+   G  +  + +   +L
Sbjct: 193 DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAE-EVAAAALFL 251

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
             D S +V+G    VD G+ 
Sbjct: 252 ASDDSSFVTGAELFVDGGSA 271

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  202 bits (515), Expect = 3e-64
 Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 14/264 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAM 74
           Q    V +VTG   G+G      LA +G  I +      + +  +  E++       R +
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA---RVI 82

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNL 133
            +  D++ + ++ + +V      FGRID LVNNAG++  V+    DL  E ++ I+  NL
Sbjct: 83  FLRADLA-DLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNL 141

Query: 134 TGSWLVSKYVCIRMRDANQE--GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
            G+   ++ V   M  ++     S+INI+S++A      P  + Y  SKAGL A ++ L+
Sbjct: 142 RGTVFFTQAVLKAMLASDARASRSIINITSVSAV-MTS-PERLDYCMSKAGLAAFSQGLA 199

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
           L L    I V  + PG+ +S++T  +  K      +    P+R +G   D    ++V  L
Sbjct: 200 LRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLV-PMRRWGEPEDIG--NIVAGL 256

Query: 251 VHDSSEYVSGNIFIVDSGATLPGL 274
                 + +G++   D G ++  L
Sbjct: 257 AGGQFGFATGSVIQADGGLSIGRL 280

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  202 bits (516), Expect = 4e-64
 Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 32/281 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA------------ARRVDRLKSLCDEI 63
           +++ KV  +TGA+ G GR   + LA+ G  I+A                 D L     ++
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84

Query: 64  NKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
                   R +A ++DV  +  A++ +V       GR+D ++ NA ++        +  +
Sbjct: 85  EALGR---RIIASQVDVR-DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPK 140

Query: 124 EWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
            W  ++  NL G+W+ ++     +    + GS++  SSI    RG       Y +SK GL
Sbjct: 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL-RGA-ENIGNYIASKHGL 198

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL 243
           + + + ++LELG   IRVN +CP    + +                   + DF      +
Sbjct: 199 HGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENP-TVEDFQVASRQM 257

Query: 244 TSL-------------VRYLVHDSSEYVSGNIFIVDSGATL 271
             L             + +LV D + Y++G    VD GA L
Sbjct: 258 HVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  200 bits (511), Expect = 4e-64
 Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 23/260 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV+++T A+ G+G+   L  A+ G +++A      +L+ L                 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--------IQTR 55

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+      +  + +      R+D L N AG      + LD  E++W+  M  N+   
Sbjct: 56  VLDVTK-----KKQIDQFANEVERLDVLFNVAGF-VHHGTVLDCEEKDWDFSMNLNVRSM 109

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L+ K    +M  A + G++IN+SS+A++ +G +     Y+++KA +  +TK ++ +   
Sbjct: 110 YLMIKAFLPKML-AQKSGNIINMSSVASSVKG-VVNRCVYSTTKAAVIGLTKSVAADFIQ 167

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVA----SRTYPLRDFGTT-DPALTSLVRYLV 251
             IR N +CPG   +   +  ++       A     +      F T  + A   L  YL 
Sbjct: 168 QGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIA--MLCVYLA 225

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            D S YV+GN  I+D G +L
Sbjct: 226 SDESAYVTGNPVIIDGGWSL 245

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  199 bits (509), Expect = 8e-64
 Identities = 46/255 (18%), Positives = 90/255 (35%), Gaps = 19/255 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            L NK V+   A  G+G +   +L K   +      RV+   +L +         V    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK--VNITF 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV+   A  +  ++K ++    +D L+N AG+         L + +    +  N TG
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQIERTIAINFTG 110

Query: 136 SWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
               +  +            G + NI S+       +     Y++SKA + + T  L+  
Sbjct: 111 LVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNAIHQVPVYSASKAAVVSFTNSLAKL 168

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
             +  +   SI PG+ ++ +         +    +         T++       +  V  
Sbjct: 169 APITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSE----QCGQNFVKA 224

Query: 254 SSEYVSGNIFIVDSG 268
                +G I+ +D G
Sbjct: 225 IEANKNGAIWKLDLG 239

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  199 bits (509), Expect = 2e-63
 Identities = 81/274 (29%), Positives = 125/274 (45%), Gaps = 28/274 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-------------ARRVDRLKSLCDEI 63
           L  +V  +TGA+ G GR   + LA  G  I+A                  + L      +
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 64  NKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
             Q     +A+   LDV  + AA+   V    E FGR+D +V NAGV  +     +LT+E
Sbjct: 73  EDQGR---KALTRVLDVR-DDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDE 127

Query: 124 EWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
           +W+ ++  NLTG+W   +     M +A   GS++ +SS A   +   PG   Y++SK GL
Sbjct: 128 QWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL-KAT-PGNGHYSASKHGL 185

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL-------NNVASRTYPLRDF 236
            A+T  L++ELG + IRVNSI P   ++ + E     +         ++          F
Sbjct: 186 TALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGF 245

Query: 237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
            T D  +  +V +L  D S  ++G    VD GA 
Sbjct: 246 MTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  198 bits (506), Expect = 3e-63
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 29/258 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +   KVV++TGAS G+G            R+VA +R +               +      
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP------------SADPDIHT 72

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  D+S      +  V++  E FGRID+LVNNAGV  A K  +++T+E+++H +  N+ G
Sbjct: 73  VAGDIS-KPETADRIVREGIERFGRIDSLVNNAGVFLA-KPFVEMTQEDYDHNLGVNVAG 130

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATS--RGQLPGGVAYASSKAGLNAMTKCLSLE 193
            + +++     M      G +++I++        G        + +K GLNA+T+ L++E
Sbjct: 131 FFHITQRAAAEMLKQGS-GHIVSITTSLVDQPMVGM--PSALASLTKGGLNAVTRSLAME 187

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVH 252
                +RVN++ PG+ K+ +                  P+   G   D      V YL  
Sbjct: 188 FSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLH-----PVGRMGEIRDVV--DAVLYL-- 238

Query: 253 DSSEYVSGNIFIVDSGAT 270
           + + +++G I  VD G  
Sbjct: 239 EHAGFITGEILHVDGGQN 256

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  197 bits (503), Expect = 5e-63
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 20/252 (7%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            +  +VTG S G+GR     L   G R+  A+R  +               S+ A+ +  
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ-----------SLGAVPLPT 50

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSW 137
           D+       +  V++A EA G +  LV+ A V   V+ P L+L+ EEW  ++  +L  ++
Sbjct: 51  DLEK--DDPKGLVKRALEALGGLHVLVHAAAV--NVRKPALELSYEEWRRVLYLHLDVAF 106

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L+++     M      G V+ I S+   + G      AY ++K  L  +T+ L+ E    
Sbjct: 107 LLAQAAAPHMA-EAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARL 165

Query: 198 KIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
            IRVN +CPG  ++E T  L +  +    + +R  P+  +   +  +  +   L  D +E
Sbjct: 166 GIRVNLLCPGYVETEFTLPLRQNPELYEPITARI-PMGRWARPE-EIARVAAVLCGDEAE 223

Query: 257 YVSGNIFIVDSG 268
           Y++G    VD G
Sbjct: 224 YLTGQAVAVDGG 235

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  198 bits (505), Expect = 6e-63
 Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 27/260 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            + KV +VTGA+ G+G      L  AG R+  A R V  +                 + +
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------------ADLHL 71

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+    A  +          GR+D +VNNAGV        + T+ +W+  +  N+   
Sbjct: 72  PGDLR-EAAYADGLPGAVAAGLGRLDIVVNNAGVISR-GRITETTDADWSLSLGVNVEAP 129

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + + +     M  A   G+++N++S     R   PG   Y  +KA L ++T+C+ ++   
Sbjct: 130 FRICRAAIPLMAAAGG-GAIVNVASCWGL-RP-GPGHALYCLTKAALASLTQCMGMDHAP 186

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-----TYPLRDFGTT-DPALTSLVRYL 250
             IR+N++CP    + +      K   +   +      T PL       D A   +V +L
Sbjct: 187 QGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIA--DVVLFL 244

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
             D++ Y+ G++  V+ G  
Sbjct: 245 ASDAARYLCGSLVEVNGGKA 264

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  198 bits (505), Expect = 7e-63
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 12/256 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
            D  VV+VTG S G+G   C   A+ G R+    A   +   ++   I +  G    A+A
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG---EAVA 80

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  DV  N A I          FGR+D LVNNAG+    +   +++ E    +++ N+TG
Sbjct: 81  IPGDVG-NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTG 139

Query: 136 SWLVSKYVCIRM--RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           S L +     RM    + Q G+++N+SS+AA   G     V YA+SKA ++  T  L+ E
Sbjct: 140 SILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI-LGSATQYVDYAASKAAIDTFTIGLARE 198

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVH 252
           +    IRVN++ PG+ ++++       D    +A    P++  G   + A    + YL+ 
Sbjct: 199 VAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV-PMQRAGMPEEVA--DAILYLLS 255

Query: 253 DSSEYVSGNIFIVDSG 268
            S+ YV+G+I  V  G
Sbjct: 256 PSASYVTGSILNVSGG 271

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  198 bits (505), Expect = 9e-63
 Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 15/260 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  ++ +VTG S G+G+     L +AG R+   AR  +        ++          A+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG----DCQAI 82

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS-GAVKSPLDLTEEEWNHIMKTNLTG 135
             D+S + A      Q   E   R+D LVNNAG S GA  +        W  +M+ N+T 
Sbjct: 83  PADLS-SEAGARRLAQALGELSARLDILVNNAGTSWGA--ALESYPVSGWEKVMQLNVTS 139

Query: 136 SWLVSKYVCIRMR---DANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
            +   + +   +R    A     VINI S+A           AY  SKA L+ +++ L+ 
Sbjct: 140 VFSCIQQLLPLLRRSASAENPARVINIGSVAGI-SAMGEQAYAYGPSKAALHQLSRMLAK 198

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           EL    I VN I PG F S +T  +      L   ++   P+  +G  +  + +L   L 
Sbjct: 199 ELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASI-PMGRWGRPEE-MAALAISLA 256

Query: 252 HDSSEYVSGNIFIVDSGATL 271
             +  Y++GN+  +D G  L
Sbjct: 257 GTAGAYMTGNVIPIDGGFHL 276

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  197 bits (502), Expect = 2e-62
 Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 32/265 (12%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KVV+VTGAS G+GR         G +++               I+    +  +   +
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDL------------SIHDPGEA--KYDHI 51

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           E DV+ N   ++ S+   ++ +G I  LVNNAG+         ++  EW  I+  NL G 
Sbjct: 52  ECDVT-NPDQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGY 109

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  SK+    M   +++ S++NISS+ A S        AY +SK  +  +TK ++L+   
Sbjct: 110 YYASKFAIPYMI-RSRDPSIVNISSVQA-SIIT-KNASAYVTSKHAVIGLTKSIALDYA- 165

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVAS---------RTYPLRDFGTT-DPALTSL 246
             +R N++CP    + +     + +  ++              +P++  G   + A  S 
Sbjct: 166 PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVA--SA 223

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATL 271
           V +L    + +++G    VD G ++
Sbjct: 224 VAFLASREASFITGTCLYVDGGLSI 248

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  196 bits (501), Expect = 2e-62
 Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 21/262 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTG + G+GR      A+AG  +  A R    + +   ++++      + + V
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS--GKVIGV 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLT 134
           + DVS + A  +    +A E FG ID +  NAGV           +T E+ N I   N+ 
Sbjct: 66  QTDVS-DRAQCDALAGRAVEEFGGIDVVCANAGVF---PDAPLATMTPEQLNGIFAVNVN 121

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++   +     +  +   G V+  SSI     G  PG   Y ++KA      +  ++EL
Sbjct: 122 GTFYAVQACLDALIASGS-GRVVLTSSITGPITGY-PGWSHYGATKAAQLGFMRTAAIEL 179

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
             HKI VN+I PG   +E               ++     P    GT  D     L  +L
Sbjct: 180 APHKITVNAIMPGNIMTEGLLENGEEYIASMARSI-----PAGALGTPEDIG--HLAAFL 232

Query: 251 VHDSSEYVSGNIFIVDSGATLP 272
               + Y++G    VD G  LP
Sbjct: 233 ATKEAGYITGQAIAVDGGQVLP 254

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  196 bits (500), Expect = 3e-62
 Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 28/266 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           ++ KV +VTGA+ G+GR F   L   G ++      ++        +++Q     + + +
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFI 63

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + DV+ +   + ++ +K  + FGR+D LVNNAGV+          E+ W   ++ NL   
Sbjct: 64  QCDVA-DQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSV 113

Query: 137 WLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC--LSL 192
              +      M   N  + G +IN+SS+A      +     Y +SK G+   T+   L+ 
Sbjct: 114 ISGTYLGLDYMSKQNGGEGGIIINMSSLAGL-MP-VAQQPVYCASKHGIVGFTRSAALAA 171

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS------RTYPLRDFGTT-DPALTS 245
            L    +R+N+ICPG   + I E + K++ +                         A  +
Sbjct: 172 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA--N 229

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATL 271
            +  L+    + ++G I  + +   +
Sbjct: 230 GLITLI--EDDALNGAIMKITTSKGI 253

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  196 bits (500), Expect = 4e-62
 Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 31/264 (11%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             +KV +VTG SSG+G      L + G ++V+ +       ++             +   
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV-------------SDHF 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           ++DV+ N   ++ +V+K  + +GRID LVNNAG+            E W  I+  N+ GS
Sbjct: 59  KIDVT-NEEEVKEAVEKTTKKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGS 116

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L++KY    M  A   GS+INI+S+ +          AY +SK  L  +T+ ++++   
Sbjct: 117 YLMAKYTIPVML-AIGHGSIINIASVQSY-AAT-KNAAAYVTSKHALLGLTRSVAIDYA- 172

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVAS---------RTYPLRDFGTT-DPALTSL 246
            KIR N++CPG   + +     K +   +  +         R +P+   G   + A   +
Sbjct: 173 PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVA--EV 230

Query: 247 VRYLVHDSSEYVSGNIFIVDSGAT 270
           V +L  D S +++G    VD G  
Sbjct: 231 VAFLASDRSSFITGACLTVDGGLL 254

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  194 bits (496), Expect = 5e-62
 Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 25/254 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +    ++VTGA SGLGR   + L + G ++    RR  RL+     +          + +
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN------AVIGI 54

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             D++ +   ++ +   A E  G  + +++ AG       P+   T E+   +M++NL  
Sbjct: 55  VADLA-HHEDVDVAFAAAVEWGGLPELVLHCAGT--GEFGPVGVYTAEQIRRVMESNLVS 111

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           + LV++     + +  + G + N+ S AA  +        Y +SK G+    + L  EL 
Sbjct: 112 TILVAQQTVRLIGE--RGGVLANVLSSAA--QVGKANESLYCASKWGMRGFLESLRAELK 167

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              +R+ ++ P   +SE  +            +       F T + A   ++  L   SS
Sbjct: 168 DSPLRLVNLYPSGIRSEFWDN-----------TDHVDPSGFMTPEDAAAYMLDALEARSS 216

Query: 256 EYVSGNIFIVDSGA 269
            +V+      + G 
Sbjct: 217 CHVTDLFIGRNEGH 230

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  194 bits (496), Expect = 7e-62
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 18/256 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  K  +VTGA+ G+G+     LA  G  ++ +    +  K+    I        +A A
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG------KKARA 56

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNL 133
           +  D+S +  +++    +     G ID LVNNA +    A     D+  + W  I+  NL
Sbjct: 57  IAADIS-DPGSVKALFAEIQALTGGIDILVNNASIVPFVAW---DDVDLDHWRKIIDVNL 112

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           TG+++V++    +MR A + G VI+I+S    + G  P   AY ++K G+   T+ L+ E
Sbjct: 113 TGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-GT-PNMAAYVAAKGGVIGFTRALATE 170

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVH 252
           LG + I  N++ PGL +S+  +     +    V      ++  G     A   +V +L  
Sbjct: 171 LGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQ-AMKGKGQPEHIA--DVVSFLAS 227

Query: 253 DSSEYVSGNIFIVDSG 268
           D + +++G    VD+G
Sbjct: 228 DDARWITGQTLNVDAG 243

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  195 bits (499), Expect = 8e-62
 Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 21/262 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTG + G+GR      A+AG  +  AAR    L S+  E+ +        + V
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA--GNVIGV 96

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL--DLTEEEWNHIMKTNLT 134
            LDVS +  +  ++ +   +AFG +D +  NAG+           +T E+ + ++  N+ 
Sbjct: 97  RLDVS-DPGSCADAARTVVDAFGALDVVCANAGI---FPEARLDTMTPEQLSEVLDVNVK 152

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G+    +     +  + + G VI  SSI     G  PG   Y +SKA      +  ++EL
Sbjct: 153 GTVYTVQACLAPLTASGR-GRVILTSSITGPVTGY-PGWSHYGASKAAQLGFMRTAAIEL 210

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
               + VN+I PG   +E    +          ++     P+   G+  D     L  +L
Sbjct: 211 APRGVTVNAILPGNILTEGLVDMGEEYISGMARSI-----PMGMLGSPVDIG--HLAAFL 263

Query: 251 VHDSSEYVSGNIFIVDSGATLP 272
             D + Y++G   +VD G  LP
Sbjct: 264 ATDEAGYITGQAIVVDGGQVLP 285

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  195 bits (498), Expect = 8e-62
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 19/266 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAM 74
            +  K  ++TG++SG+G      LAKAG  IV       D ++++ DE+   S      +
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS--GTVL 79

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
               D++   + I + +    + FG  D LVNNAGV   V+   D   E+W+ I+  NL+
Sbjct: 80  HHPADMT-KPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLS 137

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            S+   +     M+     G +INI+S         P   AY ++K G+  +TK ++LE+
Sbjct: 138 SSFHTIRGAIPPMKKKGW-GRIINIASAHGL-VAS-PFKSAYVAAKHGIMGLTKTVALEV 194

Query: 195 GVHKIRVNSICPGLFKSEITE----------GLMKKDWLNNVASRTYPLRDFGTTDPALT 244
               + VNSICPG   + + E          G+ ++  +N V  +  P + F T +  + 
Sbjct: 195 AESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE-QVA 253

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGAT 270
           SL  YL  D +  ++G    +D G T
Sbjct: 254 SLALYLAGDDAAQITGTHVSMDGGWT 279

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  194 bits (495), Expect = 9e-62
 Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 33/262 (12%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
               +VTG S G+G+     L +     V                 +QS S+     ++ 
Sbjct: 4   MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDI------------QQSFSAENLKFIKA 51

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           D++     I N +          D +  NAG+     S  D+  E    ++  N+  S  
Sbjct: 52  DLT-KQQDITNVLDII--KNVSFDGIFLNAGI-LIKGSIFDIDIESIKKVLDLNVWSSIY 107

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
             K +   ++      S++   S         P   AY  SK  +  MTK L+L+L  ++
Sbjct: 108 FIKGLENNLKVG---ASIVFNGSDQC-FIA-KPNSFAYTLSKGAIAQMTKSLALDLAKYQ 162

Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVAS---------RTYPLRDFGTT-DPALTSLVR 248
           IRVN++CPG   +++   L++K   N   S         + +PL       + A   LV 
Sbjct: 163 IRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIA--ELVI 220

Query: 249 YLVHDSSEYVSGNIFIVDSGAT 270
           +L+ D S++++G +  +D G T
Sbjct: 221 FLLSDKSKFMTGGLIPIDGGYT 242

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  195 bits (497), Expect = 1e-61
 Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 26/272 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  +V ++TG +SGLGR         G R+    +  +RL+ L             A+ 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG------GNAVG 55

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE----EWNHIMKT 131
           V  DV  +    + + ++   AFG+ID L+ NAG+     +  DL E+     ++ I   
Sbjct: 56  VVGDVR-SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHV 114

Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           N+ G     K     +   +  GSV+   S A        GG  Y ++K  +  + + ++
Sbjct: 115 NVKGYIHAVKACLPALV--SSRGSVVFTISNAGF-YPN-GGGPLYTATKHAVVGLVRQMA 170

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS--------RTYPLRDFGTTDPAL 243
            EL    +RVN + PG   +++           +++S           P+      +   
Sbjct: 171 FELA-PHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE-EY 228

Query: 244 TSLVRYLV-HDSSEYVSGNIFIVDSGATLPGL 274
           T    +      S   +G +   D G  + G 
Sbjct: 229 TGAYVFFATRGDSLPATGALLNYDGGMGVRGF 260

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  194 bits (495), Expect = 1e-61
 Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 26/261 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIV--AAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           KV++VTG S G+G+     L       V    AR    LK L ++         R   V 
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGD------RFFYVV 56

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            D++   + ++  V  A +  G+ID+LV NAGV   V++  ++    W  +   N     
Sbjct: 57  GDIT-EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIV 115

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            +       ++     G+V+ +SS A           AY SSKA LN     L+ E    
Sbjct: 116 SLVGIALPELK--KTNGNVVFVSSDACNM--YFSSWGAYGSSKAALNHFAMTLANEE--R 169

Query: 198 KIRVNSICPGLFKSEITEGL--------MKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           +++  ++ PG+  +++   +        M  + L          +   ++ PA  ++   
Sbjct: 170 QVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPA--TVYAK 227

Query: 250 LV-HDSSEYVSGNIFIVDSGA 269
           L  H   + V+G     +  A
Sbjct: 228 LALHGIPDGVNGQYLSYNDPA 248

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  194 bits (496), Expect = 1e-61
 Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTGA SG+GR      A+AG  ++A  R  D +K + DEI    G    A AV
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGG---SAEAV 84

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D++ +     N  ++   A  R+D LVNNAG+  A     +++   W  ++  NL  +
Sbjct: 85  VADLA-DLEGAANVAEEL-AATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAA 141

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           W++S+     M  A+  G ++ I+S+ +   G      AYA+SK  +  +T+ L+ E   
Sbjct: 142 WVLSRSFGTAML-AHGSGRIVTIASMLSFQGG--RNVAAYAASKHAVVGLTRALASEWAG 198

Query: 197 HKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
             + VN++ PG   +  T  L    +    + +R  P   + T +  +     +L  D++
Sbjct: 199 RGVGVNALAPGYVVTANTAALRADDERAAEITARI-PAGRWATPED-MVGPAVFLASDAA 256

Query: 256 EYVSGNIFIVDSG 268
            YV G +  VD G
Sbjct: 257 SYVHGQVLAVDGG 269

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  195 bits (497), Expect = 2e-61
 Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 36/279 (12%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAM 74
            ++    +VTGA+  +GR   + L + G R+ +      +   SL DE+NK+      A+
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAV 77

Query: 75  AVELDVS---ANGAAIENSVQKAWEAFGRIDALVNNAGV---------SGAVKSPLDLTE 122
             + D++      A+ E  +   + AFGR D LVNNA                S     E
Sbjct: 78  VCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVE 137

Query: 123 EEWNHIMKTNLTGSWLVSKYVCIRMRDANQE-----GSVINISSIAATSRGQLPGGVAYA 177
            +   ++ TN    +L++     R +  N        S++N+       +        Y 
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV-DQP-CMAFSLYN 195

Query: 178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPL- 233
             K  L  +T+  +LEL  + IRVN + PG+  S +   +    K  W   V     PL 
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAPGV--SLLPVAMGEEEKDKWRRKV-----PLG 248

Query: 234 RDFGTT-DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           R   +    A    V +LV  S++Y++G+I  VD G +L
Sbjct: 249 RREASAEQIA--DAVIFLVSGSAQYITGSIIKVDGGLSL 285

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  193 bits (494), Expect = 2e-61
 Identities = 58/260 (22%), Positives = 101/260 (38%), Gaps = 20/260 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV---AAARRVDRLKSLCDEINKQSGSSVRA 73
           L NKV+++ G    LG       A     +V     A+  D    L DE+  Q     + 
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA---KV 65

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTN 132
              + D+S N   +      A + FG++D  +N  G    +K P+ + +E E++ +   N
Sbjct: 66  ALYQSDLS-NEEEVAKLFDFAEKEFGKVDIAINTVGK--VLKKPIVETSEAEFDAMDTIN 122

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
              ++   K     M      G +I I++    +         YA +KA +   T+  S 
Sbjct: 123 NKVAYFFIKQAAKHMNPN---GHIITIATSLLAAY--TGFYSTYAGNKAPVEHYTRAASK 177

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLV 251
           EL   +I VN+I PG   +    G   K+      S+           D A   ++++L 
Sbjct: 178 ELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQA-MGNQLTKIEDIA--PIIKFLT 234

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            D   +++G     + G T 
Sbjct: 235 TDGW-WINGQTIFANGGYTT 253

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  191 bits (487), Expect = 2e-60
 Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 33/266 (12%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K V VTGA  G+G    L   +AG ++    +                         
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-------------QEQYPFATE 51

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
            +DV+ + A +    Q+      R+DALVN AG+   GA      L++E+W      N+ 
Sbjct: 52  VMDVA-DAAQVAQVCQRLLAETERLDALVNAAGILRMGAT---DQLSKEDWQQTFAVNVG 107

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++ + +    + R   + G+++ ++S AA    +  G  AY +SKA L ++   + LEL
Sbjct: 108 GAFNLFQQTMNQFRRQ-RGGAIVTVASDAA-HTPR-IGMSAYGASKAALKSLALSVGLEL 164

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY--------PLRDFGTT-DPALTS 245
               +R N + PG   +++   L   D       R +        PL       + A  +
Sbjct: 165 AGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIA--N 222

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATL 271
            + +L  D + +++    +VD G+TL
Sbjct: 223 TILFLASDLASHITLQDIVVDGGSTL 248

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  192 bits (489), Expect = 2e-60
 Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 24/269 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-------RLKSLCDEINKQSGS 69
           L  K + +TGAS G+G    L  A+ G  +  AA+           + S    +N   G 
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG- 62

Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
             + +A++ D+      +  +V    + FG ID LVNNA     ++  LD   + ++ + 
Sbjct: 63  --QGLALKCDIR-EEDQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQ 118

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
           + N  GS++ ++     +  A     ++ ++   + +         Y  +K G++ +T  
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPN-PHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLG 177

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           L+ E G   + +N++ P      I       D +N +             +  +      
Sbjct: 178 LAAEFGPQGVAINALWPRTV---IAT-----DAINMLPG--VDAAACRRPE-IMADAAHA 226

Query: 250 LVHDSSEYVSGNIFIVDSGATLPGLPIFS 278
           ++   +    G   I D      G+   S
Sbjct: 227 VLTREAAGFHGQFLIDDEVLAQAGITDLS 255

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  192 bits (489), Expect = 2e-60
 Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 24/268 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
           L+ KV +VTGA  G+GRE  ++L + GC+++   A   +  + +   I K       A  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS---DAAC 83

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ +V      I    ++A + FG++D + +N+GV  +     D+T EE++ +   N  G
Sbjct: 84  VKANVG-VVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRG 141

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + V++     +      G +I + SI   ++  +P    Y+ SK  +    +C+++++ 
Sbjct: 142 QFFVAREAYKHLEIG---GRLILMGSITGQAKA-VPKHAVYSGSKGAIETFARCMAIDMA 197

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY-----------PLRDFGTT-DPAL 243
             KI VN + PG  K+++   + ++   N                  PLR  G   D A 
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA- 256

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGATL 271
             +V +L  +   +V+G +  +D GA +
Sbjct: 257 -RVVCFLASNDGGWVTGKVIGIDGGACM 283

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  191 bits (487), Expect = 4e-60
 Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 24/266 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV + TGA  G+GR   ++L + G  +V          + +  E+ K      + +A
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA---QGVA 75

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           ++ D+S   + +     KA   FG +D +++N+G+       L++T+E ++ +   N  G
Sbjct: 76  IQADIS-KPSEVVALFDKAVSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRG 133

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + V++      R     G +I  SSIAA   G +P    YA SKA +    +  +++ G
Sbjct: 134 QFFVAQQGLKHCRRG---GRIILTSSIAAVMTG-IPNHALYAGSKAAVEGFCRAFAVDCG 189

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY-----------PLRDFGTT-DPAL 243
              + VN I PG  K+++ +                           PL+  G   D   
Sbjct: 190 AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG- 248

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGA 269
              V  L  + SE+++G +  +  G 
Sbjct: 249 -RAVSALCQEESEWINGQVIKLTGGG 273

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  192 bits (489), Expect = 5e-60
 Identities = 84/280 (30%), Positives = 127/280 (45%), Gaps = 31/280 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA------------AARRVDRLKSLCDEI 63
           +L  KV  +TGA+ G GR   + LA+ G  IVA            A    + LK     +
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 64  NKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
            +Q     R +A + DV  + A+++  V +A   FG ID LV+N G+S      + LT++
Sbjct: 103 EEQGR---RIIARQADVR-DLASLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQ 157

Query: 124 EWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
           +W+ I++TNL G+W   + V   M +  Q GSVI +SS     RG  PG   YA+SK G+
Sbjct: 158 QWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL-RGA-PGQSHYAASKHGV 215

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN-----------NVASRTYP 232
             +   L+ E+G H IRVNS+ PG   +E+                              
Sbjct: 216 QGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275

Query: 233 LRDFGTTDPA-LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           L      +P  +++ V +L  D + Y+ G    VD G   
Sbjct: 276 LLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  189 bits (483), Expect = 8e-60
 Identities = 52/271 (19%), Positives = 93/271 (34%), Gaps = 34/271 (12%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
              +VT      G    L L++AG  +        +   L          +      +L 
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL---------EAFAETYPQLK 52

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
              +       ++    A+G++D LV+N   +   +       E++   ++      + +
Sbjct: 53  PM-SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFAL 111

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
              V  +M+     G +I I+S              Y S++AG   +   LS ELG + I
Sbjct: 112 VNAVASQMKKRKS-GHIIFITSATPFGPW--KELSTYTSARAGACTLANALSKELGEYNI 168

Query: 200 RVNSICPGLFKSEITEGL-----------MKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
            V +I P    SE +                             L+  GT    L  LV 
Sbjct: 169 PVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT-----ALQRLGTQK-ELGELVA 222

Query: 249 YLVHDSSEYVSGNIFIVDSGATL----PGLP 275
           +L   S +Y++G +F +  G  +    PG+P
Sbjct: 223 FLASGSCDYLTGQVFWLAGGFPMIERWPGMP 253

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  190 bits (485), Expect = 1e-59
 Identities = 66/289 (22%), Positives = 107/289 (37%), Gaps = 43/289 (14%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA------------ARRVDRLKSLCDEI 63
           ++ +KVV+VTG + G GR   + LA+ G  I+                    L+    E+
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 64  NKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
            K      +A   E+DV  + AA+   +  A   FG++D +V NAG+         L  +
Sbjct: 67  EKTGR---KAYTAEVDVR-DRAAVSRELANAVAEFGKLDVVVANAGICPLG---AHLPVQ 119

Query: 124 EWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA---------TSRGQLPGGV 174
            +      +  G           +       S+I   S+A              Q PGG 
Sbjct: 120 AFADAFDVDFVGVINTVHAALPYLTSG---ASIITTGSVAGLIAAAQPPGAGGPQGPGGA 176

Query: 175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPG-----LFKSEITEGLMKKDWLNNVASR 229
            Y+ +K  +++ T  L+ +L    IR N I P      +  S       + D      + 
Sbjct: 177 GYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRAD 236

Query: 230 TYPLRDFGTTDPA-------LTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
                      P        +++ V +L  D S YV+G  F VD+GA L
Sbjct: 237 ALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  188 bits (481), Expect = 3e-59
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 16/256 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  K   VTG S G+G      LA  G  +        +R +++  EI +  G   RA+A
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG---RAVA 85

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +  D   +  AIE ++++  EA G +D LVN+AG+        + T  +++ +M  N   
Sbjct: 86  IRADNR-DAEAIEQAIRETVEALGGLDILVNSAGI-WHSAPLEETTVADFDEVMAVNFRA 143

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            ++  +     + D    G +I I S  A      PG   Y++SKA L  +TK L+ +LG
Sbjct: 144 PFVAIRSASRHLGDG---GRIITIGSNLAELVP-WPGISLYSASKAALAGLTKGLARDLG 199

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDS 254
              I VN + PG   +++       D       R      +G   D A   LV +L    
Sbjct: 200 PRGITVNIVHPGSTDTDMNPAD--GDHAEAQRERI-ATGSYGEPQDIA--GLVAWLAGPQ 254

Query: 255 SEYVSGNIFIVDSGAT 270
            ++V+G    +D GA 
Sbjct: 255 GKFVTGASLTIDGGAN 270

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  188 bits (480), Expect = 4e-59
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 15/254 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
             NKV +VTGAS G+G      LA  G  +V   A +    + +  +I    G   +A+ 
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG---KALT 81

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
            + DVS + AA+      A EAFG +D LVNNAG+   + +  +  +  ++ ++  NL G
Sbjct: 82  AQADVS-DPAAVRRLFATAEEAFGGVDVLVNNAGI-MPLTTIAETGDAVFDRVIAVNLKG 139

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++   +    R+R     G +IN+S+         P    YA++KAG+ AMT  LS EL 
Sbjct: 140 TFNTLREAAQRLRVG---GRIINMSTSQVGLL--HPSYGIYAAAKAGVEAMTHVLSKELR 194

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDS 254
              I VN++ PG   +++       +  +  A    PL   GT  D A    V +L    
Sbjct: 195 GRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLA-PLERLGTPQDIA--GAVAFLAGPD 251

Query: 255 SEYVSGNIFIVDSG 268
             +V+G +   + G
Sbjct: 252 GAWVNGQVLRANGG 265

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  188 bits (481), Expect = 4e-59
 Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 23/258 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            +NKV +VTGA  G+GRE    LAK+   ++  +R      S+ DEI         +   
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY---ESSGY 98

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLT 134
             DVS     I   + K       +D LVNNAG++   +  L L    +EW  +++TNL 
Sbjct: 99  AGDVS-KKEEISEVINKILTEHKNVDILVNNAGIT---RDNLFLRMKNDEWEDVLRTNLN 154

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             + +++ +  RM +  + G +INISSI   + G   G   Y+SSKAG+   TK L+ EL
Sbjct: 155 SLFYITQPISKRMINN-RYGRIINISSIVGLT-GN-VGQANYSSSKAGVIGFTKSLAKEL 211

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
               I VN+I PG   S++T+ +   +KK+ ++N+     P    GT  + A  +L  +L
Sbjct: 212 ASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI-----PAGRMGTPEEVA--NLACFL 264

Query: 251 VHDSSEYVSGNIFIVDSG 268
             D S Y++G +F++D G
Sbjct: 265 SSDKSGYINGRVFVIDGG 282

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  188 bits (479), Expect = 4e-59
 Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 18/259 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           ++ +V +VTGAS G+GR   L L KAG  +    R +D L+ +  E     G   + + V
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG---QCVPV 59

Query: 77  ELDVSANGAAIENSVQKAW-EAFGRIDALVNNAGVSGAVKSP------LDLTEEEWNHIM 129
             D S   + + +  ++   E  GR+D LVNNA                +     W+ I 
Sbjct: 60  VCDSS-QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
              L G +  S Y    M  A Q G ++ ISS  +    Q    V Y   KA  + +   
Sbjct: 119 NVGLRGHYFCSVYGARLMVPAGQ-GLIVVISSPGSL---QYMFNVPYGVGKAACDKLAAD 174

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKD--WLNNVASRTYPLRDFGTTDPALTSLV 247
            + EL  H +   S+ PG+ ++E+ +  M K+    + V  +         T       V
Sbjct: 175 CAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCV 234

Query: 248 RYLVHD-SSEYVSGNIFIV 265
             L  D +   +SG +   
Sbjct: 235 VALATDPNILSLSGKVLPS 253

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  188 bits (479), Expect = 4e-59
 Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 28/266 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN----KQSGSSV 71
           +L + + +VTGA SG+GR   + LA  G  + A        +     +     K+     
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 72  RAMAVELDVSANGAAIENSVQKAWEAFGRI-DALVNNAGVSGAVKSPLDL--TEEEWNHI 128
              A + DVS    A    +++    F R    +V+ AG+    +    L  +E++W+ +
Sbjct: 64  NHAAFQADVS-EARAARCLLEQVQACFSRPPSVVVSCAGI---TQDEFLLHMSEDDWDKV 119

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS--RGQLPGGVAYASSKAGLNAM 186
           +  NL G++LV++     +      GS+INISSI       GQ      YA+SKAG+  +
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ----TNYAASKAGVIGL 175

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPA 242
           T+  + ELG H IR NS+ PG   + +T+ +   +       +     P+   G   D A
Sbjct: 176 TQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMI-----PMGHLGDPEDVA 230

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSG 268
              +V +L  + S Y++G    V  G
Sbjct: 231 --DVVAFLASEDSGYITGTSVEVTGG 254

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  187 bits (477), Expect = 4e-59
 Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 17/207 (8%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCR-------IVAAARRVDRLKSLCDEINKQSGSSV 71
             ++++TGA  G+GR   L+ A+A          +V ++R    L+ +  E   +     
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--- 58

Query: 72  RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMK 130
               +  D+S + A +        E +G ID LVNNAGV       L DLTEE++++ M 
Sbjct: 59  LTDTITADIS-DMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMN 115

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TNL G++ +++ +   M      G +  I+S+AAT          Y  SK G   + + +
Sbjct: 116 TNLKGTFFLTQALFALME-RQHSGHIFFITSVAATKAF--RHSSIYCMSKFGQRGLVETM 172

Query: 191 SLELGVHKIRVNSICPGLFKSEITEGL 217
            L      +R+  + PG   + +   +
Sbjct: 173 RLYARKCNVRITDVQPGAVYTPMWGKV 199

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  188 bits (479), Expect = 6e-59
 Identities = 58/275 (21%), Positives = 104/275 (37%), Gaps = 30/275 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            +    ++TG +  +G    + L + G R +V         + L  E+N        A+ 
Sbjct: 9   SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVL 66

Query: 76  VELDVS---ANGAAIENSVQKAWEAFGRIDALVNNAGV----------SGAVKSPLDLTE 122
            + D+S   +     E+ +  ++ AFGR D LVNNA                 +     +
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 123 EEWNHIMKTNLTGSWLVSKYVCIRMRDA----NQEGSVINISSIAATSRGQLPGGVAYAS 178
            +   +  +N      + +    R  +     ++  SV+N+          LPG   Y  
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP--LPGFCVYTM 184

Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFG 237
           +K  L  +T+  +LEL    IRVN++ PGL         M ++       +  PL +   
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVAPGLSL---LPPAMPQETQEEYRRKV-PLGQSEA 240

Query: 238 TT-DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           +    A    + +LV   + Y++G    VD G  L
Sbjct: 241 SAAQIA--DAIAFLVSKDAGYITGTTLKVDGGLIL 273

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  186 bits (476), Expect = 9e-59
 Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 21/260 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
               K  +V G + G+G      L + G  ++   R    +  + +E         R  A
Sbjct: 5   NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG------PRVHA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
           +  D++ +   I      A +  G ID L  NAGV  +   P   ++E  ++     N  
Sbjct: 59  LRSDIA-DLNEIAVLGAAAGQTLGAIDLLHINAGV--SELEPFDQVSEASYDRQFAVNTK 115

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++   + +   +R+    GS++  SS+A    G  PG   Y++SKA L +    L+ EL
Sbjct: 116 GAFFTVQRLTPLIREG---GSIVFTSSVADE-GG-HPGMSVYSASKAALVSFASVLAAEL 170

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY----PLRDFGTTDPALTSLVRYL 250
               IRVNS+ PG   +         +              P++  GT D  +   V +L
Sbjct: 171 LPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTAD-EVARAVLFL 229

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
             +++ + +G    VD G  
Sbjct: 230 AFEAT-FTTGAKLAVDGGLG 248

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  186 bits (475), Expect = 1e-58
 Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 19/263 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTG++SG+G      LA  G  IV         ++ +   +  Q G  V+ + 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLY 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              D+S  G A+   V  A    GRID LVNNAG+        D   E+W+ I+  NL+ 
Sbjct: 60  DGADLS-KGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSA 117

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +  +      M+     G +INI+S             AY ++K G+   TK  +LE  
Sbjct: 118 VFHGTAAALPHMKKQGF-GRIINIASAHGLVAS--ANKSAYVAAKHGVVGFTKVTALETA 174

Query: 196 VHKIRVNSICPGLFKSEITE----------GLMKKDWLNNVASRTYPLRDFGTTDPALTS 245
              I  N+ICPG  ++ + E          G+ ++     + S   P   F T +  L  
Sbjct: 175 GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGG 233

Query: 246 LVRYLVHDSSEYVSGNIFIVDSG 268
              +L  D++  ++G    VD G
Sbjct: 234 TAVFLASDAAAQITGTTVSVDGG 256

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  185 bits (473), Expect = 2e-58
 Identities = 42/257 (16%), Positives = 78/257 (30%), Gaps = 25/257 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKQSGSSVRAMAVEL 78
            + +VT A    G      L + G  +V          +    E          A+A + 
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT---IALAEQ- 57

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP--LDLTEEEWNHIMKTNLTGS 136
                    E  V    +    ID +V+N  +   +        +E +   + +      
Sbjct: 58  -------KPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFP 110

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            L+ +     +R A    SVI I+S     +        Y  ++A   A+ +  +  L  
Sbjct: 111 ILLLQSAIAPLRAAGG-ASVIFITSSVGK-KPL-AYNPLYGPARAATVALVESAAKTLSR 167

Query: 197 HKIRVNSICPGLFKSEITEGLMKK----DWLNNVASRTYPLRDFGTT-DPALTSLVRYLV 251
             I + +I P  F +             +    V     PL   G   +    +L+ +L 
Sbjct: 168 DGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDV-PLGRLGRPDEMG--ALITFLA 224

Query: 252 HDSSEYVSGNIFIVDSG 268
              +  + G  F    G
Sbjct: 225 SRRAAPIVGQFFAFTGG 241

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  184 bits (470), Expect = 6e-58
 Identities = 79/268 (29%), Positives = 135/268 (50%), Gaps = 33/268 (12%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L +K V++TGA+ G+GR      AK G R+VA       L+   + +         A  
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHP 53

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV---SGAVKSPLDLTEEEWNHIMKTN 132
           V +DV+ + A++E    +A    GR+D +V+ AG+   +   K    +  E+W  +++ N
Sbjct: 54  VVMDVA-DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWK----MPLEDWELVLRVN 108

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAAT-SRGQLPGGVAYASSKAGLNAMTKCLS 191
           LTGS+LV+K     MR+ N  GS++  +S     + GQ      YA+S AG+  +T+ L+
Sbjct: 109 LTGSFLVAKAASEAMREKNP-GSIVLTASRVYLGNLGQ----ANYAASMAGVVGLTRTLA 163

Query: 192 LELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLV 247
           LELG   IRVN++ PG  ++ +T  +   +++  +        PL   G   + A     
Sbjct: 164 LELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAAT-----PLGRAGKPLEVA--YAA 216

Query: 248 RYLVHDSSEYVSGNIFIVDSGATLPGLP 275
            +L+ D S +++G +  VD G T+   P
Sbjct: 217 LFLLSDESSFITGQVLFVDGGRTIGAAP 244

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  185 bits (473), Expect = 6e-58
 Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 22/264 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              +   VTG SSG+G      LA  G  +   AR    + +  D +             
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH---DVDGS 78

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+ +   +  +V  A E FG I  LVN+AG +G      DL +  W  ++ TNLTG 
Sbjct: 79  SCDVT-STDEVHAAVAAAVERFGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGV 136

Query: 137 WLVSKYVC--IRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           + V++ V     MR+A   G ++NI+S      G       Y +SK G+   TK +  EL
Sbjct: 137 FRVTREVLRAGGMREAGW-GRIVNIASTGGKQ-GV-MYAAPYTASKHGVVGFTKSVGFEL 193

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS---------RTYPLRDFGTT-DPALT 244
               I VN++CPG  ++ + E + +    +   +            PL  + T  + A  
Sbjct: 194 AKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVA-- 251

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSG 268
            LV YLV D++  ++     V  G
Sbjct: 252 GLVGYLVTDAAASITAQALNVCGG 275

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  185 bits (471), Expect = 7e-58
 Identities = 49/257 (19%), Positives = 105/257 (40%), Gaps = 22/257 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +  +++TGAS  +G    L L + G R++ + R      +   E+ +       A+A+
Sbjct: 25  LSSAPILITGASQRVGLHCALRLLEHGHRVIISYR---TEHASVTELRQAG-----AVAL 76

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D S     I   +         + A+V+NA     +        + +  +   ++   
Sbjct: 77  YGDFS-CETGIMAFIDLLKTQTSSLRAVVHNASE--WLAETPGEEADNFTRMFSVHMLAP 133

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L++ +    +  A++   +++IS      +G     +AY ++KAGL ++T   +     
Sbjct: 134 YLINLHCEPLLT-ASEVADIVHISDDVTR-KG-SSKHIAYCATKAGLESLTLSFAARFA- 189

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             ++VN I P L   +  +    +       +++  L      +  +   +RYL+   S 
Sbjct: 190 PLVKVNGIAPALLMFQPKDDAAYRANA---LAKS-ALGIEPGAE-VIYQSLRYLL--DST 242

Query: 257 YVSGNIFIVDSGATLPG 273
           YV+G    V+ G  + G
Sbjct: 243 YVTGTTLTVNGGRHVKG 259

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  185 bits (471), Expect = 1e-57
 Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
             D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +       A  
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV---EADG 75

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              DV  +   IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG
Sbjct: 76  RTCDVR-SVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTG 133

Query: 136 SWLVSKYV--CIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            + V+K V     M +    G ++NI+S      G       Y++SK G+   TK L LE
Sbjct: 134 VFRVTKQVLKAGGMLERGT-GRIVNIASTGGKQ-GV-VHAAPYSASKHGVVGFTKALGLE 190

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS---------RTYPLRDFGTT-DPAL 243
           L    I VN++CPG  ++ +   + +        S            P+  +    + A 
Sbjct: 191 LARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVA- 249

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSG 268
             +V YL+   +  V+     V  G
Sbjct: 250 -EMVAYLIGPGAAAVTAQALNVCGG 273

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  185 bits (471), Expect = 1e-57
 Identities = 48/269 (17%), Positives = 100/269 (37%), Gaps = 24/269 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-------RLKSLCDEINKQSGS 69
           L  K + ++G S G+G      +A  G  +   A+  +        + +   EI +  G 
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG- 65

Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
             +A+ +  D+  +G A+  +V K  E FG ID  VNNA     + S  ++  + ++ + 
Sbjct: 66  --QALPIVGDIR-DGDAVAAAVAKTVEQFGGIDICVNNASA-INLGSIEEVPLKRFDLMN 121

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
              + G++ VS+     M+       ++ +S        +      Y  +K G+      
Sbjct: 122 GIQVRGTYAVSQSCIPHMK-GRDNPHILTLSPPIR-LEPKWLRPTPYMMAKYGMTLCALG 179

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           ++ EL    I  N++ P      +    ++     N+      +      +         
Sbjct: 180 IAEELRDAGIASNTLWPRTT---VATAAVQ-----NLLGGDEAMARSRKPE-VYADAAYV 230

Query: 250 LVHDSSEYVSGNIFIVDSGATLPGLPIFS 278
           +++  S Y  GN  + +      G+   S
Sbjct: 231 VLNKPSSYT-GNTLLCEDVLLESGVTDLS 258

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  183 bits (467), Expect = 1e-57
 Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 14/200 (7%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
              V++TGAS G+G      L   G R+   AR   RL++L  E+         A+ +  
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-------ALPLPG 57

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSW 137
           DV         +V    EAFG + ALVNNAGV   V  P+ +LT EEW  ++ TNLTG++
Sbjct: 58  DVR-EEGDWARAVAAMEEAFGELSALVNNAGV--GVMKPVHELTLEEWRLVLDTNLTGAF 114

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
           L  ++    +      G+++N+ S+A   +    GG AY +SK GL  +     L+L   
Sbjct: 115 LGIRHAVPALL-RRGGGTIVNVGSLAG--KNPFKGGAAYNASKFGLLGLAGAAMLDLREA 171

Query: 198 KIRVNSICPGLFKSEITEGL 217
            +RV ++ PG   +      
Sbjct: 172 NVRVVNVLPGSVDTGFAGNT 191

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  184 bits (469), Expect = 2e-57
 Identities = 75/258 (29%), Positives = 131/258 (50%), Gaps = 23/258 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD +V +VTGAS G+GR   L+LA+ G  ++  A      + +     +           
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL---EGRGA 82

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLT 134
            L+V+ +  A++  V+   + FG ++ LVNNAG++   +  L +   ++EW+ ++ TNL 
Sbjct: 83  VLNVN-DATAVDALVESTLKEFGALNVLVNNAGIT---QDQLAMRMKDDEWDAVIDTNLK 138

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             + +S+ V   M  A   G ++NI+S+  ++ G  PG V YA++KAG+  MT+ L+ E+
Sbjct: 139 AVFRLSRAVLRPMMKARG-GRIVNITSVVGSA-GN-PGQVNYAAAKAGVAGMTRALAREI 195

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
           G   I VN + PG   +++T+GL    +      +     PL   G+  D A    V +L
Sbjct: 196 GSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQI-----PLGRLGSPEDIA--HAVAFL 248

Query: 251 VHDSSEYVSGNIFIVDSG 268
               + Y++G    V+ G
Sbjct: 249 ASPQAGYITGTTLHVNGG 266

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  183 bits (467), Expect = 2e-57
 Identities = 39/254 (15%), Positives = 79/254 (31%), Gaps = 33/254 (12%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             +K ++V G S  LG E            ++   R +                    + 
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------DHSF 64

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +  S     I++ ++K      ++D  V  AG      +  D   +    ++  NL  +
Sbjct: 65  TIKDS-GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSA 123

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  +      +      G  +   + AA +R    G +AY ++KA  + + K L+ E G 
Sbjct: 124 FASAHIGAKLLNQG---GLFVLTGASAALNRT--SGMIAYGATKAATHHIIKDLASENGG 178

Query: 197 --HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
                    I P    +      M             PL +          L  +  +  
Sbjct: 179 LPAGSTSLGILPVTLDTPTNRKYMSDA----NFDDWTPLSEVAEK------LFEWSTNSD 228

Query: 255 SEYVSGNIFIVDSG 268
           S   +G++   ++ 
Sbjct: 229 SRPTNGSLVKFETK 242

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  183 bits (468), Expect = 2e-57
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 23/266 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAM 74
           +LD KV +VTG+  G+G    + L + G ++V   A      + +  EI         A+
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS---DAI 71

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           A++ D+      I     +A   FG +D  V+N+GV  +     D+TEEE++ +   N  
Sbjct: 72  AIKADIR-QVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTR 129

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G + V++     + +    G ++  SS  +     +P    Y+ SK  +++  +  S + 
Sbjct: 130 GQFFVAREAYRHLTEG---GRIVLTSSNTSKDFS-VPKHSLYSGSKGAVDSFVRIFSKDC 185

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY----------PLRDFGTT-DPAL 243
           G  KI VN++ PG   +++   +      N  +              PL   G   D A 
Sbjct: 186 GDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA- 244

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGA 269
            ++V +LV    E+V+G +  +D GA
Sbjct: 245 -NVVGFLVSKEGEWVNGKVLTLDGGA 269

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  182 bits (465), Expect = 4e-57
 Identities = 90/260 (34%), Positives = 139/260 (53%), Gaps = 24/260 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAM 74
           QL  K  +VTG+S GLG+     L   G  IV   +     L +  +E           +
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI---NVV 58

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTN 132
             + DV  N   +EN V+ A +AFGRID LVNNAG++   +  L L  +E++W+ ++ TN
Sbjct: 59  VAKGDVK-NPEDVENMVKTAMDAFGRIDILVNNAGIT---RDTLMLKMSEKDWDDVLNTN 114

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L  ++L +K V   M    + G +INI+SIA    G   G   YA+SKAGL   TK ++ 
Sbjct: 115 LKSAYLCTKAVSKIMLKQ-KSGKIINITSIAGII-GN-AGQANYAASKAGLIGFTKSIAK 171

Query: 193 ELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVR 248
           E     I  N++ PG+ K+++T+ L   +K+ +LNN+     PL+ FGT  + A  ++V 
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNI-----PLKRFGTPEEVA--NVVG 224

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L  D S Y++G +  +D G
Sbjct: 225 FLASDDSNYITGQVINIDGG 244

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  183 bits (467), Expect = 4e-57
 Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 28/269 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           Q +    +V+G + GLG      L   G  +V A    ++ K+L DE+        RA  
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGN------RAEF 80

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK------SPLDLTEEEWNHIM 129
           V  +V+ +  ++  +++ A +      A+V + G   A +      SP D+    +   +
Sbjct: 81  VSTNVT-SEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADM--GGFTKTI 137

Query: 130 KTNLTGSWLVSKYVCIRMR-----DANQEGSVINISSIAATSRGQLPGGVAYASSKAGLN 184
              L G++ V++ V   +      +  + G+++  +SIA    GQ  G  AYA++KAG+ 
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE-GQ-IGQTAYAAAKAGVI 195

Query: 185 AMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-L 243
            +T   + +L    IRVN+I PG  K+ I E + ++      A+  +P R  G   P   
Sbjct: 196 GLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKR-LG--TPDEF 252

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGATLP 272
                +L+ +   Y++G +  +D      
Sbjct: 253 ADAAAFLLTNG--YINGEVMRLDGAQRFT 279

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  184 bits (469), Expect = 4e-57
 Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 7/201 (3%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
             D +  +VTG +SG+G     + A+ G R+V +      L+   + +  Q      A  
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF---DAHG 84

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  DV  +   +     +A+   G +D + +NAG+         +  ++W  ++  +L G
Sbjct: 85  VVCDVR-HLDEMVRLADEAFRLLGGVDVVFSNAGI-VVAGPLAQMNHDDWRWVIDIDLWG 142

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           S    +    R+ +    G +   +S A        G   Y  +K G+  + + L+ E+ 
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGL--VPNAGLGTYGVAKYGVVGLAETLAREVK 200

Query: 196 VHKIRVNSICPGLFKSEITEG 216
            + I V+ +CP + ++++   
Sbjct: 201 PNGIGVSVLCPMVVETKLVSN 221

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  182 bits (465), Expect = 4e-57
 Identities = 49/250 (19%), Positives = 87/250 (34%), Gaps = 14/250 (5%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
              N  V V GA   +G E     A  G  + A  R  ++L  L  EI    G   R +A
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG---RIVA 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             LD   N   +   +  A +A   ++  + N G        L+ T+  +  + +     
Sbjct: 61  RSLDAR-NEDEVTAFLNAA-DAHAPLEVTIFNVGA-NVNFPILETTDRVFRKVWEMACWA 117

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            ++  +     M  A+ +G +    + A+  RG   G  A+AS+K GL A+ + ++ EL 
Sbjct: 118 GFVSGRESARLML-AHGQGKIFFTGATASL-RGG-SGFAAFASAKFGLRAVAQSMARELM 174

Query: 196 VHKIRV-NSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
              I V + I      +       ++ +                   A+      L    
Sbjct: 175 PKNIHVAHLIIDSGVDTAWVRERREQMF---GKDALANPDLLMPPA-AVAGAYWQLYQQP 230

Query: 255 SEYVSGNIFI 264
               +  + I
Sbjct: 231 KSAWTFEMEI 240

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  182 bits (464), Expect = 5e-57
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 20/263 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  +VTG++SG+G      LA+AG  IV              EI +      +A+  
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF--GDPAPALAEIARHGV---KAVHH 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+S + A IE     A   FG +D LVNNAG+   V        E W+ I+  NL+  
Sbjct: 57  PADLS-DVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAV 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  ++     MR  N  G +INI+S+     G   G  AY ++K G+  +TK + LE   
Sbjct: 115 FHGTRLALPGMRARNW-GRIINIASVHGL-VG-STGKAAYVAAKHGVVGLTKVVGLETAT 171

Query: 197 HKIRVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPALTSLV 247
             +  N+ICPG   + + +  +              +++ +   P   F T +  L  LV
Sbjct: 172 SNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE-HLGELV 230

Query: 248 RYLVHDSSEYVSGNIFIVDSGAT 270
            +L  ++   V G  + VD G  
Sbjct: 231 LFLCSEAGSQVRGAAWNVDGGWL 253

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  181 bits (463), Expect = 7e-57
 Identities = 78/259 (30%), Positives = 142/259 (54%), Gaps = 22/259 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L  KV +VTG++ G+GR     LA AG  ++      +R K++ +EI  + G  V+A  
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG--VKAHG 61

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNL 133
           VE+++  +  +I  + ++ +     ID LVNNAG++   +  L L  +  +W  ++K NL
Sbjct: 62  VEMNLL-SEESINKAFEEIYNLVDGIDILVNNAGIT---RDKLFLRMSLLDWEEVLKVNL 117

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           TG++LV++    +M      G ++NISS+   + G   G V Y+++KAGL   TK L+ E
Sbjct: 118 TGTFLVTQNSLRKMIKQRW-GRIVNISSVVGFT-GN-VGQVNYSTTKAGLIGFTKSLAKE 174

Query: 194 LGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRY 249
           L    + VN++ PG  ++++T  L   +K+ +   +     PL  FG+  + A  ++V +
Sbjct: 175 LAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQI-----PLGRFGSPEEVA--NVVLF 227

Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  + + Y++G +  V+ G
Sbjct: 228 LCSELASYITGEVIHVNGG 246

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  180 bits (460), Expect = 1e-56
 Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 12/205 (5%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           + KV ++TGAS G+G      LA+ G  +   AR VDRL+ +  E+ ++ G  V      
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHH 58

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGS 136
           LDVS    ++E   +K  E FG +D +V NAG+       L +L+EEE++ +++ NL G 
Sbjct: 59  LDVS-KAESVEEFSKKVLERFGDVDVVVANAGL--GYFKRLEELSEEEFHEMIEVNLLGV 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           W   K     ++      +++  S ++A      P G  Y S+K    A+ +   +E   
Sbjct: 116 WRTLKAFLDSLK-RTGGLALVTTSDVSARLI---PYGGGYVSTKWAARALVRTFQIEN-- 169

Query: 197 HKIRVNSICPGLFKSEITEGLMKKD 221
             +R   + PG   +        K 
Sbjct: 170 PDVRFFELRPGAVDTYFGGSKPGKP 194

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  181 bits (463), Expect = 2e-56
 Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 34/281 (12%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA------------AARRVDRLKSLCDEI 63
             + K  ++TG + G+GR   + LA+AG  I                   D L      +
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 64  NKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEE 123
            K      R ++ ++DV  + AA+E+ V +A +  G ID  + NAG+S  +    ++   
Sbjct: 67  EKTGR---RCISAKVDVK-DRAALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESA 121

Query: 124 EWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
           +W+ ++ TNLTG++     V   M   N  G ++ +SS+            +Y SSK G+
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRNY-GRIVTVSSMLGH-SAN-FAQASYVSSKWGV 178

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEIT-------------EGLMKKDWLNNVASRT 230
             +TKC + +L  + I VN++ PG  ++ +T             E    KD  +  AS  
Sbjct: 179 IGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLH 238

Query: 231 YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
                F   +  +T  V +LV ++S +++G +  +D+GAT 
Sbjct: 239 LQYAPFLKPE-EVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  181 bits (461), Expect = 2e-56
 Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 27/268 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           QL ++V +VTGASSGLG      LA+ G  ++    +    +    E+            
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG------AAVRF 57

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK-----SPLDLTEEEWNHIMK 130
              DV+ N A    ++  A + FG +  LVN AG +   K      P  L  + +   + 
Sbjct: 58  RNADVT-NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHAL--DSFARTVA 114

Query: 131 TNLTGSWLVSKYVCIRMR-----DANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNA 185
            NL G++ + +     M         + G ++N +SIAA   GQ  G  AYA+SK G+ A
Sbjct: 115 VNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-GQ-IGQAAYAASKGGVAA 172

Query: 186 MTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LT 244
           +T   + EL    IRV +I PG+F + +  G+ +       AS  +P R  G        
Sbjct: 173 LTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPR-LG--RAEEYA 229

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGATLP 272
           +LV+++    +  ++G +  +D    + 
Sbjct: 230 ALVKHIC--ENTMLNGEVIRLDGALRMA 255

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  180 bits (460), Expect = 2e-56
 Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 24/259 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTGAS G+GR   +DLAK G  +V   A    +   + DEI K       A+A
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS---DAIA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNL 133
           V  DV+ N   + N V++  + FG++D LVNNAGV+   K  L +   EEEW+ ++ TNL
Sbjct: 59  VRADVA-NAEDVTNMVKQTVDVFGQVDILVNNAGVT---KDNLLMRMKEEEWDTVINTNL 114

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G +L +K V   M    + G ++NI+S+   + G  PG   Y ++KAG+  +TK  + E
Sbjct: 115 KGVFLCTKAVSRFMMRQ-RHGRIVNIASVVGVT-GN-PGQANYVAAKAGVIGLTKTSAKE 171

Query: 194 LGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRY 249
           L    I VN+I PG   +++T+ L   +K + L  +     P   FG   D A  + V +
Sbjct: 172 LASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLI-----PAAQFGEAQDIA--NAVTF 224

Query: 250 LVHDSSEYVSGNIFIVDSG 268
              D S+Y++G    VD G
Sbjct: 225 FASDQSKYITGQTLNVDGG 243

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  180 bits (459), Expect = 3e-56
 Identities = 78/258 (30%), Positives = 130/258 (50%), Gaps = 26/258 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGAS G+G+     LA+ G +++  A      +++ D +            +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG------DNGKGM 60

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLT 134
            L+V+ N  +IE  ++   + FG +D LVNNAG++   +  L +   EEEW+ IM+TNLT
Sbjct: 61  ALNVT-NPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLMRMKEEEWSDIMETNLT 116

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             + +SK V   M    Q G +IN+ S+  T  G   G   YA++KAG+   TK ++ E+
Sbjct: 117 SIFRLSKAVLRGMMKKRQ-GRIINVGSVVGTM-GN-AGQANYAAAKAGVIGFTKSMAREV 173

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
               + VN++ PG  ++++T+ L    +   L  V     P    G   + A  S V +L
Sbjct: 174 ASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQV-----PAGRLGDPREIA--SAVAFL 226

Query: 251 VHDSSEYVSGNIFIVDSG 268
               + Y++G    V+ G
Sbjct: 227 ASPEAAYITGETLHVNGG 244

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  182 bits (464), Expect = 3e-56
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 10/205 (4%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
               +   VTG ++G+G      L   GC++  A  R D +      + +  GS    M 
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL-EAEGSGPEVMG 63

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+LDV+ +    + +  +    FG +  L NNAGV    +   + + ++W+ ++  NL G
Sbjct: 64  VQLDVA-SREGFKMAADEVEARFGPVSILCNNAGV-NLFQPIEESSYDDWDWLLGVNLHG 121

Query: 136 SWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
                     RM +       + G V+N +S+AA           Y ++K  +  +++ L
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA--FLAAGSPGIYNTTKFAVRGLSESL 179

Query: 191 SLELGVHKIRVNSICPGLFKSEITE 215
              L  ++I V+ +CPGL KS I  
Sbjct: 180 HYSLLKYEIGVSVLCPGLVKSYIYA 204

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  179 bits (457), Expect = 5e-56
 Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 23/258 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+ KV +VTGAS G+G E    LA  G  +V  A      +   + + ++     +A  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF---KARGL 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLT 134
            L++S +  +I+N   +       ID LVNNAG++   +  L +  +E+EW  ++ TNL+
Sbjct: 60  VLNIS-DIESIQNFFAEIKAENLAIDILVNNAGIT---RDNLMMRMSEDEWQSVINTNLS 115

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             + +SK     M      G +I+I S+  ++ G  PG   Y ++KAG+   +K L+ E+
Sbjct: 116 SIFRMSKECVRGMMKKRW-GRIISIGSVVGSA-GN-PGQTNYCAAKAGVIGFSKSLAYEV 172

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
               I VN + PG   +++T+ L    K      +     P    G   D A  + V +L
Sbjct: 173 ASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKI-----PSGQIGEPKDIA--AAVAFL 225

Query: 251 VHDSSEYVSGNIFIVDSG 268
             + ++Y++G    V+ G
Sbjct: 226 ASEEAKYITGQTLHVNGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  179 bits (457), Expect = 5e-56
 Identities = 76/259 (29%), Positives = 135/259 (52%), Gaps = 24/259 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMA 75
              K  +VTGAS G+GR   L LA+ G  + V  A   ++ +++ +EI  +      + A
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV---DSFA 58

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNL 133
           ++ +V+ +   ++  +++    FG +D LVNNAG++   +  L +   E+EW+ ++ TNL
Sbjct: 59  IQANVA-DADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNL 114

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G +   +    +M    + G++IN+SS+     G  PG   Y ++KAG+  +TK  + E
Sbjct: 115 KGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAV-GN-PGQANYVATKAGVIGLTKSAARE 171

Query: 194 LGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRY 249
           L    I VN++ PG   S++T+ L   +K+  L  +     PL  FG   D A  + V +
Sbjct: 172 LASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQI-----PLARFGQDTDIA--NTVAF 224

Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  D ++Y++G    V+ G
Sbjct: 225 LASDKAKYITGQTIHVNGG 243

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  180 bits (458), Expect = 6e-56
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 22/261 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAM 74
               +  ++T  + GLG++    L   G  +          ++++ +          R  
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE---RLQ 60

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNL 133
            V+ DV+     +   V++A   FG+ID L+NNAG     +  L D  E+EWN +++ NL
Sbjct: 61  FVQADVT-KKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNL 119

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINIS--SIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           T  + + K V   MR  N  G +IN       +   G      A+A++K GL ++TK ++
Sbjct: 120 TAVFHLLKLVVPVMRKQNF-GRIINYGFQGADSAP-GW-IYRSAFAAAKVGLVSLTKTVA 176

Query: 192 LELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLV 247
            E   + I  N +CPG    E+ E      ++   +N      P+   GT  D A    +
Sbjct: 177 YEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNT-----PIGRSGTGEDIA--RTI 229

Query: 248 RYLVHDSSEYVSGNIFIVDSG 268
            +L  D S+ ++G I  V   
Sbjct: 230 SFLCEDDSDMITGTIIEVTGA 250

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  180 bits (458), Expect = 1e-55
 Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 10/207 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +     +   +   A  +
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA--SAHYI 83

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
              +  +    E  V +A +  G +D L+ N   +    +            M+ N    
Sbjct: 84  AGTME-DMTFAEQFVAQAGKLMGGLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNFLSY 141

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            +++    + M   +  GS++ +SS+A   +   P   AY++SK  L+     +  E  V
Sbjct: 142 VVLTVAA-LPMLKQSN-GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSIRKEYSV 197

Query: 197 HK--IRVNSICPGLFKSEITEGLMKKD 221
            +  + +     GL  +E     +   
Sbjct: 198 SRVNVSITLCVLGLIDTETAMKAVSGI 224

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  178 bits (454), Expect = 2e-55
 Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 27/269 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            +   V ++TG +SGLG      L   G   V         ++   ++          + 
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG------NNCVF 62

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK-------SPLDLTEEEWNHI 128
              DV+ +   ++ ++  A   FGR+D  VN AG++ A K           L  E++  +
Sbjct: 63  APADVT-SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTL--EDFQRV 119

Query: 129 MKTNLTGSWLVSKYVCIRMR-----DANQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
           +  NL G++ V + V   M         Q G +IN +S+AA   GQ  G  AY++SK G+
Sbjct: 120 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-GQ-VGQAAYSASKGGI 177

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL 243
             MT  ++ +L    IRV +I PGLF + +   L +K      +   +P R  G      
Sbjct: 178 VGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSR-LGDPA-EY 235

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGATLP 272
             LV+ ++   + +++G +  +D    + 
Sbjct: 236 AHLVQAII--ENPFLNGEVIRLDGAIRMQ 262

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  178 bits (454), Expect = 4e-55
 Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 8/210 (3%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  +++ +VTGAS G+G      L + G ++V  AR V  ++ L  E  K +G     + 
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAEC-KSAGYPGTLIP 87

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLT 134
              D+S N   I +           +D  +NNAG+  A    L   +   W  +   N+ 
Sbjct: 88  YRCDLS-NEEDILSMFSAIRSQHSGVDICINNAGL--ARPDTLLSGSTSGWKDMFNVNVL 144

Query: 135 GSWLVSKYVCIRMRDAN-QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
              + ++     M++ N  +G +INI+S++      L     Y+++K  + A+T+ L  E
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 204

Query: 194 LGVHK--IRVNSICPGLFKSEITEGLMKKD 221
           L   +  IR   I PG+ +++    L  KD
Sbjct: 205 LREAQTHIRATCISPGVVETQFAFKLHDKD 234

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  178 bits (453), Expect = 4e-55
 Identities = 80/258 (31%), Positives = 130/258 (50%), Gaps = 22/258 (8%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAM 74
            L +++ +VTGAS G+GR   L+LA AG ++ V  A        +   I    G    A 
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG---EAF 81

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTN 132
           AV+ DVS   + +E       E +GR+D LVNNAG++   +  L L    ++W  ++  N
Sbjct: 82  AVKADVS-QESEVEALFAAVIERWGRLDVLVNNAGIT---RDTLLLRMKRDDWQSVLDLN 137

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L G +L S+     M    + G +INI+S+     G  PG   Y+++KAG+  +TK ++ 
Sbjct: 138 LGGVFLCSRAAAKIMLKQ-RSGRIINIASVVGEM-GN-PGQANYSAAKAGVIGLTKTVAK 194

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLV 251
           EL    I VN++ PG   +++T  L  +  L  +     PL  +G   + A   +VR+L 
Sbjct: 195 ELASRGITVNAVAPGFIATDMTSELAAEKLLEVI-----PLGRYGEAAEVA--GVVRFLA 247

Query: 252 HDS-SEYVSGNIFIVDSG 268
            D  + Y++G +  +D G
Sbjct: 248 ADPAAAYITGQVINIDGG 265

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  176 bits (448), Expect = 2e-54
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 26/258 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +  +VTGA+ G+G          G  +     R D+LK +  ++             
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG------KDVFVF 78

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLT 134
             ++S +  +I+   + A      ID LVNNAG+    +  L +   +++W+ ++  NLT
Sbjct: 79  SANLS-DRKSIKQLAEVAEREMEGIDILVNNAGI---TRDGLFVRMQDQDWDDVLAVNLT 134

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +  +++ +   M      G +INI+SI     G  PG   Y ++KAGL   +K L+ E+
Sbjct: 135 AASTLTRELIHSMMRRRY-GRIINITSIVGVV-GN-PGQTNYCAAKAGLIGFSKALAQEI 191

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
               I VN I PG  KS +T+ L    K+  +  +     P++  G   + A      YL
Sbjct: 192 ASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMI-----PMKRMGIGEEIA--FATVYL 244

Query: 251 VHDSSEYVSGNIFIVDSG 268
             D + Y++G    ++ G
Sbjct: 245 ASDEAAYLTGQTLHINGG 262

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  175 bits (446), Expect = 2e-54
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 18/206 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K+ +VTGA+ G+G E   DL++    + A  R  + L +L +              +
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEG--------VEPI 53

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           E D+       E  V K  +    +D LV+ A V  A  + +   +  EW+  +  N+  
Sbjct: 54  ESDIV-KEVLEEGGVDKL-KNLDHVDTLVHAAAV--ARDTTIEAGSVAEWHAHLDLNVIV 109

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              +S+ +   +R A+  G VI I+S A       PG   YA+SK  L  +      E  
Sbjct: 110 PAELSRQLLPALRAAS--GCVIYINSGAGNGPH--PGNTIYAASKHALRGLADAFRKEEA 165

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD 221
            + IRV+++ PG   + + +GLM   
Sbjct: 166 NNGIRVSTVSPGPTNTPMLQGLMDSQ 191

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  176 bits (448), Expect = 2e-54
 Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 24/266 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           QL  K  +VTG+++G+G+     L   G  ++   RR + +     EI +          
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEI-RAQYPDAILQP 65

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  D+       E   Q   E + ++D L+NN G+        D+ +E+W  + + N+  
Sbjct: 66  VVADLG-----TEQGCQDVIEKYPKVDILINNLGIFEP-VEYFDIPDEDWFKLFEVNIMS 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              +++    +M +  + G VI I+S AA           Y+++K    ++++ L+    
Sbjct: 120 GVRLTRSYLKKMIERKE-GRVIFIASEAAIM--PSQEMAHYSATKTMQLSLSRSLAELTT 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-------------TYPLRDFGTTDPA 242
              + VN+I PG   +E  E ++   + N   +              T  ++     +  
Sbjct: 177 GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE-E 235

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSG 268
           +  LV +L    S  ++G+   +D G
Sbjct: 236 IAHLVTFLSSPLSSAINGSALRIDGG 261

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  175 bits (445), Expect = 4e-54
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 20/264 (7%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAM 74
            L  KV +VTGAS G+GR     LA  G    +    R +  +    EI    G    A 
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG---SAF 60

Query: 75  AVELDVSANGAAIENSVQKAWEAF------GRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
           ++  ++  +   +E                 + D L+NNAG+ G      + TE+ ++ +
Sbjct: 61  SIGANLE-SLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRM 118

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
           +  N    + + +    R+RD      +INISS A   R  LP  +AY+ +K  +N MT 
Sbjct: 119 VSVNAKAPFFIIQQALSRLRDN---SRIINISSAAT--RISLPDFIAYSMTKGAINTMTF 173

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT-DPALTSLV 247
            L+ +LG   I VN+I PG  K+++   L+    +   A+        G   D A     
Sbjct: 174 TLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIA--DTA 231

Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
            +L    S +V+G +  V  G+ L
Sbjct: 232 AFLASPDSRWVTGQLIDVSGGSCL 255

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  174 bits (444), Expect = 6e-54
 Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 21/257 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           L   V ++TGAS G GR     LA+    G  ++ +AR    L+ L +E+  Q    ++ 
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-QPDLKV 62

Query: 74  MAVELDVSANGAAIENSVQKAWEAFG----RIDALVNNAGVSGAVKSPL--DLTEEEWNH 127
           +    D+    A ++  +    E       +   L+NNA   G V           E N+
Sbjct: 63  VLAAADLG-TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 128 IMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
               NLT    ++       +D+     +V+NISS+ A       G   Y + KA  + +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--LQPYKGWGLYCAGKAARDML 179

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR---TYPLRDFGTTDPAL 243
            + L+ E     +RV S  PG   +++ +   +      + S+               + 
Sbjct: 180 YQVLAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSA 237

Query: 244 TSLVRYLVHDSSEYVSG 260
             L+  L  D+  + SG
Sbjct: 238 QKLLGLLQKDT--FQSG 252

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  173 bits (441), Expect = 1e-53
 Identities = 82/257 (31%), Positives = 133/257 (51%), Gaps = 25/257 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            VV+VTGAS G+G+   L L KAGC++ V  AR     + +  +I    G   +A+    
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGG 58

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLTGS 136
           DVS   A +E  ++ A +A+G ID +VNNAG++   +  L +   + +W+ ++  NLTG 
Sbjct: 59  DVS-KEADVEAMMKTAIDAWGTIDVVVNNAGIT---RDTLLIRMKKSQWDEVIDLNLTGV 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L ++     M    ++G +INI+S+     G   G   YA++KAG+   +K  + E   
Sbjct: 115 FLCTQAATKIMMKK-RKGRIINIASVVGLI-GN-IGQANYAAAKAGVIGFSKTAAREGAS 171

Query: 197 HKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL-V 251
             I VN +CPG   S++T  L   M+K  L  +     PL   G   + A   LV +L +
Sbjct: 172 RNINVNVVCPGFIASDMTAKLGEDMEKKILGTI-----PLGRTGQPENVA--GLVEFLAL 224

Query: 252 HDSSEYVSGNIFIVDSG 268
             ++ Y++G  F +D G
Sbjct: 225 SPAASYITGQAFTIDGG 241

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  173 bits (441), Expect = 1e-53
 Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 23/256 (8%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
           +  ++TGAS G+GR   L LA+ G  +     +  ++ + + +E  ++    V  +    
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLG--A 59

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLTGS 136
           ++     A    V +A E  G +D LVNNAG++   +  L +   +E+W  +++ NL+  
Sbjct: 60  NLL-EAEAATALVHQAAEVLGGLDTLVNNAGIT---RDTLLVRMKDEDWEAVLEANLSAV 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +  ++     M  A   G ++NI+S+     G  PG   Y +SKAGL   T+ ++ E   
Sbjct: 116 FRTTREAVKLMMKARF-GRIVNITSVVGIL-GN-PGQANYVASKAGLIGFTRAVAKEYAQ 172

Query: 197 HKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVH 252
             I VN++ PG  ++E+TE L   +K+ +L  +     P   FG   + A    V +LV 
Sbjct: 173 RGITVNAVAPGFIETEMTERLPQEVKEAYLKQI-----PAGRFGRPEEVA--EAVAFLVS 225

Query: 253 DSSEYVSGNIFIVDSG 268
           + + Y++G    VD G
Sbjct: 226 EKAGYITGQTLCVDGG 241

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  173 bits (442), Expect = 1e-53
 Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 26/260 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  ++  VTG   G+G   C  L K G R+VA       R     ++            A
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGF---DFYA 67

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV---SGAVKSPLDLTEEEWNHIMKTN 132
            E +V  +  + + +  K     G ID LVNNAG+       K    +T E+W  ++ TN
Sbjct: 68  SEGNVG-DWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRK----MTREDWQAVIDTN 122

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           LT  + V+K V   M +    G +INISS+    +GQ  G   Y+++KAG++  T  L+ 
Sbjct: 123 LTSLFNVTKQVIDGMVER-GWGRIINISSVNG-QKGQ-FGQTNYSTAKAGIHGFTMSLAQ 179

Query: 193 ELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVR 248
           E+    + VN++ PG   +++ + +   + +  +  +     P+R  G+  +    S+V 
Sbjct: 180 EVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI-----PVRRLGSPDEIG--SIVA 232

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           +L  + S + +G  F ++ G
Sbjct: 233 WLASEESGFSTGADFSLNGG 252

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  173 bits (441), Expect = 1e-53
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 11/200 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV ++TGASSG+G      LA  G  +  AARRV++L++L DE+        +   +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA---KVHVL 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           ELDV+ +   ++ +V    EA G +D LVNNAG+      P+ D    +W  ++ TNL G
Sbjct: 62  ELDVA-DRQGVDAAVASTVEALGGLDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLG 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              +++     +     +G+V+ +SSIA   R  +     Y ++K G+NA ++ L  E+ 
Sbjct: 119 LMYMTRAALPHLLR--SKGTVVQMSSIAG--RVNVRNAAVYQATKFGVNAFSETLRQEVT 174

Query: 196 VHKIRVNSICPGLFKSEITE 215
              +RV  I PG   +E+  
Sbjct: 175 ERGVRVVVIEPGTTDTELRG 194

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  173 bits (442), Expect = 1e-53
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 12/206 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           + +KV+++TGAS G+G     +L  AG +I+  ARR  R++++  EI    G    A+A 
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG---TALAQ 58

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
            LDV+ +  ++    Q A + +GRID LVNNAGV     SPL  +  +EW  ++  N+ G
Sbjct: 59  VLDVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKG 115

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
                  V   M  A + G +INI SI A     +P    Y ++K  + A++  L  E  
Sbjct: 116 VLWGIGAVLPIME-AQRSGQIINIGSIGA--LSVVPTAAVYCATKFAVRAISDGLRQES- 171

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD 221
              IRV  + PG+ +SE+   +  ++
Sbjct: 172 -TNIRVTCVNPGVVESELAGTITHEE 196

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  173 bits (442), Expect = 2e-53
 Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 7/211 (3%)

Query: 11  LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS 70
           L P     +  + +TGA+SG G       A+AG  +V   RR +RL++L  E++ +    
Sbjct: 13  LVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---- 68

Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMK 130
            R + + LDV  + AA+  +V    E F  +  L+NNAG++           ++W+ ++ 
Sbjct: 69  TRVLPLTLDVR-DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVD 127

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
           TN+ G    ++ +  R+       S++N+ S+A   +   PG   Y  +KA +   +  L
Sbjct: 128 TNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAG--KWPYPGSHVYGGTKAFVEQFSLNL 185

Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKD 221
             +L    +RV ++ PGL +SE +      D
Sbjct: 186 RCDLQGTGVRVTNLEPGLCESEFSLVRFGGD 216

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  173 bits (442), Expect = 2e-53
 Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 27/266 (10%)

Query: 12  EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSS 70
            P      +V  VTG   GLG      L  AG  +    + R D + +            
Sbjct: 18  GPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGR-- 75

Query: 71  VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV---SGAVKSPLDLTEEEWNH 127
               A  +DV+ +  + E   +K    FG++D L+NNAG+   +  +K    +T+ +W+ 
Sbjct: 76  -DFKAYAVDVA-DFESCERCAEKVLADFGKVDVLINNAGITRDATFMK----MTKGDWDA 129

Query: 128 IMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
           +M+T+L   + V+K     M +  + G ++NI S+   SRG   G   YAS+KAG++  T
Sbjct: 130 VMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGSVNG-SRGA-FGQANYASAKAGIHGFT 186

Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGL----MKKDWLNNVASRTYPLRDFGTT-DPA 242
           K L+LE     I VN++ PG   + + E +    ++   L  +     P+   G   + A
Sbjct: 187 KTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQI-----PVGRLGRPDEVA 241

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSG 268
             +L+ +L  D + +V+G    ++ G
Sbjct: 242 --ALIAFLCSDDAGFVTGADLAINGG 265

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  173 bits (440), Expect = 1e-52
 Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 33/269 (12%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV----------AAARRVDRLKSLCDEINKQ 66
           +D +VV+VTGA  G+GR   L  A  G R+V          + A      +S+ DEI   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 67  SGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN 126
            G    A+A   +V A+       +Q A E FG +D LVNNAG+    +   + +EEE++
Sbjct: 85  GG---EAVADGSNV-ADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD-RMIANTSEEEFD 139

Query: 127 HIMKTNLTGSWLVSKYVCIRMRDANQE-----GSVINISSIAATSRGQL--PGGVAYASS 179
            ++  +L G +   ++     R  ++      G +IN SS A    G     G   Y+++
Sbjct: 140 AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA----GLQGSVGQGNYSAA 195

Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT 239
           KAG+  +T   + E+G + + VN+I P   ++ +TE +  +              D    
Sbjct: 196 KAGIATLTLVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAEMMATQD-----QDFDAMAP 249

Query: 240 DPALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           +  ++ LV +L    +  V+G +F V+ G
Sbjct: 250 E-NVSPLVVWLGSAEARDVTGKVFEVEGG 277

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  173 bits (441), Expect = 2e-52
 Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 25/257 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKQSGS 69
           L    V +TGAS G+G+   L  AK G  IV AA+           + +  +EI    G 
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG- 101

Query: 70  SVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIM 129
             +A+   +DV  +   I  +V+KA + FG ID LVNNA    ++ + LD   +  + +M
Sbjct: 102 --KALPCIVDVR-DEQQISAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMM 157

Query: 130 KTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKC 189
             N  G++L SK     ++ +     ++NIS     +        AY  +K G++     
Sbjct: 158 NVNTRGTYLASKACIPYLKKSKV-AHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLG 216

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY 249
           ++ E    +I VN++ P      I    M      ++             D  +      
Sbjct: 217 MAEEFK-GEIAVNALWPKTA---IHTAAM------DMLGGPGIESQCRKVD-IIADAAYS 265

Query: 250 LVHDSSEYVSGNIFIVD 266
           +        +GN  I +
Sbjct: 266 IFQKPK-SFTGNFVIDE 281

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  170 bits (433), Expect = 7e-52
 Identities = 61/296 (20%), Positives = 105/296 (35%), Gaps = 53/296 (17%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAM 74
                V +VTGA+  LGR     L   G  + +   R      +L   +N +      A+
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAI 63

Query: 75  AVELDVS----------------ANGAAIENSVQKAWEAFGRIDALVNNAGVS------- 111
            V+ D+S                         V   +  +GR D LVNNA          
Sbjct: 64  TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 123

Query: 112 ------GAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQE-----GSVINIS 160
                        +  E     +  +N    + + K    R+     +      S+IN+ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 161 SIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL--- 217
                 +  L G   Y  +K  L  +T+  +LEL   +IRVN + PGL  S + + +   
Sbjct: 184 DAMTN-QP-LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPA 239

Query: 218 MKKDWLNNVASRTYPLRD-FGTT-DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           + +   + V     PL     +  + +   +V +L    ++Y++G    VD G +L
Sbjct: 240 VWEGHRSKV-----PLYQRDSSAAEVS--DVVIFLCSSKAKYITGTCVKVDGGYSL 288

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  169 bits (430), Expect = 1e-51
 Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 17/265 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            +  K+ +VT  SSGLG    L+LA+ G R++  +R  ++L++    I     S  +   
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRI-ASLVSGAQVDI 62

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V  D+      I+   +KA    G  D LV + G        ++L  E+W+   +     
Sbjct: 63  VAGDIR-EPGDIDRLFEKA-RDLGGADILVYSTGGPRP-GRFMELGVEDWDESYRLLARS 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  V +    +M      G ++ I S+                 +  +  + + L+LEL 
Sbjct: 120 AVWVGRRAAEQMV-EKGWGRMVYIGSVTL--LRPWQDLALSNIMRLPVIGVVRTLALELA 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS---------RTYPLRDFGTTDPALTSL 246
            H + VN++ P L  ++    L ++    +  +            P+   G  +  L S+
Sbjct: 177 PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPE-ELASV 235

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATL 271
           V +L  + + +++G +  VD GA +
Sbjct: 236 VAFLASEKASFITGAVIPVDGGAHI 260

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  171 bits (434), Expect = 1e-51
 Identities = 59/295 (20%), Positives = 104/295 (35%), Gaps = 51/295 (17%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAM 74
                V +VTGA+  LGR     L   G  + +   R      +L   +N +      A+
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAI 100

Query: 75  AVELDVS----------------ANGAAIENSVQKAWEAFGRIDALVNNAGVS------- 111
            V+ D+S                         V   +  +GR D LVNNA          
Sbjct: 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 160

Query: 112 ------GAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQE-----GSVINIS 160
                        +  E     +  +N    + + K    R+     +      S+IN+ 
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 161 SIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL--- 217
                 +  L G   Y  +K  L  +T+  +LEL   +IRVN + PGL  S + + +   
Sbjct: 221 DAMTN-QP-LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPA 276

Query: 218 MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           + +   + V       +   +  + +   +V +L    ++Y++G    VD G +L
Sbjct: 277 VWEGHRSKVP----LYQRDSSAAEVS--DVVIFLCSSKAKYITGTCVKVDGGYSL 325

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  169 bits (429), Expect = 3e-51
 Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           L  K V++TGAS+G+G+   L+  +A     +++ AARR+++L+ L   I+++   + + 
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE-FPNAKV 89

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
              +LD++     I+  ++   + F  ID LVNNAG +        +  E+   +  TN+
Sbjct: 90  HVAQLDIT-QAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNV 148

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           T    +++ V    + A   G ++N+ SIA   R   P G  Y +SK  + A T  L  E
Sbjct: 149 TALINITQAVLPIFQ-AKNSGDIVNLGSIAG--RDAYPTGSIYCASKFAVGAFTDSLRKE 205

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKD 221
           L   KIRV  I PGL ++E +    + +
Sbjct: 206 LINTKIRVILIAPGLVETEFSLVRYRGN 233

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  167 bits (426), Expect = 3e-51
 Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 30/258 (11%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K  ++TGASSG+G      L K G +++ +    ++LKSL + +             
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL------KDNYTIE 65

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLT 134
             +++ N     N +         +D LV NAG+       L +   +++++ ++  NL 
Sbjct: 66  VCNLA-NKEECSNLI----SKTSNLDILVCNAGI---TSDTLAIRMKDQDFDKVIDINLK 117

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            ++++++    +M      G +INISSI   + G  PG   Y +SKAGL  MTK LS E+
Sbjct: 118 ANFILNREAIKKMIQKRY-GRIINISSIVGIA-GN-PGQANYCASKAGLIGMTKSLSYEV 174

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
               I VN++ PG  KS++T+ L    ++  +  +     PL  +G   D A    V +L
Sbjct: 175 ATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKI-----PLGTYGIPEDVA--YAVAFL 227

Query: 251 VHDSSEYVSGNIFIVDSG 268
             +++ Y++G    V+ G
Sbjct: 228 ASNNASYITGQTLHVNGG 245

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  167 bits (425), Expect = 7e-51
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 11/203 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +  ++V++TGA  G+GR    + AK   ++V        L+    +         +    
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA---KVHTF 85

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +D S N   I +S +K     G +  LVNNAGV           + +     + N+   
Sbjct: 86  VVDCS-NREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAH 143

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL-- 194
           +  +K     M   N  G ++ ++S A      +P  +AY SSK       K L+ EL  
Sbjct: 144 FWTTKAFLPAMTKNN-HGHIVTVASAAGHVS--VPFLLAYCSSKFAAVGFHKTLTDELAA 200

Query: 195 -GVHKIRVNSICPGLFKSEITEG 216
             +  ++   +CP    +   + 
Sbjct: 201 LQITGVKTTCLCPNFVNTGFIKN 223

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  166 bits (422), Expect = 1e-50
 Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 31/269 (11%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           ++ + V +VTG +SGLG      L  AG ++V    R +    +  ++        RA  
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLG------DRARF 56

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK-----SPLDLTEEEWNHIMK 130
              DV+ + AA+ +++  A E  G +  +VN AG   A++         L    +  I+ 
Sbjct: 57  AAADVT-DEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSL--AAFRKIVD 112

Query: 131 TNLTGSWLVSKYVCIRM-------RDANQEGSVINISSIAATSRGQLPGGVAYASSKAGL 183
            NL GS+ V +    R+        +A + G +IN +S+AA   GQ  G  AY++SK G+
Sbjct: 113 INLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD-GQ-IGQAAYSASKGGV 170

Query: 184 NAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL 243
             MT  ++ +L  H+IRV +I PGLF + +   L ++   +      +P R  G  D   
Sbjct: 171 VGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSR-LGNPD-EY 228

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGATLP 272
            +L  +++   +  ++G +  +D    + 
Sbjct: 229 GALAVHII--ENPMLNGEVIRLDGAIRMA 255

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  167 bits (425), Expect = 1e-50
 Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 28/266 (10%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV--------AAARRVDRLKSLCDEINKQS 67
           +L ++  +VTG  SG+GR   +  A+ G  +           A++V  L      I +  
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKAL------IEECG 99

Query: 68  GSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNH 127
               +A+ +  D+S + +   + V KA EA G +D L   AG   A+    DLT E++  
Sbjct: 100 R---KAVLLPGDLS-DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQ 155

Query: 128 IMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
               N+   + +++     +       S+I  SSI A  +   P  + YA++KA +   +
Sbjct: 156 TFAVNVFALFWITQEAIPLLPKG---ASIITTSSIQAY-QPS-PHLLDYAATKAAILNYS 210

Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITE-GLMKKDWLNNVASRTYPLRDFGTTDPA-LTS 245
           + L+ ++    IRVN + PG   + +   G   +D +     +T P++  G   PA L  
Sbjct: 211 RGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQT-PMKRAGQ--PAELAP 267

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGATL 271
           +  YL    S YV+  +  V  G  L
Sbjct: 268 VYVYLASQESSYVTAEVHGVCGGEHL 293

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  165 bits (420), Expect = 2e-50
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 34/259 (13%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
              ++ V+VTG + G+G      LA  G ++    R               SG+      
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG--------------SGAPKGLFG 57

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNL 133
           VE+DV+ +  A++ +     E  G ++ LV+NAG+S        +  TEE++  ++  NL
Sbjct: 58  VEVDVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLS---ADAFLMRMTEEKFEKVINANL 113

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
           TG++ V++     M+   + G +I I S++    G       YA+SKAG+  M + ++ E
Sbjct: 114 TGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLW-GI-GNQANYAASKAGVIGMARSIARE 170

Query: 194 LGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRY 249
           L    +  N + PG   +++T  L   +++  L  +     P +  GT  + A   +V +
Sbjct: 171 LSKANVTANVVAPGYIDTDMTRALDERIQQGALQFI-----PAKRVGTPAEVA--GVVSF 223

Query: 250 LVHDSSEYVSGNIFIVDSG 268
           L  + + Y+SG +  VD G
Sbjct: 224 LASEDASYISGAVIPVDGG 242

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  166 bits (423), Expect = 4e-50
 Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 52/270 (19%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV---------------AAARRVDRLKSLCD 61
            D +VV+VTGA  GLGR + L  A+ G  +V               +AA +V       +
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKV------VE 60

Query: 62  EINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLT 121
           EI ++ G   +A+A    V   G  +   V+ A + FGRID +VNNAG+    +S   ++
Sbjct: 61  EIRRRGG---KAVANYDSV-EAGEKL---VKTALDTFGRIDVVVNNAGILRD-RSFSRIS 112

Query: 122 EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASS 179
           +E+W+ I + +L GS+ V++     M+  N  G +I  +S +    G     G   Y+++
Sbjct: 113 DEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY-GRIIMTASAS----GIYGNFGQANYSAA 167

Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTT 239
           K GL  +   L +E   + I  N+I P    S +TE +M +D +  +             
Sbjct: 168 KLGLLGLANTLVIEGRKNNIHCNTIAPN-AGSRMTETVMPEDLVEAL------------- 213

Query: 240 DPALTS-LVRYLVHDSSEYVSGNIFIVDSG 268
            P   + LV +L H+S    +G +F V +G
Sbjct: 214 KPEYVAPLVLWLCHESC-EENGGLFEVGAG 242

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  164 bits (418), Expect = 6e-50
 Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 16/200 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K+V++TGASSG+G       ++ G  ++  ARRV+RLK+L              +  
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP---------NTLCA 64

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
           ++DV+ +    + ++ +A + +G  DA+VNNAG+   +   +      EW  +   N+ G
Sbjct: 65  QVDVT-DKYTFDTAITRAEKIYGPADAIVNNAGM--MLLGQIDTQEANEWQRMFDVNVLG 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
                + V   M+ A   G++INISSIA   +   P   AY  +K  ++A+++ +  E+ 
Sbjct: 122 LLNGMQAVLAPMK-ARNCGTIINISSIAG--KKTFPDHAAYCGTKFAVHAISENVREEVA 178

Query: 196 VHKIRVNSICPGLFKSEITE 215
              +RV +I P   K+E+  
Sbjct: 179 ASNVRVMTIAPSAVKTELLS 198

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  163 bits (416), Expect = 8e-50
 Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 34/258 (13%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             ++ V+VTG + G+G       A AG ++    R                      +AV
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS--------------GEPPEGFLAV 64

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL--TEEEWNHIMKTNLT 134
           + D++ +   +E + ++  E  G ++ L+ NAGV+   K  L +  +EE++  +++TNLT
Sbjct: 65  KCDIT-DTEQVEQAYKEIEETHGPVEVLIANAGVT---KDQLLMRMSEEDFTSVVETNLT 120

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++ V K     M  A ++G V+ ISS+     G   G   YA+SKAGL    + L+ EL
Sbjct: 121 GTFRVVKRANRAMLRA-KKGRVVLISSVVGLL-GS-AGQANYAASKAGLVGFARSLAREL 177

Query: 195 GVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPALTSLVRYL 250
           G   I  N + PG   +++T+ L    + + ++ V     PL  +    + A  + VR+L
Sbjct: 178 GSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQV-----PLGRYARPEEIA--ATVRFL 230

Query: 251 VHDSSEYVSGNIFIVDSG 268
             D + Y++G +  VD G
Sbjct: 231 ASDDASYITGAVIPVDGG 248

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  163 bits (416), Expect = 9e-50
 Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 19/258 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
            V+ +TG++SG+G      LA+AG  ++   R    ++    +++   G   R  AV   
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---ADLSTPGG---RETAVAAV 55

Query: 80  VSANGAAIENSVQKA----WEAFGRIDALVNNAGVSGAVKSPLD-LTEEEWNHIMKTNLT 134
           +   G  ++  V  A      A   +   VN  GVS  +    + L+  +    +     
Sbjct: 56  LDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +          +  A   G       +A          +AYA SK  +  + +   ++ 
Sbjct: 116 AATQPGAAELPMVE-AMLAGDEARAIELAEQQ---GQTHLAYAGSKYAVTCLARRNVVDW 171

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKK-DWLNNVASRTYPLRDFGTTDPA-LTSLVRYLVH 252
               +R+N + PG  ++ + +       +  +      PL       P  +   + +L+ 
Sbjct: 172 AGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSE--PREVAEAIAFLLG 229

Query: 253 DSSEYVSGNIFIVDSGAT 270
             + ++ G++  VD G  
Sbjct: 230 PQASFIHGSVLFVDGGMD 247

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  162 bits (413), Expect = 2e-49
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 10/192 (5%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV 80
           +V+VTGA++G G        + G +++A  RR +RL+ L DE+             +LDV
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN------LYIAQLDV 55

Query: 81  SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVS 140
             N AAIE  +      +  ID LVNNAG++  ++     + E+W  ++ TN  G   ++
Sbjct: 56  R-NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 141 KYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIR 200
           + V   M      G +INI S A        GG  Y ++KA +   +  L  +L    +R
Sbjct: 115 RAVLPGMV-ERNHGHIINIGSTAG--SWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR 171

Query: 201 VNSICPGLFKSE 212
           V  I PGL    
Sbjct: 172 VTDIEPGLVGGT 183

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  162 bits (412), Expect = 8e-49
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 15/196 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTGASSG GR        AG  ++  ARR + L  L       +    RA A+ LD
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL------VAAYPDRAEAISLD 59

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAG--VSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
           V+ +G  I+         +GR+D LVNNAG    GA +   + TE E   + + ++ G  
Sbjct: 60  VT-DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFE---ETTERELRDLFELHVFGPA 115

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            +++ +  +MR     GSV+NISS     +    G  AY+++KA L  +++ L+ E+   
Sbjct: 116 RLTRALLPQMR-ERGSGSVVNISSFGG--QLSFAGFSAYSATKAALEQLSEGLADEVAPF 172

Query: 198 KIRVNSICPGLFKSEI 213
            I+V  + PG F++ +
Sbjct: 173 GIKVLIVEPGAFRTNL 188

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  162 bits (412), Expect = 1e-48
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 26/266 (9%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV-------AAARRVDRLKSLCDEINKQSG 68
           +L  K V++TG  SG+GR   +  AK G  I          A    +       + ++ G
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY------V-EKEG 96

Query: 69  SSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHI 128
             V+ + +  D+S +    ++ VQ+     G ++ LVNN       +    +T E+    
Sbjct: 97  --VKCVLLPGDLS-DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT 153

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
            + N+   + V+K     ++       +IN +SI A   G     + Y+++K  + A T+
Sbjct: 154 FRINIFSYFHVTKAALSHLKQG---DVIINTASIVAY-EGN-ETLIDYSATKGAIVAFTR 208

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA-LTSLV 247
            LS  L    IRVN + PG   + +      +  ++   S   P++  G   P  L    
Sbjct: 209 SLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNV-PMQRPGQ--PYELAPAY 265

Query: 248 RYLVHDSSEYVSGNIFIVDSGATLPG 273
            YL    S YV+G +  V+ G  + G
Sbjct: 266 VYLASSDSSYVTGQMIHVNGGVIVNG 291

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  160 bits (408), Expect = 1e-48
 Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 35/264 (13%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            +  +VTG +SGLGR   L L   G R+V              ++ ++       + VE 
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRVVVL------------DLRREGE---DLIYVEG 46

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK-----SPLDLTEEEWNHIMKTNL 133
           DV+     +  +V +A +    + A+V+ AGV  A K      P  L  E +  +++ NL
Sbjct: 47  DVT-REEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGL--ESFRRVLEVNL 102

Query: 134 TGSWLVSKYVCIRMR-----DANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTK 188
            G++ V +     MR        Q G ++N +S+AA   GQ  G  AYA+SK G+ A+T 
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-GQ-IGQAAYAASKGGVVALTL 160

Query: 189 CLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
             + EL    IRV ++ PGLF + + +GL +K   +  A   +P R  G  +    +LV 
Sbjct: 161 PAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPR-LGRPE-EYAALVL 218

Query: 249 YLVHDSSEYVSGNIFIVDSGATLP 272
           +++   +  ++G +  +D    + 
Sbjct: 219 HIL--ENPMLNGEVVRLDGALRMA 240

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  168 bits (428), Expect = 2e-48
 Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 52/271 (19%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV---------------AAARRVDRLKSLC 60
              +KVV++TGA  GLG+ + L+ AK G ++V                AA  V       
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVV------V 58

Query: 61  DEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL 120
           DEI K  G    A+A   +V  +G  I   V+ A + FG +  ++NNAG+     S   +
Sbjct: 59  DEIVKNGG---VAVADYNNV-LDGDKI---VETAVKNFGTVHVIINNAGILRD-ASMKKM 110

Query: 121 TEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYAS 178
           TE+++  ++  +L G++ V+K      +     G ++N SS A    G     G   YAS
Sbjct: 111 TEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKY-GRIVNTSSPA----GLYGNFGQANYAS 165

Query: 179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT 238
           +K+ L    + L+ E   + I+ N+I P    S +TE +M    L  +            
Sbjct: 166 AKSALLGFAETLAKEGAKYNIKANAIAPLAR-SRMTESIMPPPMLEKL------------ 212

Query: 239 TDPALTS-LVRYLVHDSSEYVSGNIFIVDSG 268
             P   + LV YL    +  ++G  F V +G
Sbjct: 213 -GPEKVAPLVLYLSSAEN-ELTGQFFEVAAG 241

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  157 bits (399), Expect = 2e-44
 Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 40/260 (15%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKQSGSSV 71
            L +KVV++TGA +GLG+E+    AK G ++V      A +        DEI    G   
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKT------VDEIKAAGG--- 369

Query: 72  RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT 131
            A   + DV+ +  AI   ++   + +G ID LVNNAG+    +S   ++++EW+ + + 
Sbjct: 370 EAWPDQHDVAKDSEAI---IKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWDSVQQV 425

Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--PGGVAYASSKAGLNAMTKC 189
           +L G++ +S+       +    G +INI+S +    G     G   Y+SSKAG+  ++K 
Sbjct: 426 HLIGTFNLSRLAWPYFVEKQF-GRIINITSTS----GIYGNFGQANYSSSKAGILGLSKT 480

Query: 190 LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS-LVR 248
           +++E   + I+VN + P    + +T  +M               +D         + L+ 
Sbjct: 481 MAIEGAKNNIKVNIVAPHAE-TAMTLSIM-------------REQDKNLYHADQVAPLLV 526

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
           YL  D    V+G  F +  G
Sbjct: 527 YLGTDDVP-VTGETFEIGGG 545

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  159 bits (404), Expect = 3e-48
 Identities = 39/196 (19%), Positives = 82/196 (41%), Gaps = 15/196 (7%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
            ++++TGASSGLG E        G       R   +L ++ + ++   G          D
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVG------YRARD 55

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           ++ +   +E   +   +       +V++AG  G      +   E+   +++ NL+ +  V
Sbjct: 56  LA-SHQEVEQLFE---QLDSIPSTVVHSAGS-GYFGLLQEQDPEQIQTLIENNLSSAINV 110

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
            + +  R +D     +V+ I S AA  +        Y + K  +  + + + LEL    +
Sbjct: 111 LRELVKRYKDQP--VNVVMIMSTAA--QQPKAQESTYCAVKWAVKGLIESVRLELKGKPM 166

Query: 200 RVNSICPGLFKSEITE 215
           ++ ++ PG   +E  E
Sbjct: 167 KIIAVYPGGMATEFWE 182

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  157 bits (400), Expect = 6e-48
 Identities = 41/196 (20%), Positives = 72/196 (36%), Gaps = 23/196 (11%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V++TGA+ GLG       A  G  ++ + RR   L  L  E+         A A+  D++
Sbjct: 3   VLITGATGGLGGA--FARALKGHDLLLSGRRAGALAELAREV--------GARALPADLA 52

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK 141
                 E   +   E  G +D LV+  G      S  +   +    ++  +L  +  V K
Sbjct: 53  D-----ELEAKALLEEAGPLDLLVHAVGK-AGRASVREAGRDLVEEMLAAHLLTAAFVLK 106

Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRV 201
                 R   +    +   +       Q+PG  AYA++K  L A  +    EL    + +
Sbjct: 107 ----HAR-FQKGARAVFFGAYPR--YVQVPGFAAYAAAKGALEAYLEAARKELLREGVHL 159

Query: 202 NSICPGLFKSEITEGL 217
             +      + +   L
Sbjct: 160 VLVRLPAVATGLWAPL 175

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  158 bits (402), Expect = 7e-48
 Identities = 35/261 (13%), Positives = 79/261 (30%), Gaps = 36/261 (13%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
             + + V+V G    LG             + +     +              S+   + 
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------ASASVIVK 52

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           +    +     +   V K      ++DA++  AG      +      +  + + K ++  
Sbjct: 53  MTDSFTEQADQVTAEVGKL-LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWT 111

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           S + S      +++    G +    + AA      PG + Y  +K  ++ + + L+ +  
Sbjct: 112 STISSHLATKHLKEG---GLLTLAGAKAALDGT--PGMIGYGMAKGAVHQLCQSLAGKNS 166

Query: 196 V--HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT-TDPA-LTSLVRYLV 251
                    ++ P    + +    M             P  DF + T    L       +
Sbjct: 167 GMPSGAAAIAVLPVTLDTPMNRKSM-------------PEADFSSWTPLEFLVETFHDWI 213

Query: 252 HDSSEYVSGNIFIV--DSGAT 270
             +    SG++  V    G T
Sbjct: 214 TGNKRPNSGSLIQVVTTDGKT 234

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  157 bits (400), Expect = 1e-46
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 10/217 (4%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE--INKQSGSSVRAMAV 76
            K++++TGASSG GR     LA AG R+ A+ R +    +   E        + V    +
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
           ELDV  +  +++ ++ +     GRID L++NAG    G  +     T E++  +   N+ 
Sbjct: 65  ELDVQ-SQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAE---AFTPEQFAELYDINVL 120

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
            +  V++     MR   + G +I ISS ++   G  P    Y ++KA ++A+    + EL
Sbjct: 121 STQRVNRAALPHMR-RQKHGLLIWISSSSSAG-GTPPYLAPYFAAKAAMDAIAVQYAREL 178

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY 231
               I  + I PG F S            ++     Y
Sbjct: 179 SRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEY 215

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  154 bits (390), Expect = 6e-46
 Identities = 48/279 (17%), Positives = 102/279 (36%), Gaps = 59/279 (21%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
            +++++G ++G+G      L  AG +IV    R                       V  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR--------------------DAEVIAD 41

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           +S      +       +    +D LV  AG+            +   +++  N  G+  +
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATEL 93

Query: 140 SKYVCIRMRDANQEGSVINISSIAAT--------------------------SRGQLPGG 173
                  ++  +Q  + + ISS+A+                             G+  G 
Sbjct: 94  MDAFLPALKKGHQ-PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYP 232
           +AYA SK  L    +  +   G   +R+N+I PG  ++ + +  ++   +  ++A    P
Sbjct: 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPP 212

Query: 233 LRDFGTTDPA-LTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
           +       P+ + S++ +L+  ++ YV G   ++D G  
Sbjct: 213 MGRRAE--PSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  153 bits (388), Expect = 1e-45
 Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 37/260 (14%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           + +K V+V  AS G+GR     L++ G  +   AR  + LK                   
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---------------RSGH 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGV--SGAVKSPLDLTEEEWNHIMKTNLT 134
              V      +   +   +E    +D LV NAG   +G      +LT E++   + +   
Sbjct: 62  RYVV----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFF---DELTNEDFKEAIDSLFL 114

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
               + +     M++    G ++ I+S +  S   +       S++  L    K LS E+
Sbjct: 115 NMIKIVRNYLPAMKEKGW-GRIVAITSFSVIS--PIENLYTSNSARMALTGFLKTLSFEV 171

Query: 195 GVHKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
             + I VN + PG  ++E  + L+    KK   + +     P+R     +  + S+V +L
Sbjct: 172 APYGITVNCVAPGWTETERVKELLSEEKKKQVESQI-----PMRRMAKPE-EIASVVAFL 225

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
             + + Y++G   +VD G +
Sbjct: 226 CSEKASYLTGQTIVVDGGLS 245

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  160 bits (406), Expect = 3e-45
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 48/268 (17%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIV---------------AAARRVDRLKSLCD 61
            D +V +VTGA +GLGRE+ L  A+ G ++V                AA  V       D
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIV------VD 70

Query: 62  EINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLT 121
           EI K  G    A+A    V  +GA +   ++ A +AFGR+D LVNNAG+    +S +  +
Sbjct: 71  EIRKAGG---EAVADYNSV-IDGAKV---IETAIKAFGRVDILVNNAGILRD-RSLVKTS 122

Query: 122 EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKA 181
           E++WN +   +L GS+  ++     M+  N  G +I  SS +        G V Y ++K 
Sbjct: 123 EQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY-GRIIMTSSNSGI--YGNFGQVNYTAAKM 179

Query: 182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP 241
           GL  +   +++E   + +  N I P    S +TEG++     N +              P
Sbjct: 180 GLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDILFNEL-------------KP 225

Query: 242 ALTS-LVRYLVHDSSEYVSGNIFIVDSG 268
            L + +V YL H+S E  +G+     +G
Sbjct: 226 KLIAPVVAYLCHESCE-DNGSYIESAAG 252

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  153 bits (389), Expect = 9e-44
 Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 41/266 (15%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR--VDRLKSLCDEINKQSGSSVRAM 74
           LD KV +VTGA+ G+G       A+ G  +VA       + LK + D++           
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG--------GT 262

Query: 75  AVELDVSANGAAIENSVQKAWEAFG-RIDALVNNAGVSGAVKSPLD-----LTEEEWNHI 128
           A+ LDV+    A++       E  G ++D LVNNAG++       D     + E+ W+ +
Sbjct: 263 ALTLDVT-ADDAVDKITAHVTEHHGGKVDILVNNAGIT------RDKLLANMDEKRWDAV 315

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS--RGQLPGGVAYASSKAGLNAM 186
           +  NL     +++ +          G VI +SS+A  +  RGQ      YA++KAG+  +
Sbjct: 316 IAVNLLAPQRLTEGLVGNGTIGEG-GRVIGLSSMAGIAGNRGQ----TNYATTKAGMIGL 370

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRTYPLRDFGTT-DPA 242
            + L+  L    I +N++ PG  ++++TE +    ++            L   G   D A
Sbjct: 371 AEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLN-----SLFQGGQPVDVA 425

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSG 268
              L+ Y    +S  V+GN   V   
Sbjct: 426 --ELIAYFASPASNAVTGNTIRVCGQ 449

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  147 bits (372), Expect = 2e-43
 Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 35/257 (13%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           + +  V+V G    LG        K G  ++      +                   +  
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN-----------ILVDG 49

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             + +    +I      +     ++D +   AG      +      +  + ++K ++  S
Sbjct: 50  NKNWTEQEQSILEQTASS-LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSS 108

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            + +K     ++     G +    + AA   G  P  + Y  +KA ++ +T  L+ +   
Sbjct: 109 AIAAKLATTHLKPG---GLLQLTGAAAA--MGPTPSMIGYGMAKAAVHHLTSSLAAKDSG 163

Query: 197 HK--IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT-TDPA-LTSLVRYLV- 251
                 V +I P    + +    M             P  D  + T  + ++  +     
Sbjct: 164 LPDNSAVLTIMPVTLDTPMNRKWM-------------PNADHSSWTPLSFISEHLLKWTT 210

Query: 252 HDSSEYVSGNIFIVDSG 268
             SS   SG +  + + 
Sbjct: 211 ETSSRPSSGALLKITTE 227

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  144 bits (366), Expect = 5e-43
 Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 33/198 (16%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           +   +++ GAS  LG      L      ++ A R                     +  V 
Sbjct: 2   NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRH--------------------SGDVT 40

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
           +D++       +S++K +E  G++DA+V+  G         +LT E+    + + L G  
Sbjct: 41  VDITN-----IDSIKKMYEQVGKVDAIVSATGS-ATFSPLTELTPEKNAVTISSKLGGQI 94

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            +       + D    GS    + I       +  G + A +   + A  K  ++E+   
Sbjct: 95  NLVLLGIDSLNDK---GSFTLTTGIMM--EDPIVQGASAAMANGAVTAFAKSAAIEMP-R 148

Query: 198 KIRVNSICPGLFKSEITE 215
            IR+N++ P + +    +
Sbjct: 149 GIRINTVSPNVLEESWDK 166

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  147 bits (372), Expect = 2e-42
 Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 20/222 (9%)

Query: 20  KVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            VV++TG SSG+G    + LA       ++ A  R +     L +     +        +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS--GAVKSPLDLTEEEWNHIMKTNLT 134
           +LDV  +  ++  + ++  E  GR+D LV NAG+   G ++    L E+    ++  N+ 
Sbjct: 63  QLDVR-DSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLE---ALGEDAVASVLDVNVV 116

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ--LPGGVAYASSKAGLNAMTKCLSL 192
           G+  + +     M+     G V+   S+     G   LP    Y +SK  L  + + L++
Sbjct: 117 GTVRMLQAFLPDMK-RRGSGRVLVTGSVG----GLMGLPFNDVYCASKFALEGLCESLAV 171

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYP 232
            L    + ++ I  G   +   E ++   ++ L+     T+ 
Sbjct: 172 LLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFH 213

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  140 bits (356), Expect = 7e-41
 Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 26/208 (12%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              V+VTGA+ G+G      L K      I+A AR V++   L      +S    R   +
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL------KSIKDSRVHVL 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGR--IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
            L V+    +++  V K  E  G   +  L+NNAGV  +  +  +         +  N T
Sbjct: 57  PLTVT-CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 135 GSWLV----------SKYVCIRMRDANQEGSVINISSIAA-----TSRGQLPGGVAYASS 179
              L+          +       + +    +VI ISS        TS       +AY  S
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPG 207
           KA +N   + L+++L    + V + CPG
Sbjct: 176 KAAINMFGRTLAVDLKDDNVLVVNFCPG 203

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  136 bits (345), Expect = 4e-39
 Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 21/204 (10%)

Query: 20  KVVMVTGASSGLGREFC---LDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             +++TG + GLG       L+L +    +    R  ++      E+   + +      +
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ----AKELEDLAKNHSNIHIL 77

Query: 77  ELDVSANGAAIENSVQKAWEAFG--RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
           E+D+  N  A +  V           ++ L NNAG++        +  +E    ++TN  
Sbjct: 78  EIDLR-NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTV 136

Query: 135 GSWLVSKYVCIRMRDANQ----------EGSVINISSIAA-TSRGQLPGGVAYASSKAGL 183
              +++K     ++ A +            ++IN+SSI          G  AY +SK+ L
Sbjct: 137 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSAL 196

Query: 184 NAMTKCLSLELGVHKIRVNSICPG 207
           NA TK LS++L   +I   S+ PG
Sbjct: 197 NAATKSLSVDLYPQRIMCVSLHPG 220

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  130 bits (328), Expect = 3e-36
 Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 75/268 (27%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              +  +VTG + G+G E C  L+  G  +V   R V +     +++   +  +V     
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFH-- 67

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSG------------------------ 112
           +LDV+   A + +        FG++D LVNNAGV+G                        
Sbjct: 68  QLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVK 127

Query: 113 -----AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA---- 163
                  +  +  T E     +K N  G   V++ +   ++ ++    ++N+SS      
Sbjct: 128 IYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS-PRIVNVSSSTGSLK 186

Query: 164 -------------------------------------ATSRGQLPGGVAYASSKAGLNAM 186
                                                  + G    G AY +SKA LNA 
Sbjct: 187 YVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEIT 214
           T+ L+ ++   K +VN +CPGL K+E+ 
Sbjct: 247 TRVLANKIP--KFQVNCVCPGLVKTEMN 272

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  114 bits (288), Expect = 1e-30
 Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 52/241 (21%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              V +VTG + G+G     DL +     +V  AR V R ++   ++ +  G S R    
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL-QAEGLSPRFH-- 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           +LD+  +  +I        + +G +D LVNNAG++  V  P      +    MKTN  G+
Sbjct: 60  QLDID-DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP-TPFHIQAEVTMKTNFFGT 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP------------------------- 171
             V   +   ++     G V+N+SSI +    +                           
Sbjct: 118 RDVCTELLPLIKPQ---GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174

Query: 172 --------------GGVAYASSKAGLNAMTKCLSLELGVH----KIRVNSICPGLFKSEI 213
                            AY  +K G+  +++  + +L       KI +N+ CPG  ++++
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

Query: 214 T 214
            
Sbjct: 235 A 235

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 81.5 bits (202), Expect = 3e-18
 Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 50/220 (22%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              + V++TGA+SGLG     +LA+ G  ++ A R   + ++    +  Q    V    +
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ----VEVREL 69

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN---- 132
           +L          +SV++  +     D L+NNAG+      P  LT + +   + TN    
Sbjct: 70  DL-------QDLSSVRRFADGVSGADVLINNAGIMAV---PYALTVDGFESQIGTNHLGH 119

Query: 133 --LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP------------GGVAYAS 178
             LT   L      +  R       V+ +SS+A    G++               +AY+ 
Sbjct: 120 FALTNLLLPR----LTDR-------VVTVSSMAHW-PGRINLEDLNWRSRRYSPWLAYSQ 167

Query: 179 SK-AGLNAM-TKCLS--LELGVHKIRVNSICPGLFKSEIT 214
           SK A  N + T  L   L      +R  +  PG   + + 
Sbjct: 168 SKLA--NLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQ 205

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 78.8 bits (194), Expect = 3e-17
 Identities = 26/177 (14%), Positives = 53/177 (29%), Gaps = 32/177 (18%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
            +  K  +V   +  +G      LA  G  +V   R++D+ ++  D +NK+   +V A  
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE 175

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNN--AGVSGAVKSPLDLTEEEWNHIMKTNL 133
              D S              EA      +      G+         L +  W +     +
Sbjct: 176 TADDASRA------------EAVKGAHFVFTAGAIGLE-------LLPQAAWQNESSIEI 216

Query: 134 TGSWLVSKYVCIR----MRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAM 186
              +     + I          + G      ++         GG+     +A +  +
Sbjct: 217 VADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGI-------GGLKLKLHRACIAKL 266

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 54.5 bits (132), Expect = 5e-09
 Identities = 51/238 (21%), Positives = 89/238 (37%), Gaps = 41/238 (17%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALV------NN 107
             +  L   +++       ++ +  DV+ N A IE       E  G I  +       N 
Sbjct: 47  KSVHELAGTLDRND-----SIILPCDVT-NDAEIETCFASIKEQVGVIHGIAHCIAFANK 100

Query: 108 AGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISSI 162
             + G     L+   + +             +S Y    + + A     + GS++ ++ +
Sbjct: 101 EELVGEY---LNTNRDGFLLAH--------NISSYSLTAVVKAARPMMTEGGSIVTLTYL 149

Query: 163 AATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM 218
                  +P     GVA    KA L+A  K L+ +LG   IRVNSI  G  ++   +G+ 
Sbjct: 150 GGEL--VMPNYNVMGVA----KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS 203

Query: 219 KKDWLNNVASRTYPLRDFGTTDP-ALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP 275
             + +        PLR   T +    T+   +L  D S  ++G    VDSG  +    
Sbjct: 204 DFNSILKDIEERAPLRRTTTPEEVGDTAA--FLFSDMSRGITGENLHVDSGFHITARL 259

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 54.2 bits (131), Expect = 9e-09
 Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 44/249 (17%)

Query: 39  LAKAGCRIV---AAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW 95
           L + G ++V      R    L+ L +++N        A   ++DV  +   + N  ++  
Sbjct: 54  LDQLGAKLVFTYRKERSRKELEKLLEQLN-----QPEAHLYQIDVQ-SDEEVINGFEQIG 107

Query: 96  EAFGRIDALV------NNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-R 148
           +  G ID +       N   + G      + + E +             +S Y    +  
Sbjct: 108 KDVGNIDGVYHSIAFANMEDLRGRF---SETSREGFLLAQ--------DISSYSLTIVAH 156

Query: 149 DA----NQEGSVINISSIAATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIR 200
           +A     + GS++  + +       +      GVA    KA L A  K L+L+LG   IR
Sbjct: 157 EAKKLMPEGGSIVATTYLGGEF--AVQNYNVMGVA----KASLEANVKYLALDLGPDNIR 210

Query: 201 VNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRYLVHDSSEYVS 259
           VN+I  G  ++   +G+   + +        PL+          T+   YL+ D S  V+
Sbjct: 211 VNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAA--YLLSDLSSGVT 268

Query: 260 GNIFIVDSG 268
           G    VDSG
Sbjct: 269 GENIHVDSG 277

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 49/239 (20%), Positives = 98/239 (41%), Gaps = 39/239 (16%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALV------NN 107
           +RL+   +++ +  G +   +    DV+     ++       EAFG +D LV        
Sbjct: 44  ERLRPEAEKLAEALGGA---LLFRADVT-QDEELDALFAGVKEAFGGLDYLVHAIAFAPR 99

Query: 108 AGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISSI 162
             + G     +D   ++W   +         VS Y  + + R A     + G ++ ++  
Sbjct: 100 EAMEGRY---IDTRRQDWLLAL--------EVSAYSLVAVARRAEPLLREGGGIVTLTYY 148

Query: 163 AATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM 218
           A+     +P      +A    KA L A  + L+ ELG   +RVN+I  G  ++     + 
Sbjct: 149 ASEK--VVPKYNVMAIA----KAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP 202

Query: 219 KKDWLNNVASRTYPLRDFGTTDP-ALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI 276
               + +  ++T PLR   T +      L  +L+   +  ++G +  VD+G  + G+ +
Sbjct: 203 GFTKMYDRVAQTAPLRRNITQEEVGNLGL--FLLSPLASGITGEVVYVDAGYHIMGMEL 259

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 46/256 (17%)

Query: 39  LAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF 98
             +AG  + A   + D LK   + + ++ G+    +A   DV+ + A+I+   +   + +
Sbjct: 53  AREAGAEL-AFTYQGDALKKRVEPLAEELGAF---VAGHCDVA-DAASIDAVFETLEKKW 107

Query: 99  GRIDALV------NNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA- 150
           G++D LV      +   ++G     +D +E  + + M        L+S Y    + R A 
Sbjct: 108 GKLDFLVHAIGFSDKDELTGRY---IDTSEANFTNTM--------LISVYSLTAVSRRAE 156

Query: 151 ---NQEGSVINISSIAATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNS 203
                 GS++ ++   A     +P     GVA    KA L A  K L+++LG   IRVN+
Sbjct: 157 KLMADGGSILTLTYYGAEK--VMPNYNVMGVA----KAALEASVKYLAVDLGPQNIRVNA 210

Query: 204 ICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTD----PALTSLVRYLVHDSSEYVS 259
           I  G  K+    G+    ++        PLR   T D      L     Y + D S  V+
Sbjct: 211 ISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGL-----YFLSDLSRSVT 265

Query: 260 GNIFIVDSGATLPGLP 275
           G +   DSG  + G+ 
Sbjct: 266 GEVHHADSGYHVIGMK 281

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 46/256 (17%)

Query: 39  LAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF 98
           +   G  + A     +  K   D + +  G     + V  DVS +  +++N  +   E +
Sbjct: 52  VCAQGAEV-ALTYLSETFKKRVDPLAESLGVK---LTVPCDVS-DAESVDNMFKVLAEEW 106

Query: 99  GRIDALV------NNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA- 150
           G +D +V      +   + G     +D +   +   M         +S Y    +   A 
Sbjct: 107 GSLDFVVHAVAFSDKNELKGRY---VDTSLGNFLTSM--------HISCYSFTYIASKAE 155

Query: 151 ---NQEGSVINISSIAATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNS 203
                 GS++ +S   A     +P     GV     KA L A  K L+++LG  +IRVN+
Sbjct: 156 PLMTNGGSILTLSYYGAEK--VVPHYNVMGVC----KAALEASVKYLAVDLGKQQIRVNA 209

Query: 204 ICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTD----PALTSLVRYLVHDSSEYVS 259
           I  G  ++  + G+    ++        PLR   T D     AL     YL+ D     +
Sbjct: 210 ISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAAL-----YLLSDLGRGTT 264

Query: 260 GNIFIVDSGATLPGLP 275
           G    VD G  + G+ 
Sbjct: 265 GETVHVDCGYHVVGMK 280

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 26/225 (11%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA 113
           DR K    E   + GS    +    DV+ + A I+         +  +D LV++ G +  
Sbjct: 50  DRFKDRITEFAAEFGSE---LVFPCDVA-DDAQIDALFASLKTHWDSLDGLVHSIGFAPR 105

Query: 114 VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISSIAATSRG 168
                 +  +  + + + N   +  +S Y    + + A    + + S++ +S + A    
Sbjct: 106 E----AIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-- 159

Query: 169 QLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN 224
            +P     G+A    KA L A  + L++ LG   +RVN+I  G  K+    G+     + 
Sbjct: 160 AIPNYNTMGLA----KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKIL 215

Query: 225 NVASRTYPLRDFGTTDP-ALTSLVRYLVHDSSEYVSGNIFIVDSG 268
           +      PL+   T +         +L+ D +  V+  +  VDSG
Sbjct: 216 DFVESNSPLKRNVTIEQVGNAGA--FLLSDLASGVTAEVMHVDSG 258

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 26/232 (11%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA 113
           D+LK   +E   Q GS    + ++ DV+   A+I+    +  + + + D  V++ G +  
Sbjct: 45  DKLKGRVEEFAAQLGSD---IVLQCDVA-EDASIDTMFAELGKVWPKFDGFVHSIGFAPG 100

Query: 114 VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISSIAATSRG 168
                 L  +  N + +     +  +S Y  + M +      N   +++ +S + A    
Sbjct: 101 D----QLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-- 154

Query: 169 QLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN 224
            +P     G+A    KA L A  + ++  +G   +RVN+I  G  ++    G+     + 
Sbjct: 155 AIPNYNVMGLA----KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKML 210

Query: 225 NVASRTYPLRDFGTT-DPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP 275
                  P+R   T  D   ++   +L  D S  +SG +  VD G ++  + 
Sbjct: 211 AHCEAVTPIRRTVTIEDVGNSAA--FLCSDLSAGISGEVVHVDGGFSIAAMN 260

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 39/238 (16%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALV------NN 107
           + L+     I ++  S       ELDVS      ++      +  G +D +V        
Sbjct: 42  ESLEKRVRPIAQELNSP---YVYELDVS-KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPK 97

Query: 108 AGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISSI 162
             + G++   L+ ++  +N  M         +S Y  I +        N   SV+ +S +
Sbjct: 98  EALEGSL---LETSKSAFNTAM--------EISVYSLIELTNTLKPLLNNGASVLTLSYL 146

Query: 163 AATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM 218
            +T    +      G+A    KA L +  + L+++LG H IRVN++  G  ++  + G+ 
Sbjct: 147 GSTK--YMAHYNVMGLA----KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA 200

Query: 219 KKDWLNNVASRTYPLRDFGTTDP-ALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP 275
               +        PLR   + +      +  YL+   S  VSG +  VD+G  + G+ 
Sbjct: 201 DFRMILKWNEINAPLRKNVSLEEVGNAGM--YLLSSLSSGVSGEVHFVDAGYHVMGMG 256

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 47/250 (18%), Positives = 98/250 (39%), Gaps = 33/250 (13%)

Query: 39  LAKAGCRIVA--AARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE 96
           + + G  +      +  DR++ LC E N        A  +  DV  +   I++   +  +
Sbjct: 48  MHREGAELAFTYVGQFKDRVEKLCAEFNP-------AAVLPCDVI-SDQEIKDLFVELGK 99

Query: 97  AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA----- 150
            +  +DA+V++   +        L     + + +   + +  +S Y    + ++      
Sbjct: 100 VWDGLDAIVHSIAFAPRD----QLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK 155

Query: 151 NQEGSVINISSIAATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICP 206
           N+  S++ ++ I A     +P     GVA    KA L A  +  +L LG   I+VN++  
Sbjct: 156 NRNASMVALTYIGAEK--AMPSYNTMGVA----KASLEATVRYTALALGEDGIKVNAVSA 209

Query: 207 GLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRYLVHDSSEYVSGNIFIV 265
           G  K+    G+     + +  +   PL+          T    +L  D +  ++G +  V
Sbjct: 210 GPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVA--FLCSDMATGITGEVVHV 267

Query: 266 DSGATLPGLP 275
           D+G     + 
Sbjct: 268 DAGYHCVSMG 277

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 40/239 (16%)

Query: 54  DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALV------NN 107
            +L+    EI K  GS    + V+ DVS     I+N  +   E +G +D +V        
Sbjct: 57  PKLEKRVREIAKGFGSD---LVVKCDVS-LDEDIKNLKKFLEENWGSLDIIVHSIAYAPK 112

Query: 108 AGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA-----NQEGSVINISS 161
               G V   +D + E +   M         +S Y  I + R+       + G+++ +S 
Sbjct: 113 EEFKGGV---IDTSREGFKIAM--------DISVYSLIALTRELLPLMEGRNGAIVTLSY 161

Query: 162 IAATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL 217
             A     +P     G+A    KA L +  + L+ ++  H  R+N+I  G  K+     +
Sbjct: 162 YGAEK--VVPHYNVMGIA----KAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI 215

Query: 218 MKKDWLNNVASRTYPLRDFGTTDP-ALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP 275
                L    ++  P     T +    T++  +L  D +  ++G +  VD+G  + G+ 
Sbjct: 216 TGFHLLMEHTTKVNPFGKPITIEDVGDTAV--FLCSDWARAITGEVVHVDNGYHIMGVF 272

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 51.8 bits (124), Expect = 7e-08
 Identities = 55/286 (19%), Positives = 103/286 (36%), Gaps = 39/286 (13%)

Query: 14  WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           W  + +       +S      F      +     AA + VD +      ++    +    
Sbjct: 43  WPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTP--- 99

Query: 74  MAVELDVSAN-------GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEW 125
             V  +VS+N       G  I    +      G+ID LV++      V  P L  + + +
Sbjct: 100 QDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGY 159

Query: 126 NHIMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISSIAATSRGQLPG-GVAYASS 179
              +          S Y  + + +       + GS + +S IA+     +PG G   +S+
Sbjct: 160 LAAV--------SSSSYSFVSLLQHFLPLMKEGGSALALSYIASEK--VIPGYGGGMSSA 209

Query: 180 KAGLNAMTKCLSLELGV-HKIRVNSICPGLFK-------SEITEGLMKKDWLNNVASRTY 231
           KA L +  + L+ E G    +RVN I  G  K        +  +       ++   +   
Sbjct: 210 KAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANA- 268

Query: 232 PL-RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI 276
           PL ++  + D    +L  +L+   +  V+G    VD+G    G  +
Sbjct: 269 PLQKELESDDVGRAAL--FLLSPLARAVTGATLYVDNGLHAMGQAL 312

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 27/241 (11%)

Query: 48  AAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNN 107
            +   + ++  L    +          A +    ++   ++ + +   + FG ID LV++
Sbjct: 67  GSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHS 126

Query: 108 AGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISS 161
                 V  P L+ + + +   +          S Y  + +        N  G+ I+++ 
Sbjct: 127 LANGPEVSKPLLETSRKGYLAAI--------SASSYSFVSLLSHFLPIMNPGGASISLTY 178

Query: 162 IAATSRGQLPG-GVAYASSKAGLNAMTKCLSLELG-VHKIRVNSICPGLFKSEITEGLMK 219
           IA+     +PG G   +S+KA L + T+ L+ E G    IRVN+I  G   S   + +  
Sbjct: 179 IASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF 236

Query: 220 KDWLNNVASRTYPLRDFGTTD----PALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP 275
            D +   +    P++   T D     A      +LV   +  ++G    VD+G    G+ 
Sbjct: 237 IDTMIEYSYNNAPIQKTLTADEVGNAAA-----FLVSPLASAITGATIYVDNGLNSMGVA 291

Query: 276 I 276
           +
Sbjct: 292 L 292

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 44/228 (19%)

Query: 76  VELDVSAN-------GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNH 127
           V  D+  N       G  I+    K  +  G ID LV++      V  P L+ + + +  
Sbjct: 89  VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLA 148

Query: 128 IMKTNLTGSWLVSKYVCIRM-RDA----NQEGSVINISSIAATSRGQLPG-----GVAYA 177
                       S Y  + + +      N+ GS + +S +AA     +PG       A  
Sbjct: 149 AS--------SNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAER--VVPGYGGGMSSA-- 196

Query: 178 SSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFK-------SEITEGLMKKDWLNNVASR 229
             KA L + T+ L+ E G  + +RVN+I  G  K        +  E       ++   + 
Sbjct: 197 --KAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNN 254

Query: 230 TYPL-RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI 276
             PL RD  + D    +L  +L+   +  VSG    VD+G    G  +
Sbjct: 255 A-PLRRDLHSDDVGGAAL--FLLSPLARAVSGVTLYVDNGLHAMGQAV 299

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 47/260 (18%), Positives = 87/260 (33%), Gaps = 55/260 (21%)

Query: 39  LAKAGCRIV----AAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN---SV 91
             + G ++V       R + R+               +A  +ELDV  N   + +    V
Sbjct: 29  AQEQGAQLVLTGFDRLRLIQRITDRLPA---------KAPLLELDVQ-NEEHLASLAGRV 78

Query: 92  QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG---SWLVSKYVCIRMR 148
            +A  A  ++D +V++ G           T    N               +S Y    M 
Sbjct: 79  TEAIGAGNKLDGVVHSIGFM-------PQTGMGINPFFDAPYADVSKGIHISAYSYASMA 131

Query: 149 DA-----NQEGSVINISSIAATSRGQLPG----GVAYASSKAGLNAMTKCLSLELGVHKI 199
            A     N  GS++ +    + +   +P      VA    K+ L ++ + ++ E G + +
Sbjct: 132 KALLPIMNPGGSIVGMDFDPSRA---MPAYNWMTVA----KSALESVNRFVAREAGKYGV 184

Query: 200 RVNSICPGLFK----SEITEGLMKKDW-------LNNVASRTYPLRDFGTTDPALTSLVR 248
           R N +  G  +    S I  G + ++              R  P+         +   V 
Sbjct: 185 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA-PIGWNMKDATPVAKTVC 243

Query: 249 YLVHDSSEYVSGNIFIVDSG 268
            L+ D     +G+I   D G
Sbjct: 244 ALLSDWLPATTGDIIYADGG 263

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 18/99 (18%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           + + G++  +G+     L+    +I A AR+V+++                  AV  DV 
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVD 51

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL 120
                +        +    +DA++N +G  G     +DL
Sbjct: 52  WTPEEMA-------KQLHGMDAIINVSGSGGKSLLKVDL 83

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.92
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.91
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.89
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.89
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.89
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.89
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.89
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.89
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.89
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.89
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.88
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.88
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.88
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.88
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.88
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.88
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.88
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.87
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.87
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.87
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.87
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.87
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.86
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.86
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.86
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.86
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.86
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.85
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.85
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.84
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.83
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.83
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.83
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.82
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.82
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.82
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.82
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.81
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.81
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.81
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.81
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.8
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.79
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.79
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.78
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.78
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.78
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.77
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.77
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.76
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.75
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.72
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.71
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.69
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.68
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.67
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.66
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.63
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.61
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.58
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.57
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.55
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.33
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.31
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.16
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.08
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.84
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.8
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.63
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.59
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.56
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.55
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.54
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.53
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.52
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.51
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.51
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.49
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.36
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.35
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.34
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.3
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.27
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.25
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.24
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.23
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.2
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.2
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.19
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.18
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.16
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.13
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.11
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.04
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.02
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.02
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.98
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.97
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.97
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.95
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.93
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.91
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.9
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.87
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.84
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.84
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.84
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.81
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.8
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.78
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.77
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.76
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.74
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.73
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.71
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.7
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.67
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.66
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.64
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.63
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.62
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.62
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.62
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.6
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.59
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.58
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.58
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.58
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.57
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.55
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.54
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.53
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.52
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.52
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.5
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.43
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.41
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.4
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.39
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.36
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.36
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.35
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.33
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.3
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.29
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.28
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.27
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.27
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.23
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.22
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.2
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.19
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.15
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.02
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.0
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.97
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.97
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.95
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.95
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.93
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.92
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.92
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.9
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.89
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.87
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.86
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.85
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.84
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.83
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.83
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.82
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.82
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.82
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.82
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.82
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.81
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.8
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.8
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.78
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.76
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.76
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.75
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.75
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.71
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.7
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.69
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.69
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.64
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.64
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.63
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.62
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.62
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.59
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.57
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.54
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.53
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.51
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.5
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.49
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.49
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.46
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.43
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.41
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.39
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.37
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.37
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.35
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.33
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.3
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.3
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.29
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.28
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.26
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.25
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.24
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.24
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.23
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.23
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.22
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.2
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.18
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.18
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.18
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.17
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.16
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.15
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.15
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.14
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.13
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.06
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.06
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.06
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.05
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.02
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.02
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.93
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.89
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.89
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.87
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.81
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.8
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.8
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.79
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.79
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.76
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	95.76
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.75

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3.5e-62  Score=409.03  Aligned_cols=251  Identities=29%  Similarity=0.484  Sum_probs=231.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      .+++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+..   .++..+.+|++ +.++++++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~-~~~~v~~~~~   78 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVT-DELAIEAAFS   78 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT-CHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCC-CHHHHHHHHH
Confidence            5679999999999999999999999999999999999999999999999997753   37889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+++|++|+||||||+. ...++.+++.|+|++.+++|+.|++.++|+++|+|.+++++|+|||+||..+..  +.++
T Consensus        79 ~~~~~~G~iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~--~~~~  155 (255)
T 4g81_D           79 KLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA--ARPT  155 (255)
T ss_dssp             HHHHTTCCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--BCTT
T ss_pred             HHHHHCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC--CCCC
Confidence            9999999999999999986 557889999999999999999999999999999998766679999999999877  6788


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|+.+|+|++|.|++++|||||+|+||+++|++......++...+......|++|+++|+ |+|+++.||+|
T Consensus       156 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-diA~~v~fL~S  234 (255)
T 4g81_D          156 VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPE-ELIGTAIFLSS  234 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999876655454555555568999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.++|+|||+|.||||++-
T Consensus       235 ~~a~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          235 KASDYINGQIIYVDGGWLA  253 (255)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhCCCcCCEEEECCCeEe
Confidence            9999999999999999863

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.5e-61  Score=402.73  Aligned_cols=249  Identities=29%  Similarity=0.473  Sum_probs=226.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..   .++.++.+|++ +.++++++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt-~~~~v~~~~~~~   78 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVS-KKKDVEEFVRRT   78 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCC-CHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999997643   47899999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .++||++|+||||||+.....++.+++.|+|++.+++|+.++++++|+++|+|++++ .|+|||+||..+..  +.++..
T Consensus        79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~--~~~~~~  155 (254)
T 4fn4_A           79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIR--GGFAGA  155 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--SSSSCH
T ss_pred             HHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcC--CCCCCh
Confidence            999999999999999875567888999999999999999999999999999998865 79999999999887  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++......  +...........|++|+++|+ |+|+++.||+|
T Consensus       156 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pe-diA~~v~fLaS  234 (254)
T 4fn4_A          156 PYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPE-DIANVIVFLAS  234 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHhC
Confidence            999999999999999999999999999999999999999765432  222333444446889999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.++|+|||+|.||||+++
T Consensus       235 d~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          235 DEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCEEEeCCCccc
Confidence            9999999999999999986

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2e-59  Score=388.79  Aligned_cols=244  Identities=28%  Similarity=0.439  Sum_probs=213.7

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.++|+||++|||||++|||+++|+.|+++|++|++++|+..  ++..+++.+.   +.++..+.+|++ +.++++++++
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~---g~~~~~~~~Dv~-d~~~v~~~~~   76 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD---GGNASALLIDFA-DPLAAKDSFT   76 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTT-STTTTTTSST
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh---CCcEEEEEccCC-CHHHHHHHHH
Confidence            346899999999999999999999999999999999999854  3444555543   347889999999 6666666553


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                           ++++|+||||||+. ...++.+++.++|++.+++|+.|+|+++|+++|+|.+++++|+|||+||..+..  +.++
T Consensus        77 -----~g~iDiLVNNAGi~-~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~--g~~~  148 (247)
T 4hp8_A           77 -----DAGFDILVNNAGII-RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ--GGIR  148 (247)
T ss_dssp             -----TTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCSS
T ss_pred             -----hCCCCEEEECCCCC-CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC--CCCC
Confidence                 48999999999986 457888999999999999999999999999999998766679999999999887  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|+.+|+|++|.||+++|||||+|+||+++|++.+....++...+......|++|+++|+ |+|+++.||+|
T Consensus       149 ~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~fLaS  227 (247)
T 4hp8_A          149 VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSE-DIAGAAVFLSS  227 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTH-HHHHHHHHHTS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999876554444444445568999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++++|+|||+|.||||++.
T Consensus       228 d~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          228 AAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCeEEECccccc
Confidence            9999999999999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.4e-58  Score=389.17  Aligned_cols=242  Identities=27%  Similarity=0.403  Sum_probs=214.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++..+.+|++ +.++++++++++.
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g------~~~~~~~~Dv~-~~~~v~~~~~~~~   98 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG------GGAVGIQADSA-NLAELDRLYEKVK   98 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTCEEEECCTT-CHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------CCeEEEEecCC-CHHHHHHHHHHHH
Confidence            5999999999999999999999999999999999999999988887762      36788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      ++||++|+||||||.. ...++.+++.|+|++.+++|+.++++++|+++|+|++   .|+||+++|..+..  +.|+...
T Consensus        99 ~~~G~iDiLVNNAG~~-~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~--~~~~~~~  172 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGG-SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGST--GTPAFSV  172 (273)
T ss_dssp             HHHSCEEEEEECCCCC-CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGS--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhcc--CCCCchH
Confidence            9999999999999985 5678999999999999999999999999999999964   58999999999877  6788999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-----hhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-----DWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      |++||+|+.+|+|++|.|++++|||||+|+||+++|++......+     +...+......|++|+++|+ |+|+++.||
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~FL  251 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAE-EVAAAALFL  251 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999987655321     12223334458999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +|+.++|+|||+|.||||++.
T Consensus       252 aSd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          252 ASDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hCchhcCccCCeEeECcChhh
Confidence            999999999999999999864

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.5e-57  Score=376.82  Aligned_cols=234  Identities=27%  Similarity=0.450  Sum_probs=202.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++.         ...++..+.+|++ +.+++++++    
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---------~~~~~~~~~~Dv~-~~~~v~~~~----   73 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---------RHPRIRREELDIT-DSQRLQRLF----   73 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---------CCTTEEEEECCTT-CHHHHHHHH----
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---------hcCCeEEEEecCC-CHHHHHHHH----
Confidence            46999999999999999999999999999999999998765431         2347888999999 677776665    


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|+||||||+.   .+..+++.++|++.+++|+.+++.++|+++|+|+++  +|+|||+||..+..  +.++...
T Consensus        74 ~~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~--~~~~~~~  146 (242)
T 4b79_A           74 EALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTF--GSADRPA  146 (242)
T ss_dssp             HHCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTS--CCSSCHH
T ss_pred             HhcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccC--CCCCCHH
Confidence            4689999999999985   356688999999999999999999999999999764  59999999999887  6788999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|+.+|+|++|.||+++|||||+|+||+++|+|......++...+......|++|+++|+ |+|+++.||+|+.+
T Consensus       147 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~fLaSd~a  225 (242)
T 4b79_A          147 YSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAP-EVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHH-HHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999877655444444444558999999999 99999999999999


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      +|+|||+|.||||++.
T Consensus       226 ~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          226 SFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCccCceEEECccHhh
Confidence            9999999999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.2e-56  Score=375.33  Aligned_cols=246  Identities=26%  Similarity=0.396  Sum_probs=211.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..+. .+++.+..   .++.++.+|++ +.++++++++++
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~~~---~~~~~~~~Dv~-~~~~v~~~v~~~   77 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQRQ---PRATYLPVELQ-DDAQCRDAVAQT   77 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHHHC---TTCEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHhcC---CCEEEEEeecC-CHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999876543 34454433   37888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .++||++|+||||||+. . ..+.+.+.|+|++.+++|+.+++.++|+++|+|+++  +|+|||+||..+..  +.++..
T Consensus        78 ~~~~G~iDiLVNnAGi~-~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~--~~~~~~  151 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVN-D-GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVT--GQGNTS  151 (258)
T ss_dssp             HHHHSCCCEEEECCCCC-C-CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHH--CCSSCH
T ss_pred             HHHhCCCCEEEECCCCC-C-CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhcc--CCCCch
Confidence            99999999999999985 2 344578999999999999999999999999999764  59999999999887  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCCCC-CCCCChHHHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLR-DFGTTDPALTSLVRY  249 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p~~-~~~~~~~~va~~~~~  249 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+....    .+..........|++ |+++|+ |+|+++.|
T Consensus       152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pe-eiA~~v~f  230 (258)
T 4gkb_A          152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPD-EIADTAVF  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHH-HHHHHHHH
Confidence            999999999999999999999999999999999999999865432    112222333457885 999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+|+.++|+|||+|.||||++-.
T Consensus       231 LaS~~a~~iTG~~i~VDGG~T~l  253 (258)
T 4gkb_A          231 LLSPRASHTTGEWLFVDGGYTHL  253 (258)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTTS
T ss_pred             HhCchhcCccCCeEEECCCcchh
Confidence            99999999999999999999743

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=7.8e-56  Score=373.54  Aligned_cols=249  Identities=20%  Similarity=0.237  Sum_probs=221.8

Q ss_pred             cCCCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      |++|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+.+.+..+  .++.++.+|++ +.+++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~-~~~~v~~~~   77 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ--PEAHLYQIDVQ-SDEEVINGF   77 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC--SSCEEEECCTT-CHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CcEEEEEccCC-CHHHHHHHH
Confidence            5789999999999875  999999999999999999999999999998888876543  36788999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      +++.+.+|++|++|||||+...   ..++.+.+.++|...+++|+.+++.+++++.++|++   +|+||++||..+..  
T Consensus        78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~--  152 (256)
T 4fs3_A           78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEF--  152 (256)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTS--
T ss_pred             HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEecccccc--
Confidence            9999999999999999997532   235567899999999999999999999999887643   69999999999877  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +.+++..|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+.....+...+......|++|+++|+ |+|+++.
T Consensus       153 ~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-evA~~v~  231 (256)
T 4fs3_A          153 AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQV-EVGKTAA  231 (256)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHH
T ss_pred             CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            678899999999999999999999999999999999999999999887655444444444458999999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||+|+.++|+|||+|.||||++.
T Consensus       232 fL~Sd~a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          232 YLLSDLSSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCCEEEECcCHHh
Confidence            99999999999999999999975

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.8e-55  Score=364.77  Aligned_cols=232  Identities=28%  Similarity=0.456  Sum_probs=206.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|+||||||++|||+++|++|+++|++|++++|+++.++++.++       ..++.++.+|++ +.++++++++++.+++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~-~~~~v~~~v~~~~~~~   73 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-------RPNLFYFHGDVA-DPLTLKKFVEYAMEKL   73 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-------CTTEEEEECCTT-SHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-------cCCEEEEEecCC-CHHHHHHHHHHHHHHc
Confidence            59999999999999999999999999999999998877765443       236888999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      |++|+||||||.. ...++.+++.|+|++.+++|+.+++.++|+++|+|.++  +|+||++||..+..  +.|+...|++
T Consensus        74 g~iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~--~~~~~~~Y~a  148 (247)
T 3ged_A           74 QRIDVLVNNACRG-SKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQ--SEPDSEAYAS  148 (247)
T ss_dssp             SCCCEEEECCCCC-CCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTS--CCTTCHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeeccccc--CCCCCHHHHH
Confidence            9999999999986 55788899999999999999999999999999999864  59999999999887  6788999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcc
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYV  258 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i  258 (280)
                      ||+|+.+|+|++|.|+++ |||||+|+||+++|++......     + .....|++|+++|+ |+|+++.||+|+  +|+
T Consensus       149 sKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~-----~-~~~~~Pl~R~g~pe-diA~~v~fL~s~--~~i  218 (247)
T 3ged_A          149 AKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ-----E-DCAAIPAGKVGTPK-DISNMVLFLCQQ--DFI  218 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH-----H-HHHTSTTSSCBCHH-HHHHHHHHHHHC--SSC
T ss_pred             HHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH-----H-HHhcCCCCCCcCHH-HHHHHHHHHHhC--CCC
Confidence            999999999999999997 9999999999999998765432     2 22348999999999 999999999984  699


Q ss_pred             cccEEEeCCcccCCC
Q 023555          259 SGNIFIVDSGATLPG  273 (280)
Q Consensus       259 ~G~~i~vdgG~~~~~  273 (280)
                      |||+|.||||++...
T Consensus       219 TG~~i~VDGG~s~r~  233 (247)
T 3ged_A          219 TGETIIVDGGMSKRM  233 (247)
T ss_dssp             CSCEEEESTTGGGCC
T ss_pred             CCCeEEECcCHHHhC
Confidence            999999999998654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.5e-55  Score=371.32  Aligned_cols=242  Identities=21%  Similarity=0.347  Sum_probs=209.1

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +..+++|+||++|||||++|||+++|++|+++|++|++++|+.++.             ..+..++.+|++ +.++++++
T Consensus         3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~~Dv~-~~~~v~~~   68 (261)
T 4h15_A            3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-------------LPEELFVEADLT-TKEGCAIV   68 (261)
T ss_dssp             CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------SCTTTEEECCTT-SHHHHHHH
T ss_pred             chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-------------CCcEEEEEcCCC-CHHHHHHH
Confidence            3456799999999999999999999999999999999999975421             113446899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      ++++.+++|++|+||||||+... ..++.+++.|+|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +
T Consensus        69 ~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~--~  145 (261)
T 4h15_A           69 AEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVL--P  145 (261)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C
T ss_pred             HHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhcc--C
Confidence            99999999999999999997533 35778999999999999999999999999999998765 79999999998876  4


Q ss_pred             CC-CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch------------hhhhhhhhcCCCCCCC
Q 023555          170 LP-GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK------------DWLNNVASRTYPLRDF  236 (280)
Q Consensus       170 ~~-~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~------------~~~~~~~~~~~p~~~~  236 (280)
                      .| +...|++||+|+.+|+|++|.|++++|||||+|+||+++|++.......            ...........|++|+
T Consensus       146 ~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~  225 (261)
T 4h15_A          146 LPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRP  225 (261)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCC
Confidence            44 5688999999999999999999999999999999999999986543211            1111122345899999


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ++|+ |+|+++.||+|+.++|+|||+|.||||+.
T Consensus       226 g~pe-evA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          226 AKPE-EVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             BCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             cCHH-HHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence            9999 99999999999999999999999999974

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=9.6e-52  Score=350.65  Aligned_cols=256  Identities=31%  Similarity=0.464  Sum_probs=227.3

Q ss_pred             CCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555            9 LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus         9 ~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      +....++++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.++++
T Consensus        10 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~-~~~~v~   86 (266)
T 4egf_A           10 DRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLA-EPDAPA   86 (266)
T ss_dssp             CCBCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTT-STTHHH
T ss_pred             hhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCC-CHHHHH
Confidence            344567789999999999999999999999999999999999999999988888866433  36888999999 789999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++++++.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..+..  
T Consensus        87 ~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--  163 (266)
T 4egf_A           87 ELARRAAEAFGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA--  163 (266)
T ss_dssp             HHHHHHHHHHTSCSEEEEECCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--
T ss_pred             HHHHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc--
Confidence            99999999999999999999986 346777899999999999999999999999999998765578999999998876  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|++|+.+|+ |+|+++.
T Consensus       164 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~v~  242 (266)
T 4egf_A          164 PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPH-EVSDAVV  242 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHH-HHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            668889999999999999999999999999999999999999998765433232333334458999999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||+++.++++||++|.+|||+++
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCcEEEECCCccC
Confidence            99999999999999999999976

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.8e-51  Score=350.66  Aligned_cols=256  Identities=30%  Similarity=0.505  Sum_probs=219.2

Q ss_pred             CCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           10 DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      -+.+++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.+++++
T Consensus        19 ~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-d~~~v~~   94 (283)
T 3v8b_A           19 YFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA---GGQAIALEADVS-DELQMRN   94 (283)
T ss_dssp             --------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT---TCCEEEEECCTT-CHHHHHH
T ss_pred             hhhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHH
Confidence            345778899999999999999999999999999999999999999999988888653   347889999999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+....+
T Consensus        95 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~  173 (283)
T 3v8b_A           95 AVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFT  173 (283)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCC
Confidence            99999999999999999999875557888999999999999999999999999999998754 78999999988765334


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhh-----hhhhhcCCCC--CCCCCChHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL-----NNVASRTYPL--RDFGTTDPA  242 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~-----~~~~~~~~p~--~~~~~~~~~  242 (280)
                      .++...|++||+|++.|+++++.|++++||+||+|+||+++|++..........     .+......|+  +|+++|+ |
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pe-d  252 (283)
T 3v8b_A          174 TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE-D  252 (283)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHH-H
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHH-H
Confidence            577889999999999999999999999999999999999999997654221111     2223334576  9999999 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +|+++.||+++.++++||++|.+|||+++
T Consensus       253 vA~~v~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          253 VAELIRFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHcCccccCCcCCEEEECcCccc
Confidence            99999999999999999999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=9.2e-51  Score=342.74  Aligned_cols=249  Identities=27%  Similarity=0.470  Sum_probs=222.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-d~~~v~~~~~   81 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA---GGKAIGLECNVT-DEQHREAVIK   81 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHHHHHH
Confidence            345799999999999999999999999999999999999999999888888664   347889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++
T Consensus        82 ~~~~~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  156 (256)
T 3gaf_A           82 AALDQFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGEN--TNVR  156 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTC--CCTT
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcC--CCCC
Confidence            99999999999999999864 3455 889999999999999999999999999998754 78999999998876  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++......++... ......|++|+++|+ |+|+++.||++
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~p~~r~~~~~-dva~~~~~L~s  234 (256)
T 3gaf_A          157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIER-AMLKHTPLGRLGEAQ-DIANAALFLCS  234 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHH-HHHTTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHH-HHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            8999999999999999999999999999999999999999876544333333 334458999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCC
Q 023555          253 DSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.+.++||++|.+|||+..+
T Consensus       235 ~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          235 PAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             GGGTTCCSCEEEESTTSCCC
T ss_pred             CcccCccCCEEEECCCcccc
Confidence            99999999999999998765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1e-50  Score=343.58  Aligned_cols=252  Identities=27%  Similarity=0.445  Sum_probs=224.9

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +|+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..  ..++.++.+|++ +.++++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~-~~~~v~~~~~   80 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIGVQTDVS-DRAQCDALAG   80 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--SSCEEEEECCTT-SHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCcEEEEEcCCC-CHHHHHHHHH
Confidence            5678999999999999999999999999999999999999999999988887643  237889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc-cCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT-SRGQLP  171 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~-~~~~~~  171 (280)
                      ++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+. .  +.+
T Consensus        81 ~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~  156 (262)
T 3pk0_A           81 RAVEEFGGIDVVCANAGVF-PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPIT--GYP  156 (262)
T ss_dssp             HHHHHHSCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTB--CCT
T ss_pred             HHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC--CCC
Confidence            9999999999999999986 446788999999999999999999999999999998754 6899999998875 4  567


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ++..|++||+|++.|+++++.|++++||+||+|+||+++|++..... .++.. ......|++++++|+ |+|+++.||+
T Consensus       157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~-~~~~~~p~~r~~~p~-dva~~v~~L~  233 (262)
T 3pk0_A          157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG-EEYIA-SMARSIPAGALGTPE-DIGHLAAFLA  233 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC-HHHHH-HHHTTSTTSSCBCHH-HHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC-HHHHH-HHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            88999999999999999999999999999999999999999876432 22333 334458999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCCCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      ++.++++||++|.+|||+.++..
T Consensus       234 s~~~~~itG~~i~vdGG~~~~~~  256 (262)
T 3pk0_A          234 TKEAGYITGQAIAVDGGQVLPES  256 (262)
T ss_dssp             SGGGTTCCSCEEEESTTTTCCSS
T ss_pred             CccccCCcCCEEEECCCeecCcc
Confidence            99999999999999999998643

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=5.9e-51  Score=342.36  Aligned_cols=245  Identities=29%  Similarity=0.520  Sum_probs=219.9

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++..      +...+.+|++ +.++++++++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~-d~~~v~~~~~   75 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD------NGKGMALNVT-NPESIEAVLK   75 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTT-CHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc------cceEEEEeCC-CHHHHHHHHH
Confidence            46789999999999999999999999999999999999999998888877743      4678899999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|++|||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++
T Consensus        76 ~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~  151 (248)
T 3op4_A           76 AITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTM--GNAG  151 (248)
T ss_dssp             HHHHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTT
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC--CCCC
Confidence            9999999999999999986 446777889999999999999999999999999998754 78999999998877  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.... +... ......|++++.+|+ |+|+++.||++
T Consensus       152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~-~~~~~~p~~r~~~p~-dva~~v~~L~s  228 (248)
T 3op4_A          152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND-EQRT-ATLAQVPAGRLGDPR-EIASAVAFLAS  228 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH-HHHH-HHHHTCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH-HHHH-HHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            89999999999999999999999999999999999999999876532 2222 233447999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.++++||++|.+|||+.+
T Consensus       229 ~~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          229 PEAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             CccCCccCcEEEECCCeec
Confidence            9999999999999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=7.6e-51  Score=344.93  Aligned_cols=251  Identities=22%  Similarity=0.317  Sum_probs=221.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ ..++.++.+|++ +.++++++++++
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~-~~~~v~~~~~~~   81 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP-GARLFASVCDVL-DALQVRAFAEAC   81 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCC-CHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999888876433 235888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+++.
T Consensus        82 ~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  157 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQG-RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQ--PEPHMV  157 (265)
T ss_dssp             HHHHCSCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTS--CCTTBH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCC--CCCCch
Confidence            99999999999999986 456788999999999999999999999999999998654 78999999998877  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--------hhhhhhhhh--cCCCCCCCCCChHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--------KDWLNNVAS--RTYPLRDFGTTDPALT  244 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--------~~~~~~~~~--~~~p~~~~~~~~~~va  244 (280)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++......        .+.......  ...|++|+++|+ |+|
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA  236 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPI-EAA  236 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHH-HHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHH-HHH
Confidence            999999999999999999999999999999999999998654321        111122222  227999999999 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.||+|+.++++||++|.+|||++..
T Consensus       237 ~~v~fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          237 RAILFLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHHHHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HHHHHHhCchhcCcCCCEEEECCCCcCC
Confidence            9999999999999999999999998763

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.1e-50  Score=346.69  Aligned_cols=257  Identities=25%  Similarity=0.395  Sum_probs=227.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+......++.++.+|++ +.++++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~   85 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT-NEDETARAVDAV   85 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTT-SHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC-CHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999988775544457889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++..
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  162 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASN--THRWFG  162 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHS--CCTTCT
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcC--CCCCCh
Confidence            999999999999999855566788899999999999999999999999999998754 78999999998876  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++..................|++++++|+ |+|+++.||+++.
T Consensus       163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~~~~l~s~~  241 (281)
T 3svt_A          163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE-DVANMAMFLLSDA  241 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999999765432222223333447999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccCCCCCC
Q 023555          255 SEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      ++++||++|.+|||+.+...+.
T Consensus       242 ~~~itG~~~~vdgG~~~~~~~~  263 (281)
T 3svt_A          242 ASFVTGQVINVDGGQMLRRGPD  263 (281)
T ss_dssp             GTTCCSCEEEESTTGGGSCCCC
T ss_pred             cCCCCCCEEEeCCChhcccCCc
Confidence            9999999999999999985544

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5.7e-51  Score=346.67  Aligned_cols=250  Identities=27%  Similarity=0.447  Sum_probs=224.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..   .++.++.+|++ +.+++++++++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~-d~~~v~~~~~~   96 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG---HDAEAVAFDVT-SESEIIEAFAR   96 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT-CHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCC-CHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999988886643   36888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++.
T Consensus        97 ~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~--~~~~~  172 (271)
T 4ibo_A           97 LDEQGIDVDILVNNAGIQ-FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSEL--ARATV  172 (271)
T ss_dssp             HHHHTCCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--BCTTC
T ss_pred             HHHHCCCCCEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCC--CCCCc
Confidence            999999999999999986 446777899999999999999999999999999998755 68999999998876  66788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+...+......|++|+++|+ |+|+++.||+++
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~v~~L~s~  251 (271)
T 4ibo_A          173 APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQ-ELVGTAVFLSAS  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999765433233333444458999999999 999999999999


Q ss_pred             CCCcccccEEEeCCcccCC
Q 023555          254 SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~  272 (280)
                      .++++||++|.+|||+.+.
T Consensus       252 ~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          252 ASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             GGTTCCSCEEEESTTGGGB
T ss_pred             cccCCCCcEEEECCCeecc
Confidence            9999999999999998764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1e-50  Score=342.64  Aligned_cols=254  Identities=31%  Similarity=0.499  Sum_probs=221.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~~~   77 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF---PGQILTVQMDVR-NTDDIQKMIEQI   77 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS---TTCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999888887543   347888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..+..  +.+++.
T Consensus        78 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  154 (257)
T 3imf_A           78 DEKFGRIDILINNAAGN-FICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD--AGPGVI  154 (257)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS--CCTTCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc--CCCCcH
Confidence            99999999999999976 446778899999999999999999999999999996655579999999998876  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhC-CCCeEEEEeecCcccCccccCcc-chhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          175 AYASSKAGLNAMTKCLSLELG-VHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~-~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|++..... ..+...+......|++|+.+|+ |+|+++.||++
T Consensus       155 ~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s  233 (257)
T 3imf_A          155 HSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPE-EIAGLAYYLCS  233 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            999999999999999999997 77999999999999999754321 1112222333458999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCCCCCC
Q 023555          253 DSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      +.++++||++|.+|||+++...||
T Consensus       234 ~~~~~itG~~i~vdGG~~~~~~~~  257 (257)
T 3imf_A          234 DEAAYINGTCMTMDGGQHLHQYPF  257 (257)
T ss_dssp             GGGTTCCSCEEEESTTTTSCCCC-
T ss_pred             chhcCccCCEEEECCCcccCCCCC
Confidence            999999999999999999987775

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.3e-50  Score=343.80  Aligned_cols=251  Identities=32%  Similarity=0.522  Sum_probs=222.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+..   .++.++.+|++ +.++++++++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~-d~~~v~~~~~  101 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG---GKALPIRCDVT-QPDQVRGMLD  101 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CCCEEEECCTT-CHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCC-CHHHHHHHHH
Confidence            5568999999999999999999999999999999999999999998888886643   36888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..+......++
T Consensus       102 ~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~  180 (276)
T 3r1i_A          102 QMTGELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQ  180 (276)
T ss_dssp             HHHHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSC
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCC
Confidence            9999999999999999986 445677889999999999999999999999999998866568999999988765332346


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++......  . ........|++|+++|+ |+|+++.||++
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--~-~~~~~~~~p~~r~~~pe-dvA~~v~fL~s  256 (276)
T 3r1i_A          181 VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD--Y-HALWEPKIPLGRMGRPE-ELTGLYLYLAS  256 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG--G-HHHHGGGSTTSSCBCGG-GSHHHHHHHHS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH--H-HHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            67899999999999999999999999999999999999999765422  2 22334457999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCC
Q 023555          253 DSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.++++||++|.+|||++.+
T Consensus       257 ~~~~~itG~~i~vdGG~~~~  276 (276)
T 3r1i_A          257 AASSYMTGSDIVIDGGYTCP  276 (276)
T ss_dssp             GGGTTCCSCEEEESTTTTCC
T ss_pred             ccccCccCcEEEECcCccCC
Confidence            99999999999999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.5e-50  Score=339.55  Aligned_cols=250  Identities=28%  Similarity=0.434  Sum_probs=222.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~~~~   77 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL---GVKVLVVKANVG-QPAKIKEMFQQID   77 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---TCCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHHH
Confidence            468999999999999999999999999999886 89998888888888653   347889999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+++..
T Consensus        78 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~  153 (258)
T 3oid_A           78 ETFGRLDVFVNNAASG-VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIR--YLENYTT  153 (258)
T ss_dssp             HHHSCCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTS--BCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCC--CCCCcHH
Confidence            9999999999999975 456778899999999999999999999999999998754 78999999998876  6688899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.......+...+......|++|+++|+ |+|+++.||+++.+
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~v~~L~s~~~  232 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK-DMVDTVEFLVSSKA  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHH-HHHHHHHHHTSSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999876654433333344458999999999 99999999999999


Q ss_pred             CcccccEEEeCCcccCCCCC
Q 023555          256 EYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +++||++|.+|||+++...+
T Consensus       233 ~~itG~~i~vdGG~~~~~~~  252 (258)
T 3oid_A          233 DMIRGQTIIVDGGRSLLVLE  252 (258)
T ss_dssp             TTCCSCEEEESTTGGGBCC-
T ss_pred             CCccCCEEEECCCccCCCCC
Confidence            99999999999999886544

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=4.6e-50  Score=343.77  Aligned_cols=250  Identities=28%  Similarity=0.453  Sum_probs=216.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC----------------hhHHHHHHHHHHhhcCCCcceEEEEe
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----------------VDRLKSLCDEINKQSGSSVRAMAVEL   78 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++...   +.++.++.+
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   83 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH---NRRIVTAEV   83 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT---TCCEEEEEC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc---CCceEEEEc
Confidence            37899999999999999999999999999999999887                66777777776543   347889999


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEE
Q 023555           79 DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVIN  158 (280)
Q Consensus        79 D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~  158 (280)
                      |++ +.++++++++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||+
T Consensus        84 Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~  162 (286)
T 3uve_A           84 DVR-DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL  162 (286)
T ss_dssp             CTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred             CCC-CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            999 7899999999999999999999999998754445778899999999999999999999999999987655789999


Q ss_pred             EeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------------hhhhhh-
Q 023555          159 ISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------------KDWLNN-  225 (280)
Q Consensus       159 vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------------~~~~~~-  225 (280)
                      +||..+..  +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......            ...... 
T Consensus       163 isS~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T 3uve_A          163 TSSVGGLK--AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPI  240 (286)
T ss_dssp             ECCGGGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             ECchhhcc--CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHH
Confidence            99999877  668889999999999999999999999999999999999999998753211            000111 


Q ss_pred             -hhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          226 -VASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       226 -~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       ......| +++++|+ |+|+++.||+|+.++|+|||+|.||||++++
T Consensus       241 ~~~~~~~p-~r~~~p~-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          241 CQMFHTLP-IPWVEPI-DISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             HHTTCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhhhccC-CCcCCHH-HHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence             1223467 8899999 9999999999999999999999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2e-50  Score=338.95  Aligned_cols=245  Identities=27%  Similarity=0.435  Sum_probs=218.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++      +.++.++.+|++ +.++++++++++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~v~~~~~~~   74 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI------GKKARAIAADIS-DPGSVKALFAEI   74 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEECCCCTT-CHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEcCCC-CHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999888887776      236888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++..|+||++||..+..  +.+++.
T Consensus        75 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  151 (247)
T 3rwb_A           75 QALTGGIDILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA--GTPNMA  151 (247)
T ss_dssp             HHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--TCTTCH
T ss_pred             HHHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc--CCCCch
Confidence            99999999999999986 456778899999999999999999999999999998865568999999998877  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++....... ..........|++++++|+ |+|+++.||+++.
T Consensus       152 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~r~~~pe-dva~~v~~L~s~~  229 (247)
T 3rwb_A          152 AYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVEMLQAMKGKGQPE-HIADVVSFLASDD  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHHHHSSSCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHhcccccCCCcCHH-HHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999987654322 2222223336899999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ++++||++|.+|||+..
T Consensus       230 ~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          230 ARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             ccCCCCCEEEECCCccC
Confidence            99999999999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3.1e-50  Score=345.62  Aligned_cols=254  Identities=26%  Similarity=0.450  Sum_probs=226.0

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..++++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..  ..++.++.+|++ +.+++++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~-d~~~v~~~~  110 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGVRLDVS-DPGSCADAA  110 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--SSCEEEEECCTT-CHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--CCcEEEEEEeCC-CHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999888886543  137888999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc-cCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT-SRGQL  170 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~-~~~~~  170 (280)
                      +++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+. .  +.
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~--~~  186 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVT--GY  186 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTB--BC
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccC--CC
Confidence            99999999999999999986 446788999999999999999999999999999998755 6899999998875 4  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|++.|+++++.|++++||+||+|+||+++|++..... .+.. .......|++++++|+ |+|+++.||
T Consensus       187 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~-~~~~~~~p~~r~~~p~-dvA~~v~fL  263 (293)
T 3rih_A          187 PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG-EEYI-SGMARSIPMGMLGSPV-DIGHLAAFL  263 (293)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC-HHHH-HHHHTTSTTSSCBCHH-HHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc-HHHH-HHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            788999999999999999999999999999999999999999875433 2222 2334458999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +++.++++||++|.+|||+.++.-|
T Consensus       264 ~s~~a~~itG~~i~vdGG~~~~~~~  288 (293)
T 3rih_A          264 ATDEAGYITGQAIVVDGGQVLPESP  288 (293)
T ss_dssp             HSGGGTTCCSCEEEESTTTTCBSSG
T ss_pred             hCccccCCCCCEEEECCCccCCCCC
Confidence            9999999999999999999987655

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=9.1e-50  Score=343.97  Aligned_cols=249  Identities=25%  Similarity=0.443  Sum_probs=217.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC------------hhHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKQSGSSVRAMAVELDVSAN   83 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.   +.++.++.+|++ +
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~  100 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL---GRRIIASQVDVR-D  100 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTT-C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc---CCceEEEECCCC-C
Confidence            7899999999999999999999999999999999987            67777777777653   347889999999 7


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      .++++++++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|.++++.|+||++||..
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            89999999999999999999999999875544588899999999999999999999999999998765578999999998


Q ss_pred             cccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh------------hh--hhhhhc
Q 023555          164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD------------WL--NNVASR  229 (280)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~------------~~--~~~~~~  229 (280)
                      +..  +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++........            ..  ......
T Consensus       181 ~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (299)
T 3t7c_A          181 GLR--GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH  258 (299)
T ss_dssp             GTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS
T ss_pred             hcc--CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc
Confidence            876  66888999999999999999999999999999999999999999875421100            00  011223


Q ss_pred             CCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          230 TYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       230 ~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ..| +++.+|+ |+|+++.||+++.++++||++|.||||+++.
T Consensus       259 ~~p-~r~~~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          259 VLP-IPYVEPA-DISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             SSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccC-cCCCCHH-HHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            356 8889998 9999999999999999999999999999863

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.9e-50  Score=343.00  Aligned_cols=256  Identities=31%  Similarity=0.462  Sum_probs=223.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.   +.++.++.+|++ +.+++++++++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~~   78 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG---GGEAAALAGDVG-DEALHEALVEL   78 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT---TCCEEECCCCTT-CHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999888888542   347888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.+|++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+.. .+.++.
T Consensus        79 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-~~~~~~  156 (280)
T 3tox_A           79 AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHT-AGFAGV  156 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTT-BCCTTC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCc-CCCCCc
Confidence            9999999999999999875556788899999999999999999999999999998754 78999999988762 156788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--chhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.....  ..+..........|++++++|+ |+|+++.||+
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~  235 (280)
T 3tox_A          157 APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPE-EIAEAALYLA  235 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHH-HHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHH-HHHHHHHHHh
Confidence            899999999999999999999999999999999999999865422  1122333444558999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCCCCCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      ++.++++||++|.+|||+++.-.+.
T Consensus       236 s~~a~~itG~~i~vdGG~~~~~~a~  260 (280)
T 3tox_A          236 SDGASFVTGAALLADGGASVTKAAE  260 (280)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCC---
T ss_pred             CccccCCcCcEEEECCCcccccccc
Confidence            9999999999999999999876543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6e-50  Score=339.23  Aligned_cols=247  Identities=26%  Similarity=0.405  Sum_probs=221.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .|++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~~~~   83 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT---GRRALSVGTDIT-DDAQVAHLVDETM   83 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999998888764   347889999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.++  +|+||++||..+..  +.+++..
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~  159 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSMVVRH--SQAKYGA  159 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCGGGGC--CCTTCHH
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcchhcc--CCCccHH
Confidence            9999999999999986566778899999999999999999999999999999875  48999999998876  6688899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++......         .+...+......|++|+.+|+ |+|++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~  238 (264)
T 3ucx_A          160 YKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED-EVASA  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHH-HHHHH
Confidence            99999999999999999999999999999999999998754321         122223344558999999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++.++++||++|.+|||+.+
T Consensus       239 v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          239 ILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHcCccccCCCCCEEEECCCccC
Confidence            9999999999999999999999875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.8e-50  Score=344.24  Aligned_cols=259  Identities=20%  Similarity=0.254  Sum_probs=224.2

Q ss_pred             CCCcccCCCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555            9 LDLEPWCQLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus         9 ~~~~~~~~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      ..+.+++++++|++|||||+|  |||+++|++|+++|++|++++|+++..+.+.+...+ .+   .+.++.+|++ +.++
T Consensus        20 ~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~Dv~-d~~~   94 (296)
T 3k31_A           20 GSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-LG---VKLTVPCDVS-DAES   94 (296)
T ss_dssp             -CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-HT---CCEEEECCTT-CHHH
T ss_pred             ccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-cC---CeEEEEcCCC-CHHH
Confidence            345567789999999999997  999999999999999999999997655544443332 22   3578999999 7899


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      ++++++++.+.+|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..
T Consensus        95 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~  171 (296)
T 3k31_A           95 VDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYG  171 (296)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehh
Confidence            999999999999999999999998632   256778999999999999999999999999999865   68999999998


Q ss_pred             cccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHH
Q 023555          164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      +..  +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++..................|++|+++|+ |+
T Consensus       172 ~~~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dv  248 (296)
T 3k31_A          172 AEK--VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD-DV  248 (296)
T ss_dssp             GTS--CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHH-HH
T ss_pred             hcc--CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHH-HH
Confidence            876  668889999999999999999999999999999999999999999876544333334444458999999999 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcccCCCCCCCC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPIFS  278 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~~~  278 (280)
                      |+++.||+++.++++||++|.+|||+++.+++.++
T Consensus       249 A~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~~~~  283 (296)
T 3k31_A          249 GGAALYLLSDLGRGTTGETVHVDCGYHVVGMKSVD  283 (296)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGCSSCCC-
T ss_pred             HHHHHHHcCCccCCccCCEEEECCCccccCCccCC
Confidence            99999999999999999999999999999998773

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1e-49  Score=336.95  Aligned_cols=248  Identities=25%  Similarity=0.448  Sum_probs=218.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++ +.+++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~-~~~~v~~~~~~   75 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG------PAAYAVQMDVT-RQDSIDAAIAA   75 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTT-CHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CCceEEEeeCC-CHHHHHHHHHH
Confidence            347899999999999999999999999999999999999998888877762      25788999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.+|+||++||..+..  +.++.
T Consensus        76 ~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  152 (259)
T 4e6p_A           76 TVEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR--GEALV  152 (259)
T ss_dssp             HHHHSSSCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTB
T ss_pred             HHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc--CCCCC
Confidence            999999999999999986 445777889999999999999999999999999998765578999999998876  66788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhhcCCCCCCCCCChHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.....         .............|++|+++|+ |+|
T Consensus       153 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva  231 (259)
T 4e6p_A          153 AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAE-DLT  231 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTH-HHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHH-HHH
Confidence            999999999999999999999999999999999999999865431         0111222233447999999999 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.||+++.++++||++|.+|||+.++
T Consensus       232 ~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          232 GMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            9999999999999999999999998763

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=4.3e-50  Score=340.35  Aligned_cols=245  Identities=25%  Similarity=0.460  Sum_probs=210.1

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +++++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++      +.++.++.+|++ +.++++++++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~-d~~~v~~~~~   93 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------GKDVFVFSANLS-DRKSIKQLAE   93 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CSSEEEEECCTT-SHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEeecC-CHHHHHHHHH
Confidence            567899999999999999999999999999999999999998888876655      236888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++
T Consensus        94 ~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~--~~~~  169 (266)
T 3grp_A           94 VAEREMEGIDILVNNAGIT-RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVV--GNPG  169 (266)
T ss_dssp             HHHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC---------C
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcC--CCCC
Confidence            9999999999999999986 445777889999999999999999999999999998754 78999999998876  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++...... .. .+......|++|++.|+ |+|+++.||++
T Consensus       170 ~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-~~-~~~~~~~~p~~r~~~~e-dvA~~v~~L~s  246 (266)
T 3grp_A          170 QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNE-KQ-KEAIMAMIPMKRMGIGE-EIAFATVYLAS  246 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCH-HH-HHHHHTTCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCH-HH-HHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999765432 22 23334458999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.++++||++|.+|||+.+
T Consensus       247 ~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          247 DEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             GGGTTCCSCEEEESTTC--
T ss_pred             ccccCccCCEEEECCCeee
Confidence            9999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=4.7e-50  Score=342.17  Aligned_cols=255  Identities=26%  Similarity=0.385  Sum_probs=222.5

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+..+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.+++++++
T Consensus        20 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~-~~~~v~~~~   96 (277)
T 4fc7_A           20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG--RRCLPLSMDVR-APPAVMAAV   96 (277)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTT-CHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEcCCC-CHHHHHHHH
Confidence            345579999999999999999999999999999999999999998888888865443  36889999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  +.+
T Consensus        97 ~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~  172 (277)
T 4fc7_A           97 DQALKEFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNR--GQA  172 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHH--TCT
T ss_pred             HHHHHHcCCCCEEEECCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC--CCC
Confidence            99999999999999999975 446777899999999999999999999999999997654 68999999998877  667


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +...|++||+|+++|+++++.|++++||+||+|+||+++|++.... ..............|++|+++|+ |+|+++.||
T Consensus       173 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~fL  251 (277)
T 4fc7_A          173 LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKT-EIAHSVLYL  251 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHH-HHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHH-HHHHHHHHH
Confidence            8899999999999999999999999999999999999999864221 11122222333458999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      +++.++++||++|.+|||+.+...
T Consensus       252 ~s~~~~~itG~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          252 ASPLASYVTGAVLVADGGAWLTFP  275 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTHHHHCC
T ss_pred             cCCccCCcCCCEEEECCCcccCCC
Confidence            999999999999999999987643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=7.9e-50  Score=339.44  Aligned_cols=247  Identities=29%  Similarity=0.571  Sum_probs=221.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+..   .++.++.+|++ +.++++++++++
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~-d~~~v~~~~~~~   99 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG---LEGRGAVLNVN-DATAVDALVEST   99 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT---CCCEEEECCTT-CHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEEeCC-CHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999998888887643   36778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  +.+++.
T Consensus       100 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  175 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSA--GNPGQV  175 (270)
T ss_dssp             HHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTTBH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC--CCCCch
Confidence            99999999999999986 345777899999999999999999999999999998755 79999999998877  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++...... .. ........|++++.+|+ |+|+++.||+++.
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~-~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~  252 (270)
T 3ftp_A          176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQ-EQ-QTALKTQIPLGRLGSPE-DIAHAVAFLASPQ  252 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCH-HH-HHHHHTTCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCH-HH-HHHHHhcCCCCCCCCHH-HHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999998765432 22 23334458999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccCC
Q 023555          255 SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~  272 (280)
                      +.++||++|.+|||+.++
T Consensus       253 ~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          253 AGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             GTTCCSCEEEESTTSSCC
T ss_pred             cCCccCcEEEECCCcccC
Confidence            999999999999998763

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-49  Score=338.03  Aligned_cols=250  Identities=28%  Similarity=0.459  Sum_probs=219.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++      +.++.++.+|++ +.++++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~v~~~~~~~   79 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------GRGAVHHVVDLT-NEVSVRALIDFT   79 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH------CTTCEEEECCTT-CHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCCeEEEECCCC-CHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999888887776      236778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      .+.+|++|++|||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++.
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~  156 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHA--AYDMS  156 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--BCSSC
T ss_pred             HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcC--CCCCC
Confidence            9999999999999998633 45567889999999999999999999999999998754 78999999998876  66788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+.... .....|++|+++|+ |+|+++.||+++
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~r~~~p~-dvA~~v~~L~s~  234 (271)
T 3tzq_B          157 TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDI-FATHHLAGRIGEPH-EIAELVCFLASD  234 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHH-HHTTSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999998764333333333 34457999999999 999999999999


Q ss_pred             CCCcccccEEEeCCcccCCCCCCC
Q 023555          254 SSEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      .++++||++|.+||| .+...|.+
T Consensus       235 ~~~~itG~~i~vdGG-~~~~~~~~  257 (271)
T 3tzq_B          235 RAAFITGQVIAADSG-LLAHLPGL  257 (271)
T ss_dssp             GGTTCCSCEEEESTT-TTTBCTTH
T ss_pred             ccCCcCCCEEEECCC-ccccCCCc
Confidence            999999999999999 66665543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.5e-49  Score=339.02  Aligned_cols=251  Identities=31%  Similarity=0.514  Sum_probs=219.3

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++      +.++.++.+|++ +.+++++++
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~-d~~~v~~~~   92 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI------GSKAFGVRVDVS-SAKDAESMV   92 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CTTEEEEECCTT-CHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEecCC-CHHHHHHHH
Confidence            3556899999999999999999999999999999999999998888877764      236888999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~  168 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATS--AIA  168 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTS--CCT
T ss_pred             HHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCc--CCC
Confidence            99999999999999999986 446778899999999999999999999999999998654 78999999998876  668


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----chhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      +...|++||+|+++|+++++.|++++||+||+|+||+++|++.....    .............|++++++|+ |+|+++
T Consensus       169 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~~v  247 (277)
T 4dqx_A          169 DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAE-EIAEAM  247 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHH-HHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHH-HHHHHH
Confidence            88999999999999999999999999999999999999999843221    1111112244558999999999 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      .||+++.++++||++|.+|||+.+...
T Consensus       248 ~~L~s~~~~~itG~~i~vdGG~~~~~~  274 (277)
T 4dqx_A          248 LFLASDRSRFATGSILTVDGGSSIGNH  274 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSSSCCT
T ss_pred             HHHhCCccCCCcCCEEEECCchhhhhc
Confidence            999999999999999999999988654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.3e-49  Score=339.77  Aligned_cols=251  Identities=27%  Similarity=0.423  Sum_probs=216.3

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++...+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.+++++++
T Consensus        17 ~~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-d~~~v~~~~   92 (279)
T 3sju_A           17 RGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA---GHDVDGSSCDVT-STDEVHAAV   92 (279)
T ss_dssp             --------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TCCEEEEECCTT-CHHHHHHHH
T ss_pred             CcccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHHHHH
Confidence            3444578999999999999999999999999999999999999999988888654   347889999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH--HHHhcCCCCeEEEEeccccccCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCI--RMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +++.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|  .|++++ .|+||++||..+..  +
T Consensus        93 ~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~--~  168 (279)
T 3sju_A           93 AAAVERFGPIGILVNSAGRN-GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQ--G  168 (279)
T ss_dssp             HHHHHHHCSCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTS--C
T ss_pred             HHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhcc--C
Confidence            99999999999999999986 446777899999999999999999999999999  576644 68999999998876  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhhcCCCCCCCCCCh
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRTYPLRDFGTTD  240 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~p~~~~~~~~  240 (280)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....         ..+...+......|++|+++|+
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  248 (279)
T 3sju_A          169 VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE  248 (279)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHH
Confidence            6788999999999999999999999999999999999999999865421         1222333444558999999999


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                       |+|+++.||+++.++++||++|.+|||++.
T Consensus       249 -dvA~~v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          249 -EVAGLVGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             -HHHHHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             -HHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence             999999999999999999999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.3e-49  Score=338.02  Aligned_cols=245  Identities=30%  Similarity=0.544  Sum_probs=217.4

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      .+++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+.   +.++.++.+|++ +.++++++++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-d~~~v~~~~~   98 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA---GGEAFAVKADVS-QESEVEALFA   98 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT-SHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHHHHHH
Confidence            35789999999999999999999999999999999998 666777777777653   337888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++
T Consensus        99 ~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  174 (269)
T 4dmm_A           99 AVIERWGRLDVLVNNAGIT-RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEM--GNPG  174 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHH--CCTT
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC--CCCC
Confidence            9999999999999999986 445677889999999999999999999999999998754 78999999998876  6678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++......     +......|+++++.|+ |+|+++.||++
T Consensus       175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-----~~~~~~~p~~r~~~~~-dvA~~v~~l~s  248 (269)
T 4dmm_A          175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-----EKLLEVIPLGRYGEAA-EVAGVVRFLAA  248 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-----HHHGGGCTTSSCBCHH-HHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-----HHHHhcCCCCCCCCHH-HHHHHHHHHhC
Confidence            89999999999999999999999999999999999999998754321     2233447999999999 99999999999


Q ss_pred             C-CCCcccccEEEeCCcccCC
Q 023555          253 D-SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~-~~~~i~G~~i~vdgG~~~~  272 (280)
                      + .+.++||++|.+|||+.++
T Consensus       249 ~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          249 DPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             CGGGGGCCSCEEEESTTSCCC
T ss_pred             CcccCCCcCCEEEECCCeecC
Confidence            7 7899999999999999764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-49  Score=336.87  Aligned_cols=247  Identities=30%  Similarity=0.445  Sum_probs=215.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-------------ChhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-------------RVDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...   +.++.++.+|++ 
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-   83 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA---NRRIVAAVVDTR-   83 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTT-
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---CCeEEEEECCCC-
Confidence            689999999999999999999999999999999998             667777777777653   347889999999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                      +.++++++++++.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||.
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  162 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA  162 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence            78999999999999999999999999986 34577789999999999999999999999999999886556899999999


Q ss_pred             ccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhcCCCC
Q 023555          163 AATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASRTYPL  233 (280)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~p~  233 (280)
                      .+..  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++......         .+..........|.
T Consensus       163 ~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  240 (277)
T 3tsc_A          163 AGMK--MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD  240 (277)
T ss_dssp             GGTS--CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC
T ss_pred             hhCC--CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC
Confidence            8876  668889999999999999999999999999999999999999998753111         11112223333565


Q ss_pred             CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          234 RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       234 ~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                       ++.+|+ |+|+++.||+++.++++||++|.+|||+++
T Consensus       241 -r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          241 -WVAEPE-DIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             -SCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCHH-HHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence             788998 999999999999999999999999999874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=3.2e-49  Score=339.53  Aligned_cols=255  Identities=23%  Similarity=0.314  Sum_probs=213.6

Q ss_pred             ccCCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ++.++++|++|||||+  +|||+++|++|+++|++|++++|+++..+. .+++.+..+   ++.++.+|++ +.++++++
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~---~~~~~~~Dv~-d~~~v~~~   99 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEELG---AFVAGHCDVA-DAASIDAV   99 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHHT---CEEEEECCTT-CHHHHHHH
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcC---CceEEECCCC-CHHHHHHH
Confidence            4567999999999999  559999999999999999999999654333 333333333   5788999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      ++++.+.+|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+.. 
T Consensus       100 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~-  175 (293)
T 3grk_A          100 FETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEK-  175 (293)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTS-
T ss_pred             HHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhcc-
Confidence            99999999999999999998642   356778999999999999999999999999999965   68999999998876 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                       +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|++|+++|+ |+|+++
T Consensus       176 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v  253 (293)
T 3grk_A          176 -VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID-EVGDVG  253 (293)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHH-HHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHH-HHHHHH
Confidence             668889999999999999999999999999999999999999999776544343344444558999999999 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccCCCCCCCC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATLPGLPIFS  278 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~~~~~~~~  278 (280)
                      .||+++.++++||++|.+|||+++.+++.+.
T Consensus       254 ~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~  284 (293)
T 3grk_A          254 LYFLSDLSRSVTGEVHHADSGYHVIGMKAVD  284 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGBCC----
T ss_pred             HHHcCccccCCcceEEEECCCcccCCCCcCC
Confidence            9999999999999999999999999987543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4e-49  Score=336.95  Aligned_cols=251  Identities=33%  Similarity=0.482  Sum_probs=215.1

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-------------ChhHHHHHHHHHHhhcCCCcceEEEEe
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-------------RVDRLKSLCDEINKQSGSSVRAMAVEL   78 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (280)
                      ..+.+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++.+.   +.++.++.+
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   84 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ---GRKALTRVL   84 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT---TCCEEEEEC
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---CCeEEEEEc
Confidence            3456899999999999999999999999999999999998             677788877777653   347889999


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEE
Q 023555           79 DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVIN  158 (280)
Q Consensus        79 D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~  158 (280)
                      |++ +.++++++++++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.+|+||+
T Consensus        85 Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~  162 (280)
T 3pgx_A           85 DVR-DDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVV  162 (280)
T ss_dssp             CTT-CHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred             CCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            999 789999999999999999999999999863 457778999999999999999999999999999987655789999


Q ss_pred             EeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh------hhhhh--hhcC
Q 023555          159 ISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD------WLNNV--ASRT  230 (280)
Q Consensus       159 vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~------~~~~~--~~~~  230 (280)
                      +||..+..  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++........      ...+.  ....
T Consensus       163 isS~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
T 3pgx_A          163 VSSSAGLK--ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPV  240 (280)
T ss_dssp             ECCGGGTS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTT
T ss_pred             Ecchhhcc--CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhccc
Confidence            99998876  66888999999999999999999999999999999999999999875321111      01111  1122


Q ss_pred             CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          231 YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       231 ~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .|. ++.+|+ |+|+++.||+++.++++||++|.+|||+..
T Consensus       241 ~~~-r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          241 QPN-GFMTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             BCS-SCBCHH-HHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCC-CCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            455 688998 999999999999999999999999999864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-49  Score=336.65  Aligned_cols=246  Identities=28%  Similarity=0.426  Sum_probs=205.4

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .+.+.+++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...   +.++.++.+|++ +.++++++
T Consensus        20 ~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~v~~~   95 (267)
T 3u5t_A           20 FQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA---GGKALTAQADVS-DPAAVRRL   95 (267)
T ss_dssp             -------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHH
T ss_pred             ccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEEcCCC-CHHHHHHH
Confidence            34456889999999999999999999999999999888 45666777777777653   237888999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +.
T Consensus        96 ~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~--~~  169 (267)
T 3u5t_A           96 FATAEEAFGGVDVLVNNAGIM-PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGL--LH  169 (267)
T ss_dssp             HHHHHHHHSCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHH--CC
T ss_pred             HHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhcc--CC
Confidence            999999999999999999986 4567788999999999999999999999999999964   58999999988876  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+. .+......|++|+++|+ |+|+++.||
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~p~~r~~~pe-dvA~~v~~L  247 (267)
T 3u5t_A          170 PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEV-RDRFAKLAPLERLGTPQ-DIAGAVAFL  247 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------C-HHHHHTSSTTCSCBCHH-HHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHH-HHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            8889999999999999999999999999999999999999998754333222 23344558999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcc
Q 023555          251 VHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~  269 (280)
                      +++.+.++||++|.+|||+
T Consensus       248 ~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          248 AGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             HSTTTTTCCSEEEEESSSC
T ss_pred             hCccccCccCCEEEeCCCc
Confidence            9999999999999999997

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-49  Score=336.05  Aligned_cols=249  Identities=27%  Similarity=0.417  Sum_probs=214.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.   +.++.++.+|++ +.++++++.+
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~~~Dv~-d~~~v~~~~~   99 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG---GGSAEAVVADLA-DLEGAANVAE   99 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT---TCEEEEEECCTT-CHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHHHHH
Confidence            4457999999999999999999999999999999999976 4556666666543   347889999999 7899999844


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                       ..+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++
T Consensus       100 -~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~--~~~~  174 (273)
T 3uf0_A          100 -ELAATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQ--GGRN  174 (273)
T ss_dssp             -HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCSS
T ss_pred             -HHHhcCCCcEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcC--CCCC
Confidence             456679999999999986 446778899999999999999999999999999998755 78999999998876  6678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|++|+++|+ |+|+++.||++
T Consensus       175 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~v~~L~s  253 (273)
T 3uf0_A          175 VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPE-DMVGPAVFLAS  253 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGG-GGHHHHHHHHS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhC
Confidence            89999999999999999999999999999999999999998765432222223333448999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCC
Q 023555          253 DSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.++++||++|.+|||+.++
T Consensus       254 ~~a~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          254 DAASYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             chhcCCcCCEEEECcCccCC
Confidence            99999999999999998753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.5e-49  Score=335.14  Aligned_cols=247  Identities=24%  Similarity=0.364  Sum_probs=217.4

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.      .++.++.+|++ +.+++++++++
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~-~~~~v~~~~~~   75 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG------PRVHALRSDIA-DLNEIAVLGAA   75 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTT-CHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCC-CHHHHHHHHHH
Confidence            457899999999999999999999999999999999999998888777762      37889999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +.+++
T Consensus        76 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~  149 (255)
T 4eso_A           76 AGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEG--GHPGM  149 (255)
T ss_dssp             HHHHHSSEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSS--BCTTB
T ss_pred             HHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcC--CCCCc
Confidence            999999999999999986 4467788999999999999999999999999999864   58999999999876  66889


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-ch---hhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KK---DWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~---~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++..... ..   ...........|++|+++|+ |+|+++.|
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~  228 (255)
T 4eso_A          150 SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTAD-EVARAVLF  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHH-HHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHH-HHHHHHHH
Confidence            999999999999999999999999999999999999999865321 11   12222333447999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      |+++ ++++||++|.+|||+.....+
T Consensus       229 L~s~-~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          229 LAFE-ATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHT-CTTCCSCEEEESTTTTTTBCC
T ss_pred             HcCc-CcCccCCEEEECCCccccCcC
Confidence            9998 899999999999999876543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-48  Score=333.58  Aligned_cols=251  Identities=28%  Similarity=0.438  Sum_probs=215.1

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC------------hhHHHHHHHHHHhhcCCCcceEEEEecc
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKQSGSSVRAMAVELDV   80 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~   80 (280)
                      +|.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.   +.++.++.+|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv   80 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT---GRRCISAKVDV   80 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT---TCCEEEEECCT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc---CCeEEEEeCCC
Confidence            5678999999999999999999999999999999999997            55666666666543   34788999999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      + +.++++++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++|
T Consensus        81 ~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is  157 (281)
T 3s55_A           81 K-DRAALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVS  157 (281)
T ss_dssp             T-CHHHHHHHHHHHHHHHTCCCEEEECCCCC-CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             C-CHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEC
Confidence            9 78999999999999999999999999986 446778899999999999999999999999999998755 68999999


Q ss_pred             ccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hh---hhhh-h-
Q 023555          161 SIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KD---WLNN-V-  226 (280)
Q Consensus       161 S~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~---~~~~-~-  226 (280)
                      |..+..  +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......         ..   .... + 
T Consensus       158 S~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (281)
T 3s55_A          158 SMLGHS--ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA  235 (281)
T ss_dssp             CGGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH
T ss_pred             ChhhcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH
Confidence            998876  667889999999999999999999999999999999999999998753110         00   0011 1 


Q ss_pred             hhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          227 ASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       227 ~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      .....| +++..|+ |+|+++.||+++.+.++||++|.+|||+.+..
T Consensus       236 ~~~~~~-~~~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~~  280 (281)
T 3s55_A          236 SLHLQY-APFLKPE-EVTRAVLFLVDEASSHITGTVLPIDAGATARM  280 (281)
T ss_dssp             HHCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             hhhccC-cCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECCCcccCC
Confidence            112234 8899999 99999999999999999999999999998753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.3e-49  Score=336.28  Aligned_cols=250  Identities=30%  Similarity=0.458  Sum_probs=211.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +++|++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+..  +.++.++.+|++ +.++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~-d~~~v~~~~~   96 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS--SGTVLHHPADMT-KPSEIADMMA   96 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC--SSCEEEECCCTT-CHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc--CCcEEEEeCCCC-CHHHHHHHHH
Confidence            56899999999999999999999999999999999999 6677787777776542  347888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++
T Consensus        97 ~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  172 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLV--ASPF  172 (281)
T ss_dssp             HHHHHTSSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTT
T ss_pred             HHHHHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCccccc--CCCC
Confidence            9999999999999999986 446777889999999999999999999999999998754 78999999998876  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh----------hhhhhhhcCCCCCCCCCChHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD----------WLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++........          ...+......|++++.+|+ |
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~e-d  251 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE-Q  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHH-H
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHH-H
Confidence            8999999999999999999999999999999999999999876432211          1122234457999999999 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +|+++.||+++.++++||++|.+|||+++
T Consensus       252 vA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          252 VASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=7.6e-49  Score=329.13  Aligned_cols=244  Identities=28%  Similarity=0.536  Sum_probs=216.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +.+|++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-d~~~v~~~~~~~~   77 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK---GVDSFAIQANVA-DADEVKAMIKEVV   77 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TSCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHHH
Confidence            57899999999999999999999999999999887 557777777777653   347888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++...
T Consensus        78 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  153 (246)
T 3osu_A           78 SQFGSLDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAV--GNPGQAN  153 (246)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC--CCCCChH
Confidence            9999999999999986 446778899999999999999999999999999998754 78999999988877  6678899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.....+ ... +......|+++++.|+ |+|+++.||+++.+
T Consensus       154 Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~~~-~~~~~~~p~~r~~~~~-dva~~v~~l~s~~~  230 (246)
T 3osu_A          154 YVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-ELK-EQMLTQIPLARFGQDT-DIANTVAFLASDKA  230 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH-HHH-HHHHTTCTTCSCBCHH-HHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH-HHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999766432 222 3334458999999999 99999999999999


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      .++||++|.+|||+.+
T Consensus       231 ~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          231 KYITGQTIHVNGGMYM  246 (246)
T ss_dssp             TTCCSCEEEESTTSCC
T ss_pred             cCCCCCEEEeCCCccC
Confidence            9999999999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-49  Score=337.34  Aligned_cols=251  Identities=27%  Similarity=0.444  Sum_probs=199.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.   +.++.++.+|++ +.+++++++++
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-d~~~v~~~~~~  100 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL---GARVIFLRADLA-DLSSHQATVDA  100 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT---TCCEEEEECCTT-SGGGHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHHHHHH
Confidence            3688999999999999999999999999999999995 777788888887653   347889999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC--CCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ--EGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.  .|+||++||..+..  +.
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~  178 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM--TS  178 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc--CC
Confidence            9999999999999999842 3457778899999999999999999999999999987432  57999999998876  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||+|++.|+++++.|++++||+||+|+||+++|++...... ...........|++|+++|+ |+|+++.||
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L  256 (280)
T 4da9_A          179 PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG-KYDGLIESGLVPMRRWGEPE-DIGNIVAGL  256 (280)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------CCBCHH-HHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch-hHHHHHhhcCCCcCCcCCHH-HHHHHHHHH
Confidence            7889999999999999999999999999999999999999999765432 12222222257999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +++.+.++||++|.+|||+++..
T Consensus       257 ~s~~~~~itG~~i~vdGG~~~~~  279 (280)
T 4da9_A          257 AGGQFGFATGSVIQADGGLSIGR  279 (280)
T ss_dssp             HTSTTGGGTTCEEEESTTCC---
T ss_pred             hCccccCCCCCEEEECCCcccCC
Confidence            99999999999999999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=4.1e-49  Score=335.16  Aligned_cols=246  Identities=25%  Similarity=0.447  Sum_probs=214.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++++ .+.+++..+++.+.   +.++.++.+|++ +.++++++++
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~   88 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL---GSDAIAIKADIR-QVPEIVKLFD   88 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT-SHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHH
Confidence            347999999999999999999999999999999998764 56677777777653   347889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc-ccCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLP  171 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~-~~~~~~~  171 (280)
                      ++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+ ..  +.+
T Consensus        89 ~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~--~~~  162 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVV-SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDF--SVP  162 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTC--CCT
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccC--CCC
Confidence            9999999999999999986 4567788999999999999999999999999999965   589999999873 33  567


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc----------cchhhhhhhhhcCCCCCCCCCChH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL----------MKKDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~----------~~~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      +...|++||+|++.|+++++.|++++||+||+|+||+++|++....          ...+..........|++|++.|+ 
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-  241 (270)
T 3is3_A          163 KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ-  241 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHH-
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHH-
Confidence            8899999999999999999999999999999999999999986531          11222333344457999999999 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      |+|+++.||+++.++++||++|.+|||+.
T Consensus       242 dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          242 DVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            99999999999999999999999999973

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.8e-49  Score=339.62  Aligned_cols=250  Identities=24%  Similarity=0.349  Sum_probs=217.9

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHH-HHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+.+.. +...+.+.+   .+.++.++.+|++ +.+++++++
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~-d~~~v~~~~  116 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK---EGVKCVLLPGDLS-DEQHCKDIV  116 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT---TTCCEEEEESCTT-SHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh---cCCcEEEEECCCC-CHHHHHHHH
Confidence            44578999999999999999999999999999999999987654 444444433   2347889999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +.+
T Consensus       117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~  191 (291)
T 3ijr_A          117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYE--GNE  191 (291)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHH--CCT
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcC--CCC
Confidence            9999999999999999998755567778899999999999999999999999999854   57999999998877  667


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||+|++.|+++++.|++++||+||+|+||+++|++............ .....|++++++|+ |+|+++.||+
T Consensus       192 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~p~~r~~~p~-dvA~~v~~L~  269 (291)
T 3ijr_A          192 TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ-FGSNVPMQRPGQPY-ELAPAYVYLA  269 (291)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH-TTTTSTTSSCBCGG-GTHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH-HHccCCCCCCcCHH-HHHHHHHHHh
Confidence            889999999999999999999999999999999999999998754433333333 33458999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ++.+.++||++|.+|||+.+.|
T Consensus       270 s~~~~~itG~~i~vdGG~~~~g  291 (291)
T 3ijr_A          270 SSDSSYVTGQMIHVNGGVIVNG  291 (291)
T ss_dssp             SGGGTTCCSCEEEESSSCCCCC
T ss_pred             CCccCCCcCCEEEECCCcccCC
Confidence            9999999999999999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.7e-49  Score=338.50  Aligned_cols=247  Identities=30%  Similarity=0.476  Sum_probs=214.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++      +.++.++.+|++ +.+++++++++
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~-d~~~v~~~~~~   96 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI------GCGAAACRVDVS-DEQQIIAMVDA   96 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CSSCEEEECCTT-CHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCcceEEEecCC-CHHHHHHHHHH
Confidence            34789999999999999999999999999999999999999888877766      236788999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++.
T Consensus        97 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~--~~~~~  172 (277)
T 3gvc_A           97 CVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQV--AVGGT  172 (277)
T ss_dssp             HHHHHSSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCTTB
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc--CCCCc
Confidence            999999999999999986 446778899999999999999999999999999998754 79999999998876  66888


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhhhhhhhhc---CCCCCCCCCChHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASR---TYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~~~~~~~~---~~p~~~~~~~~~~va~~~~  248 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++......  ..........   ..|++|+++|+ |+|+++.
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~~v~  251 (277)
T 3gvc_A          173 GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPE-EMAGIVV  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHH-HHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHH-HHHHHHH
Confidence            9999999999999999999999999999999999999998653221  1011111111   25788999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ||+++.++++|||+|.+|||+...
T Consensus       252 ~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          252 FLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHcCCccCCccCcEEEECCcchhc
Confidence            999999999999999999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=4.6e-49  Score=333.12  Aligned_cols=252  Identities=27%  Similarity=0.425  Sum_probs=207.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.      .++.++.+|++ +.+++++++++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~-~~~~~~~~~~~   76 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG------DAALAVAADIS-KEADVDAAVEA   76 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTT-SHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CceEEEEecCC-CHHHHHHHHHH
Confidence            458999999999999999999999999999999999999999888877662      36888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN---QEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++   ..++||++||..+..  +.
T Consensus        77 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~  154 (261)
T 3n74_A           77 ALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR--PR  154 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS--CC
T ss_pred             HHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC--CC
Confidence            9999999999999999875456777789999999999999999999999999998742   257899999998876  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +++..|++||+|++.|+++++.|++++||+||+|+||+++|++......  .+...+......|++++.+|+ |+|+++.
T Consensus       155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  233 (261)
T 3n74_A          155 PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPD-DLAEAAA  233 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHH-HHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHH-HHHHHHH
Confidence            7888999999999999999999999999999999999999999765432  122233344557999999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      ||+++.++++||++|.+|||+.+.+.+
T Consensus       234 ~l~s~~~~~itG~~i~vdgG~~~~~~~  260 (261)
T 3n74_A          234 FLCSPQASMITGVALDVDGGRSIGGRS  260 (261)
T ss_dssp             HHTSGGGTTCCSCEEEESTTTTC----
T ss_pred             HHcCCcccCcCCcEEEecCCcccCCCc
Confidence            999999999999999999999998865

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.5e-49  Score=337.24  Aligned_cols=247  Identities=18%  Similarity=0.254  Sum_probs=217.2

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~~~~~~~  102 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS---GGTAQELAGDLS-EAGAGTDLIE  102 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT---TCCEEEEECCTT-STTHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEecCC-CHHHHHHHHH
Confidence            445899999999999999999999999999999999999999988888888663   347889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+. +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+.
T Consensus       103 ~~~~~-g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~--~~~~  177 (275)
T 4imr_A          103 RAEAI-APVDILVINASAQ-INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLR--PKSV  177 (275)
T ss_dssp             HHHHH-SCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTT
T ss_pred             HHHHh-CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC--CCCC
Confidence            99887 9999999999986 345777899999999999999999999999999998754 78999999998876  5566


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++......  .+..........|++|+++|+ |+|+++.||
T Consensus       178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~fL  256 (275)
T 4imr_A          178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPE-EMVGAALFL  256 (275)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGG-GGHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHH-HHHHHHHHH
Confidence            67799999999999999999999999999999999999998754321  223333343434999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcc
Q 023555          251 VHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~  269 (280)
                      +++.++++||++|.+|||+
T Consensus       257 ~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          257 ASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HSGGGTTCCSCEEEESSCC
T ss_pred             cCcccCCCCCCEEEeCCCC
Confidence            9999999999999999996

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.6e-49  Score=336.20  Aligned_cols=251  Identities=21%  Similarity=0.304  Sum_probs=207.6

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC---hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR---VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      ..++++++|++|||||++|||+++|++|+++|++|++++|+   .+.++++.+++.+.   +.++.++.+|++ +.++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-d~~~v~   79 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ---GAKVALYQSDLS-NEEEVA   79 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT---TCEEEEEECCCC-SHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHH
Confidence            45678999999999999999999999999999999998765   45667777777553   347889999999 789999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  
T Consensus        80 ~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~--  153 (262)
T 3ksu_A           80 KLFDFAEKEFGKVDIAINTVGKV-LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLAA--  153 (262)
T ss_dssp             HHHHHHHHHHCSEEEEEECCCCC-CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHHH--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhcc--
Confidence            99999999999999999999986 3467778999999999999999999999999999943   58999999988776  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++......... ........|++++.+|+ |+|+++.
T Consensus       154 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~r~~~pe-dvA~~v~  231 (262)
T 3ksu_A          154 YTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES-TAFHKSQAMGNQLTKIE-DIAPIIK  231 (262)
T ss_dssp             HHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGG-GTHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH-HHHHHhcCcccCCCCHH-HHHHHHH
Confidence            557888999999999999999999999999999999999999998765433332 22333447899999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      ||+++ +.++||++|.+|||+.....+
T Consensus       232 ~L~s~-~~~itG~~i~vdGg~~~~~~~  257 (262)
T 3ksu_A          232 FLTTD-GWWINGQTIFANGGYTTREGH  257 (262)
T ss_dssp             HHHTT-TTTCCSCEEEESTTCCCC---
T ss_pred             HHcCC-CCCccCCEEEECCCccCCCcc
Confidence            99999 899999999999999876543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.6e-48  Score=329.44  Aligned_cols=255  Identities=24%  Similarity=0.392  Sum_probs=217.2

Q ss_pred             CCCCcccCCCCCcEEEEecCC-ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555            8 CLDLEPWCQLDNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus         8 ~~~~~~~~~l~~k~vlItG~~-~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      +...++++++++|++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+..  ..++.++.+|++ +.++
T Consensus        11 ~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~-~~~~   87 (266)
T 3o38_A           11 PKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVT-STEA   87 (266)
T ss_dssp             CCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTT-CHHH
T ss_pred             ccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCC-CHHH
Confidence            334456778999999999998 599999999999999999999999999999888886543  247889999999 7899


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      ++++++++.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++..++||++||..+..
T Consensus        88 v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~  166 (266)
T 3o38_A           88 VDALITQTVEKAGRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR  166 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC
T ss_pred             HHHHHHHHHHHhCCCcEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC
Confidence            9999999999999999999999986 446777889999999999999999999999999998765578999999998876


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                        +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+.... .....|++++.+|+ |+|+.
T Consensus       167 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~r~~~~~-dva~~  242 (266)
T 3o38_A          167 --AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDR-LASDEAFGRAAEPW-EVAAT  242 (266)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHH-HHHHH
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHH-HHhcCCcCCCCCHH-HHHHH
Confidence              667889999999999999999999999999999999999999999776544333333 33447899999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCccc
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +.||+++.+.++||++|.+|||++
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCCC
T ss_pred             HHHHcCccccCccCCEEEEcCCcC
Confidence            999999999999999999999974

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=6.3e-49  Score=337.91  Aligned_cols=248  Identities=24%  Similarity=0.339  Sum_probs=215.1

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+.  +.++++.+.+.+.   +.++.++.+|++ +.++++++
T Consensus        43 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-d~~~v~~~  118 (294)
T 3r3s_A           43 GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC---GRKAVLLPGDLS-DESFARSL  118 (294)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT---TCCEEECCCCTT-SHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc---CCcEEEEEecCC-CHHHHHHH
Confidence            34578999999999999999999999999999999999873  4455555555443   347888999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+..  +.
T Consensus       119 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~--~~  193 (294)
T 3r3s_A          119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQ--PS  193 (294)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTS--CC
T ss_pred             HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhcc--CC
Confidence            99999999999999999998655567788999999999999999999999999998854   58999999999877  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++.... ...+... ......|++++++|+ |+|+++.|
T Consensus       194 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~p~~r~~~p~-dvA~~v~~  271 (294)
T 3r3s_A          194 PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP-QFGQQTPMKRAGQPA-ELAPVYVY  271 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGST-TTTTTSTTSSCBCGG-GGHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHH-HHHhcCCCCCCcCHH-HHHHHHHH
Confidence            88899999999999999999999999999999999999999984322 2222222 233457999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+++.++++||++|.||||+++
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            9999999999999999999986

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=4.5e-49  Score=332.93  Aligned_cols=249  Identities=28%  Similarity=0.500  Sum_probs=204.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++++++|++|||||++|||+++|++|+++|++|+++ .++.+.+++..+++.+.   +.++.++.+|++ +.++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~   78 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL---GRSALAIKADLT-NAAEVEAAIS   78 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT---TSCCEEEECCTT-CHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCceEEEEcCCC-CHHHHHHHHH
Confidence            467999999999999999999999999999999998 56677777777777553   346888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc-cCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT-SRGQLP  171 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~-~~~~~~  171 (280)
                      ++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+. .  +.+
T Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~--~~~  153 (259)
T 3edm_A           79 AAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDG--GGP  153 (259)
T ss_dssp             HHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHC--CST
T ss_pred             HHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccC--CCC
Confidence            999999999999999998655678889999999999999999999999999999965   5899999998876 4  557


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||+|++.|+++++.|++++ |+||+|+||+++|++......++. .+......|++|+++|+ |+|+++.||+
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~p~~r~~~pe-dva~~v~~L~  230 (259)
T 3edm_A          154 GALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEV-RERVAGATSLKREGSSE-DVAGLVAFLA  230 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHH-HHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHH-HHHHHhcCCCCCCcCHH-HHHHHHHHHc
Confidence            88899999999999999999999987 999999999999999876543332 23333447999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCCCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      ++.++++||++|.+|||+...-.
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC--
T ss_pred             CccccCccCCEEEECCCcCCCCC
Confidence            99999999999999999886543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.3e-48  Score=337.78  Aligned_cols=252  Identities=32%  Similarity=0.499  Sum_probs=214.9

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC------------hhHHHHHHHHHHhhcCCCcceEEEEec
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKQSGSSVRAMAVELD   79 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (280)
                      .+|.+++||++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+++.+.   +.++.++.+|
T Consensus        39 ~~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D  115 (317)
T 3oec_A           39 ARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ---GRRIIARQAD  115 (317)
T ss_dssp             ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECC
T ss_pred             chhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc---CCeEEEEECC
Confidence            35678999999999999999999999999999999999886            66677777766553   3478899999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 023555           80 VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI  159 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~v  159 (280)
                      ++ +.++++++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++
T Consensus       116 v~-d~~~v~~~~~~~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~i  193 (317)
T 3oec_A          116 VR-DLASLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFV  193 (317)
T ss_dssp             TT-CHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred             CC-CHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            99 78999999999999999999999999986 44677889999999999999999999999999999876557899999


Q ss_pred             eccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc------------chhhhhhh-
Q 023555          160 SSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM------------KKDWLNNV-  226 (280)
Q Consensus       160 sS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~------------~~~~~~~~-  226 (280)
                      ||..+..  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.....            ......+. 
T Consensus       194 sS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (317)
T 3oec_A          194 SSTVGLR--GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELF  271 (317)
T ss_dssp             CCGGGSS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHH
T ss_pred             CcHHhcC--CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHH
Confidence            9998876  66888999999999999999999999999999999999999999864211            00011111 


Q ss_pred             -hhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          227 -ASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       227 -~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       .....| +++..|+ |+|+++.||+++.++++||++|.||||+.+.
T Consensus       272 ~~~~~~p-~~~~~pe-dvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          272 SQLTLLP-IPWVEPE-DVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             TTTCSSS-SSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhhccCC-CCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence             112244 7888998 9999999999999999999999999999764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-48  Score=329.16  Aligned_cols=250  Identities=30%  Similarity=0.481  Sum_probs=214.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.+++++++++
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~   91 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---GLNVEGSVCDLL-SRTERDKLMQT   91 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCC-CHHHHHHHHHH
Confidence            34789999999999999999999999999999999999998888888877653   236788999999 78999999999


Q ss_pred             HHHHc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.+.+ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++
T Consensus        92 ~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~  167 (273)
T 1ae1_A           92 VAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFS--ALPS  167 (273)
T ss_dssp             HHHHTTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTS--CCTT
T ss_pred             HHHHcCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcC--CCCC
Confidence            99999 9999999999986 345777889999999999999999999999999998754 68999999998876  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-----hhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++......     ........ ...|++++++|+ |+|+++
T Consensus       168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~p~~r~~~p~-dvA~~v  245 (273)
T 1ae1_A          168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI-VKTPMGRAGKPQ-EVSALI  245 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH-HHSTTCSCBCHH-HHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHH-hcCCCCCCcCHH-HHHHHH
Confidence            89999999999999999999999999999999999999998654322     12222222 337899999999 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccCCC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      .||+++.++++||++|.+|||+++.+
T Consensus       246 ~~l~s~~~~~~tG~~i~vdGG~~~~~  271 (273)
T 1ae1_A          246 AFLCFPAASYITGQIIWADGGFTANG  271 (273)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHhCccccCcCCCEEEECCCcccCC
Confidence            99999999999999999999998765

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.9e-48  Score=331.26  Aligned_cols=249  Identities=26%  Similarity=0.438  Sum_probs=210.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC------------hhHHHHHHHHHHhhcCCCcceEEEEecc
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKQSGSSVRAMAVELDV   80 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~   80 (280)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+..   .++.++.+|+
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~   83 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADV   83 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCT
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCC
Confidence            4568999999999999999999999999999999999987            667777777765542   3788999999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      + +.++++++++++.+.+|++|+||||||+....     .+.++|++.+++|+.+++.++++++|+|.+++..|+||++|
T Consensus        84 ~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  157 (278)
T 3sx2_A           84 R-DRESLSAALQAGLDELGRLDIVVANAGIAPMS-----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS  157 (278)
T ss_dssp             T-CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCS-----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             C-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence            9 78999999999999999999999999986321     25899999999999999999999999998865578999999


Q ss_pred             ccccccCC--CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhh---------hhhc
Q 023555          161 SIAATSRG--QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN---------VASR  229 (280)
Q Consensus       161 S~~~~~~~--~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~---------~~~~  229 (280)
                      |..+....  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++........+...         ....
T Consensus       158 S~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (278)
T 3sx2_A          158 SSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGN  237 (278)
T ss_dssp             CGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSC
T ss_pred             cHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhh
Confidence            98876521  115667899999999999999999999999999999999999999765332222211         1223


Q ss_pred             CCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          230 TYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       230 ~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ..| +++.+|+ |+|+++.||+++.++++||++|.+|||+++.
T Consensus       238 ~~p-~~~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~k  278 (278)
T 3sx2_A          238 AMP-VEVLAPE-DVANAVAWLVSDQARYITGVTLPVDAGFLNK  278 (278)
T ss_dssp             SSS-CSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTTC
T ss_pred             hcC-cCcCCHH-HHHHHHHHHhCcccccccCCEEeECCCcccC
Confidence            356 7888998 9999999999999999999999999998763

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-48  Score=328.47  Aligned_cols=254  Identities=31%  Similarity=0.556  Sum_probs=216.0

Q ss_pred             CCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555            9 LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus         9 ~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      +.+++..++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.++++
T Consensus        11 ~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~-~~~~v~   87 (267)
T 1vl8_A           11 HHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVS-NYEEVK   87 (267)
T ss_dssp             ------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTT-CHHHHH
T ss_pred             CCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEEcCCC-CHHHHH
Confidence            344566789999999999999999999999999999999999999888888777733322  36788899999 789999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc-cccC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA-ATSR  167 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~-~~~~  167 (280)
                      ++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.. +.. 
T Consensus        88 ~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-  164 (267)
T 1vl8_A           88 KLLEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV-  164 (267)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc-
Confidence            99999999999999999999986 345677889999999999999999999999999997644 68999999987 655 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                       +.++...|++||++++.|+++++.|++++||+||+|+||+++|++..... .+..... .....|++++.+|+ |+|+.
T Consensus       165 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~p~~~~~~p~-dvA~~  241 (267)
T 1vl8_A          165 -TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDY-MLKRIPLGRTGVPE-DLKGV  241 (267)
T ss_dssp             -CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHH-HHHTCTTSSCBCGG-GGHHH
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHH-HHhhCCCCCCcCHH-HHHHH
Confidence             55778899999999999999999999999999999999999999865432 1222222 22347899999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++.++++||++|.+|||+++
T Consensus       242 v~~l~s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          242 AVFLASEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHcCccccCCcCCeEEECCCCCC
Confidence            9999999899999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=5.3e-48  Score=325.11  Aligned_cols=241  Identities=23%  Similarity=0.381  Sum_probs=211.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEecc--CCCHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV--SANGAAIENSV   91 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~   91 (280)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|+  + +.+++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~-~~~~~~~~~   83 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG--RQPQWFILDLLTC-TSENCQQLA   83 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--CCCEEEECCTTTC-CHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CCceEEEEecccC-CHHHHHHHH
Confidence            3469999999999999999999999999999999999999999988888876543  2567788999  8 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.+
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~  160 (252)
T 3f1l_A           84 QRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQ--GRA  160 (252)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTS--CCT
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhcc--CCC
Confidence            999999999999999999865556888999999999999999999999999999998754 78999999998876  667


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||+|++.|+++++.|++++ |+||+|+||+++|++.......          .+..++.+|+ |+++.+.||+
T Consensus       161 ~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~-dva~~~~~L~  228 (252)
T 3f1l_A          161 NWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT----------EDPQKLKTPA-DIMPLYLWLM  228 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT----------CCGGGSBCTG-GGHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc----------cchhccCCHH-HHHHHHHHHc
Confidence            88999999999999999999999987 9999999999999986432111          2334567898 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++.++++||++|.+|||....
T Consensus       229 s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          229 GDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             SGGGTTCCSCEEESSCC----
T ss_pred             CccccCCCCCEEEeCCCcCCC
Confidence            999999999999999998654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-48  Score=323.80  Aligned_cols=246  Identities=27%  Similarity=0.477  Sum_probs=221.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   76 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK---GFKARGLVLNIS-DIESIQNFFAEI   76 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEecCC-CHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999999999888888764   347889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  +.+++.
T Consensus        77 ~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  152 (247)
T 3lyl_A           77 KAENLAIDILVNNAGIT-RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSA--GNPGQT  152 (247)
T ss_dssp             HHTTCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcc--CCCCcH
Confidence            99999999999999986 345677889999999999999999999999999998755 68999999998876  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|++.|+++++.+++++||+||+|+||+++|++.......  .........|.+++..|+ |+|+.+.||+++.
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~-dva~~i~~l~s~~  229 (247)
T 3lyl_A          153 NYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE--QKSFIATKIPSGQIGEPK-DIAAAVAFLASEE  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH--HHHHHHTTSTTCCCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH--HHHHHhhcCCCCCCcCHH-HHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999998765332  223344557999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      +.++||++|.+|||+.+
T Consensus       230 ~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          230 AKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             cCCccCCEEEECCCEec
Confidence            99999999999999976

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=4.3e-48  Score=330.66  Aligned_cols=248  Identities=23%  Similarity=0.354  Sum_probs=212.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++      +.++.++.+|++ +.++++++++++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~v~~~~~~~   73 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH------GGNAVGVVGDVR-SLQDQKRAAERC   73 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------BTTEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc------CCcEEEEEcCCC-CHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999998887766553      237888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSP----LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      .+.++++|+||||||+.....++    .+.+.++|++.+++|+.+++.++++++|+|.++  +|+||++||..+..  +.
T Consensus        74 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~  149 (281)
T 3zv4_A           74 LAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFY--PN  149 (281)
T ss_dssp             HHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTS--SS
T ss_pred             HHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhcc--CC
Confidence            99999999999999986433222    345667899999999999999999999999874  48999999998876  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--------hhhhhhhhhcCCCCCCCCCChHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--------KDWLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      ++...|++||+|+++|+++++.|++++ |+||+|+||+++|++......        .....+......|++|+++|+ |
T Consensus       150 ~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-d  227 (281)
T 3zv4_A          150 GGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE-E  227 (281)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGG-G
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHH-H
Confidence            788899999999999999999999987 999999999999998653211        011223344558999999999 9


Q ss_pred             HHHHHHHhhc-CCCCcccccEEEeCCcccCCCCC
Q 023555          243 LTSLVRYLVH-DSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       243 va~~~~~l~s-~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +|+++.||++ +.+.++||++|.+|||+++.+..
T Consensus       228 vA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~~  261 (281)
T 3zv4_A          228 YTGAYVFFATRGDSLPATGALLNYDGGMGVRGFL  261 (281)
T ss_dssp             GSHHHHHHHSTTTSTTCSSCEEEESSSGGGCCSS
T ss_pred             HHHHHHHhhcccccccccCcEEEECCCCccccch
Confidence            9999999999 78899999999999999998764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-48  Score=328.88  Aligned_cols=255  Identities=26%  Similarity=0.460  Sum_probs=217.4

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ +.++.++.+|++ +.+++++++
T Consensus         6 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~v~~~~   83 (267)
T 1iy8_A            6 SPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVS-DEAQVEAYV   83 (267)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTT-SHHHHHHHH
T ss_pred             CCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEccCC-CHHHHHHHH
Confidence            345578999999999999999999999999999999999999888888887765421 236888999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.+
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~  160 (267)
T 1iy8_A           84 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR--GIG  160 (267)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--BCS
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcc--CCC
Confidence            999999999999999999864325677889999999999999999999999999998754 68999999998876  567


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc--c-chhhhh---hhhhcCCCCCCCCCChHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL--M-KKDWLN---NVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~--~-~~~~~~---~~~~~~~p~~~~~~~~~~va~  245 (280)
                      +...|++||++++.|+++++.|++++||+||+|+||+++|++....  . ......   +......|++++++|+ |+|+
T Consensus       161 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dvA~  239 (267)
T 1iy8_A          161 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAA  239 (267)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH-HHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHH-HHHH
Confidence            8889999999999999999999999999999999999999986532  1 111111   0223347899999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+.||+++.++++||++|.+|||+.+.
T Consensus       240 ~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          240 VVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHcCccccCCCCCEEEECCCcccC
Confidence            999999999999999999999998753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.7e-48  Score=327.73  Aligned_cols=243  Identities=27%  Similarity=0.429  Sum_probs=212.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++++ .+.++++.+++.+.   +.++.++.+|++ +.+++++++++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-d~~~v~~~~~~  102 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA---GGRAVAIRADNR-DAEAIEQAIRE  102 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHHHHHHH
Confidence            46899999999999999999999999999999998665 56677777777653   347889999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++   .|+||++||..+.. .+.++.
T Consensus       103 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~-~~~~~~  177 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAEL-VPWPGI  177 (271)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTC-CCSTTC
T ss_pred             HHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhcc-CCCCCc
Confidence            999999999999999986 4467788999999999999999999999999999954   68999999976654 135788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++......  .. +......|++++++|+ |+|+++.||+++
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~~r~~~pe-dvA~~v~fL~s~  253 (271)
T 3v2g_A          178 SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD--HA-EAQRERIATGSYGEPQ-DIAGLVAWLAGP  253 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS--SH-HHHHHTCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch--hH-HHHHhcCCCCCCCCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999999764321  12 2233447999999999 999999999999


Q ss_pred             CCCcccccEEEeCCccc
Q 023555          254 SSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~  270 (280)
                      .++++||++|.||||+.
T Consensus       254 ~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          254 QGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             ccCCccCCEEEeCcCcc
Confidence            99999999999999985

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.9e-48  Score=327.86  Aligned_cols=255  Identities=27%  Similarity=0.415  Sum_probs=217.2

Q ss_pred             CCCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHH
Q 023555            6 SDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGA   85 (280)
Q Consensus         6 ~~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (280)
                      +...++.+++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.   + ++.++.+|++ +.+
T Consensus        16 ~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~-~~~~~~~Dv~-d~~   90 (276)
T 2b4q_A           16 PRGSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---G-DCQAIPADLS-SEA   90 (276)
T ss_dssp             -----CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS---S-CEEECCCCTT-SHH
T ss_pred             ccccccccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---C-ceEEEEeeCC-CHH
Confidence            3445556777899999999999999999999999999999999999998888887777431   2 6788899999 789


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC---CCeEEEEecc
Q 023555           86 AIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ---EGSVINISSI  162 (280)
Q Consensus        86 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~g~vv~vsS~  162 (280)
                      +++++++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.   .|+||++||.
T Consensus        91 ~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~  169 (276)
T 2b4q_A           91 GARRLAQALGELSARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSV  169 (276)
T ss_dssp             HHHHHHHHHHHHCSCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCH
Confidence            999999999999999999999999863 456778899999999999999999999999999987542   2899999998


Q ss_pred             ccccCCCCCCCC-CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhc--CCCCCCCCCC
Q 023555          163 AATSRGQLPGGV-AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR--TYPLRDFGTT  239 (280)
Q Consensus       163 ~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~p~~~~~~~  239 (280)
                      .+..  +.++.. .|++||++++.|+++++.|++++||+||+|+||+++|++....... .... ...  ..|++++.+|
T Consensus       170 ~~~~--~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~-~~~~~~~p~~r~~~p  245 (276)
T 2b4q_A          170 AGIS--AMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-PQAL-EADSASIPMGRWGRP  245 (276)
T ss_dssp             GGTC--CCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-HHHH-HHHHHTSTTSSCCCH
T ss_pred             HHcC--CCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-HHHH-HHhhcCCCCCCcCCH
Confidence            8876  556777 9999999999999999999999999999999999999986542211 1111 222  4789999999


Q ss_pred             hHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       240 ~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      + |+|+++.||+++.++++||++|.+|||+.+
T Consensus       246 ~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          246 E-EMAALAISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             H-HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             H-HHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            9 999999999999899999999999999864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=8.5e-48  Score=326.55  Aligned_cols=247  Identities=22%  Similarity=0.349  Sum_probs=212.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..+ ...+..+.+|++ +.+++++++   
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~-~~~~~~~~~---   80 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-DAILQPVVADLG-TEQGCQDVI---   80 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-TCEEEEEECCTT-SHHHHHHHH---
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEecCCC-CHHHHHHHH---
Confidence            368999999999999999999999999999999999999999999888876543 346788999999 666665554   


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                       ++++++|++|||||... ..++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++..
T Consensus        81 -~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  155 (267)
T 3t4x_A           81 -EKYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIM--PSQEMA  155 (267)
T ss_dssp             -HHCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTS--CCTTCH
T ss_pred             -HhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhcc--CCCcch
Confidence             56899999999999863 45777889999999999999999999999999998754 78999999998876  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhh---hcCCCCCCCCCChH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVA---SRTYPLRDFGTTDP  241 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~---~~~~p~~~~~~~~~  241 (280)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++......          .+......   ....|++|+++|+ 
T Consensus       156 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-  234 (267)
T 3t4x_A          156 HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE-  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH-
Confidence            999999999999999999999999999999999999997543211          11111111   1235789999999 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+|+++.||+++.++++||++|.+|||+..+
T Consensus       235 dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999999999999999999999998765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-48  Score=327.42  Aligned_cols=244  Identities=27%  Similarity=0.415  Sum_probs=197.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++ +.++++++++++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~-~~~~v~~~~~~~   75 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG------AAVRFRNADVT-NEADATAALAFA   75 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTT-CHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEccCC-CHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988877776652      26788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCC---CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEecccccc
Q 023555           95 WEAFGRIDALVNNAGVSGAVKS---PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATS  166 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~vv~vsS~~~~~  166 (280)
                      .+.+|++|+||||||.......   ..+.+.++|++.+++|+.+++.++++++|+|+++     ++.|+||++||..+..
T Consensus        76 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tpc_A           76 KQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD  155 (257)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence            9999999999999998643221   2267899999999999999999999999999874     2468999999998877


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPALTS  245 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~va~  245 (280)
                        +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++...... + ..+......|+ +|+++|+ |+|+
T Consensus       156 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~-~~~~~~~~~p~~~r~~~~~-dva~  230 (257)
T 3tpc_A          156 --GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ-D-VQDALAASVPFPPRLGRAE-EYAA  230 (257)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHH-HHHH
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH-H-HHHHHHhcCCCCCCCCCHH-HHHH
Confidence              667889999999999999999999999999999999999999999765432 2 22333344788 8999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++.||+++  .++||++|.+|||+++.
T Consensus       231 ~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          231 LVKHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHHHHccc--CCcCCcEEEECCCccCC
Confidence            99999985  79999999999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.3e-47  Score=324.26  Aligned_cols=250  Identities=25%  Similarity=0.440  Sum_probs=217.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.+++++++++
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~   79 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCDLS-SRSERQELMNT   79 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHH
Confidence            34689999999999999999999999999999999999998888888877653   236888999999 78999999999


Q ss_pred             HHHHc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.+.+ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++
T Consensus        80 ~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  155 (260)
T 2ae2_A           80 VANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGAL--AVPY  155 (260)
T ss_dssp             HHHHTTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTS--CCTT
T ss_pred             HHHHcCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc--CCCC
Confidence            99999 8999999999986 345667889999999999999999999999999998754 68999999988766  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhh---hhhcCCCCCCCCCChHHHHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN---VASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|++.......+...+   ......|++++.+|+ |+|+.+.|
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~v~~  234 (260)
T 2ae2_A          156 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAF  234 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH-HHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            88999999999999999999999999999999999999998653321111111   223347899999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++.++++||+++.+|||+.+.
T Consensus       235 l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          235 LCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HcCccccCCCCCEEEECCCcccc
Confidence            99998999999999999998763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=9.6e-49  Score=332.08  Aligned_cols=243  Identities=25%  Similarity=0.443  Sum_probs=207.4

Q ss_pred             CCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           10 DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      .+.+++++++|++|||||++|||+++|++|+++|++|++++|+.+.++              ....+.+|++ +.+++++
T Consensus        19 ~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------------~~~~~~~Dv~-~~~~~~~   83 (266)
T 3uxy_A           19 YFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------------ADLHLPGDLR-EAAYADG   83 (266)
T ss_dssp             -------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------------CSEECCCCTT-SHHHHHH
T ss_pred             chhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------------hhhccCcCCC-CHHHHHH
Confidence            345677899999999999999999999999999999999999865432              1234589999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +
T Consensus        84 ~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~  159 (266)
T 3uxy_A           84 LPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLR--P  159 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTB--C
T ss_pred             HHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC--C
Confidence            99999999999999999999863 45777899999999999999999999999999998755 78999999998876  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-----hhhhhhhhcCCCCCCCCCChHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-----DWLNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      .++...|++||+|++.|+++++.|++++||+||+|+||+++|++.......     +..........|++++.+|+ |+|
T Consensus       160 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA  238 (266)
T 3uxy_A          160 GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE-DIA  238 (266)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH-HHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHH-HHH
Confidence            688899999999999999999999999999999999999999986533211     11223344558999999999 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.||+++.++++||++|.+|||++++
T Consensus       239 ~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          239 DVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            9999999999999999999999998763

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-48  Score=326.00  Aligned_cols=245  Identities=28%  Similarity=0.450  Sum_probs=214.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~   79 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK---GVEARSYVCDVT-SEEAVIGTVDSVV   79 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TSCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999998888888877653   236888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++...
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  156 (262)
T 1zem_A           80 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVK--GPPNMAA  156 (262)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHS--CCTTBHH
T ss_pred             HHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc--CCCCCch
Confidence            99999999999999753445677889999999999999999999999999998754 68999999988876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc------------cc--hhhhhhhhhcCCCCCCCCCChH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL------------MK--KDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~------------~~--~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      |++||++++.|+++++.|++++||+||+|+||+++|++....            ..  ++...+......|++|+++|+ 
T Consensus       157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-  235 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-  235 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHH-
Confidence            999999999999999999999999999999999999986532            11  110222223447999999999 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                      |+|+++.||+++.++++||++|.+|||
T Consensus       236 dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          236 EIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            999999999999999999999999998

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.1e-47  Score=324.03  Aligned_cols=262  Identities=28%  Similarity=0.400  Sum_probs=223.0

Q ss_pred             CCCCCCCCC-CCcccCCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHH-HHHHHHHHhhcCCCcceEEE
Q 023555            1 MASQVSDCL-DLEPWCQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKQSGSSVRAMAV   76 (280)
Q Consensus         1 ~~~~~~~~~-~~~~~~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~   76 (280)
                      |+.+..... ...+++++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.+..+  .++.++
T Consensus         1 m~~~~~~~~~~~~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~   78 (267)
T 3gdg_A            1 MPGQQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG--IKAKAY   78 (267)
T ss_dssp             CCCCCCCSCSSHHHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC--CCEECC
T ss_pred             CCcccCCCCcccccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC--CceeEE
Confidence            444444433 3346678999999999999  9999999999999999999999886554 666666655443  368889


Q ss_pred             EeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeE
Q 023555           77 ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSV  156 (280)
Q Consensus        77 ~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~v  156 (280)
                      .+|++ +.++++++++++.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+|
T Consensus        79 ~~Dl~-~~~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~i  155 (267)
T 3gdg_A           79 KCQVD-SYESCEKLVKDVVADFGQIDAFIANAGAT-ADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSL  155 (267)
T ss_dssp             BCCTT-CHHHHHHHHHHHHHHTSCCSEEEECCCCC-CCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEE
T ss_pred             ecCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceE
Confidence            99999 78999999999999999999999999986 445678889999999999999999999999999998755 6899


Q ss_pred             EEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCC
Q 023555          157 INISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDF  236 (280)
Q Consensus       157 v~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~  236 (280)
                      |++||..+......++...|++||+|++.|+++++.|++++ |+||+|+||+++|++...... . .........|++++
T Consensus       156 v~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~-~-~~~~~~~~~~~~r~  232 (267)
T 3gdg_A          156 VITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPK-E-TQQLWHSMIPMGRD  232 (267)
T ss_dssp             EEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCH-H-HHHHHHTTSTTSSC
T ss_pred             EEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCH-H-HHHHHHhcCCCCCC
Confidence            99999887653322577899999999999999999999887 999999999999999865432 2 22334455899999


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++|+ |+|+.+.||+++.+.++||++|.+|||+++
T Consensus       233 ~~~~-dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          233 GLAK-ELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             EETH-HHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             cCHH-HHHhHhheeecCccccccCCEEEECCceec
Confidence            9999 999999999999999999999999999976

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.2e-47  Score=324.25  Aligned_cols=253  Identities=27%  Similarity=0.447  Sum_probs=217.2

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+..+|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.+++++++
T Consensus         7 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~   82 (260)
T 2zat_A            7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE---GLSVTGTVCHVG-KAEDRERLV   82 (260)
T ss_dssp             ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCC-CHHHHHHHH
Confidence            4455789999999999999999999999999999999999998888887777653   236788899999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+
T Consensus        83 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~  159 (260)
T 2zat_A           83 AMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYH--PFP  159 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcC--CCC
Confidence            999999999999999999864345677889999999999999999999999999998754 68999999998876  567


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||++++.|+++++.|++++||+||+|+||+++|++..................|++++..|+ |+|+++.||+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~v~~l~  238 (260)
T 2zat_A          160 NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPE-DCAGIVSFLC  238 (260)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGG-GGHHHHHHHT
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHc
Confidence            888999999999999999999999999999999999999998653221111112222336889999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++.+++++|+++.+|||+..+
T Consensus       239 s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          239 SEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             SGGGTTCCSCEEEESTTCCCC
T ss_pred             CcccCCccCCEEEECCCcccc
Confidence            999999999999999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-47  Score=322.54  Aligned_cols=248  Identities=30%  Similarity=0.507  Sum_probs=183.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+..   .++.++.+|++ +.++++++++
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~   78 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVS-DPESAKAMAD   78 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT-SHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCC-CHHHHHHHHH
Confidence            3457999999999999999999999999999999999999999999888887643   37889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCC--CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSG--AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++.+.++++|+||||||+..  ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+.     
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-----  152 (253)
T 3qiv_A           79 RTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW-----  152 (253)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc-----
Confidence            99999999999999999842  234567889999999999999999999999999998765 7899999998765     


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||+|++.|+++++.|++++||+||+|+||+++|++......+...... .+..|++++.+|+ |+++++.||
T Consensus       153 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dva~~~~~l  230 (253)
T 3qiv_A          153 LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDI-VKGLPLSRMGTPD-DLVGMCLFL  230 (253)
T ss_dssp             -------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CC-HHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHH-hccCCCCCCCCHH-HHHHHHHHH
Confidence            35568999999999999999999999999999999999999987655443333333 3447899999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++...++||++|.+|||+.++
T Consensus       231 ~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          231 LSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HSGGGTTCCSCEEEC-------
T ss_pred             cCccccCCCCCEEEECCCeecC
Confidence            9999999999999999999875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.3e-47  Score=327.50  Aligned_cols=255  Identities=17%  Similarity=0.228  Sum_probs=218.5

Q ss_pred             cccCCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      +.|.++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..+   ++.++.+|++ +.+++++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~---~~~~~~~Dl~-~~~~v~~   92 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN---PAAVLPCDVI-SDQEIKD   92 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC---CSEEEECCTT-CHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC---CceEEEeecC-CHHHHHH
Confidence            46678999999999988  7799999999999999999999987  3344455544443   4778999999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCC---CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAV---KSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT  165 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~  165 (280)
                      +++++.+.++++|+||||||+....   .++.+ .+.++|++.+++|+.+++.++++++|+|.++  .|+||++||..+.
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~  170 (280)
T 3nrc_A           93 LFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAE  170 (280)
T ss_dssp             HHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGT
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccc
Confidence            9999999999999999999986431   33444 8899999999999999999999999999764  6899999999887


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      .  +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|++++.+|+ |+|+
T Consensus       171 ~--~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-dvA~  247 (280)
T 3nrc_A          171 K--AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIM-EVGN  247 (280)
T ss_dssp             S--CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHH-HHHH
T ss_pred             c--CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHH-HHHH
Confidence            6  668889999999999999999999999999999999999999999876654343444444458999999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCCCCCCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      .+.||+++.+.++||++|.+|||+.+.++|.+
T Consensus       248 ~v~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  279 (280)
T 3nrc_A          248 TVAFLCSDMATGITGEVVHVDAGYHCVSMGNV  279 (280)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTGGGCCCC--
T ss_pred             HHHHHhCcccCCcCCcEEEECCCccccCCCCc
Confidence            99999999999999999999999999998753

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.9e-47  Score=324.70  Aligned_cols=250  Identities=26%  Similarity=0.466  Sum_probs=212.8

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      |...+++|++|||||++|||+++|++|+++|++|++++ ++.+.++...+++...   +.++.++.+|++ +.+++++++
T Consensus        19 p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~v~~~~   94 (269)
T 3gk3_A           19 PGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA---GRDFKAYAVDVA-DFESCERCA   94 (269)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT---TCCCEEEECCTT-CHHHHHHHH
T ss_pred             chhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCceEEEEecCC-CHHHHHHHH
Confidence            44468999999999999999999999999999999998 5566666666665442   347889999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+
T Consensus        95 ~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~  170 (269)
T 3gk3_A           95 EKVLADFGKVDVLINNAGIT-RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSR--GAF  170 (269)
T ss_dssp             HHHHHHHSCCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCT
T ss_pred             HHHHHHcCCCCEEEECCCcC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhcc--CCC
Confidence            99999999999999999986 345777899999999999999999999999999998754 68999999988876  667


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ++..|++||+|++.|+++++.+++++||+||+|+||+++|++....... ..........|++++.+|+ |+|+.+.||+
T Consensus       171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~-dvA~~v~~L~  248 (269)
T 3gk3_A          171 GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-VLEAKILPQIPVGRLGRPD-EVAALIAFLC  248 (269)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHH-HHHHHHHHHT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh-HHHHHhhhcCCcCCccCHH-HHHHHHHHHh
Confidence            8899999999999999999999999999999999999999998765332 2221233447899999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++.+.++||++|.+|||+.++
T Consensus       249 s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          249 SDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             STTCTTCCSCEEEESTTSCCC
T ss_pred             CCCcCCeeCcEEEECCCEeCc
Confidence            999999999999999998864

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-47  Score=322.45  Aligned_cols=251  Identities=27%  Similarity=0.465  Sum_probs=215.1

Q ss_pred             CCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           10 DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      +.++...+++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++.+.   +.++.++.+|++ +.++++
T Consensus         4 ~~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~   79 (256)
T 3ezl_A            4 HHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL---GFDFYASEGNVG-DWDSTK   79 (256)
T ss_dssp             ---------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT---TCCCEEEECCTT-CHHHHH
T ss_pred             CCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeeEEEecCCC-CHHHHH
Confidence            34455679999999999999999999999999999999988 6666677777776553   347888999999 789999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  
T Consensus        80 ~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--  155 (256)
T 3ezl_A           80 QAFDKVKAEVGEIDVLVNNAGIT-RDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK--  155 (256)
T ss_dssp             HHHHHHHHHTCCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG--
T ss_pred             HHHHHHHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc--
Confidence            99999999999999999999986 445778899999999999999999999999999998765 68999999998877  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.....+ +...... ...|++++.+|+ |+|+++.
T Consensus       156 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~-~~~~~~~~~~~~-dva~~~~  232 (256)
T 3ezl_A          156 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP-DVLEKIV-ATIPVRRLGSPD-EIGSIVA  232 (256)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-HHHHHHH-HHSTTSSCBCHH-HHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH-HHHHHHH-hcCCCCCCcCHH-HHHHHHH
Confidence            668889999999999999999999999999999999999999999876532 3333333 347999999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||+++.+.++||++|.+|||+++
T Consensus       233 ~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          233 WLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHhCCcccCCcCcEEEECCCEeC
Confidence            99999999999999999999976

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=5.9e-48  Score=327.78  Aligned_cols=242  Identities=28%  Similarity=0.474  Sum_probs=207.7

Q ss_pred             CCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           10 DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      ..++..++++|++|||||++|||+++|++|+++|++|++++|+.+...             .....+.+|++ +.+++++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~Dv~-~~~~v~~   70 (269)
T 3vtz_A            5 HHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------------NVSDHFKIDVT-NEEEVKE   70 (269)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------------TSSEEEECCTT-CHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------------CceeEEEecCC-CHHHHHH
Confidence            345666899999999999999999999999999999999999875431             14567899999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +
T Consensus        71 ~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~  146 (269)
T 3vtz_A           71 AVEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYA--A  146 (269)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--B
T ss_pred             HHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc--C
Confidence            9999999999999999999986 446777889999999999999999999999999998754 78999999998876  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhhhcCCCCCCCCCC
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRTYPLRDFGTT  239 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~p~~~~~~~  239 (280)
                      .++...|++||+|++.|+++++.|+++ ||+||+|+||+++|++......          .... +......|++++++|
T Consensus       147 ~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~r~~~p  224 (269)
T 3vtz_A          147 TKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKI-EEWGRQHPMGRIGRP  224 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHH-HHHHHHSTTSSCBCH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHH-HHHHhcCCCCCCcCH
Confidence            678899999999999999999999998 8999999999999998643211          1122 223344799999999


Q ss_pred             hHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       240 ~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      + |+|+++.||+++.+.++||++|.+|||+...
T Consensus       225 e-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  256 (269)
T 3vtz_A          225 E-EVAEVVAFLASDRSSFITGACLTVDGGLLSK  256 (269)
T ss_dssp             H-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             H-HHHHHHHHHhCCccCCCcCcEEEECCCcccc
Confidence            9 9999999999999999999999999999865

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.1e-47  Score=321.79  Aligned_cols=240  Identities=20%  Similarity=0.280  Sum_probs=196.6

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..++++++|++|||||++|||+++|++|+++|++|++++|+.+++.+..++.        .+.++.+|++ +.+++++++
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~Dv~-~~~~v~~~~   90 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA--------GAVALYGDFS-CETGIMAFI   90 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH--------TCEEEECCTT-SHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc--------CCeEEECCCC-CHHHHHHHH
Confidence            3566899999999999999999999999999999999999987764443332        3678899999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|+||||||..... . .+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+
T Consensus        91 ~~~~~~~g~iD~lv~nAg~~~~~-~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~  165 (260)
T 3gem_A           91 DLLKTQTSSLRAVVHNASEWLAE-T-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRK--GSS  165 (260)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCC-C-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGT--CCS
T ss_pred             HHHHHhcCCCCEEEECCCccCCC-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC--CCC
Confidence            99999999999999999986332 2 5678899999999999999999999999998754 68999999998876  667


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||+|++.|+++++.|+++ +|+||+|+||+++|++...   ..+. .......|++++++|+ |+|+++.||+
T Consensus       166 ~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~---~~~~-~~~~~~~p~~r~~~~e-dva~~v~~L~  239 (260)
T 3gem_A          166 KHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD---AAYR-ANALAKSALGIEPGAE-VIYQSLRYLL  239 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTH-HHHHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC---HHHH-HHHHhcCCCCCCCCHH-HHHHHHHHHh
Confidence            8899999999999999999999998 6999999999999987542   1222 2233347999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                        .+.++||++|.||||+++.+
T Consensus       240 --~~~~itG~~i~vdGG~~~~~  259 (260)
T 3gem_A          240 --DSTYVTGTTLTVNGGRHVKG  259 (260)
T ss_dssp             --HCSSCCSCEEEESTTTTTC-
T ss_pred             --hCCCCCCCEEEECCCcccCC
Confidence              47899999999999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-47  Score=328.55  Aligned_cols=260  Identities=26%  Similarity=0.412  Sum_probs=216.4

Q ss_pred             CCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555            7 DCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus         7 ~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      +.+...+|+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+...++.++.+|++ +.++
T Consensus        14 ~~~~~~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-d~~~   92 (297)
T 1xhl_A           14 LVPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT-EASG   92 (297)
T ss_dssp             ---------CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-SHHH
T ss_pred             cccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCC-CHHH
Confidence            344445677899999999999999999999999999999999999999888888887654222226888999999 7899


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCC--CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKS--PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA  164 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~  164 (280)
                      ++++++++.+.+|++|+||||||... ..+  +.+.+.++|++.+++|+.+++.++++++|.|.+++  |+||++||..+
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~  169 (297)
T 1xhl_A           93 QDDIINTTLAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVA  169 (297)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchh
Confidence            99999999999999999999999863 334  67889999999999999999999999999998643  89999999887


Q ss_pred             ccCCCC-CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--ch-----hhhhhhhhcCCCCCCC
Q 023555          165 TSRGQL-PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KK-----DWLNNVASRTYPLRDF  236 (280)
Q Consensus       165 ~~~~~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~-----~~~~~~~~~~~p~~~~  236 (280)
                      ..  +. ++...|++||+|++.|+++++.|++++||+||+|+||+++|++.....  ..     ...........|++++
T Consensus       170 ~~--~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  247 (297)
T 1xhl_A          170 GP--QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC  247 (297)
T ss_dssp             SS--SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             cc--CCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCC
Confidence            65  44 778899999999999999999999999999999999999999865431  10     1111122234689999


Q ss_pred             CCChHHHHHHHHHhhcCC-CCcccccEEEeCCcccCCC
Q 023555          237 GTTDPALTSLVRYLVHDS-SEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~-~~~i~G~~i~vdgG~~~~~  273 (280)
                      .+|+ |+|+.+.||+++. ++++||++|.+|||+.+..
T Consensus       248 ~~pe-dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~  284 (297)
T 1xhl_A          248 GKPE-EIANIIVFLADRNLSSYIIGQSIVADGGSTLVM  284 (297)
T ss_dssp             BCHH-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCC
T ss_pred             cCHH-HHHHHHHHHhCCcccCCccCcEEEECCCccccc
Confidence            9999 9999999999988 8999999999999988653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=4.1e-47  Score=326.17  Aligned_cols=248  Identities=25%  Similarity=0.340  Sum_probs=212.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHH-------
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGA-------   85 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------   85 (280)
                      |++|++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.+..+  .++.++.+|++ +.+       
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~-~~~~~~~~~~   80 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLS-NVATAPVSGA   80 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCS-SSCBCCCC--
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecC-Cccccccccc
Confidence            4578999999999999999999999999999999999 999888888888763322  36888999999 667       


Q ss_pred             ----------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCC--------------HHHHHHHHHhhhhHHHHHHH
Q 023555           86 ----------AIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLT--------------EEEWNHIMKTNLTGSWLVSK  141 (280)
Q Consensus        86 ----------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~  141 (280)
                                +++++++++.+.+|++|+||||||+.. ..++.+.+              .++|++.+++|+.+++.+++
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  159 (291)
T 1e7w_A           81 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  159 (291)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence                      999999999999999999999999863 35667778              89999999999999999999


Q ss_pred             HHHHHHHhcCC-----CCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC
Q 023555          142 YVCIRMRDANQ-----EGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       142 ~~~~~~~~~~~-----~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      +++|+|.+++.     .|+||++||..+..  +.++...|++||++++.|+++++.|++++||+||+|+||+++|++ . 
T Consensus       160 ~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-  235 (291)
T 1e7w_A          160 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-  235 (291)
T ss_dssp             HHHHHHHTSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-
T ss_pred             HHHHHHHhcCCCCCCCCcEEEEEechhhcC--CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-
Confidence            99999976431     58999999998876  667889999999999999999999999999999999999999999 4 


Q ss_pred             ccchhhhhhhhhcCCCCC-CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          217 LMKKDWLNNVASRTYPLR-DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       217 ~~~~~~~~~~~~~~~p~~-~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      . .+..... .....|++ ++.+|+ |+|+.+.||+++.++++||++|.+|||+.+.
T Consensus       236 ~-~~~~~~~-~~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          236 M-PPAVWEG-HRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             S-CHHHHHH-HHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             C-CHHHHHH-HHhhCCCCCCCCCHH-HHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            3 2222222 33447888 999999 9999999999999999999999999998764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.1e-47  Score=319.32  Aligned_cols=245  Identities=34%  Similarity=0.593  Sum_probs=214.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +|++|++|||||++|||++++++|+++|++|++++| +++++++..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   76 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL---GSDAIAVRADVA-NAEDVTNMVKQT   76 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHH
Confidence            478999999999999999999999999999999999 888888877777653   236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++..
T Consensus        77 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  152 (246)
T 2uvd_A           77 VDVFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVT--GNPGQA  152 (246)
T ss_dssp             HHHHSCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTBH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcC--CCCCCc
Confidence            99999999999999986 345677889999999999999999999999999998754 68999999988766  557888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++..... ...... .....|++++.+|+ |+|+.+.||+++.
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~-~~~~~p~~~~~~~~-dvA~~~~~l~s~~  229 (246)
T 2uvd_A          153 NYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD-ENIKAE-MLKLIPAAQFGEAQ-DIANAVTFFASDQ  229 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC-TTHHHH-HHHTCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC-HHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHcCch
Confidence            99999999999999999999999999999999999999876532 222222 22347889999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ++++||+++.+|||+++
T Consensus       230 ~~~~tG~~~~vdgG~~~  246 (246)
T 2uvd_A          230 SKYITGQTLNVDGGMVM  246 (246)
T ss_dssp             GTTCCSCEEEESTTSCC
T ss_pred             hcCCCCCEEEECcCccC
Confidence            99999999999999753

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.2e-47  Score=321.39  Aligned_cols=245  Identities=29%  Similarity=0.436  Sum_probs=212.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH--HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.  +++..+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~~~~   76 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---DQKAVFVGLDVT-DKANFDSAIDEAA   76 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT---TCCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHHH
Confidence            37999999999999999999999999999999999877  77777777543   236888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++.+|+||++||..+..  +.++...
T Consensus        77 ~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  153 (258)
T 3a28_C           77 EKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ--GFPILSA  153 (258)
T ss_dssp             HHHTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS--CCTTCHH
T ss_pred             HHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc--CCCCchh
Confidence            9999999999999986 345677889999999999999999999999999998755238999999988876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--------c--hhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--------K--KDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--------~--~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      |++||++++.|+++++.|++++||+||+|+||+++|++.....        .  ..... ......|++++.+|+ |+|+
T Consensus       154 Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~r~~~p~-dvA~  231 (258)
T 3a28_C          154 YSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFK-EYSSSIALGRPSVPE-DVAG  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHH-HHHTTCTTSSCBCHH-HHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHH-HHHhcCCCCCccCHH-HHHH
Confidence            9999999999999999999999999999999999999865321        1  11122 223347899999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++.||+++.++++||++|.+|||+.+
T Consensus       232 ~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          232 LVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHHHhCcccCCCCCCEEEECCCEec
Confidence            99999999999999999999999865

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.4e-47  Score=321.57  Aligned_cols=247  Identities=29%  Similarity=0.433  Sum_probs=208.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      |++|++|||||++|||++++++|+++|++|++++|+.+. ++++.+++.+..+  .++.++.+|++ +.++++++++++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~-~~~~v~~~~~~~~   78 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLYDGADLS-KGEAVRGLVDNAV   78 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT--SCEEEECCCTT-SHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC--CcEEEEECCCC-CHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999887 7777777755322  36788899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++...
T Consensus        79 ~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  154 (260)
T 1x1t_A           79 RQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV--ASANKSA  154 (260)
T ss_dssp             HHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHH
T ss_pred             HhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCc--CCCCCch
Confidence            9999999999999986 345667889999999999999999999999999998754 68999999998876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      |++||++++.|+++++.|++++||+||+|+||+++|++......          .+....+.....|++++.+|+ |+|+
T Consensus       155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dva~  233 (260)
T 1x1t_A          155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHH-HHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHH-HHHH
Confidence            99999999999999999999999999999999999998654321          111112202236889999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.||+++.++++||+++.+|||+++
T Consensus       234 ~~~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          234 TAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhChhhcCCCCCEEEECCCccC
Confidence            99999999899999999999999865

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-47  Score=318.02  Aligned_cols=243  Identities=32%  Similarity=0.526  Sum_probs=211.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++        .+.++.+|++ +.++++++++++.
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~D~~-~~~~~~~~~~~~~   72 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHPVVMDVA-DPASVERGFAEAL   72 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------TCEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------CCEEEEecCC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988777655432        2667889999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.. ..  +.+++..
T Consensus        73 ~~~g~id~lvn~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~--~~~~~~~  147 (245)
T 1uls_A           73 AHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YL--GNLGQAN  147 (245)
T ss_dssp             HHHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GG--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hc--CCCCchh
Confidence            9999999999999986 345677889999999999999999999999999997644 68999999987 55  5578889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||++++.|+++++.|++++||+||+|+||+++|++..... ...... .....|++++.+|+ |+|+.+.||+++.+
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~-~~~~~p~~~~~~~~-dvA~~v~~l~s~~~  224 (245)
T 1uls_A          148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP-EKVREK-AIAATPLGRAGKPL-EVAYAALFLLSDES  224 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC-HHHHHH-HHHTCTTCSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC-HHHHHH-HHhhCCCCCCcCHH-HHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999999876532 222222 22347889999999 99999999999989


Q ss_pred             CcccccEEEeCCcccCCCCC
Q 023555          256 EYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~~~~  275 (280)
                      .++||+++.+|||+.+...|
T Consensus       225 ~~~tG~~~~vdgG~~~~~~p  244 (245)
T 1uls_A          225 SFITGQVLFVDGGRTIGAAP  244 (245)
T ss_dssp             TTCCSCEEEESTTTTTTC--
T ss_pred             cCCcCCEEEECCCcccCCCC
Confidence            99999999999999876554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.9e-47  Score=323.90  Aligned_cols=249  Identities=27%  Similarity=0.476  Sum_probs=211.6

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .+.+++++|++|||||++|||+++|++|+++|++|++++|+ .+..+.+.+++.+.   +.++.++.+|++ +.++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~v~~~   97 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK---GYKAAVIKFDAA-SESDFIEA   97 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCceEEEECCCC-CHHHHHHH
Confidence            34557999999999999999999999999999999999995 55556666666543   347889999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.++++|++|||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.
T Consensus        98 ~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~  173 (271)
T 4iin_A           98 IQTIVQSDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGER--GN  173 (271)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CC
T ss_pred             HHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcC--CC
Confidence            9999999999999999999863 45667889999999999999999999999999998754 68999999998876  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||+|++.|+++++.+++++||+||+|+||+++|++.......  .........|++++.+|+ |+|+++.||
T Consensus       174 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~p~-dvA~~i~~l  250 (271)
T 4iin_A          174 MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE--LKADYVKNIPLNRLGSAK-EVAEAVAFL  250 (271)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHH-HHHHHHHHH
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH--HHHHHHhcCCcCCCcCHH-HHHHHHHHH
Confidence            88899999999999999999999999999999999999999997754321  222233447999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.+.++||++|.+|||+.+
T Consensus       251 ~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          251 LSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             hCCCcCCCcCCEEEeCCCeeC
Confidence            999999999999999999874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-47  Score=319.79  Aligned_cols=245  Identities=27%  Similarity=0.422  Sum_probs=213.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.++++++++++.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~v~~~~~~~~~~~   77 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---GGHAVAVKVDVS-DRDQVFAAVEQARKTL   77 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-SHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999998888888877653   236788999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      |++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++..|+||++||..+..  +.++...|++
T Consensus        78 g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~a  154 (256)
T 1geg_A           78 GGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSS  154 (256)
T ss_dssp             TCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--CCCCchhHHH
Confidence            9999999999986 345677889999999999999999999999999998754358999999988776  5678889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ||++++.|+++++.|++++||+||+|+||+++|++......         .+..........|++++.+|+ |+|+++.|
T Consensus       155 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~  233 (256)
T 1geg_A          155 SKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVSY  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            99999999999999999999999999999999998653210         111112233347899999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+++.++++||++|.+|||+++
T Consensus       234 l~s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          234 LASPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESSSSSC
T ss_pred             HhCccccCCCCCEEEeCCCccC
Confidence            9999999999999999999875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1e-46  Score=319.20  Aligned_cols=249  Identities=29%  Similarity=0.473  Sum_probs=216.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~-~~~~~~~~~~~~   79 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEVAVDVA-TPEGVDAVVESV   79 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC--CceEEEEcCCC-CHHHHHHHHHHH
Confidence            368899999999999999999999999999999999999888888777765422  36788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++..
T Consensus        80 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  155 (263)
T 3ai3_A           80 RSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQ--PLWYEP  155 (263)
T ss_dssp             HHHHSSCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC--CCCCcc
Confidence            99999999999999986 345777889999999999999999999999999998754 68999999998876  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhhhcC-CCCCCCCCChHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRT-YPLRDFGTTDPAL  243 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~-~p~~~~~~~~~~v  243 (280)
                      .|++||++++.|+++++.|++++||+||+|+||++.|++......          ......+ ... .|++++.+|+ |+
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~-dv  233 (263)
T 3ai3_A          156 IYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSV-ADEHAPIKRFASPE-EL  233 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHH-HHHHCTTCSCBCHH-HH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHH-HhcCCCCCCCcCHH-HH
Confidence            999999999999999999999999999999999999998653211          1111222 222 6889999999 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++.||+++.+.+++|+++.+|||+.++
T Consensus       234 A~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          234 ANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            99999999998999999999999998764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.1e-47  Score=318.24  Aligned_cols=243  Identities=22%  Similarity=0.293  Sum_probs=209.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +|++|||||++|||+++|++|+++|  +.|++++|+++.++++.+++.      .++.++.+|++ +.++++++++++.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~-~~~~v~~~~~~~~~   74 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG------DRFFYVVGDIT-EDSVLKQLVNAAVK   74 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG------GGEEEEESCTT-SHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC------CceEEEECCCC-CHHHHHHHHHHHHH
Confidence            7999999999999999999999995  689999999988888777652      37889999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|+++  +|+||++||..+..  +.+++..|
T Consensus        75 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~g~iv~isS~~~~~--~~~~~~~Y  150 (254)
T 3kzv_A           75 GHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--NGNVVFVSSDACNM--YFSSWGAY  150 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCSCCCC--SSCCSHHH
T ss_pred             hcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCeEEEEcCchhcc--CCCCcchH
Confidence            999999999999986555788899999999999999999999999999999875  38999999998876  66888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-------hhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-------KDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ++||+|++.|+++++.|+  +||+||+|+||+++|++......       .+...+......|++|+++|+ |+|+++.|
T Consensus       151 ~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-dva~~v~~  227 (254)
T 3kzv_A          151 GSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSS-VPATVYAK  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcc-cHHHHHHH
Confidence            999999999999999998  68999999999999999765421       112222333347999999999 99999999


Q ss_pred             hhcCC-CCcccccEEEeCCcccCCCCC
Q 023555          250 LVHDS-SEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       250 l~s~~-~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      |+++. ++++||++|.+|||....-+|
T Consensus       228 L~s~~~~~~itG~~i~vdg~~~~~~~P  254 (254)
T 3kzv_A          228 LALHGIPDGVNGQYLSYNDPALADFMP  254 (254)
T ss_dssp             HHHHCCCGGGTTCEEETTCGGGGGGCC
T ss_pred             HHhhcccCCCCccEEEecCccccccCC
Confidence            99999 499999999999998776554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=5e-47  Score=323.45  Aligned_cols=254  Identities=29%  Similarity=0.451  Sum_probs=218.9

Q ss_pred             CCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555            7 DCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus         7 ~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      +.....+|.++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.++
T Consensus        10 ~~~~~~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-~~~~   85 (277)
T 2rhc_B           10 LVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---GVEADGRTCDVR-SVPE   85 (277)
T ss_dssp             CCCTTTTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHH
T ss_pred             CCccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEECCCC-CHHH
Confidence            334445565799999999999999999999999999999999999998888888877653   236788999999 7899


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--HHhcCCCCeEEEEecccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIR--MRDANQEGSVINISSIAA  164 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~g~vv~vsS~~~  164 (280)
                      ++++++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.  |.+++ .|+||++||..+
T Consensus        86 v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~  163 (277)
T 2rhc_B           86 IEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGG  163 (277)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGG
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECcccc
Confidence            9999999999999999999999986 3456778899999999999999999999999999  87654 689999999887


Q ss_pred             ccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhhhcCCCCC
Q 023555          165 TSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRTYPLR  234 (280)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~p~~  234 (280)
                      ..  +.++...|++||++++.|+++++.|++++||+||+|+||+++|++......          ..... ......|++
T Consensus       164 ~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~  240 (277)
T 2rhc_B          164 KQ--GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFD-RITARVPIG  240 (277)
T ss_dssp             TS--CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHH-HHHHHSTTS
T ss_pred             cc--CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHH-HHHhcCCCC
Confidence            76  567888999999999999999999999999999999999999998653211          11112 222336899


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ++.+|+ |+|+++.||+++.++++||++|.+|||+.
T Consensus       241 r~~~~~-dvA~~v~~l~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          241 RYVQPS-EVAEMVAYLIGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             SCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CCcCHH-HHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            999999 99999999999989999999999999975

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=9.2e-48  Score=329.45  Aligned_cols=249  Identities=27%  Similarity=0.388  Sum_probs=209.2

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC------------hhHHHHHHHHHHhhcCCCcceEEEEec
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKQSGSSVRAMAVELD   79 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (280)
                      .+|.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++...++...   +.++.++.+|
T Consensus         3 ~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D   79 (287)
T 3pxx_A            3 GSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT---GRKAYTAEVD   79 (287)
T ss_dssp             TSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT---TSCEEEEECC
T ss_pred             CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc---CCceEEEEcc
Confidence            35678999999999999999999999999999999999997            66777777666553   3478899999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 023555           80 VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI  159 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~v  159 (280)
                      ++ +.++++++++++.+.++++|+||||||+....   .+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++
T Consensus        80 ~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~i  152 (287)
T 3pxx_A           80 VR-DRAAVSRELANAVAEFGKLDVVVANAGICPLG---AHLPVQAFADAFDVDFVGVINTVHAALPYLTS---GASIITT  152 (287)
T ss_dssp             TT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC---TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEE
T ss_pred             CC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc---CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEe
Confidence            99 78999999999999999999999999986432   24788999999999999999999999999832   6899999


Q ss_pred             eccccccCC---------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh---------
Q 023555          160 SSIAATSRG---------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD---------  221 (280)
Q Consensus       160 sS~~~~~~~---------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~---------  221 (280)
                      ||..+....         +.++...|++||++++.|+++++.|++++||+||+|+||+++|++........         
T Consensus       153 sS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  232 (287)
T 3pxx_A          153 GSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAP  232 (287)
T ss_dssp             CCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSC
T ss_pred             ccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccc
Confidence            998776421         01456789999999999999999999999999999999999999976421100         


Q ss_pred             -----hhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          222 -----WLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       222 -----~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                           ..........| +++++|+ |+|+++.||+|+.++++||++|.||||+++.
T Consensus       233 ~~~~~~~~~~~~~~~~-~~~~~p~-dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          233 SRADALLAFPAMQAMP-TPYVEAS-DISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             CHHHHHHHGGGGCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhHHHHhhhhhhcccC-CCCCCHH-HHHhhHheecchhhcCCCCceEeECchhhhc
Confidence                 00011223355 8899999 9999999999999999999999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=8.3e-47  Score=317.26  Aligned_cols=241  Identities=28%  Similarity=0.433  Sum_probs=201.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +|++|++|||||++|||++++++|+++|++|++++|+. +++++   ++.+.   +.++.++.+|++ +.++++++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~~~   76 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL---GRRVLTVKCDVS-QPGDVEAFGKQV   76 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT---TCCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc---CCcEEEEEeecC-CHHHHHHHHHHH
Confidence            58899999999999999999999999999999999998 66654   23222   236788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++..
T Consensus        77 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  152 (249)
T 2ew8_A           77 ISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWL--KIEAYT  152 (249)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS--CCSSCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcc--CCCCch
Confidence            99999999999999986 345677889999999999999999999999999998754 68999999998876  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc-Cccch--hhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE-GLMKK--DWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~-~~~~~--~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++.. .....  +....+.   .|++++.+|+ |+|+.+.||+
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~-dva~~~~~l~  228 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML---QAIPRLQVPL-DLTGAAAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT---SSSCSCCCTH-HHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh---CccCCCCCHH-HHHHHHHHHc
Confidence            99999999999999999999999999999999999999865 32211  1111111   5889999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccC
Q 023555          252 HDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++.++++||+++.+|||++.
T Consensus       229 s~~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          229 SDDASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             SGGGTTCCSCEEEESSSCCC
T ss_pred             CcccCCCCCcEEEECCCccC
Confidence            99899999999999999864

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-47  Score=322.43  Aligned_cols=254  Identities=20%  Similarity=0.244  Sum_probs=212.1

Q ss_pred             CCcccCCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHH
Q 023555           10 DLEPWCQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAI   87 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   87 (280)
                      +.++..++++|++|||||+  +|||+++|++|+++|++|++++|+....+. .+++.+..+   ++.++.+|++ +.+++
T Consensus         5 ~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~---~~~~~~~Dv~-~~~~v   79 (271)
T 3ek2_A            5 HHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFG---SELVFPCDVA-DDAQI   79 (271)
T ss_dssp             ----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTT---CCCEEECCTT-CHHHH
T ss_pred             CCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcC---CcEEEECCCC-CHHHH
Confidence            3446668999999999999  999999999999999999999998544433 344444333   4778999999 78999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCC---CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           88 ENSVQKAWEAFGRIDALVNNAGVSGAV---KSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        88 ~~~~~~~~~~~g~id~li~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      +++++++.+.++++|+||||||+....   .++.+ .+.++|++.+++|+.+++.++++++|+|++   .|+||++||..
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~  156 (271)
T 3ek2_A           80 DALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLG  156 (271)
T ss_dssp             HHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGG
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccc
Confidence            999999999999999999999986431   44555 899999999999999999999999999864   58999999998


Q ss_pred             cccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHH
Q 023555          164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      +..  +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|++++.+|+ |+
T Consensus       157 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-dv  233 (271)
T 3ek2_A          157 AER--AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIE-QV  233 (271)
T ss_dssp             GTS--BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHH-HH
T ss_pred             ccc--CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHH-HH
Confidence            876  668889999999999999999999999999999999999999999876654333344444458999999999 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      |+.+.||+++.+.++||++|.+|||+.+...
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~  264 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVG  264 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCC
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehh
Confidence            9999999999999999999999999998753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-46  Score=320.79  Aligned_cols=254  Identities=27%  Similarity=0.418  Sum_probs=216.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+......++.++.+|++ +.++++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~   80 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT-TEDGQDQIINST   80 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCC-CHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999888888877653222226888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCC----CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKS----PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      .+.+|++|+||||||.... .+    +.+.+.++|++.+++|+.+++.++++++|.|.+++  |+||++||..+..  +.
T Consensus        81 ~~~~g~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~--~~  155 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGP--QA  155 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSS--SC
T ss_pred             HHhcCCCCEEEECCCCCCC-CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccC--CC
Confidence            9999999999999998633 34    56789999999999999999999999999997643  8999999988765  44


Q ss_pred             -CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--ch-----hhhhhhhhcCCCCCCCCCChHH
Q 023555          171 -PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KK-----DWLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       171 -~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~-----~~~~~~~~~~~p~~~~~~~~~~  242 (280)
                       ++...|++||++++.|+++++.|++++||+||+|+||+++|++.....  ..     ...........|++++.+|+ |
T Consensus       156 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-d  234 (280)
T 1xkq_A          156 QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-H  234 (280)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-H
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHH-H
Confidence             678899999999999999999999999999999999999999865431  10     11112222346899999999 9


Q ss_pred             HHHHHHHhhcCC-CCcccccEEEeCCcccCCCCC
Q 023555          243 LTSLVRYLVHDS-SEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       243 va~~~~~l~s~~-~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +|+.+.||+++. +.++||++|.+|||+.+...+
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~~~~  268 (280)
T 1xkq_A          235 IANIILFLADRNLSFYILGQSIVADGGTSLVMGT  268 (280)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGGGCBGG
T ss_pred             HHHHHHHhcCcccccCccCCeEEECCCcccccCc
Confidence            999999999987 889999999999999876444

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.7e-46  Score=318.32  Aligned_cols=253  Identities=21%  Similarity=0.268  Sum_probs=218.3

Q ss_pred             CCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||+  +|||+++|++|+++|++|++++|+....+...+.. +..+ ..++.++.+|++ +.++++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~-~~~~v~~~~~   79 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELA-GTLD-RNDSIILPCDVT-NDAEIETCFA   79 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-HTSS-SCCCEEEECCCS-SSHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-HhcC-CCCceEEeCCCC-CHHHHHHHHH
Confidence            37899999999999  66999999999999999999999875555444433 3332 226888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      ++.+.++++|++|||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~  154 (266)
T 3oig_A           80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGEL--V  154 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTS--C
T ss_pred             HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccc--c
Confidence            999999999999999998642   356678899999999999999999999999999864   58999999998876  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .+++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|++++.+|+ |+|+.+.|
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-dva~~v~~  233 (266)
T 3oig_A          155 MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPE-EVGDTAAF  233 (266)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            68889999999999999999999999999999999999999999876654333333344447999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      |+++.+.++||++|.+|||++....+.
T Consensus       234 l~s~~~~~~tG~~i~vdGG~~~~~~~~  260 (266)
T 3oig_A          234 LFSDMSRGITGENLHVDSGFHITARLE  260 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred             HcCCchhcCcCCEEEECCCeEEeeecC
Confidence            999999999999999999999876553

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.9e-46  Score=321.68  Aligned_cols=253  Identities=26%  Similarity=0.389  Sum_probs=208.5

Q ss_pred             CCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCC----
Q 023555            9 LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSAN----   83 (280)
Q Consensus         9 ~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----   83 (280)
                      +..++..+|++|++|||||++|||+++|++|+++|++|++++|+. +.++++.+++....+  .++.++.+|++ +    
T Consensus        13 ~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~-~~~~~   89 (288)
T 2x9g_A           13 GLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLT-NSNVL   89 (288)
T ss_dssp             ---------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCS-CSTTH
T ss_pred             ccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecC-CccCC
Confidence            334466689999999999999999999999999999999999998 888888887753322  36888999999 7    


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCC-----CC-----CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-----LD-----LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-  152 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-  152 (280)
                      .++++++++++.+.++++|+||||||+... .++     .+     .+.++|++.+++|+.+++.++++++|+|++++. 
T Consensus        90 ~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  168 (288)
T 2x9g_A           90 PASCEEIINSCFRAFGRCDVLVNNASAFYP-TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN  168 (288)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC
Confidence            899999999999999999999999998633 344     45     788999999999999999999999999976431 


Q ss_pred             ----CCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhh
Q 023555          153 ----EGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS  228 (280)
Q Consensus       153 ----~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~  228 (280)
                          .|+||++||..+..  +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++ . .. .+....+ .
T Consensus       169 ~~~~~g~iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~-~~~~~~~-~  242 (288)
T 2x9g_A          169 CTSSNLSIVNLCDAMVDQ--PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG-EEEKDKW-R  242 (288)
T ss_dssp             --CCCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-HHHHHHH-H
T ss_pred             CCCCCeEEEEEecccccC--CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-hHHHHHH-H
Confidence                58999999998876  667888999999999999999999999999999999999999998 4 22 2222222 2


Q ss_pred             cCCCCCCC-CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          229 RTYPLRDF-GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       229 ~~~p~~~~-~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ...|++++ .+|+ |+|+.+.||+++.++++||++|.+|||+.+.
T Consensus       243 ~~~p~~r~~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          243 RKVPLGRREASAE-QIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             HTCTTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhCCCCCCCCCHH-HHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            34788998 8998 9999999999999999999999999998764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.6e-46  Score=317.91  Aligned_cols=250  Identities=28%  Similarity=0.488  Sum_probs=213.7

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +..++++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..      ++.++.+|++ +.++++++
T Consensus         4 m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~-d~~~v~~~   76 (263)
T 3ak4_A            4 MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN------GGFAVEVDVT-KRASVDAA   76 (263)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT------CCEEEECCTT-CHHHHHHH
T ss_pred             cccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------CCeEEEEeCC-CHHHHHHH
Confidence            3455678999999999999999999999999999999999998877766554421      5678899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..+..  +.
T Consensus        77 ~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  153 (263)
T 3ak4_A           77 MQKAIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV--GA  153 (263)
T ss_dssp             HHHHHHHHTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CC
T ss_pred             HHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc--CC
Confidence            999999999999999999986 345677889999999999999999999999999998754368999999988766  55


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----h-----hhhhhhhhcCCCCCCCCCChH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----K-----DWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~-----~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      ++...|++||++++.|+++++.|++++||+||+|+||+++|++......    .     +..........|++++..|+ 
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-  232 (263)
T 3ak4_A          154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPE-  232 (263)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHH-
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHH-
Confidence            7788999999999999999999999999999999999999998643210    0     11112223347899999999 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+|+++.||+++.+++++|++|.+|||+++
T Consensus       233 dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          233 DVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            999999999999889999999999999864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.2e-47  Score=319.95  Aligned_cols=243  Identities=26%  Similarity=0.441  Sum_probs=208.9

Q ss_pred             CCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555            7 DCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus         7 ~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      .++.+.+++++++|++|||||++|||+++|++|+++|++|++++|+.+..+            ..++.++.+|++ +.++
T Consensus        16 ~~~~~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dv~-d~~~   82 (260)
T 3un1_A           16 ENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------------DPDIHTVAGDIS-KPET   82 (260)
T ss_dssp             ----CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------------STTEEEEESCTT-SHHH
T ss_pred             hhhhhhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------------cCceEEEEccCC-CHHH
Confidence            345567788899999999999999999999999999999999999865422            226888999999 7899


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      ++++++++.+.+|++|++|||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..
T Consensus        83 v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~  160 (260)
T 3un1_A           83 ADRIVREGIERFGRIDSLVNNAGVF-LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQ  160 (260)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTS
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcc
Confidence            9999999999999999999999986 345777889999999999999999999999999998754 78999999987754


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      ..+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++....     .........|+++++.|+ |+|++
T Consensus       161 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-----~~~~~~~~~p~~r~~~~~-dva~a  234 (260)
T 3un1_A          161 PMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-----THSTLAGLHPVGRMGEIR-DVVDA  234 (260)
T ss_dssp             CBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-----GHHHHHTTSTTSSCBCHH-HHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-----HHHHHhccCCCCCCcCHH-HHHHH
Confidence            334456678999999999999999999999999999999999999987532     122233447999999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.||  +.+.++||++|.+|||+.+.
T Consensus       235 v~~L--~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          235 VLYL--EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHH--HHCTTCCSCEEEESTTGGGC
T ss_pred             HHHh--cccCCCCCcEEEECCCeecc
Confidence            9999  56789999999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-47  Score=317.69  Aligned_cols=246  Identities=25%  Similarity=0.323  Sum_probs=214.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++      +.++.++.+|++ +.++++++++++.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~v~~~~~~~~   75 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMFVRHDVS-SEADWTLVMAAVQ   75 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEEECCCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCceEEEEccCC-CHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999998888776665      126788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++  |+||++||..+..  +.++...
T Consensus        76 ~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~--~~~~~~~  150 (253)
T 1hxh_A           76 RRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWL--PIEQYAG  150 (253)
T ss_dssp             HHHCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTS--CCTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcC--CCCCCcc
Confidence            9999999999999986 345677889999999999999999999999999997643  8999999998876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCC--CeEEEEeecCcccCccccCccchhhhhhhhhc---CCCCCCCCCChHHHHHHHHHh
Q 023555          176 YASSKAGLNAMTKCLSLELGVH--KIRVNSICPGLFKSEITEGLMKKDWLNNVASR---TYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~--gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~va~~~~~l  250 (280)
                      |++||++++.|+++++.|++++  ||+||+|+||+++|++................   ..|++++.+|+ |+|+.+.||
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l  229 (253)
T 1hxh_A          151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHH-HHHHHHHHH
Confidence            9999999999999999999888  99999999999999986532111111121222   46888999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      +++.+++++|+++.+|||+...++
T Consensus       230 ~s~~~~~~tG~~~~vdgG~~~~~~  253 (253)
T 1hxh_A          230 ASDESSVMSGSELHADNSILGMGL  253 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCTTTTC
T ss_pred             cCccccCCCCcEEEECCCccccCC
Confidence            999999999999999999987763

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.6e-46  Score=317.38  Aligned_cols=246  Identities=27%  Similarity=0.434  Sum_probs=213.9

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEE-EecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.++.+|++|||||++|||+++|++|+++|++|++ ..|+.+.+++..+++.+..   .++.++.+|++ +.++++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~-~~~~~~~~~~   96 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG---GNGRLLSFDVA-NREQCREVLE   96 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT-CHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CceEEEEecCC-CHHHHHHHHH
Confidence            34688999999999999999999999999999965 5577778888888876643   37888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.++++.|+||++||..+..  +.++
T Consensus        97 ~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  173 (267)
T 4iiu_A           97 HEIAQHGAWYGVVSNAGIA-RDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM--GNRG  173 (267)
T ss_dssp             HHHHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH--CCTT
T ss_pred             HHHHHhCCccEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc--CCCC
Confidence            9999999999999999986 345677889999999999999999999999999997555579999999988877  6678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|++||+|++.|+++++.|++++||+||+|+||+++|++....  ...... .....|++++.+|+ |+|+++.||++
T Consensus       174 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~-~~~~~p~~~~~~~e-dva~~~~~L~s  249 (267)
T 4iiu_A          174 QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKE-AMSMIPMKRMGQAE-EVAGLASYLMS  249 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHH-HHHTCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999999997654  222333 33447999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCccc
Q 023555          253 DSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~  270 (280)
                      +.+.++||++|.+|||+.
T Consensus       250 ~~~~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          250 DIAGYVTRQVISINGGML  267 (267)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             CcccCccCCEEEeCCCcC
Confidence            999999999999999973

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-46  Score=315.41  Aligned_cols=244  Identities=27%  Similarity=0.433  Sum_probs=209.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |++|++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++.       + .++.+|++ +.+++++++++
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-------~-~~~~~D~~-~~~~~~~~~~~   70 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-------G-AFFQVDLE-DERERVRFVEE   70 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-------C-EEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-------C-CEEEeeCC-CHHHHHHHHHH
Confidence            356899999999999999999999999999999999999877 65555542       3 67899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++.
T Consensus        71 ~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~  146 (256)
T 2d1y_A           71 AAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLF--AEQEN  146 (256)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS--BCTTB
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccC--CCCCC
Confidence            999999999999999986 345677889999999999999999999999999998754 68999999988876  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc----c-chhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL----M-KKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~----~-~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      ..|++||++++.|+++++.|++++||+||+|+||+++|++....    . ..... .......|++++.+|+ |+|+.+.
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-dvA~~~~  224 (256)
T 2d1y_A          147 AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTR-RDWEDLHALRRLGKPE-EVAEAVL  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------C-HHHHTTSTTSSCBCHH-HHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHH-HHHHhcCCCCCCcCHH-HHHHHHH
Confidence            89999999999999999999999999999999999999986432    1 11111 1223346889999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ||+++.+++++|+++.+|||+.+..
T Consensus       225 ~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          225 FLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHhCchhcCCCCCEEEECCCccccc
Confidence            9999988999999999999987643

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.5e-46  Score=316.34  Aligned_cols=248  Identities=22%  Similarity=0.358  Sum_probs=211.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+..+ +.++.++.+|++ +.++++++++++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~v~~~~~~~~   81 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS-GAQVDIVAGDIR-EPGDIDRLFEKAR   81 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCeEEEEEccCC-CHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999888888877764311 226788899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+| +|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...
T Consensus        82 ~~~g-id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  156 (260)
T 2z1n_A           82 DLGG-ADILVYSTGGP-RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLR--PWQDLAL  156 (260)
T ss_dssp             HTTC-CSEEEECCCCC-CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHH
T ss_pred             HhcC-CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcC--CCCCCch
Confidence            9998 99999999975 345677889999999999999999999999999998754 68999999998876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc---------cchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL---------MKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |++||++++.|+++++.|++++||+||+|+||+++|++....         ..............|++++++|+ |+|+.
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~  235 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPE-ELASV  235 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHH-HHHHH
Confidence            999999999999999999999999999999999999986521         11111012223346899999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++.++++||++|.+|||+++
T Consensus       236 v~~l~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          236 VAFLASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHhCccccCCCCCEEEeCCCccC
Confidence            9999999999999999999999763

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.7e-47  Score=325.52  Aligned_cols=244  Identities=18%  Similarity=0.289  Sum_probs=213.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-------HHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-------RLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+..   .++.++.+|++ +.++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~-~~~~   79 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG---GQALPIVGDIR-DGDA   79 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT---SEEEEEECCTT-SHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC---CcEEEEECCCC-CHHH
Confidence            45799999999999999999999999999999999999876       4666677776542   37889999999 7899


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      ++++++++.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..
T Consensus        80 v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~  157 (285)
T 3sc4_A           80 VAAAVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLE  157 (285)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhcc
Confidence            9999999999999999999999986 456788899999999999999999999999999997644 78999999988765


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecC-cccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPG-LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      . ..++...|++||+|+++|+++++.|++++||+||+|+|| .+.|++....         .....|++++.+|+ |+|+
T Consensus       158 ~-~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~---------~~~~~~~~r~~~pe-dvA~  226 (285)
T 3sc4_A          158 P-KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL---------LGGDEAMARSRKPE-VYAD  226 (285)
T ss_dssp             G-GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH---------HTSCCCCTTCBCTH-HHHH
T ss_pred             C-CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh---------ccccccccCCCCHH-HHHH
Confidence            2 126678999999999999999999999999999999999 6888875432         22335788999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      .+.||+++.+ ++||+.+.+|||+...+..
T Consensus       227 ~~~~l~s~~~-~~tG~~i~~dgg~~~~g~~  255 (285)
T 3sc4_A          227 AAYVVLNKPS-SYTGNTLLCEDVLLESGVT  255 (285)
T ss_dssp             HHHHHHTSCT-TCCSCEEEHHHHHHHHTCC
T ss_pred             HHHHHhCCcc-cccceEEEEcCchhccCcc
Confidence            9999999988 9999999999998876654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-46  Score=322.60  Aligned_cols=249  Identities=29%  Similarity=0.430  Sum_probs=216.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC---eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .++++|++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++.+..+ +.++.++.+|++ +.+++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~-d~~~v~~~~  106 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP-NAKVHVAQLDIT-QAEKIKPFI  106 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT-TCEEEEEECCTT-CGGGHHHHH
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEECCCC-CHHHHHHHH
Confidence            468999999999999999999999999998   999999999999999988876532 347889999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~--~~~  183 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRD--AYP  183 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCT
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcC--CCC
Confidence            999999999999999999875456788899999999999999999999999999998754 79999999999876  668


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--chhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--KKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      +...|++||+|+++|+++++.|++++||+||+|+||+++|++.....  ..+..........|+    +|+ |+|+++.|
T Consensus       184 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~----~pe-dvA~~v~~  258 (287)
T 3rku_A          184 TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL----MAD-DVADLIVY  258 (287)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCE----EHH-HHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCC----CHH-HHHHHHHH
Confidence            88999999999999999999999999999999999999999853221  112222222222343    677 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      |+++.+.+++|+.+.+|||...+.
T Consensus       259 l~s~~~~~i~g~~i~v~~g~~~p~  282 (287)
T 3rku_A          259 ATSRKQNTVIADTLIFPTNQASPH  282 (287)
T ss_dssp             HHTSCTTEEEEEEEEEETTEEETT
T ss_pred             HhCCCCCeEecceEEeeCCCCCCc
Confidence            999999999999999999987653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.8e-46  Score=316.11  Aligned_cols=243  Identities=33%  Similarity=0.418  Sum_probs=211.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++      +.++.++.+|++ +.++++++++++.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~~~~~   74 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQHLDVT-IEEDWQRVVAYAR   74 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------GGGEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceeEEEecCC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988877766554      236788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...
T Consensus        75 ~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  150 (254)
T 1hdc_A           75 EEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM--GLALTSS  150 (254)
T ss_dssp             HHHSCCCEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc--CCCCchh
Confidence            9999999999999986 335667889999999999999999999999999998754 68999999998876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCC-CChHHHHHHHHHhhcCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG-TTDPALTSLVRYLVHDS  254 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~va~~~~~l~s~~  254 (280)
                      |++||++++.|+++++.|++++||+||+|+||+++|++..... ...... .....|++++. +|+ |+|+.+.||+++.
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~-~~~~~p~~~~~~~~~-dvA~~v~~l~s~~  227 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG-IRQGEG-NYPNTPMGRVGNEPG-EIAGAVVKLLSDT  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT-CCCSTT-SCTTSTTSSCB-CHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccc-hhHHHH-HHhcCCCCCCCCCHH-HHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999865321 111111 22336888888 898 9999999999998


Q ss_pred             CCcccccEEEeCCcccCC
Q 023555          255 SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~  272 (280)
                      +++++|+++.+|||+.+.
T Consensus       228 ~~~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          228 SSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             GTTCCSCEEEESTTTTTS
T ss_pred             hcCCCCCEEEECCCcccc
Confidence            999999999999998763

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-46  Score=318.55  Aligned_cols=243  Identities=27%  Similarity=0.450  Sum_probs=210.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.       .+.++.+|++ +.++++++++++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~Dv~-d~~~v~~~~~~~   76 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVT-QEDDVKTLVSET   76 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------CCeEEEcCCC-CHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999888776655442       3678899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|+++  .|+||++||..+..  +.++..
T Consensus        77 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~  152 (270)
T 1yde_A           77 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAI--GQAQAV  152 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHH--CCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccC--CCCCCc
Confidence            99999999999999986444567788999999999999999999999999999764  58999999988766  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---ch--hhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---KK--DWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---~~--~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++.....   ..  ..... .....|++|+++|+ |+|+.+.|
T Consensus       153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~p~~r~~~p~-dva~~v~~  230 (270)
T 1yde_A          153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIRE-GMLAQPLGRMGQPA-EVGAAAVF  230 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHH-HHHTSTTSSCBCHH-HHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHH-HhhcCCCCCCcCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999999864321   11  11111 12347999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++ ++++||++|.+|||+.+.
T Consensus       231 L~s~-~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          231 LASE-ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             HHHH-CTTCCSCEEEESTTTTSC
T ss_pred             Hccc-CCCcCCCEEEECCCeecc
Confidence            9997 789999999999998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-46  Score=323.11  Aligned_cols=248  Identities=25%  Similarity=0.328  Sum_probs=211.8

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHH-------
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGA-------   85 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------   85 (280)
                      |.+|++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++....+  .++.++.+|++ +.+       
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~-d~~~~~~~~~  117 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLS-NVATAPVSGA  117 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCS-SSCBCC----
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CeEEEEEeeCC-Cchhcccccc
Confidence            4458999999999999999999999999999999999 999888888888763332  36888999999 667       


Q ss_pred             ----------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCC--------------HHHHHHHHHhhhhHHHHHHH
Q 023555           86 ----------AIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLT--------------EEEWNHIMKTNLTGSWLVSK  141 (280)
Q Consensus        86 ----------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~  141 (280)
                                +++++++++.+.++++|+||||||+.. ..++.+.+              .++|++.+++|+.+++.+++
T Consensus       118 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  196 (328)
T 2qhx_A          118 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  196 (328)
T ss_dssp             ---CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence                      999999999999999999999999863 35666777              89999999999999999999


Q ss_pred             HHHHHHHhcCC-----CCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC
Q 023555          142 YVCIRMRDANQ-----EGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG  216 (280)
Q Consensus       142 ~~~~~~~~~~~-----~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~  216 (280)
                      +++|+|.+++.     .|+||++||..+..  +.+++..|++||+|++.|++.++.|++++||+||+|+||+++|++ ..
T Consensus       197 ~~~~~m~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~  273 (328)
T 2qhx_A          197 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM  273 (328)
T ss_dssp             HHHHHHHHSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS
T ss_pred             HHHHHHHhcCCcCCCCCcEEEEECchhhcc--CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc
Confidence            99999986431     58999999998876  667889999999999999999999999999999999999999998 43


Q ss_pred             ccchhhhhhhhhcCCCCC-CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          217 LMKKDWLNNVASRTYPLR-DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       217 ~~~~~~~~~~~~~~~p~~-~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .  +.....+ ....|++ ++.+|+ |+|+++.||+++.+.++||++|.+|||+.+.
T Consensus       274 ~--~~~~~~~-~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          274 P--PAVWEGH-RSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             C--HHHHHHH-HTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             c--HHHHHHH-HhhCCCCCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            2  2222222 2347888 999999 9999999999999999999999999998764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.2e-46  Score=317.13  Aligned_cols=245  Identities=27%  Similarity=0.438  Sum_probs=216.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+++|++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   79 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---GGSAFSIGANLE-SLHGVEALYSSL   79 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT---TCEEEEEECCTT-SHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc---CCceEEEecCcC-CHHHHHHHHHHH
Confidence            4789999999999999999999999999999885 67777888888887664   347888999999 789999999998


Q ss_pred             HHHcC------CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           95 WEAFG------RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        95 ~~~~g------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      .+.++      ++|++|||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  
T Consensus        80 ~~~~~~~~~~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~--  153 (255)
T 3icc_A           80 DNELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRI--  153 (255)
T ss_dssp             HHHHHHHHSSSCEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTS--
T ss_pred             HHHhcccccCCcccEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhcc--
Confidence            87764      499999999985 4556778899999999999999999999999999843   57999999998876  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|++++.+|+ |+|+++.
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  232 (255)
T 3icc_A          154 SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVE-DIADTAA  232 (255)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHH-HHHHHHH
T ss_pred             CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHH-HHHHHHH
Confidence            678889999999999999999999999999999999999999999887665554455555568999999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||+++.++++||++|.+|||+++
T Consensus       233 ~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          233 FLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHhCcccCCccCCEEEecCCeeC
Confidence            99999999999999999999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.6e-46  Score=318.34  Aligned_cols=252  Identities=18%  Similarity=0.284  Sum_probs=212.5

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++.+..+   ...++.+|++ +.+++++++++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~---~~~~~~~D~~-~~~~v~~~~~~   80 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG---SDIVLQCDVA-EDASIDTMFAE   80 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT---CCCEEECCTT-CHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC---CcEEEEccCC-CHHHHHHHHHH
Confidence            4889999999999  9999999999999999999999987 44444555544333   2367899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +.+.++++|+||||||....   ..++.+ .+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..+..  +
T Consensus        81 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~  155 (265)
T 1qsg_A           81 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAER--A  155 (265)
T ss_dssp             HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS--B
T ss_pred             HHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhcc--C
Confidence            99999999999999998632   134556 889999999999999999999999999863   48999999988776  5


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .+++..|++||++++.|+++++.+++++||+||+|+||+++|++.......+...+......|++++.+|+ |+|+.+.|
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~v~~  234 (265)
T 1qsg_A          156 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAF  234 (265)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            67888999999999999999999999999999999999999998764322122222222336889999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLPIFS  278 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~~~~  278 (280)
                      |+++.+.++||++|.+|||+.+.++..+|
T Consensus       235 l~s~~~~~~tG~~~~vdgG~~~~~~~~~~  263 (265)
T 1qsg_A          235 LCSDLSAGISGEVVHVDGGFSIAAMNELE  263 (265)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGBCSCCC-
T ss_pred             HhCchhcCccCCEEEECCCcCCCCcchhc
Confidence            99998999999999999999988777665

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=8.2e-46  Score=316.90  Aligned_cols=248  Identities=24%  Similarity=0.484  Sum_probs=210.8

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .+.+++++|++|||||++|||+++|++|+++|++|++++|+.+. ++...+++.+.   +.++.++.+|++ +.++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~   97 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKANVG-VVEDIVRM   97 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh---CCCeEEEEcCCC-CHHHHHHH
Confidence            35567999999999999999999999999999999999998654 55555666543   236788999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|+   +.|+||++||..+..  +.
T Consensus        98 ~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~--~~  171 (283)
T 1g0o_A           98 FEEAVKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE---IGGRLILMGSITGQA--KA  171 (283)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC---TTCEEEEECCGGGTC--SS
T ss_pred             HHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCeEEEEechhhcc--CC
Confidence            999999999999999999986 345677889999999999999999999999999992   268999999988765  33


Q ss_pred             C-CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----------chhhhhhhhhc--CCCCCCCC
Q 023555          171 P-GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----------KKDWLNNVASR--TYPLRDFG  237 (280)
Q Consensus       171 ~-~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----------~~~~~~~~~~~--~~p~~~~~  237 (280)
                      + +...|++||++++.|+++++.|++++||+||+|+||+++|++.....          ..+....+ ..  ..|+++++
T Consensus       172 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~r~~  250 (283)
T 1g0o_A          172 VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEY-AAVQWSPLRRVG  250 (283)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHH-HHHHSCTTCSCB
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHH-HhhcCCCCCCCc
Confidence            3 47899999999999999999999999999999999999999854321          11122222 22  47999999


Q ss_pred             CChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       238 ~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .|+ |+|+++.||+++.++++||++|.+|||+++
T Consensus       251 ~p~-dvA~~v~~l~s~~~~~itG~~i~vdgG~~~  283 (283)
T 1g0o_A          251 LPI-DIARVVCFLASNDGGWVTGKVIGIDGGACM  283 (283)
T ss_dssp             CHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CHH-HHHHHHHHHhCccccCcCCCEEEeCCCccC
Confidence            999 999999999999999999999999999753

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-46  Score=318.36  Aligned_cols=246  Identities=31%  Similarity=0.496  Sum_probs=208.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.      .++.++.+|++ +.++++++++++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~-~~~~v~~~~~~~   74 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVS-DPKAVEAVFAEA   74 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCC-CHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999888777655442      36788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+| ++  .|+||++||..+.   +.++..
T Consensus        75 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~---~~~~~~  147 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL---GAFGLA  147 (263)
T ss_dssp             HHHHSCCCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC---CHHHHH
T ss_pred             HHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc---CCCCcH
Confidence            99999999999999986 34567788999999999999999999999999999 43  6899999998875   335678


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++..... ...... .....|++++.+|+ |+|+.+.||+++.
T Consensus       148 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~-~~~~~p~~~~~~p~-dvA~~v~~l~s~~  224 (263)
T 2a4k_A          148 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP-PWAWEQ-EVGASPLGRAGRPE-EVAQAALFLLSEE  224 (263)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-HHHHHH-HHHTSTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC-HHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999999976542 222222 23347899999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccCCCCCCC
Q 023555          255 SEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      ++++||+++.+|||+.+...+.+
T Consensus       225 ~~~~tG~~i~vdgG~~~~~~~~~  247 (263)
T 2a4k_A          225 SAYITGQALYVDGGRSIVGPPGL  247 (263)
T ss_dssp             GTTCCSCEEEESTTTTTC-----
T ss_pred             ccCCcCCEEEECCCccccCCCCC
Confidence            99999999999999988765443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-46  Score=313.94  Aligned_cols=251  Identities=26%  Similarity=0.382  Sum_probs=205.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+...+...+..+..  +.++.++.+|++ +.++++++++++.
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~-~~~~v~~~~~~~~   80 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQADVT-KKEDLHKIVEEAM   80 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG--GGGEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEEecCC-CHHHHHHHHHHHH
Confidence            4668999999999999999999999999999999887655433333332222  347889999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCC-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVS-GAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      +.++++|+||||||.. ....++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||.......+.++..
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~  159 (264)
T 3i4f_A           81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRS  159 (264)
T ss_dssp             HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCH
T ss_pred             HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCc
Confidence            9999999999999942 2335677889999999999999999999999999998754 6899999997443223556778


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.......  .........|++++++|+ |+|+.+.||+++.
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~p~~r~~~~~-dva~~v~~l~s~~  236 (264)
T 3i4f_A          160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE--ARQLKEHNTPIGRSGTGE-DIARTISFLCEDD  236 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH--HHHC--------CCCCHH-HHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH--HHHHHhhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999998765432  223334457999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccCCC
Q 023555          255 SEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.++||++|.+|||++..-
T Consensus       237 ~~~itG~~i~vdGG~~~~~  255 (264)
T 3i4f_A          237 SDMITGTIIEVTGAVDVIH  255 (264)
T ss_dssp             GTTCCSCEEEESCSCCCCC
T ss_pred             cCCCCCcEEEEcCceeecc
Confidence            9999999999999998754

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-46  Score=317.24  Aligned_cols=255  Identities=25%  Similarity=0.399  Sum_probs=205.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++......+.++.++.+|++ +.++++++++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~   80 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT-TDAGQDEILSTT   80 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccC-CHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888887777432223447888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCC----CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc-ccCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDL----TEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQ  169 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~-~~~~~  169 (280)
                      .+.+|++|+||||||... ..++.+.    +.++|++.+++|+.+++.++++++|.|+++  +|+||++||..+ ..  +
T Consensus        81 ~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~--~  155 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLH--A  155 (278)
T ss_dssp             HHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTTSSSS--C
T ss_pred             HHHcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEeccccccc--C
Confidence            999999999999999863 3455666    899999999999999999999999999764  389999999887 65  5


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhh------hhhhhhcCCCCCCCCCChH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDW------LNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~------~~~~~~~~~p~~~~~~~~~  241 (280)
                      .++...|++||++++.|+++++.|++++||+||+|+||+++|++......  ...      .... ....|++++.+|+ 
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~-  233 (278)
T 1spx_A          156 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATM-KECVPAGVMGQPQ-  233 (278)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHH-HHHCTTSSCBCHH-
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHH-HhcCCCcCCCCHH-
Confidence            67888999999999999999999999999999999999999998653211  111      1222 2236889999999 


Q ss_pred             HHHHHHHHhhcCCCCc-ccccEEEeCCcccCCCCCCC
Q 023555          242 ALTSLVRYLVHDSSEY-VSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~-i~G~~i~vdgG~~~~~~~~~  277 (280)
                      |+|+.+.||+++...+ +||+++.+|||+.+......
T Consensus       234 dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~  270 (278)
T 1spx_A          234 DIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHC  270 (278)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----
T ss_pred             HHHHHHHHHcCccccCcccCcEEEECCCcccccCccc
Confidence            9999999999987776 99999999999987665443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=7.3e-46  Score=312.57  Aligned_cols=245  Identities=30%  Similarity=0.438  Sum_probs=210.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+  ++..+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~---~~~~~~~~~D~~-~~~~v~~~~~~~~   74 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH---GVKAVHHPADLS-DVAQIEALFALAE   74 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT---SCCEEEECCCTT-SHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc---CCceEEEeCCCC-CHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999876  4445555432   336788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...
T Consensus        75 ~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  150 (255)
T 2q2v_A           75 REFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLV--GSTGKAA  150 (255)
T ss_dssp             HHHSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhcc--CCCCchh
Confidence            9999999999999986 345667889999999999999999999999999998754 68999999998876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhh---h----hhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDW---L----NNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~---~----~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |++||++++.|+++++.|++++||+||+|+||+++|++......  ...   .    ..+.....|++++..|+ |+|++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~  229 (255)
T 2q2v_A          151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE-HLGEL  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHH-HHHHH
Confidence            99999999999999999999999999999999999998653221  111   1    11213447899999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++.++++||+.|.+|||+.+
T Consensus       230 ~~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          230 VLFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCCccCCCCCCEEEECCCccC
Confidence            9999999889999999999999865

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.2e-46  Score=313.86  Aligned_cols=241  Identities=24%  Similarity=0.369  Sum_probs=206.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+...++.++.+|++ +.++++++++++.
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT-DCTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT-CHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC-CHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999999999999988776443357889999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|+||||||+.. ..++ +.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++...
T Consensus        83 ~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  157 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKY--GFADGGI  157 (250)
T ss_dssp             HHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CCTTH
T ss_pred             HhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcC--CCCCCcc
Confidence            99999999999999863 3445 778999999999999999999999999998754 78999999998876  3455889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC-
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS-  254 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~-  254 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.....          ...|.+++.+|+ |+++.+.||+++. 
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~p~-dva~~v~~l~s~~~  226 (250)
T 3nyw_A          158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----------TPFKDEEMIQPD-DLLNTIRCLLNLSE  226 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----------CCSCGGGSBCHH-HHHHHHHHHHTSCT
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----------CCcccccCCCHH-HHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999865321          225677888998 9999999999954 


Q ss_pred             CCcccccEEEeCCcccCCC
Q 023555          255 SEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~~  273 (280)
                      ..+++|.+|.+|||.....
T Consensus       227 ~~~~~~~~i~vd~~~~~~~  245 (250)
T 3nyw_A          227 NVCIKDIVFEMKKSIIEGH  245 (250)
T ss_dssp             TEECCEEEEEEHHHHHC--
T ss_pred             ceEeeEEEEEeeccccccc
Confidence            5588889999999986544

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=8.6e-46  Score=315.00  Aligned_cols=246  Identities=30%  Similarity=0.458  Sum_probs=204.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~v~~~~~~~~   99 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES---GGEAVAIPGDVG-NAADIAAMFSAVD   99 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHHH
Confidence            568999999999999999999999999999776 77888888888877654   347889999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCCCeEEEEeccccccCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA--NQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.++++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|.+.  +..|+||++||..+... ..+++
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~~~~  178 (272)
T 4e3z_A          100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG-SATQY  178 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC-CTTTC
T ss_pred             HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC-CCCCc
Confidence            9999999999999987555677788999999999999999999999999999763  23689999999888652 22366


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++............ .....|++++..|+ |+|+++.||+++
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~e-dvA~~i~~l~s~  256 (272)
T 4e3z_A          179 VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE-MAPSVPMQRAGMPE-EVADAILYLLSP  256 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHH-HhhcCCcCCCcCHH-HHHHHHHHHhCC
Confidence            7899999999999999999999999999999999999998765322233222 33347899999999 999999999999


Q ss_pred             CCCcccccEEEeCCcc
Q 023555          254 SSEYVSGNIFIVDSGA  269 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~  269 (280)
                      .+.++||++|.+|||+
T Consensus       257 ~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          257 SASYVTGSILNVSGGR  272 (272)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             ccccccCCEEeecCCC
Confidence            9999999999999995

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=7.9e-47  Score=318.83  Aligned_cols=241  Identities=27%  Similarity=0.423  Sum_probs=194.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++..+   ++      +.++.++.+|++ +.++++++++.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~------~~~~~~~~~D~~-~~~~v~~~~~~   73 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA---DL------GDRARFAAADVT-DEAAVASALDL   73 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH---HT------CTTEEEEECCTT-CHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH---hc------CCceEEEECCCC-CHHHHHHHHHH
Confidence            357999999999999999999999999999999999997554322   22      236888999999 78999999998


Q ss_pred             HHHHcCCccEEEECCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-------CCCCeEEEEeccc
Q 023555           94 AWEAFGRIDALVNNAGVSGAV---KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-------NQEGSVINISSIA  163 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~g~vv~vsS~~  163 (280)
                      +.+ ++++|+||||||.....   .+..+.+.++|++.+++|+.+++.++++++|+|.+.       ++.|+||++||..
T Consensus        74 ~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tl3_A           74 AET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA  152 (257)
T ss_dssp             HHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred             HHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence            877 89999999999975321   122357899999999999999999999999999862       3478999999998


Q ss_pred             cccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChHH
Q 023555          164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPA  242 (280)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~  242 (280)
                      +..  +.+++..|++||+|++.|+++++.|++++||+||+|+||+++|++...... ... .......|+ +++.+|+ |
T Consensus       153 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~-~~~~~~~~~~~r~~~p~-d  227 (257)
T 3tl3_A          153 AFD--GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPE-EAR-ASLGKQVPHPSRLGNPD-E  227 (257)
T ss_dssp             --C--CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CH-HHH-HHHHHTSSSSCSCBCHH-H
T ss_pred             hcC--CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccH-HHH-HHHHhcCCCCCCccCHH-H
Confidence            876  556788999999999999999999999999999999999999999876432 222 223344777 9999999 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +|+++.||+++  .++||++|.+|||+++.
T Consensus       228 va~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          228 YGALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence            99999999986  79999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.7e-45  Score=309.16  Aligned_cols=238  Identities=34%  Similarity=0.514  Sum_probs=211.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+++++..+++..      ++.++.+|++ +.++++++++++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~-~~~~v~~~~~~~~   76 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVT-QPAQWKAAVDTAV   76 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------CceEEEecCC-CHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999888777666532      4778899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...
T Consensus        77 ~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  152 (260)
T 1nff_A           77 TAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLA--GTVACHG  152 (260)
T ss_dssp             HHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcC--CCCCchh
Confidence            9999999999999986 345677889999999999999999999999999998754 68999999998876  5677889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||++++.|+++++.|++++||+||+|+||++.|++.. ... +   .. . ..|++++.+|+ |+|+.+.||+++.+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~-~---~~-~-~~~~~~~~~~~-dvA~~v~~l~s~~~  224 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP-E---DI-F-QTALGRAAEPV-EVSNLVVYLASDES  224 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC-T---TC-S-CCSSSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch-h---hH-H-hCccCCCCCHH-HHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999999864 211 1   11 1 36888999998 99999999999988


Q ss_pred             CcccccEEEeCCcccCC
Q 023555          256 EYVSGNIFIVDSGATLP  272 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~  272 (280)
                      .+++|+.+.+|||+.+.
T Consensus       225 ~~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          225 SYSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             TTCCSCEEEESTTGGGS
T ss_pred             cCCcCCEEEECCCeecc
Confidence            99999999999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=3.3e-46  Score=317.93  Aligned_cols=238  Identities=19%  Similarity=0.330  Sum_probs=202.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-------HHHHHHHHHhhcCCCcceEEEEeccCCCHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKQSGSSVRAMAVELDVSANGAAI   87 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   87 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...   +.++.++.+|++ +.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v   77 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA---GGQGLALKCDIR-EEDQV   77 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH---TSEEEEEECCTT-CHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc---CCeEEEEeCCCC-CHHHH
Confidence            47899999999999999999999999999999999998653       56666666543   237889999999 78999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           88 ENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        88 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      +++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+...
T Consensus        78 ~~~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~  155 (274)
T 3e03_A           78 RAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNP  155 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcc-cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCC
Confidence            999999999999999999999986 445777889999999999999999999999999998754 789999999887652


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecC-cccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPG-LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      ...++...|++||+|+++|+++++.|++++||+||+|+|| .++|++.....           ..+..+..+|+ |+|+.
T Consensus       156 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~~~~~~~~~pe-dvA~~  223 (274)
T 3e03_A          156 AWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------GVDAAACRRPE-IMADA  223 (274)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTH-HHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------cccccccCCHH-HHHHH
Confidence            1145678899999999999999999999999999999999 69999873221           13445577898 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++.++++||++| +|||+..
T Consensus       224 v~~l~s~~~~~itG~~i-~~~g~~~  247 (274)
T 3e03_A          224 AHAVLTREAAGFHGQFL-IDDEVLA  247 (274)
T ss_dssp             HHHHHTSCCTTCCSCEE-EHHHHHH
T ss_pred             HHHHhCccccccCCeEE-EcCcchh
Confidence            99999999999999999 7777654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.1e-46  Score=314.56  Aligned_cols=248  Identities=22%  Similarity=0.341  Sum_probs=210.7

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+++ .++..+++.+..+   .+.++.+|++ +.+++++++++
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~D~~-~~~~v~~~~~~   79 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG---GALLFRADVT-QDEELDALFAG   79 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT---CCEEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC---CcEEEECCCC-CHHHHHHHHHH
Confidence            6889999999999  99999999999999999999999875 4444455544333   3678899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|++   +|+||++||..+..  +.
T Consensus        80 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~  154 (261)
T 2wyu_A           80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEK--VV  154 (261)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTS--BC
T ss_pred             HHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccC--CC
Confidence            99999999999999998632   245668899999999999999999999999999853   48999999988776  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||++++.|+++++.|++++||+||+|+||+++|++.......+..........|++++.+|+ |+|+.+.||
T Consensus       155 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~v~~l  233 (261)
T 2wyu_A          155 PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLFL  233 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            7788999999999999999999999999999999999999998654322122222223337899999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      +++.+.++||++|.+|||+.+.+.
T Consensus       234 ~s~~~~~~tG~~~~vdgG~~~~~~  257 (261)
T 2wyu_A          234 LSPLASGITGEVVYVDAGYHIMGM  257 (261)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBC-
T ss_pred             cChhhcCCCCCEEEECCCccccCC
Confidence            999899999999999999988764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=7.7e-46  Score=315.81  Aligned_cols=247  Identities=19%  Similarity=0.276  Sum_probs=211.0

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+   .+.++.+|++ +.+++++++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~D~~-~~~~v~~~~~~   77 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN---SPYVYELDVS-KEEHFKSLYNS   77 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT---CCCEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC---CcEEEEcCCC-CHHHHHHHHHH
Confidence            5889999999999  99999999999999999999999976 4444555544333   3678899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|++   +|+||++||..+..  +.
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~  152 (275)
T 2pd4_A           78 VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTK--YM  152 (275)
T ss_dssp             HHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS--BC
T ss_pred             HHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcC--CC
Confidence            99999999999999998633   246668899999999999999999999999999964   48999999988776  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|++.|+++++.+++++||+||+|+||+++|++.......+..........|++++.+|+ |+|+.+.||
T Consensus       153 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dva~~~~~l  231 (275)
T 2pd4_A          153 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGMYL  231 (275)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHH-HHHHHHHHH
Confidence            7888999999999999999999999999999999999999998765432222222222337899999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +++.+.++||+++.+|||+.+.+
T Consensus       232 ~s~~~~~~tG~~~~vdgg~~~~~  254 (275)
T 2pd4_A          232 LSSLSSGVSGEVHFVDAGYHVMG  254 (275)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBS
T ss_pred             hCccccCCCCCEEEECCCcccCC
Confidence            99989999999999999998743

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.2e-45  Score=313.03  Aligned_cols=245  Identities=24%  Similarity=0.371  Sum_probs=206.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCH----HHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANG----AAIEN   89 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~~~   89 (280)
                      .+|++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++.+..+  .++.++.+|++ +.    +++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~-~~~~~~~~~~~   83 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDLS-LSSSLLDCCED   83 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCS-SSTTHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC--CceEEEeccCC-CccccHHHHHH
Confidence            3578999999999999999999999999999999999 88888888888765422  36788999999 77    89999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-----
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTE-----------EEWNHIMKTNLTGSWLVSKYVCIRMRDANQE-----  153 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----  153 (280)
                      +++++.+.++++|+||||||+.. ..++.+.+.           ++|++.+++|+.+++.++++++|+|. ++ .     
T Consensus        84 ~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~  160 (276)
T 1mxh_A           84 IIDCSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSR  160 (276)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCC
Confidence            99999999999999999999863 356667777           99999999999999999999999996 33 4     


Q ss_pred             -CeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCC
Q 023555          154 -GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYP  232 (280)
Q Consensus       154 -g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p  232 (280)
                       |+||++||..+..  +.+++..|++||++++.|+++++.|++++||+||+|+||+++|+ . .. .......+. ...|
T Consensus       161 ~g~iv~isS~~~~~--~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~-~~~~~~~~~-~~~p  234 (276)
T 1mxh_A          161 NLSVVNLCDAMTDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AM-PQETQEEYR-RKVP  234 (276)
T ss_dssp             CEEEEEECCGGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SS-CHHHHHHHH-TTCT
T ss_pred             CcEEEEECchhhcC--CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cC-CHHHHHHHH-hcCC
Confidence             8999999998876  66788999999999999999999999999999999999999999 2 22 222222232 3478


Q ss_pred             CCC-CCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          233 LRD-FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       233 ~~~-~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++ +.+|+ |+|+.+.||+++.+.++||++|.+|||+++.
T Consensus       235 ~~r~~~~~~-dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          235 LGQSEASAA-QIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             TTSCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence            888 89998 9999999999998899999999999998764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-45  Score=308.96  Aligned_cols=238  Identities=21%  Similarity=0.309  Sum_probs=206.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.......+..+++|.+ +.++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~-~~~~~~~~~~   86 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA-TAQQYRELAA   86 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTC-CHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccC-CHHHHHHHHH
Confidence            334789999999999999999999999999999999999999999999988776543333444444448 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..  +.++
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  163 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRK--GRAN  163 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTS--CCTT
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcC--CCCC
Confidence            99999999999999999876667788899999999999999999999999999997644 78999999998876  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +..|++||+|++.|+++++.|+++ +||+||+|+||+++|++.....+.          .+..+...|+ |+|+.+.||+
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~-dva~~~~~l~  232 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD----------ENPLNNPAPE-DIMPVYLYLM  232 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT----------SCGGGSCCGG-GGTHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc----------cCccCCCCHH-HHHHHHHHHh
Confidence            899999999999999999999987 899999999999999986432211          1223456788 9999999999


Q ss_pred             cCCCCcccccEEEe
Q 023555          252 HDSSEYVSGNIFIV  265 (280)
Q Consensus       252 s~~~~~i~G~~i~v  265 (280)
                      +++++++||++|.+
T Consensus       233 s~~~~~itG~~i~~  246 (247)
T 3i1j_A          233 GPDSTGINGQALNA  246 (247)
T ss_dssp             SGGGTTCCSCEEEC
T ss_pred             CchhccccCeeecC
Confidence            99999999999986

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.2e-45  Score=308.79  Aligned_cols=238  Identities=25%  Similarity=0.401  Sum_probs=191.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+.         +.  .  .+..+.+|++ +.++++++++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~--~--~~~~~~~D~~-d~~~~~~~~~~~   68 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ--Y--PFATEVMDVA-DAAQVAQVCQRL   68 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC--C--SSEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc--C--CceEEEcCCC-CHHHHHHHHHHH
Confidence            36899999999999999999999999999999999998651         11  1  2677899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++..
T Consensus        69 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~  144 (250)
T 2fwm_X           69 LAETERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHT--PRIGMS  144 (250)
T ss_dssp             HHHCSCCCEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCTTCH
T ss_pred             HHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC--CCCCCc
Confidence            99999999999999986 345677889999999999999999999999999998754 68999999998876  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhc-------CCCCCCCCCChHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASR-------TYPLRDFGTTDPALTSL  246 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~-------~~p~~~~~~~~~~va~~  246 (280)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++...... ..........       ..|++++.+|+ |+|+.
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dvA~~  223 (250)
T 2fwm_X          145 AYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQ-EIANT  223 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHH-HHHHH
Confidence            999999999999999999999999999999999999998654321 1111101111       36888999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++.++++||++|.+|||+++
T Consensus       224 v~~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          224 ILFLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHhCccccCCCCCEEEECCCccc
Confidence            9999999999999999999999875

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.8e-45  Score=313.90  Aligned_cols=248  Identities=19%  Similarity=0.287  Sum_probs=210.1

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+   .+.++.+|++ +.+++++++++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~Dl~-~~~~v~~~~~~   92 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG---SDLVVKCDVS-LDEDIKNLKKF   92 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT---CCCEEECCTT-CHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC---CeEEEEcCCC-CHHHHHHHHHH
Confidence            4899999999999  99999999999999999999999875 4444555544333   3567899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|.++  +|+||++||..+..  +.
T Consensus        93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~  168 (285)
T 2p91_A           93 LEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEK--VV  168 (285)
T ss_dssp             HHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTS--BC
T ss_pred             HHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhcc--CC
Confidence            99999999999999998632   2456678999999999999999999999999999653  58999999988776  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|++.|+++++.+++++||+||+|+||+++|++.......+..........|++++.+|+ |+|+.+.||
T Consensus       169 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~~~~l  247 (285)
T 2p91_A          169 PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE-DVGDTAVFL  247 (285)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            7888999999999999999999999999999999999999998754322122222223336889999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +++.+.++||+++.+|||+.+..
T Consensus       248 ~s~~~~~~tG~~~~vdgg~~~~~  270 (285)
T 2p91_A          248 CSDWARAITGEVVHVDNGYHIMG  270 (285)
T ss_dssp             TSGGGTTCCSCEEEESTTGGGBS
T ss_pred             cCCcccCCCCCEEEECCCccccc
Confidence            99989999999999999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-45  Score=310.22  Aligned_cols=245  Identities=27%  Similarity=0.479  Sum_probs=193.9

Q ss_pred             CCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555            9 LDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus         9 ~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      .++.+..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      ++.+..+|++ +.++++
T Consensus         4 ~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~-~~~~~~   76 (249)
T 3f9i_A            4 HHHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD------NYTIEVCNLA-NKEECS   76 (249)
T ss_dssp             -----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS------SEEEEECCTT-SHHHHH
T ss_pred             CCccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc------CccEEEcCCC-CHHHHH
Confidence            344455689999999999999999999999999999999999999988888777632      6778899999 667776


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++++    .++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  
T Consensus        77 ~~~~----~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--  148 (249)
T 3f9i_A           77 NLIS----KTSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIA--  148 (249)
T ss_dssp             HHHH----TCSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC----
T ss_pred             HHHH----hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhcc--
Confidence            6655    4578999999999863 35566788899999999999999999999999998754 68999999998876  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      +.++...|++||+|++.|+++++.+++++||+||+|+||+++|++...... ..... .....|++++..|+ |+|+++.
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-dva~~~~  225 (249)
T 3f9i_A          149 GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE-KQREA-IVQKIPLGTYGIPE-DVAYAVA  225 (249)
T ss_dssp             CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH-HHHHH-HHHHCTTCSCBCHH-HHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH-HHHHH-HHhcCCCCCCcCHH-HHHHHHH
Confidence            668889999999999999999999999999999999999999999776532 22222 23347899999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||+++.+.++||++|.+|||+.+
T Consensus       226 ~l~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          226 FLASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHcCCccCCccCcEEEECCCEee
Confidence            99999999999999999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-45  Score=309.55  Aligned_cols=245  Identities=27%  Similarity=0.408  Sum_probs=199.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.   +.++.++.+|++ +.++++++++++.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-d~~~v~~~~~~~~~   77 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA---GGTALAQVLDVT-DRHSVAAFAQAAVD   77 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEcCCC-CHHHHHHHHHHHHH
Confidence            67999999999999999999999999999999999999999998888764   337888999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .+|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...|
T Consensus        78 ~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~--~~~~~~~Y  153 (264)
T 3tfo_A           78 TWGRIDVLVNNAGVM-PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALS--VVPTAAVY  153 (264)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcc--cCCCChhH
Confidence            999999999999986 456778899999999999999999999999999998754 79999999999877  66888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      ++||+|+++|+++++.|+ + ||+||+|+||+++|++..............   .......+|+ |+|+++.||+++...
T Consensus       154 ~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~---~~~~~~~~pe-dvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMD---TYRAIALQPA-DIARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHH-HHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHH---hhhccCCCHH-HHHHHHHHHhcCCcc
Confidence            999999999999999998 4 999999999999999976543322111100   1112246787 999999999999999


Q ss_pred             cccccEEEeCCcccCCCCC
Q 023555          257 YVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~~~~~  275 (280)
                      +++|+.+..++|+.+....
T Consensus       228 ~~~~~i~i~p~~~~~~~~~  246 (264)
T 3tfo_A          228 VDTTEITIRPTASGNAENL  246 (264)
T ss_dssp             EEEEEEEEEECC-------
T ss_pred             CccceEEEecCccccccCc
Confidence            9999999999998765543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=3.8e-46  Score=313.85  Aligned_cols=249  Identities=28%  Similarity=0.451  Sum_probs=196.2

Q ss_pred             CCCCCCCCCCCc--ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEe
Q 023555            1 MASQVSDCLDLE--PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL   78 (280)
Q Consensus         1 ~~~~~~~~~~~~--~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (280)
                      |+.....|-+..  +..++++|++|||||++|||++++++|+++|++|++++|+.++++              .+.++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~   66 (253)
T 2nm0_A            1 MGSSHHHHHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------------GFLAVKC   66 (253)
T ss_dssp             -------------------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEEC
T ss_pred             CCCcccccccCCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------------cceEEEe
Confidence            344444444432  344788999999999999999999999999999999999865432              2567899


Q ss_pred             ccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEE
Q 023555           79 DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVIN  158 (280)
Q Consensus        79 D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~  158 (280)
                      |++ +.++++++++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||+
T Consensus        67 Dl~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~  143 (253)
T 2nm0_A           67 DIT-DTEQVEQAYKEIEETHGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVL  143 (253)
T ss_dssp             CTT-SHHHHHHHHHHHHHHTCSCSEEEEECSCC-TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred             cCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEE
Confidence            999 78999999999999999999999999986 345667788999999999999999999999999998754 689999


Q ss_pred             EeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCC
Q 023555          159 ISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT  238 (280)
Q Consensus       159 vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (280)
                      +||..+..  +.++...|++||++++.|++.++.|++++||+||+|+||+++|++..... ...... .....|++++.+
T Consensus       144 isS~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~-~~~~~p~~~~~~  219 (253)
T 2nm0_A          144 ISSVVGLL--GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT-DEQRAN-IVSQVPLGRYAR  219 (253)
T ss_dssp             ECCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHH-HHTTCTTCSCBC
T ss_pred             ECchhhCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC-HHHHHH-HHhcCCCCCCcC
Confidence            99988765  44667899999999999999999999999999999999999999875432 111122 223468899999


Q ss_pred             ChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       239 ~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+ |+|+.+.||+++.+.++||++|.+|||+.+
T Consensus       220 p~-dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          220 PE-EIAATVRFLASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             HH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HH-HHHHHHHHHhCccccCCcCcEEEECCcccc
Confidence            99 999999999999999999999999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2e-45  Score=312.54  Aligned_cols=251  Identities=29%  Similarity=0.403  Sum_probs=191.9

Q ss_pred             CCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHH
Q 023555            8 CLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAI   87 (280)
Q Consensus         8 ~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   87 (280)
                      ..-+.+|.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++ +.+++
T Consensus        17 ~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~-d~~~v   89 (272)
T 4dyv_A           17 NLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG------DDALCVPTDVT-DPDSV   89 (272)
T ss_dssp             -----------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT------SCCEEEECCTT-SHHHH
T ss_pred             eeehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CCeEEEEecCC-CHHHH
Confidence            444556778999999999999999999999999999999999999998888877763      36788999999 78999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEecccccc
Q 023555           88 ENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATS  166 (280)
Q Consensus        88 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~~~  166 (280)
                      +++++++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|++++ +.|+||++||..+..
T Consensus        90 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  169 (272)
T 4dyv_A           90 RALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS  169 (272)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC
Confidence            9999999999999999999999875556788899999999999999999999999999998754 258999999998876


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.+......  .. .....|.+++.+|+ |+|++
T Consensus       170 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~-~~~~~~~~~~~~pe-dvA~~  243 (272)
T 4dyv_A          170 --PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV--PQ-ADLSIKVEPVMDVA-HVASA  243 (272)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHH-HHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc--hh-hhhcccccCCCCHH-HHHHH
Confidence              66788999999999999999999999999999999999999999976543221  11 11236788899999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||++.......++.....++..+
T Consensus       244 v~fL~s~~~~~~~~~i~i~~~~~~~  268 (272)
T 4dyv_A          244 VVYMASLPLDANVQFMTIMATKMPL  268 (272)
T ss_dssp             HHHHHHSCTTSCCCEEEEEEC----
T ss_pred             HHHHhCCCCcCccceEEEeccCccc
Confidence            9999997666655555555555444

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=4.6e-46  Score=316.23  Aligned_cols=243  Identities=19%  Similarity=0.273  Sum_probs=205.3

Q ss_pred             CCCCcEEEEecC--CChhHHHHHHHHHHhCCeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           16 QLDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        16 ~l~~k~vlItG~--~~giG~a~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|+.++ ++++.+++      +.++.++.+|++ +.++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~v~~~~~   76 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL------PAKAPLLELDVQ-NEEHLASLAG   76 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS------SSCCCEEECCTT-CHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc------CCCceEEEccCC-CHHHHHHHHH
Confidence            588999999999  9999999999999999999999998765 34433322      225778899999 7899999999


Q ss_pred             HHHHHcC---CccEEEECCCCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc
Q 023555           93 KAWEAFG---RIDALVNNAGVSGA----VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT  165 (280)
Q Consensus        93 ~~~~~~g---~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~  165 (280)
                      ++.+.+|   ++|+||||||....    ..++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||... 
T Consensus        77 ~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-  152 (269)
T 2h7i_A           77 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-  152 (269)
T ss_dssp             HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-
T ss_pred             HHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-
Confidence            9999999   99999999998632    346678899999999999999999999999999964   489999999765 


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----chhh------hhhhhhcCCCCC-
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----KKDW------LNNVASRTYPLR-  234 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----~~~~------~~~~~~~~~p~~-  234 (280)
                      .  +.+.+..|++||++++.|+++++.|++++||+||+|+||+++|++.....    .+..      ..+......|++ 
T Consensus       153 ~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  230 (269)
T 2h7i_A          153 R--AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGW  230 (269)
T ss_dssp             S--CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCC
T ss_pred             c--ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCccc
Confidence            3  55778899999999999999999999999999999999999999864321    1110      111222347898 


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++++|+ |+|+++.||+|+.++++||++|.+|||+++.
T Consensus       231 r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          231 NMKDAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             CTTCCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCCCHH-HHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            699999 9999999999999999999999999998763

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=7e-46  Score=322.91  Aligned_cols=247  Identities=28%  Similarity=0.394  Sum_probs=211.8

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC----------hhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----------VDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      .|.+++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++.+.   +.++.++.+|++ 
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-   96 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA---GGEAVADGSNVA-   96 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT---TCEEEEECCCTT-
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc---CCcEEEEECCCC-
Confidence            4557999999999999999999999999999999999998          67788888888664   347889999999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEE
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-----QEGSVI  157 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~vv  157 (280)
                      +.++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++++.|+|.+..     .+|+||
T Consensus        97 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV  175 (322)
T 3qlj_A           97 DWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRII  175 (322)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEE
Confidence            789999999999999999999999999873 45777899999999999999999999999999997532     137999


Q ss_pred             EEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCC
Q 023555          158 NISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG  237 (280)
Q Consensus       158 ~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (280)
                      ++||..+..  +.++...|++||+|++.|+++++.|++++||+||+|+|| +.|++.........     ....+..+..
T Consensus       176 ~isS~~~~~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~-----~~~~~~~~~~  247 (322)
T 3qlj_A          176 NTSSGAGLQ--GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM-----ATQDQDFDAM  247 (322)
T ss_dssp             EECCHHHHH--CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTT
T ss_pred             EEcCHHHcc--CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh-----hccccccCCC
Confidence            999998876  567889999999999999999999999999999999999 99998765433211     1112233556


Q ss_pred             CChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       238 ~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +|+ |+|+++.||+++.+.++||++|.+|||+....
T Consensus       248 ~pe-dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~  282 (322)
T 3qlj_A          248 APE-NVSPLVVWLGSAEARDVTGKVFEVEGGKIRVA  282 (322)
T ss_dssp             CGG-GTHHHHHHHTSGGGGGCCSCEEEEETTEEEEE
T ss_pred             CHH-HHHHHHHHHhCccccCCCCCEEEECCCccccC
Confidence            888 99999999999999999999999999997743

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.3e-44  Score=306.16  Aligned_cols=242  Identities=29%  Similarity=0.424  Sum_probs=204.2

Q ss_pred             CCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           10 DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      ...+|.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.+++++
T Consensus        20 ~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~v~~   95 (262)
T 3rkr_A           20 DDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA---GGEAESHACDLS-HSDAIAA   95 (262)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHH
T ss_pred             CcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh---CCceeEEEecCC-CHHHHHH
Confidence            335677899999999999999999999999999999999999999999988888764   337889999999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +++++.+.++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +
T Consensus        96 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~  172 (262)
T 3rkr_A           96 FATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKN--P  172 (262)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSC--C
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcC--C
Confidence            99999999999999999999854556778899999999999999999999999999998754 78999999998876  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .++...|++||+|++.|+++++.+++++||+||+|+||+++|++......          ..+..+...|+ |+|+++.|
T Consensus       173 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~-dvA~~v~~  241 (262)
T 3rkr_A          173 VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------KKSALGAIEPD-DIADVVAL  241 (262)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHH-HHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------ccccccCCCHH-HHHHHHHH
Confidence            67889999999999999999999999999999999999999998754321          13566777888 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcc
Q 023555          250 LVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~  269 (280)
                      |+++...+++|+.+..+.|.
T Consensus       242 l~s~~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          242 LATQADQSFISEVLVRPTLK  261 (262)
T ss_dssp             HHTCCTTCCEEEEEEECCCC
T ss_pred             HhcCccccccCcEEeccccC
Confidence            99999999999999988763

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4e-45  Score=320.35  Aligned_cols=241  Identities=25%  Similarity=0.350  Sum_probs=209.8

Q ss_pred             CCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-------HHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           10 DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      .++...+|+||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++.+.   +.++.++.+|++ 
T Consensus        36 m~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~---g~~~~~~~~Dv~-  111 (346)
T 3kvo_A           36 MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV---GGKALPCIVDVR-  111 (346)
T ss_dssp             CCCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT---TCEEEEEECCTT-
T ss_pred             cCccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc---CCeEEEEEccCC-
Confidence            4456678999999999999999999999999999999999998764       55666666553   347889999999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                      +.++++++++++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||.
T Consensus       112 d~~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~  189 (346)
T 3kvo_A          112 DEQQISAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPP  189 (346)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCH
Confidence            78999999999999999999999999986 446778899999999999999999999999999998754 7899999998


Q ss_pred             ccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCc-ccCccccCccchhhhhhhhhcCCCCCCCCCChH
Q 023555          163 AATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGL-FKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      .+......+++..|++||+|++.|+++++.|++ +||+||+|+||. ++|++.+..          ....|++++.+|+ 
T Consensus       190 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~----------~~~~~~~r~~~pe-  257 (346)
T 3kvo_A          190 LNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML----------GGPGIESQCRKVD-  257 (346)
T ss_dssp             CCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH----------CC--CGGGCBCTH-
T ss_pred             HHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh----------ccccccccCCCHH-
Confidence            887632367888999999999999999999999 899999999995 999875422          1224678888999 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      |+|+++.||+++ ++++||+++ +|||+.
T Consensus       258 dvA~~v~~L~s~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          258 IIADAAYSIFQK-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             HHHHHHHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred             HHHHHHHHHHhc-CCCCCceEE-ECCcEe
Confidence            999999999999 999999988 999964

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=7.9e-47  Score=329.76  Aligned_cols=251  Identities=22%  Similarity=0.310  Sum_probs=205.8

Q ss_pred             CCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChh---------HHHHHHHHHHhhcCCCcceEEEEeccCCCH--
Q 023555           18 DNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVD---------RLKSLCDEINKQSGSSVRAMAVELDVSANG--   84 (280)
Q Consensus        18 ~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--   84 (280)
                      ++|++|||||++  |||+++|++|+++|++|++++|++.         +++...+.+.........+..+.+|++ +.  
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~   79 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDAS-FDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTT-CSSG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhccccccccccccccc-ccch
Confidence            479999999986  9999999999999999998877652         222211111111111224678889988 45  


Q ss_pred             H------------------HHHHHHHHHHHHcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 023555           85 A------------------AIENSVQKAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCI  145 (280)
Q Consensus        85 ~------------------~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  145 (280)
                      +                  +++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.+++.++++++|
T Consensus        80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5                  899999999999999999999999742 346778899999999999999999999999999


Q ss_pred             HHHhcCCCCeEEEEeccccccCCCCCCCC-CChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCccchh--
Q 023555          146 RMRDANQEGSVINISSIAATSRGQLPGGV-AYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMKKD--  221 (280)
Q Consensus       146 ~~~~~~~~g~vv~vsS~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~~~~~--  221 (280)
                      +|+++   |+||++||..+..  +.+++. .|++||+|+.+|+++++.|+++ +||+||+|+||+++|++........  
T Consensus       160 ~m~~~---g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  234 (329)
T 3lt0_A          160 IMKPQ---SSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT  234 (329)
T ss_dssp             GEEEE---EEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----
T ss_pred             HHhhC---CeEEEEeCccccC--CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccc
Confidence            99763   8999999998876  667775 9999999999999999999998 8999999999999999976542100  


Q ss_pred             -----------------------------------------hhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccc
Q 023555          222 -----------------------------------------WLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSG  260 (280)
Q Consensus       222 -----------------------------------------~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G  260 (280)
                                                               ...+......|++|+++|+ |+|+++.||+|+.++++||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~fL~s~~a~~itG  313 (329)
T 3lt0_A          235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAITG  313 (329)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHSGGGTTCCS
T ss_pred             ccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHH-HHHHHHHHHhCchhccccC
Confidence                                                     0122233447999999999 9999999999999999999


Q ss_pred             cEEEeCCcccCCCCC
Q 023555          261 NIFIVDSGATLPGLP  275 (280)
Q Consensus       261 ~~i~vdgG~~~~~~~  275 (280)
                      ++|.+|||+++...|
T Consensus       314 ~~i~vdGG~~~~~~p  328 (329)
T 3lt0_A          314 QTIYVDNGLNIMFLP  328 (329)
T ss_dssp             CEEEESTTGGGCSSC
T ss_pred             cEEEEcCCeeEEecC
Confidence            999999999997665

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=7.5e-45  Score=303.54  Aligned_cols=236  Identities=27%  Similarity=0.454  Sum_probs=202.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.++.   .+++        .+..+.+|++ + ++++++++++.+.+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~--------~~~~~~~D~~-~-~~~~~~~~~~~~~~   68 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL--------GAVPLPTDLE-K-DDPKGLVKRALEAL   68 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH--------TCEEEECCTT-T-SCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh--------CcEEEecCCc-h-HHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999997652   2232        1567899999 6 88999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      +++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+......++...|++
T Consensus        69 g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~  146 (239)
T 2ekp_A           69 GGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTT  146 (239)
T ss_dssp             TSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHH
Confidence            9999999999986 345677889999999999999999999999999998754 68999999988876222267889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      ||++++.|+++++.|++++||+||+|+||+++|++..... .++... ......|++++.+|+ |+|+.+.||+++.+++
T Consensus       147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~-dvA~~~~~l~s~~~~~  224 (239)
T 2ekp_A          147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYE-PITARIPMGRWARPE-EIARVAAVLCGDEAEY  224 (239)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHH-HHHTTCTTSSCBCHH-HHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHH-HHHhcCCCCCCcCHH-HHHHHHHHHcCchhcC
Confidence            9999999999999999999999999999999999865432 122222 223447899999999 9999999999998999


Q ss_pred             ccccEEEeCCcccC
Q 023555          258 VSGNIFIVDSGATL  271 (280)
Q Consensus       258 i~G~~i~vdgG~~~  271 (280)
                      +||+++.+|||+.+
T Consensus       225 ~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          225 LTGQAVAVDGGFLA  238 (239)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CCCCEEEECCCccc
Confidence            99999999999764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=2.9e-45  Score=307.54  Aligned_cols=236  Identities=27%  Similarity=0.460  Sum_probs=198.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+++++              +..+.+|++ +.++++++++++
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~D~~-~~~~~~~~~~~~   75 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------------LFGVEVDVT-DSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------------SEEEECCTT-CHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------------hcCeeccCC-CHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998654321              113789999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++..
T Consensus        76 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  151 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLW--GIGNQA  151 (247)
T ss_dssp             HHHHSSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------CCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhcc--CCCCCh
Confidence            99999999999999986 445677889999999999999999999999999998754 68999999988776  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++..... ...... .....|++++.+|+ |+|+.+.||+++.
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~-~~~~~p~~~~~~~~-dvA~~~~~l~s~~  228 (247)
T 1uzm_A          152 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD-ERIQQG-ALQFIPAKRVGTPA-EVAGVVSFLASED  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-HHHHHH-HGGGCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC-HHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999865432 222222 23346889999999 9999999999998


Q ss_pred             CCcccccEEEeCCcccCC
Q 023555          255 SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~  272 (280)
                      +.+++|++|.+|||+.+.
T Consensus       229 ~~~~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          229 ASYISGAVIPVDGGMGMG  246 (247)
T ss_dssp             GTTCCSCEEEESTTTTC-
T ss_pred             ccCCcCCEEEECCCcccC
Confidence            899999999999998753

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=9.1e-45  Score=310.08  Aligned_cols=247  Identities=25%  Similarity=0.412  Sum_probs=211.6

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +..++++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.      .++.++.+|++ +.++++++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~-~~~~v~~~   94 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG------NRAEFVSTNVT-SEDSVLAA   94 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTT-CHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEcCCC-CHHHHHHH
Confidence            345668999999999999999999999999999999999999999888877762      36889999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCC-----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEe
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSP-----LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-----NQEGSVINIS  160 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~vv~vs  160 (280)
                      ++++ +.++++|++|||++.......+     .+.+.++|++.+++|+.+++.+++++++.|.+.     ++.|+||++|
T Consensus        95 ~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  173 (281)
T 3ppi_A           95 IEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTA  173 (281)
T ss_dssp             HHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEEC
T ss_pred             HHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEe
Confidence            9999 8889999999994433333332     367899999999999999999999999999761     3468999999


Q ss_pred             ccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCC
Q 023555          161 SIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTT  239 (280)
Q Consensus       161 S~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~  239 (280)
                      |..+..  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++...... +....+. ...|+ +++.+|
T Consensus       174 S~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~-~~~~~~~~~~~p  249 (281)
T 3ppi_A          174 SIAGYE--GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE-EALAKFA-ANIPFPKRLGTP  249 (281)
T ss_dssp             CGGGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH-HHHHHHH-HTCCSSSSCBCH
T ss_pred             cccccC--CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH-HHHHHHH-hcCCCCCCCCCH
Confidence            999877  668889999999999999999999999999999999999999999876533 2333333 33676 889999


Q ss_pred             hHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       240 ~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      + |+|+.+.||+++  .++||++|.+|||+.+.
T Consensus       250 e-dvA~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          250 D-EFADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             H-HHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             H-HHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            9 999999999984  69999999999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3.8e-45  Score=309.99  Aligned_cols=247  Identities=24%  Similarity=0.368  Sum_probs=211.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..         ..++.++.+|++ +.++++++++++.
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dv~-d~~~v~~~~~~~~   82 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---------LPNTLCAQVDVT-DKYTFDTAITRAE   82 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC---------CTTEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh---------cCCceEEEecCC-CHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987655421         126788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...
T Consensus        83 ~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~--~~~~~~~  158 (266)
T 3p19_A           83 KIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKK--TFPDHAA  158 (266)
T ss_dssp             HHHCSEEEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCTTCHH
T ss_pred             HHCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCC--CCCCCch
Confidence            9999999999999986 456788899999999999999999999999999998755 68999999999876  6688899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++..................|+++++.|+ |+|+++.||++...
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~av~~l~~~~~  237 (266)
T 3p19_A          159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAAD-DVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHH-HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHH-HHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999876544333332332235889999999 99999999999999


Q ss_pred             CcccccEEEeCCcccCCCCCCC
Q 023555          256 EYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      ..++++.+..+.++........
T Consensus       238 ~~~~~~i~i~p~~~~~~~~~~~  259 (266)
T 3p19_A          238 NVCIREIALAPTKQQPKLAAAL  259 (266)
T ss_dssp             TEEEEEEEEEETTCCC------
T ss_pred             CccceeeEEecCCCCCccchhh
Confidence            9999999999988877665443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=8.3e-45  Score=307.62  Aligned_cols=237  Identities=26%  Similarity=0.485  Sum_probs=206.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+.+.              +.++.++.+|++ +.+++++++++
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~-~~~~v~~~~~~   67 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVT-NPDQVKASIDH   67 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTT-CHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCC-CHHHHHHHHHH
Confidence            346889999999999999999999999999999999998654              125778899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++.
T Consensus        68 ~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~  143 (264)
T 2dtx_A           68 IFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASI--ITKNA  143 (264)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTS--CCTTB
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhcc--CCCCc
Confidence            999999999999999986 345677889999999999999999999999999997644 68999999998876  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc------ch----hhhhhhhhcCCCCCCCCCChHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM------KK----DWLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~------~~----~~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      ..|++||++++.|+++++.|++++ |+||+|+||+++|++.....      ..    +.... .....|++++..|+ |+
T Consensus       144 ~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~p~-dv  220 (264)
T 2dtx_A          144 SAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISE-WGHEHPMQRIGKPQ-EV  220 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHH-HHHHSTTSSCBCHH-HH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHH-HHhcCCCCCCcCHH-HH
Confidence            899999999999999999999988 99999999999999865431      11    11222 22336889999999 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++.||+++.+++++|+.+.+|||+.+.
T Consensus       221 A~~v~~l~s~~~~~~tG~~i~vdGG~~~~  249 (264)
T 2dtx_A          221 ASAVAFLASREASFITGTCLYVDGGLSIR  249 (264)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhCchhcCCCCcEEEECCCcccC
Confidence            99999999998999999999999998753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-45  Score=307.28  Aligned_cols=238  Identities=28%  Similarity=0.462  Sum_probs=200.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+++++.. ++       .++.++.+|++ +.++++    ++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-------~~~~~~~~D~~-~~~~~~----~~   68 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-------PGIQTRVLDVT-KKKQID----QF   68 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-------TTEEEEECCTT-CHHHHH----HH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-------cCceEEEeeCC-CHHHHH----HH
Confidence            4688999999999999999999999999999999999987665433 21       15778899999 666666    55


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC-CC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP-GG  173 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~-~~  173 (280)
                      .+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.+ +.
T Consensus        69 ~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  144 (246)
T 2ag5_A           69 ANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV--KGVVNR  144 (246)
T ss_dssp             HHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT--BCCTTB
T ss_pred             HHHhCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCc--CCCCCC
Confidence            566789999999999863 35667889999999999999999999999999998754 68999999988765  445 77


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-----hhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      ..|++||++++.|+++++.|++++||+||+|+||+++|++......     ......+ ....|++++.+|+ |+|+.+.
T Consensus       145 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dvA~~v~  222 (246)
T 2ag5_A          145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDF-LKRQKTGRFATAE-EIAMLCV  222 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHH-HHTCTTSSCEEHH-HHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHH-HhcCCCCCCCCHH-HHHHHHH
Confidence            8999999999999999999999999999999999999998643111     1222222 2346889999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ||+++.++++||++|.+|||+++
T Consensus       223 ~l~s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          223 YLASDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            99999999999999999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.5e-44  Score=304.11  Aligned_cols=238  Identities=19%  Similarity=0.189  Sum_probs=193.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~-~~~~v~~~~~~~   78 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA---GGRIVARSLDAR-NEDEVTAFLNAA   78 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECcCC-CHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999999999999888764   337889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+. +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++..
T Consensus        79 ~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  153 (252)
T 3h7a_A           79 DAH-APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLR--GGSGFA  153 (252)
T ss_dssp             HHH-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTC--CCTTCH
T ss_pred             Hhh-CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcC--CCCCCc
Confidence            999 99999999999864 56777899999999999999999999999999998755 68999999998877  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEE-EEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRV-NSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~v-n~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|++||+|+++|+++++.|++++||+| |+|+||+++|++........ . .......|.+ +.+|+ |+|+.+.||+++
T Consensus       154 ~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~-~-~~~~~~~~~~-~~~pe-dvA~~~~~l~s~  229 (252)
T 3h7a_A          154 AFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM-F-GKDALANPDL-LMPPA-AVAGAYWQLYQQ  229 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHH-HHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh-h-hhhhhcCCcc-CCCHH-HHHHHHHHHHhC
Confidence            999999999999999999999999999 99999999999987543221 1 1222335776 88898 999999999998


Q ss_pred             CCCcccccEEEe
Q 023555          254 SSEYVSGNIFIV  265 (280)
Q Consensus       254 ~~~~i~G~~i~v  265 (280)
                      ...+++|++...
T Consensus       230 ~~~~~~~~i~~~  241 (252)
T 3h7a_A          230 PKSAWTFEMEIR  241 (252)
T ss_dssp             CGGGBCSEEEEB
T ss_pred             chhcceeeEEee
Confidence            888999986554

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.6e-44  Score=303.82  Aligned_cols=249  Identities=32%  Similarity=0.526  Sum_probs=215.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++.+.   +.++.++.+|++ +.+++++++++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~~   78 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVT-VESDVINLVQS   78 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTT-SHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---CCceEEEECCCC-CHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 777787777777543   236788999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..  +.++.
T Consensus        79 ~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~  155 (261)
T 1gee_A           79 AIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLF  155 (261)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC--CCCCc
Confidence            999999999999999986 335566789999999999999999999999999998754368999999988766  56788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ..|++||++++.|++.++.+++++||+||+|+||++.|++...... +..... .....|++++.+|+ |+|+.+.||++
T Consensus       156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~  233 (261)
T 1gee_A          156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD-VESMIPMGYIGEPE-EIAAVAAWLAS  233 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHH-HHTTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHH-HHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            8999999999999999999999999999999999999998754321 222222 23346888999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCC
Q 023555          253 DSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.+.+++|+++.+|||+++.
T Consensus       234 ~~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          234 SEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             ccccCCCCcEEEEcCCcccC
Confidence            88899999999999998764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=7.4e-44  Score=300.82  Aligned_cols=250  Identities=27%  Similarity=0.444  Sum_probs=215.9

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++
T Consensus         7 ~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~~~~   82 (260)
T 3awd_A            7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME---GHDVSSVVMDVT-NTESVQNAVR   82 (260)
T ss_dssp             GGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEecCC-CHHHHHHHHH
Confidence            345789999999999999999999999999999999999998888877777653   236888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.+.
T Consensus        83 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~  159 (260)
T 3awd_A           83 SVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLI--VNRP  159 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCSS
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcc--cCCC
Confidence            99999999999999999864356777889999999999999999999999999998754 68999999988765  3344


Q ss_pred             C--CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc-CccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          173 G--VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE-GLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       173 ~--~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .  ..|++||++++.|++.++.+++++||+|++|+||+++|++.. ......+...+. ...|++++..|+ |+|+.+.+
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-dva~~~~~  237 (260)
T 3awd_A          160 QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWI-AGTPMGRVGQPD-EVASVVQF  237 (260)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHH-HTCTTSSCBCHH-HHHHHHHH
T ss_pred             CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHH-hcCCcCCCCCHH-HHHHHHHH
Confidence            4  789999999999999999999999999999999999999875 222222333332 346889999998 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+++...+++|+++.+|||+.+
T Consensus       238 l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          238 LASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTT
T ss_pred             HhCchhccCCCcEEEECCceec
Confidence            9998888999999999999753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-44  Score=309.60  Aligned_cols=243  Identities=25%  Similarity=0.353  Sum_probs=198.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..+  ..+.++.+|++ +.+++++++++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~-d~~~v~~~~~~  104 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG--NIVRAVVCDVG-DPDQVAALFAA  104 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CeEEEEEcCCC-CHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999999988888866543  23578999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+++ +.|+||++||..+..  +.++
T Consensus       105 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~~  182 (281)
T 4dry_A          105 VRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT--PRPN  182 (281)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC--CCTT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC--CCCC
Confidence            9999999999999999865556788899999999999999999999999999998754 368999999998876  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++........  .+ .....|.+++.+|+ |+|+++.||++
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~-~~~~~~~~~~~~pe-dvA~~v~fL~s  258 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV--LQ-ANGEVAAEPTIPIE-HIAEAVVYMAS  258 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE--EC-TTSCEEECCCBCHH-HHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh--hh-hhhcccccCCCCHH-HHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999976543211  11 11235677888998 99999999999


Q ss_pred             CCCC-cccccEEEe
Q 023555          253 DSSE-YVSGNIFIV  265 (280)
Q Consensus       253 ~~~~-~i~G~~i~v  265 (280)
                      .... .+++.++..
T Consensus       259 ~~~~~~i~~~~i~p  272 (281)
T 4dry_A          259 LPLSANVLTMTVMA  272 (281)
T ss_dssp             SCTTEEEEEEEEEE
T ss_pred             CCccCccccEEEEe
Confidence            6554 555544433

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.6e-44  Score=304.76  Aligned_cols=250  Identities=27%  Similarity=0.447  Sum_probs=193.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.   +.++.++.+|++ +.+++++++++
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~   84 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK---GFQVTGSVCDAS-LRPEREKLMQT   84 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-SHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeeEEEECCCC-CHHHHHHHHHH
Confidence            34789999999999999999999999999999999999998888888777653   236788999999 78999999999


Q ss_pred             HHHHc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.+.+ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++.+ .++||++||..+..  +.++
T Consensus        85 ~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  160 (266)
T 1xq1_A           85 VSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV--SASV  160 (266)
T ss_dssp             HHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------
T ss_pred             HHHHhCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcc--CCCC
Confidence            99998 8999999999986 345667889999999999999999999999999998754 68999999988766  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||++++.|+++++.+++++||+||+|+||++.|++........+... .....|++++..|+ |+|+.+.||++
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~  238 (266)
T 1xq1_A          161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKV-VISRKPLGRFGEPE-EVSSLVAFLCM  238 (266)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGG-GGHHHHHHHTS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            88999999999999999999999999999999999999998765432222222 22336888999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCCC
Q 023555          253 DSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +.+.+++|+++.+|||+.+.+
T Consensus       239 ~~~~~~~G~~~~v~gG~~~~~  259 (266)
T 1xq1_A          239 PAASYITGQTICVDGGLTVNG  259 (266)
T ss_dssp             GGGTTCCSCEEECCCCEEETT
T ss_pred             ccccCccCcEEEEcCCccccc
Confidence            888999999999999998754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=7e-44  Score=299.43  Aligned_cols=247  Identities=26%  Similarity=0.429  Sum_probs=214.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...    .++.++.+|++ +.++++++++++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~-~~~~~~~~~~~~   76 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSS-DEDGWTKLFDAT   76 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc----CceEEEECCCC-CHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988887776666321    36888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++.+.+++||++||..+..  +.++..
T Consensus        77 ~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~  153 (251)
T 1zk4_A           77 EKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLG  153 (251)
T ss_dssp             HHHHSSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCH
T ss_pred             HHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc--CCCCCc
Confidence            99999999999999986 445677889999999999999999999999999998754238999999988776  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          175 AYASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      .|++||++++.|+++++.++.  ++||++++|+||++.|++....... ..........|++++..|+ |+|+.+.||++
T Consensus       154 ~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~  231 (251)
T 1zk4_A          154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA-EEAMSQRTKTPMGHIGEPN-DIAYICVYLAS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH-HHHHTSTTTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             cchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCch-hhhHHHhhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            999999999999999999998  8899999999999999987654322 2222223346888999998 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      +...+++|+++.+|||+++
T Consensus       232 ~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          232 NESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             cccccccCcEEEECCCccC
Confidence            8888999999999999875

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=7.3e-45  Score=304.54  Aligned_cols=235  Identities=19%  Similarity=0.209  Sum_probs=198.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEE-e--cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAA-A--RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.+++++..+++ .    +.       |+. +.++++++++++.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~----~~-------~~~-~~~~v~~~~~~~~   67 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P----GT-------IAL-AEQKPERLVDATL   67 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T----TE-------EEC-CCCCGGGHHHHHG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C----CC-------ccc-CHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9988877766554 1    11       222 3456788999999


Q ss_pred             HHcCCccEEEECCCCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAV--KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.++++|+||||||.....  .++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++.
T Consensus        68 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~  144 (244)
T 1zmo_A           68 QHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKK--PLAYN  144 (244)
T ss_dssp             GGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCTTC
T ss_pred             HHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCC--CCCCc
Confidence            9999999999999986331  5778899999999999999999999999999998754 68999999998876  66788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc---cCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT---EGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.   .....++....+.....|++++.+|+ |+|+.+.||
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-~vA~~v~~l  223 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPD-EMGALITFL  223 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHH-HHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHH-HHHHHHHHH
Confidence            99999999999999999999999999999999999999987   43221122222222137899999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCccc
Q 023555          251 VHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +++.+.++||++|.+|||++
T Consensus       224 ~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HTTTTGGGTTCEEEESTTCC
T ss_pred             cCccccCccCCEEEeCCCCC
Confidence            99999999999999999974

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.1e-45  Score=309.41  Aligned_cols=232  Identities=23%  Similarity=0.341  Sum_probs=200.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHH-hCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .++|++|||||++|||+++|++|++ .|++|++++|+++.             ....+.++.+|++ +.++++++++.+.
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-------------~~~~~~~~~~Dv~-~~~~v~~~~~~~~   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-------------SAENLKFIKADLT-KQQDITNVLDIIK   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-------------CCTTEEEEECCTT-CHHHHHHHHHHTT
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-------------ccccceEEecCcC-CHHHHHHHHHHHH
Confidence            4689999999999999999999999 78999999997641             1125678999999 7899999996553


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                        ++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +.++...
T Consensus        68 --~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~--~~~~~~~  139 (244)
T 4e4y_A           68 --NVSFDGIFLNAGIL-IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQCFI--AKPNSFA  139 (244)
T ss_dssp             --TCCEEEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCGGGTC--CCTTBHH
T ss_pred             --hCCCCEEEECCccC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCHHHcc--CCCCCch
Confidence              78999999999986 3467888999999999999999999999999999865   38999999998876  6688899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh---------hhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD---------WLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~---------~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++........         ..........|++++.+|+ |+|++
T Consensus       140 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~  218 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQ-EIAEL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHH-HHHHH
Confidence            9999999999999999999999999999999999999876442211         1223344558999999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +.||+++.+.++||++|.+|||+++
T Consensus       219 v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          219 VIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhcCccccccCCeEeECCCccC
Confidence            9999999999999999999999975

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-43  Score=304.08  Aligned_cols=249  Identities=31%  Similarity=0.505  Sum_probs=213.7

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ...+++++|++|||||++|||+++++.|+++|++|++++|+.++++++.+++.+.   +.++.++.+|++ +.+++++++
T Consensus        37 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-d~~~v~~~~  112 (285)
T 2c07_A           37 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVS-KKEEISEVI  112 (285)
T ss_dssp             CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---TCCEEEEECCTT-CHHHHHHHH
T ss_pred             cccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCceeEEECCCC-CHHHHHHHH
Confidence            3456789999999999999999999999999999999999988888887777543   336888999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+.+ .++||++||..+..  +.+
T Consensus       113 ~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~  188 (285)
T 2c07_A          113 NKILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT--GNV  188 (285)
T ss_dssp             HHHHHHCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCT
T ss_pred             HHHHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc--CCC
Confidence            99999999999999999986 445677889999999999999999999999999998654 68999999988766  557


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +...|++||++++.|+++++.+++++||+||+|+||+++|++..... ..... ......|.+++.+|+ |+|+.+.||+
T Consensus       189 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~-~~~~~~~~~~~~~~~-dvA~~~~~l~  265 (285)
T 2c07_A          189 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-EQIKK-NIISNIPAGRMGTPE-EVANLACFLS  265 (285)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-HHHHH-HHHTTCTTSSCBCHH-HHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-HHHHH-HHHhhCCCCCCCCHH-HHHHHHHHHh
Confidence            88899999999999999999999999999999999999999876532 22222 223347888999998 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccC
Q 023555          252 HDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++.+.+++|+++.+|||+.+
T Consensus       266 ~~~~~~~~G~~i~v~gG~~~  285 (285)
T 2c07_A          266 SDKSGYINGRVFVIDGGLSP  285 (285)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CCCcCCCCCCEEEeCCCccC
Confidence            98889999999999999863

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=9.3e-44  Score=299.18  Aligned_cols=246  Identities=25%  Similarity=0.454  Sum_probs=211.6

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcce-EEEEeccCCCHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA-MAVELDVSANGAAIENS   90 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~   90 (280)
                      +.++++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.      .++ .++.+|++ +.++++++
T Consensus         4 ~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~   76 (254)
T 2wsb_A            4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG------AAVAARIVADVT-DAEAMTAA   76 (254)
T ss_dssp             TTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEEECCTT-CHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceeEEEEecC-CHHHHHHH
Confidence            34567999999999999999999999999999999999999988877776662      255 78899999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+ ++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..  +.
T Consensus        77 ~~~~~~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~  151 (254)
T 2wsb_A           77 AAEAEA-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTI--VN  151 (254)
T ss_dssp             HHHHHH-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CC
T ss_pred             HHHHHh-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhcc--CC
Confidence            999988 899999999999863 35667889999999999999999999999999998754 68999999988765  34


Q ss_pred             CCC--CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          171 PGG--VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       171 ~~~--~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      +..  ..|++||++++.+++.++.+++++||++++|+||++.|++...... ......+ ....|++++.+|+ |+|+.+
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dva~~~  229 (254)
T 2wsb_A          152 RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETW-LDMTPMGRCGEPS-EIAAAA  229 (254)
T ss_dssp             SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHH-HHTSTTSSCBCHH-HHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHH-HhcCCCCCCCCHH-HHHHHH
Confidence            555  7899999999999999999999999999999999999998653321 1222222 2346888999999 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .||+++...+++|+++.+|||+.+
T Consensus       230 ~~l~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          230 LFLASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCcccccccCCEEEECCCEec
Confidence            999998889999999999999763

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-44  Score=301.44  Aligned_cols=252  Identities=28%  Similarity=0.427  Sum_probs=212.9

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+..+  .++.++.+|++ +.++++++++
T Consensus         8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~-~~~~~~~~~~   84 (265)
T 1h5q_A            8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQCDVS-NTDIVTKTIQ   84 (265)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT--CCEEEEECCTT-CHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC--CeeEEEEeeCC-CHHHHHHHHH
Confidence            44579999999999999999999999999999999999987666665666654332  36788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC--
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--  170 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~--  170 (280)
                      ++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+....+.  
T Consensus        85 ~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  163 (265)
T 1h5q_A           85 QIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  163 (265)
T ss_dssp             HHHHHSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHHHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc
Confidence            9999999999999999986 3456677899999999999999999999999999987654589999999877542110  


Q ss_pred             ---CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          171 ---PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       171 ---~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                         .+...|++||++++.|++.++.+++++||+||+|+||++.|++..... +... .......|++++.+|+ |+|+.+
T Consensus       164 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-dva~~~  240 (265)
T 1h5q_A          164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-KKIR-DHQASNIPLNRFAQPE-EMTGQA  240 (265)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-HHHH-HHHHHTCTTSSCBCGG-GGHHHH
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc-hhHH-HHHHhcCcccCCCCHH-HHHHHH
Confidence               126789999999999999999999999999999999999999876542 2222 2223347889999999 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .||+++.+++++|+.+.+|||+.+
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HhhccCchhcCcCcEEEecCCEeC
Confidence            999999889999999999999864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.5e-43  Score=297.26  Aligned_cols=245  Identities=27%  Similarity=0.461  Sum_probs=211.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.  .+.++.++.+|++ +.++++++++++.+.
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~-~~~~~~~~~~~~~~~   77 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA--YADKVLRVRADVA-DEGDVNAAIAATMEQ   77 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT--TGGGEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCC-CHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999998888777766222  1346888999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCC---CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           98 FGRIDALVNNAGVSGAVKS---PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      ++++|+||||||... ..+   +.+.+.++|++.+++|+.+++.++++++|.|++.+ .++||++||..+..  +.++..
T Consensus        78 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~  153 (250)
T 2cfc_A           78 FGAIDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLV--AFPGRS  153 (250)
T ss_dssp             HSCCCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCH
T ss_pred             hCCCCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc--CCCCch
Confidence            999999999999863 233   66788999999999999999999999999998754 68999999988876  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC-ccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG-LMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|++||++++.|+++++.+++++||+|++|+||++.|++... .....+... .....|++++..|+ |+|+.+.||+++
T Consensus       154 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~~  231 (250)
T 2cfc_A          154 AYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQ-VLARIPQKEIGTAA-QVADAVMFLAGE  231 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHH-HHTTCTTCSCBCHH-HHHHHHHHHHST
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            999999999999999999999999999999999999998654 211222222 23347889999999 999999999999


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      ...+++|+++.+|||+++
T Consensus       232 ~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          232 DATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             TCTTCCSCEEEESTTGGG
T ss_pred             hhhcccCCEEEECCceec
Confidence            899999999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.3e-43  Score=294.98  Aligned_cols=238  Identities=28%  Similarity=0.460  Sum_probs=205.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.+.   +.++.++.+|++ +.++++++++++.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-~~~~~~~~~~~~~   79 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA---GAKVHVLELDVA-DRQGVDAAVASTV   79 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999888888887653   236888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++  |+||++||..+..  +.++...
T Consensus        80 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~--~~~~~~~  154 (247)
T 2jah_A           80 EALGGLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRV--NVRNAAV  154 (247)
T ss_dssp             HHHSCCSEEEECCCCC-CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTC--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcC--CCCCCcH
Confidence            9999999999999986 446778899999999999999999999999999998653  8999999998876  5678889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCC--CCChHHHHHHHHHhhcC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDF--GTTDPALTSLVRYLVHD  253 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~va~~~~~l~s~  253 (280)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++........ ....... .| +++  .+|+ |+|+.+.||+++
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~-~~-~~~~~~~pe-dvA~~v~~l~s~  230 (247)
T 2jah_A          155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQ-RI-SQIRKLQAQ-DIAEAVRYAVTA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHH-HT-TTSCCBCHH-HHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHh-cc-cccCCCCHH-HHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999876433222 1111222 24 555  7888 999999999999


Q ss_pred             CCCcccccEEEeCC
Q 023555          254 SSEYVSGNIFIVDS  267 (280)
Q Consensus       254 ~~~~i~G~~i~vdg  267 (280)
                      ...+++++ +.+++
T Consensus       231 ~~~~~~~~-i~i~~  243 (247)
T 2jah_A          231 PHHATVHE-IFIRP  243 (247)
T ss_dssp             CTTEEEEE-EEEEE
T ss_pred             CccCccce-EEecC
Confidence            88898886 45543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2.1e-43  Score=301.19  Aligned_cols=251  Identities=26%  Similarity=0.354  Sum_probs=212.5

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+++++++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+.+.   +.++.++.+|++ +.+++++++
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~  102 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY---GVHSKAYKCNIS-DPKSVEETI  102 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH---CSCEEEEECCTT-CHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcceEEEeecC-CHHHHHHHH
Confidence            3456799999999999999999999999999999999999987777766666543   236788999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +++.+.++++|+||||||......++. +.+.++|++.+++|+.+++.+++.+++.|++.+ .++||++||..+......
T Consensus       103 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~  181 (279)
T 3ctm_A          103 SQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIP  181 (279)
T ss_dssp             HHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---
T ss_pred             HHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCC
Confidence            999999999999999999864324555 788999999999999999999999999998754 689999999887652115


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||++++.|+++++.+++++| +||+|+||+++|++.... .......+. ...|++++..|+ |+|+.+.||
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~~~~~-~~~p~~~~~~~~-dvA~~~~~l  257 (279)
T 3ctm_A          182 QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDMKAKWW-QLTPLGREGLTQ-ELVGGYLYL  257 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHHHHHHH-HHSTTCSCBCGG-GTHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHHHHHHH-HhCCccCCcCHH-HHHHHHHHH
Confidence            6778999999999999999999999999 999999999999987532 222222222 336889999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.+.+++|+++.+|||+.+
T Consensus       258 ~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          258 ASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCccccCccCCEEEECCCeec
Confidence            999889999999999999875

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5.6e-43  Score=294.50  Aligned_cols=249  Identities=27%  Similarity=0.458  Sum_probs=216.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.+..   .++.++.+|++ +.+++++++++
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~~   81 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDIT-SEQELSALADF   81 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCC-CHHHHHHHHHH
Confidence            447899999999999999999999999999999999999988888877776532   36788899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|+||||||.... .++ +.+.++|++.+++|+.+++.++++++|.|++.+ .++||++||..+..  +.++.
T Consensus        82 ~~~~~~~~d~vi~~Ag~~~~-~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~  156 (255)
T 1fmc_A           82 AISKLGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--KNINM  156 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCCC-CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTC
T ss_pred             HHHhcCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC--CCCCC
Confidence            99999999999999998633 334 678999999999999999999999999998754 68999999988766  55778


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|++||++++.|++.++.+++++||++|+|+||++.|++.............. ...|+++++.|+ |+|+++.||+++
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-dva~~~~~l~~~  234 (255)
T 1fmc_A          157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKML-QHTPIRRLGQPQ-DIANAALFLCSP  234 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHH-HTCSSCSCBCHH-HHHHHHHHHHSG
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHH-hcCCcccCCCHH-HHHHHHHHHhCC
Confidence            899999999999999999999999999999999999999865443333333333 336889999998 999999999998


Q ss_pred             CCCcccccEEEeCCcccCCC
Q 023555          254 SSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ...+++|+++.+|||...+.
T Consensus       235 ~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          235 AASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             GGTTCCSCEEEESTTSCCCC
T ss_pred             ccccCCCcEEEECCceeccC
Confidence            88899999999999987654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=3.1e-44  Score=303.28  Aligned_cols=245  Identities=23%  Similarity=0.271  Sum_probs=207.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHH---hCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~---~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++|++|++|||||++|||++++++|++   +|++|++++|+.+.+++..+++.+..+ +.++.++.+|++ +.+++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~-~~~~v~~~~   79 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLG-TEAGVQRLL   79 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEecCCC-CHHHHHHHH
Confidence            368899999999999999999999999   899999999999998888888865432 236888999999 789999999


Q ss_pred             HHHHH--HcCCcc--EEEECCCCCCCC-CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEecccc
Q 023555           92 QKAWE--AFGRID--ALVNNAGVSGAV-KSPLD-LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-NQEGSVINISSIAA  164 (280)
Q Consensus        92 ~~~~~--~~g~id--~li~~ag~~~~~-~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~vv~vsS~~~  164 (280)
                      +++.+  .+|++|  +||||||+.... .++.+ .+.++|++.+++|+.+++.++++++|+|+++ ++.|+||++||..+
T Consensus        80 ~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
T 1oaa_A           80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh
Confidence            99988  678899  999999986432 34556 6899999999999999999999999999764 13689999999988


Q ss_pred             ccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---hhhhhhhhhcCCCCCCCCCChH
Q 023555          165 TSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      ..  +.++...|++||+|++.|+++++.|+++  |+||+|+||+++|++......   .+...+......|++++.+|+ 
T Consensus       160 ~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-  234 (259)
T 1oaa_A          160 LQ--PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-  234 (259)
T ss_dssp             TS--CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH-
T ss_pred             cC--CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHH-
Confidence            76  6678899999999999999999999974  999999999999998654321   111122223335788999999 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      |+|+.+.||+++ .+++||++|.+||
T Consensus       235 dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          235 TSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHHHHHhh-ccccCCcEEeccC
Confidence            999999999985 6899999999997

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.8e-43  Score=304.87  Aligned_cols=258  Identities=26%  Similarity=0.402  Sum_probs=217.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +..++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.++++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~-~~~~~~~~~~   96 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVR-DPDMVQNTVS   96 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTT-CHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCC-CHHHHHHHHH
Confidence            45579999999999999999999999999999999999999888888888765432  36888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|+||||||.. ...++.+.+.+++++.+++|+.+++.+++++++.|.++.+.++||++||..+..  +.++
T Consensus        97 ~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~  173 (302)
T 1w6u_A           97 ELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGF  173 (302)
T ss_dssp             HHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CCTT
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc--CCCC
Confidence            9999999999999999975 345666789999999999999999999999999997544568999999988776  5577


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc-cccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE-ITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ...|++||++++.|+++++.+++++||+|++|+||++.|+ +..................|++++..|+ |+|+.+.||+
T Consensus       174 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~~~~l~  252 (302)
T 1w6u_A          174 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAFLC  252 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHH-HHHHHHHHHT
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHH-HHHHHHHHHc
Confidence            8899999999999999999999999999999999999997 4433222111111223347889999998 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCCCCCCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      ++...+++|+++.+|||..++....+
T Consensus       253 ~~~~~~~~G~~~~v~gg~~~~~~~~~  278 (302)
T 1w6u_A          253 SDYASWINGAVIKFDGGEEVLISGEF  278 (302)
T ss_dssp             SGGGTTCCSCEEEESTTHHHHHHSTT
T ss_pred             CCcccccCCCEEEECCCeeeccCCcc
Confidence            98888999999999999877654443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-43  Score=293.37  Aligned_cols=228  Identities=22%  Similarity=0.271  Sum_probs=191.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      ++.++.+|++ +.++++++++++.+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~-~~~~v~~~~~~~~~   73 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN------AVIGIVADLA-HHEDVDVAFAAAVE   73 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTT-SHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------CceEEECCCC-CHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999998888777732      5888999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|+++  +++||++||..+..  +.++...|
T Consensus        74 ~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~~~~~--~~~~~~~Y  148 (235)
T 3l6e_A           74 WGGLPELVLHCAGTG-EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER--GGVLANVLSSAAQV--GKANESLY  148 (235)
T ss_dssp             HHCSCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEECCEECCS--SCSSHHHH
T ss_pred             hcCCCcEEEECCCCC-CCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHHhcC--CCCCCcHH
Confidence            999999999999985 45677889999999999999999999999999999764  36999999998876  66788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc-CCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH-DSS  255 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s-~~~  255 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++......           .+..++.+|+ |+|+.+.||++ +..
T Consensus       149 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pe-dvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          149 CASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPE-DAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHH-HHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHH-HHHHHHHHHHhCCCC
Confidence            9999999999999999999999999999999999998654321           2445778898 99999999998 667


Q ss_pred             CcccccEEEeCCc
Q 023555          256 EYVSGNIFIVDSG  268 (280)
Q Consensus       256 ~~i~G~~i~vdgG  268 (280)
                      .+++|-.+.-...
T Consensus       217 ~~i~~i~~~~~~~  229 (235)
T 3l6e_A          217 CHVTDLFIGRNEG  229 (235)
T ss_dssp             EEEEEEEEEECCC
T ss_pred             cceeeEEEecCCC
Confidence            7899866654443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.1e-43  Score=301.91  Aligned_cols=253  Identities=23%  Similarity=0.372  Sum_probs=196.9

Q ss_pred             CCCCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCH
Q 023555            5 VSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANG   84 (280)
Q Consensus         5 ~~~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (280)
                      +-+.+......+|+ |++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.    .++.++.+|++ +.
T Consensus         8 ~~~~~~~~~~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~-d~   81 (272)
T 2nwq_A            8 HHSSGLVPRGSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVR-DR   81 (272)
T ss_dssp             -------------C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTT-CH
T ss_pred             cccCcccccCCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCC-CH
Confidence            33444444455777 99999999999999999999999999999999998888887777432    36888999999 78


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCC-eEEEEeccc
Q 023555           85 AAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEG-SVINISSIA  163 (280)
Q Consensus        85 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g-~vv~vsS~~  163 (280)
                      ++++++++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|.|++++ .| +||++||..
T Consensus        82 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~  160 (272)
T 2nwq_A           82 AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVA  160 (272)
T ss_dssp             HHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCch
Confidence            9999999999999999999999999864335677889999999999999999999999999998755 57 999999998


Q ss_pred             cccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHH
Q 023555          164 ATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      +..  +.++...|++||++++.|+++++.|++++||+||+|+||+++|++.......+.  .......+.....+|+ |+
T Consensus       161 ~~~--~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe-dv  235 (272)
T 2nwq_A          161 GKW--PYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPE-DI  235 (272)
T ss_dssp             GTS--CCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHH-HH
T ss_pred             hcc--CCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHH-HH
Confidence            876  567888999999999999999999999999999999999999998653211110  0000101112246787 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      |+.+.||+++ ..+++|+.|.+|+|..
T Consensus       236 A~~v~~l~s~-~~~~~g~~i~v~~~~~  261 (272)
T 2nwq_A          236 AETIFWIMNQ-PAHLNINSLEIMPVSQ  261 (272)
T ss_dssp             HHHHHHHHTS-CTTEEEEEEEEEETTE
T ss_pred             HHHHHHHhCC-CccCccceEEEeeccC
Confidence            9999999985 5799999999999853

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-42  Score=299.86  Aligned_cols=256  Identities=26%  Similarity=0.490  Sum_probs=215.6

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC--CCcceEEEEeccCCCHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG--SSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~   88 (280)
                      +....+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....  .+.++.++.+|++ +.++++
T Consensus        10 ~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-~~~~v~   88 (303)
T 1yxm_A           10 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR-NEEEVN   88 (303)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT-CHHHHH
T ss_pred             ccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC-CHHHHH
Confidence            3344579999999999999999999999999999999999999988888888765321  1346889999999 789999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.+.+++ .++||++||.. ..  
T Consensus        89 ~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~--  163 (303)
T 1yxm_A           89 NLVKSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KA--  163 (303)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TT--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-cc--
Confidence            99999999999999999999975 335666789999999999999999999999999654433 68999999987 44  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc-Ccc--chhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE-GLM--KKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~-~~~--~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      +.++...|+++|+++..|+++++.+++++||+||+|+||++.|++.. ...  ........ ....|++++..|+ |+|+
T Consensus       164 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~-dvA~  241 (303)
T 1yxm_A          164 GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGS-FQKIPAKRIGVPE-EVSS  241 (303)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTG-GGGSTTSSCBCTH-HHHH
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHH-HhcCcccCCCCHH-HHHH
Confidence            56778899999999999999999999999999999999999999532 111  11222222 2336889999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      .+.||+++...+++|+++.+|||+.+...
T Consensus       242 ~i~~l~~~~~~~~~G~~~~v~gG~~~~~~  270 (303)
T 1yxm_A          242 VVCFLLSPAASFITGQSVDVDGGRSLYTH  270 (303)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCBT
T ss_pred             HHHHHhCcccccCCCcEEEECCCeecccc
Confidence            99999998889999999999999887644

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=4.9e-44  Score=295.57  Aligned_cols=221  Identities=25%  Similarity=0.381  Sum_probs=190.5

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+                       +|++ +.+++++++++
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~-~~~~v~~~~~~   56 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDIS-DEKSVYHYFET   56 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTT-CHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCC-CHHHHHHHHHH
Confidence            35789999999999999999999999999999999999753                       7999 77888877765


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                          ++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +.++.
T Consensus        57 ----~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~--~~~~~  127 (223)
T 3uce_A           57 ----IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRK--VVANT  127 (223)
T ss_dssp             ----HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTS--CCTTC
T ss_pred             ----hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhcc--CCCCc
Confidence                4899999999998756678889999999999999999999999999999965   58999999998876  66888


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh--hhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD--WLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ..|++||+|++.|+++++.|+++  |+||+|+||+++|++........  ...+......|++++.+|+ |+|+++.||+
T Consensus       128 ~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~~~~l~  204 (223)
T 3uce_A          128 YVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEAS-DIAMAYLFAI  204 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHH-HHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHH-HHHHHHHHHc
Confidence            99999999999999999999987  99999999999999987654322  1122233447999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +  +.++||++|.+|||+.+.
T Consensus       205 ~--~~~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          205 Q--NSYMTGTVIDVDGGALLG  223 (223)
T ss_dssp             H--CTTCCSCEEEESTTGGGC
T ss_pred             c--CCCCCCcEEEecCCeecC
Confidence            7  479999999999999863

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.8e-43  Score=298.04  Aligned_cols=244  Identities=25%  Similarity=0.396  Sum_probs=204.6

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++      +.++.++.+|++ +.+++++++++
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~v~~~~~~   79 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVT-SEKDVQTALAL   79 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------CTTEEEEECCTT-CHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh------CCceEEEEcCCC-CHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988887776665      236888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCC------CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEEEEecc
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPL------DLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-----QEGSVINISSI  162 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~vv~vsS~  162 (280)
                      +.+.++++|+||||||.... .++.      +.+.++|++.+++|+.+++.+++++.|.|+++.     +.++||++||.
T Consensus        80 ~~~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           80 AKGKFGRVDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHHHSCCCEEEECCCCCCC-CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHCCCCCEEEECCccCCC-CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            99999999999999998633 2222      378999999999999999999999999997651     36899999998


Q ss_pred             ccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChH
Q 023555          163 AATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDP  241 (280)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~  241 (280)
                      .+..  +.++...|++||++++.|++.++.+++++||+||+|+||+++|++...... .. ........|+ +++.+|+ 
T Consensus       159 ~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~-  233 (265)
T 2o23_A          159 AAFE--GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-KV-CNFLASQVPFPSRLGDPA-  233 (265)
T ss_dssp             HHHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHH-
T ss_pred             hhcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH-HH-HHHHHHcCCCcCCCCCHH-
Confidence            8876  567888999999999999999999999999999999999999998764321 11 1222334677 8899998 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+|+.+.||++  ..+++|+++.+|||+++.
T Consensus       234 dva~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          234 EYAHLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHhh--cCccCceEEEECCCEecC
Confidence            99999999995  469999999999998765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=2.2e-43  Score=295.76  Aligned_cols=245  Identities=34%  Similarity=0.585  Sum_probs=193.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   77 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA---GINVVVAKGDVK-NPEDVENMVKTA   77 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT---TCCEEEEESCTT-SHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc---CCcEEEEECCCC-CHHHHHHHHHHH
Confidence            5789999999999999999999999999999998 67777777777777543   236888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .++||++||..+..  +.++..
T Consensus        78 ~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~  153 (247)
T 2hq1_A           78 MDAFGRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGII--GNAGQA  153 (247)
T ss_dssp             HHHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------CH
T ss_pred             HHhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc--CCCCCc
Confidence            99999999999999986 334566778899999999999999999999999998754 68999999987765  557788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||++++.|+++++.+++++||++|+|+||+++|++..... .... .......|++++..|+ |+++.+.+|+++.
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  230 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP-DKVK-EMYLNNIPLKRFGTPE-EVANVVGFLASDD  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-HHHH-HHHHTTSTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc-hHHH-HHHHhhCCCCCCCCHH-HHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999865432 2222 2223346888999999 9999999999988


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      +.+++|+++.+|||+++
T Consensus       231 ~~~~~G~~~~v~gG~~~  247 (247)
T 2hq1_A          231 SNYITGQVINIDGGLVM  247 (247)
T ss_dssp             GTTCCSCEEEESTTC--
T ss_pred             cccccCcEEEeCCCccC
Confidence            88999999999999863

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.3e-43  Score=298.64  Aligned_cols=236  Identities=20%  Similarity=0.295  Sum_probs=199.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+ +.+...   ++..+  |    .++++++++++.+.++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~---~~~~~--d----~~~v~~~~~~~~~~~g   71 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYP---QLKPM--S----EQEPAELIEAVTSAYG   71 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT---TSEEC--C----CCSHHHHHHHHHHHHS
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC---cEEEE--C----HHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999999888776655 544321   33332  3    3567889999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++...|++|
T Consensus        72 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~~s  148 (254)
T 1zmt_A           72 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG--PWKELSTYTSA  148 (254)
T ss_dssp             CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS--CCTTCHHHHHH
T ss_pred             CCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCccccc--CCCCchHHHHH
Confidence            9999999999863445677889999999999999999999999999998754 68999999998876  56788899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcc---------cCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLF---------KSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      |++++.|+++++.|++++||+||+|+||++         +|++....  ++..... ....|++++.+|+ |+|+.+.||
T Consensus       149 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~--~~~~~~~-~~~~p~~~~~~p~-dvA~~v~~l  224 (254)
T 1zmt_A          149 RAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--PEHVAHV-KKVTALQRLGTQK-ELGELVAFL  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--HHHHHHH-HHHSSSSSCBCHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC--hHHHHHH-hccCCCCCCcCHH-HHHHHHHHH
Confidence            999999999999999999999999999999         77765431  1222222 2336899999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.+.++||+++.+|||+.+.
T Consensus       225 ~s~~~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          225 ASGSCDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             HTTSCGGGTTCEEEESTTCCCC
T ss_pred             hCcccCCccCCEEEECCCchhh
Confidence            9999999999999999998754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.8e-43  Score=319.96  Aligned_cols=243  Identities=28%  Similarity=0.409  Sum_probs=204.0

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ....+++|++|||||++|||+++|++|+++|++|++++|+..  .+++..+++        .+.++.+|++ +.++++++
T Consensus       207 ~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~--------~~~~~~~Dvt-d~~~v~~~  277 (454)
T 3u0b_A          207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV--------GGTALTLDVT-ADDAVDKI  277 (454)
T ss_dssp             TTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH--------TCEEEECCTT-STTHHHHH
T ss_pred             cccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc--------CCeEEEEecC-CHHHHHHH
Confidence            344689999999999999999999999999999999999743  233332222        3457899999 78999999


Q ss_pred             HHHHHHHcCC-ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           91 VQKAWEAFGR-IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        91 ~~~~~~~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      ++++.+.+++ +|++|||||+. ....+.+.+.++|++.+++|+.+++++++++.+.|.++ +.++||++||..+..  +
T Consensus       278 ~~~~~~~~g~~id~lV~nAGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-~~g~iV~iSS~a~~~--g  353 (454)
T 3u0b_A          278 TAHVTEHHGGKVDILVNNAGIT-RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGLSSMAGIA--G  353 (454)
T ss_dssp             HHHHHHHSTTCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-TTCEEEEECCHHHHH--C
T ss_pred             HHHHHHHcCCCceEEEECCccc-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEeChHhCC--C
Confidence            9999999986 99999999987 44677889999999999999999999999999998764 378999999999877  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .+++..|++||+++++|+++++.+++++||+||+|+||+++|+|.......  ..+......|+++.++|+ |+++++.|
T Consensus       354 ~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~l~r~g~pe-dvA~~v~f  430 (454)
T 3u0b_A          354 NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA--TREVGRRLNSLFQGGQPV-DVAELIAY  430 (454)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHH-HHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh--hHHHHHhhccccCCCCHH-HHHHHHHH
Confidence            688999999999999999999999999999999999999999998654321  122233346889999998 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+++.+.++||++|.+|||..+
T Consensus       431 L~s~~a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          431 FASPASNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             HHCGGGTTCCSCEEEESSSBSC
T ss_pred             HhCCccCCCCCcEEEECCcccc
Confidence            9999999999999999999875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.1e-42  Score=296.47  Aligned_cols=255  Identities=25%  Similarity=0.379  Sum_probs=214.6

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..    ..++.++.+|++ +.+++++++
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~-~~~~~~~~~   83 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----PDVISFVHCDVT-KDEDVRNLV   83 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTT-CHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC----CCceEEEECCCC-CHHHHHHHH
Confidence            344578999999999999999999999999999999999998877776666532    226888999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +++.+.++++|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~  160 (278)
T 2bgk_A           84 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFT--AG  160 (278)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTC--CC
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccC--CC
Confidence            9999999999999999997643 24667889999999999999999999999999998654 78999999988875  44


Q ss_pred             C-CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhhhhhhhh-cCCCCCCCCCChHHHHHH
Q 023555          171 P-GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNVAS-RTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       171 ~-~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~~~~~~~-~~~p~~~~~~~~~~va~~  246 (280)
                      + +...|++||++++.|++.++.+++++||++++|+||++.|++......  ......... ...|.+++..|+ |+|+.
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  239 (278)
T 2bgk_A          161 EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADA  239 (278)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH-HHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHH-HHHHH
Confidence            5 677899999999999999999999999999999999999998765422  122222211 224678889998 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +.||+++...+++|+++.+|||..++...
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  268 (278)
T 2bgk_A          240 VAYLAGDESKYVSGLNLVIDGGYTRTNPA  268 (278)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCCTH
T ss_pred             HHHHcCcccccCCCCEEEECCcccccCCc
Confidence            99999988889999999999999876543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.2e-43  Score=297.58  Aligned_cols=254  Identities=26%  Similarity=0.447  Sum_probs=206.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC----CCcceEEEEeccCCCHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG----SSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.+...    ...++.++.+|++ +.+++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVS-EARAARCLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTT-SHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCC-CHHHHHHHH
Confidence            58899999999999999999999999999999999998888777665543210    0136788999999 789999999


Q ss_pred             HHHHHHcCCc-cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           92 QKAWEAFGRI-DALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        92 ~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+.++++ |+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..|+||++||..+..  +.
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  159 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV--GN  159 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--CC
T ss_pred             HHHHHHhCCCCeEEEECCCcC-CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc--CC
Confidence            9999999999 9999999986 335667789999999999999999999999999998754358999999988766  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||++++.|++.++.+++++||++++|+||++.|++...... ..... .....|++++..|+ |+|+.+.++
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-dva~~~~~l  236 (264)
T 2pd6_A          160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-KVVDK-ITEMIPMGHLGDPE-DVADVVAFL  236 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------C-TGGGCTTCSCBCHH-HHHHHHHHH
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-HHHHH-HHHhCCCCCCCCHH-HHHHHHHHH
Confidence            7888999999999999999999999999999999999999998754321 22222 22336888899998 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      +++...+++|+.+.+|||+.+....+
T Consensus       237 ~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          237 ASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HSGGGTTCCSCEEEESTTC-------
T ss_pred             cCCcccCCCCCEEEECCCceeccccC
Confidence            99888899999999999998764433

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=7.3e-43  Score=292.03  Aligned_cols=242  Identities=31%  Similarity=0.551  Sum_probs=209.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEE-EecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ||++|||||++|||++++++|+++|++|++ .+|+.+.++++.+++.+..   .++.++.+|++ +.++++++++++.+.
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~~~~~~   76 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG---GQAITFGGDVS-KEADVEAMMKTAIDA   76 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT---CEEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEeCCCC-CHHHHHHHHHHHHHH
Confidence            689999999999999999999999999988 4898888887777775432   36788999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.++...|+
T Consensus        77 ~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~  152 (244)
T 1edo_A           77 WGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI--GNIGQANYA  152 (244)
T ss_dssp             SSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTCHHHH
T ss_pred             cCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcC--CCCCCccch
Confidence            999999999999863 35666789999999999999999999999999998754 68999999987766  557788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh-cCCCC
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV-HDSSE  256 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~-s~~~~  256 (280)
                      +||++++.|++.++.+++++||++|+|+||+++|++...... ..... .....|++++..|+ |+|+++.||+ ++.+.
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~  229 (244)
T 1edo_A          153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE-DMEKK-ILGTIPLGRTGQPE-NVAGLVEFLALSPAAS  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH-HHHHH-HHTSCTTCSCBCHH-HHHHHHHHHHHCSGGG
T ss_pred             hhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh-HHHHH-HhhcCCCCCCCCHH-HHHHHHHHHhCCCccC
Confidence            999999999999999999999999999999999998765322 22222 23347889999998 9999999998 77788


Q ss_pred             cccccEEEeCCcccC
Q 023555          257 YVSGNIFIVDSGATL  271 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~  271 (280)
                      +++|+++.+|||+.+
T Consensus       230 ~~~G~~~~v~gG~~~  244 (244)
T 1edo_A          230 YITGQAFTIDGGIAI  244 (244)
T ss_dssp             GCCSCEEEESTTTTC
T ss_pred             CcCCCEEEeCCCccC
Confidence            999999999999863

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.6e-42  Score=287.35  Aligned_cols=233  Identities=26%  Similarity=0.402  Sum_probs=203.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.++++++++++.+.
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~-~~~~v~~~~~~~~~~   77 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVS-KAESVEEFSKKVLER   77 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTT-CHHHHHHHCC-HHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccC-CHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999999999999988888864433  47889999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      ++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++.  ++++|+++|..+..  +.++...|+
T Consensus        78 ~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~--~~~~~~~Y~  152 (235)
T 3l77_A           78 FGDVDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSAR--LIPYGGGYV  152 (235)
T ss_dssp             HSSCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSS--CCTTCHHHH
T ss_pred             cCCCCEEEECCccc-cccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcc--cCCCcchHH
Confidence            99999999999986 45678889999999999999999999999999999543  58999999988766  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      +||+|+++|+++++.  ..+||+||+|+||+++|++.......          .+..++.+|+ |+|+.+.||+++..++
T Consensus       153 ~sKaa~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~p~-dva~~v~~l~~~~~~~  219 (235)
T 3l77_A          153 STKWAARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKPGK----------PKEKGYLKPD-EIAEAVRCLLKLPKDV  219 (235)
T ss_dssp             HHHHHHHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCSCC----------CGGGTCBCHH-HHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHhh--cCCCeEEEEEeCCccccccccccCCc----------ccccCCCCHH-HHHHHHHHHHcCCCCC
Confidence            999999999999944  46799999999999999997654321          1223567888 9999999999999999


Q ss_pred             ccccEEEeCCcccC
Q 023555          258 VSGNIFIVDSGATL  271 (280)
Q Consensus       258 i~G~~i~vdgG~~~  271 (280)
                      ++|+.+..|+|+..
T Consensus       220 ~~~~~~~~~~~~~~  233 (235)
T 3l77_A          220 RVEELMLRSVYQRP  233 (235)
T ss_dssp             CCCEEEECCTTSCC
T ss_pred             ccceEEEeecccCC
Confidence            99999999999853

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=8.6e-43  Score=291.67  Aligned_cols=240  Identities=29%  Similarity=0.441  Sum_probs=201.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.       ...++.+|++ +.++++++++  
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~-~~~~~~~~~~--   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------GIEPVCVDLG-DWEATERALG--   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTT-CHHHHHHHHT--
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------CCCEEEEeCC-CHHHHHHHHH--
Confidence            36899999999999999999999999999999999999887776655431       2445699999 6777777665  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                        .++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++++.+.|.+++..++||++||..+..  +.++..
T Consensus        73 --~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~  147 (244)
T 3d3w_A           73 --SVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHS  147 (244)
T ss_dssp             --TCCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBH
T ss_pred             --HcCCCCEEEECCccC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc--CCCCCc
Confidence              568999999999976 335666788999999999999999999999999998754368999999988776  567788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|++||++++.|++.++.+++++||+||+|+||++.|++...... ......+ ....|++++..|+ |+|+.+.||+++
T Consensus       148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dva~~~~~l~~~  225 (244)
T 3d3w_A          148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTM-LNRIPLGKFAEVE-HVVNAILFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHH-HHTCTTCSCBCHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHH-HhhCCCCCCcCHH-HHHHHHHHHcCc
Confidence            999999999999999999999999999999999999998653221 1222222 2346889999999 999999999998


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.+++|+.+.+|||+.+
T Consensus       226 ~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          226 RSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             cccCCCCCEEEECCCccC
Confidence            888999999999999864

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.9e-42  Score=290.14  Aligned_cols=245  Identities=31%  Similarity=0.556  Sum_probs=212.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.++++++++++.
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~-~~~~~~~~~~~~~   80 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG--VKAHGVEMNLL-SEESINKAFEEIY   80 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC--CCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC--CceEEEEccCC-CHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999888887777754222  36788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.++...
T Consensus        81 ~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  156 (248)
T 2pnf_A           81 NLVDGIDILVNNAGIT-RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFT--GNVGQVN  156 (248)
T ss_dssp             HHSSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHH--CCTTCHH
T ss_pred             HhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcC--CCCCCch
Confidence            9999999999999986 334566789999999999999999999999999998754 68999999987765  5577889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||++++.|++.++.+++++||++|+|+||++.|++..... ... ........|.+++..|+ |+|+++.||+++..
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  233 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS-EEI-KQKYKEQIPLGRFGSPE-EVANVVLFLCSELA  233 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-HHH-HHHHHHTCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc-HHH-HHHHHhcCCCCCccCHH-HHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999999876432 222 22223346888899998 99999999999888


Q ss_pred             CcccccEEEeCCccc
Q 023555          256 EYVSGNIFIVDSGAT  270 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~  270 (280)
                      .+++|+++.+|||+.
T Consensus       234 ~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          234 SYITGEVIHVNGGMF  248 (248)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             hcCCCcEEEeCCCcC
Confidence            899999999999963

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.7e-43  Score=296.84  Aligned_cols=243  Identities=26%  Similarity=0.351  Sum_probs=197.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++ +.++++++++++.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~-~~~~v~~~~~~~~   77 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG---GQCVPVVCDSS-QESEVRSLFEQVD   77 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---SEEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CceEEEECCCC-CHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988888888876542   36888999999 7899999999998


Q ss_pred             HH-cCCccEEEECCCC--C----CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           96 EA-FGRIDALVNNAGV--S----GAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        96 ~~-~g~id~li~~ag~--~----~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      +. +|++|+||||||.  .    ....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  
T Consensus        78 ~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--  154 (260)
T 2qq5_A           78 REQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ--  154 (260)
T ss_dssp             HHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTS--
T ss_pred             HhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcC--
Confidence            76 8999999999953  1    0234667888899999999999999999999999997654 68999999988764  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhh--hhhhh-cCCCCCCCCCChHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL--NNVAS-RTYPLRDFGTTDPALTS  245 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~--~~~~~-~~~p~~~~~~~~~~va~  245 (280)
                      + ++...|++||++++.|+++++.|++++||+||+|+||+++|++..........  ..... ...|+++..+|+ |+|+
T Consensus       155 ~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~va~  232 (260)
T 2qq5_A          155 Y-MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTE-LSGK  232 (260)
T ss_dssp             C-CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHH-HHHH
T ss_pred             C-CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHH-HHHH
Confidence            2 34578999999999999999999999999999999999999986543221110  01111 123566667788 9999


Q ss_pred             HHHHhhcCCC-CcccccEEEeCC
Q 023555          246 LVRYLVHDSS-EYVSGNIFIVDS  267 (280)
Q Consensus       246 ~~~~l~s~~~-~~i~G~~i~vdg  267 (280)
                      ++.||+++.+ .++||++|.+|+
T Consensus       233 ~v~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          233 CVVALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHHHhcCcccccccceeechhh
Confidence            9999999886 499999998874

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=5.1e-44  Score=310.77  Aligned_cols=255  Identities=23%  Similarity=0.335  Sum_probs=168.6

Q ss_pred             CCCCcEEEEecC--CChhHHHHHHHHHHhCCeEEEEecCh-----------hHHH-----------HHHHHHHhhcCC--
Q 023555           16 QLDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRV-----------DRLK-----------SLCDEINKQSGS--   69 (280)
Q Consensus        16 ~l~~k~vlItG~--~~giG~a~a~~l~~~G~~v~l~~r~~-----------~~~~-----------~~~~~~~~~~~~--   69 (280)
                      +|++|++|||||  ++|||+++|++|+++|++|++++|++           ++++           +..+++.+..+.  
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            589999999999  89999999999999999999998753           1111           122233221100  


Q ss_pred             CcceEEEEe----------ccCC-------CHHHHHHHHHHHHHHcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHh
Q 023555           70 SVRAMAVEL----------DVSA-------NGAAIENSVQKAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKT  131 (280)
Q Consensus        70 ~~~~~~~~~----------D~~~-------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~  131 (280)
                      ........+          |+++       +.++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            012222222          2331       134789999999999999999999999753 2456778899999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC-CCChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcc
Q 023555          132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLF  209 (280)
Q Consensus       132 n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v  209 (280)
                      |+.+++.++++++|+|++   .|+||++||..+..  +.+++ ..|++||+|+++|+++++.|+++ +||+||+|+||++
T Consensus       166 N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKE---GGSALALSYIASEK--VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEE---EEEEEEEEECC--------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             hhHHHHHHHHHHHHHHhc---CceEEEEecccccc--ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            999999999999999965   38999999998876  55666 68999999999999999999985 8999999999999


Q ss_pred             cCccccCccch---hh---hhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCCCC
Q 023555          210 KSEITEGLMKK---DW---LNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       210 ~t~~~~~~~~~---~~---~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      +|++.......   .+   ..+......|++++++|+ |+|+.+.||+++.+.++||++|.+|||+++.+.+.
T Consensus       241 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~  312 (319)
T 2ptg_A          241 KSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESD-DVGRAALFLLSPLARAVTGATLYVDNGLHAMGQAL  312 (319)
T ss_dssp             C-------------------------------CCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTCTTC----
T ss_pred             cChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHhCcccCCccCCEEEECCCceeeccCC
Confidence            99987543210   11   111122346899999999 99999999999999999999999999998876544

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.3e-42  Score=291.45  Aligned_cols=235  Identities=28%  Similarity=0.389  Sum_probs=192.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.      .++.++.+|++ +.++++++++++.+.+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g   73 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVR-NRAAIEEMLASLPAEWC   73 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTT-CHHHHHHHHHTSCTTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCC-CHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988887776662      26788999999 78999999999989999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++...|++|
T Consensus        74 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~Y~as  150 (248)
T 3asu_A           74 NIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW--PYAGGNVYGAT  150 (248)
T ss_dssp             CCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCTTCHHHHHH
T ss_pred             CCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhcc--CCCCCchHHHH
Confidence            9999999999853345667889999999999999999999999999997754 68999999998876  66788899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCccc-CccccCccc-h-hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFK-SEITEGLMK-K-DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~-t~~~~~~~~-~-~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      |++++.|+++++.|++++||+||+|+||+++ |++...... . ......    .+.....+|+ |+|+.+.||+++ ..
T Consensus       151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~----~~~~~~~~p~-dvA~~v~~l~s~-~~  224 (248)
T 3asu_A          151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT----YQNTVALTPE-DVSEAVWWVSTL-PA  224 (248)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------CCBCHH-HHHHHHHHHHHS-CT
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH----HhccCCCCHH-HHHHHHHHHhcC-Cc
Confidence            9999999999999999999999999999999 998643211 1 111111    1112235787 999999999996 57


Q ss_pred             cccccEEEeCCccc
Q 023555          257 YVSGNIFIVDSGAT  270 (280)
Q Consensus       257 ~i~G~~i~vdgG~~  270 (280)
                      +++|+.+.++++..
T Consensus       225 ~~~g~~i~v~~~~~  238 (248)
T 3asu_A          225 HVNINTLEMMPVTQ  238 (248)
T ss_dssp             TCCCCEEEECCTTC
T ss_pred             cceeeEEEEccccc
Confidence            99999999998743

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-42  Score=292.15  Aligned_cols=245  Identities=23%  Similarity=0.335  Sum_probs=194.1

Q ss_pred             CCCCCCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555            3 SQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus         3 ~~~~~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      .+..+..+.++..++++|++|||||++|||++++++|+++|++|++++|+.+.+++    +    +   ...++ +|+. 
T Consensus         3 ~~~~~~~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~----~---~~~~~-~D~~-   69 (249)
T 1o5i_A            3 SDKIHHHHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S----G---HRYVV-CDLR-   69 (249)
T ss_dssp             -------------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T----C---SEEEE-CCTT-
T ss_pred             ccccchhhhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h----C---CeEEE-eeHH-
Confidence            33444444456668999999999999999999999999999999999998743322    1    1   45566 8983 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                        ++++++++++    .++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||.
T Consensus        70 --~~~~~~~~~~----~~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~  141 (249)
T 1o5i_A           70 --KDLDLLFEKV----KEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSF  141 (249)
T ss_dssp             --TCHHHHHHHS----CCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCG
T ss_pred             --HHHHHHHHHh----cCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcch
Confidence              3455555543    4899999999975 345667889999999999999999999999999998754 6899999999


Q ss_pred             ccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHH
Q 023555          163 AATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      .+..  +.++...|++||++++.|+++++.|++++||+||+|+||+++|++...... ...........|++++.+|+ |
T Consensus       142 ~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~p~~~~~~~~-d  217 (249)
T 1o5i_A          142 SVIS--PIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-EEKKKQVESQIPMRRMAKPE-E  217 (249)
T ss_dssp             GGTS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-HHHHHHHHTTSTTSSCBCHH-H
T ss_pred             HhcC--CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch-hhHHHHHHhcCCCCCCcCHH-H
Confidence            8876  567889999999999999999999999999999999999999998653221 11110223347889999999 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +|+.+.||+++.+.+++|+++.+|||+...
T Consensus       218 vA~~i~~l~s~~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          218 IASVVAFLCSEKASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            999999999998899999999999998653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.1e-43  Score=306.38  Aligned_cols=254  Identities=26%  Similarity=0.320  Sum_probs=197.6

Q ss_pred             CCCCCcEEEEecC--CChhHHHHHHHHHHhCCeEEEEecChhH------HH-HHHHHHHhhc-CCC---cceEEE-----
Q 023555           15 CQLDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDR------LK-SLCDEINKQS-GSS---VRAMAV-----   76 (280)
Q Consensus        15 ~~l~~k~vlItG~--~~giG~a~a~~l~~~G~~v~l~~r~~~~------~~-~~~~~~~~~~-~~~---~~~~~~-----   76 (280)
                      ++|++|++|||||  ++|||+++|++|+++|++|++++|++..      .. ...+++.+.. +..   .....+     
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            3589999999999  8999999999999999999999986410      00 0011121110 100   122222     


Q ss_pred             -----EeccCC-------CHHHHHHHHHHHHHHcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHH
Q 023555           77 -----ELDVSA-------NGAAIENSVQKAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSWLVSKYV  143 (280)
Q Consensus        77 -----~~D~~~-------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  143 (280)
                           .+|+++       +.++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.+++.+++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  164 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF  164 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence                 233332       245789999999999999999999999753 2356778899999999999999999999999


Q ss_pred             HHHHHhcCCCCeEEEEeccccccCCCCCCC-CCChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCccc--
Q 023555          144 CIRMRDANQEGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMK--  219 (280)
Q Consensus       144 ~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~~~--  219 (280)
                      +|+|++   +|+||++||..+..  +.+++ ..|++||+|++.|+++++.|+++ +||+||+|+||+++|++......  
T Consensus       165 ~~~m~~---~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~  239 (315)
T 2o2s_A          165 GPIMNE---GGSAVTLSYLAAER--VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG  239 (315)
T ss_dssp             STTEEE---EEEEEEEEEGGGTS--CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS
T ss_pred             HHHHhc---CCEEEEEecccccc--cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc
Confidence            999964   48999999988876  55666 58999999999999999999985 89999999999999998653321  


Q ss_pred             -h---hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          220 -K---DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       220 -~---~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                       .   +...+......|++++++|+ |+|+.+.||+++.+.++||++|.+|||+.+.++
T Consensus       240 ~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  297 (315)
T 2o2s_A          240 EKSFIDYAIDYSYNNAPLRRDLHSD-DVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQ  297 (315)
T ss_dssp             SSCHHHHHHHHHHHHSSSCCCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             cchhHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHhCchhccCcCCEEEECCCeeeecc
Confidence             0   11111122337999999999 999999999999999999999999999987543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=2e-42  Score=297.87  Aligned_cols=254  Identities=22%  Similarity=0.274  Sum_probs=198.0

Q ss_pred             CCCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHH-------HHHHHHHhhcCCCc---ceEEEEe----
Q 023555           15 CQLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLK-------SLCDEINKQSGSSV---RAMAVEL----   78 (280)
Q Consensus        15 ~~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~----   78 (280)
                      ++|++|++|||||+  +|||+++|++|+++|++|++++|++....       ...+++.+ ...+.   ......+    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV-LPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGB-CTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhh-hccccccccccccccceec
Confidence            36899999999999  99999999999999999999997642110       00001110 00000   0122233    


Q ss_pred             ----ccCC-----------CHHHHHHHHHHHHHHcCCccEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 023555           79 ----DVSA-----------NGAAIENSVQKAWEAFGRIDALVNNAGVSG-AVKSPLDLTEEEWNHIMKTNLTGSWLVSKY  142 (280)
Q Consensus        79 ----D~~~-----------~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  142 (280)
                          |+++           +.++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.+++.++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                3331           145789999999999999999999999642 235667889999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEEeccccccCCCCCCC-CCChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCccch
Q 023555          143 VCIRMRDANQEGSVINISSIAATSRGQLPGG-VAYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGLMKK  220 (280)
Q Consensus       143 ~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~~~~  220 (280)
                      ++|+|++   .|+||++||..+..  +.+++ ..|++||+|++.|+++++.|+++ +||+||+|+||+++|++.......
T Consensus       163 ~~~~m~~---~g~iv~isS~~~~~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~  237 (297)
T 1d7o_A          163 FLPIMNP---GGASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             HGGGEEE---EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred             HHHHhcc---CceEEEEecccccc--CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc
Confidence            9999964   48999999988876  55666 68999999999999999999985 899999999999999997653211


Q ss_pred             hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCCC
Q 023555          221 DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       221 ~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +..........|++++.+|+ |+|+.+.||+++.+.++||++|.+|||+++.++.
T Consensus       238 ~~~~~~~~~~~p~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~~  291 (297)
T 1d7o_A          238 DTMIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMGVA  291 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             HHHHHHhhccCCCCCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCceeecCC
Confidence            21222222336899999999 9999999999999999999999999999886543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.2e-42  Score=321.61  Aligned_cols=231  Identities=29%  Similarity=0.462  Sum_probs=193.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++||++|||||++|||+++|+.|+++|++|+++++..  +++..+++.+..   .+...+.+|++   ++.+++++++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g---~~~~~~~~Dv~---~~~~~~~~~~  389 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAG---GEAWPDQHDVA---KDSEAIIKNV  389 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTT---CEEEEECCCHH---HHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcC---CeEEEEEcChH---HHHHHHHHHH
Confidence            478999999999999999999999999999999998742  344555665432   35677788873   3457889999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.+|++|+||||||+. ...++.+++.++|++.+++|+.|++.++|+++|+|++++ .|+||++||..+..  +.+++.
T Consensus       390 ~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~--~~~~~~  465 (604)
T 2et6_A          390 IDKYGTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIY--GNFGQA  465 (604)
T ss_dssp             HHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHS--CCTTBH
T ss_pred             HHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc--CCCCCh
Confidence            99999999999999986 346788999999999999999999999999999998754 79999999998876  567889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+.+|+++++.|++++||+||+|+||. +|+|.......+           ..+..+|+ |+|+++.||+|+.
T Consensus       466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~-----------~~~~~~pe-~vA~~v~~L~s~~  532 (604)
T 2et6_A          466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ-----------DKNLYHAD-QVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGG-GTHHHHHHTTSTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh-----------hccCCCHH-HHHHHHHHHhCCc
Confidence            9999999999999999999999999999999996 999865432111           12345788 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      +. +||++|.+|||+..
T Consensus       533 ~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          533 VP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             CC-CCSCEEEEETTEEE
T ss_pred             cC-CCCcEEEECCCeeE
Confidence            88 99999999999865

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-42  Score=286.33  Aligned_cols=240  Identities=30%  Similarity=0.486  Sum_probs=201.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++     .  ...++.+|++ +.++++++++  
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~~D~~-~~~~~~~~~~--   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----P--GIEPVCVDLG-DWDATEKALG--   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----T--TCEEEECCTT-CHHHHHHHHT--
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----c--CCCcEEecCC-CHHHHHHHHH--
Confidence            3689999999999999999999999999999999999988776655432     1  2445699999 6777777665  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                        .++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..  +.++..
T Consensus        73 --~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~  147 (244)
T 1cyd_A           73 --GIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLI  147 (244)
T ss_dssp             --TCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBH
T ss_pred             --HcCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC--CCCCcc
Confidence              5689999999999863 34667789999999999999999999999999998754358999999988776  567788


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .|++||++++.|++.++.+++++||++++|+||++.|++...... ..+..... ...|++++..|+ |+++++.+|+++
T Consensus       148 ~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-dva~~~~~l~~~  225 (244)
T 1cyd_A          148 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLK-ERHPLRKFAEVE-DVVNSILFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHH-HHSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHH-hcCCccCCCCHH-HHHHHHHHHhCc
Confidence            999999999999999999999999999999999999998653221 22222222 236888999999 999999999998


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      ...+++|+.+.+|||+.+
T Consensus       226 ~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          226 RSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             GGTTCCSSEEEESTTGGG
T ss_pred             hhhcccCCEEEECCCccC
Confidence            888999999999999864

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-42  Score=290.18  Aligned_cols=249  Identities=24%  Similarity=0.446  Sum_probs=210.8

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      ..+.+++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++.+.   +.++.++.+|++ +.+++++
T Consensus        13 ~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~-~~~~~~~   88 (274)
T 1ja9_A           13 SDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADIS-KPSEVVA   88 (274)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT-SHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHH
Confidence            34456799999999999999999999999999999999999 777777777777653   236788999999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc-cCC
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT-SRG  168 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~-~~~  168 (280)
                      +++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|++   +++||++||..+. .  
T Consensus        89 ~~~~~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~--  162 (274)
T 1ja9_A           89 LFDKAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMT--  162 (274)
T ss_dssp             HHHHHHHHHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCEEEEEcChHhccC--
Confidence            9999999999999999999986 3456667899999999999999999999999999963   3899999998876 4  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----------cchhhhhhhhhcCCCCCCCC
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----------MKKDWLNNVASRTYPLRDFG  237 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~~~p~~~~~  237 (280)
                      +.++...|++||++++.|++.++.+++.+||++++|+||++.|++....           ..............|++++.
T Consensus       163 ~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (274)
T 1ja9_A          163 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIG  242 (274)
T ss_dssp             SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCB
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCcc
Confidence            4577889999999999999999999999999999999999999986521           11011122233346888999


Q ss_pred             CChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       238 ~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      .|+ |+|+++.+|+++...+++|+++.+|||+.
T Consensus       243 ~~~-dva~~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          243 YPA-DIGRAVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             CHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CHH-HHHHHHHHHhCcccccccCcEEEecCCcC
Confidence            998 99999999999888899999999999963

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.7e-42  Score=322.13  Aligned_cols=232  Identities=28%  Similarity=0.409  Sum_probs=196.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh---------hHHHHHHHHHHhhcCCCcceEEEEeccCCCHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---------DRLKSLCDEINKQSGSSVRAMAVELDVSANGA   85 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (280)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.         +.+++..+++.+..+   +.   .+|++ +.+
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~---~~---~~d~~-d~~   76 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---VA---VADYN-NVL   76 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC---EE---EEECC-CTT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC---eE---EEEcC-CHH
Confidence            368999999999999999999999999999999998765         667777777765322   22   35776 556


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc
Q 023555           86 AIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT  165 (280)
Q Consensus        86 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~  165 (280)
                      +++++++++.+.+|++|+||||||+. ...++.+++.++|++.+++|+.|++.++|+++|+|++++ .|+||++||..+.
T Consensus        77 ~~~~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~  154 (604)
T 2et6_A           77 DGDKIVETAVKNFGTVHVIINNAGIL-RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGL  154 (604)
T ss_dssp             CHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHc
Confidence            68999999999999999999999986 446788999999999999999999999999999998754 6999999999887


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      .  +.+++..|++||+|+.+|+++++.|++++||+||+|+|| +.|+|.......+.    .       +..+|+ |++.
T Consensus       155 ~--~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~~----~-------~~~~pe-~vA~  219 (604)
T 2et6_A          155 Y--GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPPM----L-------EKLGPE-KVAP  219 (604)
T ss_dssp             H--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHHH----H-------TTCSHH-HHHH
T ss_pred             C--CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChhh----h-------ccCCHH-HHHH
Confidence            6  567889999999999999999999999999999999998 68888654322111    1       124677 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.||+++. .++||++|.+|||+..
T Consensus       220 ~v~~L~s~~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          220 LVLYLSSAE-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             HHHHHTSSS-CCCCSCEEEEETTEEE
T ss_pred             HHHHHhCCc-ccCCCCEEEECCCeEE
Confidence            999999988 9999999999999753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=7.4e-42  Score=288.02  Aligned_cols=247  Identities=23%  Similarity=0.353  Sum_probs=211.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...   +.++.++.+|++ +.++++++++++
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~   79 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD---GGDAAFFAADLA-TSEACQQLVDEF   79 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT---TCEEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc---CCceEEEECCCC-CHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999 78888777777653   236888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCCeEEEEeccccccCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN----QEGSVINISSIAATSRGQL  170 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~vv~vsS~~~~~~~~~  170 (280)
                      .+.++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+.+    ..++||++||..+... +.
T Consensus        80 ~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~  158 (258)
T 3afn_B           80 VAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-GG  158 (258)
T ss_dssp             HHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-CC
T ss_pred             HHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-CC
Confidence            999999999999999733445677889999999999999999999999999997532    1289999999876531 34


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||++++.+++.++.+++++||+||+|+||++.|++..... ..... ......|++++..|+ |+|+.+.++
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~-~~~~~~~~~~~~~~~-dva~~~~~l  235 (258)
T 3afn_B          159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT-QDVRD-RISNGIPMGRFGTAE-EMAPAFLFF  235 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC-HHHHH-HHHTTCTTCSCBCGG-GTHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC-HHHHH-HHhccCCCCcCCCHH-HHHHHHHHH
Confidence            677899999999999999999999999999999999999999876532 22222 233346889999999 999999999


Q ss_pred             hcCCCC-cccccEEEeCCccc
Q 023555          251 VHDSSE-YVSGNIFIVDSGAT  270 (280)
Q Consensus       251 ~s~~~~-~i~G~~i~vdgG~~  270 (280)
                      +++... +++|+++.+|||+.
T Consensus       236 ~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          236 ASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HCHHHHTTCCSEEEEESTTSS
T ss_pred             hCcchhccccCCEEeECCCcc
Confidence            987766 99999999999974

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.8e-41  Score=283.68  Aligned_cols=241  Identities=27%  Similarity=0.502  Sum_probs=208.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcCCCcceEE-EEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMA-VELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+++++..+++.+..   .++.. +.+|++ +.++++++++++.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~~~~~~~~~~~   76 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG---SPLVAVLGANLL-EAEAATALVHQAAE   76 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTT---CSCEEEEECCTT-SHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEeccCC-CHHHHHHHHHHHHH
Confidence            4799999999999999999999999999998 899888888777775532   24555 899999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++.+ .++||++||..+..  +.++...|
T Consensus        77 ~~~~~d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y  152 (245)
T 2ph3_A           77 VLGGLDTLVNNAGIT-RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGIL--GNPGQANY  152 (245)
T ss_dssp             HHTCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCSSBHHH
T ss_pred             hcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhcc--CCCCCcch
Confidence            999999999999986 334567789999999999999999999999999998754 68999999987766  55778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      ++||++++.+++.++.+++++||++++|+||++.|++..... ...... .....|.+++..|+ |+|+.+.+++++...
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~~~~~  229 (245)
T 2ph3_A          153 VASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP-QEVKEA-YLKQIPAGRFGRPE-EVAEAVAFLVSEKAG  229 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-HHHHHH-HHHTCTTCSCBCHH-HHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC-HHHHHH-HHhcCCCCCCcCHH-HHHHHHHHHhCcccc
Confidence            999999999999999999999999999999999999876432 222222 22346888899998 999999999998888


Q ss_pred             cccccEEEeCCccc
Q 023555          257 YVSGNIFIVDSGAT  270 (280)
Q Consensus       257 ~i~G~~i~vdgG~~  270 (280)
                      +++|+.+.+|||+.
T Consensus       230 ~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          230 YITGQTLCVDGGLT  243 (245)
T ss_dssp             TCCSCEEEESTTCS
T ss_pred             cccCCEEEECCCCC
Confidence            99999999999975

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=278.61  Aligned_cols=234  Identities=24%  Similarity=0.369  Sum_probs=206.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-------eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.++++.+.+++...   +.++.++.+|++ +.++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~-~~~~v~~~   76 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---GALTDTITADIS-DMADVRRL   76 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---TCEEEEEECCTT-SHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc---CCeeeEEEecCC-CHHHHHHH
Confidence            378999999999999999999999999       9999999998888887777542   346888999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..  +.
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~  152 (244)
T 2bd0_A           77 TTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATK--AF  152 (244)
T ss_dssp             HHHHHHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CC
T ss_pred             HHHHHHhCCCCCEEEEcCCcC-CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcC--CC
Confidence            999999999999999999986 445667789999999999999999999999999998654 68999999998876  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||++++.|+++++.+++++||+|++|+||++.|++........           ..++..|+ |+|+.+.++
T Consensus       153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~-dva~~~~~l  220 (244)
T 2bd0_A          153 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPE-DIAAPVVQA  220 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHH-HHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHH-HHHHHHHHH
Confidence            788899999999999999999999999999999999999999876432110           12567788 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +++...+++|+++..|+|..+
T Consensus       221 ~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          221 YLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HTSCTTEEEEEEEEEETTCCC
T ss_pred             HhCCccccchheEEecccccc
Confidence            999999999999999999876

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=8.7e-42  Score=319.79  Aligned_cols=247  Identities=28%  Similarity=0.388  Sum_probs=185.8

Q ss_pred             CCCCCCCCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec---------ChhHHHHHHHHHHhhcCCCc
Q 023555            1 MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR---------RVDRLKSLCDEINKQSGSSV   71 (280)
Q Consensus         1 ~~~~~~~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r---------~~~~~~~~~~~~~~~~~~~~   71 (280)
                      |++--..++...+..+++||++|||||++|||+++|+.|+++|++|++++|         +.+.++...+++.+..+   
T Consensus         1 ~~~~~~~~~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~---   77 (613)
T 3oml_A            1 MHHHHHHMSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---   77 (613)
T ss_dssp             --------------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC---
T ss_pred             CCCCcccccCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC---
Confidence            444455566677788999999999999999999999999999999999988         66777888888866432   


Q ss_pred             ceEEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC
Q 023555           72 RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN  151 (280)
Q Consensus        72 ~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  151 (280)
                      .   ..+|++ +.++++++++++.+.+|++|+||||||+. ...++.+.+.++|++.+++|+.|++.++++++|+|++++
T Consensus        78 ~---~~~D~~-d~~~~~~~~~~~~~~~g~iDiLVnnAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~  152 (613)
T 3oml_A           78 E---AVADYN-SVIDGAKVIETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN  152 (613)
T ss_dssp             C---EEECCC-CGGGHHHHHC----------CEECCCCCC-CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             e---EEEEeC-CHHHHHHHHHHHHHHCCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            2   247998 67899999999999999999999999987 446778899999999999999999999999999998754


Q ss_pred             CCCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCC
Q 023555          152 QEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY  231 (280)
Q Consensus       152 ~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  231 (280)
                       .|+||++||..+..  +.+++..|++||+|+++|+++++.|++++||+||+|+||.+ |++.........         
T Consensus       153 -~g~IV~isS~a~~~--~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~---------  219 (613)
T 3oml_A          153 -YGRIIMTSSNSGIY--GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDIL---------  219 (613)
T ss_dssp             -CEEEEEECCHHHHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHH---------
T ss_pred             -CCEEEEECCHHHcC--CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhh---------
Confidence             79999999998877  66788999999999999999999999999999999999975 666654433221         


Q ss_pred             CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                        .+..+|+ |+|+++.||+++. .++||++|.+|||+...
T Consensus       220 --~~~~~pe-dvA~~v~~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          220 --FNELKPK-LIAPVVAYLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             --HTTCCGG-GTHHHHHHTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             --hhcCCHH-HHHHHHHHhcCCC-cCCCceEEEECCCeEEE
Confidence              1234788 9999999999988 89999999999998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3e-42  Score=289.86  Aligned_cols=229  Identities=16%  Similarity=0.170  Sum_probs=195.4

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++..+..+|++|||||++|||+++|++|+++|++|++++|+.++.+               ...+.+|++ +.+++++++
T Consensus        15 ~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~d~~-d~~~v~~~~   78 (251)
T 3orf_A           15 VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------DHSFTIKDS-GEEEIKSVI   78 (251)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------SEEEECSCS-SHHHHHHHH
T ss_pred             cccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------ccceEEEeC-CHHHHHHHH
Confidence            4555667999999999999999999999999999999999875432               124688998 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.++++|+||||||.........+.+.++|++.+++|+.+++.++++++|.|++   .|+||++||..+..  +.+
T Consensus        79 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~  153 (251)
T 3orf_A           79 EKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALN--RTS  153 (251)
T ss_dssp             HHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCT
T ss_pred             HHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhcc--CCC
Confidence            9999999999999999998755444677889999999999999999999999999965   48999999998876  668


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      +...|++||+|++.|+++++.+++  ++||+||+|+||+++|++......          ..|.+++.+|+ |+|+.+.|
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~-dva~~i~~  222 (251)
T 3orf_A          154 GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS----------DANFDDWTPLS-EVAEKLFE  222 (251)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT----------TSCGGGSBCHH-HHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc----------cccccccCCHH-HHHHHHHH
Confidence            889999999999999999999987  889999999999999998643221          24667778888 99999999


Q ss_pred             hhcC-CCCcccccEEEeCCcccCC
Q 023555          250 LVHD-SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~-~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++ .+.++||+++.+++|....
T Consensus       223 l~~~~~~~~~tG~~i~v~~g~~~~  246 (251)
T 3orf_A          223 WSTNSDSRPTNGSLVKFETKSKVT  246 (251)
T ss_dssp             HHHCGGGCCCTTCEEEEEEETTEE
T ss_pred             HhcCccccCCcceEEEEecCCccc
Confidence            9998 8899999999999886543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=4.3e-41  Score=291.98  Aligned_cols=232  Identities=30%  Similarity=0.472  Sum_probs=196.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe---------cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA---------RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGA   85 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~---------r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++         |+.+++++..+++....+   .   ..+|++ +.+
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~---~~~D~~-~~~   77 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---K---AVANYD-SVE   77 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---E---EEEECC-CGG
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---e---EEEeCC-CHH
Confidence            478999999999999999999999999999999964         567778877777765322   2   357998 678


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc
Q 023555           86 AIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT  165 (280)
Q Consensus        86 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~  165 (280)
                      +++++++++.+.++++|+||||||+.. ..++.+.+.++|+..+++|+.+++.++++++|+|++++ .|+||++||..+.
T Consensus        78 ~~~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~  155 (319)
T 1gz6_A           78 AGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGI  155 (319)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc
Confidence            899999999999999999999999863 34566789999999999999999999999999998754 6899999998776


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      .  +.+++..|++||+|++.|++.++.+++++||+||+|+||++ |++.....+...    .       +..+|+ |+|.
T Consensus       156 ~--~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~----~-------~~~~p~-dvA~  220 (319)
T 1gz6_A          156 Y--GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDL----V-------EALKPE-YVAP  220 (319)
T ss_dssp             H--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHH----H-------HHSCGG-GTHH
T ss_pred             c--CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChhh----h-------ccCCHH-HHHH
Confidence            6  55778899999999999999999999999999999999998 877543222111    1       124677 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.||+++ ..+++|++|.+|||+..
T Consensus       221 ~~~~l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          221 LVLWLCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HHHHHTST-TCCCCSCEEEEETTEEE
T ss_pred             HHHHHhCc-hhhcCCCEEEECCCeEE
Confidence            99999987 45899999999999764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.3e-41  Score=288.57  Aligned_cols=233  Identities=18%  Similarity=0.295  Sum_probs=194.7

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.   +.++.++.+|++ +.+++++++++
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~-d~~~v~~~~~~  101 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ---GFDAHGVVCDVR-HLDEMVRLADE  101 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCceEEEEccCC-CHHHHHHHHHH
Confidence            44689999999999999999999999999999999999999999998888764   347889999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+.++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..+..  +.++.
T Consensus       102 ~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  178 (301)
T 3tjr_A          102 AFRLLGGVDVVFSNAGIV-VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--PNAGL  178 (301)
T ss_dssp             HHHHHSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--CCTTB
T ss_pred             HHHhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--CCCCc
Confidence            999999999999999986 446777889999999999999999999999999998765568999999999877  67888


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhh--------hhhhhcCCCCCCCCCChHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL--------NNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~--------~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++..........        ...........+..+|+ |+|+
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-dvA~  257 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSAD-DVAR  257 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHH-HHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHH-HHHH
Confidence            99999999999999999999999999999999999999986532111000        00001111223456787 9999


Q ss_pred             HHHHhhcCC
Q 023555          246 LVRYLVHDS  254 (280)
Q Consensus       246 ~~~~l~s~~  254 (280)
                      .+...+...
T Consensus       258 ~i~~~l~~~  266 (301)
T 3tjr_A          258 LTADAILAN  266 (301)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhcC
Confidence            888887644

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.5e-42  Score=294.84  Aligned_cols=235  Identities=21%  Similarity=0.275  Sum_probs=187.1

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .++++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++      ..++.++.+|++ +.+++++++
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~-d~~~v~~~~   81 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM------AGQVEVRELDLQ-DLSSVRRFA   81 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS------SSEEEEEECCTT-CHHHHHHHH
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------cCCeeEEEcCCC-CHHHHHHHH
Confidence            4567899999999999999999999999999999999999998887766554      237889999999 778888887


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---  168 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---  168 (280)
                      +++    +++|+||||||+..   +..+.+.++|++.+++|+.+++.++++++|.|.+     +||++||..+....   
T Consensus        82 ~~~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~~  149 (291)
T 3rd5_A           82 DGV----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRINL  149 (291)
T ss_dssp             HTC----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCCS
T ss_pred             Hhc----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCCc
Confidence            765    79999999999863   3356778899999999999999999999998853     89999998876421   


Q ss_pred             --------CCCCCCCChhhHHHHHHHHHHHHHHhCCCC--eEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCC
Q 023555          169 --------QLPGGVAYASSKAGLNAMTKCLSLELGVHK--IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGT  238 (280)
Q Consensus       169 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~g--i~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (280)
                              +.++...|++||+|++.|++.++.+++++|  |+||+|+||+++|++...... . ....... .|.+++..
T Consensus       150 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~-~-~~~~~~~-~~~~~~~~  226 (291)
T 3rd5_A          150 EDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR-K-LGDALMS-AATRVVAT  226 (291)
T ss_dssp             SCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CH
T ss_pred             ccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch-H-HHHHHHH-HHHHHHhC
Confidence                    134556899999999999999999999877  999999999999999865421 1 1122222 56777776


Q ss_pred             -ChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          239 -TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       239 -~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                       |+ |+|+.+.||+++  ++++|+++.+|||+.-
T Consensus       227 ~~~-~~A~~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          227 DAD-FGARQTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HHH-HHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             CHH-HHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence             66 999999999997  4999999999999864

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.7e-41  Score=295.59  Aligned_cols=243  Identities=14%  Similarity=0.100  Sum_probs=200.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHH-hCCeEEEEecChhHH------------HHHHHHHHhhcCCCcceEEEEeccCCC
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRL------------KSLCDEINKQSGSSVRAMAVELDVSAN   83 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (280)
                      -.+|++|||||++|||+++|+.|++ .|++|++++|+.+..            +.+.+.+.+.   +.++..+.+|++ +
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~---G~~a~~i~~Dvt-d  120 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK---GLYAKSINGDAF-S  120 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTT-S
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc---CCceEEEECCCC-C
Confidence            5699999999999999999999999 999999999875432            1223344332   346788999999 7


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCC------------CCCCC---------------------CCCCHHHHHHHHH
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVSG------------AVKSP---------------------LDLTEEEWNHIMK  130 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~  130 (280)
                      .++++++++++.+.+|++|+||||||...            ..+++                     .+.+.++|++.++
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~  200 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVA  200 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHH
Confidence            89999999999999999999999999741            22344                     6789999999999


Q ss_pred             hhhhHHH-HHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC--CCChhhHHHHHHHHHHHHHHhCCC-CeEEEEeec
Q 023555          131 TNLTGSW-LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG--VAYASSKAGLNAMTKCLSLELGVH-KIRVNSICP  206 (280)
Q Consensus       131 ~n~~~~~-~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~~~~~~-gi~vn~v~p  206 (280)
                      +|..+.+ .+++++.+.+...+ +|+||++||..+..  +.|.+  ..|++||+|+++|+|++|.|++++ |||||+|+|
T Consensus       201 Vn~~~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~--~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaP  277 (405)
T 3zu3_A          201 VMGGEDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKI--THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVL  277 (405)
T ss_dssp             HHSSHHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred             hhchhHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhC--cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEe
Confidence            9999998 77888775432233 58999999999876  55666  899999999999999999999999 999999999


Q ss_pred             CcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          207 GLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       207 G~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |++.|++...++..+.+.....+  |++|.++|+ |+++.+.||+|+   ++.|+.+.+|++..+.
T Consensus       278 G~i~T~~s~~ip~~p~y~~~l~~--~mkr~G~~E-d~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          278 KAVVSQASSAIPMMPLYLSLLFK--VMKEKGTHE-GCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             CCCCCHHHHTSTTHHHHHHHHHH--HHHHHTCCC-CHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             CCCcCchhhcCCCCcHHHHHHHH--HHhcCCCcH-HHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            99999998776544433333322  799999999 999999999987   7889999999987653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.1e-41  Score=280.02  Aligned_cols=225  Identities=19%  Similarity=0.228  Sum_probs=182.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++      ..++.++.+|++ +.++++++++++.+   
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~v~~~~~~~~~---   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL------SNNVGYRARDLA-SHQEVEQLFEQLDS---   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC------SSCCCEEECCTT-CHHHHHHHHHSCSS---
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH------hhccCeEeecCC-CHHHHHHHHHHHhh---
Confidence            68999999999999999999999999999999998888776655      236778999999 78888888876644   


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ..|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.++  +++||++||..+..  +.++...|++|
T Consensus        72 ~~d~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~~~~~--~~~~~~~Y~as  146 (230)
T 3guy_A           72 IPSTVVHSAGSG-YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ--PVNVVMIMSTAAQQ--PKAQESTYCAV  146 (230)
T ss_dssp             CCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--CCEEEEECCGGGTS--CCTTCHHHHHH
T ss_pred             cCCEEEEeCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEeecccCC--CCCCCchhHHH
Confidence            349999999986 45677789999999999999999999999999999764  35999999998876  66888999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc-CCCCcc
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH-DSSEYV  258 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s-~~~~~i  258 (280)
                      |+|++.|+++++.|++++||+||+|+||+++|++.....          ...|.+++.+|+ |+|+.+.||++ +...++
T Consensus       147 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~-dvA~~i~~l~~~~~~~~i  215 (230)
T 3guy_A          147 KWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG----------KSLDTSSFMSAE-DAALMIHGALANIGNGYV  215 (230)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHH-HHHHHHHHHCCEETTEEE
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC----------CCCCcccCCCHH-HHHHHHHHHHhCcCCCCc
Confidence            999999999999999999999999999999999875432          124678888998 99999999887 788899


Q ss_pred             cccEEEeCCccc
Q 023555          259 SGNIFIVDSGAT  270 (280)
Q Consensus       259 ~G~~i~vdgG~~  270 (280)
                      ||+.+..|....
T Consensus       216 tg~~~~~~~~~~  227 (230)
T 3guy_A          216 SDITVNREGHHH  227 (230)
T ss_dssp             EEEEEEC-----
T ss_pred             cceeecCCCCCC
Confidence            999999887653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-40  Score=282.22  Aligned_cols=243  Identities=24%  Similarity=0.395  Sum_probs=199.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.+... +.++.++.+|++ +.++++++++++.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~-~~~~v~~~~~~~~   81 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVA-DQQQLRDTFRKVV   81 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC-CCceEEEecCCC-CHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999888877777754321 336888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.++++|+||||||...         .++|++.+++|+.+++.+++.++|.|++.+  +.|+||++||..+..  +.++.
T Consensus        82 ~~~g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  150 (267)
T 2gdz_A           82 DHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQ  150 (267)
T ss_dssp             HHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTC
T ss_pred             HHcCCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC--CCCCC
Confidence            99999999999999752         356889999999999999999999997643  258999999998876  56778


Q ss_pred             CCChhhHHHHHHHHHHH--HHHhCCCCeEEEEeecCcccCccccCccchhhhh------hhhhcCCCCCCCCCChHHHHH
Q 023555          174 VAYASSKAGLNAMTKCL--SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN------NVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~l--a~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~------~~~~~~~p~~~~~~~~~~va~  245 (280)
                      ..|++||++++.|++++  +.+++++||+||+|+||+++|++...........      +......+..++..|+ |+|+
T Consensus       151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~  229 (267)
T 2gdz_A          151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIAN  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH-HHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHH-HHHH
Confidence            89999999999999995  6889999999999999999999865432211110      0011112334466888 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCCCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      .+.||+++.  +++|+++.+|||..++..
T Consensus       230 ~v~~l~s~~--~~~G~~~~v~gg~~~~~~  256 (267)
T 2gdz_A          230 GLITLIEDD--ALNGAIMKITTSKGIHFQ  256 (267)
T ss_dssp             HHHHHHHCT--TCSSCEEEEETTTEEEEC
T ss_pred             HHHHHhcCc--CCCCcEEEecCCCccccc
Confidence            999999875  599999999998876543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.5e-41  Score=283.79  Aligned_cols=224  Identities=13%  Similarity=0.142  Sum_probs=191.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..++|++|||||++|||++++++|+++|++|++++|+.+..+             ....++.+|++ +.++++++++++.
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~-~~~~v~~~~~~~~   69 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDS-FTEQADQVTAEVG   69 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSC-HHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCC-CHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999875432             13467789999 7899999999999


Q ss_pred             HHc--CCccEEEECCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           96 EAF--GRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        96 ~~~--g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.+  +++|+||||||... ..++ .+.+.++|++.+++|+.+++.++++++|+|++   +|+||++||..+..  +.++
T Consensus        70 ~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--~~~~  143 (241)
T 1dhr_A           70 KLLGDQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALD--GTPG  143 (241)
T ss_dssp             HHHTTCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTT
T ss_pred             HHhCCCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHcc--CCCC
Confidence            999  79999999999863 3455 67889999999999999999999999999964   48999999998876  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ...|++||++++.|+++++.|++  ++||+||+|+||+++|++........          +..+..+|+ |+|+.+.|+
T Consensus       144 ~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~-~vA~~v~~l  212 (241)
T 1dhr_A          144 MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLE-FLVETFHDW  212 (241)
T ss_dssp             BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHH-HHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch----------hhccCCCHH-HHHHHHHHH
Confidence            89999999999999999999999  89999999999999999864321110          112233455 999999999


Q ss_pred             hcCCCCcccccEEEeCCccc
Q 023555          251 VHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +++...+++|+.+.+|||..
T Consensus       213 ~~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          213 ITGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             HTTTTCCCTTCEEEEEEETT
T ss_pred             hcCCCcCccceEEEEeCCCC
Confidence            99999999999999999865

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.6e-41  Score=299.57  Aligned_cols=243  Identities=16%  Similarity=0.127  Sum_probs=198.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHH-hCCeEEEEecChhHHH------------HHHHHHHhhcCCCcceEEEEeccCCCH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLK------------SLCDEINKQSGSSVRAMAVELDVSANG   84 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (280)
                      .+|++|||||++|||+++|+.|++ .|++|++++|+.+.++            .+.+.+.+.   +.++..+.+|++ +.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---G~~a~~i~~Dvt-d~  135 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---GLYSKSINGDAF-SD  135 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTT-SH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---CCcEEEEEecCC-CH
Confidence            599999999999999999999999 9999999999765432            223444432   346888999999 78


Q ss_pred             HHHHHHHHHHHHHc-CCccEEEECCCCC------------CCCCCC---------------------CCCCHHHHHHHHH
Q 023555           85 AAIENSVQKAWEAF-GRIDALVNNAGVS------------GAVKSP---------------------LDLTEEEWNHIMK  130 (280)
Q Consensus        85 ~~~~~~~~~~~~~~-g~id~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~  130 (280)
                      ++++++++++.+.+ |++|+||||||..            ....++                     .+.+.++|++.++
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~  215 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTIT  215 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHH
Confidence            99999999999999 9999999999862            122333                     3679999999999


Q ss_pred             hhhhHHH-HHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC--CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecC
Q 023555          131 TNLTGSW-LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG--VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPG  207 (280)
Q Consensus       131 ~n~~~~~-~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG  207 (280)
                      +|..+.+ .+++++.+.+...+ +|+||++||..+..  +.|.+  ..|++||+|+.+|+|++|.|++++|||||+|+||
T Consensus       216 Vn~~~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~--~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG  292 (422)
T 3s8m_A          216 VMGGQDWELWIDALEGAGVLAD-GARSVAFSYIGTEI--TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLK  292 (422)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGG--GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             hhchhHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhc--cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcC
Confidence            9999987 77888766433323 68999999998876  44554  8999999999999999999999999999999999


Q ss_pred             cccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCccc-ccEEEeCCcccC
Q 023555          208 LFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVS-GNIFIVDSGATL  271 (280)
Q Consensus       208 ~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~-G~~i~vdgG~~~  271 (280)
                      +++|++...++..+.+.....  .|++|.++|+ |+++.+.||+|+.- |.+ |+...+|++..+
T Consensus       293 ~i~T~~~~~ip~~~~~~~~~~--~~m~r~G~pE-dva~~v~~L~sd~l-y~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          293 SVVTQASAAIPVMPLYISMVY--KIMKEKGLHE-GTIEQLDRLFRERL-YRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             CCCCTTGGGSTHHHHHHHHHH--HHHHHTTCCC-CHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred             CCcChhhhcCCCChHHHHHHH--hhhcCCcChH-HHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence            999999877654443222222  3899999999 99999999999765 766 777669998766

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9e-40  Score=278.83  Aligned_cols=250  Identities=23%  Similarity=0.353  Sum_probs=204.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++.++++|++|||||++|||+++++.|+++|++|++++|+.++++++.+++.+.. ...++.++.+|++ +.++++++++
T Consensus        26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~-~~~~v~~~~~  103 (279)
T 1xg5_A           26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLS-NEEDILSMFS  103 (279)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTT-CHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC-CCceEEEEEecCC-CHHHHHHHHH
Confidence            4456899999999999999999999999999999999999988888888776542 2246788999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEeccccccCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINISSIAATSRGQLP  171 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vsS~~~~~~~~~~  171 (280)
                      ++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|++.+. +++||++||..+....+.+
T Consensus       104 ~~~~~~g~iD~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (279)
T 1xg5_A          104 AIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  182 (279)
T ss_dssp             HHHHHHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HHHHhCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCC
Confidence            9999999999999999986 3456778899999999999999999999999999987542 3899999998876322556


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      +...|+++|++++.|++.++.+++  ++||++|+|+||+++|++......... ... ....+..++.+|+ |+|+.+.|
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~-dvA~~i~~  259 (279)
T 1xg5_A          183 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-EKA-AATYEQMKCLKPE-DVAEAVIY  259 (279)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-HHH-HHHHC---CBCHH-HHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh-hHH-hhhcccccCCCHH-HHHHHHHH
Confidence            778899999999999999999998  889999999999999998532211110 011 1113455678888 99999999


Q ss_pred             hhcCCCCcccccEEEeCCc
Q 023555          250 LVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG  268 (280)
                      ++++...+.+|+....++|
T Consensus       260 l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          260 VLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHSCTTEEEEEEEEEETT
T ss_pred             HhcCCcceEeeeEEEccCC
Confidence            9998888988875554444

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-41  Score=281.22  Aligned_cols=223  Identities=14%  Similarity=0.168  Sum_probs=190.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+             ....++.+|++ +.++++++++++.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~-~~~~~~~~~~~~~~   66 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKN-WTEQEQSILEQTAS   66 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSC-HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCC-CHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999876432             13466789999 78999999999999


Q ss_pred             Hc--CCccEEEECCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           97 AF--GRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        97 ~~--g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      .+  +++|+||||||... ..++ .+.+.++|++.+++|+.+++.++++++|+|++   .|+||++||..+..  +.++.
T Consensus        67 ~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~  140 (236)
T 1ooe_A           67 SLQGSQVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMG--PTPSM  140 (236)
T ss_dssp             HHTTCCEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTB
T ss_pred             HhCCCCCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhcc--CCCCc
Confidence            98  79999999999863 3455 67789999999999999999999999999964   48999999998876  66788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH-Hh
Q 023555          174 VAYASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR-YL  250 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~-~l  250 (280)
                      ..|++||++++.|+++++.|++  ++||+||+|+||+++|++.......          .+..+..+|+ |+|+.+. +|
T Consensus       141 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~-dvA~~i~~~l  209 (236)
T 1ooe_A          141 IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLS-FISEHLLKWT  209 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHH-HHHHHHHHHH
Confidence            9999999999999999999998  8999999999999999986432111          1122344566 9999987 56


Q ss_pred             hcCCCCcccccEEEeCCccc
Q 023555          251 VHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +++...++||+.+.+|||..
T Consensus       210 ~s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          210 TETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             HCGGGCCCTTCEEEEEEETT
T ss_pred             cCCCcccccccEEEEecCCC
Confidence            68889999999999999965

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=2.7e-40  Score=278.30  Aligned_cols=231  Identities=19%  Similarity=0.272  Sum_probs=188.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCH-HHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANG-AAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~   93 (280)
                      +|++|++|||||++|||++++++|+++|++ |++++|+.+.  +..+++.+..+ +.++.++.+|++ +. +++++++++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~-~~~~~~~~~D~~-~~~~~~~~~~~~   77 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP-KVNITFHTYDVT-VPVAESKKLLKK   77 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT-TSEEEEEECCTT-SCHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC-CceEEEEEEecC-CChHHHHHHHHH
Confidence            689999999999999999999999999997 9999998632  12233333322 346888999999 66 899999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +.+.++++|+||||||..         +.+++++.+++|+.+++.++++++|.|.+++  ..|+||++||..+..  +.+
T Consensus        78 ~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~  146 (254)
T 1sby_A           78 IFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AIH  146 (254)
T ss_dssp             HHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCT
T ss_pred             HHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc--CCC
Confidence            999999999999999974         2466899999999999999999999997643  158999999998876  567


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      +...|++||++++.|+++++.++.++||+||+|+||+++|++......    .+...... ...|+   .+|+ |+|+.+
T Consensus       147 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~-dvA~~i  221 (254)
T 1sby_A          147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-LSHPT---QTSE-QCGQNF  221 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-TTSCC---EEHH-HHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-hcCCC---CCHH-HHHHHH
Confidence            888999999999999999999998889999999999999998654321    11111222 12343   3677 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcc
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      .++++   .+++|+++.+|||+
T Consensus       222 ~~~~~---~~~~G~~~~v~gG~  240 (254)
T 1sby_A          222 VKAIE---ANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHH---HCCTTCEEEEETTE
T ss_pred             HHHHH---cCCCCCEEEEeCCc
Confidence            99986   57899999999995

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.9e-39  Score=268.65  Aligned_cols=228  Identities=29%  Similarity=0.406  Sum_probs=186.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ..+|++|||||++|||++++++|+++|++|++++|+.+++++..+++.       ++.++.+|++ +.++++++++++.+
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~-~~~~~~~~~~~~~~   74 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-------GALPLPGDVR-EEGDWARAVAAMEE   74 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTT-CHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-------hceEEEecCC-CHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999887776655442       5677899999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..  +.++...|
T Consensus        75 ~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y  150 (234)
T 2ehd_A           75 AFGELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKN--PFKGGAAY  150 (234)
T ss_dssp             HHSCCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTS--CCTTCHHH
T ss_pred             HcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcC--CCCCCchh
Confidence            999999999999986 345667889999999999999999999999999998754 68999999988766  56778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      +++|++++.|+++++.+++++||++|+|+||+++|++..... ..     .       ...+|+ |+|+.+.|++++...
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~-----~-------~~~~~~-dvA~~~~~l~~~~~~  216 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP-GQ-----A-------WKLKPE-DVAQAVLFALEMPGH  216 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHH-HHHHHHHHHHHSCCS
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc-cc-----c-------CCCCHH-HHHHHHHHHhCCCcc
Confidence            999999999999999999999999999999999999865321 00     0       034777 999999999999999


Q ss_pred             cccccEEEeCCccc
Q 023555          257 YVSGNIFIVDSGAT  270 (280)
Q Consensus       257 ~i~G~~i~vdgG~~  270 (280)
                      +++|+.+..+++..
T Consensus       217 ~~~g~~~~~~~~~~  230 (234)
T 2ehd_A          217 AMVSEIELRPTRPT  230 (234)
T ss_dssp             SCCCEEECCC----
T ss_pred             cccceEEEeecCCC
Confidence            99999777666544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-39  Score=272.06  Aligned_cols=230  Identities=29%  Similarity=0.421  Sum_probs=194.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|++|||||++|||++++++|+++|++|++++|+.+ .              .++.++.+|++ +.++++++++++ +.
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~-~~~~~~~~~~~~-~~   63 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVT-REEDVRRAVARA-QE   63 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTT-CHHHHHHHHHHH-HH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCC-CHHHHHHHHHHH-Hh
Confidence            3689999999999999999999999999999999864 1              13477899999 789999999999 88


Q ss_pred             cCCccEEEECCCCCCCCCCCCC----CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEEEEeccccccCC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLD----LTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-----QEGSVINISSIAATSRG  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~g~vv~vsS~~~~~~~  168 (280)
                      ++++|++|||||.... .++.+    .+.++|++.+++|+.+++.+++++.+.|.+.+     ..++||++||..+..  
T Consensus        64 ~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--  140 (242)
T 1uay_A           64 EAPLFAVVSAAGVGLA-EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--  140 (242)
T ss_dssp             HSCEEEEEECCCCCCC-CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--
T ss_pred             hCCceEEEEcccccCc-ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--
Confidence            8999999999997633 33333    34569999999999999999999999997643     124999999988876  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChHHHHHHH
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPALTSLV  247 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~va~~~  247 (280)
                      +.++...|++||++++.+++.++.+++++||++++|+||++.|++...... ... +......|+ +++..|+ |+|+.+
T Consensus       141 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-dva~~~  217 (242)
T 1uay_A          141 GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE-KAK-ASLAAQVPFPPRLGRPE-EYAALV  217 (242)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH-HHH-HHHHTTCCSSCSCCCHH-HHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch-hHH-HHHHhhCCCcccCCCHH-HHHHHH
Confidence            557788999999999999999999999999999999999999998765432 222 223334677 8899998 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccCC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+|+++  .+++|+++.+|||+.++
T Consensus       218 ~~l~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          218 LHILEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHC--TTCCSCEEEESTTCCCC
T ss_pred             HHHhcC--CCCCCcEEEEcCCeecC
Confidence            999987  78999999999999764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.5e-39  Score=276.30  Aligned_cols=228  Identities=28%  Similarity=0.402  Sum_probs=190.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++      +.++.++.+|++ +.++++++++++.
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~~~~~~~~~~   74 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY------PDRAEAISLDVT-DGERIDVVAADVL   74 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC------TTTEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCceEEEeeCC-CHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998877766543      236888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++...
T Consensus        75 ~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  150 (281)
T 3m1a_A           75 ARYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQL--SFAGFSA  150 (281)
T ss_dssp             HHHSCCSEEEECCCCE-EECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTCHH
T ss_pred             HhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccC--CCCCchH
Confidence            9999999999999986 446777899999999999999999999999999998754 68999999998876  6678899


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------hhh-----hhhhhhcCCCCCCCCCChHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------KDW-----LNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------~~~-----~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      |++||++++.|+++++.+++++||+||+|+||+++|++......      ..+     .........|.+++..|+ |+|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  229 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPA-KAA  229 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHH-HHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHH-HHH
Confidence            99999999999999999999999999999999999998643210      011     011122335778888998 999


Q ss_pred             HHHHHhhcCCC
Q 023555          245 SLVRYLVHDSS  255 (280)
Q Consensus       245 ~~~~~l~s~~~  255 (280)
                      +++.++++...
T Consensus       230 ~a~~~~~~~~~  240 (281)
T 3m1a_A          230 AAIRLALDTEK  240 (281)
T ss_dssp             HHHHHHHHSSS
T ss_pred             HHHHHHHhCCC
Confidence            99999987653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7e-39  Score=268.34  Aligned_cols=228  Identities=24%  Similarity=0.307  Sum_probs=188.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+.++.+.+    .  ...++.++.+|++ +.++++++++++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~--~~~~~~~~~~D~~-~~~~~~~~~~~~   73 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I--KDSRVHVLPLTVT-CDKSLDTFVSKV   73 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C--CCTTEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c--cCCceEEEEeecC-CHHHHHHHHHHH
Confidence            568999999999999999999999999  999999999877655422    1  1347888999999 789999999999


Q ss_pred             HHHcC--CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CC----CCeEEEEecc
Q 023555           95 WEAFG--RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA------NQ----EGSVINISSI  162 (280)
Q Consensus        95 ~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~----~g~vv~vsS~  162 (280)
                      .+.++  ++|+||||||...+..++.+.+.+++++.+++|+.+++.++++++|.|.+.      +.    .++||++||.
T Consensus        74 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  153 (250)
T 1yo6_A           74 GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSG  153 (250)
T ss_dssp             HHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCG
T ss_pred             HHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccC
Confidence            99998  999999999987435677788999999999999999999999999999764      21    5899999998


Q ss_pred             ccccCCCC-----CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCC
Q 023555          163 AATSRGQL-----PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG  237 (280)
Q Consensus       163 ~~~~~~~~-----~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (280)
                      .+......     ++...|++||++++.|+++++.+++++||+|++|+||+++|++...                 .+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~  216 (250)
T 1yo6_A          154 LGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAAL  216 (250)
T ss_dssp             GGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------
T ss_pred             ccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCC
Confidence            87652211     4677899999999999999999999999999999999999998642                 1234


Q ss_pred             CChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       238 ~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      +|+ ++|+.+.++++....+++|+.+.+|||.
T Consensus       217 ~~~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          217 TVE-QSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             --H-HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             CHH-HHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            677 9999999999988889999999999985

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.4e-38  Score=276.28  Aligned_cols=235  Identities=23%  Similarity=0.342  Sum_probs=189.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.... ...++.++.+|++ +.+++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~-~~~~v~~~~~~   80 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG-SGPEVMGVQLDVA-SREGFKMAADE   80 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEECCTT-CHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCCeEEEEECCCC-CHHHHHHHHHH
Confidence            557899999999999999999999999999999999999999999888886643 3347889999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEeccccccCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRG  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~vv~vsS~~~~~~~  168 (280)
                      +.+.++++|+||||||+. ...++.+.+.++|++.+++|+.|++.++++++|.|.++     ++.|+||++||..+..  
T Consensus        81 ~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--  157 (319)
T 3ioy_A           81 VEARFGPVSILCNNAGVN-LFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--  157 (319)
T ss_dssp             HHHHTCCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC--
T ss_pred             HHHhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc--
Confidence            999999999999999986 45677889999999999999999999999999999764     2478999999999877  


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-hhhh--------hhhcCCCCCC-CCC
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNN--------VASRTYPLRD-FGT  238 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-~~~~--------~~~~~~p~~~-~~~  238 (280)
                      +.+++..|++||+|+++|+++++.|++++||+|++|+||+|+|++........ ....        ......+... ..+
T Consensus       158 ~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (319)
T 3ioy_A          158 AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME  237 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCC
Confidence            66788999999999999999999999999999999999999999876432111 1000        0000011111 146


Q ss_pred             ChHHHHHHHHHhhcCC
Q 023555          239 TDPALTSLVRYLVHDS  254 (280)
Q Consensus       239 ~~~~va~~~~~l~s~~  254 (280)
                      |+ ++|+.+...+...
T Consensus       238 pe-~vA~~~~~al~~~  252 (319)
T 3ioy_A          238 PD-VIGARVIEAMKAN  252 (319)
T ss_dssp             HH-HHHHHHHHHHHTT
T ss_pred             HH-HHHHHHHHHHHcC
Confidence            76 9999888877544

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.9e-40  Score=279.47  Aligned_cols=223  Identities=20%  Similarity=0.343  Sum_probs=171.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||++|||++++++|+++|++|++++|+.++++.             .   +.+|++ +.++++++++++   ++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~---~~~Dl~-~~~~v~~~~~~~---~~   61 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D---LSTAEG-RKQAIADVLAKC---SK   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C---TTSHHH-HHHHHHHHHTTC---TT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c---cccCCC-CHHHHHHHHHHh---CC
Confidence            689999999999999999999999999999998654221             1   568888 667777766532   38


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC------------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR------------  167 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~------------  167 (280)
                      ++|+||||||.....        +.|++.+++|+.+++.++++++|+|++++ .|+||++||..+...            
T Consensus        62 ~id~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~  132 (257)
T 1fjh_A           62 GMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CCSEEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CCCEEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhc
Confidence            999999999975311        12889999999999999999999998754 689999999887621            


Q ss_pred             --------------CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhc-CCC
Q 023555          168 --------------GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-TYP  232 (280)
Q Consensus       168 --------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~p  232 (280)
                                    .+.++...|++||++++.|++.++.+++++||+||+|+||+++|++................ ..|
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  212 (257)
T 1fjh_A          133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPP  212 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCS
T ss_pred             ccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccc
Confidence                          13346679999999999999999999999999999999999999987654222221222221 368


Q ss_pred             CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++++.+|+ |+|+.+.||+++.++++||+.+.+|||+.+.
T Consensus       213 ~~~~~~~~-dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~  251 (257)
T 1fjh_A          213 MGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             TTSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCCCCCHH-HHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence            88999999 9999999999988889999999999998654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-39  Score=280.39  Aligned_cols=192  Identities=28%  Similarity=0.401  Sum_probs=163.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-----hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-----VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +|++|++|||||++|||+++|++|+++|++|++++|+     .+.++++.+.+...   +.++.++.+|++ +.++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~---~~~~~~~~~Dvt-d~~~v~~~   77 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN---DVDLRTLELDVQ-SQVSVDRA   77 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH---TCCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc---CCcEEEEEeecC-CHHHHHHH
Confidence            5789999999999999999999999999999988775     45566665555443   236889999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++++.+.+|++|+||||||+. ..+++.+.+.++|++.+++|+.|++.++++++|+|++++ .|+||++||..+... ..
T Consensus        78 ~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~-~~  154 (324)
T 3u9l_A           78 IDQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGG-TP  154 (324)
T ss_dssp             HHHHHHHHSCCSEEEECCCCC-BCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-CC
T ss_pred             HHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccC-CC
Confidence            999999999999999999986 456778899999999999999999999999999998755 789999999887631 34


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT  214 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~  214 (280)
                      ++...|++||+|+++|+++++.|++++||+||+|+||++.|++.
T Consensus       155 ~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          155 PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            66788999999999999999999999999999999999997764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-38  Score=267.02  Aligned_cols=235  Identities=23%  Similarity=0.271  Sum_probs=195.7

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhC---CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G---~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      .+..++++|++|||||++|||++++++|+++|   ++|++++|+.+.++.+ +++.+.   ..++.++.+|++ +.++++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~---~~~~~~~~~Dl~-~~~~v~   88 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN---HSNIHILEIDLR-NFDAYD   88 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH---CTTEEEEECCTT-CGGGHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc---CCceEEEEecCC-ChHHHH
Confidence            34457999999999999999999999999999   9999999998765543 344332   236888999999 789999


Q ss_pred             HHHHHHHHHcC--CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CC----CCeE
Q 023555           89 NSVQKAWEAFG--RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA------NQ----EGSV  156 (280)
Q Consensus        89 ~~~~~~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~----~g~v  156 (280)
                      ++++++.+.++  ++|+||||||......++.+.+.+++++.+++|+.+++.++++++|.|.++      +.    .++|
T Consensus        89 ~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  168 (267)
T 1sny_A           89 KLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  168 (267)
T ss_dssp             HHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence            99999999998  899999999987434567788999999999999999999999999999864      21    4899


Q ss_pred             EEEeccccccCCC-CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCC
Q 023555          157 INISSIAATSRGQ-LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRD  235 (280)
Q Consensus       157 v~vsS~~~~~~~~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~  235 (280)
                      |++||..+..... .++...|++||++++.|++.++.+++++||+|++|+||+++|++...                 ..
T Consensus       169 v~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~  231 (267)
T 1sny_A          169 INMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SA  231 (267)
T ss_dssp             EEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TC
T ss_pred             EEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CC
Confidence            9999988765221 13667899999999999999999999999999999999999998642                 12


Q ss_pred             CCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      ..+|+ ++++.+.++++.....++|+.+.+|||.
T Consensus       232 ~~~~~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          232 PLDVP-TSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             SBCHH-HHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             CCCHH-HHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            24566 9999999999988889999999999986

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=6.1e-39  Score=268.66  Aligned_cols=218  Identities=24%  Similarity=0.387  Sum_probs=156.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++++|++|||||++|||+++|++|++ |++|++++|+.+.+++..+ +       .++.++.+|++ +.+. .+.+.+.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~-------~~~~~~~~D~~-~~~~-~~~~~~~   69 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I-------EGVEPIESDIV-KEVL-EEGGVDK   69 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S-------TTEEEEECCHH-HHHH-TSSSCGG
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h-------cCCcceecccc-hHHH-HHHHHHH
Confidence            368899999999999999999999998 9999999999887766543 1       25778899998 4444 4445555


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|++.  +|+||++||..+..  +.++..
T Consensus        70 ~~~~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~  144 (245)
T 3e9n_A           70 LKNLDHVDTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNG--PHPGNT  144 (245)
T ss_dssp             GTTCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC------------CH
T ss_pred             HHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcCccccc--CCCCch
Confidence            56788999999999986 34567788999999999999999999999999999774  48999999998876  667889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++........      ....+.+++.+|+ |+|+.+.||++..
T Consensus       145 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~-dvA~~i~~l~~~~  217 (245)
T 3e9n_A          145 IYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPK-EIANAIRFVIDAG  217 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHH-HHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHH-HHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999876543221      1224667788898 9999999999865


Q ss_pred             C
Q 023555          255 S  255 (280)
Q Consensus       255 ~  255 (280)
                      .
T Consensus       218 ~  218 (245)
T 3e9n_A          218 E  218 (245)
T ss_dssp             T
T ss_pred             C
Confidence            4

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2e-38  Score=281.93  Aligned_cols=244  Identities=13%  Similarity=0.103  Sum_probs=197.5

Q ss_pred             CCCcEEEEecCCChhHHH--HHHHHHHhCCeEEEEecChhH------------HHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           17 LDNKVVMVTGASSGLGRE--FCLDLAKAGCRIVAAARRVDR------------LKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a--~a~~l~~~G~~v~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      ..+|++|||||++|||++  ++++|+++|++|++++|+...            .+.+.+.+.+.   +.++..+.+|++ 
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dvt-  133 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK---GLVAKNFIEDAF-  133 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTT-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc---CCcEEEEEeeCC-
Confidence            679999999999999999  999999999999999997533            23333333332   346888999999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCC------------CCCCCC---------------------CCCCHHHHHHHH
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVS------------GAVKSP---------------------LDLTEEEWNHIM  129 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~  129 (280)
                      +.++++++++++.+.+|++|+||||||..            ....++                     .+.+.++|++.+
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~  213 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETR  213 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHH
Confidence            78999999999999999999999999973            011223                     356999999999


Q ss_pred             HhhhhHHH-HHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC--CCChhhHHHHHHHHHHHHHHhCC-CCeEEEEee
Q 023555          130 KTNLTGSW-LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG--VAYASSKAGLNAMTKCLSLELGV-HKIRVNSIC  205 (280)
Q Consensus       130 ~~n~~~~~-~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~  205 (280)
                      ++|..+.+ .+++++.+.+...+ +|+||++||..+..  +.|.+  ..|++||+|+++|++++|.|+++ +|||||+|+
T Consensus       214 ~vn~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~--~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~  290 (418)
T 4eue_A          214 KVMGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPR--TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSV  290 (418)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             HHhhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcC--CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEE
Confidence            99999988 77777776543333 68999999998876  55666  99999999999999999999999 999999999


Q ss_pred             cCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          206 PGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       206 pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ||+++|++...+...+.+.....  .++++.++|+ ++++.+.||+++  ...+|+.+.+|||..+.
T Consensus       291 PG~v~T~~s~~ip~~p~y~~~~~--~~mk~~G~~E-~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          291 NKALVTKASAYIPTFPLYAAILY--KVMKEKNIHE-NCIMQIERMFSE--KIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             CCCCCCHHHHTSTTHHHHHHHHH--HHHHHTTCCC-CHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred             CCcCcChhhhcCCCCcHHHHHHH--HHHhhcCChH-HHHHHHHHHhhc--cccCCCccccCCCceee
Confidence            99999999877654332222222  2577789999 999999999987  46789999999876553

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-37  Score=265.20  Aligned_cols=222  Identities=20%  Similarity=0.296  Sum_probs=191.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.+++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.   +.++.++.+|++ +.++++++++
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~v~~~~~  100 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---GAKVHTFVVDCS-NREDIYSSAK  100 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTT-CHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc---CCeEEEEEeeCC-CHHHHHHHHH
Confidence            345799999999999999999999999999999999999998888888877653   236888999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.++++|+||||||.. ...++.+.+.+++++.+++|+.+++.++++++|.|.+.+ .++||++||..+..  +.++
T Consensus       101 ~~~~~~g~iD~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  176 (272)
T 1yb1_A          101 KVKAEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHV--SVPF  176 (272)
T ss_dssp             HHHHHTCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CC--CHHH
T ss_pred             HHHHHCCCCcEEEECCCcC-CCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcC--CCCC
Confidence            9999999999999999986 335666778899999999999999999999999998754 68999999988765  4466


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhC---CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELG---VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~---~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ...|++||++++.|++.++.+++   ++||+||+|+||+++|++....            ..|++++.+|+ |+|+.+.+
T Consensus       177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~------------~~~~~~~~~~~-dva~~i~~  243 (272)
T 1yb1_A          177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------------STSLGPTLEPE-EVVNRLMH  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------------HHHHCCCCCHH-HHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc------------cccccCCCCHH-HHHHHHHH
Confidence            78899999999999999999996   6799999999999999985421            02345677888 99999999


Q ss_pred             hhcCCC
Q 023555          250 LVHDSS  255 (280)
Q Consensus       250 l~s~~~  255 (280)
                      ++....
T Consensus       244 ~~~~~~  249 (272)
T 1yb1_A          244 GILTEQ  249 (272)
T ss_dssp             HHHTTC
T ss_pred             HHHcCC
Confidence            987553

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-37  Score=266.94  Aligned_cols=227  Identities=27%  Similarity=0.382  Sum_probs=184.1

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCH-HHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANG-AAIENSV   91 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~   91 (280)
                      ++..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +. +++++++
T Consensus         6 ~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~-~~~~~v~~~~   82 (311)
T 3o26_A            6 PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH--ENVVFHQLDVT-DPIATMSSLA   82 (311)
T ss_dssp             ------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CSEEEEECCTT-SCHHHHHHHH
T ss_pred             CCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEccCC-CcHHHHHHHH
Confidence            44568899999999999999999999999999999999999999999888876543  36888999999 55 9999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCC-----------------------------CCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAV-----------------------------KSPLDLTEEEWNHIMKTNLTGSWLVSKY  142 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~-----------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~  142 (280)
                      +.+.+.++++|+||||||+....                             .++.+.+.+++++.+++|+.|++.++++
T Consensus        83 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  162 (311)
T 3o26_A           83 DFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEV  162 (311)
T ss_dssp             HHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHH
Confidence            99999999999999999986321                             2345678999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEEeccccccCC----------------------------------------C-CCCCCCChhhHH
Q 023555          143 VCIRMRDANQEGSVINISSIAATSRG----------------------------------------Q-LPGGVAYASSKA  181 (280)
Q Consensus       143 ~~~~~~~~~~~g~vv~vsS~~~~~~~----------------------------------------~-~~~~~~Y~~sK~  181 (280)
                      ++|+|++++ .|+||++||..+....                                        + .++...|++||+
T Consensus       163 ~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          163 LIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             hhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            999997654 6899999998775421                                        0 134568999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCccccc
Q 023555          182 GLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGN  261 (280)
Q Consensus       182 a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~  261 (280)
                      |++.|++.++.++.+  |+||+|+||+|+|++......                 .+|+ +.++.+.+++.......+|.
T Consensus       242 a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~~-----------------~~~~-~~a~~~~~~~~~~~~~~~g~  301 (311)
T 3o26_A          242 CLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIGN-----------------YTAE-EGAEHVVRIALFPDDGPSGF  301 (311)
T ss_dssp             HHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCCS-----------------BCHH-HHHHHHHHHHTCCSSCCCSC
T ss_pred             HHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCCCC-----------------CCHH-HHHHHHHHHHhCCCCCCCce
Confidence            999999999999964  999999999999998754211                 2455 88888888876554555554


Q ss_pred             EE
Q 023555          262 IF  263 (280)
Q Consensus       262 ~i  263 (280)
                      .+
T Consensus       302 ~~  303 (311)
T 3o26_A          302 FY  303 (311)
T ss_dssp             EE
T ss_pred             Ee
Confidence            44

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=3.7e-38  Score=274.53  Aligned_cols=238  Identities=19%  Similarity=0.268  Sum_probs=182.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhh---cCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQ---SGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+...++...+.+...   ...+.++.++.+|++ +.++++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR-DSKSVAAARERV   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT-CHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCC-CHHHHHHHHHHH
Confidence            4799999999999999999999999999998887654443333333221   112246888999999 789999999887


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .  ++++|+||||||+. ...++.+.+.++|++.+++|+.+++.++++++|+|++++ .|+||++||..+..  +.++..
T Consensus        80 ~--~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~--~~~~~~  153 (327)
T 1jtv_A           80 T--EGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM--GLPFND  153 (327)
T ss_dssp             T--TSCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS--CCTTCH
T ss_pred             h--cCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccc--CCCCCh
Confidence            3  58999999999975 345677889999999999999999999999999998654 68999999998876  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh---------h----hhhhhh-cCCCCCCC-CCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD---------W----LNNVAS-RTYPLRDF-GTT  239 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~---------~----~~~~~~-~~~p~~~~-~~~  239 (280)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++........         .    +..... ...|++++ .+|
T Consensus       154 ~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (327)
T 1jtv_A          154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNP  233 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCH
Confidence            99999999999999999999999999999999999999975432110         0    001100 00123444 367


Q ss_pred             hHHHHHHHHHhhcC---CCCcccccEE
Q 023555          240 DPALTSLVRYLVHD---SSEYVSGNIF  263 (280)
Q Consensus       240 ~~~va~~~~~l~s~---~~~~i~G~~i  263 (280)
                      + |+|+.+.|+++.   ...|++|+.+
T Consensus       234 e-dvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          234 E-EVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             H-HHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             H-HHHHHHHHHHcCCCCCeEEEeCchH
Confidence            7 999999999874   4568888754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.4e-36  Score=257.79  Aligned_cols=223  Identities=23%  Similarity=0.342  Sum_probs=187.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHH-hCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .++|++|||||++|||+++++.|++ .|++|++++|+.+.+++..+++...   +.++.++.+|++ +.++++++++++.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~-~~~~~~~~~~~~~   77 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---GLSPRFHQLDID-DLQSIRALRDFLR   77 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---TCCCEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc---CCeeEEEECCCC-CHHHHHHHHHHHH
Confidence            4689999999999999999999999 8999999999998888888887653   236788999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC--C----
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLT-EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR--G----  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~--~----  168 (280)
                      +.++++|+||||||.... . ....+ .+++++.+++|+.+++.+++++++.|++   .|+||++||..+...  .    
T Consensus        78 ~~~g~id~li~~Ag~~~~-~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           78 KEYGGLDVLVNNAGIAFK-V-ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HHHSSEEEEEECCCCCCC-T-TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHH
T ss_pred             HhcCCCCEEEECCccccc-C-CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChh
Confidence            999999999999997632 2 23344 5899999999999999999999998854   479999999766521  0    


Q ss_pred             ----------------------------------CCCCCCCChhhHHHHHHHHHHHHHHhCC----CCeEEEEeecCccc
Q 023555          169 ----------------------------------QLPGGVAYASSKAGLNAMTKCLSLELGV----HKIRVNSICPGLFK  210 (280)
Q Consensus       169 ----------------------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~----~gi~vn~v~pG~v~  210 (280)
                                                        +.| ...|++||++++.|++.++.++++    +||+||+|+||+++
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~  231 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  231 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccc
Confidence                                              112 278999999999999999999987    79999999999999


Q ss_pred             CccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC--CCcccccEEEeCCc
Q 023555          211 SEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS--SEYVSGNIFIVDSG  268 (280)
Q Consensus       211 t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~--~~~i~G~~i~vdgG  268 (280)
                      |++...                 .+..+|+ |+|+.+.||++..  .++++|++|. |++
T Consensus       232 t~~~~~-----------------~~~~~~~-~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          232 TDMAGP-----------------KATKSPE-EGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             STTTCT-----------------TCSBCHH-HHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             cCcCCc-----------------cccCChh-HhhhhHhhhhcCcccccccCceEec-cCc
Confidence            998642                 1245677 9999999999844  4699999887 655

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=6.5e-35  Score=249.61  Aligned_cols=219  Identities=21%  Similarity=0.228  Sum_probs=184.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+++++..+++.+..+  .++.++.+|++ +.++++++++++.
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~-d~~~v~~~~~~~~  101 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--ASAHYIAGTME-DMTFAEQFVAQAG  101 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC--SEEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--CceEEEeCCCC-CHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999988888877765432  36788999999 7899999999999


Q ss_pred             HHcCCccEEEEC-CCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           96 EAFGRIDALVNN-AGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      +.++++|++||| +|.. . ..+.+.+.+++++.+++|+.+++.++++++|.|++.  .|+||++||..+..  +.++..
T Consensus       102 ~~~g~iD~li~naag~~-~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~  175 (286)
T 1xu9_A          102 KLMGGLDMLILNHITNT-S-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKV--AYPMVA  175 (286)
T ss_dssp             HHHTSCSEEEECCCCCC-C-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTS--CCTTCH
T ss_pred             HHcCCCCEEEECCccCC-C-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCccccc--CCCCcc
Confidence            999999999999 5654 2 345567899999999999999999999999999764  58999999998876  567888


Q ss_pred             CChhhHHHHHHHHHHHHHHh--CCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          175 AYASSKAGLNAMTKCLSLEL--GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~--~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      .|++||++++.|+++++.|+  ...||+|++|+||+++|++........          ......+|+ ++|+.+...+.
T Consensus       176 ~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~-~vA~~i~~~~~  244 (286)
T 1xu9_A          176 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKE-ECALEIIKGGA  244 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc----------ccCCCCCHH-HHHHHHHHHHh
Confidence            99999999999999999999  678999999999999999864211110          011234566 99998887775


Q ss_pred             CC
Q 023555          253 DS  254 (280)
Q Consensus       253 ~~  254 (280)
                      ..
T Consensus       245 ~~  246 (286)
T 1xu9_A          245 LR  246 (286)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=4.9e-36  Score=300.74  Aligned_cols=245  Identities=16%  Similarity=0.217  Sum_probs=198.8

Q ss_pred             cCCCCCcEEEEecCCCh-hHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSG-LGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~g-iG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++++||++|||||++| ||+++|+.|++.|++|+++ +|+.+.+++..+++.+..+ .+.++.++.+|++ +.++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVs-d~~sV~al  748 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQG-SKQDVEAL  748 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCC-CHHHHHHH
Confidence            34689999999999998 9999999999999999998 5777777777777644432 2347889999999 78999999


Q ss_pred             HHHHHHH-----cC-CccEEEECCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHHHhcCCCCeEEEE
Q 023555           91 VQKAWEA-----FG-RIDALVNNAGVSGAVK-SPLDLT--EEEWNHIMKTNLTGSWLVSKYV--CIRMRDANQEGSVINI  159 (280)
Q Consensus        91 ~~~~~~~-----~g-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~g~vv~v  159 (280)
                      ++++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++.|++|+.+++.+++++  +|.|.++ +.|+||++
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-~~G~IVnI  826 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPM  826 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-CEEEEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-CCCEEEEE
Confidence            9999988     66 9999999999863 34 677788  8999999999999999999988  6777653 35899999


Q ss_pred             eccccccCCCCCCCCCChhhHHHHHHH-HHHHHHHhCCCCeEEEEeecCccc-CccccCccchhhhhhhhhcCCCCCCCC
Q 023555          160 SSIAATSRGQLPGGVAYASSKAGLNAM-TKCLSLELGVHKIRVNSICPGLFK-SEITEGLMKKDWLNNVASRTYPLRDFG  237 (280)
Q Consensus       160 sS~~~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~~~~~~gi~vn~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (280)
                      ||..+..    ++...|++||+|+++| ++.++.+++++ |+||+|+||+++ |+|....   +....... ..|+ +..
T Consensus       827 SS~ag~~----gg~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~---~~~~~~~~-~~pl-r~~  896 (1887)
T 2uv8_A          827 SPNHGTF----GGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---NIIAEGIE-KMGV-RTF  896 (1887)
T ss_dssp             CSCTTCS----SCBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C---CTTHHHHH-TTSC-CCE
T ss_pred             cChHhcc----CCCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc---hhHHHHHH-hcCC-CCC
Confidence            9988765    2678999999999999 99999999988 999999999999 7876531   11111222 2455 556


Q ss_pred             CChHHHHHHHHHhhcCC-CCcccccEEEeC--CcccCC
Q 023555          238 TTDPALTSLVRYLVHDS-SEYVSGNIFIVD--SGATLP  272 (280)
Q Consensus       238 ~~~~~va~~~~~l~s~~-~~~i~G~~i~vd--gG~~~~  272 (280)
                      +|+ |+|..+.||+++. +.++||+.+.+|  ||+...
T Consensus       897 sPE-EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          897 SQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             EHH-HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             CHH-HHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            788 9999999999987 789999999875  997653

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-36  Score=295.63  Aligned_cols=245  Identities=16%  Similarity=0.220  Sum_probs=200.6

Q ss_pred             cCCCCCcEEEEecCCCh-hHHHHHHHHHHhCCeEEEE-ecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSG-LGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~g-iG~a~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .+++++|++|||||++| ||+++|+.|+++|++|+++ +|+.+.+++..+++.+..+ .+.++.++.+|++ +.++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVT-D~esVeaL  549 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQG-SKQDVEAL  549 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSS-STTHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCC-CHHHHHHH
Confidence            34689999999999998 9999999999999999998 5777666666666643322 2347889999999 78999999


Q ss_pred             HHHHHHH-----cC-CccEEEECCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHHHhcCCCCeEEEE
Q 023555           91 VQKAWEA-----FG-RIDALVNNAGVSGAVK-SPLDLT--EEEWNHIMKTNLTGSWLVSKYV--CIRMRDANQEGSVINI  159 (280)
Q Consensus        91 ~~~~~~~-----~g-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~g~vv~v  159 (280)
                      ++++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++.+++|+.+++.+++++  +|.|.++ +.|+||++
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-ggGrIVnI  627 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPM  627 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-CEEECCCC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-CCCEEEEE
Confidence            9999988     77 9999999999863 34 677777  8999999999999999999998  7888654 35899999


Q ss_pred             eccccccCCCCCCCCCChhhHHHHHHH-HHHHHHHhCCCCeEEEEeecCccc-CccccCccchhhhhhhhhcCCCCCCCC
Q 023555          160 SSIAATSRGQLPGGVAYASSKAGLNAM-TKCLSLELGVHKIRVNSICPGLFK-SEITEGLMKKDWLNNVASRTYPLRDFG  237 (280)
Q Consensus       160 sS~~~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~~~~~~gi~vn~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (280)
                      ||..+..    ++...|++||+|+++| ++.++.+++++ |+||+|+||+++ |++....   +...... ...|+ +..
T Consensus       628 SSiAG~~----Gg~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~---e~~~~~l-~~ipl-R~~  697 (1688)
T 2pff_A          628 SPNHGTF----GGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---NIIAEGI-EKMGV-RTF  697 (1688)
T ss_dssp             CSCTTTS----SCBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT---TTCSTTT-SSSSC-CCC
T ss_pred             EChHhcc----CCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc---hHHHHHH-HhCCC-CCC
Confidence            9988765    2678999999999999 88899999887 999999999999 7875431   1111112 22454 556


Q ss_pred             CChHHHHHHHHHhhcCC-CCcccccEEEeC--CcccCC
Q 023555          238 TTDPALTSLVRYLVHDS-SEYVSGNIFIVD--SGATLP  272 (280)
Q Consensus       238 ~~~~~va~~~~~l~s~~-~~~i~G~~i~vd--gG~~~~  272 (280)
                      +|+ |+|+.+.||+++. +.++||+.+.+|  ||+...
T Consensus       698 sPE-EVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          698 SQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CCC-TTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             CHH-HHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            898 9999999999988 789999999876  997653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=8.9e-35  Score=291.14  Aligned_cols=245  Identities=15%  Similarity=0.183  Sum_probs=198.2

Q ss_pred             CCCCCcEEEEecCCCh-hHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSG-LGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        15 ~~l~~k~vlItG~~~g-iG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++++||++|||||++| ||+++|+.|+++|++|++++ |+.+.+++..+++.+..+ .+.++.++.||++ +.+++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVs-d~esV~alv  726 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQG-SKQDVEALV  726 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCC-CHHHHHHHH
Confidence            3689999999999999 99999999999999999995 666666666666643322 2447889999999 789999999


Q ss_pred             HHHHHH---cC-CccEEEECCCCCCCCCCCCCCC--HHHHHHHHHhhhhHHHHHHHH--HHHHHHhcCCCCeEEEEeccc
Q 023555           92 QKAWEA---FG-RIDALVNNAGVSGAVKSPLDLT--EEEWNHIMKTNLTGSWLVSKY--VCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        92 ~~~~~~---~g-~id~li~~ag~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      +++.+.   +| ++|+||||||+.....++.+.+  .++|++.|++|+.+++.+++.  +++.|.++ +.|+||++||..
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-~~G~IVnISS~a  805 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-PAQVILPLSPNH  805 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-CEEECCEECSCS
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-CCCEEEEEcchh
Confidence            999988   88 9999999999863322777888  899999999999999999877  67777653 358999999988


Q ss_pred             cccCCCCCCCCCChhhHHHHHHHHHHHHH-HhCCCCeEEEEeecCccc-CccccCccchhhhhhhhhcCCCCCCCCCChH
Q 023555          164 ATSRGQLPGGVAYASSKAGLNAMTKCLSL-ELGVHKIRVNSICPGLFK-SEITEGLMKKDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~-~~~~~gi~vn~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      +..    ++...|++||+|+++|++.++. +++++ |+||+|+||+++ |+|...   .+....... ..|+ +..+|+ 
T Consensus       806 g~~----gg~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~---~~~~~~~~~-~~pl-r~~sPe-  874 (1878)
T 2uv9_A          806 GTF----GNDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA---NNLVAEGVE-KLGV-RTFSQQ-  874 (1878)
T ss_dssp             SSS----SCCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH---HHHTHHHHH-TTTC-CCBCHH-
T ss_pred             hcc----CCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc---chhhHHHHH-hcCC-CCCCHH-
Confidence            765    2567999999999999987655 47776 999999999999 998653   111122222 2455 455888 


Q ss_pred             HHHHHHHHhhcCCC-CcccccEEEe--CCcccCC
Q 023555          242 ALTSLVRYLVHDSS-EYVSGNIFIV--DSGATLP  272 (280)
Q Consensus       242 ~va~~~~~l~s~~~-~~i~G~~i~v--dgG~~~~  272 (280)
                      |+|..+.||+++.. .++||+.+.+  |||+...
T Consensus       875 EVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          875 EMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            99999999999887 8999999987  5998754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=6.1e-35  Score=245.03  Aligned_cols=224  Identities=20%  Similarity=0.311  Sum_probs=178.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||+||||++++++|+++|++|++++|+.++++.                .+.+|++ +.+++++++++.   .+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~-~~~~~~~~~~~~---~~   61 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGG-RETAVAAVLDRC---GG   61 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHH-HHHHHHHHHHHH---TT
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcc-cHHHHHHHHHHc---CC
Confidence            689999999999999999999999999999998654211                1567888 667777777643   37


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC----------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ----------  169 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~----------  169 (280)
                      ++|+||||||....        .+++++.+++|+.+++.+++++.+.|++.+ .++||++||..+.....          
T Consensus        62 ~~d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~  132 (255)
T 2dkn_A           62 VLDGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAML  132 (255)
T ss_dssp             CCSEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHH
T ss_pred             CccEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhc
Confidence            89999999997531        123788999999999999999999998643 68999999988764210          


Q ss_pred             --------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCC-CCC
Q 023555          170 --------------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY-PLR  234 (280)
Q Consensus       170 --------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-p~~  234 (280)
                                    .++...|++||++++.+++.++.+++++||++++|+||.+.|++.................. |.+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
T 2dkn_A          133 AGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLG  212 (255)
T ss_dssp             HTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTS
T ss_pred             ccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhc
Confidence                          13556899999999999999999998889999999999999998654311111111221111 778


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ++..++ |+|+++.+++++...+++|+.+.+|||..++.
T Consensus       213 ~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  250 (255)
T 2dkn_A          213 RGSEPR-EVAEAIAFLLGPQASFIHGSVLFVDGGMDALM  250 (255)
T ss_dssp             SCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred             CCCCHH-HHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence            889998 99999999999877799999999999987643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=4.7e-34  Score=231.88  Aligned_cols=200  Identities=20%  Similarity=0.271  Sum_probs=170.3

Q ss_pred             Cc-EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NK-VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k-~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +| ++|||||++|||++++++|+ +|++|++++|+.+                    .+.+|++ +.++++++++.+   
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~-~~~~~~~~~~~~---   56 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDIT-NIDSIKKMYEQV---   56 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTT-CHHHHHHHHHHH---
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecC-CHHHHHHHHHHh---
Confidence            44 79999999999999999999 9999999999863                    3689999 678888887754   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                       +++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++++.+.|++   +++||++||..+..  +.++...|+
T Consensus        57 -~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~--~~~~~~~Y~  129 (202)
T 3d7l_A           57 -GKVDAIVSATGSA-TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMED--PIVQGASAA  129 (202)
T ss_dssp             -CCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTS--CCTTCHHHH
T ss_pred             -CCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcC--CCCccHHHH
Confidence             7899999999975 3456677899999999999999999999999998854   48999999988765  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEY  257 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~  257 (280)
                      ++|++++.+++.++.++ ++||++++|+||++.|++...           ....|..++..|+ |+|+.+.+++   .++
T Consensus       130 ~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~-----------~~~~~~~~~~~~~-dva~~~~~~~---~~~  193 (202)
T 3d7l_A          130 MANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKL-----------EPFFEGFLPVPAA-KVARAFEKSV---FGA  193 (202)
T ss_dssp             HHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHH-----------GGGSTTCCCBCHH-HHHHHHHHHH---HSC
T ss_pred             HHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhh-----------hhhccccCCCCHH-HHHHHHHHhh---hcc
Confidence            99999999999999999 789999999999999987421           1113556677888 9999988877   357


Q ss_pred             ccccEEEeC
Q 023555          258 VSGNIFIVD  266 (280)
Q Consensus       258 i~G~~i~vd  266 (280)
                      ++|+.+++|
T Consensus       194 ~~G~~~~vd  202 (202)
T 3d7l_A          194 QTGESYQVY  202 (202)
T ss_dssp             CCSCEEEEC
T ss_pred             ccCceEecC
Confidence            899999987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.3e-32  Score=224.06  Aligned_cols=201  Identities=19%  Similarity=0.224  Sum_probs=167.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||++|||++++++|+++  +|++++|+.++++...+++.       . .++.+|++ +.+++++++++    ++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-------~-~~~~~D~~-~~~~~~~~~~~----~~   65 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-------A-RALPADLA-DELEAKALLEE----AG   65 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-------C-EECCCCTT-SHHHHHHHHHH----HC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-------C-cEEEeeCC-CHHHHHHHHHh----cC
Confidence            68999999999999999999998  99999999888777666552       1 67889999 77888888876    68


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++|||||.. ...++.+.+.+++++.+++|+.+++.+++++    .+ .+.++||++||..+..  +.++...|+++
T Consensus        66 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~-~~~~~iv~~sS~~~~~--~~~~~~~Y~~s  137 (207)
T 2yut_A           66 PLDLLVHAVGKA-GRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RF-QKGARAVFFGAYPRYV--QVPGFAAYAAA  137 (207)
T ss_dssp             SEEEEEECCCCC-CCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CE-EEEEEEEEECCCHHHH--SSTTBHHHHHH
T ss_pred             CCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hh-cCCcEEEEEcChhhcc--CCCCcchHHHH
Confidence            999999999986 4456677889999999999999999999988    22 3368999999988776  55778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      |++++.+++.++.+++++||++++|+||++.|++...            ...|.+++..|+ |+|+.+.++++....
T Consensus       138 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~-dva~~~~~~~~~~~~  201 (207)
T 2yut_A          138 KGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPE-EAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHH-HHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHH-HHHHHHHHHHhCCCC
Confidence            9999999999999999999999999999999987321            113567788898 999999999976543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=7e-31  Score=241.42  Aligned_cols=220  Identities=15%  Similarity=0.111  Sum_probs=177.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEE-ecCh-------------hHHHHHHHHHHhhcCCCcceEEEEeccC
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAA-ARRV-------------DRLKSLCDEINKQSGSSVRAMAVELDVS   81 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~D~~   81 (280)
                      -++|++|||||++|||+++|+.|+++|++ |+++ +|+.             +.++++.+++.+.   +.++.++.||++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvt  325 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL---GATATVVTCDLT  325 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH---TCEEEEEECCTT
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc---CCEEEEEECCCC
Confidence            46899999999999999999999999998 7787 8883             4556677777654   347899999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           82 ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        82 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                       +.++++++++++. .++++|+||||||+. ....+.+.+.++|++.+++|+.|++++.+++.+.|++++..++||++||
T Consensus       326 -d~~~v~~~~~~i~-~~g~id~vVh~AGv~-~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS  402 (525)
T 3qp9_A          326 -DAEAAARLLAGVS-DAHPLSAVLHLPPTV-DSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS  402 (525)
T ss_dssp             -SHHHHHHHHHTSC-TTSCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred             -CHHHHHHHHHHHH-hcCCCcEEEECCcCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence             7899999999988 789999999999987 4467889999999999999999999999999999876433689999999


Q ss_pred             cccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChH
Q 023555          162 IAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      ..+..  +.+++..|+++|+++++|    +.++..+||++++|+||+++|+|.........+...      -....+|+ 
T Consensus       403 ~a~~~--g~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~------g~~~l~pe-  469 (525)
T 3qp9_A          403 VAAIW--GGAGQGAYAAGTAFLDAL----AGQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRL------GLRPLAPA-  469 (525)
T ss_dssp             GGGTT--CCTTCHHHHHHHHHHHHH----HTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHT------TBCCBCHH-
T ss_pred             HHHcC--CCCCCHHHHHHHHHHHHH----HHHHHhCCCCEEEEECCccccccccchhhHHHHHhc------CCCCCCHH-
Confidence            99887  668899999999999987    456777899999999999999997532211111111      11234677 


Q ss_pred             HHHHHHHHhhcCCC
Q 023555          242 ALTSLVRYLVHDSS  255 (280)
Q Consensus       242 ~va~~~~~l~s~~~  255 (280)
                      ++++.+.++++...
T Consensus       470 e~a~~l~~~l~~~~  483 (525)
T 3qp9_A          470 TALTALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCC
Confidence            89999988887553

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=2.9e-31  Score=277.54  Aligned_cols=242  Identities=18%  Similarity=0.178  Sum_probs=179.8

Q ss_pred             CCCCCcEEEEecCCCh-hHHHHHHHHHHhCCeEEEEecChhH-----HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           15 CQLDNKVVMVTGASSG-LGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        15 ~~l~~k~vlItG~~~g-iG~a~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      ..++||++|||||++| ||+++|+.|++.|++|++++|+.+.     ++++.+++..   .+.++..+.+|++ +.++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~---~G~~~~~v~~Dvt-d~~~v~ 2207 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR---FDATLWVVPANMA-SYSDID 2207 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC---TTCEEEEEECCTT-CHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh---cCCeEEEEEecCC-CHHHHH
Confidence            3589999999999999 9999999999999999999998765     4555555432   2347888999999 789999


Q ss_pred             HHHHHHHH----HcCCccEEEECCCC----CCCCCCCCCCCHHHH----HHHHHhhhhHHHHHHHHHHHHHHhcCCCC--
Q 023555           89 NSVQKAWE----AFGRIDALVNNAGV----SGAVKSPLDLTEEEW----NHIMKTNLTGSWLVSKYVCIRMRDANQEG--  154 (280)
Q Consensus        89 ~~~~~~~~----~~g~id~li~~ag~----~~~~~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~~~~~~~~g--  154 (280)
                      ++++++.+    .+|++|+||||||+    ........+.+.++|    +..+++|+.+++.+++++.+.|.+...++  
T Consensus      2208 ~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~ 2287 (3089)
T 3zen_D         2208 KLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRL 2287 (3089)
T ss_dssp             HHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             HHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence            99999998    89999999999997    211122223333434    44599999999999999999998754222  


Q ss_pred             e-EEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHH--hCCCCeEEEEeecCccc-CccccCccchhhhhhhhhcC
Q 023555          155 S-VINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE--LGVHKIRVNSICPGLFK-SEITEGLMKKDWLNNVASRT  230 (280)
Q Consensus       155 ~-vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~--~~~~gi~vn~v~pG~v~-t~~~~~~~~~~~~~~~~~~~  230 (280)
                      . +++.++..+    ..++...|++||+|+++|+|++|.|  +++ +|+||+|+||+|+ |++....   +........ 
T Consensus      2288 ~ii~~~ss~~g----~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~---~~~~~~~~~- 2358 (3089)
T 3zen_D         2288 HVVLPGSPNRG----MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN---DAIVSAVEE- 2358 (3089)
T ss_dssp             EEEEEECSSTT----SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT---TTTHHHHGG-
T ss_pred             EEEEECCcccc----cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc---hhHHHHHHh-
Confidence            2 222332221    2345678999999999999999999  665 6999999999999 6664321   111111222 


Q ss_pred             CCCCCCCCChHHHHHHHHHhhcCCCCc-ccccEEEeC--CcccC
Q 023555          231 YPLRDFGTTDPALTSLVRYLVHDSSEY-VSGNIFIVD--SGATL  271 (280)
Q Consensus       231 ~p~~~~~~~~~~va~~~~~l~s~~~~~-i~G~~i~vd--gG~~~  271 (280)
                      .+.++ .+|+ |+|..++||+|+.+.+ .+|+.+.+|  ||+..
T Consensus      2359 ~~~r~-~~Pe-EIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2359 AGVTT-YTTD-EMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             GSCBC-EEHH-HHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             cCCCC-CCHH-HHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            34443 3787 9999999999988665 455656665  99854

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.1e-28  Score=236.81  Aligned_cols=180  Identities=18%  Similarity=0.263  Sum_probs=155.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHH-HhCCe-EEEEecC---hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLA-KAGCR-IVAAARR---VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~-~~G~~-v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      -.+|++|||||++|||+++|++|+ ++|++ |++++|+   .+.+++..+++.+.   +.++.++.||++ +.+++++++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---G~~v~~~~~Dvs-d~~~v~~~~  603 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY---GAEVSLQACDVA-DRETLAKVL  603 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHH
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc---CCcEEEEEeecC-CHHHHHHHH
Confidence            368999999999999999999999 79995 9999998   44567777777653   458999999999 789999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP  171 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~  171 (280)
                      +++.+.+ ++|++|||||+. ...++.+++.++|++.+++|+.|++++.+++.|.|       +||++||..+..  +.+
T Consensus       604 ~~~~~~~-~id~lVnnAGv~-~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~--g~~  672 (795)
T 3slk_A          604 ASIPDEH-PLTAVVHAAGVL-DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVL--GSG  672 (795)
T ss_dssp             HTSCTTS-CEEEEEECCCCC-CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHH--TCS
T ss_pred             HHHHHhC-CCEEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcC--CCC
Confidence            9988776 999999999987 44678899999999999999999999999985544       899999999987  678


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~  215 (280)
                      ++..|+++|+    |+++++.+++++||++|+|+||++.|++..
T Consensus       673 g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~  712 (795)
T 3slk_A          673 GQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMA  712 (795)
T ss_dssp             SCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHH
T ss_pred             CCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhh
Confidence            9999999996    556666677777999999999999987643

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=6.4e-28  Score=219.56  Aligned_cols=215  Identities=19%  Similarity=0.206  Sum_probs=167.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh---hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+|++|||||++|||+++|+.|+++|+ +|++++|+.   +..+++.+++.+.   +.++.++.||++ +.+++++++++
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dvt-d~~~v~~~~~~  313 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL---GVRVTIAACDAA-DREALAALLAE  313 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHHHT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc---CCeEEEEEccCC-CHHHHHHHHHH
Confidence            469999999999999999999999999 789999974   3456666666553   348899999999 78999999998


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+. +++|+||||||+.....++.+.+.++|++.+++|+.+++++.+.+.+     ...++||++||..+..  +.+++
T Consensus       314 i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~-----~~~~~iV~~SS~a~~~--g~~g~  385 (496)
T 3mje_A          314 LPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD-----LDLDAFVLFSSGAAVW--GSGGQ  385 (496)
T ss_dssp             CCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT-----SCCSEEEEEEEHHHHT--TCTTC
T ss_pred             HHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc-----cCCCEEEEEeChHhcC--CCCCc
Confidence            8766 79999999999864557788999999999999999999999887633     2368999999999887  66889


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      ..|+++|++++.|++.++    ..||++++|+||++.+.......  .....+.....   ...+|+ +++..+.+++..
T Consensus       386 ~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~--~~~~~l~~~g~---~~l~pe-~~~~~l~~~l~~  455 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDP--EVHDRLVRQGV---LAMEPE-HALGALDQMLEN  455 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC--------CHHHHHTTE---EEECHH-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccCh--HHHHHHHhcCC---CCCCHH-HHHHHHHHHHcC
Confidence            999999999999988655    45999999999988765433211  11111111101   123566 888888887765


Q ss_pred             C
Q 023555          254 S  254 (280)
Q Consensus       254 ~  254 (280)
                      .
T Consensus       456 ~  456 (496)
T 3mje_A          456 D  456 (496)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=7.9e-28  Score=199.81  Aligned_cols=208  Identities=20%  Similarity=0.182  Sum_probs=153.6

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcce-EEEEeccCCCHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRA-MAVELDVSANGAAIENS   90 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~   90 (280)
                      ++.+++++|++|||||+|+||++++++|+++|++|++++|+.++++.+...         .+ .++.+|++         
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~---------~~~~~~~~Dl~---------   75 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER---------GASDIVVANLE---------   75 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT---------TCSEEEECCTT---------
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC---------CCceEEEcccH---------
Confidence            456689999999999999999999999999999999999998877654321         46 77899987         


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                       +.+.+.++++|+||||||....         +++++.+++|+.++.++++++.    +.+ .++||++||..+......
T Consensus        76 -~~~~~~~~~~D~vi~~ag~~~~---------~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~iv~~SS~~~~~~~~~  140 (236)
T 3e8x_A           76 -EDFSHAFASIDAVVFAAGSGPH---------TGADKTILIDLWGAIKTIQEAE----KRG-IKRFIMVSSVGTVDPDQG  140 (236)
T ss_dssp             -SCCGGGGTTCSEEEECCCCCTT---------SCHHHHHHTTTHHHHHHHHHHH----HHT-CCEEEEECCTTCSCGGGS
T ss_pred             -HHHHHHHcCCCEEEECCCCCCC---------CCccccchhhHHHHHHHHHHHH----HcC-CCEEEEEecCCCCCCCCC
Confidence             2333455689999999997521         3578899999999999999883    222 579999999765541100


Q ss_pred             -CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          171 -PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       171 -~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                       +....|+.+|++++.+++       ..|++++.|+||.+.++........      .........+..++ |+|+++.+
T Consensus       141 ~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~------~~~~~~~~~~i~~~-Dva~~~~~  206 (236)
T 3e8x_A          141 PMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTV------SPHFSEITRSITRH-DVAKVIAE  206 (236)
T ss_dssp             CGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEE------ESSCSCCCCCEEHH-HHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEe------ccCCCcccCcEeHH-HHHHHHHH
Confidence             356789999999999876       3589999999999999865432210      00111234566677 99999999


Q ss_pred             hhcCCCCcccccEEEeCCc
Q 023555          250 LVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG  268 (280)
                      +++...  .+|+.+.+++|
T Consensus       207 ~~~~~~--~~g~~~~v~~~  223 (236)
T 3e8x_A          207 LVDQQH--TIGKTFEVLNG  223 (236)
T ss_dssp             HTTCGG--GTTEEEEEEEC
T ss_pred             HhcCcc--ccCCeEEEeCC
Confidence            997543  78999999887

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=1.2e-25  Score=205.05  Aligned_cols=213  Identities=16%  Similarity=0.172  Sum_probs=164.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChh---HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVD---RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      -.++++|||||+||||+++++.|+++|++ |++++|+..   .++++.+++...   +.++.++.||++ +.++++++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dv~-d~~~v~~~~~  299 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVT-DRESVRELLG  299 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc---CCEEEEEEeCCC-CHHHHHHHHH
Confidence            45899999999999999999999999995 999999875   455666666543   347889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++ ..++++|+||||||+. ....+.+.+.+++++.+++|+.+++++.+++.+     .+.++||++||..+..  +.++
T Consensus       300 ~i-~~~g~ld~VIh~AG~~-~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~-----~~~~~~V~~SS~a~~~--g~~g  370 (486)
T 2fr1_A          300 GI-GDDVPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELTRE-----LDLTAFVLFSSFASAF--GAPG  370 (486)
T ss_dssp             TS-CTTSCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT-----SCCSEEEEEEEHHHHT--CCTT
T ss_pred             HH-HhcCCCcEEEECCccC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc-----CCCCEEEEEcChHhcC--CCCC
Confidence            88 5678999999999986 345677889999999999999999999987632     2368999999988876  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc-cccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE-ITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +..|+++|++++.|++.++    .+|+++++|+||++.++ |..... .    .....  .-....+|+ +++..+..++
T Consensus       371 ~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~-~----~~~~~--~g~~~i~~e-~~a~~l~~~l  438 (486)
T 2fr1_A          371 LGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV-A----DRFRR--HGVIEMPPE-TACRALQNAL  438 (486)
T ss_dssp             CTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC-----------------CTT--TTEECBCHH-HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhH-H----HHHHh--cCCCCCCHH-HHHHHHHHHH
Confidence            8999999999999877654    35999999999999876 432111 0    00100  011235666 8998888887


Q ss_pred             cCC
Q 023555          252 HDS  254 (280)
Q Consensus       252 s~~  254 (280)
                      ...
T Consensus       439 ~~~  441 (486)
T 2fr1_A          439 DRA  441 (486)
T ss_dssp             HTT
T ss_pred             hCC
Confidence            644

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=3.8e-25  Score=202.57  Aligned_cols=210  Identities=20%  Similarity=0.253  Sum_probs=164.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChh---HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVD---RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      -.+|++|||||++|||++++++|+++|+ +|++++|+..   .++++.+++...   +.++.++.||++ +.++++++++
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dvt-d~~~v~~~~~  332 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH---GCEVVHAACDVA-ERDALAALVT  332 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT---TCEEEEEECCSS-CHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc---CCEEEEEEeCCC-CHHHHHHHHh
Confidence            3589999999999999999999999999 5999999864   456666666542   347889999999 7888888877


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      .     +++|+||||||+. ....+.+.+.+++++.+++|+.+++++.+.+.+    ....++||++||..+..  +.++
T Consensus       333 ~-----~~ld~VVh~AGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~~V~~SS~a~~~--g~~g  400 (511)
T 2z5l_A          333 A-----YPPNAVFHTAGIL-DDAVIDTLSPESFETVRGAKVCGAELLHQLTAD----IKGLDAFVLFSSVTGTW--GNAG  400 (511)
T ss_dssp             H-----SCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS----CTTCCCEEEEEEGGGTT--CCTT
T ss_pred             c-----CCCcEEEECCccc-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh----ccCCCEEEEEeCHHhcC--CCCC
Confidence            6     6899999999986 345667889999999999999999999887632    11358999999998876  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc-cCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF-KSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      +..|+++|++++.|++.++    ..|+++++|+||++ +|.|...... ..+.   ..   .....+|+ ++++.+..++
T Consensus       401 ~~~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~~-~~~~---~~---g~~~l~~e-~~a~~l~~al  468 (511)
T 2z5l_A          401 QGAYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAGE-ESLS---RR---GLRAMDPD-AAVDALLGAM  468 (511)
T ss_dssp             BHHHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHHH-HHHH---HH---TBCCBCHH-HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccccH-HHHH---hc---CCCCCCHH-HHHHHHHHHH
Confidence            8999999999999998654    46999999999998 7877654211 1111   11   11235677 8888888877


Q ss_pred             cCC
Q 023555          252 HDS  254 (280)
Q Consensus       252 s~~  254 (280)
                      ...
T Consensus       469 ~~~  471 (511)
T 2z5l_A          469 GRN  471 (511)
T ss_dssp             HHT
T ss_pred             hCC
Confidence            543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=1.5e-25  Score=189.63  Aligned_cols=186  Identities=19%  Similarity=0.180  Sum_probs=145.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|++|||||+|+||+++++.|+++|++|++++|++.+.+            ..++.++.+|++ +.++++++++    
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~-d~~~~~~~~~----   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLA-DANAVNAMVA----   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTT-CHHHHHHHHT----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCC-CHHHHHHHHc----
Confidence            45789999999999999999999999999999999875432            236888999999 7777777766    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC---------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR---------  167 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~---------  167 (280)
                         ++|+||||||..         +.++|++.+++|+.+++++++++.    +. +.++||++||..++..         
T Consensus        64 ---~~D~vi~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~a~~----~~-~~~~iv~~SS~~~~g~~~~~~~~~e  126 (267)
T 3rft_A           64 ---GCDGIVHLGGIS---------VEKPFEQILQGNIIGLYNLYEAAR----AH-GQPRIVFASSNHTIGYYPQTERLGP  126 (267)
T ss_dssp             ---TCSEEEECCSCC---------SCCCHHHHHHHHTHHHHHHHHHHH----HT-TCCEEEEEEEGGGGTTSBTTSCBCT
T ss_pred             ---CCCEEEECCCCc---------CcCCHHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEEcchHHhCCCCCCCCCCC
Confidence               799999999973         123468899999999999999983    22 3689999999877631         


Q ss_pred             -CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          168 -GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       168 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                       .+.+....|+.||.+.+.+++.++.++   |+++++|+||.+.++......    ...          +..++ +++..
T Consensus       127 ~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~----~~~----------~~~~~-d~a~~  188 (267)
T 3rft_A          127 DVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM----LST----------WFSHD-DFVSL  188 (267)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH----HHH----------BCCHH-HHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc----eee----------EEcHH-HHHHH
Confidence             133455789999999999999999887   789999999998877543211    111          12344 88888


Q ss_pred             HHHhhcCC
Q 023555          247 VRYLVHDS  254 (280)
Q Consensus       247 ~~~l~s~~  254 (280)
                      +..++...
T Consensus       189 ~~~~~~~~  196 (267)
T 3rft_A          189 IEAVFRAP  196 (267)
T ss_dssp             HHHHHHCS
T ss_pred             HHHHHhCC
Confidence            87777543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=5.7e-26  Score=189.09  Aligned_cols=198  Identities=16%  Similarity=0.153  Sum_probs=147.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +|++|++|||||+|+||++++++|+++|+  +|++++|++++++...         ...+.++.+|++ +.++++++++ 
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~-d~~~~~~~~~-   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFE-KLDDYASAFQ-   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGG-GGGGGGGGGS-
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---------cCCceEEecCcC-CHHHHHHHhc-
Confidence            46789999999999999999999999999  9999999876443211         115677899999 5666665543 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                            ++|++|||||...        ..+++++.+++|+.++..+++++    .+. +.++||++||..+..    +..
T Consensus        84 ------~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~----~~~-~~~~iv~~SS~~~~~----~~~  140 (242)
T 2bka_A           84 ------GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELA----KAG-GCKHFNLLSSKGADK----SSN  140 (242)
T ss_dssp             ------SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHH----HHT-TCCEEEEECCTTCCT----TCS
T ss_pred             ------CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHH----HHC-CCCEEEEEccCcCCC----CCc
Confidence                  7999999999642        12456789999999999888875    333 357999999987653    345


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCe-EEEEeecCcccCccccCccchhhhhhhhhcCCC----CCCCCCChHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKI-RVNSICPGLFKSEITEGLMKKDWLNNVASRTYP----LRDFGTTDPALTSLVR  248 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi-~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~va~~~~  248 (280)
                      ..|+.+|++++.+++.+       ++ ++++|+||.+.|+....... .+.........|    .+++..++ |+|+++.
T Consensus       141 ~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  211 (242)
T 2bka_A          141 FLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG-EWLVRKFFGSLPDSWASGHSVPVV-TVVRAML  211 (242)
T ss_dssp             SHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH-HHHHHHHHCSCCTTGGGGTEEEHH-HHHHHHH
T ss_pred             chHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH-HHHHHHhhcccCccccCCcccCHH-HHHHHHH
Confidence            68999999999988754       45 89999999999986533211 111111112234    45677788 9999999


Q ss_pred             HhhcCCCC
Q 023555          249 YLVHDSSE  256 (280)
Q Consensus       249 ~l~s~~~~  256 (280)
                      +++++...
T Consensus       212 ~~~~~~~~  219 (242)
T 2bka_A          212 NNVVRPRD  219 (242)
T ss_dssp             HHHTSCCC
T ss_pred             HHHhCccc
Confidence            99987654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.92  E-value=2.1e-24  Score=188.21  Aligned_cols=227  Identities=14%  Similarity=0.130  Sum_probs=164.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEE-EeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV-ELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~   94 (280)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.+....+  .++.++ .+|++ +.++++++++  
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~-d~~~~~~~~~--   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDML-KQGAYDEVIK--   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTT-STTTTTTTTT--
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC--CceEEEEecCCc-ChHHHHHHHc--
Confidence            47899999999999999999999999999999999998877666555543322  256677 79998 5555555543  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-C----
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-Q----  169 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-~----  169 (280)
                           ++|+|||+||.....        +++.+.+++|+.++.++++++.+    ..+.+++|++||...+... +    
T Consensus        83 -----~~d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~  145 (342)
T 1y1p_A           83 -----GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAA----TPSVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             -----TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHT----CTTCCEEEEECCGGGTCCCCTTCCC
T ss_pred             -----CCCEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHh----CCCCcEEEEeccHHHhcCCCCCCCC
Confidence                 799999999975321        23567899999999999998843    2235799999997665211 0    


Q ss_pred             ------------------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----chh
Q 023555          170 ------------------------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----KKD  221 (280)
Q Consensus       170 ------------------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----~~~  221 (280)
                                              ..+...|+.||.+.+.+++.++.+++. ++++++++||.+.++......    ...
T Consensus       146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~  224 (342)
T 1y1p_A          146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSG  224 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHH
T ss_pred             cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHH
Confidence                                    012257999999999999999999876 899999999999998754321    111


Q ss_pred             hhhhhhhc-------CCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          222 WLNNVASR-------TYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       222 ~~~~~~~~-------~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                      +.......       ..+.+++..++ |+|+++.+++..  ...+|+.+..+|+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~v~v~-Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          225 WMMSLFNGEVSPALALMPPQYYVSAV-DIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHHTTCCCHHHHTCCSEEEEEHH-HHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHHHcCCCccccccCCcCCEeEHH-HHHHHHHHHHcC--cccCCceEEEeCC
Confidence            12111111       01344567777 999999888754  3457877777765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.92  E-value=3.7e-24  Score=187.51  Aligned_cols=219  Identities=18%  Similarity=0.189  Sum_probs=164.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh-CC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA-GC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~-G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+++|+||||||+|+||++++++|+++ |+ +|++++|++.+.....+++.     ..++.++.+|++ +.++++++++ 
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-----~~~v~~~~~Dl~-d~~~l~~~~~-   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-----DPRMRFFIGDVR-DLERLNYALE-   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-----CTTEEEEECCTT-CHHHHHHHTT-
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-----CCCEEEEECCCC-CHHHHHHHHh-
Confidence            478999999999999999999999999 98 99999999887776665553     136788999999 6666666554 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                            ++|+|||+||....  +   ....+..+.+++|+.++.++++++.+.     +.+++|++||..+..     +.
T Consensus        91 ------~~D~Vih~Aa~~~~--~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~SS~~~~~-----p~  149 (344)
T 2gn4_A           91 ------GVDICIHAAALKHV--P---IAEYNPLECIKTNIMGASNVINACLKN-----AISQVIALSTDKAAN-----PI  149 (344)
T ss_dssp             ------TCSEEEECCCCCCH--H---HHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSS-----CC
T ss_pred             ------cCCEEEECCCCCCC--C---chhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEecCCccCC-----Cc
Confidence                  79999999997521  1   122345678999999999999998552     257999999976543     34


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcC--CC------CCCCCCChHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT--YP------LRDFGTTDPALTS  245 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~p------~~~~~~~~~~va~  245 (280)
                      ..|+.||++.+.+++.++.++++.|+++++|+||.+.++....+  +.+........  .+      .+.+..++ |+++
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i--~~~~~~~~~g~~~~~i~~~~~~r~~i~v~-D~a~  226 (344)
T 2gn4_A          150 NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVV--PFFKKLVQNKASEIPITDIRMTRFWITLD-EGVS  226 (344)
T ss_dssp             SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHH--HHHHHHHHHTCCCEEESCTTCEEEEECHH-HHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHH--HHHHHHHHcCCCceEEeCCCeEEeeEEHH-HHHH
Confidence            68999999999999999998888899999999999988653211  11111111110  11      12345667 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCc
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                      ++.+++...   ..|+++.++++
T Consensus       227 ~v~~~l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          227 FVLKSLKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHHHHHHHC---CSSCEEEECCC
T ss_pred             HHHHHHhhc---cCCCEEecCCC
Confidence            998888643   36888888776

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=7.6e-24  Score=173.97  Aligned_cols=194  Identities=12%  Similarity=0.151  Sum_probs=141.9

Q ss_pred             CcEEEEecCCChhHHHHHHHHH-HhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~-~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|+++||||+|+||+++++.|+ +.|++|++++|+++ +++++.    .   ...++.++.+|++ +.++++++++    
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~---~~~~~~~~~~D~~-d~~~~~~~~~----   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I---DHERVTVIEGSFQ-NPGXLEQAVT----   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H---TSTTEEEEECCTT-CHHHHHHHHT----
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c---CCCceEEEECCCC-CHHHHHHHHc----
Confidence            3789999999999999999999 89999999999987 655443    1   1236888999999 6777777665    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC--
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV--  174 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~--  174 (280)
                         ++|+||||+|..                    |+.     .+.+++.|++.+ .++||++||..+..  ..+...  
T Consensus        73 ---~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~--~~~~~~~~  121 (221)
T 3r6d_A           73 ---NAEVVFVGAMES--------------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSG--EFPVALEK  121 (221)
T ss_dssp             ---TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTS--CSCHHHHH
T ss_pred             ---CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecC--CCCccccc
Confidence               789999999852                    222     678888887644 67999999988765  223322  


Q ss_pred             --------CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChHHHHH
Q 023555          175 --------AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPALTS  245 (280)
Q Consensus       175 --------~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~va~  245 (280)
                              .|+.+|.+++.+++.       .|+++++|+||++.++........      .....+. ++...++ |+|+
T Consensus       122 ~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~------~~~~~~~~~~~~~~~-dvA~  187 (221)
T 3r6d_A          122 WTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYEL------IPEGAQFNDAQVSRE-AVVK  187 (221)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEE------ECTTSCCCCCEEEHH-HHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceee------ccCCccCCCceeeHH-HHHH
Confidence                    799999999987763       589999999999988732211110      0011122 2345566 9999


Q ss_pred             HHHHhh--cCCCCcccccEEEeCCcc
Q 023555          246 LVRYLV--HDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       246 ~~~~l~--s~~~~~i~G~~i~vdgG~  269 (280)
                      .+.+++  ++...++++.....+.+.
T Consensus       188 ~~~~l~~~~~~~~~~~~~~~i~~~~~  213 (221)
T 3r6d_A          188 AIFDILHAADETPFHRTSIGVGEPGT  213 (221)
T ss_dssp             HHHHHHTCSCCGGGTTEEEEEECTTC
T ss_pred             HHHHHHHhcChhhhhcceeeecCCCC
Confidence            999999  887777777555544443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=2.2e-24  Score=186.79  Aligned_cols=222  Identities=15%  Similarity=0.150  Sum_probs=163.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..+.+++|||||+|+||++++++|+++|++|++++|+... +.    +        ++.++.+|++ +.++++++++.  
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--------~~~~~~~Dl~-d~~~~~~~~~~--   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--------NVEMISLDIM-DSQRVKKVISD--   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--------TEEEEECCTT-CHHHHHHHHHH--
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--------eeeEEECCCC-CHHHHHHHHHh--
Confidence            4667899999999999999999999999999999998654 11    1        4677899999 67788777765  


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                         +++|+|||+||....     ..+.+++++.+++|+.++.++++++ +.+.   +.+++|++||...+...       
T Consensus        73 ---~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~---~~~~iv~~SS~~v~g~~~~~~~~~  140 (321)
T 2pk3_A           73 ---IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN---LDCRILTIGSSEEYGMILPEESPV  140 (321)
T ss_dssp             ---HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT---CCCEEEEEEEGGGTBSCCGGGCSB
T ss_pred             ---cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC---CCCeEEEEccHHhcCCCCCCCCCC
Confidence               379999999997521     1122357889999999999999998 5552   25799999998655321       


Q ss_pred             ----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhh-------------cC
Q 023555          169 ----QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVAS-------------RT  230 (280)
Q Consensus       169 ----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~-------------~~  230 (280)
                          +.+....|+.+|.+.+.+++.++.++   |++++.++||.+.++...... ...+......             ..
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  217 (321)
T 2pk3_A          141 SEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNL  217 (321)
T ss_dssp             CTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCS
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCC
Confidence                12345789999999999999999885   899999999999888654311 1111111111             11


Q ss_pred             CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          231 YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       231 ~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+..++..++ |+|+++.+++...   .+|+.+.+++|..++
T Consensus       218 ~~~~~~v~v~-Dva~a~~~~~~~~---~~g~~~~i~~~~~~s  255 (321)
T 2pk3_A          218 EAVRDFTDVR-DIVQAYWLLSQYG---KTGDVYNVCSGIGTR  255 (321)
T ss_dssp             SCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEESCSCEEE
T ss_pred             CcEEeeEEHH-HHHHHHHHHHhCC---CCCCeEEeCCCCCee
Confidence            1234456777 9999999998754   478999999987554

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=6.9e-24  Score=185.40  Aligned_cols=226  Identities=13%  Similarity=0.060  Sum_probs=164.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+..    ..++.++.+|++ +.++++++++..    
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~----~~~~~~~~~Dl~-d~~~~~~~~~~~----   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIR-NKNDVTRLITKY----   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTT-CHHHHHHHHHHH----
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc----CCceEEEEcCCC-CHHHHHHHHhcc----
Confidence            5799999999999999999999999999999853 222233333432    125778899999 677788777652    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----------  168 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----------  168 (280)
                       ++|+|||+||....     +.+.++++..+++|+.++.++++++.+.+.    .+++|++||...+...          
T Consensus        73 -~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~~  142 (347)
T 1orr_A           73 -MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETET  142 (347)
T ss_dssp             -CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECSS
T ss_pred             -CCCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCcccccc
Confidence             79999999997421     123457788999999999999999876542    3699999997654310          


Q ss_pred             ---------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhc
Q 023555          169 ---------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASR  229 (280)
Q Consensus       169 ---------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~  229 (280)
                                     +......|+.+|.+.+.+++.++.++   |+++++|+||.+.++.......    ..+.......
T Consensus       143 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  219 (347)
T 1orr_A          143 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEI  219 (347)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHH
T ss_pred             cccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhC
Confidence                           12245689999999999999999886   7999999999999986532111    1111221111


Q ss_pred             CC----CC---------CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          230 TY----PL---------RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       230 ~~----p~---------~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      ..    |+         ..+..++ |+|+++.+++.. ....+|+.+.++||.
T Consensus       220 ~~~~~~~~~~~g~g~~~~~~i~v~-Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          220 KNGINKPFTISGNGKQVRDVLHAE-DMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HTTCCCCEEEESSSCCEEECEEHH-HHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             cccCCCCeEEecCCcceEeeEEHH-HHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            10    22         1245677 999999998863 346789999999985

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.91  E-value=9.8e-25  Score=189.99  Aligned_cols=225  Identities=17%  Similarity=0.162  Sum_probs=156.2

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+..+++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+       .++.++.+|++ +.+++++++
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-------~~v~~~~~Dl~-d~~~~~~~~   84 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-------AGLSVIEGSVT-DAGLLERAF   84 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-------TTEEEEECCTT-CHHHHHHHH
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-------CCceEEEeeCC-CHHHHHHHH
Confidence            3445889999999999999999999999999999999999654322111111       25778899999 678888877


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC-
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL-  170 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~-  170 (280)
                      +++     ++|+|||+||.....      +.++++  +++|+.++.++++++..    .+ .+++|++||...+..... 
T Consensus        85 ~~~-----~~D~vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~  146 (330)
T 2pzm_A           85 DSF-----KPTHVVHSAAAYKDP------DDWAED--AATNVQGSINVAKAASK----AG-VKRLLNFQTALCYGRPATV  146 (330)
T ss_dssp             HHH-----CCSEEEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHH----HT-CSEEEEEEEGGGGCSCSSS
T ss_pred             hhc-----CCCEEEECCccCCCc------cccChh--HHHHHHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCccC
Confidence            764     799999999975321      345555  99999999999998853    22 579999999876542211 


Q ss_pred             --C------CCCCChhhHHHHHHHHHHHHHHhCCCCeE-EEEeecCcccCccccCccchhhhhh--hhhcCCCCCCCCCC
Q 023555          171 --P------GGVAYASSKAGLNAMTKCLSLELGVHKIR-VNSICPGLFKSEITEGLMKKDWLNN--VASRTYPLRDFGTT  239 (280)
Q Consensus       171 --~------~~~~Y~~sK~a~~~l~~~la~~~~~~gi~-vn~v~pG~v~t~~~~~~~~~~~~~~--~~~~~~p~~~~~~~  239 (280)
                        +      +...|+.+|++++.+++.+  ++....+| ++.+.||. .+.+...+.. .....  ...... ..++..+
T Consensus       147 ~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~-~~~~~~~~~~~~~-~~~~i~~  221 (330)
T 2pzm_A          147 PIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYK-RLKAGQKCFCSDT-VRDFLDM  221 (330)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHH-HHHTTCCCCEESC-EECEEEH
T ss_pred             CCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHH-HHHcCCEEeCCCC-EecceeH
Confidence              2      4578999999999999887  44334556 56666664 3332211100 00000  011111 3456677


Q ss_pred             hHHHHH-HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          240 DPALTS-LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       240 ~~~va~-~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      + |+|+ ++.++++...    |+.+++++|..++
T Consensus       222 ~-Dva~~a~~~~~~~~~----g~~~~v~~~~~~s  250 (330)
T 2pzm_A          222 S-DFLAIADLSLQEGRP----TGVFNVSTGEGHS  250 (330)
T ss_dssp             H-HHHHHHHHHTSTTCC----CEEEEESCSCCEE
T ss_pred             H-HHHHHHHHHHhhcCC----CCEEEeCCCCCCC
Confidence            7 9999 9999987532    8999999987654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=4.9e-24  Score=186.04  Aligned_cols=234  Identities=17%  Similarity=0.147  Sum_probs=165.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +++++|||||+|+||++++++|+++|++|++++|+.+...+..+.+....+  .++.++.+|++ +.++++++++.    
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~-d~~~~~~~~~~----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG--KTPAFHETDVS-DERALARIFDA----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHS--CCCEEECCCTT-CHHHHHHHHHH----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcC--CCceEEEeecC-CHHHHHHHHhc----
Confidence            578999999999999999999999999999999987665555555544332  25778899999 77888887775    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------  168 (280)
                       +++|+|||+||....     ....+...+.+++|+.++..+++++    ++. +.+++|++||...+...         
T Consensus        77 -~~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~  145 (341)
T 3enk_A           77 -HPITAAIHFAALKAV-----GESVAKPIEYYRNNLDSLLSLLRVM----RER-AVKRIVFSSSATVYGVPERSPIDETF  145 (341)
T ss_dssp             -SCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHH----HHT-TCCEEEEEEEGGGBCSCSSSSBCTTS
T ss_pred             -cCCcEEEECcccccc-----CccccChHHHHHHHHHHHHHHHHHH----HhC-CCCEEEEEecceEecCCCCCCCCCCC
Confidence             489999999997521     1123445678899999999887765    333 35799999997655211         


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhh-hcCCCC----
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVA-SRTYPL----  233 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~-~~~~p~----  233 (280)
                      +......|+.||.+.+.+++.++.++.  +++++.++|+.+..+.......          -+++.... ....++    
T Consensus       146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  223 (341)
T 3enk_A          146 PLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFG  223 (341)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEEC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeC
Confidence            112346899999999999999998863  5999999999887764311100          01111111 111111    


Q ss_pred             -----------CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          234 -----------RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       234 -----------~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                                 ..+...+ |+++++.+++........|+.+++.+|..++
T Consensus       224 ~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  272 (341)
T 3enk_A          224 SDYPTPDGTGVRDYIHVV-DLARGHIAALDALERRDASLTVNLGTGRGYS  272 (341)
T ss_dssp             SCSSSTTSSCEECEEEHH-HHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred             CccCCCCCCeeEeeEEHH-HHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence                       1234456 9999998888642234568999999987654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=8.8e-24  Score=184.09  Aligned_cols=226  Identities=13%  Similarity=0.141  Sum_probs=161.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++.    ...++.++.+|++ +.+++++++  
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~----~~~~~~~~~~Dl~-d~~~~~~~~--   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE----DDPRYTFVKGDVA-DYELVKELV--   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT----TCTTEEEEECCTT-CHHHHHHHH--
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc----cCCceEEEEcCCC-CHHHHHHHh--
Confidence            45689999999999999999999997  89999998642  11111 1111    1236788899999 667777666  


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----  168 (280)
                           +++|+|||+||....     +.+.+++++.+++|+.++.++++++.+.    +..+++|++||...+...     
T Consensus        74 -----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~  139 (336)
T 2hun_A           74 -----RKVDGVVHLAAESHV-----DRSISSPEIFLHSNVIGTYTLLESIRRE----NPEVRFVHVSTDEVYGDILKGSF  139 (336)
T ss_dssp             -----HTCSEEEECCCCCCH-----HHHHHCTHHHHHHHHHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCCCSSSCB
T ss_pred             -----hCCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCcEEEEeccHHHHCCCCCCCc
Confidence                 279999999997521     1234567789999999999999998765    224799999997643211     


Q ss_pred             ----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhc-CC-------CCCC
Q 023555          169 ----QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASR-TY-------PLRD  235 (280)
Q Consensus       169 ----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~-~~-------p~~~  235 (280)
                          +.+....|+.+|.+.+.+++.++.++   |++++.++||.+.++..... ....+....... ..       +..+
T Consensus       140 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (336)
T 2hun_A          140 TENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRD  216 (336)
T ss_dssp             CTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceee
Confidence                23345789999999999999999886   79999999999998875321 111122221111 11       1234


Q ss_pred             CCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +..++ |+|+++.+++...   .+|+.+++++|..++
T Consensus       217 ~i~v~-Dva~~~~~~~~~~---~~g~~~~v~~~~~~s  249 (336)
T 2hun_A          217 WLYVE-DHVRAIELVLLKG---ESREIYNISAGEEKT  249 (336)
T ss_dssp             EEEHH-HHHHHHHHHHHHC---CTTCEEEECCSCEEC
T ss_pred             eEEHH-HHHHHHHHHHhCC---CCCCEEEeCCCCccc
Confidence            56677 9999999988643   479999999987554

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=6.1e-24  Score=176.44  Aligned_cols=204  Identities=15%  Similarity=0.148  Sum_probs=140.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+..|++|||||+|+||++++++|+++| ++|++++|++++++..         ....+.++.+|++ +.++++++++  
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~---------~~~~~~~~~~Dl~-d~~~~~~~~~--   87 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP---------YPTNSQIIMGDVL-NHAALKQAMQ--   87 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS---------CCTTEEEEECCTT-CHHHHHHHHT--
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc---------ccCCcEEEEecCC-CHHHHHHHhc--
Confidence            4456899999999999999999999999 8999999998764431         1226788999999 6777777665  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                           .+|+||||+|..         ..              ...++.+++.|++.+ .++||++||...+..  .++..
T Consensus        88 -----~~D~vv~~a~~~---------~~--------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~--~~~~~  136 (236)
T 3qvo_A           88 -----GQDIVYANLTGE---------DL--------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDE--VPGKF  136 (236)
T ss_dssp             -----TCSEEEEECCST---------TH--------------HHHHHHHHHHHHHTT-CCEEEEECCCCC----------
T ss_pred             -----CCCEEEEcCCCC---------ch--------------hHHHHHHHHHHHHcC-CCEEEEEecceecCC--CCccc
Confidence                 689999999852         11              123567778887654 689999999876542  22211


Q ss_pred             ---------CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          175 ---------AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       175 ---------~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                               .+...+...       ...+.+.||++++|+||++.++.......      ........+++..++ |+|+
T Consensus       137 ~~~~~~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~------~~~~~~~~~~~i~~~-DvA~  202 (236)
T 3qvo_A          137 VEWNNAVIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYEL------TSRNEPFKGTIVSRK-SVAA  202 (236)
T ss_dssp             --------CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEE------ECTTSCCSCSEEEHH-HHHH
T ss_pred             ccchhhcccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEE------eccCCCCCCcEECHH-HHHH
Confidence                     111222222       12234679999999999998875432210      111112235667888 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCCCCCCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      ++.+++++...++ |+.+.++++.+....|.|
T Consensus       203 ~i~~ll~~~~~~~-g~~~~i~~~~~~~~~~~~  233 (236)
T 3qvo_A          203 LITDIIDKPEKHI-GENIGINQPGTDGDKPFF  233 (236)
T ss_dssp             HHHHHHHSTTTTT-TEEEEEECSSCCCCSSCC
T ss_pred             HHHHHHcCccccc-CeeEEecCCCCCCCCCCc
Confidence            9999999877666 889999888877766554

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=8.7e-24  Score=184.52  Aligned_cols=230  Identities=15%  Similarity=0.128  Sum_probs=159.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+....  +.+.... ...++.++.+|++ +.++++++++.+  
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~-d~~~~~~~~~~~--   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG-IENDVKIIHMDLL-EFSNIIRTIEKV--   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT-CTTTEEECCCCTT-CHHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc-ccCceeEEECCCC-CHHHHHHHHHhc--
Confidence            468999999999999999999999999999999998654321  1121111 1235778899999 678888887765  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC---------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR---------  167 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~---------  167 (280)
                         ++|+|||+||....     +.+.++++..+++|+.++.++++++.+ +   +..+++|++||...+..         
T Consensus        75 ---~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~---~~~~~iv~~SS~~vyg~~~~~~~~e~  142 (345)
T 2z1m_A           75 ---QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRT-V---KPDTKFYQASTSEMFGKVQEIPQTEK  142 (345)
T ss_dssp             ---CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHH-H---CTTCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ---CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHH-h---CCCceEEEEechhhcCCCCCCCCCcc
Confidence               79999999997521     112346788999999999999999864 2   21379999999764321         


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhC---CCCeEEEEeecCcccCccccCccchhhhhhhhhc--------CCCC-CC
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELG---VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR--------TYPL-RD  235 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~--------~~p~-~~  235 (280)
                      .+.++...|+.||.+.+.+++.++.+++   ..++.++.+.||...|.+...+.  .........        ..+. ..
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  220 (345)
T 2z1m_A          143 TPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT--YSLARIKYGLQDKLVLGNLNAKRD  220 (345)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH--HHHHHHHTTSCSCEEESCTTCEEC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH--HHHHHHHcCCCCeeeeCCCCceee
Confidence            1234557899999999999999999886   33566788889988776532211  111110000        0112 23


Q ss_pred             CCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +..++ |+|+++.++++...    ++.+++.+|..+
T Consensus       221 ~~~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~  251 (345)
T 2z1m_A          221 WGYAP-EYVEAMWLMMQQPE----PDDYVIATGETH  251 (345)
T ss_dssp             CEEHH-HHHHHHHHHHTSSS----CCCEEECCSCCE
T ss_pred             eEEHH-HHHHHHHHHHhCCC----CceEEEeCCCCc
Confidence            66777 99999999987542    356777666543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=2.2e-23  Score=183.32  Aligned_cols=229  Identities=14%  Similarity=0.124  Sum_probs=165.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHh-CCeEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++|||||+|+||+++++.|++. |++|++++|+..  ..+.+ +++.    ...++.++.+|++ +.+++++++++.   
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~----~~~~~~~~~~Dl~-d~~~~~~~~~~~---   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS----ESNRYNFEHADIC-DSAEITRIFEQY---   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT----TCTTEEEEECCTT-CHHHHHHHHHHH---
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh----cCCCeEEEECCCC-CHHHHHHHHhhc---
Confidence            5999999999999999999998 799999998641  22211 1111    1236788999999 677887777652   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCCeEEEEeccccccCC-----
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN----QEGSVINISSIAATSRG-----  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~g~vv~vsS~~~~~~~-----  168 (280)
                        ++|+|||+||....     +.+.+++++.+++|+.++.++++++.+.|..-+    .+++||++||...+...     
T Consensus        73 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~  145 (361)
T 1kew_A           73 --QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             --CCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc
Confidence              89999999997521     223456788999999999999999999875311    13599999996543211     


Q ss_pred             --------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhc-CC-
Q 023555          169 --------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASR-TY-  231 (280)
Q Consensus       169 --------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~-~~-  231 (280)
                                    +.+....|+.+|.+.+.+++.++.++   |++++.|+||.+.++..... ....+....... .. 
T Consensus       146 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  222 (361)
T 1kew_A          146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP  222 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEE
T ss_pred             ccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCce
Confidence                          12345789999999999999999887   79999999999999875321 111122222111 11 


Q ss_pred             ------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 ------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 ------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                            +..++..++ |+|+++.++++..   .+|+.+++++|..++
T Consensus       223 ~~~~~~~~~~~i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~s  265 (361)
T 1kew_A          223 IYGKGDQIRDWLYVE-DHARALHMVVTEG---KAGETYNIGGHNEKK  265 (361)
T ss_dssp             EETTSCCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             EcCCCceeEeeEEHH-HHHHHHHHHHhCC---CCCCEEEecCCCeee
Confidence                  223456677 9999999988643   479999999987543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.91  E-value=5.7e-23  Score=180.24  Aligned_cols=233  Identities=12%  Similarity=0.051  Sum_probs=165.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh----HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD----RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .+++++++|||||+|+||++++++|+++|++|++++|+..    .++.+.+++....  ..++.++.+|++ +.++++++
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~-d~~~~~~~   99 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ--WSNFKFIQGDIR-NLDDCNNA   99 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH--HTTEEEEECCTT-SHHHHHHH
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc--CCceEEEECCCC-CHHHHHHH
Confidence            3577899999999999999999999999999999999753    3333332221100  125778899999 66666666


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++       ++|+|||+||.....     .+.++++..+++|+.++..+++++.+     .+.+++|++||...+.....
T Consensus       100 ~~-------~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~-----~~~~~~v~~SS~~~~~~~~~  162 (352)
T 1sb8_A          100 CA-------GVDYVLHQAALGSVP-----RSINDPITSNATNIDGFLNMLIAARD-----AKVQSFTYAASSSTYGDHPG  162 (352)
T ss_dssp             HT-------TCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHH-----TTCSEEEEEEEGGGGTTCCC
T ss_pred             hc-------CCCEEEECCcccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHH-----cCCCEEEEeccHHhcCCCCC
Confidence            54       799999999974211     13466788999999999999998843     22579999999876542210


Q ss_pred             ---------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhhcCC-----
Q 023555          171 ---------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVASRTY-----  231 (280)
Q Consensus       171 ---------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~-----  231 (280)
                               .....|+.+|.+.+.+++.++.++   |++++.++||.+.++.....     ....+.........     
T Consensus       163 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  239 (352)
T 1sb8_A          163 LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYING  239 (352)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeC
Confidence                     135689999999999999999886   79999999999988764321     01112222221111     


Q ss_pred             ---CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 ---PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 ---p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                         ....+..++ |+|+++.+++.. .....|+.+++.+|..++
T Consensus       240 ~g~~~~~~i~v~-Dva~a~~~~~~~-~~~~~~~~~ni~~~~~~s  281 (352)
T 1sb8_A          240 DGETSRDFCYIE-NTVQANLLAATA-GLDARNQVYNIAVGGRTS  281 (352)
T ss_dssp             SSCCEECCEEHH-HHHHHHHHHHTC-CGGGCSEEEEESCSCCEE
T ss_pred             CCCceEeeEEHH-HHHHHHHHHHhc-cccCCCceEEeCCCCCcc
Confidence               112456676 999988888764 234678999999886543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=9.9e-23  Score=178.28  Aligned_cols=230  Identities=12%  Similarity=0.102  Sum_probs=152.4

Q ss_pred             CCCCCCCCCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEecc
Q 023555            1 MASQVSDCLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV   80 (280)
Q Consensus         1 ~~~~~~~~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   80 (280)
                      |++.-++.++.++..++++|+||||||+|+||+++++.|+++|++|++++|+...               .++.++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl   65 (347)
T 4id9_A            1 MGSSHHHHHHSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSL   65 (347)
T ss_dssp             --------------------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCT
T ss_pred             CCCcccCCCCCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCc
Confidence            4455556666778889999999999999999999999999999999999998654               2567789999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           81 SANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      + +.+++.++++       ++|+|||+|+...       .+.++++..+++|+.++.++++++..     .+.+++|++|
T Consensus        66 ~-d~~~~~~~~~-------~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~-----~~~~~~V~~S  125 (347)
T 4id9_A           66 E-DGQALSDAIM-------GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA-----AGVRRFVFAS  125 (347)
T ss_dssp             T-CHHHHHHHHT-------TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH-----TTCSEEEEEE
T ss_pred             C-CHHHHHHHHh-------CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH-----cCCCeEEEEC
Confidence            9 6666666654       7999999998752       23344588999999999999998733     2357999999


Q ss_pred             ccccccC-----------CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCccc-------------CccccC
Q 023555          161 SIAATSR-----------GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK-------------SEITEG  216 (280)
Q Consensus       161 S~~~~~~-----------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~-------------t~~~~~  216 (280)
                      |...+..           .+......|+.+|.+.+.+++.++.+.   |++++.++|+.+.             .+....
T Consensus       126 S~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~  202 (347)
T 4id9_A          126 SGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFL  202 (347)
T ss_dssp             EGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBH
T ss_pred             CHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCccc
Confidence            9665432           012345689999999999999998884   8999999999987             222110


Q ss_pred             c------------cchhhhhhhhhcCCC---------CCCC----CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          217 L------------MKKDWLNNVASRTYP---------LRDF----GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       217 ~------------~~~~~~~~~~~~~~p---------~~~~----~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .            .-..+..... ...+         ...+    ..++ |+|+++.+++....  ..|+.+++.+|..+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~i~v~-Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          203 RPRIHQQQNFGNAAIAELLQSRD-IGEPSHILARNENGRPFRMHITDTR-DMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHC-CSSCCEEEEECTTCCBCEECEEEHH-HHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             ccccccccccchhHHHHHHHHHH-cCCCeEEeCCCCcccCCccCcEeHH-HHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence            0            0001111111 1111         1223    5566 99999999886542  45889999888655


Q ss_pred             C
Q 023555          272 P  272 (280)
Q Consensus       272 ~  272 (280)
                      +
T Consensus       279 s  279 (347)
T 4id9_A          279 D  279 (347)
T ss_dssp             E
T ss_pred             c
Confidence            3

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.90  E-value=3.2e-23  Score=173.05  Aligned_cols=215  Identities=13%  Similarity=0.011  Sum_probs=150.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +++|++|||||+|+||++++++|+++  |++|++++|+.++.+.+          ..++.++.+|++ +.++++++++  
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~D~~-d~~~~~~~~~--   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----------GGEADVFIGDIT-DADSINPAFQ--   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----------TCCTTEEECCTT-SHHHHHHHHT--
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc----------CCCeeEEEecCC-CHHHHHHHHc--
Confidence            56789999999999999999999999  89999999997665432          124567899999 6677776664  


Q ss_pred             HHHcCCccEEEECCCCCCCCCC--------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           95 WEAFGRIDALVNNAGVSGAVKS--------PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                           ++|++||+||.......        ..+...+++.+.+++|+.++..+++++.+    .+ .+++|++||..+..
T Consensus        69 -----~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~  138 (253)
T 1xq6_A           69 -----GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AG-VKHIVVVGSMGGTN  138 (253)
T ss_dssp             -----TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HT-CSEEEEEEETTTTC
T ss_pred             -----CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cC-CCEEEEEcCccCCC
Confidence                 68999999997532110        01222344456789999999988887743    22 57999999987653


Q ss_pred             CCCCCCC-----CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCCh
Q 023555          167 RGQLPGG-----VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTD  240 (280)
Q Consensus       167 ~~~~~~~-----~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~  240 (280)
                        +.+..     ..|+.+|.+++.+++.       .|+++++|+||.+.++....... .........   +..++..++
T Consensus       139 --~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  206 (253)
T 1xq6_A          139 --PDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ---TDTKTVPRA  206 (253)
T ss_dssp             --TTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGG---SSCCEEEHH
T ss_pred             --CCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcC---CCCcEEcHH
Confidence              22222     2466699999988753       68999999999998876431100 000001111   123456676


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                       |+|+++.+++...  ..+|+.+.+++|.
T Consensus       207 -Dva~~~~~~~~~~--~~~g~~~~i~~~~  232 (253)
T 1xq6_A          207 -DVAEVCIQALLFE--EAKNKAFDLGSKP  232 (253)
T ss_dssp             -HHHHHHHHHTTCG--GGTTEEEEEEECC
T ss_pred             -HHHHHHHHHHcCc--cccCCEEEecCCC
Confidence             9999999998653  2578999998863

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=9.5e-23  Score=179.13  Aligned_cols=233  Identities=16%  Similarity=0.092  Sum_probs=165.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .++++++|||||+|+||++++++|+++|++|++++|+.+......+.+.    ...++.++.+|++ +.+++.++++.. 
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~-d~~~~~~~~~~~-   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIR-DQNKLLESIREF-   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTT-CHHHHHHHHHHH-
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc----cCCceEEEEcccc-CHHHHHHHHHhc-
Confidence            4678999999999999999999999999999999998765444333321    1235778899999 677888877754 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                          ++|+|||+||...     ...+.++++..+++|+.++.++++++.+.    +..+++|++||...+...       
T Consensus        80 ----~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~  146 (357)
T 1rkx_A           80 ----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDKCYDNKEWIWGYR  146 (357)
T ss_dssp             ----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGGGBCCCCSSSCBC
T ss_pred             ----CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEecCHHHhCCCCcCCCCC
Confidence                7999999998631     12245667889999999999999998552    225799999997643211       


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhC------CCCeEEEEeecCcccCccccCc--cchhhhhhhhhcC-C-----
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELG------VHKIRVNSICPGLFKSEITEGL--MKKDWLNNVASRT-Y-----  231 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~------~~gi~vn~v~pG~v~t~~~~~~--~~~~~~~~~~~~~-~-----  231 (280)
                         +..+...|+.+|.+.+.+++.++.++.      +.|++++.++||.+.++.....  .-..+........ .     
T Consensus       147 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~  226 (357)
T 1rkx_A          147 ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNP  226 (357)
T ss_dssp             TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCT
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCC
Confidence               123456899999999999999999885      4589999999999988754210  1111221111111 1     


Q ss_pred             -CCCCCCCChHHHHHHHHHhhcCC--CCcccccEEEeCCc
Q 023555          232 -PLRDFGTTDPALTSLVRYLVHDS--SEYVSGNIFIVDSG  268 (280)
Q Consensus       232 -p~~~~~~~~~~va~~~~~l~s~~--~~~i~G~~i~vdgG  268 (280)
                       ....+...+ |+++++..++...  .....|+.+++.+|
T Consensus       227 ~~~~~~v~v~-Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          227 HAIRPWQHVL-EPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             TCEECCEETH-HHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             CCeeccEeHH-HHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence             112355677 9999888777521  11235678888764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.89  E-value=2.3e-22  Score=162.79  Aligned_cols=199  Identities=14%  Similarity=0.085  Sum_probs=144.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++++++||||+|+||++++++|+++|++|++++|+.++.+..         ...++.++.+|++ +.+++.++++     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~D~~-~~~~~~~~~~-----   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------GPRPAHVVVGDVL-QAADVDKTVA-----   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------SCCCSEEEESCTT-SHHHHHHHHT-----
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc---------cCCceEEEEecCC-CHHHHHHHHc-----
Confidence            348999999999999999999999999999999987654311         0225778899999 6666666654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC----CC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP----GG  173 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~----~~  173 (280)
                        ++|++||++|.....    +.        .++|+.++..+++++.+    .+ .+++|++||.....  ..+    ..
T Consensus        67 --~~d~vi~~a~~~~~~----~~--------~~~n~~~~~~~~~~~~~----~~-~~~~v~~Ss~~~~~--~~~~~~~~~  125 (206)
T 1hdo_A           67 --GQDAVIVLLGTRNDL----SP--------TTVMSEGARNIVAAMKA----HG-VDKVVACTSAFLLW--DPTKVPPRL  125 (206)
T ss_dssp             --TCSEEEECCCCTTCC----SC--------CCHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGTS--CTTCSCGGG
T ss_pred             --CCCEEEECccCCCCC----Cc--------cchHHHHHHHHHHHHHH----hC-CCeEEEEeeeeecc--Ccccccccc
Confidence              689999999875321    11        13677788777776633    22 57999999986654  222    45


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc-cCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF-KSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ..|+.+|.+++.+++.       .+++++.++||.+ .++....+..     . . ...|.+++..++ |+|+++.+++.
T Consensus       126 ~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~-----~-~-~~~~~~~~i~~~-Dva~~~~~~~~  190 (206)
T 1hdo_A          126 QAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTV-----T-L-DGRGPSRVISKH-DLGHFMLRCLT  190 (206)
T ss_dssp             HHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEE-----E-S-SSCSSCSEEEHH-HHHHHHHHTTS
T ss_pred             hhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEe-----c-c-cCCCCCCccCHH-HHHHHHHHHhc
Confidence            6899999999988742       5899999999998 3433221111     0 1 112324667777 99999999987


Q ss_pred             CCCCcccccEEEeCCcc
Q 023555          253 DSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~  269 (280)
                      ..  ..+|+.+.++||+
T Consensus       191 ~~--~~~g~~~~i~~g~  205 (206)
T 1hdo_A          191 TD--EYDGHSTYPSHQY  205 (206)
T ss_dssp             CS--TTTTCEEEEECCC
T ss_pred             Cc--cccccceeeeccc
Confidence            54  3789999999986

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.89  E-value=1.8e-23  Score=171.44  Aligned_cols=192  Identities=19%  Similarity=0.282  Sum_probs=148.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCC-HHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSAN-GAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~g   99 (280)
                      ++|||||+|+||++++++|+++|++|++++|+.++++..           .++.++.+|++ + .+++.++++       
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~-d~~~~~~~~~~-------   62 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVD-WTPEEMAKQLH-------   62 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTT-SCHHHHHTTTT-------
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----------CCceEEEeccc-CCHHHHHHHHc-------
Confidence            699999999999999999999999999999998654321           26888999999 5 666666554       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC-------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG-------  172 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~-------  172 (280)
                      ++|+|||+||....             +.+++|+.++..+++++    ++ .+.+++|++||..+..  +.+.       
T Consensus        63 ~~d~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~----~~-~~~~~iv~~SS~~~~~--~~~~~e~~~~~  122 (219)
T 3dqp_A           63 GMDAIINVSGSGGK-------------SLLKVDLYGAVKLMQAA----EK-AEVKRFILLSTIFSLQ--PEKWIGAGFDA  122 (219)
T ss_dssp             TCSEEEECCCCTTS-------------SCCCCCCHHHHHHHHHH----HH-TTCCEEEEECCTTTTC--GGGCCSHHHHH
T ss_pred             CCCEEEECCcCCCC-------------CcEeEeHHHHHHHHHHH----HH-hCCCEEEEECcccccC--CCccccccccc
Confidence            79999999997531             15778999999888877    23 2357999999987765  2233       


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|+.+|.+.+.+++      ...|++++.|+||.+.++........         ......+..++ |+|+++.+++.
T Consensus       123 ~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~-Dva~~i~~~l~  186 (219)
T 3dqp_A          123 LKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIG-DVADTIKELVM  186 (219)
T ss_dssp             THHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHH-HHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHH-HHHHHHHHHHh
Confidence            5689999999998887      34689999999999988754332210         12445566777 99999999987


Q ss_pred             CCCCcccccEEEeCCcc
Q 023555          253 DSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~  269 (280)
                      ..  ...|+.+.+++|.
T Consensus       187 ~~--~~~g~~~~i~~g~  201 (219)
T 3dqp_A          187 TD--HSIGKVISMHNGK  201 (219)
T ss_dssp             CG--GGTTEEEEEEECS
T ss_pred             Cc--cccCcEEEeCCCC
Confidence            54  3458999997774

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.89  E-value=4.8e-23  Score=178.70  Aligned_cols=240  Identities=14%  Similarity=0.091  Sum_probs=168.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHH-HhCCeEEEEecChh------------HHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRVD------------RLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~-~~G~~v~l~~r~~~------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      ...+|++|||||++|||++++.+|+ ..|+.++++++..+            ..+.+.+.+.+..   .+...+.||++ 
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G---~~a~~i~~Dv~-  122 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG---LYSVTIDGDAF-  122 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT---CCEEEEESCTT-
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC---CCceeEeCCCC-
Confidence            5678999999999999999999999 68999999987543            2344555555543   47889999999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCC------------CC---------------------CCCCCHHHHHHHH
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAV------------KS---------------------PLDLTEEEWNHIM  129 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~------------~~---------------------~~~~~~~~~~~~~  129 (280)
                      +.++++++++++.+.+|++|+||||++.....            ++                     +...+.++++...
T Consensus       123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~  202 (401)
T 4ggo_A          123 SDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV  202 (401)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence            78999999999999999999999999864110            00                     0123556666555


Q ss_pred             Hh---hhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeec
Q 023555          130 KT---NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICP  206 (280)
Q Consensus       130 ~~---n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~p  206 (280)
                      .+   ..++.+...+...+.|.+   ++++|.+|+..+...-+.+....++++|++|+..++.|+.++++  +++|+++|
T Consensus       203 ~vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~  277 (401)
T 4ggo_A          203 KVMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVN  277 (401)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEEC
T ss_pred             HHHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEc
Confidence            54   555666666666666643   68999999987755223334457899999999999999999974  89999999


Q ss_pred             CcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          207 GLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       207 G~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                      |.+.|.....++.-+.+...+-+  -++..++-+ ...+-+..|..+. -|-++....+|+.
T Consensus       278 ~a~vT~AssaIP~~ply~~~l~k--vmk~~g~he-g~ieq~~rl~~~~-ly~~~~~~~~D~~  335 (401)
T 4ggo_A          278 KGLVTRASAVIPVIPLYLASLFK--VMKEKGNHE-GCIEQITRLYAER-LYRKDGTIPVDEE  335 (401)
T ss_dssp             CCCCCTTGGGSSSHHHHHHHHHH--HHHHHTCCC-CHHHHHHHHHHHT-TSCTTCCCCCCTT
T ss_pred             CccccchhhcCCCchHHHHHHHH--HHHhcCCCC-chHHHHHHHHHHh-hccCCCCCCcCCC
Confidence            99999988877654432222111  122223344 5556666666532 2322223445653

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.89  E-value=2.3e-22  Score=175.81  Aligned_cols=234  Identities=16%  Similarity=0.153  Sum_probs=156.2

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++.+++++||||||+|+||++++++|+++|  ++|+..+|......  ...+... ....++.++.+|++ +.+.+.++
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~-~~~~~~~~~~~Dl~-d~~~~~~~   93 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSI-QDHPNYYFVKGEIQ-NGELLEHV   93 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTT-TTCTTEEEEECCTT-CHHHHHHH
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhh-ccCCCeEEEEcCCC-CHHHHHHH
Confidence            3446789999999999999999999999999  67777777542110  0111111 11236888999999 77888888


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--  168 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--  168 (280)
                      ++..     ++|+|||+|+....     ....+++...+++|+.++..+++++.+    . +.+++|++||...+...  
T Consensus        94 ~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~v~~SS~~vy~~~~~  158 (346)
T 4egb_A           94 IKER-----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKK----Y-PHIKLVQVSTDEVYGSLGK  158 (346)
T ss_dssp             HHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHH----S-TTSEEEEEEEGGGGCCCCS
T ss_pred             Hhhc-----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHh----c-CCCEEEEeCchHHhCCCCc
Confidence            7753     69999999997532     124466778999999999999988733    2 35789999997655321  


Q ss_pred             --------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhhcC-CCC-----
Q 023555          169 --------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASRT-YPL-----  233 (280)
Q Consensus       169 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~~-~p~-----  233 (280)
                              +......|+.+|.+.+.+++.++.++   |++++.++||.+..+...... ...+........ .+.     
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGL  235 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSC
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCC
Confidence                    11124689999999999999999886   799999999999887543211 111222221111 111     


Q ss_pred             --CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          234 --RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       234 --~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                        ..+..++ |+|+++.+++....   .|+++++.+|..++
T Consensus       236 ~~~~~i~v~-Dva~a~~~~~~~~~---~g~~~~i~~~~~~s  272 (346)
T 4egb_A          236 NVRDWLHVT-DHCSAIDVVLHKGR---VGEVYNIGGNNEKT  272 (346)
T ss_dssp             CEECEEEHH-HHHHHHHHHHHHCC---TTCEEEECCSCCEE
T ss_pred             eEEeeEEHH-HHHHHHHHHHhcCC---CCCEEEECCCCcee
Confidence              1233456 99999988887543   78999999987543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.89  E-value=1.8e-22  Score=175.92  Aligned_cols=222  Identities=15%  Similarity=0.088  Sum_probs=149.8

Q ss_pred             cccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           12 EPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        12 ~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .++..++++++|||||+|+||++++++|+++|++|++++|+.....+.   +.+    ..++.++.+|++ +.+++++++
T Consensus        14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~----~~~~~~~~~Dl~-d~~~~~~~~   85 (333)
T 2q1w_A           14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD----HPNLTFVEGSIA-DHALVNQLI   85 (333)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC----CTTEEEEECCTT-CHHHHHHHH
T ss_pred             eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh----cCCceEEEEeCC-CHHHHHHHH
Confidence            355578899999999999999999999999999999999975432111   100    025778899999 677777777


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc----C
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS----R  167 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~----~  167 (280)
                      +.     +++|+|||+||.....      +.++++  +++|+.++..+++++.+     .+.++||++||...+.    .
T Consensus        86 ~~-----~~~D~vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~-----~~~~~iV~~SS~~~~g~~~~~  147 (333)
T 2q1w_A           86 GD-----LQPDAVVHTAASYKDP------DDWYND--TLTNCVGGSNVVQAAKK-----NNVGRFVYFQTALCYGVKPIQ  147 (333)
T ss_dssp             HH-----HCCSEEEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHH-----TTCSEEEEEEEGGGGCSCCCS
T ss_pred             hc-----cCCcEEEECceecCCC------ccCChH--HHHHHHHHHHHHHHHHH-----hCCCEEEEECcHHHhCCCccc
Confidence            64     2799999999975321      234444  99999999999998854     2257999999976643    1


Q ss_pred             CC-------CCCCCCChhhHHHHHHHHHH-HHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhc-----CCCCC
Q 023555          168 GQ-------LPGGVAYASSKAGLNAMTKC-LSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR-----TYPLR  234 (280)
Q Consensus       168 ~~-------~~~~~~Y~~sK~a~~~l~~~-la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~-----~~p~~  234 (280)
                      ..       .|....|+.+|.+.+.+++. ++        ++..++|+.+..+.........+.......     ..+..
T Consensus       148 ~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (333)
T 2q1w_A          148 QPVRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARR  219 (333)
T ss_dssp             SSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEE
T ss_pred             CCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceE
Confidence            10       22226899999999999987 55        456777776655541110111111111111     12234


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++..++ |+|+++.+++....    |+.+.+++|..++
T Consensus       220 ~~i~v~-Dva~ai~~~~~~~~----g~~~~v~~~~~~s  252 (333)
T 2q1w_A          220 DFVFVK-DLARATVRAVDGVG----HGAYHFSSGTDVA  252 (333)
T ss_dssp             CEEEHH-HHHHHHHHHHTTCC----CEEEECSCSCCEE
T ss_pred             eeEEHH-HHHHHHHHHHhcCC----CCEEEeCCCCCcc
Confidence            566677 99999999987543    8899999987654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.89  E-value=5.2e-22  Score=173.66  Aligned_cols=221  Identities=14%  Similarity=0.149  Sum_probs=158.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|||||+|+||++++++|+++  |++|++++|+... ..+..+++   .  ..++.++.+|++ +.++++++++    
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~---~--~~~~~~~~~Dl~-d~~~~~~~~~----   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI---L--GDRVELVVGDIA-DAELVDKLAA----   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG---C--SSSEEEEECCTT-CHHHHHHHHT----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh---c--cCCeEEEECCCC-CHHHHHHHhh----
Confidence            68999999999999999999999  8999999996421 11111111   1  136788899999 6666666654    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------  168 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------  168 (280)
                         .+|+|||+||....     +.+.++++..+++|+.++.++++++.+.    +  +++|++||...+...        
T Consensus        75 ---~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~~  140 (348)
T 1oc2_A           75 ---KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLPG  140 (348)
T ss_dssp             ---TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGSTT
T ss_pred             ---cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCcccccccc
Confidence               56999999997521     1234566789999999999999998653    2  499999997643211        


Q ss_pred             -------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhcC----
Q 023555          169 -------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASRT----  230 (280)
Q Consensus       169 -------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~~----  230 (280)
                                   +.+....|+.+|.+.+.+++.++.++   |++++.++||.+.++..... ....+........    
T Consensus       141 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  217 (348)
T 1oc2_A          141 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKL  217 (348)
T ss_dssp             TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEE
T ss_pred             cccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceE
Confidence                         12345689999999999999999887   79999999999988865321 1111222221111    


Q ss_pred             ----CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          231 ----YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       231 ----~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                          .+...+..++ |+|+++.+++...   .+|+.+++++|..+
T Consensus       218 ~~~~~~~~~~i~v~-Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          218 YGEGKNVRDWIHTN-DHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             ETTSCCEEECEEHH-HHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             ecCCCceEeeEEHH-HHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence                1223456677 9999999988643   47999999998654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.89  E-value=3.3e-22  Score=174.43  Aligned_cols=212  Identities=14%  Similarity=0.157  Sum_probs=148.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      .++|||||+|+||++++++|+++|++|++++|+..+.+.+    ..     .++.++.+|++ +.+++.++++       
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~-----~~~~~~~~Dl~-d~~~~~~~~~-------   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY-----LEPECRVAEML-DHAGLERALR-------   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG-----GCCEEEECCTT-CHHHHHHHTT-------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc-----CCeEEEEecCC-CHHHHHHHHc-------
Confidence            3899999999999999999999999999999987654321    11     15678899999 6666666554       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC---------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL---------  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~---------  170 (280)
                      ++|+|||+||...       ...+++++.+++|+.++.++++++.+.     +.+++|++||...+.....         
T Consensus        77 ~~d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~~~~E~~~  144 (342)
T 2x4g_A           77 GLDGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSAYAMPRHPQGLPGHEGLF  144 (342)
T ss_dssp             TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCGGGSCCCTTSSCBCTTCC
T ss_pred             CCCEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHhhCcCCCCCCCCCCCC
Confidence            6999999999642       234567788999999999999998652     2479999999876542111         


Q ss_pred             -CC----CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc-cCccchhhhhhhhhcCCC-----CCCCCCC
Q 023555          171 -PG----GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT-EGLMKKDWLNNVASRTYP-----LRDFGTT  239 (280)
Q Consensus       171 -~~----~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~p-----~~~~~~~  239 (280)
                       ..    ...|+.+|.+.+.+++.++.   . |++++.|+||.+.++.. ... ...+.........+     ...+..+
T Consensus       145 ~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v  219 (342)
T 2x4g_A          145 YDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHYVAGQRNVIDA  219 (342)
T ss_dssp             CSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEEECCEEEEEEH
T ss_pred             CCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccccCCCcceeeH
Confidence             01    56899999999999999886   3 89999999999988765 211 11222222221111     1224566


Q ss_pred             hHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          240 DPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       240 ~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      + |+|+++.+++....   .|+.+.+.+|.
T Consensus       220 ~-Dva~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          220 A-EAGRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             H-HHHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             H-HHHHHHHHHHhCCC---CCceEEEcCCc
Confidence            6 99999999886543   28899999986

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.89  E-value=4.2e-23  Score=216.80  Aligned_cols=177  Identities=16%  Similarity=0.168  Sum_probs=137.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHH---HHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRL---KSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+.   ++..+++...   +.++.++.||++ +.+++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvs-d~~~v~~~~~~ 1958 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ---GVQVLVSTSNAS-SLDGARSLITE 1958 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT---TCEEEEECCCSS-SHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC---CCEEEEEecCCC-CHHHHHHHHHH
Confidence            6899999999999999999999999997 88899986443   3444444432   347888999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +. .++++|+||||||+. ...++.+++.++|++.+++|+.|++++.+++.+.|.+   .|+||++||..+..  +.+++
T Consensus      1959 ~~-~~g~id~lVnnAgv~-~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~--g~~g~ 2031 (2512)
T 2vz8_A         1959 AT-QLGPVGGVFNLAMVL-RDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGR--GNAGQ 2031 (2512)
T ss_dssp             HH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHT--TCTTC
T ss_pred             HH-hcCCCcEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcC--CCCCc
Confidence            87 479999999999986 4467888999999999999999999999999998854   38999999999877  66888


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF  209 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v  209 (280)
                      ..|+++|+++++|++....+    |+...++..|.+
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            99999999999999987765    677777777765

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.88  E-value=4.7e-22  Score=178.99  Aligned_cols=227  Identities=15%  Similarity=0.073  Sum_probs=158.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh---HHHHHHHHHHhhcC------CCcceEEEEeccCCCH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLKSLCDEINKQSG------SSVRAMAVELDVSANG   84 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~---~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~   84 (280)
                      +....+|+||||||+|+||++++++|++.|++|++++|+..   ..+.+.+.+....+      ...++.++.+|++ +.
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~-d~  142 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE-CM  142 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC----
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCC-Cc
Confidence            34567889999999999999999999999999999999876   34444444332210      1236888999998 44


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc
Q 023555           85 AAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA  164 (280)
Q Consensus        85 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~  164 (280)
                      +.+.        .++++|+|||+|+...        ..+++...+++|+.++.++++++.+      ..+++|++||...
T Consensus       143 ~~l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~------~~~~~v~~SS~~~  200 (427)
T 4f6c_A          143 DDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV  200 (427)
T ss_dssp             CCCC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH------TTCEEEEEEEGGG
T ss_pred             ccCC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh------cCCcEEEECchHh
Confidence            4444        4579999999999752        1356778899999999999998855      2579999999876


Q ss_pred             ccCC-----------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch-------
Q 023555          165 TSRG-----------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK-------  220 (280)
Q Consensus       165 ~~~~-----------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~-------  220 (280)
                       ...                 +......|+.+|.+.+.+++.++.    .|++++.|+||.+.++........       
T Consensus       201 -G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~  275 (427)
T 4f6c_A          201 -GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRF  275 (427)
T ss_dssp             -GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHH
T ss_pred             -CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHH
Confidence             110                 022567899999999999998764    589999999999988765432110       


Q ss_pred             -hhhhhhhhc-CCC------CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          221 -DWLNNVASR-TYP------LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       221 -~~~~~~~~~-~~p------~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       ......... ..|      ...+...+ |+|+++.+++....   .|+++.+++|..++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~-DvA~ai~~~~~~~~---~g~~~~l~~~~~~s  331 (427)
T 4f6c_A          276 SMVMNDLLQLDCIGVSMAEMPVDFSFVD-TTARQIVALAQVNT---PQIIYHVLSPNKMP  331 (427)
T ss_dssp             HHHHHHHHHSSEEEHHHHTCEECCEEHH-HHHHHHHHHTTSCC---CCSEEEESCSCCEE
T ss_pred             HHHHHHHHhcCCCCCccccceEEEeeHH-HHHHHHHHHHcCCC---CCCEEEecCCCCCc
Confidence             111111111 111      12245555 99999999887554   88999999987654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.88  E-value=3.4e-22  Score=177.18  Aligned_cols=224  Identities=14%  Similarity=0.068  Sum_probs=159.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++.+++++|||||+|+||++++++|+++|++|++++|+.......         ...++.++.+|++ +.++++++++  
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~v~~~~~Dl~-d~~~~~~~~~--   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---------DMFCDEFHLVDLR-VMENCLKVTE--   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---------GGTCSEEEECCTT-SHHHHHHHHT--
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh---------ccCCceEEECCCC-CHHHHHHHhC--
Confidence            345678999999999999999999999999999999986542211         0125677899999 6676666654  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           ++|+|||+|+.....    ....+++++.+++|+.++.++++++..     .+.+++|++||...+...      
T Consensus        93 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~~V~~SS~~v~~~~~~~~~~  158 (379)
T 2c5a_A           93 -----GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAARI-----NGIKRFFYASSACIYPEFKQLETT  158 (379)
T ss_dssp             -----TCSEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHHH-----TTCSEEEEEEEGGGSCGGGSSSSS
T ss_pred             -----CCCEEEECceecCcc----cccccCHHHHHHHHHHHHHHHHHHHHH-----cCCCEEEEEeehheeCCCCCCCcc
Confidence                 799999999875211    011245678899999999999998732     225699999997654311      


Q ss_pred             ----------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhhcC--C
Q 023555          169 ----------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVASRT--Y  231 (280)
Q Consensus       169 ----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~--~  231 (280)
                                +......|+.+|.+.+.+++.++.++   |++++.|+||.+.++.....     ....+........  .
T Consensus       159 ~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (379)
T 2c5a_A          159 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF  235 (379)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCE
T ss_pred             CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCce
Confidence                      12345689999999999999998876   79999999999988754321     1112222221111  1


Q ss_pred             -------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 -------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 -------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                             ....+..++ |+|+++.+++...    .|+.+++.+|..++
T Consensus       236 ~~~g~g~~~~~~i~v~-Dva~ai~~~l~~~----~~~~~ni~~~~~~s  278 (379)
T 2c5a_A          236 EMWGDGLQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVS  278 (379)
T ss_dssp             EEESCSCCEECCEEHH-HHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred             EEeCCCCeeEEEEEHH-HHHHHHHHHhhcc----CCCeEEeCCCCccC
Confidence                   122455566 9999999988643    46789998886543

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.88  E-value=8.6e-23  Score=176.00  Aligned_cols=220  Identities=11%  Similarity=0.052  Sum_probs=157.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++||||||+|+||++++++|+++|++|++++|+.+......         ...+.++.+|++ +.+ +.++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~-d~~-~~~~~~-------   62 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLK-DYS-WGAGIK-------   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTT-STT-TTTTCC-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccc-cHH-HHhhcC-------
Confidence            47999999999999999999999999999999765432211         225778899998 443 433322       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~  170 (280)
                      . |+|||+|+....     ..+.+++...+++|+.++.++++++..    .+ .+++|++||...+...         +.
T Consensus        63 ~-d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~  131 (312)
T 3ko8_A           63 G-DVVFHFAANPEV-----RLSTTEPIVHFNENVVATFNVLEWARQ----TG-VRTVVFASSSTVYGDADVIPTPEEEPY  131 (312)
T ss_dssp             C-SEEEECCSSCSS-----SGGGSCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             C-CEEEECCCCCCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeCcHHHhCCCCCCCCCCCCCC
Confidence            3 999999996421     234556778899999999999998732    22 5699999997765321         12


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCC---------CCCCCCChH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYP---------LRDFGTTDP  241 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~  241 (280)
                      .+...|+.+|.+.+.+++.++.++   |++++.++||.+.++.........+.........+         ...+..++ 
T Consensus       132 ~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-  207 (312)
T 3ko8_A          132 KPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVR-  207 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHH-
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHH-
Confidence            345789999999999999999987   89999999999998864432112222222221111         12344566 


Q ss_pred             HHHHHHHHhhcC-CCCcccccEEEeCCcccCC
Q 023555          242 ALTSLVRYLVHD-SSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       242 ~va~~~~~l~s~-~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+|+++.+++.. ......|+.+++.+|..++
T Consensus       208 Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s  239 (312)
T 3ko8_A          208 DAVEATLAAWKKFEEMDAPFLALNVGNVDAVR  239 (312)
T ss_dssp             HHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred             HHHHHHHHHHHhccccCCCCcEEEEcCCCcee
Confidence            999999988864 2234578899999886544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.88  E-value=4.5e-22  Score=176.28  Aligned_cols=233  Identities=12%  Similarity=0.092  Sum_probs=156.1

Q ss_pred             CCCCCccc---CCCCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555            7 DCLDLEPW---CQLDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus         7 ~~~~~~~~---~~l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      .+.+++.+   ..++++++|||||+|+||++++++|+++| ++|++++|+.....+.   +.    ...++.++.+|++ 
T Consensus        17 ~~~~m~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~----~~~~v~~~~~Dl~-   88 (377)
T 2q1s_A           17 RGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP----DHPAVRFSETSIT-   88 (377)
T ss_dssp             ---------CCGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC----CCTTEEEECSCTT-
T ss_pred             ccccCCCCCChHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc----CCCceEEEECCCC-
Confidence            34445443   24788999999999999999999999999 9999999976432110   10    1236778899999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                      +.++++++++       ++|+|||+|+....     ..+.+++++.+++|+.++..+++++    .+..+.+++|++||.
T Consensus        89 d~~~l~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~  152 (377)
T 2q1s_A           89 DDALLASLQD-------EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAG  152 (377)
T ss_dssp             CHHHHHHCCS-------CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC
T ss_pred             CHHHHHHHhh-------CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCH
Confidence            6665555443       89999999987421     1234567889999999999999887    222135699999997


Q ss_pred             ccccC-----------C---CC-CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc---------cC--
Q 023555          163 AATSR-----------G---QL-PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT---------EG--  216 (280)
Q Consensus       163 ~~~~~-----------~---~~-~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~---------~~--  216 (280)
                      ..+..           .   +. .....|+.+|.+.+.+++.++.++   |++++.++||.+.++..         ..  
T Consensus       153 ~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~  229 (377)
T 2q1s_A          153 CSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPAT  229 (377)
T ss_dssp             --------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGG
T ss_pred             HHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCccc
Confidence            64321           0   11 345689999999999999998876   79999999999988764         21  


Q ss_pred             ---ccchhhhhhhhhcC-CC-------CCCCCCChHHHHHH-HHHhhcCCCCcccccEEEeCCcccC
Q 023555          217 ---LMKKDWLNNVASRT-YP-------LRDFGTTDPALTSL-VRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       217 ---~~~~~~~~~~~~~~-~p-------~~~~~~~~~~va~~-~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                         .....+........ .+       ...+..++ |+|++ +.+++....   +| .+++.+|..+
T Consensus       230 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~-Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          230 VWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVE-DVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             TSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHH-HHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             ccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHH-HHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence               11111222221111 11       12244466 99999 888886542   78 9999988654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.88  E-value=1.8e-22  Score=174.11  Aligned_cols=218  Identities=14%  Similarity=0.122  Sum_probs=154.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|+||++++++|+++|++|++++|.......   .+      ...+.++.+|++ +.++++++++..     +
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~------~~~~~~~~~Dl~-~~~~~~~~~~~~-----~   66 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV------PKGVPFFRVDLR-DKEGVERAFREF-----R   66 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS------CTTCCEECCCTT-CHHHHHHHHHHH-----C
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc------ccCeEEEECCCC-CHHHHHHHHHhc-----C
Confidence            69999999999999999999999999999985322110   01      014567889999 677777777642     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc-ccccC----C------C
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI-AATSR----G------Q  169 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~-~~~~~----~------~  169 (280)
                      +|++||+|+....     ..+.+++...+++|+.+++++++++.    +. +.+++|++||. ..+..    .      +
T Consensus        67 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~-~~~~iv~~SS~~~~~g~~~~~~~~~E~~~  136 (311)
T 2p5y_A           67 PTHVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACR----QY-GVEKLVFASTGGAIYGEVPEGERAEETWP  136 (311)
T ss_dssp             CSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHH----HT-TCSEEEEEEEHHHHHCCCCTTCCBCTTSC
T ss_pred             CCEEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----Hh-CCCEEEEeCCChhhcCCCCCCCCcCCCCC
Confidence            8999999986421     12456678899999999999999873    22 25799999997 32211    0      1


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcC-------------CC
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRT-------------YP  232 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~-------------~p  232 (280)
                      ..+...|+.||++.+.+++.++.++   |++++.++||.+.++.......    ..+........             .+
T Consensus       137 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  213 (311)
T 2p5y_A          137 PRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGC  213 (311)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCe
Confidence            1235689999999999999999886   7999999999998876432110    11111111110             11


Q ss_pred             CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+.+..++ |+++++.+++...     |+.+++.+|..++
T Consensus       214 ~~~~i~v~-Dva~a~~~~~~~~-----~~~~~i~~~~~~s  247 (311)
T 2p5y_A          214 VRDYVYVG-DVAEAHALALFSL-----EGIYNVGTGEGHT  247 (311)
T ss_dssp             EECEEEHH-HHHHHHHHHHHHC-----CEEEEESCSCCEE
T ss_pred             EEeeEEHH-HHHHHHHHHHhCC-----CCEEEeCCCCCcc
Confidence            22445567 9999998888642     7899999887554

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.88  E-value=1e-21  Score=172.04  Aligned_cols=235  Identities=14%  Similarity=0.089  Sum_probs=165.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCC--CcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS--SVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.+++|+||||||+|+||+++++.|+++|++|++++|+..........+......  ..++.++.+|++ +.+++.++++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIR-DLTTCEQVMK   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTT-CHHHHHHHTT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCC-CHHHHHHHhc
Confidence            3578899999999999999999999999999999999765433333333322110  036888999999 6666666654


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC--
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--  170 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~--  170 (280)
                             ++|+|||+|+....     ....++....+++|+.++.++++++..    . +.+++|++||...+.....  
T Consensus       100 -------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~v~~SS~~vyg~~~~~~  162 (351)
T 3ruf_A          100 -------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKN----A-QVQSFTYAASSSTYGDHPALP  162 (351)
T ss_dssp             -------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEGGGGTTCCCSS
T ss_pred             -------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEecHHhcCCCCCCC
Confidence                   79999999996421     123456778899999999999998732    2 2569999999876532111  


Q ss_pred             -------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhhcC-C------
Q 023555          171 -------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVASRT-Y------  231 (280)
Q Consensus       171 -------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~-~------  231 (280)
                             .....|+.+|.+.+.+++.++.++   |++++.++|+.+..+.....     .-..+........ .      
T Consensus       163 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  239 (351)
T 3ruf_A          163 KVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDG  239 (351)
T ss_dssp             BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSS
T ss_pred             CccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCC
Confidence                   124689999999999999999886   79999999999987754321     0112222222111 1      


Q ss_pred             -CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 -PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 -p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       ....+...+ |+|+++.+++... ....|+.+++.+|..++
T Consensus       240 ~~~~~~i~v~-Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s  279 (351)
T 3ruf_A          240 ETSRDFCYID-NVIQMNILSALAK-DSAKDNIYNVAVGDRTT  279 (351)
T ss_dssp             CCEECCEEHH-HHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred             CeEEeeEEHH-HHHHHHHHHHhhc-cccCCCEEEeCCCCccc
Confidence             112345566 9999988887542 35678999998886543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.88  E-value=3.1e-22  Score=176.28  Aligned_cols=226  Identities=15%  Similarity=0.115  Sum_probs=151.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHH--hCCeEEEEecChhHHHHHH------HHHHhhcCCCcceEEEEeccCCCHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAK--AGCRIVAAARRVDRLKSLC------DEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~--~G~~v~l~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      +++++|+||||||+|+||++++++|++  .|++|++++|+........      ......  ...++.++.+|++ +.++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~-d~~~   82 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADIN-NPLD   82 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTT-CHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCC-CHHH
Confidence            378899999999999999999999999  8999999999654111000      000011  1235678999999 6666


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      ++++      ...++|+|||+||....       +.++++..+++|+.++.++++++    ++ . ++++|++||...+.
T Consensus        83 ~~~~------~~~~~D~vih~A~~~~~-------~~~~~~~~~~~Nv~gt~~ll~aa----~~-~-~~~~V~~SS~~vyg  143 (362)
T 3sxp_A           83 LRRL------EKLHFDYLFHQAAVSDT-------TMLNQELVMKTNYQAFLNLLEIA----RS-K-KAKVIYASSAGVYG  143 (362)
T ss_dssp             HHHH------TTSCCSEEEECCCCCGG-------GCCCHHHHHHHHTHHHHHHHHHH----HH-T-TCEEEEEEEGGGGC
T ss_pred             HHHh------hccCCCEEEECCccCCc-------cccCHHHHHHHHHHHHHHHHHHH----HH-c-CCcEEEeCcHHHhC
Confidence            6665      23589999999996421       33556789999999999999988    22 2 35699999965543


Q ss_pred             CCC--------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhhcC---
Q 023555          167 RGQ--------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVASRT---  230 (280)
Q Consensus       167 ~~~--------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~---  230 (280)
                      ...        ..+...|+.+|.+.+.+++.++.+     +++..|+|+.+..+.....     ....+........   
T Consensus       144 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (362)
T 3sxp_A          144 NTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVK  218 (362)
T ss_dssp             SCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEE
T ss_pred             CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeE
Confidence            211        112345999999999999988766     5667777776665543211     0111111111110   


Q ss_pred             -----CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          231 -----YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       231 -----~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                           .....+..++ |+|+++.+++....   +| .+++.+|..++
T Consensus       219 ~~~~g~~~~~~i~v~-Dva~ai~~~~~~~~---~g-~~~i~~~~~~s  260 (362)
T 3sxp_A          219 LFEFGEQLRDFVYIE-DVIQANVKAMKAQK---SG-VYNVGYSQARS  260 (362)
T ss_dssp             CSGGGCCEEECEEHH-HHHHHHHHHTTCSS---CE-EEEESCSCEEE
T ss_pred             EECCCCeEEccEEHH-HHHHHHHHHHhcCC---CC-EEEeCCCCCcc
Confidence                 1122355577 99999999987542   68 99998886543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.88  E-value=1.2e-21  Score=170.85  Aligned_cols=227  Identities=15%  Similarity=0.148  Sum_probs=150.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..+.... +.+......++.++.+|++ +.++++++++    
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLA-DEGSFDEAIK----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTT-STTTTHHHHT----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCC-CHHHHHHHHc----
Confidence            478999999999999999999999999999999998764433221 1111000125778899999 5666666654    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL------  170 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~------  170 (280)
                         .+|+|||+|+.. .   ....  +..+..+++|+.++.++++++.+..    ..++||++||..+......      
T Consensus        77 ---~~d~Vih~A~~~-~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           77 ---GCTGVFHVATPM-D---FESK--DPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             ---TCSEEEECCCCC-C---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             ---CCCEEEEecccc-C---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHhhcccCCCCCcccC
Confidence               689999999864 1   1111  2235689999999999999886532    1479999999764321110      


Q ss_pred             --------------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhh---hhh-----
Q 023555          171 --------------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN---VAS-----  228 (280)
Q Consensus       171 --------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~---~~~-----  228 (280)
                                    +....|+.||.+.+.+++.++.++   |+++++|+||.+.++.............   ...     
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~  220 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHY  220 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGH
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccc
Confidence                          122359999999999998887654   8999999999999886432221111000   000     


Q ss_pred             cCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          229 RTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       229 ~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                      ...+..++..++ |+++++.+++...  ...|.++..+++
T Consensus       221 ~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~~~~~~~~~~  257 (337)
T 2c29_D          221 SIIRQGQFVHLD-DLCNAHIYLFENP--KAEGRYICSSHD  257 (337)
T ss_dssp             HHHTEEEEEEHH-HHHHHHHHHHHCT--TCCEEEEECCEE
T ss_pred             cccCCCCEEEHH-HHHHHHHHHhcCc--ccCceEEEeCCC
Confidence            001234477788 9999999988642  345655444443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=1.5e-20  Score=167.59  Aligned_cols=182  Identities=15%  Similarity=0.088  Sum_probs=133.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH----------------HHHHHHHhhcCCCcceEEEEec
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK----------------SLCDEINKQSGSSVRAMAVELD   79 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~D   79 (280)
                      ..++++||||||+|+||++++++|+++|++|++++|......                +....+....+  .++.++.+|
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~~D   85 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGD   85 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC--CceEEEECC
Confidence            457889999999999999999999999999999998643321                11111111111  257788999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 023555           80 VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI  159 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~v  159 (280)
                      ++ +.++++++++..     ++|+|||+||.....  ....+.+++...+++|+.++.++++++.+.    +...++|++
T Consensus        86 l~-d~~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~  153 (404)
T 1i24_A           86 IC-DFEFLAESFKSF-----EPDSVVHFGEQRSAP--YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKL  153 (404)
T ss_dssp             TT-SHHHHHHHHHHH-----CCSEEEECCSCCCHH--HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEE
T ss_pred             CC-CHHHHHHHHhcc-----CCCEEEECCCCCCcc--chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEe
Confidence            99 677788777754     699999999975221  112256777889999999999999988542    212599999


Q ss_pred             eccccccCC----------------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc
Q 023555          160 SSIAATSRG----------------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT  214 (280)
Q Consensus       160 sS~~~~~~~----------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~  214 (280)
                      ||...+...                      +......|+.||.+.+.+++.++.++   |+++++|+||.+.++..
T Consensus       154 SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          154 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             CcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            997654311                      22235679999999999999999887   89999999999988754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.87  E-value=1.6e-21  Score=168.18  Aligned_cols=217  Identities=12%  Similarity=0.107  Sum_probs=152.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+||||||+|+||++++++|+++|..|++..++....+..          ...+.++.+|++ + +++.++++       
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~Dl~-~-~~~~~~~~-------   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV----------NEAARLVKADLA-A-DDIKDYLK-------   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS----------CTTEEEECCCTT-T-SCCHHHHT-------
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc----------CCCcEEEECcCC-h-HHHHHHhc-------
Confidence            5799999999999999999999995555555544322211          225778899998 5 66666554       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~  170 (280)
                      ++|++||+|+....     ..+.++++..+++|+.++.++++++.    +.+ .+++|++||...+...         +.
T Consensus        63 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~  132 (313)
T 3ehe_A           63 GAEEVWHIAANPDV-----RIGAENPDEIYRNNVLATYRLLEAMR----KAG-VSRIVFTSTSTVYGEAKVIPTPEDYPT  132 (313)
T ss_dssp             TCSEEEECCCCCCC-----C-CCCCHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEECCGGGGCSCSSSSBCTTSCC
T ss_pred             CCCEEEECCCCCCh-----hhhhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEeCchHHhCcCCCCCCCCCCCC
Confidence            79999999986421     23445678899999999999998853    323 5799999997665311         22


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCC---------CCCCCCCChH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY---------PLRDFGTTDP  241 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~~  241 (280)
                      .+...|+.+|.+.+.+++.++.++   |++++.++|+.+..+....-.-..+.........         ....+..++ 
T Consensus       133 ~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-  208 (313)
T 3ehe_A          133 HPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYIS-  208 (313)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHH-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHH-
Confidence            345689999999999999999886   8999999999998875432111122222221111         123455566 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++++.+++.   ....|+.+++.+|..++
T Consensus       209 Dva~a~~~~~~---~~~~~~~~ni~~~~~~s  236 (313)
T 3ehe_A          209 DCVDAMLFGLR---GDERVNIFNIGSEDQIK  236 (313)
T ss_dssp             HHHHHHHHHTT---CCSSEEEEECCCSCCEE
T ss_pred             HHHHHHHHHhc---cCCCCceEEECCCCCee
Confidence            99999999887   33468899999886544

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.87  E-value=6.1e-21  Score=169.07  Aligned_cols=230  Identities=13%  Similarity=0.086  Sum_probs=154.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-----HHHHHHHHHhhcCCCc-ceEEEEeccCCCHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKQSGSSV-RAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |+||||||+|+||+++++.|+++|++|++++|+.+.     ++.+...+..   ... ++.++.+|++ +.+++.++++.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~-d~~~~~~~~~~  104 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN---VNKALMKLHYADLT-DASSLRRWIDV  104 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTT-CHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc---ccccceEEEECCCC-CHHHHHHHHHh
Confidence            789999999999999999999999999999997643     2222111110   011 5678899999 67788877776


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----  168 (280)
                      +     ++|+|||+||....     ..+.++++..+++|+.++..+++++.+...++++.+++|++||...+...     
T Consensus       105 ~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~  174 (381)
T 1n7h_A          105 I-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS  174 (381)
T ss_dssp             H-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBC
T ss_pred             c-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCC
Confidence            5     78999999997521     12356788899999999999999999887654445799999997754311     


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcccc-Cccc---hhhhhhhhhc---------CCC
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITE-GLMK---KDWLNNVASR---------TYP  232 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~-~~~~---~~~~~~~~~~---------~~p  232 (280)
                         +..+...|+.+|.+.+.+++.++.++   ++.+..+.|..+..+... ....   ..+.......         ..+
T Consensus       175 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  251 (381)
T 1n7h_A          175 ETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA  251 (381)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTC
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCc
Confidence               22345789999999999999999887   344433333322221110 0000   0111111111         012


Q ss_pred             CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ...+..++ |+|+++.+++....    ++.+++.+|..+
T Consensus       252 ~~~~v~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          252 SRDWGFAG-DYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             EEECEEHH-HHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             eeeeEEHH-HHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence            23466677 99999999987542    468888888654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.87  E-value=1.8e-21  Score=168.33  Aligned_cols=222  Identities=18%  Similarity=0.161  Sum_probs=142.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+..+.. ..+.+..+...++.++.+|++ +.++++++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLS-NPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTT-CGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCC-CHHHHHHHHc-----
Confidence            689999999999999999999999999999888 64321110 011110000125677889999 6677766654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHH-HHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEE-WNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL------  170 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~------  170 (280)
                        .+|+|||+|+..       ....++ +++.+++|+.+++++++++.+.    .+.+++|++||..+....+.      
T Consensus        74 --~~d~vih~A~~~-------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~  140 (322)
T 2p4h_X           74 --GCVGIFHTASPI-------DFAVSEPEEIVTKRTVDGALGILKACVNS----KTVKRFIYTSSGSAVSFNGKDKDVLD  140 (322)
T ss_dssp             --TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTC----SSCCEEEEEEEGGGTSCSSSCCSEEC
T ss_pred             --CCCEEEEcCCcc-------cCCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccHHHcccCCCCCeecC
Confidence              689999999642       111222 3568999999999999988432    12579999999775321110      


Q ss_pred             --------------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh--hhhhhhh-c--CC
Q 023555          171 --------------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD--WLNNVAS-R--TY  231 (280)
Q Consensus       171 --------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~--~~~~~~~-~--~~  231 (280)
                                    |....|+.||.+.+.+++.++.+   +|+++++++||.+.++.........  ....... .  ..
T Consensus       141 e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~  217 (322)
T 2p4h_X          141 ESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI  217 (322)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC
T ss_pred             CccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC
Confidence                          01115999999888887776654   4899999999999998754321111  0101111 0  01


Q ss_pred             CCC--CCCCChHHHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          232 PLR--DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       232 p~~--~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      +..  ++..++ |+|+++.+++...  ..+|+ +++.+
T Consensus       218 ~~~~~~~i~v~-Dva~a~~~~~~~~--~~~g~-~~~~~  251 (322)
T 2p4h_X          218 GVTRFHMVHVD-DVARAHIYLLENS--VPGGR-YNCSP  251 (322)
T ss_dssp             CEEEEEEEEHH-HHHHHHHHHHHSC--CCCEE-EECCC
T ss_pred             cCCCcCEEEHH-HHHHHHHHHhhCc--CCCCC-EEEcC
Confidence            111  366777 9999999998643  25776 44543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.87  E-value=6.3e-22  Score=173.91  Aligned_cols=226  Identities=14%  Similarity=0.125  Sum_probs=151.5

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+.+++++++|||||+|+||++++++|+++| ++|++++|+.....  ...+     .  .+. +.+|++ +.+.+++++
T Consensus        40 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~-----~--~~~-~~~d~~-~~~~~~~~~  108 (357)
T 2x6t_A           40 GGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL-----V--DLN-IADYMD-KEDFLIQIM  108 (357)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT-----T--TSC-CSEEEE-HHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc-----c--Cce-EeeecC-cHHHHHHHH
Confidence            4556788999999999999999999999999 89999999764321  0111     0  111 567887 556666655


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC-
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL-  170 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~-  170 (280)
                      +.  ..++++|+|||+||....       +.+++++.+++|+.++.++++++.+    .+ . ++|++||...+..... 
T Consensus       109 ~~--~~~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~-r~V~~SS~~v~g~~~~~  173 (357)
T 2x6t_A          109 AG--EEFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSD  173 (357)
T ss_dssp             TT--CCCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGCSCSSC
T ss_pred             hh--cccCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEcchHHhCCCCCC
Confidence            42  124579999999997532       2234677899999999999998854    23 4 9999999876532110 


Q ss_pred             --------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhhcC-C-----
Q 023555          171 --------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVASRT-Y-----  231 (280)
Q Consensus       171 --------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~-~-----  231 (280)
                              .....|+.+|.+.+.+++.++.++   |++++.|+||.+.++.....     .-..+........ .     
T Consensus       174 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (357)
T 2x6t_A          174 FIESREYEKPLNVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEG  250 (357)
T ss_dssp             CCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETT
T ss_pred             CcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCC
Confidence                    125689999999999999998764   89999999999987753210     0011111111111 1     


Q ss_pred             --C-CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 --P-LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 --p-~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                        + ...+..++ |+|+++.+++....    |+.+++.+|..++
T Consensus       251 ~~~~~~~~i~v~-Dva~ai~~~~~~~~----~~~~~i~~~~~~s  289 (357)
T 2x6t_A          251 SENFKRDFVYVG-DVADVNLWFLENGV----SGIFNLGTGRAES  289 (357)
T ss_dssp             GGGCEECEEEHH-HHHHHHHHHHHHCC----CEEEEESCSCCEE
T ss_pred             CCcceEccEEHH-HHHHHHHHHHhcCC----CCeEEecCCCccc
Confidence              1 23445666 99999999886543    7899998886543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.87  E-value=4.5e-21  Score=167.70  Aligned_cols=233  Identities=17%  Similarity=0.136  Sum_probs=155.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH------HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR------LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+++.+..+  .++.++.+|++ +.++++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~-~~~~~~~~~~   78 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG--RSVEFEEMDIL-DQGALQRLFK   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT--CCCEEEECCTT-CHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccC--CceEEEECCCC-CHHHHHHHHH
Confidence            5799999999999999999999999999999885322      1122222322111  25678899999 6777777766


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----  168 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----  168 (280)
                      ..     ++|+|||+||.....     .+.+++++.+++|+.++.++++++    .+. +.+++|++||...+...    
T Consensus        79 ~~-----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~SS~~~~g~~~~~~  143 (348)
T 1ek6_A           79 KY-----SFMAVIHFAGLKAVG-----ESVQKPLDYYRVNLTGTIQLLEIM----KAH-GVKNLVFSSSATVYGNPQYLP  143 (348)
T ss_dssp             HC-----CEEEEEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHH----HHT-TCCEEEEEEEGGGGCSCSSSS
T ss_pred             hc-----CCCEEEECCCCcCcc-----chhhchHHHHHHHHHHHHHHHHHH----HHh-CCCEEEEECcHHHhCCCCCCC
Confidence            42     799999999975211     134567889999999999998875    232 35799999997665311    


Q ss_pred             -----C-CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc----------cchhhhhhhhh-cCC
Q 023555          169 -----Q-LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL----------MKKDWLNNVAS-RTY  231 (280)
Q Consensus       169 -----~-~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~----------~~~~~~~~~~~-~~~  231 (280)
                           + .|....|+.+|.+.+.+++.++.+  ..++++..++|+.+..+.....          .--..+..... ...
T Consensus       144 ~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~  221 (348)
T 1ek6_A          144 LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRRE  221 (348)
T ss_dssp             BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSS
T ss_pred             cCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCC
Confidence                 1 123678999999999999999987  3469999999998876531000          00011111111 111


Q ss_pred             ---------------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 ---------------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 ---------------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                                     ....+...+ |+++++..++........++.+++.+|..++
T Consensus       222 ~~~~~g~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s  276 (348)
T 1ek6_A          222 ALNVFGNDYDTEDGTGVRDYIHVV-DLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (348)
T ss_dssp             CEEEECSCSSSSSSSCEECEEEHH-HHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             CeEEeCCcccCCCCceEEeeEEHH-HHHHHHHHHHhcccccCCceEEEeCCCCCcc
Confidence                           112344566 9999888877532112224889998776543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.87  E-value=3e-21  Score=168.20  Aligned_cols=222  Identities=18%  Similarity=0.219  Sum_probs=156.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHh---C---CeEEEEecChhH--HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKA---G---CRIVAAARRVDR--LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~---G---~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++|||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+.    ...++.++.+|++ +.+++++++ 
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~----~~~~~~~~~~Dl~-d~~~~~~~~-   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD----ADPRLRFVHGDIR-DAGLLAREL-   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT----TCTTEEEEECCTT-CHHHHHHHT-
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc----cCCCeEEEEcCCC-CHHHHHHHh-
Confidence            6999999999999999999997   8   999999986421  1111 1111    1236788999999 666666555 


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----  168 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----  168 (280)
                            +++|+|||+||....     +.+.+++++.+++|+.++.++++++.+.     ..+++|++||...+...    
T Consensus        75 ------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~SS~~vyg~~~~~~  138 (337)
T 1r6d_A           75 ------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSIDSGS  138 (337)
T ss_dssp             ------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCSSSC
T ss_pred             ------cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecchHHhCCCCCCC
Confidence                  489999999987521     1234566788999999999999988542     24699999997654311    


Q ss_pred             -----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhc-CCC-------CC
Q 023555          169 -----QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASR-TYP-------LR  234 (280)
Q Consensus       169 -----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~-~~p-------~~  234 (280)
                           +..+...|+.+|.+.+.+++.++.++   |++++.++||.+.++..... ....+....... ..+       ..
T Consensus       139 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (337)
T 1r6d_A          139 WTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR  215 (337)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEE
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeE
Confidence                 22345789999999999999999886   79999999999988764321 111122221111 111       12


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+..++ |+++++.+++...   .+|+.+++++|..++
T Consensus       216 ~~i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~s  249 (337)
T 1r6d_A          216 EWVHTD-DHCRGIALVLAGG---RAGEIYHIGGGLELT  249 (337)
T ss_dssp             EEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             eeEeHH-HHHHHHHHHHhCC---CCCCEEEeCCCCCcc
Confidence            345566 9999998888643   378999999987543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.86  E-value=9.8e-22  Score=173.57  Aligned_cols=231  Identities=13%  Similarity=0.163  Sum_probs=158.4

Q ss_pred             CCcccCCCCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           10 DLEPWCQLDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        10 ~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      ...-+..|++|+||||||+|+||++++++|+++ |++|++++|+.++......        ..++.++.+|++++.+.+.
T Consensus        15 ~~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--------~~~v~~~~~Dl~~d~~~~~   86 (372)
T 3slg_A           15 QTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--------HERMHFFEGDITINKEWVE   86 (372)
T ss_dssp             --------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--------STTEEEEECCTTTCHHHHH
T ss_pred             hhcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--------CCCeEEEeCccCCCHHHHH
Confidence            334455688899999999999999999999999 9999999998765443211        1368889999984456666


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++++       ++|+|||+|+.....     ...++..+.+++|+.++.++++++..    .+  +++|++||...+...
T Consensus        87 ~~~~-------~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~v~~SS~~vyg~~  148 (372)
T 3slg_A           87 YHVK-------KCDVILPLVAIATPA-----TYVKQPLRVFELDFEANLPIVRSAVK----YG--KHLVFPSTSEVYGMC  148 (372)
T ss_dssp             HHHH-------HCSEEEECBCCCCHH-----HHHHCHHHHHHHHTTTTHHHHHHHHH----HT--CEEEEECCGGGGBSC
T ss_pred             HHhc-------cCCEEEEcCccccHH-----HHhhCHHHHHHHHHHHHHHHHHHHHH----hC--CcEEEeCcHHHhCCC
Confidence            6665       589999999975321     12345667899999999998888732    22  699999997554321


Q ss_pred             CC----------------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhh
Q 023555          169 QL----------------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWL  223 (280)
Q Consensus       169 ~~----------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~  223 (280)
                      ..                .....|+.+|.+.+.+++.++.+    |++++.++|+.+..+......         -..+.
T Consensus       149 ~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~  224 (372)
T 3slg_A          149 ADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFL  224 (372)
T ss_dssp             CCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHH
T ss_pred             CCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHH
Confidence            10                12236999999999999998865    899999999999877543211         01111


Q ss_pred             hhhhhcC-C-------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCC-cccC
Q 023555          224 NNVASRT-Y-------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDS-GATL  271 (280)
Q Consensus       224 ~~~~~~~-~-------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdg-G~~~  271 (280)
                      ....... .       ....+...+ |+|+++.+++........|+++++.+ |..+
T Consensus       225 ~~~~~~~~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~  280 (372)
T 3slg_A          225 GHIVRGENISLVDGGSQKRAFTYVD-DGISALMKIIENSNGVATGKIYNIGNPNNNF  280 (372)
T ss_dssp             HHHHHTCCEEEGGGGCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred             HHHHcCCCcEEeCCCceEEEEEEHH-HHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence            1111111 1       112345566 99999999887654446789999988 5443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.86  E-value=2.1e-21  Score=167.53  Aligned_cols=214  Identities=16%  Similarity=0.145  Sum_probs=124.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||+|+||++++++|+++|++|++++|+...            +   .  ++.+|++ +.+++.++++..    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~---~--~~~~Dl~-d~~~~~~~~~~~----   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P---K--FEQVNLL-DSNAVHHIIHDF----   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------CHHHHHHH----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C---C--eEEecCC-CHHHHHHHHHhh----
Confidence            6899999999999999999999999999999987533            0   1  5678998 667777777654    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------CC
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------QL  170 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------~~  170 (280)
                       ++|+|||+||....     ..+.+++++.+++|+.++.++++++.+    .  ++++|++||...+...        +.
T Consensus        60 -~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~v~~~~~~~~~E~~~~  127 (315)
T 2ydy_A           60 -QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAA----V--GAFLIYISSDYVFDGTNPPYREEDIP  127 (315)
T ss_dssp             -CCSEEEECC------------------------CHHHHHHHHHHHH----H--TCEEEEEEEGGGSCSSSCSBCTTSCC
T ss_pred             -CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEchHHHcCCCCCCCCCCCCC
Confidence             79999999997532     224567788999999999999998854    2  2599999998765420        12


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhh-h------cCCCCCCCCCChHHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVA-S------RTYPLRDFGTTDPAL  243 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~-~------~~~p~~~~~~~~~~v  243 (280)
                      .+...|+.+|.+.+.+++.++.++  ..+|++.|. |...++.. .... ....... .      ...+..++..++ |+
T Consensus       128 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dv  201 (315)
T 2ydy_A          128 APLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEE-SAVT-VMFDKVQFSNKSANMDHWQQRFPTHVK-DV  201 (315)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGG-STTG-GGHHHHHCCSSCEEEECSSBBCCEEHH-HH
T ss_pred             CCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccc-cHHH-HHHHHHHhcCCCeeeccCceECcEEHH-HH
Confidence            345689999999999999875433  234544444 44433110 1111 1111111 0      112345566777 99


Q ss_pred             HHHHHHhhcCC-CCcccccEEEeCCcccCC
Q 023555          244 TSLVRYLVHDS-SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       244 a~~~~~l~s~~-~~~i~G~~i~vdgG~~~~  272 (280)
                      |+++.+++... .....|+.+++.+|..++
T Consensus       202 a~a~~~~~~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          202 ATVCRQLAEKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             HHHHHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred             HHHHHHHHHhhccccCCCCeEEEcCCCccc
Confidence            99998888642 223568899999987654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.86  E-value=4e-21  Score=167.65  Aligned_cols=220  Identities=12%  Similarity=0.113  Sum_probs=154.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++|||||+|+||++++++|+++ |++|++++|+..+.+...        ...++.++.+|+++..+.++++++      
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYHVK------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------TCTTEEEEECCTTTCSHHHHHHHH------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh--------cCCCeEEEeccccCcHHHHHhhcc------
Confidence            47999999999999999999998 899999999876543211        122577889999843445555554      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC--------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--------  170 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~--------  170 (280)
                       ++|+|||+||...+.     ...++++..+++|+.++.++++++.+     . ++++|++||...+.....        
T Consensus        67 -~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~-~~~~v~~SS~~v~g~~~~~~~~e~~~  134 (345)
T 2bll_A           67 -KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVK-----Y-RKRIIFPSTSEVYGMCSDKYFDEDHS  134 (345)
T ss_dssp             -HCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHH-----T-TCEEEEECCGGGGBTCCCSSBCTTTC
T ss_pred             -CCCEEEEcccccCcc-----chhcCHHHHHHHHHHHHHHHHHHHHH-----h-CCeEEEEecHHHcCCCCCCCcCCccc
Confidence             589999999875211     12345677899999999998888732     2 279999999765431110        


Q ss_pred             --------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---------chhhhhhhhhcC---
Q 023555          171 --------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---------KKDWLNNVASRT---  230 (280)
Q Consensus       171 --------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~---  230 (280)
                              .....|+.+|.+.+.+++.++.++   |++++.++||.+..+......         -..+........   
T Consensus       135 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (345)
T 2bll_A          135 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  211 (345)
T ss_dssp             CCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEE
T ss_pred             ccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcE
Confidence                    011279999999999999999876   799999999999877543210         011111111111   


Q ss_pred             -----CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          231 -----YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       231 -----~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                           .....+..++ |+|+++.+++.......+|+++++.+|.
T Consensus       212 ~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          212 LIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             EGGGSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             EECCCCEEEEEEEHH-HHHHHHHHHHhhccccCCCceEEeCCCC
Confidence                 1122356677 9999999988754444678999999874

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.86  E-value=2.5e-20  Score=165.89  Aligned_cols=177  Identities=16%  Similarity=0.097  Sum_probs=132.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHH-HhCCeEEEEecChhH---------HHHHHHHHHhhcCC--Ccc---eEEEEeccCCC
Q 023555           19 NKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRVDR---------LKSLCDEINKQSGS--SVR---AMAVELDVSAN   83 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~-~~G~~v~l~~r~~~~---------~~~~~~~~~~~~~~--~~~---~~~~~~D~~~~   83 (280)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+.+..+.  ...   +.++.+|++ +
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR-N   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT-C
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC-C
Confidence            3589999999999999999999 999999999987543         34433333332211  113   778899999 6


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      .++++++++    .++++|+|||+||.....     .+.+++++.+++|+.++.++++++.    +. +.++||++||..
T Consensus        81 ~~~~~~~~~----~~~~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~a~~----~~-~~~~iv~~SS~~  146 (397)
T 1gy8_A           81 EDFLNGVFT----RHGPIDAVVHMCAFLAVG-----ESVRDPLKYYDNNVVGILRLLQAML----LH-KCDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----HSCCCCEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HT-TCCEEEEEEEGG
T ss_pred             HHHHHHHHH----hcCCCCEEEECCCccCcC-----cchhhHHHHHHHHhHHHHHHHHHHH----Hh-CCCEEEEECCHH
Confidence            677666655    355699999999975211     1346678899999999999999863    22 357999999976


Q ss_pred             cccCCC----------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          164 ATSRGQ----------------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       164 ~~~~~~----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                      .+....                ......|+.||.+.+.+++.++.++   |+++++++|+.+..+.
T Consensus       147 v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            543111                0125689999999999999999987   8999999999987664

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=6.8e-21  Score=166.22  Aligned_cols=226  Identities=17%  Similarity=0.145  Sum_probs=152.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhC-------CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAG-------CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G-------~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      .++++++|||||+|+||++++++|+++|       ++|++++|+......       .  ...++.++.+|++ +.++++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~--~~~~~~~~~~Dl~-d~~~~~   80 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G--FSGAVDARAADLS-APGEAE   80 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T--CCSEEEEEECCTT-STTHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c--cCCceeEEEcCCC-CHHHHH
Confidence            5789999999999999999999999999       899999997643221       0  1236778899999 667777


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG  168 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~  168 (280)
                      ++++      +++|+|||+||...      ..+.+++++.+++|+.++.++++++.+...+.+..+++|++||...+...
T Consensus        81 ~~~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~  148 (342)
T 2hrz_A           81 KLVE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP  148 (342)
T ss_dssp             HHHH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS
T ss_pred             HHHh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC
Confidence            6664      48999999999752      12456788999999999999999987654322124799999998765421


Q ss_pred             CC---------CCCCCChhhHHHHHHHHHHHHHHhC--CCCeEEEEee--cCcccCccccCccchhhhhhhhhcC---CC
Q 023555          169 QL---------PGGVAYASSKAGLNAMTKCLSLELG--VHKIRVNSIC--PGLFKSEITEGLMKKDWLNNVASRT---YP  232 (280)
Q Consensus       169 ~~---------~~~~~Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~--pG~v~t~~~~~~~~~~~~~~~~~~~---~p  232 (280)
                      ..         .+...|+.+|.+.+.+++.++.++.  ...+|++.|.  ||.+.+.... +. ...........   .|
T Consensus       149 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-~~-~~~~~~~~~~~~~~~~  226 (342)
T 2hrz_A          149 LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-FF-SNILREPLVGQEAVLP  226 (342)
T ss_dssp             CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-HH-HHHHHHHHTTCCEEEC
T ss_pred             CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-HH-HHHHHHHhcCCCeecc
Confidence            00         1457899999999999999987642  1235666666  7765443211 10 11111111111   12


Q ss_pred             CCC-----CCCChHHHHHHHHHhhcCCCC-cccccEEEeC
Q 023555          233 LRD-----FGTTDPALTSLVRYLVHDSSE-YVSGNIFIVD  266 (280)
Q Consensus       233 ~~~-----~~~~~~~va~~~~~l~s~~~~-~i~G~~i~vd  266 (280)
                      ...     +..++ |+++.+.+++..... ...|+.+++.
T Consensus       227 ~~~~~~~~~~~v~-Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          227 VPESIRHWHASPR-SAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             SCTTCEEEEECHH-HHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             CCCccceeeEehH-HHHHHHHHHHhccccccCCccEEEcC
Confidence            221     34566 899988887753311 1135678774

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=2.8e-21  Score=159.09  Aligned_cols=211  Identities=11%  Similarity=-0.004  Sum_probs=147.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +++|||||+|+||++++++|+++|++|++++|+.++....          ...+.++.+|++ +.++++++++       
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~Dl~-d~~~~~~~~~-------   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----------NEHLKVKKADVS-SLDEVCEVCK-------   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----------CTTEEEECCCTT-CHHHHHHHHT-------
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----------cCceEEEEecCC-CHHHHHHHhc-------
Confidence            7899999999999999999999999999999997654321          136888999999 6777776665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------CCC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------QLP  171 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------~~~  171 (280)
                      ++|+|||+||....        .   .+.+++|+.++..+++++.    +.+ .+++|++||.......        +..
T Consensus        67 ~~d~vi~~a~~~~~--------~---~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~  130 (227)
T 3dhn_A           67 GADAVISAFNPGWN--------N---PDIYDETIKVYLTIIDGVK----KAG-VNRFLMVGGAGSLFIAPGLRLMDSGEV  130 (227)
T ss_dssp             TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHH----HTT-CSEEEEECCSTTSEEETTEEGGGTTCS
T ss_pred             CCCEEEEeCcCCCC--------C---hhHHHHHHHHHHHHHHHHH----HhC-CCEEEEeCChhhccCCCCCccccCCcc
Confidence            68999999986411        1   1267889999988888763    322 5699999997754321        112


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      ....|+.+|.+.+.+++.++.+   .|++++.++||.+.++......... .............+..++ |+|+++.+++
T Consensus       131 p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~i~~~-Dva~ai~~~l  205 (227)
T 3dhn_A          131 PENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRL-GKDDMIVDIVGNSHISVE-DYAAAMIDEL  205 (227)
T ss_dssp             CGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEE-ESSBCCCCTTSCCEEEHH-HHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceee-cCCCcccCCCCCcEEeHH-HHHHHHHHHH
Confidence            3568999999999988888764   5899999999998776432110000 000000000012345566 9999999988


Q ss_pred             cCCCCcccccEEEeCCcccC
Q 023555          252 HDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ...  ...|+.+.+-+.-..
T Consensus       206 ~~~--~~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          206 EHP--KHHQERFTIGYLEHH  223 (227)
T ss_dssp             HSC--CCCSEEEEEECCSCC
T ss_pred             hCc--cccCcEEEEEeehhc
Confidence            654  357888888765443

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=4.6e-20  Score=162.73  Aligned_cols=232  Identities=14%  Similarity=0.118  Sum_probs=148.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH-HHHHHHHhhc-CCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINKQS-GSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +|++|||||+|+||++++++|+++|++|++++|+..... ...+.+.+.. ....++.++.+|++ +.++++++++..  
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~--   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS-DTSNLTRILREV--   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSS-CHHHHHHHHHHH--
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCC-CHHHHHHHHHhc--
Confidence            478999999999999999999999999999999865421 1111111100 01235778899999 678888887765  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------  168 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------  168 (280)
                         ++|+|||+||....     ..+.++++..+++|+.++.++++++.+...+  +.+++|++||...+...        
T Consensus        78 ---~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~iv~~SS~~v~g~~~~~~~~E~  147 (372)
T 1db3_A           78 ---QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSELYGLVQEIPQKET  147 (372)
T ss_dssp             ---CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             ---CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCChhhhCCCCCCCCCcc
Confidence               79999999997532     1234556788999999999999998664322  13799999997654321        


Q ss_pred             -CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCC---------CCC
Q 023555          169 -QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTY---------PLR  234 (280)
Q Consensus       169 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~---------p~~  234 (280)
                       +..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+.......    ..+.........         ...
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (372)
T 1db3_A          148 TPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (372)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCcee
Confidence             11235689999999999999999886   5666666665544332211110    111111111111         112


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .+...+ |+++++..++....    ++.+++.+|..+
T Consensus       225 ~~i~v~-Dva~a~~~~~~~~~----~~~~ni~~~~~~  256 (372)
T 1db3_A          225 DWGHAK-DYVKMQWMMLQQEQ----PEDFVIATGVQY  256 (372)
T ss_dssp             CCEEHH-HHHHHHHHTTSSSS----CCCEEECCCCCE
T ss_pred             eeeEHH-HHHHHHHHHHhcCC----CceEEEcCCCce
Confidence            355566 99999888775432    356777666543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=3.4e-20  Score=161.29  Aligned_cols=230  Identities=14%  Similarity=0.050  Sum_probs=153.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH-HHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..-.+++||||||+|+||+++++.|+++|++|++++|+..... ...+.+.    ...++.++.+|++ +.++++++++.
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~-d~~~~~~~~~~   84 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG----IEGDIQYEDGDMA-DACSVQRAVIK   84 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT----CGGGEEEEECCTT-CHHHHHHHHHH
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc----ccCceEEEECCCC-CHHHHHHHHHH
Confidence            3456889999999999999999999999999999999765321 1111111    1236778899999 67888887776


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ----  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~----  169 (280)
                      .     ++|+|||+||.....     .+.++++..+++|+.++.++++++.+.    +..+++|++||...+....    
T Consensus        85 ~-----~~d~Vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~  150 (335)
T 1rpn_A           85 A-----QPQEVYNLAAQSFVG-----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQ  150 (335)
T ss_dssp             H-----CCSEEEECCSCCCHH-----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSB
T ss_pred             c-----CCCEEEECccccchh-----hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCC
Confidence            4     789999999964211     112346788999999999999988442    2137999999976543211    


Q ss_pred             -----CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCC---C----
Q 023555          170 -----LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYP---L----  233 (280)
Q Consensus       170 -----~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p---~----  233 (280)
                           ......|+.+|.+.+.+++.++.++   ++++..+.|+.+..+.......    ..++........+   .    
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~  227 (335)
T 1rpn_A          151 DENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVD  227 (335)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTT
T ss_pred             CcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCc
Confidence                 1124579999999999999999876   6788888988876654322111    1111111111111   1    


Q ss_pred             --CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          234 --RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       234 --~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                        ..+...+ |+|.++..++....    ++.+++.+|..+
T Consensus       228 ~~~~~i~v~-Dva~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          228 AKRDWGFAG-DYVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             CEEECEEHH-HHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             ceeceEEHH-HHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence              1244456 99999988886432    357888777544

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.85  E-value=5.6e-20  Score=150.86  Aligned_cols=200  Identities=11%  Similarity=0.009  Sum_probs=133.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|+||++++++|+++|++|++++|+.+++....         ...+.++.+|++ +.++         +.+++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~~D~~-d~~~---------~~~~~   62 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL---------GATVATLVKEPL-VLTE---------ADLDS   62 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT---------CTTSEEEECCGG-GCCH---------HHHTT
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc---------CCCceEEecccc-cccH---------hhccc
Confidence            5999999999999999999999999999999987765431         125778899999 4444         23458


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCC---------
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLP---------  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~---------  171 (280)
                      +|+|||+||.....    .        ..++|+.++..+++++    ++ .+ +++|++||..+....+..         
T Consensus        63 ~d~vi~~ag~~~~~----~--------~~~~n~~~~~~l~~a~----~~-~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~  124 (224)
T 3h2s_A           63 VDAVVDALSVPWGS----G--------RGYLHLDFATHLVSLL----RN-SD-TLAVFILGSASLAMPGADHPMILDFPE  124 (224)
T ss_dssp             CSEEEECCCCCTTS----S--------CTHHHHHHHHHHHHTC----TT-CC-CEEEEECCGGGSBCTTCSSCGGGGCCG
T ss_pred             CCEEEECCccCCCc----c--------hhhHHHHHHHHHHHHH----HH-cC-CcEEEEecceeeccCCCCccccccCCC
Confidence            99999999975111    0        1245777766555544    44 33 899999997665422110         


Q ss_pred             ---CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          172 ---GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       172 ---~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                         ....|+.+|.+.+.+ +   ......|++++.|+||.+.++....-+.  ..............+..++ |+|+++.
T Consensus       125 ~~~~~~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~i~~~-DvA~~~~  197 (224)
T 3h2s_A          125 SAASQPWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATSYV--AGKDTLLVGEDGQSHITTG-NMALAIL  197 (224)
T ss_dssp             GGGGSTTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCCEE--EESSBCCCCTTSCCBCCHH-HHHHHHH
T ss_pred             CCccchhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccCce--ecccccccCCCCCceEeHH-HHHHHHH
Confidence               156899999998854 2   2223569999999999998773211110  0000000001123456777 9999999


Q ss_pred             HhhcCCCCcccccEEEeC
Q 023555          249 YLVHDSSEYVSGNIFIVD  266 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vd  266 (280)
                      +++...  ...|+.+.+-
T Consensus       198 ~~l~~~--~~~g~~~~~~  213 (224)
T 3h2s_A          198 DQLEHP--TAIRDRIVVR  213 (224)
T ss_dssp             HHHHSC--CCTTSEEEEE
T ss_pred             HHhcCc--cccCCEEEEe
Confidence            988654  3457777763

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.84  E-value=3.2e-21  Score=162.79  Aligned_cols=183  Identities=17%  Similarity=0.183  Sum_probs=136.9

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|++|||||+|+||++++++|+++|++|++++|+.....            ...+.++.+|++ +.+++.++++      
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~~~~Dl~-d~~~~~~~~~------   62 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------------EAHEEIVACDLA-DAQAVHDLVK------   62 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------------CTTEEECCCCTT-CHHHHHHHHT------
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------------CCCccEEEccCC-CHHHHHHHHc------
Confidence            378999999999999999999999999999999865311            014678899999 6666666654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC--------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--------  170 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~--------  170 (280)
                       ++|+|||+||...         .+++++.+++|+.++.++++++.+    . +.+++|++||...+...+.        
T Consensus        63 -~~d~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~iv~~SS~~~~~~~~~~~~~~E~~  127 (267)
T 3ay3_A           63 -DCDGIIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARN----L-GKPRIVFASSNHTIGYYPRTTRIDTEV  127 (267)
T ss_dssp             -TCSEEEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHH----T-TCCEEEEEEEGGGSTTSBTTSCBCTTS
T ss_pred             -CCCEEEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCHHHhCCCCCCCCCCCCC
Confidence             6999999998741         133577899999999999998743    2 2579999999876532111        


Q ss_pred             --CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcc-cCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHH
Q 023555          171 --PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLF-KSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       171 --~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                        .....|+.+|.+++.+++.++.+   .|++++.++||.+ .++..     ...          ...+..++ |+++.+
T Consensus       128 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~-----~~~----------~~~~~~~~-dva~~~  188 (267)
T 3ay3_A          128 PRRPDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKD-----ARM----------MATWLSVD-DFMRLM  188 (267)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCS-----HHH----------HHHBCCHH-HHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCC-----CCe----------eeccccHH-HHHHHH
Confidence              13468999999999999988754   5899999999997 33321     110          11234566 999998


Q ss_pred             HHhhcCC
Q 023555          248 RYLVHDS  254 (280)
Q Consensus       248 ~~l~s~~  254 (280)
                      ..++...
T Consensus       189 ~~~~~~~  195 (267)
T 3ay3_A          189 KRAFVAP  195 (267)
T ss_dssp             HHHHHSS
T ss_pred             HHHHhCC
Confidence            8887643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.84  E-value=6.2e-20  Score=159.30  Aligned_cols=224  Identities=14%  Similarity=0.134  Sum_probs=153.9

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |++|||||+|+||++++++|+++|++|++++|+.....   +.+    .  .++.++.+|++ +.+++++++++     .
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~----~--~~~~~~~~D~~-~~~~~~~~~~~-----~   66 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI----T--EGAKFYNGDLR-DKAFLRDVFTQ-----E   66 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS----C--TTSEEEECCTT-CHHHHHHHHHH-----S
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc----C--CCcEEEECCCC-CHHHHHHHHhh-----c
Confidence            58999999999999999999999999999998754321   111    1  15677899999 67777777664     3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~  170 (280)
                      ++|+|||+||.....     .+.+++++.+++|+.++..+++++.    +. +.+++|++||...+...         +.
T Consensus        67 ~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~-~~~~~v~~Ss~~~~~~~~~~~~~E~~~~  136 (330)
T 2c20_A           67 NIEAVMHFAADSLVG-----VSMEKPLQYYNNNVYGALCLLEVMD----EF-KVDKFIFSSTAATYGEVDVDLITEETMT  136 (330)
T ss_dssp             CEEEEEECCCCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHH----HT-TCCEEEEECCGGGGCSCSSSSBCTTSCC
T ss_pred             CCCEEEECCcccCcc-----ccccCHHHHHHHHhHHHHHHHHHHH----Hc-CCCEEEEeCCceeeCCCCCCCCCcCCCC
Confidence            899999999875211     1346678899999999999998863    22 25799999997654311         11


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc------c---hhhhhh-hhhcCCC--------
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM------K---KDWLNN-VASRTYP--------  232 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~------~---~~~~~~-~~~~~~p--------  232 (280)
                      .....|+.+|.+.+.+++.++.++   |++++.++||.+..+......      .   -..+.. ......+        
T Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (330)
T 2c20_A          137 NPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDY  213 (330)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCcc
Confidence            235789999999999999998875   899999999988776421110      0   011111 1111111        


Q ss_pred             -------CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          233 -------LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       233 -------~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                             ...+...+ |+++++..++........|+.+++.+|..++
T Consensus       214 ~~~~g~~~~~~v~v~-Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  259 (330)
T 2c20_A          214 NTPDGTCIRDYIHVE-DLVAAHFLGLKDLQNGGESDFYNLGNGNGFS  259 (330)
T ss_dssp             SSSSSSCEECEEEHH-HHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred             ccCCCceeEeeEeHH-HHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence                   11234456 9999888877532222236788887776543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=7.4e-22  Score=161.05  Aligned_cols=197  Identities=14%  Similarity=0.078  Sum_probs=140.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+|+++||||+|+||++++++|+++|+  +|++++|++++         .    ..++.++.+|++ +.+++++++    
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~----~~~~~~~~~D~~-~~~~~~~~~----   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------E----HPRLDNPVGPLA-ELLPQLDGS----   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------C----CTTEECCBSCHH-HHGGGCCSC----
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------c----CCCceEEecccc-CHHHHHHhh----
Confidence            468999999999999999999999998  99999998754         0    125667788887 444443332    


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                           +|++||++|....       +.+++++.+++|+.++..+++++.+    . +.+++|++||.....    ++...
T Consensus        66 -----~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~~~~~----~~~~~  124 (215)
T 2a35_A           66 -----IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSALGADA----KSSIF  124 (215)
T ss_dssp             -----CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTTCCT----TCSSH
T ss_pred             -----hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHH----c-CCCEEEEECCcccCC----CCccH
Confidence                 8999999986421       2345778899999999999988733    2 256999999987653    24568


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeE-EEEeecCcccCccccCccchhhhhhhhhcCCCCC----CCCCChHHHHHHHHHh
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIR-VNSICPGLFKSEITEGLMKKDWLNNVASRTYPLR----DFGTTDPALTSLVRYL  250 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~-vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~va~~~~~l  250 (280)
                      |+.+|.+++.+++.       .|++ ++.|+||.+.++......    .........|..    .+..++ |+|+++..+
T Consensus       125 y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~  192 (215)
T 2a35_A          125 YNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRL----AEILAAPIARILPGKYHGIEAC-DLARALWRL  192 (215)
T ss_dssp             HHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEG----GGGTTCCCC----CHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchH----HHHHHHhhhhccCCCcCcEeHH-HHHHHHHHH
Confidence            99999999988764       3798 999999999887543111    111111111211    233455 899999888


Q ss_pred             hcCCCCcccccEEEeCCcc
Q 023555          251 VHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~  269 (280)
                      +....    |+.+.+.++.
T Consensus       193 ~~~~~----~~~~~i~~~~  207 (215)
T 2a35_A          193 ALEEG----KGVRFVESDE  207 (215)
T ss_dssp             HTCCC----SEEEEEEHHH
T ss_pred             HhcCC----CCceEEcHHH
Confidence            86542    5677776654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=2.2e-19  Score=158.70  Aligned_cols=229  Identities=10%  Similarity=0.065  Sum_probs=153.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-----HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |++|||||+|+||++++++|+++|++|++++|+...     ++.+.+.+...  ...++.++.+|++ +.+++.++++..
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~Dl~-d~~~~~~~~~~~  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH--IEGNMKLHYGDLT-DSTCLVKIINEV  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTT-CHHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc--cCCCceEEEccCC-CHHHHHHHHHhc
Confidence            689999999999999999999999999999997542     22111111000  0125778899999 678888877765


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           ++|+|||+||....     ..+.++++..+++|+.++.++++++.+...+  +.++||++||...+...      
T Consensus       102 -----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~  169 (375)
T 1t2a_A          102 -----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQASTSELYGKVQEIPQK  169 (375)
T ss_dssp             -----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGTCSCSSSSBC
T ss_pred             -----CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--ccceEEEecchhhhCCCCCCCCC
Confidence                 79999999997421     1234677889999999999999998654321  13799999997765321      


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC-ccc---hhhhhhhhhcCCC---------
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG-LMK---KDWLNNVASRTYP---------  232 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~-~~~---~~~~~~~~~~~~p---------  232 (280)
                         +..+...|+.+|++.+.+++.++.++   ++.+..+.|+.+..+.... ...   ..++........+         
T Consensus       170 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  246 (375)
T 1t2a_A          170 ETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDA  246 (375)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTC
T ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCc
Confidence               11235689999999999999999886   6788778877665543221 110   0111111111111         


Q ss_pred             CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ...+...+ |+++++..++....    ++.+++.+|..+
T Consensus       247 ~~~~i~v~-Dva~a~~~~~~~~~----~~~~ni~~~~~~  280 (375)
T 1t2a_A          247 KRDWGHAK-DYVEAMWLMLQNDE----PEDFVIATGEVH  280 (375)
T ss_dssp             EECCEEHH-HHHHHHHHHHHSSS----CCCEEECCSCCE
T ss_pred             eeeeEEHH-HHHHHHHHHHhcCC----CceEEEeCCCcc
Confidence            12345566 99999888876432    256777666543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.83  E-value=3.9e-21  Score=167.54  Aligned_cols=222  Identities=16%  Similarity=0.130  Sum_probs=142.4

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH--HHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL--CDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +|++|||||+|+||++++++|+++|++|+++.|+.++....  ...+..    ..++.++.+|++ +.++++++++    
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~-d~~~~~~~~~----   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE----LGDLKIFRADLT-DELSFEAPIA----   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG----GSCEEEEECCTT-TSSSSHHHHT----
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC----CCcEEEEecCCC-ChHHHHHHHc----
Confidence            68999999999999999999999999999988876532211  112211    125777899998 5566665554    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC----C---C
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR----G---Q  169 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~----~---~  169 (280)
                         ++|+|||+|+...    ..  ..+..++.+++|+.++.++++++.+.    ...++||++||..+...    .   +
T Consensus        80 ---~~D~Vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~----~~v~r~V~~SS~~~~~~~~~~~~~~~  146 (338)
T 2rh8_A           80 ---GCDFVFHVATPVH----FA--SEDPENDMIKPAIQGVVNVMKACTRA----KSVKRVILTSSAAAVTINQLDGTGLV  146 (338)
T ss_dssp             ---TCSEEEEESSCCC----C-----------CHHHHHHHHHHHHHHHHC----TTCCEEEEECCHHHHHHHHHTCSCCC
T ss_pred             ---CCCEEEEeCCccC----CC--CCCcHHHHHHHHHHHHHHHHHHHHHc----CCcCEEEEEecHHHeecCCcCCCCcc
Confidence               6899999998641    11  11222458899999999999988542    12479999999763210    0   0


Q ss_pred             C------------C---CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhh--hhhhhhcC--
Q 023555          170 L------------P---GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDW--LNNVASRT--  230 (280)
Q Consensus       170 ~------------~---~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~--~~~~~~~~--  230 (280)
                      .            +   ....|+.||.+.+.+++.++.++   |+++++|+||.+.++..........  ........  
T Consensus       147 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~  223 (338)
T 2rh8_A          147 VDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF  223 (338)
T ss_dssp             CCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH
T ss_pred             cChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc
Confidence            0            0   11269999999999988887654   8999999999999886533211110  00000000  


Q ss_pred             -C--------C--CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          231 -Y--------P--LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       231 -~--------p--~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                       .        +  ...+..++ |+|+++.+++...  ...|.++..+++
T Consensus       224 ~~~~~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~~~~~~~~~~  269 (338)
T 2rh8_A          224 LINGMKGMQMLSGSVSIAHVE-DVCRAHIFVAEKE--SASGRYICCAAN  269 (338)
T ss_dssp             HHHHHHHHHHHHSSEEEEEHH-HHHHHHHHHHHCT--TCCEEEEECSEE
T ss_pred             ccccccccccccCcccEEEHH-HHHHHHHHHHcCC--CcCCcEEEecCC
Confidence             0        0  01366777 9999998888642  235655444443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.83  E-value=2.3e-19  Score=154.66  Aligned_cols=212  Identities=15%  Similarity=0.140  Sum_probs=149.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++++|||||+|+||++++++|+++|++|++++|+....+ + +          .+.++.+|++  .+++.++++      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~----------~~~~~~~Dl~--~~~~~~~~~------   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N----------DYEYRVSDYT--LEDLINQLN------   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC--HHHHHHHTT------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C----------ceEEEEcccc--HHHHHHhhc------
Confidence            378999999999999999999999999999999843322 1 1          4677899987  455555544      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------C
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------Q  169 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~  169 (280)
                       ++|+|||+|+.....         +....+++|+.++.++++++.    +. +.+++|++||...+...         +
T Consensus        62 -~~d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~----~~-~~~r~v~~SS~~vyg~~~~~~~~E~~~  126 (311)
T 3m2p_A           62 -DVDAVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACY----EN-NISNIVYASTISAYSDETSLPWNEKEL  126 (311)
T ss_dssp             -TCSEEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHH----HT-TCCEEEEEEEGGGCCCGGGCSBCTTSC
T ss_pred             -CCCEEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEEccHHHhCCCCCCCCCCCCC
Confidence             899999999976322         334578899999999888873    22 25689999996654311         1


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhcC-C-------CCCCCCCCh
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASRT-Y-------PLRDFGTTD  240 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~-------p~~~~~~~~  240 (280)
                      ......|+.+|.+.+.+++.++.+   .|++++.++|+.+..+..... ....+........ .       ....+...+
T Consensus       127 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~  203 (311)
T 3m2p_A          127 PLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAK  203 (311)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHH
Confidence            123468999999999999999886   489999999999987754421 1111222211111 1       112244455


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       |+|+++.+++....   .|+.+++.+|..++
T Consensus       204 -Dva~a~~~~~~~~~---~~~~~~i~~~~~~s  231 (311)
T 3m2p_A          204 -DAAKSVIYALKQEK---VSGTFNIGSGDALT  231 (311)
T ss_dssp             -HHHHHHHHHTTCTT---CCEEEEECCSCEEC
T ss_pred             -HHHHHHHHHHhcCC---CCCeEEeCCCCccc
Confidence             99999988886543   78899998887654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.83  E-value=3.8e-20  Score=157.98  Aligned_cols=201  Identities=16%  Similarity=0.225  Sum_probs=144.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -..+++|||||+|+||++++++|+++|++|++++|+                        .+|++ +.++++++++..  
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~-d~~~~~~~~~~~--   62 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDIT-NVLAVNKFFNEK--   62 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTT-CHHHHHHHHHHH--
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCC-CHHHHHHHHHhc--
Confidence            346899999999999999999999999999999995                        26888 677777777654  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC-------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ-------  169 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~-------  169 (280)
                         ++|+|||+||....     +.+.+++++.+++|+.++.++++++.+    .+  .++|++||...+....       
T Consensus        63 ---~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~--~~iv~~SS~~v~~~~~~~~~~E~  128 (292)
T 1vl0_A           63 ---KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYS----VG--AEIVQISTDYVFDGEAKEPITEF  128 (292)
T ss_dssp             ---CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT--CEEEEEEEGGGSCSCCSSCBCTT
T ss_pred             ---CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEechHHeECCCCCCCCCCC
Confidence               79999999987421     123467788999999999999998854    22  3999999976543211       


Q ss_pred             --CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcC-C-----CCCCCCCChH
Q 023555          170 --LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-Y-----PLRDFGTTDP  241 (280)
Q Consensus       170 --~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~-----p~~~~~~~~~  241 (280)
                        ......|+.+|.+.+.+++.++.       .+..++|+.+..+ ..... ........... .     ....+..++ 
T Consensus       129 ~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~-  198 (292)
T 1vl0_A          129 DEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFV-KTMINLGKTHDELKVVHDQVGTPTSTV-  198 (292)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHH-HHHHHHHHHCSEEEEESSCEECCEEHH-
T ss_pred             CCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChH-HHHHHHHhcCCcEEeecCeeeCCccHH-
Confidence              11356899999999999988753       3677888887755 22211 11111111110 0     224456677 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+|+++.+++...    +|+.+++.+|..++
T Consensus       199 Dva~~~~~~~~~~----~~~~~~i~~~~~~s  225 (292)
T 1vl0_A          199 DLARVVLKVIDEK----NYGTFHCTCKGICS  225 (292)
T ss_dssp             HHHHHHHHHHHHT----CCEEEECCCBSCEE
T ss_pred             HHHHHHHHHHhcC----CCcEEEecCCCCcc
Confidence            9999999998754    68899999886543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.83  E-value=6.1e-20  Score=173.77  Aligned_cols=224  Identities=12%  Similarity=0.121  Sum_probs=156.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++++|||||+|+||++++++|+++ |++|++++|+....+...        ...++.++.+|+++..+.++++++  
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~v~~Dl~d~~~~~~~~~~--  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIHSEWIEYHVK--  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT--------TCTTEEEEECCTTTCHHHHHHHHH--
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc--------cCCceEEEECCCCCcHHHHHHhhc--
Confidence            467899999999999999999999998 899999999875533211        123677889999943222444443  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---C-
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---L-  170 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---~-  170 (280)
                           ++|+|||+||.....     ...+++.+.+++|+.++.++++++.+     .+ +++|++||...+....   . 
T Consensus       382 -----~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~aa~~-----~~-~r~V~~SS~~vyg~~~~~~~~  445 (660)
T 1z7e_A          382 -----KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVK-----YR-KRIIFPSTSEVYGMCSDKYFD  445 (660)
T ss_dssp             -----HCSEEEECCCCCCTH-----HHHHSHHHHHHHHTHHHHHHHHHHHH-----TT-CEEEEECCGGGGBTCCSSSBC
T ss_pred             -----CCCEEEECceecCcc-----ccccCHHHHHHhhhHHHHHHHHHHHH-----hC-CEEEEEecHHHcCCCCCcccC
Confidence                 589999999975221     12355678899999999999888743     22 7999999976543111   0 


Q ss_pred             ------------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc---------cchhhhhhhhhc
Q 023555          171 ------------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL---------MKKDWLNNVASR  229 (280)
Q Consensus       171 ------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~---------~~~~~~~~~~~~  229 (280)
                                  .....|+.||.+.+.+++.++.++   |++++.++||.+.++.....         .-..+.......
T Consensus       446 E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g  522 (660)
T 1z7e_A          446 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEG  522 (660)
T ss_dssp             TTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHT
T ss_pred             CCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcC
Confidence                        112269999999999999998876   79999999999988764321         001111221111


Q ss_pred             CC--------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          230 TY--------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       230 ~~--------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      ..        ....+..++ |+|+++.+++.......+|+++++++|.
T Consensus       523 ~~~~~~g~g~~~~~~i~v~-Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          523 SPIKLIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             CCEEEEGGGCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCcEEeCCCCeEEEEEEHH-HHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            11        112355566 9999999988755445689999999884

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.82  E-value=5.9e-19  Score=144.29  Aligned_cols=205  Identities=10%  Similarity=0.055  Sum_probs=128.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +||||||+|+||++++++|+++|++|++++|+.++++...          ..+.++.+|++ +.++         +.+++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----------~~~~~~~~D~~-d~~~---------~~~~~   61 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----------KDINILQKDIF-DLTL---------SDLSD   61 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----------SSSEEEECCGG-GCCH---------HHHTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----------CCCeEEecccc-Chhh---------hhhcC
Confidence            5999999999999999999999999999999987665431          25778899999 4444         23358


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC----------
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL----------  170 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~----------  170 (280)
                      +|+|||++|....              ..++|+.++..+    ++.+++. +.+++|++||..+....+.          
T Consensus        62 ~d~vi~~ag~~~~--------------~~~~~~~~~~~l----~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  122 (221)
T 3ew7_A           62 QNVVVDAYGISPD--------------EAEKHVTSLDHL----ISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLESKGL  122 (221)
T ss_dssp             CSEEEECCCSSTT--------------TTTSHHHHHHHH----HHHHCSC-CSSEEEEECCCC-----------------
T ss_pred             CCEEEECCcCCcc--------------ccchHHHHHHHH----HHHHHhc-CCceEEEEecceEEEcCCCCccccccCCC
Confidence            9999999997421              123355555544    4455543 3689999999876432111          


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      .....|+.+|.+.+.+. .+..  ...|++++.|+||.+.++.... .......+..........+..++ |+|+++..+
T Consensus       123 ~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~  197 (221)
T 3ew7_A          123 REAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERT-GDYQIGKDHLLFGSDGNSFISME-DYAIAVLDE  197 (221)
T ss_dssp             --CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC----------------------CCCHH-HHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCcc-CceEeccccceecCCCCceEeHH-HHHHHHHHH
Confidence            12456999999998863 2222  1468999999999998762110 00000000000000112356676 999999888


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +...  ...|+.+.+-|-.+.
T Consensus       198 l~~~--~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          198 IERP--NHLNEHFTVAGKLEH  216 (221)
T ss_dssp             HHSC--SCTTSEEECCC----
T ss_pred             HhCc--cccCCEEEECCCCcc
Confidence            8654  356888888776544

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.82  E-value=2.5e-19  Score=156.07  Aligned_cols=170  Identities=19%  Similarity=0.199  Sum_probs=122.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|+||++++++|+++|++|++++|.........+.+.+..+  .++.++.+|++ +.++++++++.    + +
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~-~~~~~~~~~~~----~-~   73 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIR-NEALMTEILHD----H-A   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT--SCCEEEECCTT-CHHHHHHHHHH----T-T
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC--CcceEEEccCC-CHHHHHHHhhc----c-C
Confidence            699999999999999999999999999988643211111122222111  24677899999 67777776654    2 6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC-
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL-  170 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~-  170 (280)
                      +|+|||+||.....     ...++..+.+++|+.++..+++++    ++.+ .+++|++||...+...         +. 
T Consensus        74 ~D~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~  143 (338)
T 1udb_A           74 IDTVIHFAGLKAVG-----ESVQKPLEYYDNNVNGTLRLISAM----RAAN-VKNFIFSSSATVYGDNPKIPYVESFPTG  143 (338)
T ss_dssp             CSEEEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHH----HHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCC
T ss_pred             CCEEEECCccCccc-----cchhcHHHHHHHHHHHHHHHHHHH----HhcC-CCeEEEEccHHHhCCCCCCCcCcccCCC
Confidence            99999999974211     123456678999999999998865    2322 5799999997654210         11 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCccc
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK  210 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~  210 (280)
                      +....|+.||++++.+++.++.++  .++++..++|+.+.
T Consensus       144 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~  181 (338)
T 1udb_A          144 TPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV  181 (338)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceec
Confidence            235789999999999999999884  37899888886554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.82  E-value=8.2e-20  Score=159.56  Aligned_cols=223  Identities=11%  Similarity=0.040  Sum_probs=147.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      .+..+++++||||||+|+||++++++|+++|++|++++|+........+.+   . ...++.++.+|+.+.         
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~D~~~~---------   87 (343)
T 2b69_A           21 GHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---I-GHENFELINHDVVEP---------   87 (343)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---T-TCTTEEEEECCTTSC---------
T ss_pred             cccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---c-cCCceEEEeCccCCh---------
Confidence            344678899999999999999999999999999999998643211111111   0 123577889999842         


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----  168 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----  168 (280)
                          .+.++|+|||+|+......     ..++.+..+++|+.++.++++++.+    .  +.++|++||...+...    
T Consensus        88 ----~~~~~d~vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~v~g~~~~~~  152 (343)
T 2b69_A           88 ----LYIEVDQIYHLASPASPPN-----YMYNPIKTLKTNTIGTLNMLGLAKR----V--GARLLLASTSEVYGDPEVHP  152 (343)
T ss_dssp             ----CCCCCSEEEECCSCCSHHH-----HTTCHHHHHHHHHHHHHHHHHHHHH----H--TCEEEEEEEGGGGBSCSSSS
T ss_pred             ----hhcCCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHH----h--CCcEEEECcHHHhCCCCCCC
Confidence                1457999999998752110     0123467889999999999998743    2  2499999997654211    


Q ss_pred             ----------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc---cchhhhhhhhhcC-C---
Q 023555          169 ----------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL---MKKDWLNNVASRT-Y---  231 (280)
Q Consensus       169 ----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~---~~~~~~~~~~~~~-~---  231 (280)
                                +......|+.+|.+.+.+++.++.++   |++++.++||.+.++.....   .-..+........ .   
T Consensus       153 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (343)
T 2b69_A          153 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY  229 (343)
T ss_dssp             BCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEE
T ss_pred             CcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEc
Confidence                      11234569999999999999998875   79999999999988753211   0011222211111 1   


Q ss_pred             ----CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          232 ----PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       232 ----p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                          ....+..++ |+|+++.+++...    .|+.+++.+|..+
T Consensus       230 ~~~~~~~~~v~v~-Dva~a~~~~~~~~----~~~~~~i~~~~~~  268 (343)
T 2b69_A          230 GSGSQTRAFQYVS-DLVNGLVALMNSN----VSSPVNLGNPEEH  268 (343)
T ss_dssp             SSSCCEEECEEHH-HHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             CCCCeEEeeEeHH-HHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence                112345666 9999998888643    2567888877654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.82  E-value=1.9e-19  Score=154.91  Aligned_cols=217  Identities=16%  Similarity=0.086  Sum_probs=150.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +|++|||||+|+||++++++|+++  |++|++++|+....+     +.+      ++.++.+|++ +.+++++++++.  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~------~~~~~~~D~~-d~~~~~~~~~~~--   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN------SGPFEVVNAL-DFNQIEHLVEVH--   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH------SSCEEECCTT-CHHHHHHHHHHT--
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC------CCceEEecCC-CHHHHHHHHhhc--
Confidence            478999999999999999999999  999999999865421     111      3557899999 677777776643  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC-------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ-------  169 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~-------  169 (280)
                         ++|+|||+|+....      ...++.++.+++|+.++..+++++.+     .+.+++|++||...+....       
T Consensus        68 ---~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~e  133 (312)
T 2yy7_A           68 ---KITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKA-----KKIKKIFWPSSIAVFGPTTPKENTPQ  133 (312)
T ss_dssp             ---TCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHT-----TSCSEEECCEEGGGCCTTSCSSSBCS
T ss_pred             ---CCCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHH-----cCCCEEEEeccHHHhCCCCCCCCccc
Confidence               79999999986421      12356778899999999999998732     2356999999987653211       


Q ss_pred             ---CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-----chhhhhhhhhcC-CC-------C
Q 023555          170 ---LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-----KKDWLNNVASRT-YP-------L  233 (280)
Q Consensus       170 ---~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~-~p-------~  233 (280)
                         ......|+.+|.+.+.+++.++.++   |++++.++||.+..+......     ....+....... .+       .
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (312)
T 2yy7_A          134 YTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETK  210 (312)
T ss_dssp             SCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCC
T ss_pred             cCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCce
Confidence               1235689999999999999998876   799999999998775421100     011111111111 11       1


Q ss_pred             CCCCCChHHHHHHHHHhhcCCCCcc-cccEEEeCC
Q 023555          234 RDFGTTDPALTSLVRYLVHDSSEYV-SGNIFIVDS  267 (280)
Q Consensus       234 ~~~~~~~~~va~~~~~l~s~~~~~i-~G~~i~vdg  267 (280)
                      ..+...+ |+++++..++....... .|+.+++.+
T Consensus       211 ~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          211 MPMMYMD-DAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             EEEEEHH-HHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             eeeeeHH-HHHHHHHHHHhCcccccccCceEEeCC
Confidence            1233456 99999888876443222 247888864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.81  E-value=2.4e-19  Score=155.03  Aligned_cols=213  Identities=14%  Similarity=0.120  Sum_probs=148.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |+++++|||||+|+||++++++|+++|++|++++|+.                       .+|++ +.++++++++..  
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~-d~~~~~~~~~~~--   54 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLL-DSRAVHDFFASE--   54 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTT-CHHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCcc-CHHHHHHHHHhc--
Confidence            3568999999999999999999999999999988762                       26888 677777777654  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------  168 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------  168 (280)
                         ++|+|||+|+....    .....++..+.+++|+.++..+++++.+    . +.+++|++||...+...        
T Consensus        55 ---~~d~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~vyg~~~~~~~~E~  122 (321)
T 1e6u_A           55 ---RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQ----N-DVNKLLFLGSSCIYPKLAKQPMAES  122 (321)
T ss_dssp             ---CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGGGSCTTCCSSBCGG
T ss_pred             ---CCCEEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCeEEEEccHHHcCCCCCCCcCcc
Confidence               79999999986421    0112445678899999999999988743    2 24699999997654311        


Q ss_pred             ------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhh------cCC
Q 023555          169 ------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVAS------RTY  231 (280)
Q Consensus       169 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~------~~~  231 (280)
                            ..|....|+.+|.+.+.+++.++.++   |++++.++||.+..+.....     .-..+......      ...
T Consensus       123 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  199 (321)
T 1e6u_A          123 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDV  199 (321)
T ss_dssp             GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEE
T ss_pred             ccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCce
Confidence                  11112489999999999999998876   79999999999987754311     11112221111      111


Q ss_pred             -------CCCCCCCChHHHHHHHHHhhcCCCCc------ccccEEEeCCcccC
Q 023555          232 -------PLRDFGTTDPALTSLVRYLVHDSSEY------VSGNIFIVDSGATL  271 (280)
Q Consensus       232 -------p~~~~~~~~~~va~~~~~l~s~~~~~------i~G~~i~vdgG~~~  271 (280)
                             ....+...+ |+++++..++......      ..|+.+++.+|..+
T Consensus       200 ~~~~~g~~~~~~i~v~-Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~  251 (321)
T 1e6u_A          200 VVWGSGTPMREFLHVD-DMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC  251 (321)
T ss_dssp             EEESCSCCEECEEEHH-HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred             EEcCCCCEEEEeEEHH-HHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence                   112344566 9999988887643211      23678888777544

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.81  E-value=8.6e-19  Score=149.13  Aligned_cols=201  Identities=14%  Similarity=0.110  Sum_probs=142.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      |++|||||+|+||++++++|+++  |++|++++|+.++.+.+..         ..+.++.+|++ +.+++.++++     
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~D~~-d~~~l~~~~~-----   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---------QGVEVRHGDYN-QPESLQKAFA-----   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---------TTCEEEECCTT-CHHHHHHHTT-----
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---------cCCeEEEeccC-CHHHHHHHHh-----
Confidence            57999999999999999999999  9999999998766543321         14667899999 6666665554     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                        ++|++||+|+.. .       . +      ++|+.++.++++++.    +. +.+++|++||.....     ....|+
T Consensus        66 --~~d~vi~~a~~~-~-------~-~------~~n~~~~~~l~~a~~----~~-~~~~~v~~Ss~~~~~-----~~~~y~  118 (287)
T 2jl1_A           66 --GVSKLLFISGPH-Y-------D-N------TLLIVQHANVVKAAR----DA-GVKHIAYTGYAFAEE-----SIIPLA  118 (287)
T ss_dssp             --TCSEEEECCCCC-S-------C-H------HHHHHHHHHHHHHHH----HT-TCSEEEEEEETTGGG-----CCSTHH
T ss_pred             --cCCEEEEcCCCC-c-------C-c------hHHHHHHHHHHHHHH----Hc-CCCEEEEECCCCCCC-----CCCchH
Confidence              689999999852 1       1 1      568888888888762    32 256999999977642     224799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhh--hcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVA--SRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      .+|.+.+.+++.       .|++++.++||.+.++...............  ........+..++ |+++++.+++....
T Consensus       119 ~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~~~~~~  190 (287)
T 2jl1_A          119 HVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRN-ELALAAATVLTEEG  190 (287)
T ss_dssp             HHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHH-HHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHH-HHHHHHHHHhcCCC
Confidence            999999988763       4899999999998765422111111000000  0001223566777 99999999886532


Q ss_pred             CcccccEEEeCCcccCC
Q 023555          256 EYVSGNIFIVDSGATLP  272 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~  272 (280)
                        .+|+.+++.||..++
T Consensus       191 --~~g~~~~i~~~~~~s  205 (287)
T 2jl1_A          191 --HENKTYNLVSNQPWT  205 (287)
T ss_dssp             --CTTEEEEECCSSCBC
T ss_pred             --CCCcEEEecCCCcCC
Confidence              478999999986654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.81  E-value=7.8e-19  Score=160.15  Aligned_cols=230  Identities=17%  Similarity=0.175  Sum_probs=152.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHh---CCeEEEEecChhHHHHHHHHHHhhcCC-------------CcceEEEEe
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKA---GCRIVAAARRVDRLKSLCDEINKQSGS-------------SVRAMAVEL   78 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~---G~~v~l~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~   78 (280)
                      ...++|+||||||+|+||++++++|+++   |++|++++|+...... .+.+.+....             ..++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            3578999999999999999999999999   9999999998664432 2222222211             137889999


Q ss_pred             ccCC-----CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC
Q 023555           79 DVSA-----NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQE  153 (280)
Q Consensus        79 D~~~-----~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  153 (280)
                      |+++     +.+.++++++       ++|+|||+|+....         +.+++.+++|+.++.++++++.     ..+.
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~-----~~~~  206 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIAL-----TTKL  206 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHT-----SSSC
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHH-----hCCC
Confidence            9983     2234444443       68999999998632         2234578999999999998872     2334


Q ss_pred             CeEEEEeccccccCCCC---C-----------------CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          154 GSVINISSIAATSRGQL---P-----------------GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       154 g~vv~vsS~~~~~~~~~---~-----------------~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                      +++|++||...+.....   .                 ....|+.||.+.+.+++.++.+.   |++++.|+||.+..+.
T Consensus       207 ~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          207 KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCC
Confidence            69999999665431100   0                 01349999999999999998875   7999999999997653


Q ss_pred             c-cC-ccchhhhhhhh----h-cCCCC---------------CCCCCChHHHHHHHHHhhcCC--CCcccccEEEeCCcc
Q 023555          214 T-EG-LMKKDWLNNVA----S-RTYPL---------------RDFGTTDPALTSLVRYLVHDS--SEYVSGNIFIVDSGA  269 (280)
Q Consensus       214 ~-~~-~~~~~~~~~~~----~-~~~p~---------------~~~~~~~~~va~~~~~l~s~~--~~~i~G~~i~vdgG~  269 (280)
                      . .. .....++..+.    . ...|.               ..+...+ |+|+++..++...  ...-.|+++++-++.
T Consensus       284 ~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vd-DvA~ai~~~~~~~~~~~~~~~~~ynv~~~~  362 (478)
T 4dqv_A          284 SYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVT-FVAEAIAVLGARVAGSSLAGFATYHVMNPH  362 (478)
T ss_dssp             SSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHH-HHHHHHHHHHHTTC-CCCCSEEEEEESCCC
T ss_pred             ccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHH-HHHHHHHHHHhhcccCCCCCCceEEecCCC
Confidence            2 11 11111221111    1 01121               1223344 8999888876531  123457788887765


Q ss_pred             c
Q 023555          270 T  270 (280)
Q Consensus       270 ~  270 (280)
                      .
T Consensus       363 ~  363 (478)
T 4dqv_A          363 D  363 (478)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.81  E-value=9e-20  Score=154.01  Aligned_cols=198  Identities=18%  Similarity=0.132  Sum_probs=137.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|+||++++++|+ +|++|++++|+.+. +           .  .   +.+|++ +.++++++++..     +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~-----------~--~---~~~Dl~-~~~~~~~~~~~~-----~   57 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q-----------G--G---YKLDLT-DFPRLEDFIIKK-----R   57 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T-----------T--C---EECCTT-SHHHHHHHHHHH-----C
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C-----------C--C---ceeccC-CHHHHHHHHHhc-----C
Confidence            69999999999999999999 48999999998632 0           0  1   789999 678888887764     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC--------CC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL--------PG  172 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~--------~~  172 (280)
                      +|++||+||....     +.+.+++++.+++|+.++..+++++.+     . ++++|++||...+.....        .+
T Consensus        58 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~  126 (273)
T 2ggs_A           58 PDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV-----I-DSYIVHISTDYVFDGEKGNYKEEDIPNP  126 (273)
T ss_dssp             CSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH-----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred             CCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH-----h-CCeEEEEecceeEcCCCCCcCCCCCCCC
Confidence            9999999997521     123467889999999999999998843     2 359999999876542110        12


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcC-C----CCCCCCCChHHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-Y----PLRDFGTTDPALTSLV  247 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~----p~~~~~~~~~~va~~~  247 (280)
                      ...|+.+|++++.+++.    .....+|++.|. |  .+.+...     ......... .    +..++..++ |+|+++
T Consensus       127 ~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-dva~~i  193 (273)
T 2ggs_A          127 INYYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIY-----VYKTLKEGKTVFAFKGYYSPISAR-KLASAI  193 (273)
T ss_dssp             SSHHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHH-----HHHHHHTTCCEEEESCEECCCBHH-HHHHHH
T ss_pred             CCHHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHH-----HHHHHHcCCCEEeecCCCCceEHH-HHHHHH
Confidence            56899999999999887    222344554444 3  2222111     111111110 0    134567787 999999


Q ss_pred             HHhhcCCCCcccccEEEeCCcccC
Q 023555          248 RYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       248 ~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .++++...   +| .+.+++ ..+
T Consensus       194 ~~~~~~~~---~g-~~~i~~-~~~  212 (273)
T 2ggs_A          194 LELLELRK---TG-IIHVAG-ERI  212 (273)
T ss_dssp             HHHHHHTC---CE-EEECCC-CCE
T ss_pred             HHHHhcCc---CC-eEEECC-Ccc
Confidence            99987542   55 788887 443

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.80  E-value=3.4e-19  Score=153.13  Aligned_cols=218  Identities=15%  Similarity=0.133  Sum_probs=146.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+..     ..   +.+|++ +.+.++++++..  .++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~-----~~---~~~d~~-~~~~~~~~~~~~--~~~   67 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD-----LN---IADYMD-KEDFLIQIMAGE--EFG   67 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT-----SC---CSEEEE-HHHHHHHHHTTC--CCS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc-----ce---eccccc-cHHHHHHHHhcc--ccC
Confidence            48999999999999999999999 89999999765421  111211     11   567887 555555554310  023


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------C
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------L  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------~  170 (280)
                      ++|+|||+|+....       ..++++..+++|+.++.++++++.+    .+ . ++|++||...+....         .
T Consensus        68 ~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~  134 (310)
T 1eq2_A           68 DVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSDFIESREYE  134 (310)
T ss_dssp             SCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGTTCCSCBCSSGGGC
T ss_pred             CCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEeeHHHhCCCCCCCCCCCCCC
Confidence            69999999997532       2234577899999999999998743    23 4 999999976543211         1


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhhhhhcC-C-------C-CCCC
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVASRT-Y-------P-LRDF  236 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~-~-------p-~~~~  236 (280)
                      .....|+.+|.+.+.+++.++.+   .|++++.++||.+.++.....     .-..+........ .       . ...+
T Consensus       135 ~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  211 (310)
T 1eq2_A          135 KPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF  211 (310)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEcc
Confidence            12457999999999999998876   389999999999988754310     0011111111110 1       1 2234


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ...+ |+|+++.+++....    |+.+++.+|..++
T Consensus       212 i~v~-Dva~~~~~~~~~~~----~~~~~i~~~~~~s  242 (310)
T 1eq2_A          212 VYVG-DVADVNLWFLENGV----SGIFNLGTGRAES  242 (310)
T ss_dssp             EEHH-HHHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             EEHH-HHHHHHHHHHhcCC----CCeEEEeCCCccC
Confidence            4566 89999988886543    7899998886654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.79  E-value=7.1e-19  Score=149.72  Aligned_cols=199  Identities=17%  Similarity=0.179  Sum_probs=141.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +++|||||+|+||+++++.|+++|++|++++|.                        .+|++ +.+.+.++++..     
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~-d~~~~~~~~~~~-----   55 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDIT-NISQVQQVVQEI-----   55 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTT-CHHHHHHHHHHH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCC-CHHHHHHHHHhc-----
Confidence            389999999999999999999999999999992                        36888 677777777754     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~  170 (280)
                      ++|++||+|+.....     ...+++...+++|+.++.++++++.+    .  +.++|++||...+...         +.
T Consensus        56 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~SS~~vy~~~~~~~~~E~~~~  124 (287)
T 3sc6_A           56 RPHIIIHCAAYTKVD-----QAEKERDLAYVINAIGARNVAVASQL----V--GAKLVYISTDYVFQGDRPEGYDEFHNP  124 (287)
T ss_dssp             CCSEEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHHH----H--TCEEEEEEEGGGSCCCCSSCBCTTSCC
T ss_pred             CCCEEEECCcccChH-----HHhcCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEchhhhcCCCCCCCCCCCCCC
Confidence            799999999975311     11245678899999999999998733    2  3489999997655321         11


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcC-C-----CCCCCCCChHHHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT-Y-----PLRDFGTTDPALT  244 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~-----p~~~~~~~~~~va  244 (280)
                      .+...|+.+|.+.+.+++.++.       ++..++|+.+..+....... .......... .     ....+..++ |+|
T Consensus       125 ~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva  195 (287)
T 3sc6_A          125 APINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVK-TMIRLGKEREEISVVADQIGSPTYVA-DLN  195 (287)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH-HHHHHHTTCSEEEEECSCEECCEEHH-HHH
T ss_pred             CCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHH-HHHHHHHcCCCeEeecCcccCceEHH-HHH
Confidence            2356899999999999987754       35789999987764332211 1111111110 1     112344466 999


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.+++....    ++.+++.+|..++
T Consensus       196 ~~~~~~~~~~~----~~~~~i~~~~~~s  219 (287)
T 3sc6_A          196 VMINKLIHTSL----YGTYHVSNTGSCS  219 (287)
T ss_dssp             HHHHHHHTSCC----CEEEECCCBSCEE
T ss_pred             HHHHHHHhCCC----CCeEEEcCCCccc
Confidence            99999987654    5689998886543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.79  E-value=1.4e-18  Score=149.96  Aligned_cols=213  Identities=19%  Similarity=0.159  Sum_probs=144.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++|||||+|+||++++++|+++  |++|++++|+....+              .+.++.+|++ +.++++++++.     
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------~~~~~~~D~~-d~~~~~~~~~~-----   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------------GIKFITLDVS-NRDEIDRAVEK-----   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------------TCCEEECCTT-CHHHHHHHHHH-----
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------------CceEEEecCC-CHHHHHHHHhh-----
Confidence            4899999999999999999999  899999998754321              2456889999 67777777664     


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------  169 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------  169 (280)
                      .++|+|||+|+....      ...++++..+++|+.++.++++++.+    . +.+++|++||...+....         
T Consensus        61 ~~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~e~~  129 (317)
T 3ajr_A           61 YSIDAIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQ----H-RVEKVVIPSTIGVFGPETPKNKVPSIT  129 (317)
T ss_dssp             TTCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGCCTTSCSSSBCSSS
T ss_pred             cCCcEEEECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHH----c-CCCEEEEecCHHHhCCCCCCCCccccc
Confidence            279999999987421      12356778899999999999998743    2 256999999987654211         


Q ss_pred             -CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc-cCc-c---chhhhhhhhhcC-CC-------CCC
Q 023555          170 -LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT-EGL-M---KKDWLNNVASRT-YP-------LRD  235 (280)
Q Consensus       170 -~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~-~~~-~---~~~~~~~~~~~~-~p-------~~~  235 (280)
                       ..+...|+.+|.+.+.+++.++.++   |++++.++|+.+..+.. ... .   ....+....... .+       ...
T Consensus       130 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (317)
T 3ajr_A          130 ITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALP  206 (317)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEE
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceee
Confidence             1135689999999999999988775   79999998655443221 110 0   001111111111 10       112


Q ss_pred             CCCChHHHHHHHHHhhcCC-CCcccccEEEeCCc
Q 023555          236 FGTTDPALTSLVRYLVHDS-SEYVSGNIFIVDSG  268 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~-~~~i~G~~i~vdgG  268 (280)
                      +...+ |+++++..++... ....+|+.+++.|+
T Consensus       207 ~i~v~-Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          207 MMYMP-DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             EEEHH-HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             eeEHH-HHHHHHHHHHhCCccccccCceEecCCc
Confidence            23355 8888877776543 23446788888764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.78  E-value=2.4e-18  Score=146.25  Aligned_cols=197  Identities=14%  Similarity=0.154  Sum_probs=134.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++|||||+|+||++++++|+++  |++|++++|+.++.+.+..         ..+.++.+|++ +.+++.++++      
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~-d~~~~~~~~~------   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---------QGITVRQADYG-DEAALTSALQ------   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---------TTCEEEECCTT-CHHHHHHHTT------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---------CCCeEEEcCCC-CHHHHHHHHh------
Confidence            4899999999999999999999  9999999998766543321         14667899999 6666665544      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                       ++|++||+|+.. .                ..|+.++.++++++    ++.+ .+++|++||.....     ....|+.
T Consensus        65 -~~d~vi~~a~~~-~----------------~~~~~~~~~l~~a~----~~~~-~~~~v~~Ss~~~~~-----~~~~y~~  116 (286)
T 2zcu_A           65 -GVEKLLLISSSE-V----------------GQRAPQHRNVINAA----KAAG-VKFIAYTSLLHADT-----SPLGLAD  116 (286)
T ss_dssp             -TCSEEEECC-------------------------CHHHHHHHHH----HHHT-CCEEEEEEETTTTT-----CCSTTHH
T ss_pred             -CCCEEEEeCCCC-c----------------hHHHHHHHHHHHHH----HHcC-CCEEEEECCCCCCC-----CcchhHH
Confidence             689999999852 1                02566666666655    3333 57999999976641     2247999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhh--hcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVA--SRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      +|.+.+.+++.       .|++++.++||++.++....+ .........  ........+..++ |+++++.+++.... 
T Consensus       117 sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~~~~~~-  186 (286)
T 2zcu_A          117 EHIETEKMLAD-------SGIVYTLLRNGWYSENYLASA-PAALEHGVFIGAAGDGKIASATRA-DYAAAAARVISEAG-  186 (286)
T ss_dssp             HHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTH-HHHHHHTEEEESCTTCCBCCBCHH-HHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHh-HHhhcCCceeccCCCCccccccHH-HHHHHHHHHhcCCC-
Confidence            99999988864       389999999998876643211 110000100  0001234466777 99999999887532 


Q ss_pred             cccccEEEeCCcccCC
Q 023555          257 YVSGNIFIVDSGATLP  272 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~~  272 (280)
                       .+|+.+.+.||..++
T Consensus       187 -~~g~~~~i~~~~~~s  201 (286)
T 2zcu_A          187 -HEGKVYELAGDSAWT  201 (286)
T ss_dssp             -CTTCEEEECCSSCBC
T ss_pred             -CCCceEEEeCCCcCC
Confidence             478999999986554

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.78  E-value=3.2e-19  Score=153.43  Aligned_cols=217  Identities=12%  Similarity=0.086  Sum_probs=145.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++++||||||+|+||++++++|+++|+      +..              .....+..+.+|++ +.+.+.++++.. 
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~--------------~~~~~~~~~~~D~~-d~~~~~~~~~~~-   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG--------------EDWVFVSSKDADLT-DTAQTRALFEKV-   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT--------------CEEEECCTTTCCTT-SHHHHHHHHHHS-
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc--------------ccccccCceecccC-CHHHHHHHHhhc-
Confidence            46789999999999999999999999998      110              00112333478998 677777777642 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                          ++|+|||+|+.....    ..+.++....+++|+.++.++++++.    +. +.+++|++||...+...       
T Consensus        61 ----~~d~Vih~A~~~~~~----~~~~~~~~~~~~~nv~gt~~ll~a~~----~~-~~~~~v~~SS~~vyg~~~~~~~~E  127 (319)
T 4b8w_A           61 ----QPTHVIHLAAMVGGL----FRNIKYNLDFWRKNVHMNDNVLHSAF----EV-GARKVVSCLSTCIFPDKTTYPIDE  127 (319)
T ss_dssp             ----CCSEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHH----HT-TCSEEEEECCGGGSCSSCCSSBCG
T ss_pred             ----CCCEEEECceecccc----cccccCHHHHHHHHHHHHHHHHHHHH----Hc-CCCeEEEEcchhhcCCCCCCCccc
Confidence                699999999974210    11223456789999999999998873    22 24699999998654311       


Q ss_pred             -------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-----cchhhhhh----hhhc-CC
Q 023555          169 -------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNN----VASR-TY  231 (280)
Q Consensus       169 -------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-----~~~~~~~~----~~~~-~~  231 (280)
                             ..|....|+.+|.+.+.+++.++.+.   |+++..++|+.+..+.....     .-..+...    .... ..
T Consensus       128 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (319)
T 4b8w_A          128 TMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSAL  204 (319)
T ss_dssp             GGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCE
T ss_pred             cccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCce
Confidence                   11122259999999999999998876   79999999999887654311     00112222    1111 11


Q ss_pred             C-------CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 P-------LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 p-------~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +       ...+...+ |+++++..++.... ...|+++++.+|..++
T Consensus       205 ~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~s  250 (319)
T 4b8w_A          205 TVWGTGNPRRQFIYSL-DLAQLFIWVLREYN-EVEPIILSVGEEDEVS  250 (319)
T ss_dssp             EEESCSCCEECEEEHH-HHHHHHHHHHHHCC-CSSCEEECCCGGGCEE
T ss_pred             EEeCCCCeeEEEEeHH-HHHHHHHHHHhccc-cCCceEEEecCCCcee
Confidence            1       12334566 99999988886432 2457788888776543

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.78  E-value=5.1e-19  Score=151.41  Aligned_cols=204  Identities=15%  Similarity=0.082  Sum_probs=142.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      ++|||||+|+||++++++|+ +|++|++++|+..                    .+.+|++ +.++++++++..     +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~-d~~~~~~~~~~~-----~   54 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------------EFCGDFS-NPKGVAETVRKL-----R   54 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------------SSCCCTT-CHHHHHHHHHHH-----C
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------------cccccCC-CHHHHHHHHHhc-----C
Confidence            69999999999999999999 8999999999751                    2468998 677777777653     6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------CC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------LP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------~~  171 (280)
                      +|++||+|+.....     ...++++..+++|+.++.++++++     ++. +.++|++||...+....         ..
T Consensus        55 ~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~vy~~~~~~~~~E~~~~~  123 (299)
T 1n2s_A           55 PDVIVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAA-----NET-GAWVVHYSTDYVFPGTGDIPWQETDATS  123 (299)
T ss_dssp             CSEEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHH-----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCC
T ss_pred             CCEEEECcccCCHh-----hhhcCHHHHHHHHHHHHHHHHHHH-----HHc-CCcEEEEecccEEeCCCCCCCCCCCCCC
Confidence            99999999875211     112345778999999999999987     222 34899999976543211         11


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCC-------CCCCCCChHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYP-------LRDFGTTDPALT  244 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~~va  244 (280)
                      ....|+.+|.+.+.+++.++.       +++.++|+.+.++....+. .......... .+       ...+..++ |++
T Consensus       124 p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~i~v~-Dva  193 (299)
T 1n2s_A          124 PLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFA-KTMLRLAKER-QTLSVINDQYGAPTGAE-LLA  193 (299)
T ss_dssp             CSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH-HHHHHHHHHC-SEEEEECSCEECCEEHH-HHH
T ss_pred             CccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHH-HHHHHHHhcC-CCEEeecCcccCCeeHH-HHH
Confidence            246899999999999887643       7899999999887543221 1111111111 11       12334466 999


Q ss_pred             HHHHHhhcCCCCcc-cccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYV-SGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i-~G~~i~vdgG~~~~  272 (280)
                      +++.+++....... .|+.+++.+|..++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (299)
T 1n2s_A          194 DCTAHAIRVALNKPEVAGLYHLVAGGTTT  222 (299)
T ss_dssp             HHHHHHHHHHHHCGGGCEEEECCCBSCEE
T ss_pred             HHHHHHHHHhccccccCceEEEeCCCCCC
Confidence            99988886432122 57899998886543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.77  E-value=1e-19  Score=154.93  Aligned_cols=209  Identities=14%  Similarity=0.120  Sum_probs=141.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |+++++|||| +|+||++++++|+++|++|++++|+.+.+             ...+.++.+|++ +.+++.++++    
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~Dl~-d~~~~~~~~~----   61 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------------PAGVQTLIADVT-RPDTLASIVH----   61 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------------CTTCCEEECCTT-CGGGCTTGGG----
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccCCceEEccCC-ChHHHHHhhc----
Confidence            3567899999 59999999999999999999999986542             125778899999 6666666554    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------  168 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------  168 (280)
                        +++|+|||+|+..          .++.+..+++|+.++.++++++.     +.+.+++|++||...+...        
T Consensus        62 --~~~d~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~-----~~~~~~~v~~SS~~vyg~~~~~~~~E~  124 (286)
T 3gpi_A           62 --LRPEILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALE-----GAPLQHVFFVSSTGVYGQEVEEWLDED  124 (286)
T ss_dssp             --GCCSEEEECHHHH----------HHC-----CCSHHHHHHHHHHTT-----TSCCCEEEEEEEGGGCCCCCSSEECTT
T ss_pred             --CCCCEEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHh-----hCCCCEEEEEcccEEEcCCCCCCCCCC
Confidence              3699999999863          23446678899999999988872     2335799999997654311        


Q ss_pred             -CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhh-hhcCCCCCCCCCChHHHHHH
Q 023555          169 -QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNV-ASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       169 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~va~~  246 (280)
                       +......|+.+|.+.+.+ +..        ++++.++|+.+..+....+.. ...... .........+...+ |+|++
T Consensus       125 ~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~-Dva~~  193 (286)
T 3gpi_A          125 TPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIR-QAQTPEQWPARNAWTNRIHRD-DGAAF  193 (286)
T ss_dssp             SCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHH-HTTCGGGSCSSBCEECEEEHH-HHHHH
T ss_pred             CCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHH-HHHhcccCCCcCceeEEEEHH-HHHHH
Confidence             112356899999999887 432        789999999987765432111 001100 00001122345566 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.+++........|+.+++.+|..++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~s  219 (286)
T 3gpi_A          194 IAYLIQQRSHAVPERLYIVTDNQPLP  219 (286)
T ss_dssp             HHHHHHHHTTSCCCSEEEECCSCCEE
T ss_pred             HHHHHhhhccCCCCceEEEeCCCCCC
Confidence            99888753334568899998886543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.77  E-value=4.2e-18  Score=162.21  Aligned_cols=179  Identities=15%  Similarity=0.140  Sum_probs=128.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +.+++|+||||||+|+||++++++|+++|++|++++|+........+++....+  .++.++.+|++ +.++++++++..
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~v~~v~~Dl~-d~~~l~~~~~~~   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVDLC-DRKGLEKVFKEY   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT--SCCCEEECCTT-CHHHHHHHHHHS
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC--CceEEEEcCCC-CHHHHHHHHHhC
Confidence            467899999999999999999999999999999999875432222222221111  25667899999 677777776642


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           ++|+|||+||.....     ...+...+.+++|+.++..+++++.    +.+ .+++|++||...+...      
T Consensus        84 -----~~D~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~~iV~~SS~~vyg~~~~~~~~  148 (699)
T 1z45_A           84 -----KIDSVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQ----QYN-VSKFVFSSSATVYGDATRFPNM  148 (699)
T ss_dssp             -----CCCEEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEEEEGGGGCCGGGSTTC
T ss_pred             -----CCCEEEECCcccCcC-----ccccCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEECcHHHhCCCcccccc
Confidence                 799999999975211     1123345689999999999887663    322 5799999997654210      


Q ss_pred             -------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCc
Q 023555          169 -------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSE  212 (280)
Q Consensus       169 -------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~  212 (280)
                             +......|+.+|.+++.+++.++.+. ..++++..++|+.+..+
T Consensus       149 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          149 IPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             CCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence                   11234689999999999999998875 45899999999877654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.77  E-value=4.4e-18  Score=156.34  Aligned_cols=222  Identities=15%  Similarity=0.082  Sum_probs=151.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH---HHHHHHHHHhhc------CCCcceEEEEeccCCCHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR---LKSLCDEINKQS------GSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~---~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      .++||||||+|+||++++++|.+.|++|+++.|+...   .+.+.+.+....      ....++.++.+|++ +.+.+. 
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~-d~~~l~-  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE-CMDDVV-  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTT-BCSSCC-
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCc-ccccCC-
Confidence            5899999999999999999999999999999998763   333333332210      01237889999999 444444 


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-  168 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-  168 (280)
                             ...++|+|||+|+....        ..++...+++|+.++.++++++.+      ...++|++||... ... 
T Consensus       228 -------~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~------~~~~~v~iSS~~v-G~~~  285 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV-GTYF  285 (508)
T ss_dssp             -------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT------TTCEEEEEEESCT-TSEE
T ss_pred             -------CccCCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh------CCCcEEEeCChhh-ccCC
Confidence                   34689999999987521        234567789999999999998743      2579999999776 100 


Q ss_pred             ----------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch--------hhhh
Q 023555          169 ----------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK--------DWLN  224 (280)
Q Consensus       169 ----------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~--------~~~~  224 (280)
                                      +......|+.+|.+.+.+++.++.    .|++++.++||.+..+.....+..        ....
T Consensus       286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~  361 (508)
T 4f6l_B          286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMN  361 (508)
T ss_dssp             CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHH
T ss_pred             ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHH
Confidence                            011456899999999999998754    489999999999987754432110        1111


Q ss_pred             hhhh-cCCCC------CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          225 NVAS-RTYPL------RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       225 ~~~~-~~~p~------~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .... ...|.      ..+...+ |+|.++.+++....   .|+++.+.+|..++
T Consensus       362 ~~~~~~~~~~~~g~~~~~~v~v~-DvA~ai~~~~~~~~---~~~~~nl~~~~~~s  412 (508)
T 4f6l_B          362 DLLQLDCIGVSMAEMPVDFSFVD-TTARQIVALAQVNT---PQIIYHVLSPNKMP  412 (508)
T ss_dssp             HHTTCSEEETTGGGSEEECEEHH-HHHHHHHHHTTBCC---SCSEEEESCSCEEE
T ss_pred             HHHHcCCCCCCccCceEEEEcHH-HHHHHHHHHHhCCC---CCCEEEeCCCCCCC
Confidence            1111 11122      1234455 99999999987554   78899998886543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.76  E-value=1.6e-19  Score=155.88  Aligned_cols=219  Identities=14%  Similarity=0.071  Sum_probs=138.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++++||||||+|+||++++++|+++|++|++++|+..........+.... ....+.++.+|++              
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~--------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS--------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT--------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc--------------
Confidence            3568999999999999999999999999999999997641000000000000 0011222222222              


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                          ++|+|||+|+........     ++....++ |+.++.++++++..    .+ .+++|++||...+...       
T Consensus        69 ----~~d~vi~~a~~~~~~~~~-----~~~~~~~~-n~~~~~~ll~a~~~----~~-v~~~v~~SS~~v~~~~~~~~~~E  133 (321)
T 3vps_A           69 ----DVRLVYHLASHKSVPRSF-----KQPLDYLD-NVDSGRHLLALCTS----VG-VPKVVVGSTCEVYGQADTLPTPE  133 (321)
T ss_dssp             ----TEEEEEECCCCCCHHHHT-----TSTTTTHH-HHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----cCCEEEECCccCChHHHH-----hCHHHHHH-HHHHHHHHHHHHHH----cC-CCeEEEecCHHHhCCCCCCCCCC
Confidence                799999999875321101     11123456 99999988888733    22 4699999997654321       


Q ss_pred             --CCCCCCCChhhHHHHHHHHHHHHHHhCCCCe-EEEEeecCcccCccccCc-cchhhhhhhhhcC-C-------CCCCC
Q 023555          169 --QLPGGVAYASSKAGLNAMTKCLSLELGVHKI-RVNSICPGLFKSEITEGL-MKKDWLNNVASRT-Y-------PLRDF  236 (280)
Q Consensus       169 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi-~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~-------p~~~~  236 (280)
                        +......|+.+|.+.+.+++.++.+.   |+ +++.++|+.+..+..... ....+........ .       ....+
T Consensus       134 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (321)
T 3vps_A          134 DSPLSPRSPYAASKVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDF  210 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHSS---SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEce
Confidence              11235689999999999999998874   78 999999999987654321 1111111111110 1       11234


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ..++ |+|+++.+++.....   | .+++.+|..++
T Consensus       211 v~v~-Dva~~~~~~~~~~~~---g-~~~i~~~~~~s  241 (321)
T 3vps_A          211 TYIT-DVVDKLVALANRPLP---S-VVNFGSGQSLS  241 (321)
T ss_dssp             EEHH-HHHHHHHHGGGSCCC---S-EEEESCSCCEE
T ss_pred             EEHH-HHHHHHHHHHhcCCC---C-eEEecCCCccc
Confidence            4566 999999999876543   7 99999887543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.75  E-value=9.4e-18  Score=143.69  Aligned_cols=207  Identities=13%  Similarity=0.061  Sum_probs=134.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||||+|+||++++++|+++| ++|++++|+.++...  +.+..     ..+.++.+|++ +.+++.++++     
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~-----~~~~~~~~D~~-d~~~l~~~~~-----   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL-----QGAEVVQGDQD-DQVIMELALN-----   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH-----TTCEEEECCTT-CHHHHHHHHT-----
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH-----CCCEEEEecCC-CHHHHHHHHh-----
Confidence            5899999999999999999999999 999999998765431  22221     14667899999 6677666654     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                        ++|++||+++....      .       ..+.|+.+...++    +.+++.+ .+++|++|+..............|.
T Consensus        72 --~~d~vi~~a~~~~~------~-------~~~~~~~~~~~~~----~aa~~~g-v~~iv~~S~~~~~~~~~~~~~~~y~  131 (299)
T 2wm3_A           72 --GAYATFIVTNYWES------C-------SQEQEVKQGKLLA----DLARRLG-LHYVVYSGLENIKKLTAGRLAAAHF  131 (299)
T ss_dssp             --TCSEEEECCCHHHH------T-------CHHHHHHHHHHHH----HHHHHHT-CSEEEECCCCCHHHHTTTSCCCHHH
T ss_pred             --cCCEEEEeCCCCcc------c-------cchHHHHHHHHHH----HHHHHcC-CCEEEEEcCccccccCCCcccCchh
Confidence              68999999975311      0       1233444444444    4444433 5799996664432211111246799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhh-hhhcCCCCC----CCCCChHHHHHHHHHhhc
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNN-VASRTYPLR----DFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~p~~----~~~~~~~~va~~~~~l~s  252 (280)
                      .+|.+++.+++.       .|++++.|+||.+.+++...+........ ......|.+    .+..++ |+|+++..++.
T Consensus       132 ~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~  203 (299)
T 2wm3_A          132 DGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVS-DLGPVVLSLLK  203 (299)
T ss_dssp             HHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGG-GHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHH-HHHHHHHHHHc
Confidence            999999988764       27999999999998876432211100000 000012222    345677 99999988886


Q ss_pred             CCCCcccccEEEeCC
Q 023555          253 DSSEYVSGNIFIVDS  267 (280)
Q Consensus       253 ~~~~~i~G~~i~vdg  267 (280)
                      ... ...|+.+.+.|
T Consensus       204 ~~~-~~~g~~~~~~g  217 (299)
T 2wm3_A          204 MPE-KYVGQNIGLST  217 (299)
T ss_dssp             SHH-HHTTCEEECCS
T ss_pred             Chh-hhCCeEEEeee
Confidence            432 23688999876

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.72  E-value=2.8e-17  Score=144.13  Aligned_cols=208  Identities=12%  Similarity=0.085  Sum_probs=133.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEec-cCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD-VSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~   95 (280)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++..  .+.+..    ...+..+.+| ++ +.+++.++++   
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~----~~~v~~v~~D~l~-d~~~l~~~~~---   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA----IPNVTLFQGPLLN-NVPLMDTLFE---   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT----STTEEEEESCCTT-CHHHHHHHHT---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh----cCCcEEEECCccC-CHHHHHHHHh---
Confidence            45789999999999999999999999999999999876542  122321    1256778999 98 6677766654   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc-ccCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~-~~~~~~~~~~  174 (280)
                          .+|++|||++...       .         +.|..+ .++++    .+++.+..+++|++||... ..  ..+...
T Consensus        73 ----~~d~Vi~~a~~~~-------~---------~~~~~~-~~l~~----aa~~~g~v~~~V~~SS~~~~~~--~~~~~~  125 (352)
T 1xgk_A           73 ----GAHLAFINTTSQA-------G---------DEIAIG-KDLAD----AAKRAGTIQHYIYSSMPDHSLY--GPWPAV  125 (352)
T ss_dssp             ----TCSEEEECCCSTT-------S---------CHHHHH-HHHHH----HHHHHSCCSEEEEEECCCGGGT--SSCCCC
T ss_pred             ----cCCEEEEcCCCCC-------c---------HHHHHH-HHHHH----HHHHcCCccEEEEeCCcccccc--CCCCCc
Confidence                6899999987531       0         113333 44444    4444321469999999762 22  223446


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---chh-hhhhhhhcCCCC-----CCCCCChHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---KKD-WLNNVASRTYPL-----RDFGTTDPALTS  245 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---~~~-~~~~~~~~~~p~-----~~~~~~~~~va~  245 (280)
                      .|..+|.+.+.+++..       |++++.|+||++.+.......   ... ..........|.     ..+..+.+|+|+
T Consensus       126 ~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~  198 (352)
T 1xgk_A          126 PMWAPKFTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGP  198 (352)
T ss_dssp             TTTHHHHHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHH
Confidence            8999999999888752       799999999987554432210   000 000000000011     123344139999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCc
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                      ++..++........|+.+.+.++
T Consensus       199 ai~~~l~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          199 ALLQIFKDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHHHHHHCHHHHTTCEEEECSE
T ss_pred             HHHHHHhCCchhhCCeEEEEecC
Confidence            99888865433457888988865

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.71  E-value=4.8e-17  Score=138.56  Aligned_cols=197  Identities=15%  Similarity=0.175  Sum_probs=128.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +||||||+|+||+++++.|.+. |++|++++|+.++...+.         ...+.++.+|++ +.+++.++++       
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~---------~~~v~~~~~D~~-d~~~l~~~~~-------   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW---------RGKVSVRQLDYF-NQESMVEAFK-------   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG---------BTTBEEEECCTT-CHHHHHHHTT-------
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh---------hCCCEEEEcCCC-CHHHHHHHHh-------
Confidence            5999999999999999999998 999999999987643321         125788999999 6666666554       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|+|||+++....        .       ..|+.++..+++    .+++.+ .+++|++||.....      ...|..+
T Consensus        65 ~~d~vi~~a~~~~~--------~-------~~~~~~~~~l~~----aa~~~g-v~~iv~~Ss~~~~~------~~~~~~~  118 (289)
T 3e48_A           65 GMDTVVFIPSIIHP--------S-------FKRIPEVENLVY----AAKQSG-VAHIIFIGYYADQH------NNPFHMS  118 (289)
T ss_dssp             TCSEEEECCCCCCS--------H-------HHHHHHHHHHHH----HHHHTT-CCEEEEEEESCCST------TCCSTTH
T ss_pred             CCCEEEEeCCCCcc--------c-------hhhHHHHHHHHH----HHHHcC-CCEEEEEcccCCCC------CCCCccc
Confidence            78999999986421        1       124455544444    445433 57999999965322      1223444


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCC----CCCChHHHHHHHHHhhcCCC
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRD----FGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~~va~~~~~l~s~~~  255 (280)
                      +...     .+...+...|++++.++||.+.+++.....  .... ......|.++    +..++ |+|+++.+++....
T Consensus       119 ~~~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~--~~~~-~~~~~~~~g~~~~~~i~~~-Dva~~~~~~l~~~~  189 (289)
T 3e48_A          119 PYFG-----YASRLLSTSGIDYTYVRMAMYMDPLKPYLP--ELMN-MHKLIYPAGDGRINYITRN-DIARGVIAIIKNPD  189 (289)
T ss_dssp             HHHH-----HHHHHHHHHCCEEEEEEECEESTTHHHHHH--HHHH-HTEECCCCTTCEEEEECHH-HHHHHHHHHHHCGG
T ss_pred             hhHH-----HHHHHHHHcCCCEEEEeccccccccHHHHH--HHHH-CCCEecCCCCceeeeEEHH-HHHHHHHHHHcCCC
Confidence            4221     122223345899999999999887542111  1111 1111133333    55677 99999999987654


Q ss_pred             CcccccEEEeCCcccCC
Q 023555          256 EYVSGNIFIVDSGATLP  272 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~~  272 (280)
                      .+  |+.+.+. |..++
T Consensus       190 ~~--g~~~~~~-~~~~s  203 (289)
T 3e48_A          190 TW--GKRYLLS-GYSYD  203 (289)
T ss_dssp             GT--TCEEEEC-CEEEE
T ss_pred             cC--CceEEeC-CCcCC
Confidence            33  8899998 76543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.69  E-value=8.5e-16  Score=130.50  Aligned_cols=196  Identities=11%  Similarity=0.048  Sum_probs=132.6

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++|||||+ |+||++++++|.++|++|++++|+..+...+..         ..+.++.+|++ +.+            +.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~-d~~------------~~   62 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---------SGAEPLLWPGE-EPS------------LD   62 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---------TTEEEEESSSS-CCC------------CT
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---------CCCeEEEeccc-ccc------------cC
Confidence            68999998 999999999999999999999999877655432         15778899998 421            45


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEeccccccCC---------C
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-NQEGSVINISSIAATSRG---------Q  169 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~vv~vsS~~~~~~~---------~  169 (280)
                      ++|+|||+|+.....      ..  .              .+.++..+++. .+.+++|++||...+...         +
T Consensus        63 ~~d~vi~~a~~~~~~------~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~  120 (286)
T 3ius_A           63 GVTHLLISTAPDSGG------DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTP  120 (286)
T ss_dssp             TCCEEEECCCCBTTB------CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSC
T ss_pred             CCCEEEECCCccccc------cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCC
Confidence            899999999865221      00  0              12333334331 225799999997654311         1


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhh---hhcCCCCCCCCCChHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNV---ASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~va~~  246 (280)
                      ......|+.+|.+.+.+++.+      .|++++.++|+.+..+....+..  .....   ....-....+...+ |++++
T Consensus       121 ~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~-Dva~a  191 (286)
T 3ius_A          121 LTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSK--LGKGGIRRIIKPGQVFSRIHVE-DIAQV  191 (286)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTT--SSSSCCCEEECTTCCBCEEEHH-HHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHH--HhcCCccccCCCCcccceEEHH-HHHHH
Confidence            122356999999999988876      58999999999997765332110  00000   00000122344456 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.+++....   .|+.+++.+|..++
T Consensus       192 ~~~~~~~~~---~g~~~~i~~~~~~s  214 (286)
T 3ius_A          192 LAASMARPD---PGAVYNVCDDEPVP  214 (286)
T ss_dssp             HHHHHHSCC---TTCEEEECCSCCBC
T ss_pred             HHHHHhCCC---CCCEEEEeCCCCcc
Confidence            999887554   68899998887654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.68  E-value=6.8e-16  Score=132.41  Aligned_cols=198  Identities=13%  Similarity=0.198  Sum_probs=125.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-------hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-------DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+.+ +++..     ..+.++.+|++ +.+++.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~-----~~v~~v~~D~~-d~~~l~~~~   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS-----LGVILLEGDIN-DHETLVKAI   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH-----TTCEEEECCTT-CHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh-----CCCEEEEeCCC-CHHHHHHHH
Confidence            46899999999999999999999999999999986       444332 23322     14677899998 666666665


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC----
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR----  167 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~----  167 (280)
                      +       ++|++||+++...                    +.+...+++++    ++.+.-+++|.  |..+...    
T Consensus        75 ~-------~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~  121 (307)
T 2gas_A           75 K-------QVDIVICAAGRLL--------------------IEDQVKIIKAI----KEAGNVKKFFP--SEFGLDVDRHD  121 (307)
T ss_dssp             T-------TCSEEEECSSSSC--------------------GGGHHHHHHHH----HHHCCCSEEEC--SCCSSCTTSCC
T ss_pred             h-------CCCEEEECCcccc--------------------cccHHHHHHHH----HhcCCceEEee--cccccCccccc
Confidence            4       6999999998641                    23444455544    33321357763  4333210    


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh--h-hh---hhhhcCCCCCCCCCChH
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD--W-LN---NVASRTYPLRDFGTTDP  241 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~--~-~~---~~~~~~~p~~~~~~~~~  241 (280)
                      ...|....| .+|.+++.+++.       .|++++.++||++.+.+...+....  . ..   ...........+..++ 
T Consensus       122 ~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-  192 (307)
T 2gas_A          122 AVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEA-  192 (307)
T ss_dssp             CCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHH-
T ss_pred             CCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHH-
Confidence            012224578 999999887753       2789999999998876543221100  0 00   0000001123345676 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      |+|+.+..++....  ..|+.+.+.|
T Consensus       193 Dva~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          193 DVGTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHHcCcc--ccCceEEEeC
Confidence            99999999886532  2467777765

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.67  E-value=1.6e-15  Score=132.51  Aligned_cols=207  Identities=14%  Similarity=0.081  Sum_probs=132.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh----hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV----DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      |..++||||||+|+||+++++.|+++|++|++++|+.    ++.+. .+.+..     ..+.++.+|++ +.+++.++++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~~-----~~v~~~~~Dl~-d~~~l~~~~~   80 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALED-----KGAIIVYGLIN-EQEAMEKILK   80 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHHH-----TTCEEEECCTT-CHHHHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHHh-----CCcEEEEeecC-CHHHHHHHHh
Confidence            4578999999999999999999999999999999976    33332 222322     25788999999 6777777776


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc---CCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS---RGQ  169 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~---~~~  169 (280)
                      +.     ++|+|||+++..                    |+.+..++++++..    .+.-.++|+ |+ .+..   ..+
T Consensus        81 ~~-----~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~-~g~~~~e~~~  129 (346)
T 3i6i_A           81 EH-----EIDIVVSTVGGE--------------------SILDQIALVKAMKA----VGTIKRFLP-SE-FGHDVNRADP  129 (346)
T ss_dssp             HT-----TCCEEEECCCGG--------------------GGGGHHHHHHHHHH----HCCCSEEEC-SC-CSSCTTTCCC
T ss_pred             hC-----CCCEEEECCchh--------------------hHHHHHHHHHHHHH----cCCceEEee-cc-cCCCCCccCc
Confidence            42     799999999862                    77788888777632    221346665 43 3321   011


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhh------hhhhhcCCCCCCCCCChHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWL------NNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~------~~~~~~~~p~~~~~~~~~~v  243 (280)
                      .+....|+.+|.+++.+.+.       .|+++..++||.+..............      ............+..++ |+
T Consensus       130 ~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~-Dv  201 (346)
T 3i6i_A          130 VEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGT-DI  201 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHH-HH
T ss_pred             CCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHH-HH
Confidence            23446899999998887764       479999999998876543322111000      00010111123355666 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCC-cccC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDS-GATL  271 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdg-G~~~  271 (280)
                      |+.+..++... . ..|+.+.+-| |..+
T Consensus       202 a~~~~~~l~~~-~-~~~~~~~i~g~~~~~  228 (346)
T 3i6i_A          202 GKFTMKTVDDV-R-TLNKSVHFRPSCNCL  228 (346)
T ss_dssp             HHHHHHHTTCG-G-GTTEEEECCCGGGEE
T ss_pred             HHHHHHHHhCc-c-ccCeEEEEeCCCCCC
Confidence            99999988654 2 2356666653 4443

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.66  E-value=3.1e-16  Score=138.23  Aligned_cols=192  Identities=15%  Similarity=0.143  Sum_probs=135.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +||||||+|+||++++++|+++|+ +|+.++|+                            + +.++++++++       
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~-d~~~l~~~~~-------   45 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------T-KEEELESALL-------   45 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------C-CHHHHHHHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------C-CHHHHHHHhc-------
Confidence            699999999999999999999999 88888775                            2 4566666665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhh
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASS  179 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~s  179 (280)
                      ++|++||+|+...+.         +....+++|+.++.++++++    ++.+...++|++||.....      ...|+.+
T Consensus        46 ~~d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~------~~~Y~~s  106 (369)
T 3st7_A           46 KADFIVHLAGVNRPE---------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ------DNPYGES  106 (369)
T ss_dssp             HCSEEEECCCSBCTT---------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS------CSHHHHH
T ss_pred             cCCEEEECCcCCCCC---------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC------CCCchHH
Confidence            489999999976321         22335778999999888877    2322224899999977643      4579999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc---chhhhhhhhhc-CCCC------CCCCCChHHHHHHHHH
Q 023555          180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM---KKDWLNNVASR-TYPL------RDFGTTDPALTSLVRY  249 (280)
Q Consensus       180 K~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~---~~~~~~~~~~~-~~p~------~~~~~~~~~va~~~~~  249 (280)
                      |.+.+.+++.++.+.   |+++..++|+.+..+......   -..+....... ..+.      ..+..++ |+|+++..
T Consensus       107 K~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~  182 (369)
T 3st7_A          107 KLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVD-DIVAEIKR  182 (369)
T ss_dssp             HHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHH-HHHHHHHH
Confidence            999999999999885   789999999998776543211   11111111111 1111      1233455 99999988


Q ss_pred             hhcCCCCcccccEEEeCCcccCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++..... ..|+.+.+.+|..++
T Consensus       183 ~l~~~~~-~~~~~~~i~~~~~~s  204 (369)
T 3st7_A          183 AIEGTPT-IENGVPTVPNVFKVT  204 (369)
T ss_dssp             HHHTCCC-EETTEECCSCCEEEE
T ss_pred             HHhCCcc-cCCceEEeCCCCcee
Confidence            8865432 247889998876543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.63  E-value=3.3e-15  Score=128.48  Aligned_cols=202  Identities=10%  Similarity=0.161  Sum_probs=126.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-----hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-----DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++||||+|+||++++++|+++|++|++++|+.     ++.+.+ +.+..     ..+.++.+|++ +.+++.++++ 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~-----~~~~~~~~D~~-d~~~l~~~~~-   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFKQ-----LGAKLIEASLD-DHQRLVDALK-   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHHT-----TTCEEECCCSS-CHHHHHHHHT-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHHh-----CCeEEEeCCCC-CHHHHHHHHh-
Confidence            46799999999999999999999999999999984     333222 22221     24677899999 6676666654 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ----  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~----  169 (280)
                            ++|++||+++.....                .|+.+...+++++    ++.+.-+++|+  |..+.....    
T Consensus        76 ------~~d~vi~~a~~~~~~----------------~~~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~  127 (313)
T 1qyd_A           76 ------QVDVVISALAGGVLS----------------HHILEQLKLVEAI----KEAGNIKRFLP--SEFGMDPDIMEHA  127 (313)
T ss_dssp             ------TCSEEEECCCCSSSS----------------TTTTTHHHHHHHH----HHSCCCSEEEC--SCCSSCTTSCCCC
T ss_pred             ------CCCEEEECCccccch----------------hhHHHHHHHHHHH----HhcCCCceEEe--cCCcCCccccccC
Confidence                  699999999875221                1566666666655    33321467874  433321111    


Q ss_pred             -CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh----hhhh---hhhcCCCCCCCCCChH
Q 023555          170 -LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD----WLNN---VASRTYPLRDFGTTDP  241 (280)
Q Consensus       170 -~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~----~~~~---~~~~~~p~~~~~~~~~  241 (280)
                       .|....| .+|.+++.+++.       .|++++.++||++.+.+...+....    ....   ..........+..++ 
T Consensus       128 ~~p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~-  198 (313)
T 1qyd_A          128 LQPGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDED-  198 (313)
T ss_dssp             CSSTTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHH-
T ss_pred             CCCCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHH-
Confidence             1334568 999999887752       3788999999988654432211100    0000   000000112345566 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      |+++++..++....  ..|+.+.+.|
T Consensus       199 Dva~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          199 DVGTYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHHHHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHHHHHHhCcc--cCCceEEEeC
Confidence            99999988886432  2366777765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.61  E-value=2e-14  Score=126.07  Aligned_cols=216  Identities=12%  Similarity=0.077  Sum_probs=136.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhC-----CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAG-----CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G-----~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +|++|||||+|+||++++++|+++|     ++|++++|+.....     .     ...++.++.+|++ +.+++.++++.
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-----~~~~~~~~~~Dl~-d~~~~~~~~~~   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-----EDNPINYVQCDIS-DPDDSQAKLSP   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-----CSSCCEEEECCTT-SHHHHHHHHTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-----ccCceEEEEeecC-CHHHHHHHHhc
Confidence            5789999999999999999999999     99999999865422     0     1235778899999 66666655542


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEE-------EEecccccc
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVI-------NISSIAATS  166 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv-------~vsS~~~~~  166 (280)
                          .+++|++||+|+...          ++....+++|+.++.++++++.+..   .+-.++|       ++||...+.
T Consensus        70 ----~~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~---~~~~~~v~~~g~~i~~Ss~~vyg  132 (364)
T 2v6g_A           70 ----LTDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNC---PNLKHISLQTGRKHYMGPFESYG  132 (364)
T ss_dssp             ----CTTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTC---TTCCEEEEECCTHHHHCCGGGTT
T ss_pred             ----CCCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhc---cccceEEeccCceEEEechhhcc
Confidence                224999999998741          1346788999999999999884321   0234676       688865432


Q ss_pred             CC-----C-------CCCCCCChhhHHHHHHHHHHHHHHhCCCC-eEEEEeecCcccCccccCccc---hhhhhhhh---
Q 023555          167 RG-----Q-------LPGGVAYASSKAGLNAMTKCLSLELGVHK-IRVNSICPGLFKSEITEGLMK---KDWLNNVA---  227 (280)
Q Consensus       167 ~~-----~-------~~~~~~Y~~sK~a~~~l~~~la~~~~~~g-i~vn~v~pG~v~t~~~~~~~~---~~~~~~~~---  227 (280)
                      ..     +       .+....|    .+.+.+++.++.   ..+ +++..++|+.+..+.......   ...+....   
T Consensus       133 ~~~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  205 (364)
T 2v6g_A          133 KIESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKH  205 (364)
T ss_dssp             TSCCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHh
Confidence            11     0       0112234    234444444442   245 999999999998765433211   01111111   


Q ss_pred             -hcCCC-CC------CCCCC---hHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          228 -SRTYP-LR------DFGTT---DPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       228 -~~~~p-~~------~~~~~---~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       ....+ .+      .+...   + |+|+++..++...  ...|+.+++.+|..++
T Consensus       206 ~g~~~~~~g~~~~~~~~~~~~~v~-Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s  258 (364)
T 2v6g_A          206 EGKVLRFTGCKAAWDGYSDCSDAD-LIAEHHIWAAVDP--YAKNEAFNVSNGDVFK  258 (364)
T ss_dssp             HTCCBCCCSCHHHHHSCBCCEEHH-HHHHHHHHHHHCG--GGTTEEEEECCSCCBC
T ss_pred             cCCceecCCCcccccccCCCCcHH-HHHHHHHHHHhCC--CCCCceEEecCCCcCC
Confidence             11111 11      11222   4 7999888887532  2368899998886543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.60  E-value=1.8e-15  Score=130.63  Aligned_cols=203  Identities=8%  Similarity=0.078  Sum_probs=123.9

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-h----HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-D----RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++||||+|+||++++++|+++|++|++++|+. .    ...+..+.+..     ..+.++.+|++ +.+++.++++ 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~-----~~v~~v~~D~~-d~~~l~~a~~-   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS-----MGVTIIEGEME-EHEKMVSVLK-   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH-----TTCEEEECCTT-CHHHHHHHHT-
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc-----CCcEEEEecCC-CHHHHHHHHc-
Confidence            46799999999999999999999999999999986 1    22222222221     14678899999 6677666655 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----C
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----Q  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----~  169 (280)
                            ++|+|||+++...                    +.+...+++++    .+.+.-+++|  .|..+....    .
T Consensus        77 ------~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~~~~  124 (321)
T 3c1o_A           77 ------QVDIVISALPFPM--------------------ISSQIHIINAI----KAAGNIKRFL--PSDFGCEEDRIKPL  124 (321)
T ss_dssp             ------TCSEEEECCCGGG--------------------SGGGHHHHHHH----HHHCCCCEEE--CSCCSSCGGGCCCC
T ss_pred             ------CCCEEEECCCccc--------------------hhhHHHHHHHH----HHhCCccEEe--ccccccCccccccC
Confidence                  6899999998631                    23344444443    4432135777  343332100    0


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------hhhhhhhhhcCCCCCCCCCChHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------KDWLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      .|....| .+|.+++.+++.       .|++++.|+||++.......+..      ................+..++ |+
T Consensus       125 ~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dv  195 (321)
T 3c1o_A          125 PPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE-DI  195 (321)
T ss_dssp             HHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHH-HH
T ss_pred             CCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHH-HH
Confidence            1113478 999999988763       26888889999876543211000      000000000001123355676 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCC-cccC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDS-GATL  271 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdg-G~~~  271 (280)
                      |+++..++....  ..|+.+.+.| |..+
T Consensus       196 a~~~~~~l~~~~--~~g~~~~~~g~~~~~  222 (321)
T 3c1o_A          196 AKYTIKVACDPR--CCNRIVIYRPPKNII  222 (321)
T ss_dssp             HHHHHHHHHCGG--GTTEEEECCCGGGEE
T ss_pred             HHHHHHHHhCcc--ccCeEEEEeCCCCcc
Confidence            999999886542  2477888876 4433

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.58  E-value=2.8e-14  Score=131.19  Aligned_cols=207  Identities=16%  Similarity=0.116  Sum_probs=133.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++||||||+|+||+++++.|+++|++|++++|+..+.+                 .+.+|+.+.   .       .+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-----------------~v~~d~~~~---~-------~~~l  199 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-----------------KRFWDPLNP---A-------SDLL  199 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-----------------CEECCTTSC---C-------TTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-----------------ceeecccch---h-------HHhc
Confidence            679999999999999999999999999999999865421                 145666521   1       2233


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc-CC--------C
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS-RG--------Q  169 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~-~~--------~  169 (280)
                      .++|+|||+|+.....    ..+.+.....+++|+.++.++++++.    +..+.+++|++||...+. ..        .
T Consensus       200 ~~~D~Vih~A~~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~a~a----~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~  271 (516)
T 3oh8_A          200 DGADVLVHLAGEPIFG----RFNDSHKEAIRESRVLPTKFLAELVA----ESTQCTTMISASAVGFYGHDRGDEILTEES  271 (516)
T ss_dssp             TTCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH----HCSSCCEEEEEEEGGGGCSEEEEEEECTTS
T ss_pred             CCCCEEEECCCCcccc----ccchhHHHHHHHHHHHHHHHHHHHHH----hcCCCCEEEEeCcceEecCCCCCCccCCCC
Confidence            5899999999875221    33456678899999999999999743    233357999999976543 00        0


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhh-cCCCC------CCCCCChHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS-RTYPL------RDFGTTDPA  242 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~p~------~~~~~~~~~  242 (280)
                      ......|+.+|...+.+.+..    ...|++++.+.||.+.++... .. ..+...... ...+.      ..+...+ |
T Consensus       272 ~~~~~~y~~~~~~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~-~~-~~~~~~~~~g~~~~~g~g~~~~~~i~v~-D  344 (516)
T 3oh8_A          272 ESGDDFLAEVCRDWEHATAPA----SDAGKRVAFIRTGVALSGRGG-ML-PLLKTLFSTGLGGKFGDGTSWFSWIAID-D  344 (516)
T ss_dssp             CCCSSHHHHHHHHHHHTTHHH----HHTTCEEEEEEECEEEBTTBS-HH-HHHHHTTC---CCCCTTSCCEECEEEHH-H
T ss_pred             CCCcChHHHHHHHHHHHHHHH----HhCCCCEEEEEeeEEECCCCC-hH-HHHHHHHHhCCCcccCCCCceEceEeHH-H
Confidence            113446777787777665433    335899999999999886521 11 111110000 00111      1234456 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +++++.+++....  ..| .+++-+|..
T Consensus       345 va~ai~~~l~~~~--~~g-~~ni~~~~~  369 (516)
T 3oh8_A          345 LTDIYYRAIVDAQ--ISG-PINAVAPNP  369 (516)
T ss_dssp             HHHHHHHHHHCTT--CCE-EEEESCSCC
T ss_pred             HHHHHHHHHhCcc--cCC-cEEEECCCC
Confidence            9999988886442  345 566655544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.57  E-value=8.2e-15  Score=125.65  Aligned_cols=199  Identities=12%  Similarity=0.142  Sum_probs=120.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-----HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++||||+|+||++++++|+++|++|++++|+...     ..+..+.+..     ..+.++.+|++ +.+++.++++ 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~-----~~v~~v~~D~~-d~~~l~~~~~-   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA-----SGANIVHGSID-DHASLVEAVK-   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT-----TTCEEECCCTT-CHHHHHHHHH-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh-----CCCEEEEeccC-CHHHHHHHHc-
Confidence            4689999999999999999999999999999997432     1111222221     24677899998 6777776665 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----C
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----Q  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----~  169 (280)
                            ++|++||+++...                    +.+...+++++    ++.+..+++|+ |+ .+....    .
T Consensus        77 ------~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~-S~-~g~~~~~~~~~  124 (308)
T 1qyc_A           77 ------NVDVVISTVGSLQ--------------------IESQVNIIKAI----KEVGTVKRFFP-SE-FGNDVDNVHAV  124 (308)
T ss_dssp             ------TCSEEEECCCGGG--------------------SGGGHHHHHHH----HHHCCCSEEEC-SC-CSSCTTSCCCC
T ss_pred             ------CCCEEEECCcchh--------------------hhhHHHHHHHH----HhcCCCceEee-cc-cccCccccccC
Confidence                  6899999998631                    22334444444    33322457773 43 331110    1


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh------hhhhhhhcCCCCCCCCCChHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD------WLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      .|....| .+|.+++.+++.       .|++++.++||++.+..........      ..............+..++ |+
T Consensus       125 ~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dv  195 (308)
T 1qyc_A          125 EPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEE-DI  195 (308)
T ss_dssp             TTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHH-HH
T ss_pred             CcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHH-HH
Confidence            1223468 999999887763       2688899999987654332211100      0000000001112344556 99


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCC
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      ++.+..++...  ...|+.+.+.|
T Consensus       196 a~~~~~~l~~~--~~~~~~~~~~g  217 (308)
T 1qyc_A          196 GTFTIKAVDDP--RTLNKTLYLRL  217 (308)
T ss_dssp             HHHHHTTSSCG--GGTTEEEECCC
T ss_pred             HHHHHHHHhCc--cccCeEEEEeC
Confidence            99998888643  22366777765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.55  E-value=5.3e-15  Score=127.58  Aligned_cols=198  Identities=11%  Similarity=0.117  Sum_probs=119.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |+++||||+|+||++++++|+++|++|++++|+.....+..+++..     ..+.++.+|++ +.+++.++++       
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-----~~v~~v~~Dl~-d~~~l~~a~~-------   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-----LGAIIVKGELD-EHEKLVELMK-------   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-----TTCEEEECCTT-CHHHHHHHHT-------
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-----CCCEEEEecCC-CHHHHHHHHc-------
Confidence            6799999999999999999999999999999987522222222322     14677899999 6677666654       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC-C---CCCCC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ-L---PGGVA  175 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~-~---~~~~~  175 (280)
                      ++|+|||+++...                    +.+...+++++    ++.+..+++|+  |..+..... .   |....
T Consensus        79 ~~d~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~~~~  132 (318)
T 2r6j_A           79 KVDVVISALAFPQ--------------------ILDQFKILEAI----KVAGNIKRFLP--SDFGVEEDRINALPPFEAL  132 (318)
T ss_dssp             TCSEEEECCCGGG--------------------STTHHHHHHHH----HHHCCCCEEEC--SCCSSCTTTCCCCHHHHHH
T ss_pred             CCCEEEECCchhh--------------------hHHHHHHHHHH----HhcCCCCEEEe--eccccCcccccCCCCcchh
Confidence            6999999998631                    22333444443    44321457774  333311000 1   11346


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhh---hhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN---NVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      | .+|.+++.+++.       .|++++.++||++...+...+.......   ...........+..++ |++..+..++.
T Consensus       133 y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~  203 (318)
T 2r6j_A          133 I-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQ-DIGLYTIKVAT  203 (318)
T ss_dssp             H-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHH-HHHHHHHHHTT
T ss_pred             H-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHH-HHHHHHHHHhc
Confidence            8 899998887753       3788899999987543221100000000   0000001122345566 99999999886


Q ss_pred             CCCCcccccEEEeCC
Q 023555          253 DSSEYVSGNIFIVDS  267 (280)
Q Consensus       253 ~~~~~i~G~~i~vdg  267 (280)
                      ...  ..|+.+.+.|
T Consensus       204 ~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          204 DPR--ALNRVVIYRP  216 (318)
T ss_dssp             CGG--GTTEEEECCC
T ss_pred             Ccc--ccCeEEEecC
Confidence            532  2366777764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.33  E-value=2.8e-13  Score=115.29  Aligned_cols=85  Identities=16%  Similarity=0.291  Sum_probs=69.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++|+++||||+||||+++++.|++.|++|++++|+.++++++.+++....    .+.++.+|++ +.++++++++  
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~----~~~~~~~D~~-~~~~~~~~~~--  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETA-DDASRAEAVK--  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECC-SHHHHHHHTT--
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEecCC-CHHHHHHHHH--
Confidence            35889999999999999999999999999999999999988888887775432    3455778998 6666655544  


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                           .+|++|||+|..
T Consensus       188 -----~~DvlVn~ag~g  199 (287)
T 1lu9_A          188 -----GAHFVFTAGAIG  199 (287)
T ss_dssp             -----TCSEEEECCCTT
T ss_pred             -----hCCEEEECCCcc
Confidence                 589999999853

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.31  E-value=1.1e-10  Score=99.61  Aligned_cols=207  Identities=14%  Similarity=0.104  Sum_probs=122.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +||||||+|.||++++++|.++|++|+.+.|++...               .+   ..|     +    +   ..+....
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~~---~~~-----~----~---~~~~l~~   51 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------RI---TWD-----E----L---AASGLPS   51 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------EE---EHH-----H----H---HHHCCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------ee---ecc-----h----h---hHhhccC
Confidence            599999999999999999999999999999975320               11   111     0    0   0123458


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------CC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------LP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------~~  171 (280)
                      +|.+||.|+.. ........+.+.....++.|+.++-.+.+++..   ...+..++|+.||...+....         ..
T Consensus        52 ~d~vihla~~~-i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~---~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~  127 (298)
T 4b4o_A           52 CDAAVNLAGEN-ILNPLRRWNETFQKEVLGSRLETTQLLAKAITK---APQPPKAWVLVTGVAYYQPSLTAEYDEDSPGG  127 (298)
T ss_dssp             CSEEEECCCCC-SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH---CSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCS
T ss_pred             CCEEEEeccCc-ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH---hCCCceEEEEEeeeeeecCCCCCcccccCCcc
Confidence            99999999853 223333456777788899999998877776522   112234577777765543211         11


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhh-hhcCCCC------CCCCCChHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNV-ASRTYPL------RDFGTTDPALT  244 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~-~~~~~p~------~~~~~~~~~va  244 (280)
                      ....|+..|...+.     +......++++..+.||.+..+....+.  ...... .....+.      ..+...+ |++
T Consensus       128 ~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~g~g~~~~~~ihv~-Dva  199 (298)
T 4b4o_A          128 DFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAMG--HMLLPFRLGLGGPIGSGHQFFPWIHIG-DLA  199 (298)
T ss_dssp             CSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHHH--HHHHHHHTTCCCCBTTSCSBCCEEEHH-HHH
T ss_pred             ccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCchh--HHHHHHhcCCcceecccCceeecCcHH-HHH
Confidence            12233333333322     2234567899999999998776422111  111100 1111111      1223355 899


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.+++...  ...| .+++-++..++
T Consensus       200 ~a~~~~~~~~--~~~g-~yn~~~~~~~t  224 (298)
T 4b4o_A          200 GILTHALEAN--HVHG-VLNGVAPSSAT  224 (298)
T ss_dssp             HHHHHHHHCT--TCCE-EEEESCSCCCB
T ss_pred             HHHHHHHhCC--CCCC-eEEEECCCccC
Confidence            9988887543  2345 77776665543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.16  E-value=5.4e-11  Score=103.01  Aligned_cols=152  Identities=13%  Similarity=0.085  Sum_probs=99.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-------eEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .+++||||+|+||++++..|+++|.       .|+++++..  +.++.....+...   ...+  . .|+. +..+..+.
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~---~~~~--~-~di~-~~~~~~~a   77 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC---AFPL--L-AGLE-ATDDPKVA   77 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT---TCTT--E-EEEE-EESCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc---cccc--c-CCeE-eccChHHH
Confidence            4799999999999999999999996       799999874  2333333334321   1111  1 3444 22222333


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc-----
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT-----  165 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~-----  165 (280)
                      +       .+.|++||.||....  +  ..+.   .+.++.|+.++..+++++..+   .+...+++++|+....     
T Consensus        78 ~-------~~~D~Vih~Ag~~~~--~--~~~~---~~~~~~Nv~~t~~l~~a~~~~---~~~~~~vvv~snp~~~~~~~~  140 (327)
T 1y7t_A           78 F-------KDADYALLVGAAPRK--A--GMER---RDLLQVNGKIFTEQGRALAEV---AKKDVKVLVVGNPANTNALIA  140 (327)
T ss_dssp             T-------TTCSEEEECCCCCCC--T--TCCH---HHHHHHHHHHHHHHHHHHHHH---SCTTCEEEECSSSHHHHHHHH
T ss_pred             h-------CCCCEEEECCCcCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhh---cCCCeEEEEeCCchhhhHHHH
Confidence            2       378999999997532  1  2333   457899999999888877432   1124588888874410     


Q ss_pred             -cCC-CCCCCCCChhhHHHHHHHHHHHHHHhC
Q 023555          166 -SRG-QLPGGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       166 -~~~-~~~~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                       ... +.+....|+.+|...+.+.+.++..+.
T Consensus       141 ~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          141 YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence             111 233445699999999999999998764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.08  E-value=1.2e-10  Score=94.53  Aligned_cols=80  Identities=16%  Similarity=0.195  Sum_probs=61.8

Q ss_pred             cCCCCCcEEEEecC----------------CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEE
Q 023555           14 WCQLDNKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE   77 (280)
Q Consensus        14 ~~~l~~k~vlItG~----------------~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (280)
                      ..+|+||++|||||                +||||+++|++|+++|++|++++++.. ++         .+.+  +  ..
T Consensus         3 ~~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~g--~--~~   68 (226)
T 1u7z_A            3 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPPF--V--KR   68 (226)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCTT--E--EE
T ss_pred             ccCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCCC--C--eE
Confidence            34689999999999                689999999999999999999988642 11         0111  2  24


Q ss_pred             eccCCCHHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           78 LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        78 ~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                      +|++ +   .+++++.+.+.++++|++|||||+.
T Consensus        69 ~dv~-~---~~~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           69 VDVM-T---ALEMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             EECC-S---HHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             EccC-c---HHHHHHHHHHhcCCCCEEEECCccc
Confidence            5666 3   4556777788889999999999975

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.84  E-value=2.8e-09  Score=86.72  Aligned_cols=78  Identities=15%  Similarity=0.216  Sum_probs=58.3

Q ss_pred             CCcEEEEecC----------------CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccC
Q 023555           18 DNKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS   81 (280)
Q Consensus        18 ~~k~vlItG~----------------~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   81 (280)
                      +||++|||||                +|++|+++|++|+++|++|++++|.... ..       ..+  ..+..  .|+ 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~~--~~~~~--~~v-   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EPH--PNLSI--REI-   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CCC--TTEEE--EEC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cCC--CCeEE--EEH-
Confidence            5899999999                7889999999999999999999997431 10       001  12322  233 


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           82 ANGAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        82 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                         ++.+++++.+.+.++++|++|+||++.
T Consensus        69 ---~s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           69 ---TNTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             ---CSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             ---hHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence               345677777888888999999999975

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.80  E-value=2.4e-08  Score=72.57  Aligned_cols=75  Identities=19%  Similarity=0.301  Sum_probs=59.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|++++++...    .     ..+....+|++ +.+.+.+++     
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~-----~~~~~~~~d~~-~~~~~~~~~-----   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R-----MGVATKQVDAK-DEAGLAKAL-----   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T-----TTCEEEECCTT-CHHHHHHHT-----
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h-----CCCcEEEecCC-CHHHHHHHH-----
Confidence            4678999999 999999999999999 89999999988776553    1     13556788998 555555544     


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                        .++|++|++++.
T Consensus        68 --~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 --GGFDAVISAAPF   79 (118)
T ss_dssp             --TTCSEEEECSCG
T ss_pred             --cCCCEEEECCCc
Confidence              379999999853

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.63  E-value=2.5e-07  Score=82.18  Aligned_cols=82  Identities=16%  Similarity=0.201  Sum_probs=68.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhC---CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G---~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++++|+|+ |+||+++++.|+++|   ..|++++|+.++++++.+++....+  .++..+.+|++ +.++++++++..  
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~--~~~~~~~~D~~-d~~~l~~~l~~~--   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY--GEIDITTVDAD-SIEELVALINEV--   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC--CCCEEEECCTT-CHHHHHHHHHHH--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC--CceEEEEecCC-CHHHHHHHHHhh--
Confidence            57899999 899999999999998   4899999999999998888765322  25677899998 678888888765  


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                         ++|+|||+++.
T Consensus        76 ---~~DvVin~ag~   86 (405)
T 4ina_A           76 ---KPQIVLNIALP   86 (405)
T ss_dssp             ---CCSEEEECSCG
T ss_pred             ---CCCEEEECCCc
Confidence               79999999975

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.59  E-value=4.5e-08  Score=75.40  Aligned_cols=77  Identities=14%  Similarity=0.064  Sum_probs=60.7

Q ss_pred             hhHHHHHHHHHHhCCeEEEEecChhHHH---HHHHHHHhhcCCCcceEEEEeccCCCH--HHHHHHHHHHHHHcCCccEE
Q 023555           30 GLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKQSGSSVRAMAVELDVSANG--AAIENSVQKAWEAFGRIDAL  104 (280)
Q Consensus        30 giG~a~a~~l~~~G~~v~l~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~~g~id~l  104 (280)
                      -++.++++.|++.|++|++..|++....   +..+.+.+.   +.+...+.+|++ +.  ++++++++.+.+.+|+ |+|
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~---G~~~~~i~~Dv~-~~~~~~v~~~~~~i~~~~G~-dVL  101 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA---GMDYVYIPVDWQ-NPKVEDVEAFFAAMDQHKGK-DVL  101 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT---TCEEEECCCCTT-SCCHHHHHHHHHHHHHTTTS-CEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc---CCeEEEecCCCC-CCCHHHHHHHHHHHHhcCCC-CEE
Confidence            4779999999999999999988754332   123333332   347888899998 67  8999999999998999 999


Q ss_pred             EECCCCC
Q 023555          105 VNNAGVS  111 (280)
Q Consensus       105 i~~ag~~  111 (280)
                      |||+|..
T Consensus       102 VnnAgg~  108 (157)
T 3gxh_A          102 VHCLANY  108 (157)
T ss_dssp             EECSBSH
T ss_pred             EECCCCC
Confidence            9999863

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.56  E-value=8.1e-09  Score=94.82  Aligned_cols=100  Identities=20%  Similarity=0.304  Sum_probs=66.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++|||| ||+|+++++.|++.|++|++++|+.++++++.+++.    .  ++.    ++. +   ++++     
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~----~--~~~----~~~-d---l~~~-----  420 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG----G--KAL----SLT-D---LDNY-----  420 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT----C---CE----ETT-T---TTTC-----
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----C--cee----eHH-H---hhhc-----
Confidence            578999999999 599999999999999999999999988887766552    1  111    222 1   1000     


Q ss_pred             HHcCCccEEEECCCCCCCC----CCCCCCCHHHHHHHHHhhhhHH
Q 023555           96 EAFGRIDALVNNAGVSGAV----KSPLDLTEEEWNHIMKTNLTGS  136 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~  136 (280)
                       ..+.+|++|||+|.....    .++.+.+.+++...+++|+.+.
T Consensus       421 -~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          421 -HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             ---CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             -cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence             113589999999874221    2444556677778889998765

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.55  E-value=1.3e-07  Score=85.01  Aligned_cols=79  Identities=23%  Similarity=0.359  Sum_probs=60.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++|+++|+| +|++|+++++.|++.|++|++++|+.++++++.+.+    +   .+..+.+|++ +.+++.++++    
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~---~~~~~~~Dv~-d~~~l~~~l~----   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q---HSTPISLDVN-DDAALDAEVA----   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----T---TEEEEECCTT-CHHHHHHHHT----
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----C---CceEEEeecC-CHHHHHHHHc----
Confidence            4578999997 799999999999999999999999987766543322    1   3567788998 5566655543    


Q ss_pred             HcCCccEEEECCCCC
Q 023555           97 AFGRIDALVNNAGVS  111 (280)
Q Consensus        97 ~~g~id~li~~ag~~  111 (280)
                         ++|+|||+++..
T Consensus        68 ---~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 ---KHDLVISLIPYT   79 (450)
T ss_dssp             ---TSSEEEECCC--
T ss_pred             ---CCcEEEECCccc
Confidence               799999999863

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.54  E-value=2.8e-11  Score=108.53  Aligned_cols=45  Identities=20%  Similarity=0.265  Sum_probs=40.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      ++.||+++|||++ +||+++|+.|+..|++|+++++++..+++...
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            5899999999987 99999999999999999999999877665543

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.53  E-value=1.6e-07  Score=79.57  Aligned_cols=80  Identities=24%  Similarity=0.418  Sum_probs=60.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++....+...   .+.+|++ +.          .
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~---~~~~d~~-~~----------~  188 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF---GEEVKFS-GL----------D  188 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH---HHHEEEE-CT----------T
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc---ceeEEEe-eH----------H
Confidence            6889999999997 99999999999999 999999999988888877754221000   1123444 21          2


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                      +.++++|++|||+|..
T Consensus       189 ~~~~~~DilVn~ag~~  204 (287)
T 1nvt_A          189 VDLDGVDIIINATPIG  204 (287)
T ss_dssp             CCCTTCCEEEECSCTT
T ss_pred             HhhCCCCEEEECCCCC
Confidence            3457899999999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.52  E-value=1.7e-07  Score=74.78  Aligned_cols=80  Identities=16%  Similarity=0.150  Sum_probs=55.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|++++|+||++|||+++++.+...|++|+++++++++.+.+. +    .+.  ..   .+|.+ +.+..+.+.+.. .
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~----~g~--~~---~~d~~-~~~~~~~~~~~~-~  104 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-R----LGV--EY---VGDSR-SVDFADEILELT-D  104 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-T----TCC--SE---EEETT-CSTHHHHHHHHT-T
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H----cCC--CE---EeeCC-cHHHHHHHHHHh-C
Confidence            35899999999999999999999999999999999987665432 1    121  11   24665 323333332221 1


Q ss_pred             HcCCccEEEECCC
Q 023555           97 AFGRIDALVNNAG  109 (280)
Q Consensus        97 ~~g~id~li~~ag  109 (280)
                       .+++|++|+|+|
T Consensus       105 -~~~~D~vi~~~g  116 (198)
T 1pqw_A          105 -GYGVDVVLNSLA  116 (198)
T ss_dssp             -TCCEEEEEECCC
T ss_pred             -CCCCeEEEECCc
Confidence             136999999986

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.51  E-value=1.5e-07  Score=82.59  Aligned_cols=107  Identities=22%  Similarity=0.272  Sum_probs=71.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+    +.  .   +.+|.+ +.+++++++.   
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g~--~---~~~~~~-~~~~l~~~~~---  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----GG--R---VITLTA-TEANIKKSVQ---  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TT--S---EEEEEC-CHHHHHHHHH---
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----Cc--e---EEEecC-CHHHHHHHHh---
Confidence            578999999999 99999999999999999999999988776654332    21  2   345665 4455555543   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                          ..|++|++++......                    +..+.+..++.|++   ++.||++++..
T Consensus       229 ----~~DvVi~~~g~~~~~~--------------------~~li~~~~l~~mk~---gg~iV~v~~~~  269 (369)
T 2eez_A          229 ----HADLLIGAVLVPGAKA--------------------PKLVTRDMLSLMKE---GAVIVDVAVDQ  269 (369)
T ss_dssp             ----HCSEEEECCC---------------------------CCSCHHHHTTSCT---TCEEEECC---
T ss_pred             ----CCCEEEECCCCCcccc--------------------chhHHHHHHHhhcC---CCEEEEEecCC
Confidence                6899999998642111                    12223455566632   68999998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.51  E-value=2.1e-07  Score=80.45  Aligned_cols=80  Identities=23%  Similarity=0.375  Sum_probs=58.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||||++||||+++++.+...|++|+++++++++++.+ +++    +.  .   ..+|.+ +.+++.+.+.++..
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~----g~--~---~~~d~~-~~~~~~~~~~~~~~  212 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI----GF--D---AAFNYK-TVNSLEEALKKASP  212 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC--S---EEEETT-SCSCHHHHHHHHCT
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc----CC--c---EEEecC-CHHHHHHHHHHHhC
Confidence            3589999999999999999999999999999999998877655 333    11  1   234665 32334444444332


Q ss_pred             HcCCccEEEECCC
Q 023555           97 AFGRIDALVNNAG  109 (280)
Q Consensus        97 ~~g~id~li~~ag  109 (280)
                        +++|++|+|+|
T Consensus       213 --~~~d~vi~~~g  223 (333)
T 1v3u_A          213 --DGYDCYFDNVG  223 (333)
T ss_dssp             --TCEEEEEESSC
T ss_pred             --CCCeEEEECCC
Confidence              57999999998

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.49  E-value=1.5e-06  Score=74.31  Aligned_cols=83  Identities=19%  Similarity=0.366  Sum_probs=62.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC---hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR---VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++++|++||+|+ ||+|++++..|++.|+ +|+++.|+   .++++++.+++....+  ..+.  ..++. +.+++.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~--~~~~--~~~~~-~~~~l~~~  223 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD--CKAQ--LFDIE-DHEQLRKE  223 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS--CEEE--EEETT-CHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC--CceE--Eeccc-hHHHHHhh
Confidence            3689999999998 7999999999999999 89999999   8888888888876543  2232  33444 33333333


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~  110 (280)
                      +.       ..|+|||+...
T Consensus       224 l~-------~aDiIINaTp~  236 (315)
T 3tnl_A          224 IA-------ESVIFTNATGV  236 (315)
T ss_dssp             HH-------TCSEEEECSST
T ss_pred             hc-------CCCEEEECccC
Confidence            33       68999999854

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.36  E-value=2e-06  Score=64.61  Aligned_cols=76  Identities=18%  Similarity=0.245  Sum_probs=56.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++.++++|+|+ |.+|+++++.|.++|++|++++++++..+.+.+.         ...++.+|.+ +.+.++++      
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~---------~~~~~~gd~~-~~~~l~~~------   66 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE---------GFDAVIADPT-DESFYRSL------   66 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---------TCEEEECCTT-CHHHHHHS------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC---------CCcEEECCCC-CHHHHHhC------
Confidence            44678999998 7899999999999999999999998877655431         2456788998 54444332      


Q ss_pred             HcCCccEEEECCC
Q 023555           97 AFGRIDALVNNAG  109 (280)
Q Consensus        97 ~~g~id~li~~ag  109 (280)
                      ...+.|++|.+.+
T Consensus        67 ~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 DLEGVSAVLITGS   79 (141)
T ss_dssp             CCTTCSEEEECCS
T ss_pred             CcccCCEEEEecC
Confidence            2247899998775

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.36  E-value=1.3e-06  Score=78.73  Aligned_cols=79  Identities=19%  Similarity=0.274  Sum_probs=60.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+ |++|+++++.|++. |++|++++|+.++++++.+.    .    .+..+.+|+. +.+++.++++  
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~----~~~~~~~D~~-d~~~l~~~l~--   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S----GSKAISLDVT-DDSALDKVLA--   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G----TCEEEECCTT-CHHHHHHHHH--
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c----CCcEEEEecC-CHHHHHHHHc--
Confidence            678899999997 99999999999998 78999999998887765433    1    2445678887 5555555543  


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                           ++|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 789999999753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.35  E-value=5.4e-07  Score=67.61  Aligned_cols=79  Identities=14%  Similarity=0.255  Sum_probs=54.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .++++++++|+|+ |++|+.+++.|.+.|++|++++++++..+.+.    +   .  ....+..|.+ +.+.++++    
T Consensus         2 ~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~---~--~~~~~~~d~~-~~~~l~~~----   66 (144)
T 2hmt_A            2 GRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S---Y--ATHAVIANAT-EENELLSL----   66 (144)
T ss_dssp             ----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T---T--CSEEEECCTT-CHHHHHTT----
T ss_pred             CCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H---h--CCEEEEeCCC-CHHHHHhc----
Confidence            3567788999998 99999999999999999999999876654321    1   1  1234677877 44333222    


Q ss_pred             HHHcCCccEEEECCCC
Q 023555           95 WEAFGRIDALVNNAGV  110 (280)
Q Consensus        95 ~~~~g~id~li~~ag~  110 (280)
                        ..++.|++|++++.
T Consensus        67 --~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 --GIRNFEYVIVAIGA   80 (144)
T ss_dssp             --TGGGCSEEEECCCS
T ss_pred             --CCCCCCEEEECCCC
Confidence              13478999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.34  E-value=1.9e-06  Score=74.34  Aligned_cols=153  Identities=14%  Similarity=0.107  Sum_probs=96.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC-------eEEEEecC----hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARR----VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAI   87 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   87 (280)
                      ..+|+||||+|.+|.+++..|+..|.       .|++++++    +++++....++.... .  ...   .|+. ...+.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~-~--~~~---~~i~-~~~~~   77 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA-F--PLL---AGMT-AHADP   77 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT-C--TTE---EEEE-EESSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc-c--ccc---CcEE-EecCc
Confidence            45899999999999999999999886       79999998    655655555565421 0  111   1222 11112


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEecccc--
Q 023555           88 ENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAA--  164 (280)
Q Consensus        88 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~--  164 (280)
                      .+.       +...|++|+.||....    ...+.+   +.+..|+.....+++.+    .+.. ..+++|++|.-..  
T Consensus        78 ~~a-------l~~aD~Vi~~ag~~~~----~g~~r~---dl~~~N~~i~~~i~~~i----~~~~~p~a~ii~~SNPv~~~  139 (329)
T 1b8p_A           78 MTA-------FKDADVALLVGARPRG----PGMERK---DLLEANAQIFTVQGKAI----DAVASRNIKVLVVGNPANTN  139 (329)
T ss_dssp             HHH-------TTTCSEEEECCCCCCC----TTCCHH---HHHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSSHHHH
T ss_pred             HHH-------hCCCCEEEEeCCCCCC----CCCCHH---HHHHHHHHHHHHHHHHH----HHhcCCCeEEEEccCchHHH
Confidence            222       3478999999997522    123443   35678888777666665    3332 4679999987331  


Q ss_pred             -----ccCCCCCCCCCChhhHHHHHHHHHHHHHHhCC
Q 023555          165 -----TSRGQLPGGVAYASSKAGLNAMTKCLSLELGV  196 (280)
Q Consensus       165 -----~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~  196 (280)
                           .....+|..-.|+.++.-...+...++..+.-
T Consensus       140 t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          140 AYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             HHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence                 11112333345888876667778888887753

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.30  E-value=2.2e-06  Score=71.93  Aligned_cols=76  Identities=20%  Similarity=0.326  Sum_probs=57.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++... +   .+.  ..|+.    .+       .
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-~---~~~--~~~~~----~~-------~  177 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-G---SIQ--ALSMD----EL-------E  177 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-S---SEE--ECCSG----GG-------T
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-C---Cee--EecHH----Hh-------c
Confidence            578999999998 79999999999999999999999999888887766431 1   121  12221    11       1


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                      +  +..|++||+++..
T Consensus       178 ~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          178 G--HEFDLIINATSSG  191 (271)
T ss_dssp             T--CCCSEEEECCSCG
T ss_pred             c--CCCCEEEECCCCC
Confidence            1  5899999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.27  E-value=1.9e-06  Score=74.89  Aligned_cols=81  Identities=21%  Similarity=0.282  Sum_probs=58.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+|++|+||+++++.+...|++|++++|++++++.+ +++    +.  .   ..+|.+ +.+++.+.+.++..
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~----g~--~---~~~d~~-~~~~~~~~~~~~~~  236 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI----GG--E---VFIDFT-KEKDIVGAVLKATD  236 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT----TC--C---EEEETT-TCSCHHHHHHHHHT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc----CC--c---eEEecC-ccHhHHHHHHHHhC
Confidence            3589999999999999999999999999999999988776543 222    21  1   123665 22445555555433


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      .  ++|++|+++|.
T Consensus       237 ~--~~D~vi~~~g~  248 (347)
T 2hcy_A          237 G--GAHGVINVSVS  248 (347)
T ss_dssp             S--CEEEEEECSSC
T ss_pred             C--CCCEEEECCCc
Confidence            2  79999999974

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.25  E-value=1.9e-06  Score=74.27  Aligned_cols=79  Identities=11%  Similarity=0.216  Sum_probs=56.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+||+|+||+++++.+...|++|+++++++++++.+.+ +    +.  .   ..+|.+ +.+..+++.+...  
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~----g~--~---~~~~~~-~~~~~~~~~~~~~--  206 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A----GA--W---QVINYR-EEDLVERLKEITG--  206 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H----TC--S---EEEETT-TSCHHHHHHHHTT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CC--C---EEEECC-CccHHHHHHHHhC--
Confidence            58999999999999999999999999999999999877665533 2    11  1   123555 3233333332211  


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      ..++|++|+|+|
T Consensus       207 ~~~~D~vi~~~g  218 (327)
T 1qor_A          207 GKKVRVVYDSVG  218 (327)
T ss_dssp             TCCEEEEEECSC
T ss_pred             CCCceEEEECCc
Confidence            136999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.24  E-value=5e-06  Score=70.10  Aligned_cols=80  Identities=25%  Similarity=0.403  Sum_probs=60.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....+ ...+.  ..+.. +   +.+.+.  
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~-~~~i~--~~~~~-~---l~~~l~--  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG-REAVV--GVDAR-G---IEDVIA--  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT-SCCEE--EECST-T---HHHHHH--
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEE--EcCHH-H---HHHHHh--
Confidence            689999999998 7999999999999999 699999999999999888876432 11222  23322 2   233333  


Q ss_pred             HHHcCCccEEEECCCC
Q 023555           95 WEAFGRIDALVNNAGV  110 (280)
Q Consensus        95 ~~~~g~id~li~~ag~  110 (280)
                           ..|+|||+...
T Consensus       194 -----~~DiVInaTp~  204 (283)
T 3jyo_A          194 -----AADGVVNATPM  204 (283)
T ss_dssp             -----HSSEEEECSST
T ss_pred             -----cCCEEEECCCC
Confidence                 47999999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.23  E-value=2.5e-06  Score=73.66  Aligned_cols=80  Identities=13%  Similarity=0.216  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .++++||+||+|+||+++++.+...|++|+++++++++++.+. ++    +.  .   ..+|.+ +.+..+.+.+.. . 
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~----g~--~---~~~d~~-~~~~~~~i~~~~-~-  211 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL----GC--H---HTINYS-TQDFAEVVREIT-G-  211 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH----TC--S---EEEETT-TSCHHHHHHHHH-T-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC--C---EEEECC-CHHHHHHHHHHh-C-
Confidence            5899999999999999999999999999999999987776553 23    11  1   123555 323333332222 1 


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      ..++|++|+|+|.
T Consensus       212 ~~~~d~vi~~~g~  224 (333)
T 1wly_A          212 GKGVDVVYDSIGK  224 (333)
T ss_dssp             TCCEEEEEECSCT
T ss_pred             CCCCeEEEECCcH
Confidence            1369999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.20  E-value=1.4e-05  Score=68.19  Aligned_cols=83  Identities=18%  Similarity=0.304  Sum_probs=60.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC---hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR---VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .++++|++||+|+ ||.|++++..|++.|+ +|.++.|+   .++++++.+++....+  ..+.  ..++. +.+...+.
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~--~~v~--~~~~~-~l~~~~~~  217 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD--CVVT--VTDLA-DQHAFTEA  217 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS--CEEE--EEETT-CHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC--cceE--EechH-hhhhhHhh
Confidence            3688999999997 8999999999999999 79999999   8888888888876433  1222  23443 32222222


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~  110 (280)
                      +.       ..|+|||+.+.
T Consensus       218 l~-------~~DiIINaTp~  230 (312)
T 3t4e_A          218 LA-------SADILTNGTKV  230 (312)
T ss_dssp             HH-------HCSEEEECSST
T ss_pred             cc-------CceEEEECCcC
Confidence            22       57999999865

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.20  E-value=1.9e-06  Score=74.80  Aligned_cols=80  Identities=19%  Similarity=0.361  Sum_probs=57.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+|++|+||+.+++.+...|++|+++++++++++.+.+++    +.  ..   .+|.+ +.+++.+.+.++.. 
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~----g~--~~---~~d~~-~~~~~~~~~~~~~~-  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF----GF--DD---AFNYK-EESDLTAALKRCFP-  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS----CC--SE---EEETT-SCSCSHHHHHHHCT-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC--ce---EEecC-CHHHHHHHHHHHhC-
Confidence            5899999999999999999999999999999999988776553222    21  11   23554 22233344443322 


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                       +++|++|+++|
T Consensus       224 -~~~d~vi~~~g  234 (345)
T 2j3h_A          224 -NGIDIYFENVG  234 (345)
T ss_dssp             -TCEEEEEESSC
T ss_pred             -CCCcEEEECCC
Confidence             47999999987

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.19  E-value=3.4e-06  Score=72.90  Aligned_cols=81  Identities=22%  Similarity=0.383  Sum_probs=57.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+|++|+||.++++.+...|++|+++++++++++.+.+++    +.  .   ...|.+ +.+ ..+.+.+.. 
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~----g~--~---~~~~~~-~~~-~~~~~~~~~-  215 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL----GF--D---GAIDYK-NED-LAAGLKREC-  215 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----CC--S---EEEETT-TSC-HHHHHHHHC-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC--C---EEEECC-CHH-HHHHHHHhc-
Confidence            35899999999999999999999999999999999988877654433    11  1   123444 222 222222222 


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                       .+++|++|+|+|.
T Consensus       216 -~~~~d~vi~~~g~  228 (336)
T 4b7c_A          216 -PKGIDVFFDNVGG  228 (336)
T ss_dssp             -TTCEEEEEESSCH
T ss_pred             -CCCceEEEECCCc
Confidence             2479999999973

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.18  E-value=4.1e-06  Score=72.99  Aligned_cols=80  Identities=14%  Similarity=0.207  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+||+|+||.++++.+...|++|+++++++++++.+ +++    +.  .   ..+|.+ +.+..+.+.+.. . 
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----g~--~---~~~~~~-~~~~~~~~~~~~-~-  228 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL----GA--A---AGFNYK-KEDFSEATLKFT-K-  228 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH----TC--S---EEEETT-TSCHHHHHHHHT-T-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CC--c---EEEecC-ChHHHHHHHHHh-c-
Confidence            589999999999999999999999999999999998877665 333    11  1   124554 222222222211 1 


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .+++|++|+|+|.
T Consensus       229 ~~~~d~vi~~~G~  241 (354)
T 2j8z_A          229 GAGVNLILDCIGG  241 (354)
T ss_dssp             TSCEEEEEESSCG
T ss_pred             CCCceEEEECCCc
Confidence            1369999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.16  E-value=3e-06  Score=73.92  Aligned_cols=79  Identities=19%  Similarity=0.333  Sum_probs=55.8

Q ss_pred             CC--cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           18 DN--KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        18 ~~--k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .|  +++||+|++|+||+++++.+...|+ +|+++++++++++.+.+++    +.  .   ..+|.+ + ++..+.+.+.
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~----g~--~---~~~d~~-~-~~~~~~~~~~  226 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL----GF--D---AAINYK-K-DNVAEQLRES  226 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS----CC--S---EEEETT-T-SCHHHHHHHH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----CC--c---eEEecC-c-hHHHHHHHHh
Confidence            47  9999999999999999999999999 9999999987776554322    21  1   124555 2 2222233322


Q ss_pred             HHHcCCccEEEECCC
Q 023555           95 WEAFGRIDALVNNAG  109 (280)
Q Consensus        95 ~~~~g~id~li~~ag  109 (280)
                      ..  +++|++|+|+|
T Consensus       227 ~~--~~~d~vi~~~G  239 (357)
T 2zb4_A          227 CP--AGVDVYFDNVG  239 (357)
T ss_dssp             CT--TCEEEEEESCC
T ss_pred             cC--CCCCEEEECCC
Confidence            21  26999999997

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.13  E-value=5.5e-06  Score=72.09  Aligned_cols=79  Identities=20%  Similarity=0.237  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+|++|+||.++++.+...|++|+++++++++++.+ +++    +.  .   ..+|.. +.+..+++.+.. . 
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga--~---~~~d~~-~~~~~~~~~~~~-~-  236 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN----GA--H---EVFNHR-EVNYIDKIKKYV-G-  236 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC--S---EEEETT-STTHHHHHHHHH-C-
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc----CC--C---EEEeCC-CchHHHHHHHHc-C-
Confidence            589999999999999999999999999999999998877633 222    21  1   124555 323233322221 1 


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      .+++|++|+|+|
T Consensus       237 ~~~~D~vi~~~G  248 (351)
T 1yb5_A          237 EKGIDIIIEMLA  248 (351)
T ss_dssp             TTCEEEEEESCH
T ss_pred             CCCcEEEEECCC
Confidence            137999999997

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.11  E-value=6e-06  Score=72.26  Aligned_cols=76  Identities=21%  Similarity=0.327  Sum_probs=53.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh---hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +++|+++||+|+ |++|..+++.+...|++|+++++++   ++++.+ +++    +    ...+  | . + +..+.+.+
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~----g----a~~v--~-~-~-~~~~~~~~  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET----K----TNYY--N-S-S-NGYDKLKD  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH----T----CEEE--E-C-T-TCSHHHHH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh----C----Ccee--c-h-H-HHHHHHHH
Confidence            456999999999 9999999999999999999999987   666433 333    1    2222  4 3 2 11222222


Q ss_pred             HHHHHcCCccEEEECCCC
Q 023555           93 KAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~  110 (280)
                        ..  +++|++|+++|.
T Consensus       243 --~~--~~~d~vid~~g~  256 (366)
T 2cdc_A          243 --SV--GKFDVIIDATGA  256 (366)
T ss_dssp             --HH--CCEEEEEECCCC
T ss_pred             --hC--CCCCEEEECCCC
Confidence              12  589999999985

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.04  E-value=1.2e-05  Score=69.68  Aligned_cols=81  Identities=19%  Similarity=0.297  Sum_probs=55.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.++++||+|++++||+.+++.+... |++|+++++++++++.+ +++    +.  ..   ..|.+ +.+..+ .+.++.
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~----g~--~~---~~~~~-~~~~~~-~~~~~~  236 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA----GA--DY---VINAS-MQDPLA-EIRRIT  236 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH----TC--SE---EEETT-TSCHHH-HHHHHT
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----CC--CE---EecCC-CccHHH-HHHHHh
Confidence            36899999999999999999999999 99999999998877654 333    11  11   23444 222222 222221


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      .. +++|++|+++|.
T Consensus       237 ~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          237 ES-KGVDAVIDLNNS  250 (347)
T ss_dssp             TT-SCEEEEEESCCC
T ss_pred             cC-CCceEEEECCCC
Confidence            11 589999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.02  E-value=1.8e-05  Score=68.85  Aligned_cols=79  Identities=14%  Similarity=0.271  Sum_probs=56.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+||+|+||.++++.+...|++|+++++++++++.+.+ +    +.  ..   ..|.. +.+ ..+.+.+..  
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga--~~---~~~~~-~~~-~~~~~~~~~--  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L----GA--KR---GINYR-SED-FAAVIKAET--  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H----TC--SE---EEETT-TSC-HHHHHHHHH--
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CC--CE---EEeCC-chH-HHHHHHHHh--
Confidence            58999999999999999999999999999999999988765432 3    11  11   23443 222 233333332  


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .+++|++|+++|.
T Consensus       233 ~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 GQGVDIILDMIGA  245 (353)
T ss_dssp             SSCEEEEEESCCG
T ss_pred             CCCceEEEECCCH
Confidence            4579999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.02  E-value=1.4e-05  Score=67.05  Aligned_cols=76  Identities=25%  Similarity=0.344  Sum_probs=57.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++... +   .+..  .|+. +   +.       
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~-~---~~~~--~~~~-~---~~-------  177 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-G---NIQA--VSMD-S---IP-------  177 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-S---CEEE--EEGG-G---CC-------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc-C---CeEE--eeHH-H---hc-------
Confidence            578999999998 79999999999999999999999999988888777431 1   1211  2221 1   10       


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                      +  +..|++||+++..
T Consensus       178 ~--~~~DivIn~t~~~  191 (272)
T 1p77_A          178 L--QTYDLVINATSAG  191 (272)
T ss_dssp             C--SCCSEEEECCCC-
T ss_pred             c--CCCCEEEECCCCC
Confidence            1  4799999999864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.98  E-value=5.1e-05  Score=57.67  Aligned_cols=79  Identities=18%  Similarity=0.247  Sum_probs=56.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      |.++.++|.|+ |.+|+.+++.|.+.|++|++++++ ++..+.+.+...    .  .+.++..|.+ +.+.++++     
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----~--~~~~i~gd~~-~~~~l~~a-----   67 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----D--NADVIPGDSN-DSSVLKKA-----   67 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----T--TCEEEESCTT-SHHHHHHH-----
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----C--CCeEEEcCCC-CHHHHHHc-----
Confidence            35677889986 999999999999999999999997 454444443321    1  3567889988 54443332     


Q ss_pred             HHcCCccEEEECCC
Q 023555           96 EAFGRIDALVNNAG  109 (280)
Q Consensus        96 ~~~g~id~li~~ag  109 (280)
                       ...+.|.+|...+
T Consensus        68 -~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 -GIDRCRAILALSD   80 (153)
T ss_dssp             -TTTTCSEEEECSS
T ss_pred             -ChhhCCEEEEecC
Confidence             1247899988875

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.97  E-value=0.00016  Score=62.18  Aligned_cols=151  Identities=13%  Similarity=0.134  Sum_probs=84.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ..+++||||+|.+|.+++..|+++|  ..|++++++++  +....++..... ..++..    +. ...+.++++     
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~-~~~v~~----~~-~t~d~~~al-----   74 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDT-GAVVRG----FL-GQQQLEAAL-----   74 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCS-SCEEEE----EE-SHHHHHHHH-----
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccc-cceEEE----Ee-CCCCHHHHc-----
Confidence            3579999999999999999999998  78999998765  223334433211 111211    11 122333333     


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc----------c
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT----------S  166 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~----------~  166 (280)
                        ...|++|+.+|.....    ..+.+   +.+..|+.....+++.+.    +....+.|+++|.-...          .
T Consensus        75 --~gaDvVi~~ag~~~~~----g~~r~---dl~~~N~~~~~~i~~~i~----~~~p~~~viv~SNPv~~~~~~~t~~~~~  141 (326)
T 1smk_A           75 --TGMDLIIVPAGVPRKP----GMTRD---DLFKINAGIVKTLCEGIA----KCCPRAIVNLISNPVNSTVPIAAEVFKK  141 (326)
T ss_dssp             --TTCSEEEECCCCCCCS----SCCCS---HHHHHHHHHHHHHHHHHH----HHCTTSEEEECCSSHHHHHHHHHHHHHH
T ss_pred             --CCCCEEEEcCCcCCCC----CCCHH---HHHHHHHHHHHHHHHHHH----hhCCCeEEEEECCchHHHHHHHHHHHHH
Confidence              3789999999975321    12222   347778888777766653    33334455554432222          0


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhC
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                      ...+|..-..+..-.-...+-..++..+.
T Consensus       142 ~~~~p~~rviG~~~Ld~~r~~~~la~~l~  170 (326)
T 1smk_A          142 AGTYDPKRLLGVTMLDVVRANTFVAEVLG  170 (326)
T ss_dssp             HTCCCTTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             ccCCCcccEEEEeehHHHHHHHHHHHHhC
Confidence            11234333444432224455556666653

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.97  E-value=0.00028  Score=59.98  Aligned_cols=149  Identities=15%  Similarity=0.095  Sum_probs=84.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEec--ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAAR--RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      +++||||+|.+|.+++..|+..|.  .++++++  ++++++....++.+.......+.... +   +.           +
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~---~~-----------~   66 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G---GY-----------E   66 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C---CG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C---CH-----------H
Confidence            689999999999999999998886  5888998  77666554455544321111111111 1   11           1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc------cCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT------SRGQL  170 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~------~~~~~  170 (280)
                      .+...|++|+.+|....  +  ..+.+   +.+..|+..+..+++.+    .+....+.++++|.-...      ...++
T Consensus        67 a~~~aDvVi~~ag~~~~--~--g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNPv~~~~~~~~~~~~~  135 (303)
T 1o6z_A           67 DTAGSDVVVITAGIPRQ--P--GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNPVDLLNRHLYEAGDR  135 (303)
T ss_dssp             GGTTCSEEEECCCCCCC--T--TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSSHHHHHHHHHHHSSS
T ss_pred             HhCCCCEEEEcCCCCCC--C--CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCChHHHHHHHHHHHcCC
Confidence            23479999999997422  1  23443   34778888776666655    444434455544332211      01123


Q ss_pred             CCCCCChh-hHHHHHHHHHHHHHHhC
Q 023555          171 PGGVAYAS-SKAGLNAMTKCLSLELG  195 (280)
Q Consensus       171 ~~~~~Y~~-sK~a~~~l~~~la~~~~  195 (280)
                      |..-.++. +-.=...+-..+|..+.
T Consensus       136 p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          136 SREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             CHHHeeecccchhHHHHHHHHHHHhC
Confidence            33334444 32223455566666664

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.95  E-value=2.5e-05  Score=67.61  Aligned_cols=79  Identities=20%  Similarity=0.257  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .++++||+|++|++|+.+++.+...|++|+.+++++++++.+. ++    +.  ..   .+|.+ +. ++.+.+.++.. 
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~----ga--~~---~~d~~-~~-~~~~~~~~~~~-  232 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL----GA--DE---TVNYT-HP-DWPKEVRRLTG-  232 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH----TC--SE---EEETT-ST-THHHHHHHHTT-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc----CC--CE---EEcCC-cc-cHHHHHHHHhC-
Confidence            5899999999999999999999999999999999988776653 23    11  11   24555 32 22222222211 


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      ..++|++|+++|
T Consensus       233 ~~~~d~vi~~~g  244 (343)
T 2eih_A          233 GKGADKVVDHTG  244 (343)
T ss_dssp             TTCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            237999999998

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.93  E-value=0.00031  Score=59.97  Aligned_cols=151  Identities=16%  Similarity=0.192  Sum_probs=90.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEec--ChhHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAAR--RVDRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r--~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++||||+|++|.+++..|+..|.  .+.++++  ++++++.....+....... ..+.....+   +  +..       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~---d--~l~-------   69 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES---D--ENL-------   69 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE---T--TCG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC---c--chH-------
Confidence            689999999999999999998885  5888998  6655554444443321110 111222211   0  011       


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc------cCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT------SRGQ  169 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~------~~~~  169 (280)
                      +.+.+.|++||.||....  +  ..+..   ..+..|+..+..+++++    .+.. .+.++++|.-...      ...+
T Consensus        70 ~al~gaD~Vi~~Ag~~~~--~--g~~r~---dl~~~N~~i~~~i~~~i----~~~~-~~~vlv~SNPv~~~t~~~~k~~~  137 (313)
T 1hye_A           70 RIIDESDVVIITSGVPRK--E--GMSRM---DLAKTNAKIVGKYAKKI----AEIC-DTKIFVITNPVDVMTYKALVDSK  137 (313)
T ss_dssp             GGGTTCSEEEECCSCCCC--T--TCCHH---HHHHHHHHHHHHHHHHH----HHHC-CCEEEECSSSHHHHHHHHHHHHC
T ss_pred             HHhCCCCEEEECCCCCCC--C--CCcHH---HHHHHHHHHHHHHHHHH----HHhC-CeEEEEecCcHHHHHHHHHHhhC
Confidence            123479999999997421  1  23333   45788888887777766    3334 4556655542211      1113


Q ss_pred             CCCCCCChh-hHHHHHHHHHHHHHHhC
Q 023555          170 LPGGVAYAS-SKAGLNAMTKCLSLELG  195 (280)
Q Consensus       170 ~~~~~~Y~~-sK~a~~~l~~~la~~~~  195 (280)
                      +|..-.++. +..-...+...+|..+.
T Consensus       138 ~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          138 FERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            455556676 66556677777777774

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.91  E-value=2.3e-05  Score=67.35  Aligned_cols=79  Identities=13%  Similarity=0.281  Sum_probs=55.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+||+|+||..+++.+...|++|+++++++++++.+. ++    +.  ..   ..|.+ +.+    ..+.+.+
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~----Ga--~~---~~~~~-~~~----~~~~~~~  203 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL----GA--WE---TIDYS-HED----VAKRVLE  203 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH----TC--SE---EEETT-TSC----HHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC--CE---EEeCC-Ccc----HHHHHHH
Confidence            35899999999999999999999999999999999988877543 33    11  11   23443 222    2222322


Q ss_pred             Hc--CCccEEEECCCC
Q 023555           97 AF--GRIDALVNNAGV  110 (280)
Q Consensus        97 ~~--g~id~li~~ag~  110 (280)
                      ..  .++|++|+++|.
T Consensus       204 ~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          204 LTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             HTTTCCEEEEEESSCG
T ss_pred             HhCCCCceEEEECCCh
Confidence            22  369999999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.90  E-value=5.7e-05  Score=56.03  Aligned_cols=75  Identities=20%  Similarity=0.308  Sum_probs=53.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++++|+|+ |.+|+.+++.|.+.|++|++++++++..+.+.+..        ....+..|.+ +.+.+.+      ...
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--------~~~~~~~d~~-~~~~l~~------~~~   67 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--------DALVINGDCT-KIKTLED------AGI   67 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------SSEEEESCTT-SHHHHHH------TTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--------CcEEEEcCCC-CHHHHHH------cCc
Confidence            457899987 99999999999999999999999987766543321        2334667776 4333221      113


Q ss_pred             CCccEEEECCC
Q 023555           99 GRIDALVNNAG  109 (280)
Q Consensus        99 g~id~li~~ag  109 (280)
                      .+.|++|.+++
T Consensus        68 ~~~d~vi~~~~   78 (140)
T 1lss_A           68 EDADMYIAVTG   78 (140)
T ss_dssp             TTCSEEEECCS
T ss_pred             ccCCEEEEeeC
Confidence            47899999974

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.87  E-value=2.4e-05  Score=67.49  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=55.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+||+|+||.++++.+...|++|+.+++++++++.+ +++    +.  ..   ..|.. +.+    ..+.+.+
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga--~~---~~~~~-~~~----~~~~~~~  211 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY----GA--EY---LINAS-KED----ILRQVLK  211 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC--SE---EEETT-TSC----HHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----CC--cE---EEeCC-Cch----HHHHHHH
Confidence            3589999999999999999999999999999999998877643 332    21  11   23433 212    2222222


Q ss_pred             Hc--CCccEEEECCCC
Q 023555           97 AF--GRIDALVNNAGV  110 (280)
Q Consensus        97 ~~--g~id~li~~ag~  110 (280)
                      ..  .++|++|+++|.
T Consensus       212 ~~~~~g~D~vid~~g~  227 (334)
T 3qwb_A          212 FTNGKGVDASFDSVGK  227 (334)
T ss_dssp             HTTTSCEEEEEECCGG
T ss_pred             HhCCCCceEEEECCCh
Confidence            22  369999999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.84  E-value=3.4e-05  Score=65.49  Aligned_cols=77  Identities=27%  Similarity=0.362  Sum_probs=56.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....    .      ++. +.++       +
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~----~------~~~-~~~~-------~  198 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR----S------AYF-SLAE-------A  198 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS----C------CEE-CHHH-------H
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc----C------cee-eHHH-------H
Confidence            578999999998 7999999999999998 89999999988888776652210    0      111 1111       2


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                      .+.....|+|||+++..
T Consensus       199 ~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          199 ETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HHTGGGCSEEEECSCTT
T ss_pred             HhhhccCCEEEECCCCC
Confidence            22334789999999764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.84  E-value=3e-05  Score=67.08  Aligned_cols=81  Identities=21%  Similarity=0.258  Sum_probs=55.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+|++++||..+++.+...|++|+++++++++++.+.+ +    +.  ..   ..|.. +.+ ..+.+.+.. 
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----ga--~~---~~~~~-~~~-~~~~~~~~~-  209 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L----GA--AY---VIDTS-TAP-LYETVMELT-  209 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TC--SE---EEETT-TSC-HHHHHHHHT-
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C----CC--cE---EEeCC-ccc-HHHHHHHHh-
Confidence            358999999999999999999999999999999999888765543 3    11  11   12443 212 222222211 


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      ...++|++|+++|.
T Consensus       210 ~~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 NGIGADAAIDSIGG  223 (340)
T ss_dssp             TTSCEEEEEESSCH
T ss_pred             CCCCCcEEEECCCC
Confidence            11379999999974

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.84  E-value=0.00012  Score=61.61  Aligned_cols=74  Identities=16%  Similarity=0.240  Sum_probs=57.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.++.|+.++++++.+++....    .+...  ++. +.   .      
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~----~~~~~--~~~-~l---~------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG----EVKAQ--AFE-QL---K------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS----CEEEE--EGG-GC---C------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC----CeeEe--eHH-Hh---c------
Confidence            688999999998 7999999999999997 89999999999999888875421    22222  222 11   0      


Q ss_pred             HHHcCCccEEEECCCC
Q 023555           95 WEAFGRIDALVNNAGV  110 (280)
Q Consensus        95 ~~~~g~id~li~~ag~  110 (280)
                          ...|+|||+.+.
T Consensus       186 ----~~aDiIInaTp~  197 (281)
T 3o8q_A          186 ----QSYDVIINSTSA  197 (281)
T ss_dssp             ----SCEEEEEECSCC
T ss_pred             ----CCCCEEEEcCcC
Confidence                378999999865

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.81  E-value=6.4e-05  Score=67.48  Aligned_cols=88  Identities=19%  Similarity=0.234  Sum_probs=58.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC--------CHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA--------NGAAIE   88 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--------~~~~~~   88 (280)
                      -.|++|||+|++|+||..+++.+...|++|+++++++++++.+ +++    +....+.....|+.+        +.++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL----GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc----CCCEEEecccccccccccccccccchhhh
Confidence            4589999999999999999999999999999999988877654 222    211111111112210        113344


Q ss_pred             HHHHHHHHHcC-CccEEEECCC
Q 023555           89 NSVQKAWEAFG-RIDALVNNAG  109 (280)
Q Consensus        89 ~~~~~~~~~~g-~id~li~~ag  109 (280)
                      .+.+++.+..+ ++|++|+++|
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHHHhCCCceEEEECCC
Confidence            45566655444 6999999997

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.80  E-value=0.00018  Score=62.69  Aligned_cols=78  Identities=24%  Similarity=0.240  Sum_probs=56.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++++++|+|+ |++|+++++.+...|++|++++|++++++.+.+....      .+..   +.. +.+++.+.+    
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~------~~~~---~~~-~~~~~~~~~----  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS------RVEL---LYS-NSAEIETAV----  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GSEE---EEC-CHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc------eeEe---eeC-CHHHHHHHH----
Confidence            467899999999 9999999999999999999999999888776544321      1111   112 223333322    


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                         ...|++|++++..
T Consensus       229 ---~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 ---AEADLLIGAVLVP  241 (361)
T ss_dssp             ---HTCSEEEECCCCT
T ss_pred             ---cCCCEEEECCCcC
Confidence               2789999999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.78  E-value=0.00013  Score=63.13  Aligned_cols=78  Identities=21%  Similarity=0.321  Sum_probs=54.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+|++|+||..+++.+...|++|+++++++++++.+. ++    +.  .. .+..+ .    +   +.+.+.+
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~----ga--~~-v~~~~-~----~---~~~~v~~  221 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV----GA--DI-VLPLE-E----G---WAKAVRE  221 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH----TC--SE-EEESS-T----T---HHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc----CC--cE-EecCc-h----h---HHHHHHH
Confidence            35899999999999999999999999999999999988876543 23    11  11 12222 1    1   2223333


Q ss_pred             Hc--CCccEEEECCCC
Q 023555           97 AF--GRIDALVNNAGV  110 (280)
Q Consensus        97 ~~--g~id~li~~ag~  110 (280)
                      ..  .++|++|+++|.
T Consensus       222 ~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          222 ATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             HTTTSCEEEEEESCC-
T ss_pred             HhCCCCceEEEECCch
Confidence            22  269999999984

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.77  E-value=6.9e-05  Score=65.48  Aligned_cols=74  Identities=16%  Similarity=0.249  Sum_probs=55.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -+..+|+|.|+ |++|+.+++.|++ .++|.+.+++.++++.+.+          ....+.+|+. +.+++.++++    
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~----------~~~~~~~d~~-d~~~l~~~~~----   76 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE----------FATPLKVDAS-NFDKLVEVMK----   76 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT----------TSEEEECCTT-CHHHHHHHHT----
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc----------cCCcEEEecC-CHHHHHHHHh----
Confidence            33447999998 9999999999875 5789999999887765421          3455788998 6666666554    


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                         +.|+||++++.
T Consensus        77 ---~~DvVi~~~p~   87 (365)
T 3abi_A           77 ---EFELVIGALPG   87 (365)
T ss_dssp             ---TCSEEEECCCG
T ss_pred             ---CCCEEEEecCC
Confidence               68999999864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.76  E-value=3e-05  Score=59.15  Aligned_cols=78  Identities=13%  Similarity=0.198  Sum_probs=54.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +..+++++|.|+ |.+|+.+++.|.+.|++|++++|+++..+.+.+    .  .  ....+..|.+ +.+.+.+    . 
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----~--~--g~~~~~~d~~-~~~~l~~----~-   80 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----E--F--SGFTVVGDAA-EFETLKE----C-   80 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----T--C--CSEEEESCTT-SHHHHHT----T-
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----c--C--CCcEEEecCC-CHHHHHH----c-
Confidence            677889999986 999999999999999999999999876543210    1  1  2334567776 4332221    1 


Q ss_pred             HHcCCccEEEECCC
Q 023555           96 EAFGRIDALVNNAG  109 (280)
Q Consensus        96 ~~~g~id~li~~ag  109 (280)
                       ...+.|++|.+.+
T Consensus        81 -~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 -GMEKADMVFAFTN   93 (155)
T ss_dssp             -TGGGCSEEEECSS
T ss_pred             -CcccCCEEEEEeC
Confidence             1236899999876

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.74  E-value=0.00015  Score=62.91  Aligned_cols=79  Identities=18%  Similarity=0.234  Sum_probs=54.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++++||+||+|+||..+++.+...|++|+++++++++++.+. ++    +.  ..   ..|.. +.+ ..+.+.+.... 
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~----Ga--~~---~~~~~-~~~-~~~~v~~~~~~-  231 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI----GA--AH---VLNEK-APD-FEATLREVMKA-  231 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH----TC--SE---EEETT-STT-HHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC--CE---EEECC-cHH-HHHHHHHHhcC-
Confidence            489999999999999999999999999999999988876553 33    11  11   12333 222 22222222211 


Q ss_pred             CCccEEEECCCC
Q 023555           99 GRIDALVNNAGV  110 (280)
Q Consensus        99 g~id~li~~ag~  110 (280)
                      .++|++|+++|.
T Consensus       232 ~g~D~vid~~g~  243 (349)
T 3pi7_A          232 EQPRIFLDAVTG  243 (349)
T ss_dssp             HCCCEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            279999999974

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.73  E-value=0.00038  Score=59.63  Aligned_cols=122  Identities=15%  Similarity=0.179  Sum_probs=72.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +.++.+++++.|+|+ |.+|.+++..|+..|.  +++++++++++++....++.........+... .+   +       
T Consensus         3 ~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~---~-------   70 (326)
T 3vku_A            3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA---E-------   70 (326)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC---C-------
T ss_pred             ccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC---c-------
Confidence            456778889999996 9999999999999988  79999999988887777776543211112211 11   1       


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                          .+.+...|++|..+|....  +  .++.   .+.++.|..    +++.+.+.+.+..+.+.++++|.
T Consensus        71 ----~~a~~~aDiVvi~ag~~~k--p--G~tR---~dL~~~N~~----I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           71 ----YSDAKDADLVVITAGAPQK--P--GETR---LDLVNKNLK----ILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             ----GGGGTTCSEEEECCCCC---------------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             ----HHHhcCCCEEEECCCCCCC--C--CchH---HHHHHHHHH----HHHHHHHHHHhcCCceEEEEccC
Confidence                1223478999999997421  1  2222   234455543    34555566666666778887765

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.71  E-value=0.00089  Score=57.77  Aligned_cols=121  Identities=16%  Similarity=0.207  Sum_probs=75.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      .-|++++|.|+|++|.+|.++|..++..|.  +|+++|.++++++....++....-...++.     .+.+   ..+.+ 
T Consensus         4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-----~t~d---~~~al-   74 (343)
T 3fi9_A            4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-----FTSD---IKEAL-   74 (343)
T ss_dssp             CCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-----EESC---HHHHH-
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-----EcCC---HHHHh-
Confidence            346678999999999999999999999995  799999998887776666765321111111     1112   12222 


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCe-EEEEec
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGS-VINISS  161 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~-vv~vsS  161 (280)
                            ...|++|..+|...  ++  ..+..   +.++.|+.-    ++.+.+.+.+....+. ++++|.
T Consensus        75 ------~dADvVvitaG~p~--kp--G~~R~---dLl~~N~~I----~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           75 ------TDAKYIVSSGGAPR--KE--GMTRE---DLLKGNAEI----AAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             ------TTEEEEEECCC-----------CHH---HHHHHHHHH----HHHHHHHHHHHCTTCCEEEECSS
T ss_pred             ------CCCCEEEEccCCCC--CC--CCCHH---HHHHHHHHH----HHHHHHHHHHhccCcEEEEEecC
Confidence                  37899999999742  11  23333   345555544    4455555555555674 677764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.70  E-value=0.00018  Score=59.44  Aligned_cols=84  Identities=18%  Similarity=0.265  Sum_probs=62.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcceE
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRAM   74 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~   74 (280)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.++ ..++.
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~  104 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-HIAIT  104 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEE
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-CcEEE
Confidence            3578899999997 7999999999999998 799999987                   678888888766543 34565


Q ss_pred             EEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           75 AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        75 ~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      .+..+++ . +..+++++       ..|++|.+..
T Consensus       105 ~~~~~~~-~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          105 PVNALLD-D-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             EECSCCC-H-HHHHHHHH-------TSSEEEECCS
T ss_pred             EEeccCC-H-hHHHHHHh-------CCCEEEEeCC
Confidence            6665564 2 33333332       6899998864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.67  E-value=0.00024  Score=63.95  Aligned_cols=85  Identities=18%  Similarity=0.216  Sum_probs=60.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEE--Eec--------cCCCHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV--ELD--------VSANGAA   86 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~D--------~~~~~~~   86 (280)
                      -.|++|||+|++|++|...++.+...|++|+++++++++++.+ +++    +.  ...+.  ..|        .+ +.++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l----Ga--~~vi~~~~~d~~~~~~~~~~-~~~~  298 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM----GA--EAIIDRNAEGYRFWKDENTQ-DPKE  298 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH----TC--CEEEETTTTTCCSEEETTEE-CHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh----CC--cEEEecCcCccccccccccc-chHH
Confidence            4589999999999999999999999999999999988877654 333    11  11111  111        12 3455


Q ss_pred             HHHHHHHHHHHcC--CccEEEECCC
Q 023555           87 IENSVQKAWEAFG--RIDALVNNAG  109 (280)
Q Consensus        87 ~~~~~~~~~~~~g--~id~li~~ag  109 (280)
                      ++.+.+.+.+..+  ++|++|.++|
T Consensus       299 ~~~~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          299 WKRFGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEcCC
Confidence            5666677766543  7999999987

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.66  E-value=0.0001  Score=64.44  Aligned_cols=75  Identities=15%  Similarity=0.242  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+|+ |+||..+++.+...|++|+++++++++++.+.+++    +.  ..   ..|.. +.+.+       .+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l----Ga--~~---v~~~~-~~~~~-------~~~  248 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF----GA--DS---FLVSR-DQEQM-------QAA  248 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS----CC--SE---EEETT-CHHHH-------HHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----CC--ce---EEecc-CHHHH-------HHh
Confidence            7899999996 99999999999999999999999988776554332    21  11   23444 32222       222


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .+++|++|.++|.
T Consensus       249 ~~~~D~vid~~g~  261 (366)
T 1yqd_A          249 AGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEEECCSS
T ss_pred             hCCCCEEEECCCc
Confidence            3579999999985

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.64  E-value=0.00011  Score=62.40  Aligned_cols=37  Identities=22%  Similarity=0.279  Sum_probs=32.7

Q ss_pred             CCCCcE-EEEecCCC-----------------h-hHHHHHHHHHHhCCeEEEEecC
Q 023555           16 QLDNKV-VMVTGASS-----------------G-LGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        16 ~l~~k~-vlItG~~~-----------------g-iG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      ++.||+ ||||+|..                 | .|.++|++++++|+.|+++.+.
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            478888 99998765                 5 9999999999999999999885

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.63  E-value=0.00018  Score=63.12  Aligned_cols=79  Identities=22%  Similarity=0.258  Sum_probs=57.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..+.+++++|+|+ |+||+++++.+...|++|+++++++++++.+.+.+    +.  .+   .++.+ +.+++.+++.  
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----g~--~~---~~~~~-~~~~l~~~l~--  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----CG--RI---HTRYS-SAYELEGAVK--  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TT--SS---EEEEC-CHHHHHHHHH--
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----CC--ee---EeccC-CHHHHHHHHc--
Confidence            3688999999998 99999999999999999999999988776654332    21  11   12233 3344444332  


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                           ..|++|++++..
T Consensus       231 -----~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 -----RADLVIGAVLVP  242 (377)
T ss_dssp             -----HCSEEEECCCCT
T ss_pred             -----CCCEEEECCCcC
Confidence                 589999998753

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.62  E-value=9.5e-05  Score=64.51  Aligned_cols=79  Identities=18%  Similarity=0.319  Sum_probs=54.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+||+|+||..+++.+...|++|+.+++++++++.+.+ +    +.  ..   ..|.. + +++.+.+.+.. 
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~----Ga--~~---~~~~~-~-~~~~~~~~~~~-  228 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L----GC--DR---PINYK-T-EPVGTVLKQEY-  228 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T----TC--SE---EEETT-T-SCHHHHHHHHC-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c----CC--cE---EEecC-C-hhHHHHHHHhc-
Confidence            358999999999999999999999999999999999877665432 2    21  11   12333 2 22233333221 


Q ss_pred             HcCCccEEEECCC
Q 023555           97 AFGRIDALVNNAG  109 (280)
Q Consensus        97 ~~g~id~li~~ag  109 (280)
                       .+++|++|+++|
T Consensus       229 -~~g~D~vid~~g  240 (362)
T 2c0c_A          229 -PEGVDVVYESVG  240 (362)
T ss_dssp             -TTCEEEEEECSC
T ss_pred             -CCCCCEEEECCC
Confidence             247999999987

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.62  E-value=0.0027  Score=54.42  Aligned_cols=118  Identities=16%  Similarity=0.144  Sum_probs=76.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .+.+++.|+|+ |.+|.+++..|+..|.  +|+++++++++++....+++...+.. ..+.....    +.         
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~----~~---------   68 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYG----TY---------   68 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEE----CG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeC----cH---------
Confidence            34568999996 9999999999999997  89999999988887777776542211 11222211    11         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                        +.+...|++|..+|...  .+  ..+..+   .++.|..-    ++.+.+.+.+..+.+.++++|.
T Consensus        69 --~a~~~aDvVvi~ag~p~--kp--G~~R~d---L~~~N~~I----v~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           69 --EDCKDADIVCICAGANQ--KP--GETRLE---LVEKNLKI----FKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             --GGGTTCSEEEECCSCCC--CT--TCCHHH---HHHHHHHH----HHHHHHHHHHTTCCSEEEECSS
T ss_pred             --HHhCCCCEEEEecccCC--CC--CccHHH---HHHHHHHH----HHHHHHHHHHhcCCeEEEEcCC
Confidence              12347899999998742  21  334433   45555544    4455555555555678888775

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.62  E-value=0.00019  Score=62.08  Aligned_cols=76  Identities=21%  Similarity=0.337  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+||+|+||..+++.+...|++|+.+ +++++++.+ +++    +  ..  .  +| . +.+ ..+.+.+.. .
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l----G--a~--~--i~-~-~~~-~~~~~~~~~-~  213 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL----G--AT--P--ID-A-SRE-PEDYAAEHT-A  213 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH----T--SE--E--EE-T-TSC-HHHHHHHHH-T
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc----C--CC--E--ec-c-CCC-HHHHHHHHh-c
Confidence            58999999999999999999999999999998 777765543 333    1  11  1  33 2 212 222222221 1


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      ..++|++|.++|
T Consensus       214 ~~g~D~vid~~g  225 (343)
T 3gaz_A          214 GQGFDLVYDTLG  225 (343)
T ss_dssp             TSCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            237999999987

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.60  E-value=0.00023  Score=61.44  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=54.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+|+ |++|..+++.+...|++|+.+++++++++.+. ++    +.  .   ..+|.+ +. ++.+.+.++. 
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga--~---~~~d~~-~~-~~~~~~~~~~-  228 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL----GA--D---LVVNPL-KE-DAAKFMKEKV-  228 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT----TC--S---EEECTT-TS-CHHHHHHHHH-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC----CC--C---EEecCC-Cc-cHHHHHHHHh-
Confidence            35899999999 88999999999999999999999988776543 22    21  1   124554 22 2222232222 


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                        +++|++|+++|.
T Consensus       229 --~~~d~vid~~g~  240 (339)
T 1rjw_A          229 --GGVHAAVVTAVS  240 (339)
T ss_dssp             --SSEEEEEESSCC
T ss_pred             --CCCCEEEECCCC
Confidence              589999999974

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.59  E-value=0.00022  Score=61.77  Aligned_cols=77  Identities=16%  Similarity=0.208  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|+++||+|+ |++|..+++.+...|+ +|+.+++++++++.+. ++    +.  ..   ..|.. + +++.   +.+.+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~----Ga--~~---~~~~~-~-~~~~---~~v~~  230 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV----GA--DY---VINPF-E-EDVV---KEVMD  230 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH----TC--SE---EECTT-T-SCHH---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----CC--CE---EECCC-C-cCHH---HHHHH
Confidence            7899999999 9999999999999999 8999999987766543 33    11  11   13443 2 1222   22322


Q ss_pred             Hc--CCccEEEECCCC
Q 023555           97 AF--GRIDALVNNAGV  110 (280)
Q Consensus        97 ~~--g~id~li~~ag~  110 (280)
                      ..  ..+|++|.++|.
T Consensus       231 ~~~g~g~D~vid~~g~  246 (348)
T 2d8a_A          231 ITDGNGVDVFLEFSGA  246 (348)
T ss_dssp             HTTTSCEEEEEECSCC
T ss_pred             HcCCCCCCEEEECCCC
Confidence            22  269999999974

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.58  E-value=0.00016  Score=56.58  Aligned_cols=78  Identities=12%  Similarity=0.097  Sum_probs=55.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++.++.++|.|+ |.+|+.+++.|.+. |++|+++++++++.+.+.+    .     ....+.+|.+ +.+.++++    
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~-----g~~~~~gd~~-~~~~l~~~----  100 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E-----GRNVISGDAT-DPDFWERI----  100 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T-----TCCEEECCTT-CHHHHHTB----
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C-----CCCEEEcCCC-CHHHHHhc----
Confidence            466778889984 99999999999999 9999999999887665432    1     2334667877 43322211    


Q ss_pred             HHHcCCccEEEECCC
Q 023555           95 WEAFGRIDALVNNAG  109 (280)
Q Consensus        95 ~~~~g~id~li~~ag  109 (280)
                       ....+.|.+|.+.+
T Consensus       101 -~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 -LDTGHVKLVLLAMP  114 (183)
T ss_dssp             -CSCCCCCEEEECCS
T ss_pred             -cCCCCCCEEEEeCC
Confidence             01347899998765

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.58  E-value=0.00015  Score=60.65  Aligned_cols=48  Identities=31%  Similarity=0.449  Sum_probs=44.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   64 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~   64 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++++++.+++.
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            688999999998 6999999999999996 89999999999998888774

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.58  E-value=0.00027  Score=61.15  Aligned_cols=78  Identities=14%  Similarity=0.253  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+||+|++|..+++.+...|++|+.+++++++++.+.+ +    +.  ..   ..|.. +  +..+.+.+.  .
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga--~~---vi~~~-~--~~~~~~~~~--~  214 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M----GA--DI---VLNHK-E--SLLNQFKTQ--G  214 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H----TC--SE---EECTT-S--CHHHHHHHH--T
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c----CC--cE---EEECC-c--cHHHHHHHh--C
Confidence            68999999999999999999999999999999999887765433 3    11  11   12333 1  122223332  2


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .+.+|++++++|.
T Consensus       215 ~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          215 IELVDYVFCTFNT  227 (346)
T ss_dssp             CCCEEEEEESSCH
T ss_pred             CCCccEEEECCCc
Confidence            3479999999874

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.57  E-value=0.0023  Score=54.60  Aligned_cols=119  Identities=16%  Similarity=0.187  Sum_probs=75.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC--hhHHHHHHHHHHhhc---CCCcceEEEEeccCCCHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR--VDRLKSLCDEINKQS---GSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~--~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      |.++.+++.|+|+ |.+|.+++..|+..|. +|++++++  ++.++....++....   +...++.. ..    +.    
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~----d~----   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TS----DY----   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ES----CG----
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cC----CH----
Confidence            3567788999997 9999999999999999 99999999  555554444444321   11112211 11    11    


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                             +.+...|++|..+|....  +  ..+..+   .++.|..-    ++.+.+.+.+..+.+.++++|.
T Consensus        74 -------~a~~~aDvVIiaag~p~k--p--g~~R~d---l~~~N~~i----~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           74 -------ADTADSDVVVITAGIARK--P--GMSRDD---LVATNSKI----MKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             -------GGGTTCSEEEECCSCCCC--T--TCCHHH---HHHHHHHH----HHHHHHHHHHHCTTCEEEECCS
T ss_pred             -------HHhCCCCEEEEeCCCCCC--C--CCCHHH---HHHHHHHH----HHHHHHHHHHhCCCeEEEECCC
Confidence                   234589999999997422  1  344443   45555544    4455555555555678888875

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.55  E-value=0.0024  Score=53.52  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=37.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      -+++.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.+
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            367788876 88999999999999999999999998877766653

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.54  E-value=0.00046  Score=51.48  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=54.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++ .++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+.         ....+..|.+ +.+.++++     
T Consensus         5 ~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~---------g~~~i~gd~~-~~~~l~~a-----   67 (140)
T 3fwz_A            5 DICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRER---------GVRAVLGNAA-NEEIMQLA-----   67 (140)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---------TCEEEESCTT-SHHHHHHT-----
T ss_pred             cCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc---------CCCEEECCCC-CHHHHHhc-----
Confidence            3444 5667776 8999999999999999999999999877665421         3556788988 54433322     


Q ss_pred             HHcCCccEEEECCC
Q 023555           96 EAFGRIDALVNNAG  109 (280)
Q Consensus        96 ~~~g~id~li~~ag  109 (280)
                       ...+.|.+|...+
T Consensus        68 -~i~~ad~vi~~~~   80 (140)
T 3fwz_A           68 -HLECAKWLILTIP   80 (140)
T ss_dssp             -TGGGCSEEEECCS
T ss_pred             -CcccCCEEEEECC
Confidence             1236788888765

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.53  E-value=8.4e-05  Score=55.85  Aligned_cols=71  Identities=13%  Similarity=0.315  Sum_probs=53.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|+.++.+++.+++.        ....  +.. +   .++.+.      
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------~~~~--~~~-~---~~~~~~------   79 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------YEYV--LIN-D---IDSLIK------   79 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------CEEE--ECS-C---HHHHHH------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------CceE--eec-C---HHHHhc------
Confidence            899999996 999999999999999999999999998887766652        1111  122 2   233332      


Q ss_pred             CCccEEEECCCCC
Q 023555           99 GRIDALVNNAGVS  111 (280)
Q Consensus        99 g~id~li~~ag~~  111 (280)
                       ..|++|++++..
T Consensus        80 -~~Divi~at~~~   91 (144)
T 3oj0_A           80 -NNDVIITATSSK   91 (144)
T ss_dssp             -TCSEEEECSCCS
T ss_pred             -CCCEEEEeCCCC
Confidence             689999998753

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.52  E-value=0.00019  Score=60.82  Aligned_cols=42  Identities=29%  Similarity=0.347  Sum_probs=38.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .|+++||+|++|++|..+++.+...|++|+.+++++++++.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999998877654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.52  E-value=0.00079  Score=56.67  Aligned_cols=94  Identities=9%  Similarity=0.158  Sum_probs=67.1

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh------------------hHHHHHHHHHHhhcCCCcce
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ...+|++++|+|.|+ ||+|..+++.|+..|. ++.++|++.                  .+.+.+.+.+.+.++ .+++
T Consensus        30 ~q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP-~v~v  107 (292)
T 3h8v_A           30 DYEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP-DVLF  107 (292)
T ss_dssp             --CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT-TSEE
T ss_pred             HHHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC-CcEE
Confidence            345788999999987 8999999999999998 688998765                  567777777766543 5677


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHH----cCCccEEEECCC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEA----FGRIDALVNNAG  109 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~----~g~id~li~~ag  109 (280)
                      .....+++ ..+.++.+++.+...    ....|+||.+..
T Consensus       108 ~~~~~~l~-~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          108 EVHNYNIT-TVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             EEECCCTT-SHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             EEecccCC-cHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77777776 445555555443221    136899987763

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.50  E-value=0.00098  Score=57.31  Aligned_cols=117  Identities=14%  Similarity=0.160  Sum_probs=72.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--e-----EEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--R-----IVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~-----v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .+|+||||+|.||.+++..|+..|.  .     ++++|.++  +.++-...+++......  ..  ....+++   ..  
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~--~~~~~~~---~~--   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK--DVIATDK---EE--   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE--EEEEESC---HH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cC--CEEEcCC---cH--
Confidence            5799999999999999999998876  5     89999974  45666666665532111  11  1111211   11  


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCC-eEEEEec
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEG-SVINISS  161 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g-~vv~vsS  161 (280)
                           +.+.+.|++|+.||....   + ..+.   .+.++.|+....    .+.+.+.+...++ +++++|.
T Consensus        75 -----~~~~daDvVvitAg~prk---p-G~tR---~dll~~N~~i~~----~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           75 -----IAFKDLDVAILVGSMPRR---D-GMER---KDLLKANVKIFK----CQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             -----HHTTTCSEEEECCSCCCC---T-TCCT---TTTHHHHHHHHH----HHHHHHHHHSCTTCEEEECSS
T ss_pred             -----HHhCCCCEEEEeCCCCCC---C-CCCH---HHHHHHHHHHHH----HHHHHHHHhCCCCeEEEEcCC
Confidence                 223478999999987422   1 2232   234566666554    4444555555456 5777775

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.43  E-value=0.0032  Score=54.02  Aligned_cols=121  Identities=12%  Similarity=0.142  Sum_probs=78.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ....+++.|+|+ |.+|.+++..|+..|.  .++++++++++++....++...............   ++.         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~---~d~---------   82 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS---KDY---------   82 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC---SSG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc---CCH---------
Confidence            456788999997 9999999999999998  7999999998888877777654211111111111   121         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                        +.+...|++|..+|....   + .++..+   .++.|..    +++.+.+.+.+..+.+.++++|.-
T Consensus        83 --~~~~~aDiVvi~aG~~~k---p-G~tR~d---L~~~N~~----I~~~i~~~i~~~~p~a~vlvvtNP  138 (331)
T 4aj2_A           83 --SVTANSKLVIITAGARQQ---E-GESRLN---LVQRNVN----IFKFIIPNVVKYSPQCKLLIVSNP  138 (331)
T ss_dssp             --GGGTTEEEEEECCSCCCC---T-TCCGGG---GHHHHHH----HHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             --HHhCCCCEEEEccCCCCC---C-CccHHH---HHHHHHH----HHHHHHHHHHHHCCCeEEEEecCh
Confidence              123478999999997422   1 334433   4444543    445555555555556788888753

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.41  E-value=0.00024  Score=61.38  Aligned_cols=77  Identities=17%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|+++||+|+ |++|..+++.+...|+ +|+.+++++++++.+.+ + .      .   ...|.. + +++.+.+.++. 
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a------~---~v~~~~-~-~~~~~~~~~~~-  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A------D---RLVNPL-E-EDLLEVVRRVT-  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C------S---EEECTT-T-SCHHHHHHHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H------H---hccCcC-c-cCHHHHHHHhc-
Confidence            7899999999 9999999999888999 89999999876553311 1 0      1   123443 2 22333333332 


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                       .+++|++|.++|.
T Consensus       229 -~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 -GSGVEVLLEFSGN  241 (343)
T ss_dssp             -SSCEEEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             3479999999974

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.39  E-value=0.00071  Score=59.88  Aligned_cols=73  Identities=23%  Similarity=0.439  Sum_probs=54.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++.|++++|.|+ |++|+.+++.+...|+ +|++++|+.++++++.+++.      ..  .  .+..    ++.+.+   
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g------~~--~--~~~~----~l~~~l---  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------GE--A--VRFD----ELVDHL---  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------CE--E--CCGG----GHHHHH---
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------Cc--e--ecHH----hHHHHh---
Confidence            578999999998 9999999999999999 89999999988766666552      11  1  2222    223332   


Q ss_pred             HHHcCCccEEEECCCC
Q 023555           95 WEAFGRIDALVNNAGV  110 (280)
Q Consensus        95 ~~~~g~id~li~~ag~  110 (280)
                          ...|++|++++.
T Consensus       226 ----~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ----ARSDVVVSATAA  237 (404)
T ss_dssp             ----HTCSEEEECCSS
T ss_pred             ----cCCCEEEEccCC
Confidence                268999999864

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.36  E-value=0.0016  Score=55.55  Aligned_cols=149  Identities=15%  Similarity=0.171  Sum_probs=83.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|.|+||+|.+|..++..|+..|  ..|+++++++  .+....++.+... ..++.....  +   .+.++++       
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~-~~~l~~~~~--t---~d~~~a~-------   66 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIET-RATVKGYLG--P---EQLPDCL-------   66 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSS-SCEEEEEES--G---GGHHHHH-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCc-CceEEEecC--C---CCHHHHh-------
Confidence            58999999999999999999988  6799999987  3334445543221 111211100  0   1122233       


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc----------CC
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS----------RG  168 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~----------~~  168 (280)
                      ...|++|+.+|.....    ..+..+   .+..|+....    .+.+.+.+....+.+|++|.-....          ..
T Consensus        67 ~~aDvVvi~ag~~~~~----g~~r~d---l~~~n~~i~~----~i~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~  135 (314)
T 1mld_A           67 KGCDVVVIPAGVPRKP----GMTRDD---LFNTNATIVA----TLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHG  135 (314)
T ss_dssp             TTCSEEEECCSCCCCT----TCCGGG---GHHHHHHHHH----HHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCCcCCCC----CCcHHH---HHHHHHHHHH----HHHHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcC
Confidence            3789999999975321    222222   3455555544    4444445545567888886533211          11


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHhC
Q 023555          169 QLPGGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       169 ~~~~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                      .+|..-..+..-.-...+-..+|..+.
T Consensus       136 ~~p~~rvig~t~Ld~~r~~~~la~~l~  162 (314)
T 1mld_A          136 VYNPNKIFGVTTLDIVRANAFVAELKG  162 (314)
T ss_dssp             CCCTTSEEECCHHHHHHHHHHHHHHTT
T ss_pred             CCCcceEEEeecccHHHHHHHHHHHhC
Confidence            234434444433223445556666553

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.36  E-value=0.00053  Score=55.17  Aligned_cols=73  Identities=11%  Similarity=0.162  Sum_probs=54.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +++|.|+ |.+|+++++.|.+.|++|++++++++..+.+.+..        ...++..|.+ +.+.++++      ...+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~--------~~~~i~gd~~-~~~~l~~a------~i~~   65 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL--------KATIIHGDGS-HKEILRDA------EVSK   65 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS--------SSEEEESCTT-SHHHHHHH------TCCT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc--------CCeEEEcCCC-CHHHHHhc------Cccc
Confidence            4889996 99999999999999999999999998877654332        3456888988 54433322      2347


Q ss_pred             ccEEEECCC
Q 023555          101 IDALVNNAG  109 (280)
Q Consensus       101 id~li~~ag  109 (280)
                      .|.+|...+
T Consensus        66 ad~vi~~~~   74 (218)
T 3l4b_C           66 NDVVVILTP   74 (218)
T ss_dssp             TCEEEECCS
T ss_pred             CCEEEEecC
Confidence            899887764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.35  E-value=0.01  Score=50.00  Aligned_cols=113  Identities=12%  Similarity=0.135  Sum_probs=72.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhc---CCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQS---GSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++.|+|+ |.+|.+++..|+..|.  +|++++++++.++....++....   +...++.. ..| .              
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d-~--------------   64 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG-GAD-Y--------------   64 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE-ESC-G--------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE-eCC-H--------------
Confidence            5789999 9999999999999998  89999999987764444443322   11112211 112 1              


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +.+...|++|..+|....   + ..+..++   +..|    ..+++.+.+.+.+..+.+.++++|.
T Consensus        65 ~a~~~aDiVViaag~~~k---p-G~~R~dl---~~~N----~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           65 SLLKGSEIIVVTAGLARK---P-GMTRLDL---AHKN----AGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             GGGTTCSEEEECCCCCCC---S-SCCHHHH---HHHH----HHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             HHhCCCCEEEECCCCCCC---C-CCcHHHH---HHHH----HHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            122378999999987421   1 3455443   4444    3455666677777666778888875

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.33  E-value=0.0099  Score=50.69  Aligned_cols=119  Identities=13%  Similarity=0.234  Sum_probs=73.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +++..+|.|+|+ |.+|.+++..|+..|.  .|++++.++++++.....+....+.. ..+.. ..|   +         
T Consensus         3 ~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v-~~~---~---------   68 (317)
T 3d0o_A            3 KFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRV-KAG---E---------   68 (317)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEE-EEC---C---------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEE-EeC---C---------
Confidence            355678999998 9999999999999885  79999999877765555554321100 11111 112   1         


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                        .+.+...|++|..+|....  +  ..+..+   .+..|.    .+++.+.+.+.+..+.+.+|++|.
T Consensus        69 --~~a~~~aDvVvi~ag~~~~--~--g~~r~d---l~~~n~----~i~~~i~~~i~~~~p~a~viv~tN  124 (317)
T 3d0o_A           69 --YSDCHDADLVVICAGAAQK--P--GETRLD---LVSKNL----KIFKSIVGEVMASKFDGIFLVATN  124 (317)
T ss_dssp             --GGGGTTCSEEEECCCCCCC--T--TCCHHH---HHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             --HHHhCCCCEEEECCCCCCC--C--CCcHHH---HHHHHH----HHHHHHHHHHHHhCCCcEEEEecC
Confidence              1223478999999987422  1  234433   233333    345566666666565677777654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.30  E-value=0.0058  Score=52.19  Aligned_cols=117  Identities=15%  Similarity=0.213  Sum_probs=75.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhc---CCCcceEEEEeccCCCHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQS---GSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|+++++++++++....++....   +...++.. ..    +.        
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-t~----d~--------   68 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-TN----DY--------   68 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ES----CG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-cC----CH--------
Confidence            45578889995 9999999999999988 99999999888776666665432   11112211 11    11        


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                         +.+...|++|..+|....   + .++..+   .+..|..    +++.+.+.+.+..+.+.++++|.
T Consensus        69 ---~a~~~aDvVIi~ag~p~k---~-G~~R~d---l~~~N~~----i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           69 ---KDLENSDVVIVTAGVPRK---P-GMSRDD---LLGINIK----VMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             ---GGGTTCSEEEECCSCCCC---T-TCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ---HHHCCCCEEEEcCCcCCC---C-CCCHHH---HHHHhHH----HHHHHHHHHHHHCCCcEEEEecC
Confidence               123478999999987422   1 344444   3444443    44555555666555678888764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.29  E-value=4.4e-05  Score=64.00  Aligned_cols=43  Identities=19%  Similarity=0.381  Sum_probs=38.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   59 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~   59 (280)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++++++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            578999999997 7999999999999999 899999998776554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.28  E-value=0.0019  Score=55.82  Aligned_cols=42  Identities=29%  Similarity=0.301  Sum_probs=36.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -.|+++||+|+ |++|...++.+...|++|+.+++++++++.+
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  208 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA  208 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            35899999997 8999999998888999999999998876654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.27  E-value=0.015  Score=50.12  Aligned_cols=121  Identities=14%  Similarity=0.165  Sum_probs=72.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-------eEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      .++.-+|.|+||+|+||++++..|+....       .+.|.|.++.  .++-...+++...- ........   ..+.  
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~-~~~~~~~~---~~~~--   94 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAF-PLLDKVVV---TADP--   94 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTC-TTEEEEEE---ESCH--
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCc-cCCCcEEE---cCCh--
Confidence            56667999999999999999999987643       5888888653  34555555654321 11111111   1121  


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEec
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISS  161 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS  161 (280)
                       .       +.+...|++|-.||...  ++  .++.+++   ++.|..    +++.+.+.+.+.. +...|+.+|.
T Consensus        95 -~-------~a~~~advVvi~aG~pr--kp--GmtR~DL---l~~Na~----I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           95 -R-------VAFDGVAIAIMCGAFPR--KA--GMERKDL---LEMNAR----IFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             -H-------HHTTTCSEEEECCCCCC--CT--TCCHHHH---HHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             -H-------HHhCCCCEEEECCCCCC--CC--CCCHHHH---HHHhHH----HHHHHHHHHHhhccCceEEEEeCC
Confidence             1       22458999999999752  22  4566654   455543    4455555555532 2345666654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.27  E-value=0.0034  Score=53.72  Aligned_cols=117  Identities=16%  Similarity=0.184  Sum_probs=73.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhc---CCCcceEEEEeccCCCHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQS---GSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|+++++++++++....++....   +...++.. ..    +.        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~----d~--------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AN----DY--------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ES----SG--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eC----CH--------
Confidence            56678999998 9999999999999998 99999999887765555554431   11112211 11    21        


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                         +.+...|++|..+|....  +  ..+..   +.+..|.    .+++.+.+.+.+..+.+.++++|.
T Consensus        71 ---~a~~~aDiVIiaag~p~k--~--G~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           71 ---AAIEGADVVIVTAGVPRK--P--GMSRD---DLLGINL----KVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             ---GGGTTCSEEEECCSCCCC---------C---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ---HHHCCCCEEEEccCcCCC--C--CCCHH---HHHHhhH----HHHHHHHHHHHHHCCCeEEEecCC
Confidence               123478999999987422  1  22222   2344444    445555666666555678888875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.22  E-value=0.002  Score=55.95  Aligned_cols=82  Identities=23%  Similarity=0.209  Sum_probs=56.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|+++||+|+ |++|...++.+...|++ |+.+++++++++.+. ++ .   .  .+.....|.. +.++   +.+++.
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~---~--~~~~~~~~~~-~~~~---~~~~v~  245 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C---P--EVVTHKVERL-SAEE---SAKKIV  245 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C---T--TCEEEECCSC-CHHH---HHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c---h--hccccccccc-chHH---HHHHHH
Confidence            35899999998 99999999988889997 899999988776543 33 1   1  2333334433 2333   334444


Q ss_pred             HHc--CCccEEEECCCC
Q 023555           96 EAF--GRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~--g~id~li~~ag~  110 (280)
                      +..  .++|++|.++|.
T Consensus       246 ~~t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          246 ESFGGIEPAVALECTGV  262 (363)
T ss_dssp             HHTSSCCCSEEEECSCC
T ss_pred             HHhCCCCCCEEEECCCC
Confidence            433  369999999874

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.20  E-value=0.01  Score=50.82  Aligned_cols=119  Identities=15%  Similarity=0.168  Sum_probs=75.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +-+..+|.|+|+ |.+|.+++..++..+.  .+++.|.++++++....++.........+... .|   +.         
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~---~~---------   71 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA---EY---------   71 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC---CG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC---CH---------
Confidence            455678999998 9999999999998886  79999999888877677775532111112111 12   11         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                        +.+...|++|..+|....  +  ..+.++   .+..|.    .+++.+.+.+.+..+.+.+|++|.
T Consensus        72 --~a~~~aDvVii~ag~~~k--~--g~~R~d---l~~~n~----~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           72 --SDAKDADLVVITAGAPQK--P--GETRLD---LVNKNL----KILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             --GGGGGCSEEEECCCCC---------CHHH---HHHHHH----HHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             --HHhCCCCEEEEcCCCCCC--C--CCCHHH---HHHHHH----HHHHHHHHHHHHHCCCeEEEEeCC
Confidence              123478999999987421  1  234433   334444    345555666666566788888765

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.19  E-value=0.0011  Score=58.01  Aligned_cols=77  Identities=19%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+||+|+||..+++.+...|++|+.+++ +++.+.+ +++    +.  ..   ..|.. +.+    ..+++.+
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~l----Ga--~~---v~~~~-~~~----~~~~~~~  245 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKL----GA--DD---VIDYK-SGS----VEEQLKS  245 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHT----TC--SE---EEETT-SSC----HHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHc----CC--CE---EEECC-chH----HHHHHhh
Confidence            35899999999999999999999999999998884 4554433 332    21  11   12443 212    2222222


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                       .+++|++|.++|.
T Consensus       246 -~~g~D~vid~~g~  258 (375)
T 2vn8_A          246 -LKPFDFILDNVGG  258 (375)
T ss_dssp             -SCCBSEEEESSCT
T ss_pred             -cCCCCEEEECCCC
Confidence             2579999999984

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.15  E-value=0.0021  Score=53.01  Aligned_cols=84  Identities=23%  Similarity=0.363  Sum_probs=60.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcceE
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRAM   74 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~   74 (280)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+.+.++ .+++.
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~  101 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP-DIQLT  101 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC-CCEEE
Confidence            4678999999998 7899999999999998 578886542                   567777777766543 44566


Q ss_pred             EEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           75 AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        75 ~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      .+..+++  .+...++++       ..|+||++..
T Consensus       102 ~~~~~~~--~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          102 ALQQRLT--GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             EECSCCC--HHHHHHHHH-------HCSEEEECCS
T ss_pred             EEeccCC--HHHHHHHHh-------cCCEEEECCC
Confidence            6655554  234444443       5799998864

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.02  E-value=0.00059  Score=57.25  Aligned_cols=45  Identities=18%  Similarity=0.311  Sum_probs=40.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD   61 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~   61 (280)
                      ++++|+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++++++.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            578999999997 6999999999999999 89999999988776543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.0022  Score=55.94  Aligned_cols=81  Identities=19%  Similarity=0.258  Sum_probs=54.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++    +.  ..   ..|..+..+++.+.+.++.
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga--~~---vi~~~~~~~~~~~~~~~~~  259 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF----GA--TD---FVNPNDHSEPISQVLSKMT  259 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TC--CE---EECGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh----CC--ce---EEeccccchhHHHHHHHHh
Confidence            35889999995 9999999998888999 7999999988877543 22    21  11   1233310122333343332


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      .  +++|++|.++|.
T Consensus       260 ~--~g~D~vid~~g~  272 (374)
T 1cdo_A          260 N--GGVDFSLECVGN  272 (374)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  479999999974

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.97  E-value=0.018  Score=49.17  Aligned_cols=116  Identities=12%  Similarity=0.109  Sum_probs=75.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcC--CCcceEEEEeccCCCHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSG--SSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..+++.|+|+ |.+|.+++..++..|.  .|++++.++++++....++.....  ...++ ....|..            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i-~~t~d~~------------   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKI-VSGKDYS------------   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEE-EEESSSC------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeE-EEcCCHH------------
Confidence            4578999998 9999999999999998  799999999888777666655321  11112 1122322            


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                         .+...|++|-.+|.....    .++..+   .+..|.    .+.+.+.+.+.+..+.+.++++|.
T Consensus        86 ---~~~daDiVIitaG~p~kp----G~tR~d---ll~~N~----~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           86 ---VSAGSKLVVITAGARQQE----GESRLN---LVQRNV----NIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             ---SCSSCSEEEECCSCCCCS----SCCTTG---GGHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ---HhCCCCEEEEeCCCCCCC----CCCHHH---HHHhhH----HHHHHHHHHHHhhCCCceEEeCCC
Confidence               134789999999975322    223222   233333    345555566666555778888875

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.97  E-value=0.022  Score=48.37  Aligned_cols=115  Identities=17%  Similarity=0.140  Sum_probs=73.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhC--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +++.|+|+ |.+|.+++..|+..+  ..+++.|.++++++....++.........+... .+   +.           +.
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~---~~-----------~a   64 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG---SY-----------GD   64 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC---CG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC---CH-----------HH
Confidence            36889998 999999999999887  479999999888887677776532111111111 11   11           12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +...|++|..+|....  +  ..+..+   .+..|.    .+++.+.+.+.+..+.+.+|++|.
T Consensus        65 ~~~aD~Vii~ag~~~~--~--g~~r~d---l~~~n~----~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           65 LEGARAVVLAAGVAQR--P--GETRLQ---LLDRNA----QVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             GTTEEEEEECCCCCCC--T--TCCHHH---HHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             hCCCCEEEECCCCCCC--C--CcCHHH---HHHhhH----HHHHHHHHHHHHHCCCcEEEEecC
Confidence            3478999999987422  1  344443   233343    345555666666566788888765

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.95  E-value=0.0042  Score=53.39  Aligned_cols=78  Identities=15%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+|+ |++|...++.+...|++|+.+++++++++.+ +++    +.  ..   ..|.. +.+..    +.+.+
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l----Ga--~~---~i~~~-~~~~~----~~~~~  228 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL----GA--EV---AVNAR-DTDPA----AWLQK  228 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT----TC--SE---EEETT-TSCHH----HHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc----CC--CE---EEeCC-CcCHH----HHHHH
Confidence            46899999987 8999999999999999999999998877754 222    21  11   12333 21222    22222


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      ..+++|++|.++|.
T Consensus       229 ~~g~~d~vid~~g~  242 (340)
T 3s2e_A          229 EIGGAHGVLVTAVS  242 (340)
T ss_dssp             HHSSEEEEEESSCC
T ss_pred             hCCCCCEEEEeCCC
Confidence            34689999999863

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.95  E-value=0.0049  Score=52.95  Aligned_cols=120  Identities=12%  Similarity=0.087  Sum_probs=69.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhh---cCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQ---SGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      .+..+|.|.|+ |.+|.++|..|+..|. +|++++++++.++.....+...   .+...++..     +.+.   ++.+ 
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~---~ea~-   76 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSY---EAAL-   76 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSH---HHHH-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCH---HHHh-
Confidence            34457999998 9999999999999998 9999999988777644444332   111111211     1121   2222 


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCC---CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDL---TEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                            ...|++|..+|.....+  .+.   +..   ..+..|    ..+.+.+.+.+.+..+.+.+|++|.
T Consensus        77 ------~~aDiVi~a~g~p~~~g--~~~~~~~r~---dl~~~n----~~i~~~i~~~i~~~~p~a~vi~~tN  133 (331)
T 1pzg_A           77 ------TGADCVIVTAGLTKVPG--KPDSEWSRN---DLLPFN----SKIIREIGQNIKKYCPKTFIIVVTN  133 (331)
T ss_dssp             ------TTCSEEEECCSCSSCTT--CCGGGCCGG---GGHHHH----HHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ------CCCCEEEEccCCCCCCC--cccCCCCHH---HHHHHH----HHHHHHHHHHHHHHCCCcEEEEEcC
Confidence                  37899999998642211  100   111   112223    3344555555555544566666654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.93  E-value=0.003  Score=54.88  Aligned_cols=78  Identities=14%  Similarity=0.146  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+| +|++|...++.+...|++|+.+++++++++.+ +++    +.  .. .  .| . +.+++.+.+.++.. 
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l----Ga--~~-v--i~-~-~~~~~~~~v~~~~~-  254 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL----GA--DH-G--IN-R-LEEDWVERVYALTG-  254 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH----TC--SE-E--EE-T-TTSCHHHHHHHHHT-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc----CC--CE-E--Ec-C-CcccHHHHHHHHhC-
Confidence            589999999 89999999999999999999999998877654 333    11  11 1  23 2 11222233332221 


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      ..++|++|.++|
T Consensus       255 g~g~D~vid~~g  266 (363)
T 3uog_A          255 DRGADHILEIAG  266 (363)
T ss_dssp             TCCEEEEEEETT
T ss_pred             CCCceEEEECCC
Confidence            127999999998

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.92  E-value=0.033  Score=47.27  Aligned_cols=149  Identities=13%  Similarity=0.167  Sum_probs=83.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHh-C--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKA-G--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~-G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|.|+||+|.+|.+++..|+.+ +  ..+++++.++ .++-...+++.. ....++.....  +++    .       +.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~-~~~~~v~~~~~--~~~----~-------~~   66 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-PTAVKIKGFSG--EDA----T-------PA   66 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS-CSSEEEEEECS--SCC----H-------HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC-CCCceEEEecC--CCc----H-------HH
Confidence            5889999999999999999886 5  3699999987 444444555442 11112221111  111    1       12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc---------cCC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAAT---------SRG  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~---------~~~  168 (280)
                      +...|++|..+|...  ++  .++..+   .++.|..-.    +.+.+.+.+..+.+.++++|.-...         ...
T Consensus        67 ~~~aDivii~ag~~r--kp--G~~R~d---ll~~N~~I~----~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a~~~~k~s  135 (312)
T 3hhp_A           67 LEGADVVLISAGVAR--KP--GMDRSD---LFNVNAGIV----KNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKA  135 (312)
T ss_dssp             HTTCSEEEECCSCSC--CT--TCCHHH---HHHHHHHHH----HHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHT
T ss_pred             hCCCCEEEEeCCCCC--CC--CCCHHH---HHHHHHHHH----HHHHHHHHHHCCCcEEEEecCcchhHHHHHHHHHHHc
Confidence            237899999999742  11  345544   455555444    4444555555556788888752211         111


Q ss_pred             CC-CCCCCChhhHHHHHHHHHHHHHHhC
Q 023555          169 QL-PGGVAYASSKAGLNAMTKCLSLELG  195 (280)
Q Consensus       169 ~~-~~~~~Y~~sK~a~~~l~~~la~~~~  195 (280)
                      +. |..-..+..-.=...+-..++..+.
T Consensus       136 g~~p~~rv~G~~~LD~~R~~~~la~~lg  163 (312)
T 3hhp_A          136 GVYDKNKLFGVTTLDIIRSNTFVAELKG  163 (312)
T ss_dssp             TCCCTTSEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCCCcceEEEEechhHHHHHHHHHHHhC
Confidence            22 4444445552223345566666664

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.92  E-value=0.0039  Score=54.11  Aligned_cols=38  Identities=11%  Similarity=0.062  Sum_probs=33.6

Q ss_pred             CC-cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH
Q 023555           18 DN-KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        18 ~~-k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      .| .++||+||+|++|...++.+...|++|+.++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 999999999999999999888899999988876654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.90  E-value=0.0026  Score=55.71  Aligned_cols=81  Identities=17%  Similarity=0.227  Sum_probs=54.2

Q ss_pred             CCCcEEEEec-CCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTG-ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG-~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..|.++||.| |+|++|...++.+...|++|+.+++++++++.+. ++    +.  .. .  .|.. +.+ ..+.+.++.
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga--~~-~--~~~~-~~~-~~~~v~~~t  236 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ----GA--VH-V--CNAA-SPT-FMQDLTEAL  236 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT----TC--SC-E--EETT-STT-HHHHHHHHH
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC----CC--cE-E--EeCC-ChH-HHHHHHHHh
Confidence            3578999997 9999999999999889999999999988776543 22    21  11 1  2333 222 222222222


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      .. .++|++|.++|.
T Consensus       237 ~~-~g~d~v~d~~g~  250 (379)
T 3iup_A          237 VS-TGATIAFDATGG  250 (379)
T ss_dssp             HH-HCCCEEEESCEE
T ss_pred             cC-CCceEEEECCCc
Confidence            11 279999999985

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.89  E-value=0.017  Score=49.30  Aligned_cols=115  Identities=14%  Similarity=0.218  Sum_probs=72.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .+|.|+|+ |.+|.+++..|+..+.  .+++.|.++++++....++.........+... .|   +           .+.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~---~-----------~~a   69 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG---E-----------YSD   69 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC---C-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC---C-----------HHH
Confidence            58999998 9999999999999887  79999999988887777776542111111111 12   1           122


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +...|++|..+|.....    ..+..+   .+..|    ..+++.+.+.+.+..+.+.+|++|.
T Consensus        70 ~~~aDvVii~ag~~~~~----g~~R~d---l~~~n----~~i~~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           70 CKDADLVVITAGAPQKP----GESRLD---LVNKN----LNILSSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             GTTCSEEEECCCC-----------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hCCCCEEEECCCCCCCC----CCCHHH---HHHHH----HHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            45889999999874211    122222   23333    3455666666666666788888765

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.87  E-value=0.0021  Score=51.23  Aligned_cols=43  Identities=30%  Similarity=0.500  Sum_probs=37.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      +++|+||+|.+|.++++.|++.|++|.+++|++++.+.+.+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999988777665543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.86  E-value=0.0035  Score=54.66  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=53.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++    +.  ..   ..|..+..+++.+.+.++.
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga--~~---vi~~~~~~~~~~~~v~~~~  257 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF----GA--TE---CINPQDFSKPIQEVLIEMT  257 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH----TC--SE---EECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc----CC--ce---EeccccccccHHHHHHHHh
Confidence            35889999996 9999999998888999 7999999988876543 33    11  11   1233310122333333332


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      .  +++|++|.++|.
T Consensus       258 ~--~g~D~vid~~g~  270 (373)
T 2fzw_A          258 D--GGVDYSFECIGN  270 (373)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCCEEEECCCc
Confidence            2  479999999874

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.85  E-value=0.00082  Score=55.51  Aligned_cols=43  Identities=30%  Similarity=0.468  Sum_probs=37.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLC   60 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~   60 (280)
                      .+++ +++|.|+ ||.|++++..|.+.|+ +|++++|+.++++++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4678 8999987 8999999999999999 8999999988766543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.84  E-value=0.015  Score=49.49  Aligned_cols=113  Identities=15%  Similarity=0.234  Sum_probs=70.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhc---CCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQS---GSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++.|+|+ |.+|.+++..|+..|.  .|+++++++++++....+++...   +...++.  ..|..              
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~--~~~~~--------------   64 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVT--GTNDY--------------   64 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEE--EESSS--------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEE--ECCCH--------------
Confidence            5788996 9999999999999987  89999999887766555565421   1111221  11211              


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +.+...|++|..+|....   + .++..   +.++.|.    .+++.+.+.+.+..+.+.++++|.
T Consensus        65 ~a~~~aDvVii~ag~~~k---p-G~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           65 GPTEDSDVCIITAGLPRS---P-GMSRD---DLLAKNT----EIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             GGGTTCSEEEECCCC-----------CH---HHHHHHH----HHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             HHhCCCCEEEECCCCCCC---C-CCCHH---HHHHhhH----HHHHHHHHHHHHhCCCcEEEecCC
Confidence            233478999999987421   1 22222   3344444    445666666666666778888875

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.83  E-value=0.0011  Score=57.59  Aligned_cols=47  Identities=19%  Similarity=0.371  Sum_probs=41.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      +++||+++|.|. |.+|+.+|+.|.+.|++|++.+++.+++++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            699999999997 88999999999999999999999988777766554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.83  E-value=0.0029  Score=55.23  Aligned_cols=80  Identities=19%  Similarity=0.297  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|+++||+|+ |++|..+++.+...|+ +|+.+++++++++.+. ++    +.  ..   ..|..+..+++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga--~~---vi~~~~~~~~~~~~~~~~~~  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV----GA--TE---CVNPQDYKKPIQEVLTEMSN  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TC--SE---EECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CC--ce---EecccccchhHHHHHHHHhC
Confidence            5889999995 9999999999888999 7999999988876542 22    21  11   12333101223333333322


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                        +++|++|.++|.
T Consensus       260 --~g~D~vid~~g~  271 (374)
T 2jhf_A          260 --GGVDFSFEVIGR  271 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCcEEEECCCC
Confidence              479999999974

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.82  E-value=0.012  Score=51.36  Aligned_cols=85  Identities=18%  Similarity=0.214  Sum_probs=57.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEecc-------CC---CHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDV-------SA---NGAA   86 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~~---~~~~   86 (280)
                      +.+++++|.|+ |.+|..+++.+...|++|++++++.++++.+.+ +    +    ..++..|+       ..   ..+.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l----G----a~~~~l~~~~~~~~gya~~~~~~~  251 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V----G----AQWLDLGIDAAGEGGYARELSEAE  251 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T----T----CEECCCC-------------CHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----C----CeEEeccccccccccchhhhhHHH
Confidence            57899999999 799999999999999999999999988776543 2    1    11122110       00   0112


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCC
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                      .....+.+.+.....|++|+++...
T Consensus       252 ~~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          252 RAQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             HhhhHHHHHHHHhcCCEEEECCCCC
Confidence            2233344445556899999987654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.82  E-value=0.0065  Score=52.10  Aligned_cols=93  Identities=16%  Similarity=0.173  Sum_probs=59.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcceEE
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRAMA   75 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   75 (280)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+.+.++ .+++..
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP-~v~v~~  108 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP-LMDATG  108 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCT-TCEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCC-CCEEEE
Confidence            678999999998 8999999999999999 588887743                   466777777766654 455555


Q ss_pred             EEeccC------CCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 023555           76 VELDVS------ANGAAIENSVQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        76 ~~~D~~------~~~~~~~~~~~~~~~~~g~id~li~~ag~  110 (280)
                      +..++.      .+.+....-.+.+.+.+...|+||++...
T Consensus       109 ~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn  149 (340)
T 3rui_A          109 VKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  149 (340)
T ss_dssp             ECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             EeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence            554431      01110011111122223367999988754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.82  E-value=0.002  Score=53.64  Aligned_cols=43  Identities=19%  Similarity=0.342  Sum_probs=39.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++++++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 99999999999999999999999999988877 54

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.82  E-value=0.0042  Score=54.81  Aligned_cols=43  Identities=21%  Similarity=0.148  Sum_probs=38.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++++.+.++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467999999997 8999999999999999999999998877664

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.82  E-value=0.0024  Score=55.46  Aligned_cols=75  Identities=17%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++++.+. ++    +.  ..   ..|.. +.++   ..+.+.  
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l----Ga--~~---v~~~~-~~~~---~~~~~~--  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM----GA--DH---YIATL-EEGD---WGEKYF--  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH----TC--SE---EEEGG-GTSC---HHHHSC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc----CC--CE---EEcCc-CchH---HHHHhh--
Confidence            5899999999 99999999988889999999999988776543 23    11  11   12333 2101   122221  


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                       +++|++|.++|.
T Consensus       242 -~~~D~vid~~g~  253 (360)
T 1piw_A          242 -DTFDLIVVCASS  253 (360)
T ss_dssp             -SCEEEEEECCSC
T ss_pred             -cCCCEEEECCCC
Confidence             589999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.81  E-value=0.0037  Score=54.58  Aligned_cols=80  Identities=18%  Similarity=0.253  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|++|||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++    +.  ..   ..|..+..+++.+.+.++..
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga--~~---vi~~~~~~~~~~~~v~~~~~  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL----GA--TD---CLNPRELDKPVQDVITELTA  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TC--SE---EECGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CC--cE---EEccccccchHHHHHHHHhC
Confidence            5889999996 9999999998888999 7999999988876542 32    21  11   12333101123333333322


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                        +.+|++|.++|.
T Consensus       264 --~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 --GGVDYSLDCAGT  275 (376)
T ss_dssp             --SCBSEEEESSCC
T ss_pred             --CCccEEEECCCC
Confidence              479999999974

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.80  E-value=0.0044  Score=53.78  Aligned_cols=79  Identities=16%  Similarity=0.187  Sum_probs=53.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.++||+|+ |++|...++.+... |++|+.+++++++++.+. ++    +.  ..   ..|.. + + +.+.+.++.
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga--~~---vi~~~-~-~-~~~~v~~~~  250 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL----GA--DH---VVDAR-R-D-PVKQVMELT  250 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT----TC--SE---EEETT-S-C-HHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh----CC--CE---EEecc-c-h-HHHHHHHHh
Confidence            35899999999 89999999988888 999999999988776543 32    21  11   13444 2 2 333333321


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      . ..++|++|.++|.
T Consensus       251 ~-g~g~Dvvid~~G~  264 (359)
T 1h2b_A          251 R-GRGVNVAMDFVGS  264 (359)
T ss_dssp             T-TCCEEEEEESSCC
T ss_pred             C-CCCCcEEEECCCC
Confidence            1 1269999999974

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.80  E-value=0.011  Score=51.00  Aligned_cols=81  Identities=22%  Similarity=0.298  Sum_probs=52.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCC-CHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSA-NGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~   94 (280)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++    +.  . ..  .|... +.++..+.+.+.
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga--~-~v--i~~~~~~~~~~~~~i~~~  238 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI----GA--D-LV--LQISKESPQEIARKVEGQ  238 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----TC--S-EE--EECSSCCHHHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----CC--C-EE--EcCcccccchHHHHHHHH
Confidence            35889999996 8999999998888999 8999999987766542 22    21  1 11  22220 112222222222


Q ss_pred             HHHcCCccEEEECCCC
Q 023555           95 WEAFGRIDALVNNAGV  110 (280)
Q Consensus        95 ~~~~g~id~li~~ag~  110 (280)
                      ..  +++|++|.++|.
T Consensus       239 ~~--~g~D~vid~~g~  252 (356)
T 1pl8_A          239 LG--CKPEVTIECTGA  252 (356)
T ss_dssp             HT--SCCSEEEECSCC
T ss_pred             hC--CCCCEEEECCCC
Confidence            21  479999999874

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.78  E-value=0.0028  Score=58.34  Aligned_cols=92  Identities=16%  Similarity=0.169  Sum_probs=61.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcceEE
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRAMA   75 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   75 (280)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+.+.++ .+++..
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP-~V~v~~  400 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP-LMDATG  400 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT-TCEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC-CcEEEE
Confidence            678999999998 8999999999999999 588988753                   466777777766654 456666


Q ss_pred             EEecc-------CCCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 023555           76 VELDV-------SANGAAIENSVQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        76 ~~~D~-------~~~~~~~~~~~~~~~~~~g~id~li~~ag~  110 (280)
                      +..++       + +.+....-.+.+.+.+...|+||.+...
T Consensus       401 ~~~~Ipm~gh~v~-~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          401 VKLSIPMIGHKLV-NEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             ECCCCCCTTCCCS-CHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eeccccccCcccc-chhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            55443       1 1111111111222223368999988754

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.76  E-value=0.0021  Score=56.18  Aligned_cols=80  Identities=15%  Similarity=0.204  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|.+|||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++    +.  ..   ..|..+..+++.+.+.++. 
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga--~~---vi~~~~~~~~~~~~i~~~~-  260 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF----GV--NE---FVNPKDHDKPIQEVIVDLT-  260 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT----TC--CE---EECGGGCSSCHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----CC--cE---EEccccCchhHHHHHHHhc-
Confidence            5889999998 9999999999989999 799999998887743 222    21  11   1233211122333333332 


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                       .+++|++|.++|.
T Consensus       261 -~gg~D~vid~~g~  273 (378)
T 3uko_A          261 -DGGVDYSFECIGN  273 (378)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             2379999999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.76  E-value=0.0024  Score=55.56  Aligned_cols=78  Identities=14%  Similarity=0.255  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHH-hCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|+++||+||+|++|...++.+.. .|++|+.+++++++++.+. ++    +.  ..   ..|.. +  +..+.+.++  
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l----Ga--d~---vi~~~-~--~~~~~v~~~--  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL----GA--HH---VIDHS-K--PLAAEVAAL--  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT----TC--SE---EECTT-S--CHHHHHHTT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc----CC--CE---EEeCC-C--CHHHHHHHh--
Confidence            689999999999999998876665 4889999999988776543 22    21  11   12333 1  122222222  


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      ..+++|+++.++|.
T Consensus       236 ~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 GLGAPAFVFSTTHT  249 (363)
T ss_dssp             CSCCEEEEEECSCH
T ss_pred             cCCCceEEEECCCc
Confidence            23479999999874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.75  E-value=0.007  Score=52.92  Aligned_cols=81  Identities=20%  Similarity=0.224  Sum_probs=53.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|+++||+| +|++|...++.+...| ++|+.+++++++++.+. ++    +.  .. .+..+.+ +.+++   .+++.
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga--~~-vi~~~~~-~~~~~---~~~v~  260 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI----GA--DL-TLNRRET-SVEER---RKAIM  260 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT----TC--SE-EEETTTS-CHHHH---HHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc----CC--cE-EEecccc-CcchH---HHHHH
Confidence            3589999999 8999999999888899 59999999988776543 22    21  11 1222111 12333   33333


Q ss_pred             HHc-C-CccEEEECCCC
Q 023555           96 EAF-G-RIDALVNNAGV  110 (280)
Q Consensus        96 ~~~-g-~id~li~~ag~  110 (280)
                      +.. + ++|++|.++|.
T Consensus       261 ~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          261 DITHGRGADFILEATGD  277 (380)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HHhCCCCCcEEEECCCC
Confidence            332 2 69999999984

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.75  E-value=0.0051  Score=53.62  Aligned_cols=74  Identities=19%  Similarity=0.220  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|.++||+|+ |++|...++.+...|++|+.+++++++++.+. ++    +.  ..   ..|.. +.+.    ++++.  
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l----Ga--~~---vi~~~-~~~~----~~~~~--  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL----GA--DE---VVNSR-NADE----MAAHL--  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH----TC--SE---EEETT-CHHH----HHTTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC--cE---Eeccc-cHHH----HHHhh--
Confidence            5899999997 89999999988889999999999988877543 33    11  11   13444 3222    22221  


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                       +++|++|.++|.
T Consensus       256 -~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 -KSFDFILNTVAA  267 (369)
T ss_dssp             -TCEEEEEECCSS
T ss_pred             -cCCCEEEECCCC
Confidence             589999999985

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.71  E-value=0.0022  Score=52.03  Aligned_cols=72  Identities=21%  Similarity=0.135  Sum_probs=51.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+.    .      .+.++.+|.+ +.+.++++      ..
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~------~~~~i~gd~~-~~~~l~~a------~i   69 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR----S------GANFVHGDPT-RVSDLEKA------NV   69 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----T------TCEEEESCTT-CHHHHHHT------TC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----c------CCeEEEcCCC-CHHHHHhc------Cc
Confidence            457888887 8999999999999999 999999987765442    1      3566788887 54333322      12


Q ss_pred             CCccEEEECCC
Q 023555           99 GRIDALVNNAG  109 (280)
Q Consensus        99 g~id~li~~ag  109 (280)
                      .+.|.+|...+
T Consensus        70 ~~ad~vi~~~~   80 (234)
T 2aef_A           70 RGARAVIVDLE   80 (234)
T ss_dssp             TTCSEEEECCS
T ss_pred             chhcEEEEcCC
Confidence            36788887653

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.70  E-value=0.062  Score=45.68  Aligned_cols=117  Identities=15%  Similarity=0.129  Sum_probs=71.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCC-cceEEEEeccCCCHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSS-VRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +.+++.|+|+ |.+|.+++..++..|.  .|+++|++++.++.....+....... ..+... .|   +.          
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~---~~----------   69 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG---DY----------   69 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC---CG----------
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC---cH----------
Confidence            3468999998 9999999999998885  79999999876665555555432110 011111 11   11          


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                       +.+...|++|..++.....+    .+..+   .+..|    ..+.+.+.+.+.+..+.+.++++|.
T Consensus        70 -~al~~aDvViia~~~~~~~g----~~r~d---l~~~n----~~i~~~i~~~i~~~~p~a~~iv~tN  124 (316)
T 1ldn_A           70 -DDCRDADLVVICAGANQKPG----ETRLD---LVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (316)
T ss_dssp             -GGTTTCSEEEECCSCCCCTT----TCSGG---GHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             -HHhCCCCEEEEcCCCCCCCC----CCHHH---HHHcC----hHHHHHHHHHHHHHCCCCEEEEeCC
Confidence             12347899999998753221    22222   23333    3455666666666554566666654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.69  E-value=0.0033  Score=54.48  Aligned_cols=76  Identities=21%  Similarity=0.361  Sum_probs=51.6

Q ss_pred             CCCcEEEEecCCChhHHHH-HHHH-HHhCCe-EEEEecChh---HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREF-CLDL-AKAGCR-IVAAARRVD---RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~-a~~l-~~~G~~-v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ++++++||+|+ |++|... ++.+ ...|++ |+.++++++   +++.+ +++    +    ...+  |.. + +++.+ 
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l----G----a~~v--~~~-~-~~~~~-  235 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL----D----ATYV--DSR-Q-TPVED-  235 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT----T----CEEE--ETT-T-SCGGG-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc----C----Cccc--CCC-c-cCHHH-
Confidence            34499999999 9999999 8777 678997 999999887   66543 232    1    2222  443 2 22233 


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~  110 (280)
                      +.++   .+++|++|.++|.
T Consensus       236 i~~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          236 VPDV---YEQMDFIYEATGF  252 (357)
T ss_dssp             HHHH---SCCEEEEEECSCC
T ss_pred             HHHh---CCCCCEEEECCCC
Confidence            3333   2489999999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.69  E-value=0.0071  Score=52.68  Aligned_cols=79  Identities=13%  Similarity=0.116  Sum_probs=52.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|+++||+|++|++|...++.+...|++|+.+. ++++++ ..+++    +.  ..   ..|.. + +++.+.+.++. 
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l----Ga--~~---vi~~~-~-~~~~~~v~~~t-  228 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR----GA--EE---VFDYR-A-PNLAQTIRTYT-  228 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT----TC--SE---EEETT-S-TTHHHHHHHHT-
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc----CC--cE---EEECC-C-chHHHHHHHHc-
Confidence            4689999999999999999999999999998886 566655 33332    21  11   12333 2 22222222221 


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                       .+++|+++.++|.
T Consensus       229 -~g~~d~v~d~~g~  241 (371)
T 3gqv_A          229 -KNNLRYALDCITN  241 (371)
T ss_dssp             -TTCCCEEEESSCS
T ss_pred             -cCCccEEEECCCc
Confidence             2469999999985

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.64  E-value=0.0047  Score=53.84  Aligned_cols=80  Identities=23%  Similarity=0.315  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|++|||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++    +.  ..   ..|..+..+++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga--~~---vi~~~~~~~~~~~~i~~~t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL----GA--TE---CLNPKDYDKPIYEVICEKTN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT----TC--SE---EECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc----CC--cE---EEecccccchHHHHHHHHhC
Confidence            5889999995 9999999998888899 7999999988776543 32    21  11   12332101123333333222


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                        +++|++|.++|.
T Consensus       260 --gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 --GGVDYAVECAGR  271 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999874

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.64  E-value=0.019  Score=48.95  Aligned_cols=116  Identities=17%  Similarity=0.167  Sum_probs=66.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ..+|.|+|+ |.+|.+++..|+..|.  .|+++|.++++++....++.+.......+. +..  . +           .+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~-i~~--~-~-----------~~   70 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMS-LYA--G-D-----------YS   70 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEE-EC-----C-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeE-EEE--C-C-----------HH
Confidence            357889998 9999999999999987  899999998776655566644321110111 111  1 1           12


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      .+...|++|..+|...  .+  ..+.++   .+..|+.-.    +.+.+.+.+..+.+.+|++|.
T Consensus        71 a~~~aDvVii~~g~p~--k~--g~~r~d---l~~~n~~i~----~~i~~~i~~~~p~a~viv~tN  124 (318)
T 1y6j_A           71 DVKDCDVIVVTAGANR--KP--GETRLD---LAKKNVMIA----KEVTQNIMKYYNHGVILVVSN  124 (318)
T ss_dssp             GGTTCSEEEECCCC----------CHHH---HHHHHHHHH----HHHHHHHHHHCCSCEEEECSS
T ss_pred             HhCCCCEEEEcCCCCC--CC--CcCHHH---HHHhhHHHH----HHHHHHHHHhCCCcEEEEecC
Confidence            2458999999998742  11  223333   345555444    444445554444677777654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.63  E-value=0.071  Score=44.79  Aligned_cols=115  Identities=13%  Similarity=0.133  Sum_probs=73.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCC-CcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGS-SVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|.|+|+ |+||.++|..|..+|.  +++|+|.+++.++-...++...... .........   ++.+           .
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~---~d~~-----------~   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG---ADYS-----------L   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE---SCGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC---CCHH-----------H
Confidence            4778895 9999999999999876  6999999987776666666543210 111111211   1211           1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +..-|++|-.||....   + .++.+++   ++.|..    +++.+.+.+.+..+.+.++.+|.
T Consensus        67 ~~~aDvVvitAG~prk---p-GmtR~dL---l~~Na~----I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARK---P-GMTRLDL---AHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             GTTCSEEEECCCCCCC---S-SSCHHHH---HHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             hCCCCEEEEecCCCCC---C-CCchHHH---HHHHHH----HHHHHHHHHHhcCCceEEEEecC
Confidence            3478999999997522   2 4566554   445544    55666666666665677777765

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.62  E-value=0.03  Score=47.34  Aligned_cols=114  Identities=15%  Similarity=0.194  Sum_probs=63.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|+|+ |.+|.+++..|+..|.  +|+++++++++++....++............ ..  . +.           +.+
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i-~~--~-~~-----------~a~   65 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRV-WH--G-GH-----------SEL   65 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEE-EE--E-CG-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEE-EE--C-CH-----------HHh
Confidence            6889998 9999999999999998  8999999988776555555432210001111 11  1 11           123


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ...|++|..++.....    ..+..   +.+..|..    +.+.+.+.+.+..+.+.+|++|.
T Consensus        66 ~~aDvVIi~~~~~~~~----g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~~~vi~~tN  117 (304)
T 2v6b_A           66 ADAQVVILTAGANQKP----GESRL---DLLEKNAD----IFRELVPQITRAAPDAVLLVTSN  117 (304)
T ss_dssp             TTCSEEEECC-------------------CHHHHHH----HHHHHHHHHHHHCSSSEEEECSS
T ss_pred             CCCCEEEEcCCCCCCC----CCcHH---HHHHhHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            4789999999864211    12222   23344444    34444444544344566666554

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.62  E-value=0.04  Score=46.69  Aligned_cols=147  Identities=14%  Similarity=0.201  Sum_probs=85.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhh---cCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQ---SGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++.|+|+ |.+|.+++..++..|. .|++.|+++++++....++...   .+...++... .|.               +
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---------------~   63 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NSY---------------E   63 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---------------G
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CCH---------------H
Confidence            3678998 9999999999999888 6999999988877666666543   1112222211 111               1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc------CCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS------RGQL  170 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~------~~~~  170 (280)
                      .+...|++|..+|....  +  .++.+++   +..    ...+.+.+.+.+.+..+.+.+|++|.-....      ..++
T Consensus        64 a~~~aD~Vi~~ag~~~k--~--G~~r~dl---~~~----n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~~~~  132 (308)
T 2d4a_B           64 DMRGSDIVLVTAGIGRK--P--GMTREQL---LEA----NANTMADLAEKIKAYAKDAIVVITTNPVDAMTYVMYKKTGF  132 (308)
T ss_dssp             GGTTCSEEEECCSCCCC--S--SCCTHHH---HHH----HHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCC
T ss_pred             HhCCCCEEEEeCCCCCC--C--CCcHHHH---HHH----HHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHhcCC
Confidence            23478999999987422  1  2333332   233    3445566666666655567888876522110      0122


Q ss_pred             CCCCCChh-hHHHHHHHHHHHHHHhC
Q 023555          171 PGGVAYAS-SKAGLNAMTKCLSLELG  195 (280)
Q Consensus       171 ~~~~~Y~~-sK~a~~~l~~~la~~~~  195 (280)
                      |..-..+. .-.-...+-..+|..+.
T Consensus       133 p~~rviG~gt~LD~~R~~~~la~~lg  158 (308)
T 2d4a_B          133 PRERVIGFSGILDSARMAYYISQKLG  158 (308)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             ChhhEEEecccchHHHHHHHHHHHhC
Confidence            32233343 22234455666666664

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.59  E-value=0.0094  Score=51.28  Aligned_cols=77  Identities=21%  Similarity=0.189  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .|+++||+|+ |++|...++.+...  |++|+.+++++++++.+. ++    +.  ..   ..|.. +  . +..++++.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga--~~---vi~~~-~--~-~~~~~~~~  234 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL----GA--DY---VSEMK-D--A-ESLINKLT  234 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH----TC--SE---EECHH-H--H-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh----CC--CE---Eeccc-c--c-hHHHHHhh
Confidence            7899999999 89999999988888  999999999988776543 33    11  11   12222 1  0 12233332


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      + ..++|++|.++|.
T Consensus       235 ~-g~g~D~vid~~g~  248 (344)
T 2h6e_A          235 D-GLGASIAIDLVGT  248 (344)
T ss_dssp             T-TCCEEEEEESSCC
T ss_pred             c-CCCccEEEECCCC
Confidence            2 2379999999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.57  E-value=0.0056  Score=54.03  Aligned_cols=78  Identities=17%  Similarity=0.221  Sum_probs=52.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++    +.  ..   ..|.. +.+    +.+.+.
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l----Ga--~~---vi~~~-~~~----~~~~i~  275 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL----GA--DH---VIDPT-KEN----FVEAVL  275 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH----TC--SE---EECTT-TSC----HHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc----CC--CE---EEcCC-CCC----HHHHHH
Confidence            45889999998 8999999998888999 899999998777644 333    21  11   12333 211    223333


Q ss_pred             HHc--CCccEEEECCCC
Q 023555           96 EAF--GRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~--g~id~li~~ag~  110 (280)
                      +..  .++|++|.++|.
T Consensus       276 ~~t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          276 DYTNGLGAKLFLEATGV  292 (404)
T ss_dssp             HHTTTCCCSEEEECSSC
T ss_pred             HHhCCCCCCEEEECCCC
Confidence            322  269999999974

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.54  E-value=0.0033  Score=54.82  Aligned_cols=78  Identities=22%  Similarity=0.334  Sum_probs=52.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+++++++.+. .+++    +.  .   ...|.+ +. +   ..+.+.
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l----Ga--~---~vi~~~-~~-~---~~~~i~  244 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV----GA--T---ATVDPS-AG-D---VVEAIA  244 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH----TC--S---EEECTT-SS-C---HHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc----CC--C---EEECCC-Cc-C---HHHHHH
Confidence            35899999998 8999999998888999 78999998877664 3333    11  1   123443 21 1   222232


Q ss_pred             H----HcCCccEEEECCCC
Q 023555           96 E----AFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~----~~g~id~li~~ag~  110 (280)
                      +    ..+++|++|.++|.
T Consensus       245 ~~~~~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          245 GPVGLVPGGVDVVIECAGV  263 (370)
T ss_dssp             STTSSSTTCEEEEEECSCC
T ss_pred             hhhhccCCCCCEEEECCCC
Confidence            2    12479999999874

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.53  E-value=0.082  Score=44.94  Aligned_cols=114  Identities=17%  Similarity=0.174  Sum_probs=67.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|.|+ |.+|.+++..|++.|.  +|++++++++.++.....+........... +..  + +.+           ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~-i~~--~-d~~-----------~~   65 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRAN-IYA--G-DYA-----------DL   65 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCE-EEE--C-CGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcE-EEe--C-CHH-----------Hh
Confidence            5789998 9999999999999999  999999998877776555433211000011 111  1 111           12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ...|++|.+++.....    ..+..+   .+..|..    +.+.+.+.+.+..+.+.+|+++.
T Consensus        66 ~~aDvViiav~~~~~~----g~~r~d---l~~~n~~----i~~~i~~~i~~~~~~~~ii~~tN  117 (319)
T 1a5z_A           66 KGSDVVIVAAGVPQKP----GETRLQ---LLGRNAR----VMKEIARNVSKYAPDSIVIVVTN  117 (319)
T ss_dssp             TTCSEEEECCCCCCCS----SCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCCEEEEccCCCCCC----CCCHHH---HHHHHHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence            3789999999864211    223222   2333333    34444455544334567777654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.51  E-value=0.0037  Score=54.20  Aligned_cols=75  Identities=13%  Similarity=0.116  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|.++||+|+ |++|...++.+...|++|+.+++++++++.+.+++    +.. .+    .|.. +.+.       +.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l----Ga~-~v----i~~~-~~~~-------~~~~  241 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL----GAD-DY----VIGS-DQAK-------MSEL  241 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS----CCS-CE----EETT-CHHH-------HHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc----CCc-ee----eccc-cHHH-------HHHh
Confidence            6899999995 99999999988889999999999987766543222    211 11    2333 3222       1222


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .+++|++|.++|.
T Consensus       242 ~~g~D~vid~~g~  254 (357)
T 2cf5_A          242 ADSLDYVIDTVPV  254 (357)
T ss_dssp             TTTEEEEEECCCS
T ss_pred             cCCCCEEEECCCC
Confidence            3479999999985

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.50  E-value=0.038  Score=46.82  Aligned_cols=114  Identities=17%  Similarity=0.173  Sum_probs=66.9

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhc---CCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQS---GSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++|.|+|+ |.+|..++..|+..|. +|+++++++++++....++.+..   ....++.. ..|.               
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d~---------------   65 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNNY---------------   65 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESCG---------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-CCCH---------------
Confidence            47899998 9999999999999997 89999999887776555554421   11112221 1111               


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +.+...|++|..+|.....    ..+..+   .+..|    ..+.+.+.+.+.+....+.++++|.
T Consensus        66 ~a~~~aD~Vi~a~g~p~~~----g~~r~d---l~~~n----~~i~~~i~~~i~~~~p~a~vi~~tN  120 (309)
T 1ur5_A           66 ADTANSDVIVVTSGAPRKP----GMSRED---LIKVN----ADITRACISQAAPLSPNAVIIMVNN  120 (309)
T ss_dssp             GGGTTCSEEEECCCC------------CH---HHHHH----HHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred             HHHCCCCEEEEcCCCCCCC----CCCHHH---HHHHH----HHHHHHHHHHHHhhCCCeEEEEcCC
Confidence            1134789999999874211    112111   22233    3345566666666554455555543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.49  E-value=0.015  Score=51.08  Aligned_cols=43  Identities=16%  Similarity=0.186  Sum_probs=38.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      +.+.+|+|.|+ |.+|..+++.+...|++|+++++++.+++.+.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            57889999999 79999999999999999999999988776654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.49  E-value=0.005  Score=52.47  Aligned_cols=75  Identities=13%  Similarity=0.249  Sum_probs=49.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|.++||+||+|++|...++.+...|++|+.+++++ +. +..+++    +.  ..   ..|.. +.+...       +
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l----Ga--~~---~i~~~-~~~~~~-------~  211 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL----GA--EQ---CINYH-EEDFLL-------A  211 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH----TC--SE---EEETT-TSCHHH-------H
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc----CC--CE---EEeCC-Ccchhh-------h
Confidence            4689999999999999999999999999999888543 33 333333    21  11   12333 211111       1


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      ...++|+++.++|.
T Consensus       212 ~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          212 ISTPVDAVIDLVGG  225 (321)
T ss_dssp             CCSCEEEEEESSCH
T ss_pred             hccCCCEEEECCCc
Confidence            12579999999873

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.46  E-value=0.032  Score=50.19  Aligned_cols=165  Identities=12%  Similarity=0.084  Sum_probs=91.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHh-----CCeEEEEecChhHHHHHHHHHHh---hcCCCcceEEEEeccCCCHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKA-----GCRIVAAARRVDRLKSLCDEINK---QSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~-----G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      |+.++|.|.||++..|.+++..|+.+     +..|++.++++++++...+....   ..+...++.. .   + +   .+
T Consensus        26 m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~-t---~-D---~~   97 (472)
T 1u8x_X           26 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-T---T-D---PE   97 (472)
T ss_dssp             CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-E---S-C---HH
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEE-E---C-C---HH
Confidence            44668999999888888899889988     66799999999877664332211   1122222221 1   1 2   12


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhh----------------hhHHHHHHHHHHHHHHhcCC
Q 023555           89 NSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN----------------LTGSWLVSKYVCIRMRDANQ  152 (280)
Q Consensus        89 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~~~~~~~~~~  152 (280)
                      +.+       ...|+||..++....       .....++.+..+                ...++-+++.+.+.+.+..+
T Consensus        98 eal-------~~AD~VViaag~~~~-------~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P  163 (472)
T 1u8x_X           98 EAF-------TDVDFVMAHIRVGKY-------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP  163 (472)
T ss_dssp             HHH-------SSCSEEEECCCTTHH-------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHH-------cCCCEEEEcCCCccc-------cccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCC
Confidence            222       378999999986311       011111121111                23344567777788887776


Q ss_pred             CCeEEEEeccccccC----CCCCCCCCChhhHHHHHHHHHHHHHHhCC---CCeEEEEe
Q 023555          153 EGSVINISSIAATSR----GQLPGGVAYASSKAGLNAMTKCLSLELGV---HKIRVNSI  204 (280)
Q Consensus       153 ~g~vv~vsS~~~~~~----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~---~gi~vn~v  204 (280)
                      .+.+|++|.-.....    ...|..-..+..- .+..|-+.+|..+.-   +.|.+..+
T Consensus       164 ~A~ii~~TNPvdi~T~~~~k~~p~~rViG~c~-~~~r~~~~la~~lgv~~~~~v~~~v~  221 (472)
T 1u8x_X          164 DAWMLNYSNPAAIVAEATRRLRPNSKILNICD-MPVGIEDRMAQILGLSSRKEMKVRYY  221 (472)
T ss_dssp             TCEEEECCSCHHHHHHHHHHHSTTCCEEECCS-HHHHHHHHHHHHHTCSCGGGEEEEEE
T ss_pred             CeEEEEeCCcHHHHHHHHHHhCCCCCEEEeCC-cHHHHHHHHHHHhCcCchhceeEEEe
Confidence            778887775332210    0012211222211 245777788887752   45555433

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.43  E-value=0.014  Score=51.32  Aligned_cols=80  Identities=21%  Similarity=0.351  Sum_probs=51.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++    +  .  ..  .|.. +.+...+.+.++.
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----G--a--~~--i~~~-~~~~~~~~~~~~~  250 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA----G--F--ET--IDLR-NSAPLRDQIDQIL  250 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT----T--C--EE--EETT-SSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc----C--C--cE--EcCC-CcchHHHHHHHHh
Confidence            35899999996 9999999998888899 8999999988776432 22    2  1  22  3433 2111011222211


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      . ..++|++|.++|.
T Consensus       251 ~-g~g~Dvvid~~g~  264 (398)
T 2dph_A          251 G-KPEVDCGVDAVGF  264 (398)
T ss_dssp             S-SSCEEEEEECSCT
T ss_pred             C-CCCCCEEEECCCC
Confidence            1 1269999999985

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.41  E-value=0.13  Score=44.75  Aligned_cols=123  Identities=12%  Similarity=0.146  Sum_probs=71.8

Q ss_pred             cCCCC-CcEEEEecCCChhHHHHHHHHHHhCC--e---EEEEec----ChhHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 023555           14 WCQLD-NKVVMVTGASSGLGREFCLDLAKAGC--R---IVAAAR----RVDRLKSLCDEINKQSGSSVRAMAVELDVSAN   83 (280)
Q Consensus        14 ~~~l~-~k~vlItG~~~giG~a~a~~l~~~G~--~---v~l~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (280)
                      ...++ ..+|.|+||+|.||.+++-.++..+.  .   +++.+.    +++.++-...+++......  ..  ...+..+
T Consensus        26 ~~~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~--~~--~v~i~~~  101 (375)
T 7mdh_A           26 TKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL--LR--EVSIGID  101 (375)
T ss_dssp             ---CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--EE--EEEEESC
T ss_pred             HhhCCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh--cC--CcEEecC
Confidence            33443 56899999999999999999998765  2   666544    3444666666665432111  11  1111211


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEec
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-NQEGSVINISS  161 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~g~vv~vsS  161 (280)
                      .          .+.+...|++|..+|...  + + .++..+   .++.|.    .+++...+.+.+. ...+.++++|.
T Consensus       102 ~----------y~~~~daDvVVitag~pr--k-p-G~tR~D---Ll~~N~----~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          102 P----------YEVFEDVDWALLIGAKPR--G-P-GMERAA---LLDING----QIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             H----------HHHTTTCSEEEECCCCCC--C-T-TCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             C----------HHHhCCCCEEEEcCCCCC--C-C-CCCHHH---HHHHHH----HHHHHHHHHHHHhcCCCeEEEEecC
Confidence            1          233458899999998742  1 1 345544   444554    4455666666653 44677887775

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.39  E-value=0.0069  Score=53.09  Aligned_cols=43  Identities=16%  Similarity=0.196  Sum_probs=38.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+.+++++|+|+ |++|+.+++.+...|++|+++++++++++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999996 8999999999999999999999998776654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.37  E-value=0.021  Score=45.51  Aligned_cols=77  Identities=8%  Similarity=0.097  Sum_probs=50.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..+..+++.|.| .|.+|.++++.|++.|++|++.+|+++       .+     ....+.++.+.    ...++.+++++
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~-----~~aD~vi~av~----~~~~~~v~~~l   77 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------AT-----TLGEIVIMAVP----YPALAALAKQY   77 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CS-----SCCSEEEECSC----HHHHHHHHHHT
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------Hh-----ccCCEEEEcCC----cHHHHHHHHHH
Confidence            367888999999 699999999999999999999999875       01     12244444442    35567777776


Q ss_pred             HHHcCCccEEEECCC
Q 023555           95 WEAFGRIDALVNNAG  109 (280)
Q Consensus        95 ~~~~g~id~li~~ag  109 (280)
                      ..... =.++|+.+.
T Consensus        78 ~~~~~-~~~vi~~~~   91 (209)
T 2raf_A           78 ATQLK-GKIVVDITN   91 (209)
T ss_dssp             HHHHT-TSEEEECCC
T ss_pred             HHhcC-CCEEEEECC
Confidence            55444 245666554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.37  E-value=0.032  Score=46.60  Aligned_cols=87  Identities=13%  Similarity=0.199  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC---eEEEEecChhHHHHHHHHHH--------hhcCCCcceEEEEeccCCCHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDRLKSLCDEIN--------KQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~---~v~l~~r~~~~~~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      +.+++.|.|+ |.+|.++++.|++.|+   +|++++|++++++.+.+++.        +.. ....++++.+    ..+.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~-~~aDvVilav----~p~~   75 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGA-LNADVVVLAV----KPHQ   75 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHH-SSCSEEEECS----CGGG
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHH-hcCCeEEEEe----CHHH
Confidence            3467888887 8999999999999998   89999999988877665320        000 1123333333    2355


Q ss_pred             HHHHHHHHHHH-cCCccEEEECCCC
Q 023555           87 IENSVQKAWEA-FGRIDALVNNAGV  110 (280)
Q Consensus        87 ~~~~~~~~~~~-~g~id~li~~ag~  110 (280)
                      ++.+++++... ..+=.++|++++.
T Consensus        76 ~~~vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           76 IKMVCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHHHHhhccCCCeEEEEecCC
Confidence            67777777654 4333377777653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.35  E-value=0.0078  Score=52.13  Aligned_cols=85  Identities=19%  Similarity=0.329  Sum_probs=61.9

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcce
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRA   73 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~   73 (280)
                      ..++++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+.+.++ .+++
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v  190 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS-EISV  190 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEE
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC-CCeE
Confidence            34678999999998 8999999999999999 688888752                   356667777766543 5677


Q ss_pred             EEEEeccCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023555           74 MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAG  109 (280)
Q Consensus        74 ~~~~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag  109 (280)
                      ..+..+++ ....+       .+ +.+.|+||.+..
T Consensus       191 ~~~~~~i~-~~~~~-------~~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          191 SEIALNIN-DYTDL-------HK-VPEADIWVVSAD  217 (353)
T ss_dssp             EEEECCCC-SGGGG-------GG-SCCCSEEEECCC
T ss_pred             EEeecccC-chhhh-------hH-hccCCEEEEecC
Confidence            77777776 32211       12 458899998764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.33  E-value=0.024  Score=47.73  Aligned_cols=79  Identities=14%  Similarity=0.136  Sum_probs=51.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .+++.|.||.|.+|.++++.|.+.|++|++++|+++. ..+   .+.     ...++++.+-.    ..+..+++++...
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~~---~~~-----~aDvVilavp~----~~~~~vl~~l~~~   88 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAES---ILA-----NADVVIVSVPI----NLTLETIERLKPY   88 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHH---HHT-----TCSEEEECSCG----GGHHHHHHHHGGG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCHHH---Hhc-----CCCEEEEeCCH----HHHHHHHHHHHhh
Confidence            4579999999999999999999999999999998653 221   121     22455554432    3366777776544


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      ..+=.+|+..++
T Consensus        89 l~~~~iv~~~~s  100 (298)
T 2pv7_A           89 LTENMLLADLTS  100 (298)
T ss_dssp             CCTTSEEEECCS
T ss_pred             cCCCcEEEECCC
Confidence            433235555544

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.30  E-value=0.0048  Score=51.42  Aligned_cols=38  Identities=26%  Similarity=0.401  Sum_probs=35.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +++||+++|.|.++-+|+.+|+.|...|++|.++.++.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            78999999999999999999999999999999887643

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.30  E-value=0.0088  Score=50.53  Aligned_cols=44  Identities=20%  Similarity=0.295  Sum_probs=38.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .++.+++++|.|+ |+||+++++.+...|++|++++|+.++.+.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~  196 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI  196 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            3689999999996 9999999999999999999999998765543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.29  E-value=0.0066  Score=52.45  Aligned_cols=78  Identities=23%  Similarity=0.227  Sum_probs=52.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++    +.  ..   ..|.. +.+    +.+++.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l----Ga--~~---vi~~~-~~~----~~~~v~  228 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY----GA--TD---IINYK-NGD----IVEQIL  228 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH----TC--CE---EECGG-GSC----HHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh----CC--ce---EEcCC-CcC----HHHHHH
Confidence            35889999985 9999999998888999 799999988776543 333    11  11   12332 211    223333


Q ss_pred             HHc--CCccEEEECCCC
Q 023555           96 EAF--GRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~--g~id~li~~ag~  110 (280)
                      +..  .++|+++.++|.
T Consensus       229 ~~t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          229 KATDGKGVDKVVIAGGD  245 (352)
T ss_dssp             HHTTTCCEEEEEECSSC
T ss_pred             HHcCCCCCCEEEECCCC
Confidence            332  269999999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.28  E-value=0.0046  Score=52.87  Aligned_cols=41  Identities=34%  Similarity=0.436  Sum_probs=36.3

Q ss_pred             Cc-EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           19 NK-VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        19 ~k-~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      ++ ++||+|++|++|..+++.+...|++|+.+++++++++.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            44 899999999999999999999999999999998776654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.26  E-value=0.054  Score=45.57  Aligned_cols=40  Identities=25%  Similarity=0.227  Sum_probs=35.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      ++|.|.|+ |.+|.++|..|++.|++|++++|+++.++...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            57888988 89999999999999999999999988776643

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.25  E-value=0.012  Score=54.07  Aligned_cols=63  Identities=19%  Similarity=0.193  Sum_probs=48.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecC-------------------hhHHHHHHHHHHhhcCCCcceE
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR-------------------VDRLKSLCDEINKQSGSSVRAM   74 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~   74 (280)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+++.+.+.+.+.++ .+++.
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP-~v~v~  400 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP-LMDAT  400 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCT-TCEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCC-CcEEE
Confidence            4678899999998 7999999999999999 58888654                   2477777777776553 45566


Q ss_pred             EEEec
Q 023555           75 AVELD   79 (280)
Q Consensus        75 ~~~~D   79 (280)
                      .+..+
T Consensus       401 ~~~~~  405 (598)
T 3vh1_A          401 GVKLS  405 (598)
T ss_dssp             EECCC
T ss_pred             EEecc
Confidence            65544

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.24  E-value=0.0039  Score=52.03  Aligned_cols=44  Identities=25%  Similarity=0.444  Sum_probs=38.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      ++++++++|.|+ |++|+++++.|.+.|++|.+++|+.++++++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            577899999996 79999999999999999999999987776654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.24  E-value=0.015  Score=51.07  Aligned_cols=79  Identities=18%  Similarity=0.252  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|++|||.|+ |++|...++.+...|+ +|+.+++++++++.+ +++    +  .  ..  .|.+++ +.+.+.+.++. 
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l----G--a--~~--i~~~~~-~~~~~~v~~~t-  250 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ----G--F--EI--ADLSLD-TPLHEQIAALL-  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT----T--C--EE--EETTSS-SCHHHHHHHHH-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc----C--C--cE--EccCCc-chHHHHHHHHh-
Confidence            5899999995 9999999988888899 689999998877654 222    2  1  22  343321 11222222221 


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      ...++|++|.++|.
T Consensus       251 ~g~g~Dvvid~~G~  264 (398)
T 1kol_A          251 GEPEVDCAVDAVGF  264 (398)
T ss_dssp             SSSCEEEEEECCCT
T ss_pred             CCCCCCEEEECCCC
Confidence            11269999999985

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.23  E-value=0.01  Score=50.00  Aligned_cols=42  Identities=24%  Similarity=0.346  Sum_probs=37.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   58 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~   58 (280)
                      ++.||+++|.|. |+||+++++.+...|++|++++|+.++.+.
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            689999999995 899999999999999999999999876544

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.23  E-value=0.001  Score=57.46  Aligned_cols=39  Identities=28%  Similarity=0.464  Sum_probs=35.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      +++||++.|.|. |.||+.+|+.+.+.|++|++.+++..+
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            689999999975 999999999999999999988887654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.22  E-value=0.021  Score=49.59  Aligned_cols=77  Identities=18%  Similarity=0.226  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +++    +.  .. .  .|.. + ++.   .+++.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga--~~-v--i~~~-~-~~~---~~~~~~  253 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL----GA--TH-V--INSK-T-QDP---VAAIKE  253 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH----TC--SE-E--EETT-T-SCH---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc----CC--CE-E--ecCC-c-cCH---HHHHHH
Confidence            5889999995 9999999998888999 599999998877654 333    11  11 1  2332 2 112   222222


Q ss_pred             H-cCCccEEEECCCC
Q 023555           97 A-FGRIDALVNNAGV  110 (280)
Q Consensus        97 ~-~g~id~li~~ag~  110 (280)
                      . .+++|++|.++|.
T Consensus       254 ~~~gg~D~vid~~g~  268 (371)
T 1f8f_A          254 ITDGGVNFALESTGS  268 (371)
T ss_dssp             HTTSCEEEEEECSCC
T ss_pred             hcCCCCcEEEECCCC
Confidence            2 2379999999874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.20  E-value=0.0071  Score=51.50  Aligned_cols=41  Identities=34%  Similarity=0.402  Sum_probs=36.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      ++ +||+|++|++|...++.+...|++|+.+++++++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            45 999999999999999999999999999999988876553

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.18  E-value=0.0049  Score=52.66  Aligned_cols=77  Identities=25%  Similarity=0.306  Sum_probs=50.0

Q ss_pred             Cc-EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NK-VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k-~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++ ++||+|++|++|..+++.+...|++|+.+++++++++.+. ++    +.  ..   .+|.. +.+  .+.+.++  .
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l----Ga--~~---~i~~~-~~~--~~~~~~~--~  213 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL----GA--KE---VLARE-DVM--AERIRPL--D  213 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT----TC--SE---EEECC------------C--C
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc----CC--cE---EEecC-CcH--HHHHHHh--c
Confidence            44 7999999999999999999899999999999987776542 22    21  11   12333 211  1222222  1


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .+++|++|.++|.
T Consensus       214 ~~~~d~vid~~g~  226 (328)
T 1xa0_A          214 KQRWAAAVDPVGG  226 (328)
T ss_dssp             SCCEEEEEECSTT
T ss_pred             CCcccEEEECCcH
Confidence            2479999999874

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.18  E-value=0.06  Score=45.72  Aligned_cols=40  Identities=13%  Similarity=0.147  Sum_probs=35.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   59 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~   59 (280)
                      .+++.|.|+ |.+|.+++..|+..|. +|++.+++++.++..
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            357889998 9999999999999998 999999998777654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.18  E-value=0.0064  Score=52.66  Aligned_cols=37  Identities=22%  Similarity=0.294  Sum_probs=32.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      .|.+|||+||+|++|...++.+...|++++.+.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5899999999999999999988888999887776543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.17  E-value=0.012  Score=52.11  Aligned_cols=40  Identities=20%  Similarity=0.300  Sum_probs=34.9

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      ..++|.|. |.+|+.+++.|.+.|..|++++++++..+.+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            45888886 88999999999999999999999998776654

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.16  E-value=0.01  Score=49.03  Aligned_cols=46  Identities=30%  Similarity=0.460  Sum_probs=40.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++++++.+++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            6788 9999997 78999999999999999999999988877776554

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.15  E-value=0.0078  Score=48.21  Aligned_cols=41  Identities=24%  Similarity=0.413  Sum_probs=34.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      ..+++.|.| +|.+|.++++.|++.|++|++++|++++.+.+
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            446789998 79999999999999999999999998766543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.15  E-value=0.092  Score=44.73  Aligned_cols=114  Identities=8%  Similarity=0.116  Sum_probs=68.9

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhh---cCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQ---SGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++|.|+|+ |.+|..++..|+..|. +|+++++++++++.....+...   .....++.. ..|.               
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~---------------   67 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNTY---------------   67 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECCG---------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-CCCH---------------
Confidence            47889998 9999999999999998 8999999988777655555432   111112221 1111               


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCC-----HHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLT-----EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +.+...|++|..+|.....    +.+     ..+   .+..    ...+.+.+.+.+.+..+.+.+|++|.
T Consensus        68 ~al~~aD~Vi~a~g~p~k~----g~~~qe~~r~d---l~~~----n~~i~~~i~~~i~~~~p~a~iiv~tN  127 (322)
T 1t2d_A           68 DDLAGADVVIVTAGFTKAP----GKSDKEWNRDD---LLPL----NNKIMIEIGGHIKKNCPNAFIIVVTN  127 (322)
T ss_dssp             GGGTTCSEEEECCSCSSCT----TCCSTTCCGGG---GHHH----HHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             HHhCCCCEEEEeCCCCCCC----CCCcccccHHH---HHHH----HHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            1234789999999864221    111     111   1222    23345555555555454667776654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.14  E-value=0.046  Score=44.99  Aligned_cols=89  Identities=17%  Similarity=0.261  Sum_probs=56.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHHHHHHHhh-cCC----CcceEEEEeccCCCHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQ-SGS----SVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~-~~~----~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +.++.|.|+ |.+|..+++.|++.|++ |.+++|++++.+.+.+.+.-. ...    -.....+..-+.  ...++.+++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~--~~~~~~v~~   86 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK--DSAFAELLQ   86 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC--HHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC--HHHHHHHHH
Confidence            457888986 99999999999999998 889999998887766542100 000    001222222222  345577777


Q ss_pred             HHHHHcCCccEEEECCCC
Q 023555           93 KAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~  110 (280)
                      ++.....+=.++|++++.
T Consensus        87 ~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           87 GIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHTTCCTTCEEEECCTT
T ss_pred             HHHhhcCCCcEEEECCCC
Confidence            765544344567777654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.06  E-value=0.027  Score=48.33  Aligned_cols=42  Identities=26%  Similarity=0.261  Sum_probs=35.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~   59 (280)
                      -.|.+++|+|+ |++|...++.+... |++|+.+++++++++.+
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~  212 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA  212 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            45899999998 99999998877777 78999999998877654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.06  E-value=0.033  Score=46.48  Aligned_cols=42  Identities=17%  Similarity=0.232  Sum_probs=37.3

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      +++.|.|++|.+|.++++.|++.|++|++++|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999999887766543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.06  E-value=0.08  Score=45.24  Aligned_cols=114  Identities=18%  Similarity=0.216  Sum_probs=67.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhh---cCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQ---SGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++.|+|+ |.+|.++|..|+..|. +|++.+++++.++.....+...   .....++.. ..|.               
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~---------------   77 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENNY---------------   77 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESCG---------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCCH---------------
Confidence            57899998 9999999999999999 9999999988777544333321   111112221 1121               


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      +.+...|++|..+|....  +  ..+..+   .+..    ...+.+.+.+.+.+..+.+.+|++|.
T Consensus        78 ~al~~aD~VI~avg~p~k--~--g~tr~d---l~~~----n~~i~~~i~~~i~~~~p~a~viv~tN  132 (328)
T 2hjr_A           78 EYLQNSDVVIITAGVPRK--P--NMTRSD---LLTV----NAKIVGSVAENVGKYCPNAFVICITN  132 (328)
T ss_dssp             GGGTTCSEEEECCSCCCC--T--TCCSGG---GHHH----HHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             HHHCCCCEEEEcCCCCCC--C--CCchhh---HHhh----hHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            112478999999986421  1  122221   1222    23345555555555444566666654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.05  E-value=0.011  Score=49.01  Aligned_cols=36  Identities=14%  Similarity=0.267  Sum_probs=33.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      ++||+++|.|.++-+|+.+|+.|...|++|.++.+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999999988764

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.02  E-value=0.26  Score=41.53  Aligned_cols=37  Identities=24%  Similarity=0.399  Sum_probs=33.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLK   57 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~   57 (280)
                      .++.|.|+ |.+|..++..|++.|.  +|++++|+++.++
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~   46 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE   46 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            47999998 9999999999999998  9999999987665

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.02  E-value=0.013  Score=52.64  Aligned_cols=73  Identities=21%  Similarity=0.275  Sum_probs=53.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      .++|.|+ |.+|+.+|+.|.++|++|++++++++.++.+.+.+        .+..+.+|-+ +.+.++++      ...+
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--------~~~~i~Gd~~-~~~~L~~A------gi~~   68 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--------DLRVVNGHAS-HPDVLHEA------GAQD   68 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--------SCEEEESCTT-CHHHHHHH------TTTT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--------CcEEEEEcCC-CHHHHHhc------CCCc
Confidence            5777777 79999999999999999999999998887766543        3566788888 54333322      1136


Q ss_pred             ccEEEECCC
Q 023555          101 IDALVNNAG  109 (280)
Q Consensus       101 id~li~~ag  109 (280)
                      .|.+|...+
T Consensus        69 ad~~ia~t~   77 (461)
T 4g65_A           69 ADMLVAVTN   77 (461)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEEcC
Confidence            777776553

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.93  E-value=0.011  Score=49.22  Aligned_cols=38  Identities=32%  Similarity=0.491  Sum_probs=34.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +++||+++|.|.++-+|+.+|..|...|++|.++.+..
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            78999999999998899999999999999998887643

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.89  E-value=0.014  Score=48.53  Aligned_cols=45  Identities=22%  Similarity=0.354  Sum_probs=40.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~   63 (280)
                      .+|+++|.|+ ||.|++++..|.+.|+ +|.++.|+.++++++.+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            5788999996 8999999999999998 7999999999888887665

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.89  E-value=0.22  Score=44.74  Aligned_cols=45  Identities=20%  Similarity=0.261  Sum_probs=36.5

Q ss_pred             CcEEEEecCCC-hhHHHHHHHHHHh----CCeEEEEecChhHHHHHHHHH
Q 023555           19 NKVVMVTGASS-GLGREFCLDLAKA----GCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        19 ~k~vlItG~~~-giG~a~a~~l~~~----G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      .++|.|.||++ |.|.+++..|++.    |..|++.+++++.++......
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~   52 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIA   52 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHH
Confidence            45789999998 8999999988854    789999999998877654443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.87  E-value=0.014  Score=48.93  Aligned_cols=37  Identities=19%  Similarity=0.223  Sum_probs=34.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      +++||+++|.|.++-+|+.+|+.|...|++|.++.|.
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            7899999999998889999999999999999988773

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.81  E-value=0.011  Score=49.17  Aligned_cols=37  Identities=22%  Similarity=0.281  Sum_probs=34.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      +++||+++|.|.++-+|+.+++.|...|++|.++.+.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            7899999999998889999999999999999888664

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.80  E-value=0.012  Score=49.99  Aligned_cols=40  Identities=20%  Similarity=0.142  Sum_probs=36.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      ...+.||++.|.|. |.||+++|+.+...|++|+..+|+.+
T Consensus       134 ~~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~  173 (315)
T 3pp8_A          134 EYTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRK  173 (315)
T ss_dssp             CCCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred             CCCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCch
Confidence            35789999999987 89999999999999999999998754

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.80  E-value=0.2  Score=42.31  Aligned_cols=113  Identities=16%  Similarity=0.155  Sum_probs=66.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHh--CCeEEEEecChhHHHHHHHHHHhh---cCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKQ---SGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++.|.|+ |.+|.+++..|++.  |.+|+++++++++++....++...   .....++.. ..    +.+          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~----d~~----------   65 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SN----DYA----------   65 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ES----CGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CC----CHH----------
Confidence            5788998 99999999999985  789999999988777554444321   111111111 11    211          


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                       .+...|++|..++...  .+  ..+..   +.+..|..-...+.+.    +.+..+.+.+|+++.
T Consensus        66 -~l~~aDvViiav~~p~--~~--g~~r~---dl~~~n~~i~~~i~~~----i~~~~~~~~viv~tN  119 (310)
T 1guz_A           66 -DTANSDIVIITAGLPR--KP--GMTRE---DLLMKNAGIVKEVTDN----IMKHSKNPIIIVVSN  119 (310)
T ss_dssp             -GGTTCSEEEECCSCCC--CT--TCCHH---HHHHHHHHHHHHHHHH----HHHHCSSCEEEECCS
T ss_pred             -HHCCCCEEEEeCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHH----HHHhCCCcEEEEEcC
Confidence             1247899999998531  11  22232   3444555444444444    443334677777754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.79  E-value=0.059  Score=45.81  Aligned_cols=89  Identities=16%  Similarity=0.180  Sum_probs=55.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH-------HHhhcCCCcceEEEEeccCCCHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE-------INKQSGSSVRAMAVELDVSANGAAIE   88 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   88 (280)
                      +.+.+++.|.|. |.+|..+++.|++.|++|++++|++++.+.+.+.       +.+... ...++++  -+. +...++
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~-~aDvVi~--~vp-~~~~~~  102 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAAR-DADIVVS--MLE-NGAVVQ  102 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHT-TCSEEEE--CCS-SHHHHH
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHh-cCCEEEE--ECC-CHHHHH
Confidence            344568888865 8999999999999999999999999887765431       111111 1123322  233 345566


Q ss_pred             HHHH--HHHHHcCCccEEEECCC
Q 023555           89 NSVQ--KAWEAFGRIDALVNNAG  109 (280)
Q Consensus        89 ~~~~--~~~~~~g~id~li~~ag  109 (280)
                      .++.  .+.....+-.++|+...
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHHcchhHHhhCCCCCEEEecCC
Confidence            6665  55555445566666654

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.79  E-value=0.076  Score=45.07  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=36.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLC   60 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~   60 (280)
                      +..+++.|.| .|.+|.++++.|.+.|+  +|++++|+++.++.+.
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~   75 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   75 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            3447899998 69999999999999999  8999999988776644

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.76  E-value=0.099  Score=47.16  Aligned_cols=43  Identities=19%  Similarity=0.228  Sum_probs=36.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~   62 (280)
                      -++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+.
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            345667766 8999999999999999999999999988776654

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=95.76  E-value=0.11  Score=46.45  Aligned_cols=122  Identities=15%  Similarity=0.126  Sum_probs=72.3

Q ss_pred             CCCcEEEEecCCCh-hHHHHHHHHHH----hCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           17 LDNKVVMVTGASSG-LGREFCLDLAK----AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        17 l~~k~vlItG~~~g-iG~a~a~~l~~----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      |++.+|.|.||++- -|.+++..|+.    .| +|++.|++++.++...... +.... ..   ...-.+.+   .++++
T Consensus         3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~-~~l~~-~~---~~I~~TtD---~~eAl   73 (450)
T 3fef_A            3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIG-NHSGN-GR---WRYEAVST---LKKAL   73 (450)
T ss_dssp             CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHH-TTSTT-SC---EEEEEESS---HHHHH
T ss_pred             CCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHH-HHHhc-cC---CeEEEECC---HHHHh
Confidence            45667888888764 79999999987    56 9999999998876653322 22111 11   11122222   23333


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHh-----------h---------hhHHHHHHHHHHHHHHhcC
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT-----------N---------LTGSWLVSKYVCIRMRDAN  151 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~-----------n---------~~~~~~l~~~~~~~~~~~~  151 (280)
                      +       ..|+||..+.+..         .+.+....++           -         ...+..+++.+.+.+.+..
T Consensus        74 ~-------dADfVI~airvG~---------~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~  137 (450)
T 3fef_A           74 S-------AADIVIISILPGS---------LDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYA  137 (450)
T ss_dssp             T-------TCSEEEECCCSSC---------HHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             c-------CCCEEEeccccCC---------cccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHC
Confidence            3       7899999986421         1111111111           1         1123446677777887766


Q ss_pred             CCCeEEEEeccc
Q 023555          152 QEGSVINISSIA  163 (280)
Q Consensus       152 ~~g~vv~vsS~~  163 (280)
                      ..+.+|++|.-.
T Consensus       138 p~a~~i~~tNPv  149 (450)
T 3fef_A          138 PESWVINYTNPM  149 (450)
T ss_dssp             TTSEEEECCSSH
T ss_pred             CCeEEEEecCch
Confidence            678888888643

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.75  E-value=0.014  Score=47.72  Aligned_cols=42  Identities=19%  Similarity=0.260  Sum_probs=33.5

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      ...++.++++.|.| .|.+|.++|+.|++.|++|++.+|++++
T Consensus        13 ~~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           13 ENLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ------CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            44478889999996 6999999999999999999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	280
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-63
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-62
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-59
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-59
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-58
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-58
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-57
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	5e-57
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-56
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-56
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-55
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-55
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-54
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-54
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-54
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-54
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-53
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-53
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	9e-53
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-52
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-52
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-51
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-51
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-50
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-50
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	8e-50
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-48
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-47
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-47
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-47
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-47
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-47
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-47
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	6e-47
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	7e-47
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-46
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-45
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-45
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-43
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-43
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-42
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-42
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-41
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-41
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-41
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-40
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-40
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-39
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-39
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	7e-39
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-38
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-37
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	9e-37
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-35
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-33
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-33
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	5e-33
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-32
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-30
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	9e-27
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-24
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	5e-23
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-22
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-19
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-17
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	7e-14
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	3e-13
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	4e-12
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.001
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.001
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.002
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.002
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.003
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.004

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  198 bits (505), Expect = 1e-63
 Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 9/256 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             +++ +VTGAS G+G      L + G ++V  AR V  ++ L  E  K +G     +  
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAEC-KSAGYPGTLIPY 66

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+S N   I +           +D  +NNAG+     + L  +   W  +   N+   
Sbjct: 67  RCDLS-NEEDILSMFSAIRSQHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVLAL 124

Query: 137 WLVSKYVCIRMRDANQE-GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL- 194
            + ++     M++ N + G +INI+S++      L     Y+++K  + A+T+ L  EL 
Sbjct: 125 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 184

Query: 195 -GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD 253
                IR   I PG+ +++    L  KD     A+ TY        +  +   V Y++  
Sbjct: 185 EAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPE-DVAEAVIYVLST 241

Query: 254 SSEYVSGNIFIVDSGA 269
            +    G+I +  +G+
Sbjct: 242 PAHIQIGDIQMRPTGS 257

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  195 bits (496), Expect = 3e-62
 Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 16/266 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              KV ++TG+S+G+GR   +  A+ G ++    R  +RL+    +I     S     +V
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS---GAVKSPLDLTEEEWNHIMKTNL 133
             DV+   A  +  +      FG++D LVNNAG +      K+    + E ++  +  NL
Sbjct: 63  VADVT-TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
                ++K     +   + +G ++NISSIA+      P    Y+ +KA ++  T+  +++
Sbjct: 122 RSVIALTKKAVPHLS--STKGEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAID 178

Query: 194 LGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVAS--RTYPLRDFGTTDPALTSL 246
           L  H IRVNSI PGL  +     +       K + + +A+     P    G     +  +
Sbjct: 179 LIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DIAEV 237

Query: 247 VRYLV-HDSSEYVSGNIFIVDSGATL 271
           + +L    +S Y+ G+  +VD G++L
Sbjct: 238 IAFLADRKTSSYIIGHQLVVDGGSSL 263

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  187 bits (477), Expect = 1e-59
 Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 13/255 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMA 75
           L +K+ ++TG ++G+GR      A  G  I  A        ++    + +      R + 
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR------RVLT 56

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DVS     +E   ++    FGR D LVNNAG+        +LT E+W    + N+  
Sbjct: 57  VKCDVS-QPGDVEAFGKQVISTFGRCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDS 114

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            +L++K     M+  N  G +IN++S       ++     Y S+KA     T+ L+ +LG
Sbjct: 115 GFLMAKAFVPGMK-RNGWGRIINLTSTTY--WLKIEAYTHYISTKAANIGFTRALASDLG 171

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              I VN+I P L ++  TE        + + +    +         LT    +L  D +
Sbjct: 172 KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGAAAFLASDDA 230

Query: 256 EYVSGNIFIVDSGAT 270
            +++G    VD G  
Sbjct: 231 SFITGQTLAVDGGMV 245

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  187 bits (476), Expect = 2e-59
 Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 19/258 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K V+VTG + G+GR      A+ G  +     R +  + + + I             
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG--------GAFF 53

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           ++D+  +       V++A  A GR+D LVNNA ++    S L +   EW  +++ NLT  
Sbjct: 54  QVDLE-DERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAP 111

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +S     R       G+++N++S+            AY +SK GL  +T+ L+L+L  
Sbjct: 112 MHLSAL-AAREMRKVGGGAIVNVASVQGLFAE--QENAAYNASKGGLVNLTRSLALDLAP 168

Query: 197 HKIRVNSICPGLFKSEITEGLMKK----DWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
            +IRVN++ PG   +E     +      +         + LR  G  +  +   V +L  
Sbjct: 169 LRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLAS 227

Query: 253 DSSEYVSGNIFIVDSGAT 270
           + + +++G I  VD G T
Sbjct: 228 EKASFITGAILPVDGGMT 245

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (467), Expect = 4e-58
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              KVV+VTG   G+G         +G R+V   +     ++L  E+         A+ +
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG-------AVFI 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+     ++  V +    FGR+D +VNNAG     + P + + + +  +++ NL G+
Sbjct: 57  LCDVT-QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + ++K     +R    +G+VINISS+           V Y ++K  + AMTK L+L+   
Sbjct: 116 YTLTKLALPYLRK--SQGNVINISSLVG--AIGQAQAVPYVATKGAVTAMTKALALDESP 171

Query: 197 HKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           + +RVN I PG   + + E L       +  +        PL   G     + +   +L 
Sbjct: 172 YGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ-PLGRMGQPA-EVGAAAVFLA 229

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            +++ + +G   +V  GA L
Sbjct: 230 SEAN-FCTGIELLVTGGAEL 248

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  183 bits (466), Expect = 7e-58
 Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 12/256 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV ++TG + G+G        + G +++   R  D  +     +    G+  +    
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----GTPDQIQFF 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + D S +            +AFG +  LVNNAG++   KS  + T  EW  ++  NL G 
Sbjct: 60  QHDSS-DEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGV 117

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE--L 194
           +  ++    RM++     S+IN+SSI        P   AY +SK  +  M+K  +L+  L
Sbjct: 118 FFGTRLGIQRMKNKGLGASIINMSSIEG--FVGDPSLGAYNASKGAVRIMSKSAALDCAL 175

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
             + +RVN++ PG  K+ + + L   +   +  ++T P+   G  +  +  +  YL  + 
Sbjct: 176 KDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPN-DIAYICVYLASNE 233

Query: 255 SEYVSGNIFIVDSGAT 270
           S++ +G+ F+VD G T
Sbjct: 234 SKFATGSEFVVDGGYT 249

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  182 bits (463), Expect = 4e-57
 Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 16/266 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             NK V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K   S  +  +V
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNL 133
             DV+      +  +    + FG+ID LVNNAG +       +  D   + ++  +K NL
Sbjct: 63  VADVT-TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
                ++K V   +     +G ++N+SSI A  + Q P  + YA +KA L+  T+  +++
Sbjct: 122 QAVIEMTKKVKPHLV--ASKGEIVNVSSIVAGPQAQ-PDFLYYAIAKAALDQYTRSTAID 178

Query: 194 LGVHKIRVNSICPGLFKSEITEGL-----MKKDWLNNVAS--RTYPLRDFGTTDPALTSL 246
           L    IRVNS+ PG+ ++  T  +       + + N +AS     P+   G  +  + ++
Sbjct: 179 LAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HIANI 237

Query: 247 VRYLV-HDSSEYVSGNIFIVDSGATL 271
           + +L   + S Y+ G   + D G +L
Sbjct: 238 ILFLADRNLSFYILGQSIVADGGTSL 263

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  181 bits (461), Expect = 5e-57
 Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 11/260 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V+VTG + G+G     + A  G  I   AR    L     +  K+     +    
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF---QVTGS 62

Query: 77  ELDVSANGAAIENSVQKAWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             D S      E  +Q     F G++D L+NN G   + K  LD T E+++  + TNL  
Sbjct: 63  VCDAS-LRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLES 120

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ +S+     ++ +      I   S  A        G  Y+++K  LN + + L+ E  
Sbjct: 121 AYHLSQLAHPLLKASGCGN--IIFMSSIAGVVSA-SVGSIYSATKGALNQLARNLACEWA 177

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IR N++ P +  + + E +   ++   V SR  PL  FG  +  ++SLV +L   ++
Sbjct: 178 SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK-PLGRFGEPE-EVSSLVAFLCMPAA 235

Query: 256 EYVSGNIFIVDSGATLPGLP 275
            Y++G    VD G T+ G  
Sbjct: 236 SYITGQTICVDGGLTVNGFS 255

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  181 bits (459), Expect = 1e-56
 Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 14/264 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              K V++TG+S+G+GR   +  AK G ++    R  DRL+    +I K    + +  AV
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTG 135
             DV+   +  ++ +      FG+ID LVNNAG + A  +   D   E +    K N   
Sbjct: 62  VADVT-EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
              +++     +    +    I   S          G   YA +KA L+  T+C +++L 
Sbjct: 121 VIEMTQKTKEHL---IKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI 177

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNN-------VASRTYPLRDFGTTDPALTSLVR 248
            H +RVNS+ PG   +     +   +  ++             P+   G  +  + +++ 
Sbjct: 178 QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIANIIV 236

Query: 249 YLV-HDSSEYVSGNIFIVDSGATL 271
           +L   + S Y+ G   + D G+TL
Sbjct: 237 FLADRNLSSYIIGQSIVADGGSTL 260

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  178 bits (453), Expect = 6e-56
 Identities = 48/256 (18%), Positives = 91/256 (35%), Gaps = 19/256 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L NK V+   A  G+G +   +L K   +      RV+   +L +   K     V     
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL--KAINPKVNITFH 60

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+   A  +  ++K ++    +D L+N AG          L + +    +  N TG 
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQIERTIAINFTGL 111

Query: 137 WLVSKYVC--IRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
              +  +      R     G + NI S+       +     Y++SKA + + T  L+   
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTG--FNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
            +  +   SI PG+ ++ +         +    +         T++       +  V   
Sbjct: 170 PITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQC----GQNFVKAI 225

Query: 255 SEYVSGNIFIVDSGAT 270
               +G I+ +D G  
Sbjct: 226 EANKNGAIWKLDLGTL 241

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 2e-55
 Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 16/254 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V+VTGA  G+GR     L   G R+VA +R    L SL  E             V
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +D+         + ++A  + G +D LVNNA V   ++  L++T+E ++   + NL   
Sbjct: 58  CVDLGD-----WEATERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAV 111

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             VS+ V   +      G+++N+SS  +  +  +     Y S+K  L+ +TK ++LELG 
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCS--QRAVTNHSVYCSTKGALDMLTKVMALELGP 169

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           HKIRVN++ P +  + + +                PL  F   +  + + + +L+ D S 
Sbjct: 170 HKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSG 228

Query: 257 YVSGNIFIVDSGAT 270
             +G+   V+ G  
Sbjct: 229 MTTGSTLPVEGGFW 242

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  176 bits (448), Expect = 3e-55
 Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 7/254 (2%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  +V +VTG S GLG      LA+AGC +V A+R ++       ++ ++ G  V  MA 
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAF 60

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS N   ++  ++   E FG++D +VN AG++       +   +E+  +++ NL G+
Sbjct: 61  RCDVS-NYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGT 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + V +     +R+++     I            +P   AYA+SK G+ ++TK L+ E G 
Sbjct: 119 YYVCREAFSLLRESDNPS--IINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGR 176

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           + IRVN I PG +++++TE +       +   +  PL   G  +  L  +  +L  + ++
Sbjct: 177 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFLASEEAK 235

Query: 257 YVSGNIFIVDSGAT 270
           YV+G I  VD G T
Sbjct: 236 YVTGQIIFVDGGWT 249

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  174 bits (443), Expect = 2e-54
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 15/259 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L+    +VTG S G+G     +LA  G  +   +R    L     +   +        A 
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE---AS 62

Query: 77  ELDVSANGAAIENSVQKAWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             D+S + +  +  +      F G+++ LVNNAG+    K   D T E+++ IM  N   
Sbjct: 63  VCDLS-SRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFEA 120

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ +S      ++ + +   V   S   A +    P    Y ++K  ++ +T+CL+ E  
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAV---PYEAVYGATKGAMDQLTRCLAFEWA 177

Query: 196 VHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
              IRVN + PG+  + + E  ++    K+ LN +  R   LR  G     L ++V +L 
Sbjct: 178 KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-ALRRMGEPK-ELAAMVAFLC 235

Query: 252 HDSSEYVSGNIFIVDSGAT 270
             ++ YV+G I  VD G  
Sbjct: 236 FPAASYVTGQIIYVDGGLM 254

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  174 bits (441), Expect = 3e-54
 Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 16/254 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
                 +VTGA  G+GR+    L  +G ++VA  R    L SL  E             V
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPV 55

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +D+        ++ +KA    G +D LVNNA +    +  L++T+E ++     NL   
Sbjct: 56  CVDLGD-----WDATEKALGGIGPVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSV 109

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + VS+ V   M +    GS++N+SS+   +    P  + Y+S+K  +  +TK +++ELG 
Sbjct: 110 FQVSQMVARDMINRGVPGSIVNVSSMV--AHVTFPNLITYSSTKGAMTMLTKAMAMELGP 167

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           HKIRVNS+ P +  +++ + +             +PLR F   +  + + + +L+ D S 
Sbjct: 168 HKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSA 226

Query: 257 YVSGNIFIVDSGAT 270
             SG   +VD+G  
Sbjct: 227 STSGGGILVDAGYL 240

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  174 bits (441), Expect = 4e-54
 Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 16/262 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +VTG +SG+G E    L   G ++  +       + L  E+ +      R+M V
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE------RSMFV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS + A     +       G ++ LVNNAG+            E+++ ++K N    
Sbjct: 58  RHDVS-SEADWTLVMAAVQRRLGTLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESV 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           ++  +     M++    GS+IN++S+++     +     Y++SKA ++A+T+  +L    
Sbjct: 116 FIGCQQGIAAMKETG--GSIINMASVSS--WLPIEQYAGYSASKAAVSALTRAAALSCRK 171

Query: 197 --HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG-TTDPA-LTSLVRYLVH 252
             + IRVNSI P    + + +  + K     +      L   G    P  +  LV +L  
Sbjct: 172 QGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS 231

Query: 253 DSSEYVSGNIFIVDSGATLPGL 274
           D S  +SG+    D+     GL
Sbjct: 232 DESSVMSGSELHADNSILGMGL 253

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  174 bits (441), Expect = 4e-54
 Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 12/260 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             NK ++VTG + G+G  F   +A AG  +    R       + +++ K+ G  V+  A 
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAY 64

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + DVS N   +  ++Q+     G I  L+ NAGV   VK   +LT E++  +   N+ G 
Sbjct: 65  QCDVS-NTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGV 122

Query: 137 WLVSKYVCIRMRDANQEGSVINIS-----SIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           +   + V        Q+GS++  S      I  +S       V Y SSKA  + + K L+
Sbjct: 123 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 182

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
            E     IRVN++ PG   ++ T   M K   ++ AS   PL  F   +  +T     L+
Sbjct: 183 AEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNI-PLNRFAQPE-EMTGQAILLL 239

Query: 252 HDSSEYVSGNIFIVDSGATL 271
            D + Y++G  + +D G  +
Sbjct: 240 SDHATYMTGGEYFIDGGQLI 259

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  173 bits (439), Expect = 1e-53
 Identities = 78/255 (30%), Positives = 118/255 (46%), Gaps = 13/255 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V++TG + GLG E       AG R+V A    +   +   E+         A   
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD------AARYQ 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+      +  V  A E FG +D LVNNAG+S         + E +  +++ NLTG 
Sbjct: 57  HLDVT-IEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGV 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           ++  K V   M+     GS++NISS A      L    +Y +SK G+  ++K  ++ELG 
Sbjct: 115 FIGMKTVIPAMK-DAGGGSIVNISSAAG--LMGLALTSSYGASKWGVRGLSKLAAVELGT 171

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
            +IRVNS+ PG+  + +T     +    N  +   P+   G     +   V  L+ D+S 
Sbjct: 172 DRIRVNSVHPGMTYTPMTAETGIRQGEGNYPN--TPMGRVGNEPGEIAGAVVKLLSDTSS 229

Query: 257 YVSGNIFIVDSGATL 271
           YV+G    VD G T 
Sbjct: 230 YVTGAELAVDGGWTT 244

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  171 bits (435), Expect = 3e-53
 Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 17/256 (6%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +L +K V++TGA+ G+GR      AK G R+VA       L+   + +         A  
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--------AHP 53

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V +DV+ + A++E    +A    GR+D +V+ AG++        +  E+W  +++ NLTG
Sbjct: 54  VVMDVA-DPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTG 111

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           S+LV+K     MR+ N    V+  S +   + GQ      YA+S AG+  +T+ L+LELG
Sbjct: 112 SFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQ----ANYAASMAGVVGLTRTLALELG 167

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN++ PG  ++ +T  +   + +   A    PL   G     +     +L+ D S
Sbjct: 168 RWGIRVNTLAPGFIETRMTAKVP--EKVREKAIAATPLGRAGKPL-EVAYAALFLLSDES 224

Query: 256 EYVSGNIFIVDSGATL 271
            +++G +  VD G T+
Sbjct: 225 SFITGQVLFVDGGRTI 240

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  170 bits (432), Expect = 9e-53
 Identities = 80/254 (31%), Positives = 121/254 (47%), Gaps = 11/254 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            +NKV +VTGA  G+GRE    LAK+   ++  +R      S+ DEI         +   
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY---ESSGY 64

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS     I   + K       +D LVNNAG++        +  +EW  +++TNL  S
Sbjct: 65  AGDVS-KKEEISEVINKILTEHKNVDILVNNAGITRDNLFL-RMKNDEWEDVLRTNLN-S 121

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
                    +    N+ G +INISSI     G   G   Y+SSKAG+   TK L+ EL  
Sbjct: 122 LFYITQPISKRMINNRYGRIINISSIVGL-TGN-VGQANYSSSKAGVIGFTKSLAKELAS 179

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             I VN+I PG   S++T+  + +    N+ S   P    GT +  + +L  +L  D S 
Sbjct: 180 RNITVNAIAPGFISSDMTDK-ISEQIKKNIISNI-PAGRMGTPE-EVANLACFLSSDKSG 236

Query: 257 YVSGNIFIVDSGAT 270
           Y++G +F++D G +
Sbjct: 237 YINGRVFVIDGGLS 250

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  170 bits (432), Expect = 1e-52
 Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 11/255 (4%)

Query: 16  QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +LD K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +  G   +A A
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFA 64

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              D++ +   +      A    G++D LVNNAG  G    P D+   ++    + N+  
Sbjct: 65  CRCDIT-SEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFS 121

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + +S+ V   M        +   S     +  +     +YASSKA  + + + ++ +LG
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITSMA---AENKNINMTSYASSKAAASHLVRNMAFDLG 178

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN I PG   ++  + ++  +    +   T P+R  G     + +   +L   ++
Sbjct: 179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT-PIRRLGQPQ-DIANAALFLCSPAA 236

Query: 256 EYVSGNIFIVDSGAT 270
            +VSG I  V  G  
Sbjct: 237 SWVSGQILTVSGGGV 251

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (425), Expect = 9e-52
 Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           + KV +VTGA+ G+GR F   L   G ++      ++        +++Q     + + ++
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQ 60

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV+ +   + ++ +K  + FGR+D LVNNAGV+          E+ W   ++ NL    
Sbjct: 61  CDVA-DQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVI 110

Query: 138 LVSKYVCIRMRDANQE--GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL--E 193
             +      M   N    G +IN+SS+A      +     Y +SK G+   T+  +L   
Sbjct: 111 SGTYLGLDYMSKQNGGEGGIIINMSSLAG--LMPVAQQPVYCASKHGIVGFTRSAALAAN 168

Query: 194 LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVAS------RTYPLRDFGTTDPALTSLV 247
           L    +R+N+ICPG   + I E + K++ +                         + + +
Sbjct: 169 LMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIANGL 227

Query: 248 RYLVHDSSEYVSGNIFIVDSGATL 271
             L+    + ++G I  + +   +
Sbjct: 228 ITLI--EDDALNGAIMKITTSKGI 249

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  167 bits (424), Expect = 2e-51
 Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 14/265 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L +KV ++TG + G+G        + G ++V A    D  + +C+ I    GS      V
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI----GSPDVISFV 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPL-DLTEEEWNHIMKTNLTG 135
             DV+     + N V       G++D +  N GV       + +   E++  +M  N+ G
Sbjct: 60  HCDVT-KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++LV+K+   R+    ++GS++  +SI++           Y ++K  +  +T  L  ELG
Sbjct: 119 AFLVAKHA-ARVMIPAKKGSIVFTASISS-FTAGEGVSHVYTATKHAVLGLTTSLCTELG 176

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKD---WLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
            + IRVN + P +  S +   +   D                     +  +   V YL  
Sbjct: 177 EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVAYLAG 235

Query: 253 DSSEYVSGNIFIVDSG--ATLPGLP 275
           D S+YVSG   ++D G   T P  P
Sbjct: 236 DESKYVSGLNLVIDGGYTRTNPAFP 260

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 4e-51
 Identities = 66/260 (25%), Positives = 130/260 (50%), Gaps = 13/260 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS--VRAM 74
           L  +V +VTG ++G+G+    +L + G  +V A+R+++RLKS  DE+      +   R +
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
            ++ ++  N   + N V+   + FG+I+ LVNN G    +     ++ + W+ +++TNLT
Sbjct: 70  PIQCNIR-NEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLT 127

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
           G++ + K V       +    V  I       +   P  V   +++AG+  +TK L+LE 
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNIIVPT----KAGFPLAVHSGAARAGVYNLTKSLALEW 183

Query: 195 GVHKIRVNSICPGLFKSEITE---GLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
               IR+N + PG+  S+      G   + +      +  P +  G  +  ++S+V +L+
Sbjct: 184 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI-PAKRIGVPE-EVSSVVCFLL 241

Query: 252 HDSSEYVSGNIFIVDSGATL 271
             ++ +++G    VD G +L
Sbjct: 242 SPAASFITGQSVDVDGGRSL 261

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  166 bits (420), Expect = 1e-50
 Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 10/266 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              KV  +TG  +GLG+     L+  G + V A+R++D LK+  ++I+ Q+G   +  A+
Sbjct: 23  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAI 80

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           + DV  +   ++N+V +  +  G  + ++NNA     +     L+   W  I    L G+
Sbjct: 81  QCDVR-DPDMVQNTVSELIKVAGHPNIVINNA-AGNFISPTERLSPNAWKTITDIVLNGT 138

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             V+  +  ++  A +  + ++I++I A +       V  AS+KAG+ AM+K L+ E G 
Sbjct: 139 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG--FVVPSASAKAGVEAMSKSLAAEWGK 196

Query: 197 HKIRVNSICPGLFKSEITEGLMK--KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
           + +R N I PG  K++     +     +   +  R  P    GT +  L +L  +L  D 
Sbjct: 197 YGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI-PCGRLGTVE-ELANLAAFLCSDY 254

Query: 255 SEYVSGNIFIVDSGATLPGLPIFSSL 280
           + +++G +   D G  +     F+ L
Sbjct: 255 ASWINGAVIKFDGGEEVLISGEFNDL 280

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  165 bits (419), Expect = 3e-50
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 26/257 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-----RLKSLCDEINKQSGSSV 71
            D +VV+VTGA  GLGR + L  A+ G  +V      D     +  S  D++ ++     
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 72  RAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT 131
                  D      A E  V+ A + FGRID +VNNAG+    +S   +++E+W+ I + 
Sbjct: 65  GKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDWDIIQRV 120

Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           +L GS+ V++     M+  N  G +I  +S +        G   Y+++K GL  +   L 
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNY-GRIIMTASASGIYGNF--GQANYSAAKLGLLGLANTLV 177

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
           +E   + I  N+I P          + +             L +    +  +  LV +L 
Sbjct: 178 IEGRKNNIHCNTIAPNAGSRMTETVMPE------------DLVEALKPE-YVAPLVLWLC 224

Query: 252 HDSSEYVSGNIFIVDSG 268
           H+S    +G +F V +G
Sbjct: 225 HESC-EENGGLFEVGAG 240

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  162 bits (412), Expect = 8e-50
 Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             ++VV++TG  SGLGR   + LA  G ++       + L++    + +        +  
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-APDAEVLTT 60

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS + A +E  V    E FGRID   NNAG+ G        T  E++ ++  NL G 
Sbjct: 61  VADVS-DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGV 119

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L  + V   MR+    G V+N +S+       +     YA++K G+  +T+  ++E G 
Sbjct: 120 FLGLEKVLKIMRE-QGSGMVVNTASVGG--IRGIGNQSGYAAAKHGVVGLTRNSAVEYGR 176

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVAS------RTYPLRDFGTTDPALTSLVRYL 250
           + IR+N+I PG   + + E  MK+    N         +  P + +G     + ++V +L
Sbjct: 177 YGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVAFL 235

Query: 251 VHDSSEYVSGNIFIVDSGAT 270
           + D + YV+  +  +D G +
Sbjct: 236 LSDDASYVNATVVPIDGGQS 255

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  159 bits (402), Expect = 2e-48
 Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 17/255 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K ++VTGA+SG+GR      A+ G  +VA  R    L      +         A+AV
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA------EAIAV 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DVS +  A+E    +A E FGR+  + + AGV+ +     +L  E W  +++ NLTGS
Sbjct: 57  VADVS-DPKAVEAVFAEALEEFGRLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGS 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +LV++     + +        +++ +         G   YA+ K G+  + + L+LEL  
Sbjct: 115 FLVARKAGEVLEEGGSLVLTGSVAGL------GAFGLAHYAAGKLGVVGLARTLALELAR 168

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             +RVN + PGL ++ +T GL    W   V +   PL   G  +  +     +L+ + S 
Sbjct: 169 KGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGA--SPLGRAGRPE-EVAQAALFLLSEESA 225

Query: 257 YVSGNIFIVDSGATL 271
           Y++G    VD G ++
Sbjct: 226 YITGQALYVDGGRSI 240

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 1e-47
 Identities = 43/207 (20%), Positives = 79/207 (38%), Gaps = 11/207 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +  ++V++TGA  G+GR    + AK   ++V        L+    +         +    
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA---KVHTF 61

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            +D S N   I +S +K     G +  LVNNAGV           + +     + N+   
Sbjct: 62  VVDCS-NREDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAH 119

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG- 195
           +  +K   +     N  G ++ ++S A      +P  +AY SSK       K L+ EL  
Sbjct: 120 FWTTKAF-LPAMTKNNHGHIVTVASAAG--HVSVPFLLAYCSSKFAAVGFHKTLTDELAA 176

Query: 196 --VHKIRVNSICPGLFKSEITEGLMKK 220
             +  ++   +CP    +   +     
Sbjct: 177 LQITGVKTTCLCPNFVNTGFIKNPSTS 203

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  156 bits (395), Expect = 2e-47
 Identities = 76/254 (29%), Positives = 115/254 (45%), Gaps = 19/254 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  KV +V+G + G+G      +   G ++V      +  K++  E+         A  V
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYV 57

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+   A  + +V  A  AFG +  LVNNAG+   + +  D    EW  I+  NLTG 
Sbjct: 58  HLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGV 115

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L  + V   M++A +   +   S               Y ++K  +  +TK  +LELG 
Sbjct: 116 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACH---GYTATKFAVRGLTKSTALELGP 172

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             IRVNSI PGL K+ +T      DW+     +T  L         +++LV YL  D S 
Sbjct: 173 SGIRVNSIHPGLVKTPMT------DWVPEDIFQT-ALGRAAEPV-EVSNLVVYLASDESS 224

Query: 257 YVSGNIFIVDSGAT 270
           Y +G  F+VD G  
Sbjct: 225 YSTGAEFVVDGGTV 238

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  156 bits (396), Expect = 2e-47
 Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L     +VTG S G+G     +LA  G R+   +R    L    +   ++  +       
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE---GS 60

Query: 77  ELDVSANGAAIENSVQKAWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
             D+  +    +  +Q     F G+++ LVNNAGV    K   D TE+++N IM TN   
Sbjct: 61  VCDLL-SRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEA 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++ +S+     +  A+Q G+VI +SSIA  S         Y++SK  +N MTK L+ E  
Sbjct: 119 AYHLSQI-AYPLLKASQNGNVIFLSSIAGFSALPSV--SLYSASKGAINQMTKSLACEWA 175

Query: 196 VHKIRVNSICPGLFKSEITEGLM-----KKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
              IRVNS+ PG+  + + E  +     +K+ ++N   +T P+   G     +++L+ +L
Sbjct: 176 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT-PMGRAGKPQ-EVSALIAFL 233

Query: 251 VHDSSEYVSGNIFIVDSGATLPG 273
              ++ Y++G I   D G T  G
Sbjct: 234 CFPAASYITGQIIWADGGFTANG 256

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 3e-47
 Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 21/259 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD KV+++T A+ G+G+   L  A+ G +++A      +L+ L      Q          
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ---------- 53

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
                      +  + +      R+D L N AG      + LD  E++W+  M  N+   
Sbjct: 54  ---TRVLDVTKKKQIDQFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSM 109

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +L+ K   +    A + G++IN+SS+A++ +G       Y+++KA +  +TK ++ +   
Sbjct: 110 YLMIKAF-LPKMLAQKSGNIINMSSVASSVKGV-VNRCVYSTTKAAVIGLTKSVAADFIQ 167

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTY----PLRDFGTTDPALTSLVRYLVH 252
             IR N +CPG   +   +  ++       A   +        F T +  +  L  YL  
Sbjct: 168 QGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVYLAS 226

Query: 253 DSSEYVSGNIFIVDSGATL 271
           D S YV+GN  I+D G +L
Sbjct: 227 DESAYVTGNPVIIDGGWSL 245

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  156 bits (395), Expect = 3e-47
 Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 18/263 (6%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           D++V +VTGA+SG+G E    L K G R+   AR  + L++   E+ +       A    
Sbjct: 1   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV---EADGRT 57

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            DV  +   IE  V    E +G +D LVNNAG  G   +  +L +E W  +++TNLTG +
Sbjct: 58  CDVR-SVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVF 115

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH 197
            V+K V  +     + G+   ++  +   +  +     Y++SK G+   TK L LEL   
Sbjct: 116 RVTKQVL-KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 174

Query: 198 KIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRTYPLRDFGTTDPALTSLV 247
            I VN++CPG  ++ +   + +          ++  + + +R  P+  +      +  +V
Sbjct: 175 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV-PIGRYVQPS-EVAEMV 232

Query: 248 RYLVHDSSEYVSGNIFIVDSGAT 270
            YL+   +  V+     V  G  
Sbjct: 233 AYLIGPGAAAVTAQALNVCGGLG 255

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  156 bits (395), Expect = 4e-47
 Identities = 81/256 (31%), Positives = 133/256 (51%), Gaps = 9/256 (3%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMA 75
           L+ KVV++TG+S+GLG+   +  A    ++V   R   D   S+ +EI K  G    A+A
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---EAIA 61

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ DV+   + + N VQ A + FG++D ++NNAG+     S  +++  +WN ++ TNLTG
Sbjct: 62  VKGDVT-VESDVINLVQSAIKEFGKLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLTG 119

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           ++L S+       + + +G+VIN+SS+    +   P  V YA+SK G+  MT+ L+LE  
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVH--EKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS 255
              IRVN+I PG   + I                  P+   G  +  + ++  +L    +
Sbjct: 178 PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSEA 236

Query: 256 EYVSGNIFIVDSGATL 271
            YV+G     D G TL
Sbjct: 237 SYVTGITLFADGGMTL 252

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  155 bits (393), Expect = 6e-47
 Identities = 52/263 (19%), Positives = 96/263 (36%), Gaps = 26/263 (9%)

Query: 24  VTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSAN 83
           VT      G    L L++AG  +        +   L          +      +L    +
Sbjct: 5   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL---------EAFAETYPQLKPM-S 54

Query: 84  GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYV 143
                  ++    A+G++D LV+N   +   +       E++   ++      + +   V
Sbjct: 55  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114

Query: 144 CIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNS 203
             +M+       +   S+       +L     Y S++AG   +   LS ELG + I V +
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELST---YTSARAGACTLANALSKELGEYNIPVFA 171

Query: 204 ICPGLFKSEITEGLMK-------KDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           I P    SE +             + + +V   T  L+  GT    L  LV +L   S +
Sbjct: 172 IGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT-ALQRLGTQK-ELGELVAFLASGSCD 229

Query: 257 YVSGNIFIVDSGATL----PGLP 275
           Y++G +F +  G  +    PG+P
Sbjct: 230 YLTGQVFWLAGGFPMIERWPGMP 252

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  156 bits (394), Expect = 7e-47
 Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 22/267 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMA 75
           L+ KV +VTGA  G+GRE  ++L + GC+++       +  + +   I K       A  
Sbjct: 16  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS---DAAC 72

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           V+ +V      I    ++A + FG++D + +N+GV  +     D+T EE++ +   N  G
Sbjct: 73  VKANVG-VVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRG 130

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + V++     +      G +I + SI       +P    Y+ SK  +    +C+++++ 
Sbjct: 131 QFFVAREAYKHL---EIGGRLILMGSITGQ-AKAVPKHAVYSGSKGAIETFARCMAIDMA 186

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNN-----------VASRTYPLRDFGTTDPALT 244
             KI VN + PG  K+++   + ++   N             A +  PLR  G     + 
Sbjct: 187 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIA 245

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGATL 271
            +V +L  +   +V+G +  +D GA +
Sbjct: 246 RVVCFLASNDGGWVTGKVIGIDGGACM 272

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  154 bits (389), Expect = 3e-46
 Identities = 58/265 (21%), Positives = 115/265 (43%), Gaps = 22/265 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMA 75
           L  KV + TGA  G+GR   ++L + G  +V          + +  E+ K      + +A
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA---QGVA 60

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           ++ D+S   + +     KA   FG +D +++N+G+       L++T+E ++ +   N  G
Sbjct: 61  IQADIS-KPSEVVALFDKAVSHFGGLDFVMSNSGMEVW-CDELEVTQELFDKVFNLNTRG 118

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
            + V++      R     G  I ++S  A     +P    YA SKA +    +  +++ G
Sbjct: 119 QFFVAQQGLKHCR----RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCG 174

Query: 196 VHKIRVNSICPGLFKSEITEGL-----------MKKDWLNNVASRTYPLRDFGTTDPALT 244
              + VN I PG  K+++ +             M ++ ++   +   PL+  G     + 
Sbjct: 175 AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-DIG 233

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGA 269
             V  L  + SE+++G +  +  G 
Sbjct: 234 RAVSALCQEESEWINGQVIKLTGGG 258

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  152 bits (386), Expect = 1e-45
 Identities = 51/270 (18%), Positives = 99/270 (36%), Gaps = 26/270 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  + V++TG +SGLGR         G ++    +  +RL  L  +           + +
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG------DNVLGI 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKS----PLDLTEEEWNHIMKTN 132
             DV  +    + +  +    FG+ID L+ NAG+     +    P +  +  ++ +   N
Sbjct: 57  VGDVR-SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHIN 115

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           + G     K     +      G+VI   S A        GG  Y ++K  +  + + L+ 
Sbjct: 116 VKGYIHAVKACLPALVA--SRGNVIFTISNAG--FYPNGGGPLYTAAKHAIVGLVRELAF 171

Query: 193 ELGVHKIRVNSICPGLFKSEIT--------EGLMKKDWLNNVASRTYPLRDFGTTDPALT 244
           EL  + +RVN +  G   S++            +    L ++     P+      +   T
Sbjct: 172 ELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE-EYT 229

Query: 245 SLVRYLV-HDSSEYVSGNIFIVDSGATLPG 273
               +      +   +G +   D G  + G
Sbjct: 230 GAYVFFATRGDAAPATGALLNYDGGLGVRG 259

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  152 bits (384), Expect = 2e-45
 Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 24/267 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            + KV +VTGA   +G    L LA+ G  I       + L+     + ++      A + 
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV---EARSY 59

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             DV+ +  A+  +V      FG+ID L NNAG  GA     D   +++  ++  N+TG+
Sbjct: 60  VCDVT-SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 118

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +        R       G ++N +S+A       P   AY +SK  + A+T+  +L+L  
Sbjct: 119 F-HVLKAVSRQMITQNYGRIVNTASMAG--VKGPPNMAAYGTSKGAIIALTETAALDLAP 175

Query: 197 HKIRVNSICPGLFKSEITE---------------GLMKKDWLNNVASRTYPLRDFGTTDP 241
           + IRVN+I PG                           K     +     P+R +G  + 
Sbjct: 176 YNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV-PMRRYGDIN- 233

Query: 242 ALTSLVRYLVHDSSEYVSGNIFIVDSG 268
            +  +V +L+ D S +++G    +  G
Sbjct: 234 EIPGVVAFLLGDDSSFMTGVNLPIAGG 260

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  146 bits (370), Expect = 1e-43
 Identities = 73/255 (28%), Positives = 128/255 (50%), Gaps = 14/255 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
            + K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +            +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA------NGKGL 55

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            L+V+ + A+IE+ ++K    FG +D LVNNAG++        + +EEWN I++TNL+  
Sbjct: 56  MLNVT-DPASIESVLEKIRAEFGEVDILVNNAGITRDNLLM-RMKDEEWNDIIETNLSSV 113

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + +SK V   M    + G +I I S+  T  G   G   YA++KAGL   +K L+ E+  
Sbjct: 114 FRLSKAVMRAMM-KKRHGRIITIGSVVGT-MGN-GGQANYAAAKAGLIGFSKSLAREVAS 170

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             I VN + PG  ++++T   +  D    + ++  P    G     + + V +L  D + 
Sbjct: 171 RGITVNVVAPGFIETDMTRA-LSDDQRAGILAQV-PAGRLGGAQ-EIANAVAFLASDEAA 227

Query: 257 YVSGNIFIVDSGATL 271
           Y++G    V+ G  +
Sbjct: 228 YITGETLHVNGGMYM 242

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  145 bits (368), Expect = 2e-43
 Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           + +K V+V  AS G+GR     L++ G  +   AR  + LK                  V
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR------------YV 49

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
             D+          +   +E    +D LV NAG   A     +LT E++   + +     
Sbjct: 50  VCDLR-------KDLDLLFEKVKEVDILVLNAGGPKA-GFFDELTNEDFKEAIDSLFLNM 101

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             + +     M++    G ++ I+S +  S           S++  L    K LS E+  
Sbjct: 102 IKIVRNYLPAMKEKGW-GRIVAITSFSVISPI--ENLYTSNSARMALTGFLKTLSFEVAP 158

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
           + I VN + PG  ++E  + L+ ++    V S+  P+R     +  + S+V +L  + + 
Sbjct: 159 YGITVNCVAPGWTETERVKELLSEEKKKQVESQI-PMRRMAKPE-EIASVVAFLCSEKAS 216

Query: 257 YVSGNIFIVDSGAT 270
           Y++G   +VD G +
Sbjct: 217 YLTGQTIVVDGGLS 230

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 2e-42
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 10/206 (4%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +     +   +S   +A 
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            ++   +    E  V +A +  G +D L+ N        +            M+ N    
Sbjct: 72  TME---DMTFAEQFVAQAGKLMGGLDMLILNHIT-NTSLNLFHDDIHHVRKSMEVNFLSY 127

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
            +++      ++ +N  GS++ +SS+A   +   P   AY++SK  L+     +  E  V
Sbjct: 128 VVLTVAALPMLKQSN--GSIVVVSSLAG--KVAYPMVAAYSASKFALDGFFSSIRKEYSV 183

Query: 197 HK--IRVNSICPGLFKSEITEGLMKK 220
            +  + +     GL  +E     +  
Sbjct: 184 SRVNVSITLCVLGLIDTETAMKAVSG 209

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  143 bits (361), Expect = 3e-42
 Identities = 67/265 (25%), Positives = 106/265 (40%), Gaps = 19/265 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMA 75
           L  KV +VTG++SG+G      LA  G  IV         ++ +   +  Q G  V+ + 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLY 59

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
              D+S  G A+   V  A    GRID LVNNAG+     + ++    E    +      
Sbjct: 60  DGADLS-KGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLS 116

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +        +        G +INI+S             AY ++K G+   TK  +LE  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASA--NKSAYVAAKHGVVGFTKVTALETA 174

Query: 196 VHKIRVNSICPGLFKSEITE----------GLMKKDWLNNVASRTYPLRDFGTTDPALTS 245
              I  N+ICPG  ++ + E          G+ ++     + S   P   F T +  L  
Sbjct: 175 GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGG 233

Query: 246 LVRYLVHDSSEYVSGNIFIVDSGAT 270
              +L  D++  ++G    VD G T
Sbjct: 234 TAVFLASDAAAQITGTTVSVDGGWT 258

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  141 bits (357), Expect = 2e-41
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 22/265 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           LD K  ++TG++ G+GR F     + G R+  A   ++  ++   EI         A A+
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGP------AACAI 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
            LDV+ + A+I+  V +  + +G ID LVNNA +   +   +++T E ++ +   N++G+
Sbjct: 57  ALDVT-DQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGT 114

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
             +      R   A   G  I   +  A  RG+   GV   ++KA + ++T+   L L  
Sbjct: 115 LFM-MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYC-ATKAAVISLTQSAGLNLIR 172

Query: 197 HKIRVNSICPGLFKSEITEGLMKK----------DWLNNVASRTYPLRDFGTTDPALTSL 246
           H I VN+I PG+   E  +G+  K          +    V +   P    G  +  LT +
Sbjct: 173 HGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV-PFGRMGRAE-DLTGM 230

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATL 271
             +L    ++Y+    + VD G  +
Sbjct: 231 AIFLATPEADYIVAQTYNVDGGNWM 255

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  141 bits (355), Expect = 3e-41
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 17/261 (6%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           KV +VTGA  G+G+   L L K G  +  A       K++  EIN+  G    A+AV++D
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG---HAVAVKVD 58

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           VS +   +  +V++A +  G  D +VNNAGV+        +T E  + +   N+ G    
Sbjct: 59  VS-DRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWG 116

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
            +      +     G +IN  S A       P    Y+SSK  +  +T+  + +L    I
Sbjct: 117 IQAAVEAFKKEGHGGKIINACSQAG--HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGI 174

Query: 200 RVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
            VN  CPG+ K+ +   + ++          +     ++   L      +  + + V YL
Sbjct: 175 TVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVSYL 233

Query: 251 VHDSSEYVSGNIFIVDSGATL 271
               S+Y++G   ++D G   
Sbjct: 234 ASPDSDYMTGQSLLIDGGMVF 254

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  140 bits (354), Expect = 4e-41
 Identities = 50/263 (19%), Positives = 94/263 (35%), Gaps = 20/263 (7%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKQSGSSVRA 73
           L   V ++TGAS G GR     LA+    G  ++ +AR    L+ L +E+  Q    ++ 
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-QPDLKV 62

Query: 74  MAVELDVSANGAAIENSVQKAWE----AFGRIDALVNNAGVSGAVKSPL--DLTEEEWNH 127
           +    D+    A ++  +    E       +   L+NNA   G V           E N+
Sbjct: 63  VLAAADLG-TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 128 IMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMT 187
               NLT    ++       +D+      +   S     +    G   Y + KA  + + 
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY-KGWGLYCAGKAARDMLY 180

Query: 188 KCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASR---TYPLRDFGTTDPALT 244
           + L+ E     +RV S  PG   +++ +   +      + S+                  
Sbjct: 181 QVLAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-TSA 237

Query: 245 SLVRYLVHDSSEYVSG-NIFIVD 266
             +  L+   + + SG ++   D
Sbjct: 238 QKLLGLLQKDT-FQSGAHVDFYD 259

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  139 bits (350), Expect = 1e-40
 Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 13/254 (5%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            VV+VTGAS G+G+   L L KAGC+++   AR     + +  +I    G   +A+    
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGG 58

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           DVS   A +E  ++ A +A+G ID  V N          + + + +W+ ++  NLTG +L
Sbjct: 59  DVS-KEADVEAMMKTAIDAWGTIDV-VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFL 116

Query: 139 VSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHK 198
            ++     M    ++G +INI+S+     G   G   YA++KAG+   +K  + E     
Sbjct: 117 CTQAATKIMM-KKRKGRIINIASVVGL-IGN-IGQANYAAAKAGVIGFSKTAAREGASRN 173

Query: 199 IRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL-VHDSSEY 257
           I VN +CPG   S++T  L  +D    +     PL   G  +  +  LV +L +  ++ Y
Sbjct: 174 INVNVVCPGFIASDMTAKLG-EDMEKKILGTI-PLGRTGQPE-NVAGLVEFLALSPAASY 230

Query: 258 VSGNIFIVDSGATL 271
           ++G  F +D G  +
Sbjct: 231 ITGQAFTIDGGIAI 244

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  138 bits (349), Expect = 1e-40
 Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 27/252 (10%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCR-------IVAAARRVDRLKSLCDEINKQSGSSVR 72
            ++++TGA  G+GR   L+ A+A          +V ++R    L+ +  E   +      
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA---L 58

Query: 73  AMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN 132
              +  D+S + A +        E +G ID LVNNAGV     +  DLTEE++++ M TN
Sbjct: 59  TDTITADIS-DMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTN 116

Query: 133 LTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
           L G++ +++ +   M      G +  I+S+AA           Y  SK G   + + + L
Sbjct: 117 LKGTFFLTQALFALME-RQHSGHIFFITSVAA--TKAFRHSSIYCMSKFGQRGLVETMRL 173

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
                 +R+  + PG   + +   +  +                   +  + + V     
Sbjct: 174 YARKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPE-DIAAPVVQAYL 221

Query: 253 DSSEYVSGNIFI 264
             S  V   I +
Sbjct: 222 QPSRTVVEEIIL 233

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  137 bits (345), Expect = 1e-39
 Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 18/265 (6%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKQSGSSVRAMAVEL- 78
             ++TG +  +G    + L + G R+V   R  +   + L  E+N     S      +L 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVK----------SPLDLTEEEWNHI 128
             S+     E+ +  ++ AFGR D LVNNA                 +     + +   +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 129 MKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA--ATSRGQLPGGVAYASSKAGLNAM 186
             +N      + +    R  +     S          A +   LPG   Y  +K  L  +
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 187 TKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL 246
           T+  +LEL    IRVN++ PGL    +    M ++       +    +   +    +   
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLS---LLPPAMPQETQEEYRRKVPLGQSEASAA-QIADA 238

Query: 247 VRYLVHDSSEYVSGNIFIVDSGATL 271
           + +LV   + Y++G    VD G  L
Sbjct: 239 IAFLVSKDAGYITGTTLKVDGGLIL 263

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 2e-39
 Identities = 53/288 (18%), Positives = 101/288 (35%), Gaps = 68/288 (23%)

Query: 20  KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVEL 78
            V +VTG + G+G     DL +     +V  AR V R ++   ++  +          +L
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL---SPRFHQL 60

Query: 79  DVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWL 138
           D+  +  +I        + +G +D LVNNAG++    +       +    MKTN  G+  
Sbjct: 61  DID-DLQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRD 118

Query: 139 VSKYVCIRMRDANQEGSVINISSIAA---------------------------------- 164
           V   +   ++    +G V+N+SSI +                                  
Sbjct: 119 VCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 175

Query: 165 -----TSRGQLPGGVAYASSKAGLNAMTKCLSLELGVH----KIRVNSICPGLFKSEITE 215
                  + +     AY  +K G+  +++  + +L       KI +N+ CPG  ++++  
Sbjct: 176 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 235

Query: 216 GLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIF 263
               K                   + A T +   L+   +E   G   
Sbjct: 236 PKATKS----------------PEEGAETPVYLALLPPDAEGPHGQFV 267

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  134 bits (337), Expect = 7e-39
 Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 22/252 (8%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             ++ V+VTG + G+G      LA  G ++    R     K                  V
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGV 50

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           E+DV+ +  A++ +     E  G ++ LV+NAG+S      + +TEE++  ++  NLTG+
Sbjct: 51  EVDVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGA 108

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           + V++     M+  N+ G +I I S++            YA+SKAG+  M + ++ EL  
Sbjct: 109 FRVAQRASRSMQR-NKFGRMIFIGSVSGLWGIGNQ--ANYAASKAGVIGMARSIARELSK 165

Query: 197 HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE 256
             +  N + PG   +++T  L   + +   A +  P +  GT    +  +V +L  + + 
Sbjct: 166 ANVTANVVAPGYIDTDMTRALD--ERIQQGALQFIPAKRVGTPA-EVAGVVSFLASEDAS 222

Query: 257 YVSGNIFIVDSG 268
           Y+SG +  VD G
Sbjct: 223 YISGAVIPVDGG 234

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  131 bits (331), Expect = 7e-38
 Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 26/215 (12%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
              V+VTGA+ G+G      L K      I+A AR V++   L    +       R   +
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS------RVHVL 56

Query: 77  ELDVSANGAAIENSVQKAWEAFGR--IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
            L V+    +++  V K  E  G   +  L+NNAGV  +  +  +         +  N T
Sbjct: 57  PLTVT-CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSI---------------AATSRGQLPGGVAYASS 179
              L+++ +   +++A  + S   +S                   TS       +AY  S
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 180 KAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT 214
           KA +N   + L+++L    + V + CPG  ++ + 
Sbjct: 176 KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  130 bits (327), Expect = 3e-37
 Identities = 55/262 (20%), Positives = 113/262 (43%), Gaps = 16/262 (6%)

Query: 17  LDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K  +V G ++   LG      L +AG   VA + + +RL+   +++ +  G ++   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGGALLFR 64

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS---GAVKSPLDLTEEEWNHIMKT 131
           A           ++       EAFG +D LV+    +         +D   ++W   ++ 
Sbjct: 65  ADVTQD----EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 132 NLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           +      V++     +R+    G ++ ++  A+     +P     A +KA L A  + L+
Sbjct: 121 SAYSLVAVARRAEPLLREG---GGIVTLTYYAS--EKVVPKYNVMAIAKAALEASVRYLA 175

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
            ELG   +RVN+I  G  ++     +     + +  ++T PLR   T +  + +L  +L+
Sbjct: 176 YELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE-VGNLGLFLL 234

Query: 252 HDSSEYVSGNIFIVDSGATLPG 273
              +  ++G +  VD+G  + G
Sbjct: 235 SPLASGITGEVVYVDAGYHIMG 256

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  128 bits (323), Expect = 9e-37
 Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 29/260 (11%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +  +VTG +SGLGR   L L   G R+V    R +                   + VE D
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED---------------LIYVEGD 46

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNN--AGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
           V+     +  +V +A E       +           +        E +  +++ NL G++
Sbjct: 47  VT-REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTF 105

Query: 138 LVSKYVCIRMRD-----ANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSL 192
            V +     MR+       Q G ++N +S+AA   GQ  G  AYA+SK G+ A+T   + 
Sbjct: 106 NVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-EGQ-IGQAAYAASKGGVVALTLPAAR 163

Query: 193 ELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH 252
           EL    IRV ++ PGLF + + +GL +K    ++A++       G  +    +LV +++ 
Sbjct: 164 ELAGWGIRVVTVAPGLFDTPLLQGLPEKAK-ASLAAQVPFPPRLGRPE-EYAALVLHIL- 220

Query: 253 DSSEYVSGNIFIVDSGATLP 272
             +  ++G +  +D    + 
Sbjct: 221 -ENPMLNGEVVRLDGALRMA 239

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  125 bits (315), Expect = 2e-35
 Identities = 51/265 (19%), Positives = 104/265 (39%), Gaps = 17/265 (6%)

Query: 17  LDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K ++VTG +S   +       + + G  +    +  D+LK   +E   Q GS +   
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDI--- 58

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDL----TEEEWNHIMK 130
            V     A  A+I+    +  + + + D  V++ G +   +   D     T E +     
Sbjct: 59  -VLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHD 117

Query: 131 TNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCL 190
            +      ++K     +   N   +++ +S + A     +P       +KA L A  + +
Sbjct: 118 ISSYSFVAMAKACRSML---NPGSALLTLSYLGA--ERAIPNYNVMGLAKASLEANVRYM 172

Query: 191 SLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL 250
           +  +G   +RVN+I  G  ++    G+     +        P+R   T +  + +   +L
Sbjct: 173 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIED-VGNSAAFL 231

Query: 251 VHDSSEYVSGNIFIVDSGATLPGLP 275
             D S  +SG +  VD G ++  + 
Sbjct: 232 CSDLSAGISGEVVHVDGGFSIAAMN 256

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (303), Expect = 2e-33
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 10/233 (4%)

Query: 19  NKVVMVTGASSGLGREFCLDLAKAGCRIV---AAARRVDRLKSLCDEINKQSGSSVRAMA 75
             VV++TG SSG+G    + LA    +     A  R +     L +     +        
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 76  VELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           ++LDV  + +      +            +      G +     L E+    ++  N+ G
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRVDV----LVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117

Query: 136 SWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG 195
           +  + +     M+     G V+   S+       LP    Y +SK  L  + + L++ L 
Sbjct: 118 TVRMLQAFLPDMK-RRGSGRVLVTGSVGG--LMGLPFNDVYCASKFALEGLCESLAVLLL 174

Query: 196 VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR 248
              + ++ I  G   +   E ++         +  +    F         + R
Sbjct: 175 PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR 227

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  119 bits (299), Expect = 3e-33
 Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 36/259 (13%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE 77
           + + V+V G    LG             + +     +   S    +      + +A  V 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVT 60

Query: 78  LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSW 137
            +V                   ++DA++  AG      +      +  + + K ++  S 
Sbjct: 61  AEV------------GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTST 108

Query: 138 LVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV- 196
           + S      +    + G +    + AA      PG + Y  +K  ++ + + L+ +    
Sbjct: 109 ISSHLATKHL---KEGGLLTLAGAKAA--LDGTPGMIGYGMAKGAVHQLCQSLAGKNSGM 163

Query: 197 -HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPA--LTSLVRYLVHD 253
                  ++ P    + +    M             P  DF +  P   L       +  
Sbjct: 164 PSGAAAIAVLPVTLDTPMNRKSM-------------PEADFSSWTPLEFLVETFHDWITG 210

Query: 254 SSEYVSGNIF--IVDSGAT 270
           +    SG++   +   G T
Sbjct: 211 NKRPNSGSLIQVVTTDGKT 229

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 5e-33
 Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 13/251 (5%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +   V ++TG +SGLG      L   G   V         ++   ++      +   +  
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
           E DV           +          A +  A  +  +K     T E++  ++  NL G+
Sbjct: 63  EKDVQTAL--ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 137 WLVSKYVCIRMRDANQE-----GSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLS 191
           + V + V   M     +     G +IN +S+AA   GQ  G  AY++SK G+  MT  ++
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-EGQ-VGQAAYSASKGGIVGMTLPIA 178

Query: 192 LELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV 251
            +L    IRV +I PGLF + +    + +   N +AS+       G        LV+ + 
Sbjct: 179 RDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVPFPSRLGDPA-EYAHLVQAI- 235

Query: 252 HDSSEYVSGNI 262
              + +++G +
Sbjct: 236 -IENPFLNGEV 245

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  117 bits (294), Expect = 2e-32
 Identities = 45/278 (16%), Positives = 95/278 (34%), Gaps = 57/278 (20%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
            +++++G ++G+G      L  AG +IV    R                       V  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------------EVIAD 41

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
           +S      +       +    +D LV  AG+            +   +++  N  G+  +
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP--------QTKVLGNVVSVNYFGATEL 93

Query: 140 SKYVCIRMRDANQE--------------------------GSVINISSIAATSRGQLPGG 173
                  ++  +Q                           G      +I     G+  G 
Sbjct: 94  MDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH-AGEQGGN 152

Query: 174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYP 232
           +AYA SK  L    +  +   G   +R+N+I PG  ++ + +  ++   +  ++A    P
Sbjct: 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPP 212

Query: 233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT 270
           +         + S++ +L+  ++ YV G   ++D G  
Sbjct: 213 MGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGID 249

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  110 bits (275), Expect = 8e-30
 Identities = 32/249 (12%), Positives = 75/249 (30%), Gaps = 29/249 (11%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V+V G    LG        K G  ++      +        ++     + +  ++     
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQT- 63

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSK 141
                       +     ++D +   AG      +      +  + ++K ++  S + +K
Sbjct: 64  -----------ASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK 112

Query: 142 YVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV--HKI 199
                +      G +    + AA   G  P  + Y  +KA ++ +T  L+ +        
Sbjct: 113 LATTHL---KPGGLLQLTGAAAA--MGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 167

Query: 200 RVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVS 259
            V +I P    + +    M                 +         L+++    SS   S
Sbjct: 168 AVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSS 217

Query: 260 GNIFIVDSG 268
           G +  + + 
Sbjct: 218 GALLKITTE 226

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  102 bits (255), Expect = 9e-27
 Identities = 57/268 (21%), Positives = 100/268 (37%), Gaps = 38/268 (14%)

Query: 20  KVVMVTGASSGLGREFC---LDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
             +++TG + GLG       L+L +    +    R  ++ K L D     S        +
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS----NIHIL 58

Query: 77  ELDVSANGAAIENSVQKAW-EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTG 135
           E+D+    A  +             ++ L NNAG++        +  +E    ++TN   
Sbjct: 59  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVV 118

Query: 136 SWLVSKYVCIRMRDA----------NQEGSVINISSIAATSRGQ-LPGGVAYASSKAGLN 184
             +++K     ++ A              ++IN+SSI  + +G    G  AY +SK+ LN
Sbjct: 119 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 178

Query: 185 AMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALT 244
           A TK LS++L   +I   S+ PG  K+++       D                   P  T
Sbjct: 179 AATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLD------------------VPTST 220

Query: 245 SLVRYLVHDSSEYVSGNIFIVDSGATLP 272
             +   +    E  +G     D G  L 
Sbjct: 221 GQIVQTISKLGEKQNGGFVNYD-GTPLA 247

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 58/284 (20%), Positives = 94/284 (33%), Gaps = 39/284 (13%)

Query: 21  VVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSS--------- 70
           V +VTGA+  LGR     L   G  +     R      +L   +N +  +S         
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 71  ------VRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEE 124
                 V        V+         V   +  +GR D LVNNA  S      L   E+ 
Sbjct: 64  NVATAPVSGADGSAPVT-LFTRCAELVAACYTHWGRCDVLVNNAS-SFYPTPLLRNDEDG 121

Query: 125 WN--------------HIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL 170
                            +  +N    + + K    R+     +    N S I        
Sbjct: 122 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 181

Query: 171 PGG---VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVA 227
                   Y  +K  L  +T+  +LEL   +IRVN + PGL    +    M         
Sbjct: 182 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS---VLVDDMPPAVWEGHR 238

Query: 228 SRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL 271
           S+    +   +    ++ +V +L    ++Y++G    VD G +L
Sbjct: 239 SKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 93.2 bits (230), Expect = 5e-23
 Identities = 43/266 (16%), Positives = 91/266 (34%), Gaps = 10/266 (3%)

Query: 17  LDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           L  K  ++ G ++   +           G  +       + L+     I ++  S     
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYE 61

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
                     +   +      +  G +D +V++   +        L E   +        
Sbjct: 62  LDVSKEEHFKSLYNSVK----KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEI 117

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
             + + +         N   SV+ +S + +T             +KA L +  + L+++L
Sbjct: 118 SVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY--NVMGLAKAALESAVRYLAVDL 175

Query: 195 GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS 254
           G H IRVN++  G  ++  + G+     +        PLR   + +  + +   YL+   
Sbjct: 176 GKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEE-VGNAGMYLLSSL 234

Query: 255 SEYVSGNIFIVDSGATLPGLPIFSSL 280
           S  VSG +  VD+G  + G+      
Sbjct: 235 SSGVSGEVHFVDAGYHVMGMGAVEEK 260

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 90.3 bits (223), Expect = 1e-22
 Identities = 26/183 (14%), Positives = 53/183 (28%), Gaps = 20/183 (10%)

Query: 17  LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAV 76
           +  K  +V   +  +G      LA  G  +V   R++D+ ++  D +NK+   +V A   
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 80

Query: 77  ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGS 136
                              EA      +     +         L +  W +     +   
Sbjct: 81  ------------ADDASRAEAVKGAHFVFTAGAIG-----LELLPQAAWQNESSIEIVAD 123

Query: 137 WLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGV 196
           +     + I   DA  +G                 GG+     +A +  + +        
Sbjct: 124 YNAQPPLGIGGIDATDKGKEYGGKRAFGALG---IGGLKLKLHRACIAKLFESSEGVFDA 180

Query: 197 HKI 199
            +I
Sbjct: 181 EEI 183

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 82.1 bits (201), Expect = 5e-19
 Identities = 38/266 (14%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 17  LDNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAM 74
           LD K ++V+G    S +         + G ++V       RL      I  +  +    +
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRLPAKAPLL 60

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
            +++    + A++   V +A  A  ++D +V++ G        ++   +     +   + 
Sbjct: 61  ELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIH 120

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLEL 194
                  Y  +            +I  +       +P       +K+ L ++ + ++ E 
Sbjct: 121 --ISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREA 178

Query: 195 GVHKIRVNSICPGLFKSEITEGLMK-----------KDWLNNVASRTYPLRDFGTTDPAL 243
           G + +R N +  G  ++     ++            +        R     +     P +
Sbjct: 179 GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP-V 237

Query: 244 TSLVRYLVHDSSEYVSGNIFIVDSGA 269
              V  L+ D     +G+I   D GA
Sbjct: 238 AKTVCALLSDWLPATTGDIIYADGGA 263

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 78.6 bits (192), Expect = 1e-17
 Identities = 54/296 (18%), Positives = 96/296 (32%), Gaps = 39/296 (13%)

Query: 17  LDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVD-------------------- 54
           L  K   + G +   G G      LA AG  I+                           
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 55  --------RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDALVN 106
                   ++  L    +          A +    ++   ++ + +   + FG ID LV+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 107 NAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS 166
           +      V  PL  T  +      +    S      +          G      +  A+ 
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISA---SSYSFVSLLSHFLPIMNPGGASISLTYIASE 182

Query: 167 RGQLPGGVAYASSKAGLNAMTKCLSLE-LGVHKIRVNSICPGLFKSEITEGLMKKDWLNN 225
           R     G   +S+KA L + T+ L+ E      IRVN+I  G   S   + +   D +  
Sbjct: 183 RIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIE 242

Query: 226 VASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGL----PIF 277
            +    P++   T D  + +   +LV   +  ++G    VD+G    G+    P+F
Sbjct: 243 YSYNNAPIQKTLTADE-VGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSPVF 297

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 68.4 bits (165), Expect = 7e-14
 Identities = 53/333 (15%), Positives = 108/333 (32%), Gaps = 80/333 (24%)

Query: 18  DNKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMA 75
           +  +  + G   ++G G     +L+K   +I+           + +  N +  + +    
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 76  VE---------LDVSANGA-------------------AIENSVQKAWEAFGRIDALVNN 107
            +          D S + A                    IE+      + +G+I+ LV++
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 108 AGVSGAVKSPLDLT-EEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS 166
              +  V+  L  T  + +   +  +      + KY    M+  +   S+   +S     
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQ---- 176

Query: 167 RGQLPGGVAYASSKAGLNAMTKCLSLELG-VHKIRVNSICPGLFKSEITEGLMKKDWLNN 225
           +     G   +S+KA L + T+ L+  LG  + IR+N+I  G  KS     + K +    
Sbjct: 177 KVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE 236

Query: 226 VASRTY-------------------------------------------PLRDFGTTDPA 242
             +                                              PLR    +   
Sbjct: 237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-D 295

Query: 243 LTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLP 275
           + S+  +L+   S  ++G    VD+G  +  LP
Sbjct: 296 IGSVASFLLSRESRAITGQTIYVDNGLNIMFLP 328

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 65.1 bits (157), Expect = 3e-13
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 9/188 (4%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
           +V ++ G    LG+   L LA  G  IV  +RR ++ ++   E  + +G +        D
Sbjct: 2   RVALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 80  VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLV 139
            +        ++         ID   +   +    K  +               +     
Sbjct: 61  AAEACDIAVLTIPWEH----AIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSA 115

Query: 140 SKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKI 199
           ++ V   +       ++  I    A     L     +     G +  +K + + L     
Sbjct: 116 AEIVAEVLESEKVVSALHTIP---AARFANLDEKFDWDVPVCGDDDESKKVVMSLISEID 172

Query: 200 RVNSICPG 207
            +  +  G
Sbjct: 173 GLRPLDAG 180

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 62.7 bits (151), Expect = 4e-12
 Identities = 32/195 (16%), Positives = 59/195 (30%), Gaps = 21/195 (10%)

Query: 18  DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKQSGSSVRA 73
               V+VTG + G+G +    LA+ G   +    R     D    L  E+      +  A
Sbjct: 8   PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVA 67

Query: 74  MAVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL 133
                D  +                    + V +A  +    +   LT E      +  +
Sbjct: 68  ACDVTDRESVRE------LLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKV 121

Query: 134 TGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLE 193
            G+  + +                 + S  A++ G  PG   YA   A L+     L+ +
Sbjct: 122 LGARNLHELTRELDLT------AFVLFSSFASAFGA-PGLGGYAPGNAYLDG----LAQQ 170

Query: 194 LGVHKIRVNSICPGL 208
                +   ++  G 
Sbjct: 171 RRSDGLPATAVAWGT 185

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 11/49 (22%), Positives = 23/49 (46%)

Query: 18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQ 66
          +  +V+VTGA+  +       L + G ++   AR   +L +L    + +
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK 58

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 9/40 (22%), Positives = 14/40 (35%)

Query: 19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS 58
           K + V GA+   G       A  G  + A    +  L +
Sbjct: 3  KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA 42

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 60
          K + + GA+   G        +AG  +    R   RL S  
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG 44

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 21/149 (14%)

Query: 20  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-----VDRLKSLCDEINKQSGSSVRAM 74
           KV ++TG +   G      L + G  +    RR      +R+  +  + +  +    +  
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNP---KFH 58

Query: 75  AVELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLT 134
               D+S + + +   +++      + D + N   +S    S      E   +    +  
Sbjct: 59  LHYGDLS-DTSNLTRILRE-----VQPDEVYNLGAMSHVAVS-----FESPEYTADVDAM 107

Query: 135 GSWLVSKYVCIRMRDANQEGSVINISSIA 163
           G+  + +   IR     ++      S+  
Sbjct: 108 GTLRLLE--AIRFLGLEKKTRFYQASTSE 134

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 2/49 (4%)

Query: 18 DNKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEIN 64
          +   V+VTGAS   G+     L +           R     + +  E +
Sbjct: 2  NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 36.8 bits (83), Expect = 0.002
 Identities = 12/50 (24%), Positives = 17/50 (34%)

Query: 19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG 68
           K V VTG +   G    L L   G  +   +     + SL +      G
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADG 57

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (83), Expect = 0.003
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 22  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS 81
           V+VTG S  +G   C+ L + G  ++      +  +S+   I +  G       VE D+ 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT--FVEGDIR 60

Query: 82  ANGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT 131
                 E  + +       ID +++ AG+    +S     E   N++  T
Sbjct: 61  N-----EALMTEILHDH-AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGT 104

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 35.5 bits (80), Expect = 0.004
 Identities = 9/61 (14%), Positives = 18/61 (29%)

Query: 20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELD 79
            +++ GA+  +GR         G       R      +       +S  +  A  V   
Sbjct: 4  SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63

Query: 80 V 80
          +
Sbjct: 64 I 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	280
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.73
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.69
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.68
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.67
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.65
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.65
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.65
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.64
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.64
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.63
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.62
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.62
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.61
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.61
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.61
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.59
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.58
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.57
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.5
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.48
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.34
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.32
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.22
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.15
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.11
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.1
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.91
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.87
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.15
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.08
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.07
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.97
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.95
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.86
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.77
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.76
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.75
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.75
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.74
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.72
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.7
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.69
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.69
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.69
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.68
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.67
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.66
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.62
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.62
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.59
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.58
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.58
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.54
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.52
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.51
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.45
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.44
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.43
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.27
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.24
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.23
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.19
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.15
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.14
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.14
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.13
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.11
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.09
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.09
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.07
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.07
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.06
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.03
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.03
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.01
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.94
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.82
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.81
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.81
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.78
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.72
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.69
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.67
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.6
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.58
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.52
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.49
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.46
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.39
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.37
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.35
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.34
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.33
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.33
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.31
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.28
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.26
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.16
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.14
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.99
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.94
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.93
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.92
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.84
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.72
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.58
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.46
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.35
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.34
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.23
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.21
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.87
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.86
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.68
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.52
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.48
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.47
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.46
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.44
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.42
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.39
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.38
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.33
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.32
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.31
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.26
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.11
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.1
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.92
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.78
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.75
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.73
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.71
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.7
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.68
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.52
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.48
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.48
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.46
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.43
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.34
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.31
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.26
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.22
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.13
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.09
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.03
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.01
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.88
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.79
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.58
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.42
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.33
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.3
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.2
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.01
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.01
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.01
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.98
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.96
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.86
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.77
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.74
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.7
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	91.69
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.61
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.59
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.52
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.43
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.35
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.33
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.05
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.97
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	90.96
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.58
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.43
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.77
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.77
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.77
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	89.62
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.57
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.87
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	88.64
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.37
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	88.23
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	88.09
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.74
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.71
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.59
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	87.43
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	87.42
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.0
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.82
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	86.82
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.68
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.33
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.06
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	85.89
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.72
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.59
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	85.58
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	85.53
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	85.41
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	85.3
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	85.18
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	85.1
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.9
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.8
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.56
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.46
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	84.1
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	84.07
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	83.83
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	83.76
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	83.48
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	83.26
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	83.26
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	83.15
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.07
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	83.06
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	82.96
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.88
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.7
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.43
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.29
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	81.72
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.63
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.3
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.08
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	81.07
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	80.78
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	80.52
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	80.36
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	80.26
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	80.24
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	80.21

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.3e-59  Score=387.55  Aligned_cols=250  Identities=31%  Similarity=0.547  Sum_probs=224.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.++  .++.++.+|++ +.++++++++++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g--~~~~~~~~Dv~-~~~~v~~~~~~~   77 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVS-NYEEVKKLLEAV   77 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC--CcEEEEEccCC-CHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999988877654  36788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||+. ...++.+++.++|++.+++|+.+++.++|+++|+|++++ .|+||+++|..+.. .+.++..
T Consensus        78 ~~~~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~-~~~~~~~  154 (251)
T d1vl8a_          78 KEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEE-VTMPNIS  154 (251)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTC-CCSSSCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhcc-ccCcccc
Confidence            99999999999999985 567888999999999999999999999999999998754 78999999976543 2456778


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+++|+|++|.|++++|||||+|+||+++|++.+.....+...+...+..|++|+++|+ |+|+++.||+|+.
T Consensus       155 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~  233 (251)
T d1vl8a_         155 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFLASEE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGG-GGHHHHHHHHSGG
T ss_pred             chHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999876544333334444558999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ++|+|||+|.||||++.
T Consensus       234 a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         234 AKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hCCCcCcEEEeCcCeeC
Confidence            99999999999999974

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-58  Score=385.49  Aligned_cols=242  Identities=30%  Similarity=0.529  Sum_probs=222.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++..      +...+.+|++ +.++++++++++.
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~Dv~-~~~~v~~~~~~~~   73 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA------NGKGLMLNVT-DPASIESVLEKIR   73 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC------CCcEEEEEec-CHHHhhhhhhhhh
Confidence            68999999999999999999999999999999999999999998888743      6778899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++...
T Consensus        74 ~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~--~~~~~~~  149 (243)
T d1q7ba_          74 AEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTM--GNGGQAN  149 (243)
T ss_dssp             HHTCSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTTCHH
T ss_pred             cccCCcceehhhhhhc-cccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcC--CCCCCHH
Confidence            9999999999999986 557888999999999999999999999999999998765 79999999999887  6788999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|+++|+|++|.|++++|||||+|+||+++|++.+...++. . .......|++|+++|+ |+|+++.||+|+.+
T Consensus       150 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~-~-~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~s  226 (243)
T d1q7ba_         150 YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQ-R-AGILAQVPAGRLGGAQ-EIANAVAFLASDEA  226 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH-H-HHHHTTCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhH-H-HHHHhcCCCCCCCCHH-HHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999999987765432 2 3334458999999999 99999999999999


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      +|+|||+|.||||+++
T Consensus       227 ~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         227 AYITGETLHVNGGMYM  242 (243)
T ss_dssp             TTCCSCEEEESTTSSC
T ss_pred             cCCcCCeEEECCCeEe
Confidence            9999999999999886

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.1e-59  Score=389.99  Aligned_cols=252  Identities=27%  Similarity=0.454  Sum_probs=200.3

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..   .++..+.+|++ +.+++++++++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~---~~~~~~~~Dv~-~~~~v~~~~~~   78 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDAS-LRPEREKLMQT   78 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-SHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEeccCC-CHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999987643   37889999999 78999999999


Q ss_pred             HHHHc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.+++ |++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++
T Consensus        79 ~~~~~~g~idilvnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~--~~~~  154 (259)
T d1xq1a_          79 VSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV--SASV  154 (259)
T ss_dssp             HHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------
T ss_pred             HHHHhCCCccccccccccc-CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccc--cccc
Confidence            99998 7899999999986 457888999999999999999999999999999998755 79999999999876  6678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|+.+|+|++|.|++++|||||+|+||+++|++......++.. +......|++|+++|+ |+|+++.||+|
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~-~~~~~~~pl~R~~~pe-dvA~~v~fL~S  232 (259)
T d1xq1a_         155 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFK-KVVISRKPLGRFGEPE-EVSSLVAFLCM  232 (259)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGG-GGHHHHHHHTS
T ss_pred             cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHH-HHHHhCCCCCCCcCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999999998776544433 3344458999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccCCCCC
Q 023555          253 DSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      +.++|+|||+|.||||+++.|.+
T Consensus       233 ~~s~~iTG~~i~vDGG~s~~g~~  255 (259)
T d1xq1a_         233 PAASYITGQTICVDGGLTVNGFS  255 (259)
T ss_dssp             GGGTTCCSCEEECCCCEEETTEE
T ss_pred             chhcCCcCcEEEeCCCEECCCCC
Confidence            99999999999999999998754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.5e-58  Score=386.91  Aligned_cols=249  Identities=32%  Similarity=0.515  Sum_probs=224.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+..   .++..+.+|++ +.++++++++++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g---~~~~~~~~Dvt-~~~~v~~~~~~~   79 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVT-VESDVINLVQSA   79 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC---CcEEEEEccCC-CHHHHHHHHHHH
Confidence            69999999999999999999999999999999999985 46777888887643   37889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||.. ...++.+++.++|++.+++|+.+++.++|+++|+|.+++.+++||++||..+..  +.+++.
T Consensus        80 ~~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--~~~~~~  156 (261)
T d1geea_          80 IKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLFV  156 (261)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTCH
T ss_pred             HHHhCCCCEeeccceec-CCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc--cCcccc
Confidence            99999999999999986 456788999999999999999999999999999998876566799999998876  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.......+..........|++|+++|+ |+|+++.||+|+.
T Consensus       157 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-diA~~v~fL~S~~  235 (261)
T d1geea_         157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSE  235 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             ccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999876544344444455668999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccCC
Q 023555          255 SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~  272 (280)
                      ++|+|||+|.||||+++.
T Consensus       236 s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         236 ASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             hcCCcCCeEEECCCeeCC
Confidence            999999999999999884

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.7e-58  Score=386.19  Aligned_cols=250  Identities=27%  Similarity=0.471  Sum_probs=225.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ +.++..+.+|++ +.++++++++++.
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~-~~~~~~~~~Dvt-~~~~v~~~~~~~~   78 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVS-DEAQVEAYVTATT   78 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEeccCC-CHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999888876643 447889999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|+||||||+..+..++.+++.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++...
T Consensus        79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~~~~  155 (258)
T d1iy8a_          79 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR--GIGNQSG  155 (258)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--BCSSBHH
T ss_pred             HHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhcc--CCCCchH
Confidence            99999999999999876667888999999999999999999999999999998755 79999999999877  6789999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc------hhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK------KDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      |++||+|+.+|+|++|.|++++|||||+|+||+++|++......      .....+......|++|+++|+ |+|+++.|
T Consensus       156 Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~-dvA~~v~f  234 (258)
T d1iy8a_         156 YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVAF  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999998754321      122223344558999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+|+.++|+|||+|.||||++.
T Consensus       235 L~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         235 LLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HTSGGGTTCCSCEEEESTTTTT
T ss_pred             HhCchhcCCcCceEEcCcchhc
Confidence            9999999999999999999974

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.7e-58  Score=384.03  Aligned_cols=247  Identities=32%  Similarity=0.511  Sum_probs=221.5

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..   .++..+.+|++ +.++++++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g---~~~~~~~~Dvt-~~~~v~~~~~   79 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG---YESSGYAGDVS-KKEEISEVIN   79 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT---CCEEEEECCTT-CHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCC-CHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999999997643   37889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++
T Consensus        80 ~~~~~~g~iDilvnnag~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~--~~~~  155 (251)
T d2c07a1          80 KILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT--GNVG  155 (251)
T ss_dssp             HHHHHCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTT
T ss_pred             HHHHhcCCceeeeeccccc-cccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcC--CCCC
Confidence            9999999999999999986 556788999999999999999999999999999998865 79999999999887  6688


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      ...|++||+|+++|+|++|.|++++|||||+|+||+++|++...... +.. +......|++|+++|+ |+|+++.||+|
T Consensus       156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~-~~~-~~~~~~~pl~R~~~pe-dvA~~v~fL~S  232 (251)
T d2c07a1         156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE-QIK-KNIISNIPAGRMGTPE-EVANLACFLSS  232 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH-HHH-HHHHTTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH-HHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999876532 333 3344558999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCccc
Q 023555          253 DSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~  270 (280)
                      ++++|+|||+|.||||++
T Consensus       233 ~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         233 DKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             GGGTTCCSCEEEESTTSC
T ss_pred             chhCCCcCcEEEECCCcC
Confidence            999999999999999986

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.1e-58  Score=383.43  Aligned_cols=245  Identities=27%  Similarity=0.484  Sum_probs=223.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..   .++.++.+|++ +.++++++++++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g---~~~~~~~~Dvs-~~~~~~~~~~~~   82 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDIT-SEQELSALADFA   82 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC---CcEEEEEccCC-CHHHHHHHHHHH
Confidence            37999999999999999999999999999999999999999999999998753   37888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|++|||||+.. ..+ .+.+.++|++.+++|+.+++.++|+++|+|.+++ +|+||++||..+..  +.+++.
T Consensus        83 ~~~~g~iDilvnnAG~~~-~~~-~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~--~~~~~~  157 (255)
T d1fmca_          83 ISKLGKVDILVNNAGGGG-PKP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--KNINMT  157 (255)
T ss_dssp             HHHHSSCCEEEECCCCCC-CCC-TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTCH
T ss_pred             HHHcCCCCEeeeCCcCCC-CCc-ccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhc--cccccc
Confidence            999999999999999863 334 4789999999999999999999999999998865 78999999998877  678999


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++......++...... ...|++|+++|+ |+|+++.||+|+.
T Consensus       158 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~-~~~pl~R~g~pe-dvA~~v~fL~S~~  235 (255)
T d1fmca_         158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKML-QHTPIRRLGQPQ-DIANAALFLCSPA  235 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHH-HTCSSCSCBCHH-HHHHHHHHHHSGG
T ss_pred             cchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHH-hcCCCCCCcCHH-HHHHHHHHHhCch
Confidence            99999999999999999999999999999999999999987766655544444 458999999999 9999999999999


Q ss_pred             CCcccccEEEeCCccc
Q 023555          255 SEYVSGNIFIVDSGAT  270 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~  270 (280)
                      ++|+|||+|.||||+.
T Consensus       236 s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         236 ASWVSGQILTVSGGGV  251 (255)
T ss_dssp             GTTCCSCEEEESTTSC
T ss_pred             hcCCcCCEEEECcCcc
Confidence            9999999999999984

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=7.1e-58  Score=382.35  Aligned_cols=247  Identities=26%  Similarity=0.441  Sum_probs=224.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++..    ..++.++.+|++ +.++++++++++
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~-~~~~v~~~~~~~   76 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT----PDQIQFFQHDSS-DEDGWTKLFDAT   76 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC----CCcEEEEEccCC-CHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999988888743    337888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||.. ...++.+++.++|++.+++|+.+++.++|+++|+|++++.+|+||++||..+..  +.|+..
T Consensus        77 ~~~~G~iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~--~~~~~~  153 (251)
T d1zk4a1          77 EKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLG  153 (251)
T ss_dssp             HHHHSSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCH
T ss_pred             HHHhCCceEEEeccccc-cccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec--cCCCch
Confidence            99999999999999986 557899999999999999999999999999999998876567999999999876  678899


Q ss_pred             CChhhHHHHHHHHHHHHHH--hCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          175 AYASSKAGLNAMTKCLSLE--LGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~--~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      .|++||+|+.+|+|++|.|  ++++|||||+|+||+++|++.......+...... ...|++|+++|+ |+|+++.||+|
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~pl~R~~~pe-dvA~~v~fL~S  231 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQR-TKTPMGHIGEPN-DIAYICVYLAS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTST-TTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHH-hCCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999998  5689999999999999999987766554443333 348999999999 99999999999


Q ss_pred             CCCCcccccEEEeCCcccC
Q 023555          253 DSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       253 ~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++++|+|||+|.||||++-
T Consensus       232 ~~s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         232 NESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhCCCcCcEEEECccccc
Confidence            9999999999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.4e-58  Score=385.53  Aligned_cols=247  Identities=26%  Similarity=0.459  Sum_probs=222.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.      .++.++.+|++ ++++++++++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~------~~~~~~~~Dvt-~~~~v~~~~~~~   73 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG------PAACAIALDVT-DQASIDRCVAEL   73 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC------TTEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CceEEEEeeCC-CHHHHHHHHHHH
Confidence            46999999999999999999999999999999999999999998888773      36888999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||.. ...++.+++.++|++.+++|+.+++.++|+++|+|.+++++|+||++||..+..  +.++..
T Consensus        74 ~~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~~  150 (256)
T d1k2wa_          74 LDRWGSIDILVNNAALF-DLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR--GEALVG  150 (256)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTCH
T ss_pred             HHHhCCccEEEeecccc-cccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc--cccccc
Confidence            99999999999999986 457888999999999999999999999999999887766679999999999887  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      .|++||+|+++|+|++|.|++++|||||+|+||+++|++......         .+...+......|++|+++|+ |+|+
T Consensus       151 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~-evA~  229 (256)
T d1k2wa_         151 VYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAE-DLTG  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHH-HHHH
T ss_pred             chhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHH-HHHH
Confidence            999999999999999999999999999999999999998754321         112223334458999999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ++.||+|++++|+|||+|.||||++++
T Consensus       230 ~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         230 MAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCchhCCccCceEEECcchhhC
Confidence            999999999999999999999998874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1e-57  Score=380.55  Aligned_cols=246  Identities=26%  Similarity=0.390  Sum_probs=207.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|++++..  .+.+++.   +.++..+.+|++ +.++++++++++
T Consensus         1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~--~~~~~~~---g~~~~~~~~Dvs-~~~~v~~~~~~~   74 (247)
T d2ew8a1           1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA--EAAIRNL---GRRVLTVKCDVS-QPGDVEAFGKQV   74 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH--HHHHHHT---TCCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH--HHHHHHc---CCcEEEEEeeCC-CHHHHHHHHHHH
Confidence            3699999999999999999999999999999999999865322  2233332   347889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++..
T Consensus        75 ~~~~G~iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~--~~~~~~  150 (247)
T d2ew8a1          75 ISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWL--KIEAYT  150 (247)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS--CCSSCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcc--cCcccc
Confidence            99999999999999986 567888999999999999999999999999999998865 79999999999876  678889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+....+...........|++|+++|+ |+|+++.||+|+.
T Consensus       151 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pe-dvA~~v~fL~S~~  229 (247)
T d2ew8a1         151 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGAAAFLASDD  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTH-HHHHHHHHHTSGG
T ss_pred             cchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHH-HHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999876554444444444446899999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ++|+|||+|.||||++.
T Consensus       230 s~~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         230 ASFITGQTLAVDGGMVR  246 (247)
T ss_dssp             GTTCCSCEEEESSSCCC
T ss_pred             hcCCcCCeEEECCCEec
Confidence            99999999999999875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.9e-57  Score=381.44  Aligned_cols=249  Identities=26%  Similarity=0.450  Sum_probs=224.4

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..   .++.++.+|++ +.+++++++++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g---~~~~~~~~Dv~-~~~~v~~~~~~   78 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLS-SRSERQELMNT   78 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT-CHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEEeeCC-CHHHHHHHHHH
Confidence            368999999999999999999999999999999999999999999999987643   47888999999 78999999999


Q ss_pred             HHHHcC-CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAFG-RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.++++ ++|++|||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++
T Consensus        79 ~~~~~~~~idilvnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~  154 (259)
T d2ae2a_          79 VANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGAL--AVPY  154 (259)
T ss_dssp             HHHHTTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTS--CCTT
T ss_pred             HHHHhCCCceEEEECCcee-ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccccccccccc--cccc
Confidence            999887 799999999986 556888999999999999999999999999999998755 79999999999876  6788


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch----hhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK----DWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      ...|++||+|+++|+|++|.|++++|||||+|+||+|+|++.+.....    +...+ .....|++|+++|+ |+|+++.
T Consensus       155 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~~~~pl~R~g~pe-dvA~~v~  232 (259)
T d2ae2a_         155 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNK-LIDRCALRRMGEPK-ELAAMVA  232 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHH-HHHTSTTCSCBCHH-HHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHH-HHhcCCCCCCcCHH-HHHHHHH
Confidence            999999999999999999999999999999999999999997654322    22223 33458999999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ||+|+.++|+|||+|.||||++..
T Consensus       233 fL~S~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         233 FLCFPAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhCchhCCCcCcEEEECCCeEee
Confidence            999999999999999999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.2e-57  Score=381.61  Aligned_cols=247  Identities=29%  Similarity=0.438  Sum_probs=215.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+..+  .++.++.+|++ +.++++++++++.
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~-~~~~v~~~~~~~~   78 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLYDGADLS-KGEAVRGLVDNAV   78 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT--SCEEEECCCTT-SHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC--CcEEEEECCCC-CHHHHHHHHHHHH
Confidence            799999999999999999999999999999999997 4667888888766554  47889999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|+||||||+. ...++.+.+.++|++.|++|+.+++.++|+++|+|++++ .|+||++||..+..  +.+++..
T Consensus        79 ~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~--~~~~~~~  154 (260)
T d1x1ta1          79 RQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV--ASANKSA  154 (260)
T ss_dssp             HHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHH
T ss_pred             HHhCCCcEEEeecccc-cCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeeccccccee--ccCCcch
Confidence            9999999999999986 457888999999999999999999999999999998865 79999999999887  6788999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhhhcCCCCCCCCCChHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRTYPLRDFGTTDPALTS  245 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~p~~~~~~~~~~va~  245 (280)
                      |++||+|+.+|+|++|.|++++|||||+|+||+++|++......          .....+......|++|+++|+ |+|+
T Consensus       155 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-diA~  233 (260)
T d1x1ta1         155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHH-HHHH
T ss_pred             hhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHH-HHHH
Confidence            99999999999999999999999999999999999999765432          112223344558999999999 9999


Q ss_pred             HHHHhhcCCCCcccccEEEeCCcccC
Q 023555          246 LVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++.||+|+.++|+|||+|.||||++.
T Consensus       234 ~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         234 TAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhChhhCCCcCCEEEECcchhc
Confidence            99999999999999999999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.5e-57  Score=374.70  Aligned_cols=238  Identities=34%  Similarity=0.496  Sum_probs=218.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++..      +..++.+|++ ++++++++++++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~-~~~~v~~~~~~~   74 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVT-QPAQWKAAVDTA   74 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTT-CHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhC------cceEEEeecC-CHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999988887743      6788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|++|||||.. ...++.+++.++|++.+++|+.+++.++|+++|+|.+++ .|+||++||..+..  +.+++.
T Consensus        75 ~~~~g~idilinnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~~~  150 (244)
T d1nffa_          75 VTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLA--GTVACH  150 (244)
T ss_dssp             HHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBH
T ss_pred             HHHhCCCeEEEECCccc-CCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccc--cccccc
Confidence            99999999999999986 557888999999999999999999999999999998865 79999999999876  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+++|+|++|.|++++|||||+|+||+++|++.......      . ...|++|+++|+ |+|+++.||+|+.
T Consensus       151 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~------~-~~~pl~R~~~p~-diA~~v~fL~s~~  222 (244)
T d1nffa_         151 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED------I-FQTALGRAAEPV-EVSNLVVYLASDE  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT------C-SCCSSSSCBCHH-HHHHHHHHHHSGG
T ss_pred             chhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH------H-HhccccCCCCHH-HHHHHHHHHhChh
Confidence            9999999999999999999999999999999999999997654221      2 237999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ++|+|||+|.||||++.
T Consensus       223 s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         223 SSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hCCCcCCEEEECCCeec
Confidence            99999999999999974

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=4.2e-57  Score=379.71  Aligned_cols=246  Identities=28%  Similarity=0.442  Sum_probs=221.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.   +.++..+.+|++ +.++++++++++
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---g~~~~~~~~Dv~-~~~~v~~~~~~~   76 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK---GVEARSYVCDVT-SEEAVIGTVDSV   76 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TSCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCC-CHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999998764   347889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|++|||||......++.+++.++|++.+++|+.+++.++|+++|+|.+++ .|+||++||..+..  +.+++.
T Consensus        77 ~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~--~~~~~~  153 (260)
T d1zema1          77 VRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVK--GPPNMA  153 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHS--CCTTBH
T ss_pred             HHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhcc--CCcchH
Confidence            999999999999999875667888999999999999999999999999999998755 79999999999877  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc--------------chhhhhhhhhcCCCCCCCCCCh
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM--------------KKDWLNNVASRTYPLRDFGTTD  240 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~--------------~~~~~~~~~~~~~p~~~~~~~~  240 (280)
                      .|++||+|+++|+|++|.|++++|||||+|+||+++|++.....              ..+...+......|++|+++|+
T Consensus       154 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  233 (260)
T d1zema1         154 AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence            99999999999999999999999999999999999999753211              1122333334458999999999


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                       |+|+++.||+|+.++|+|||+|.||||
T Consensus       234 -dvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         234 -EIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -HHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             999999999999999999999999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=4.9e-57  Score=378.38  Aligned_cols=246  Identities=26%  Similarity=0.424  Sum_probs=221.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|++|||||++|||+++|++|+++|++|++++|++++++++.+++++..   .++.++.+|++ +.++++++++++.++|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g---~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVS-DRDQVFAAVEQARKTL   76 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-SHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCC-CHHHHHHHHHHHHHHh
Confidence            3788999999999999999999999999999999999999999998753   37888999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      |++|+||||||+. ...++.+++.++|++.+++|+.++++++|+++|+|.+++.+++||++||..+..  +.+++..|++
T Consensus        77 g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~a  153 (255)
T d1gega_          77 GGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSS  153 (255)
T ss_dssp             TCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHHH
T ss_pred             CCccEEEeccccc-ccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc--cCcccccchh
Confidence            9999999999986 557888999999999999999999999999999988877678999999998876  6789999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch---------hhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK---------DWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ||+|+++|+|++|.|++++|||||+|+||+++|++.......         ........+..|++|+++|+ |+|+++.|
T Consensus       154 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-evA~~v~f  232 (255)
T d1gega_         154 SKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVSY  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH-HHHHHHHH
T ss_pred             CHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            999999999999999999999999999999999987654221         11222334558999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+|+.++|+|||+|.||||+.+.
T Consensus       233 L~S~~a~~itG~~i~vDGG~~~n  255 (255)
T d1gega_         233 LASPDSDYMTGQSLLIDGGMVFN  255 (255)
T ss_dssp             HHSGGGTTCCSCEEEESSSSSCC
T ss_pred             HhCchhCCccCcEEEecCCEEeC
Confidence            99999999999999999998763

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.1e-57  Score=374.54  Aligned_cols=240  Identities=32%  Similarity=0.524  Sum_probs=214.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++        ...++.+|++ +.++++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~--------~~~~~~~Dv~-~~~~v~~~~~~~   71 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHPVVMDVA-DPASVERGFAEA   71 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------TCEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------CCeEEEEecC-CHHHHHHHHHHH
Confidence            4699999999999999999999999999999999999999888876654        3567899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|.+++ .+.++++||.. ..  +.+++.
T Consensus        72 ~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~-~~--~~~~~~  146 (242)
T d1ulsa_          72 LAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YL--GNLGQA  146 (242)
T ss_dssp             HHHHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GG--CCTTCH
T ss_pred             HHhcCCceEEEECCccc-ccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecccc-cc--CCCCCc
Confidence            99999999999999986 457888999999999999999999999999999998744 67777777743 33  567889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|++||+|+++|+|++|.|++++|||||+|+||+++|++..... +.. .+......|++|+++|+ |+|+++.||+|++
T Consensus       147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~-~~~-~~~~~~~~pl~R~~~pe-dia~~v~fL~S~~  223 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP-EKV-REKAIAATPLGRAGKPL-EVAYAALFLLSDE  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC-HHH-HHHHHHTCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC-HHH-HHHHHhcCCCCCCCCHH-HHHHHHHHHhchh
Confidence            99999999999999999999999999999999999999987653 223 33344458999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ++|+|||+|.||||+++
T Consensus       224 s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         224 SSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hCCCCCcEEEECCCccC
Confidence            99999999999999986

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3.4e-57  Score=378.08  Aligned_cols=243  Identities=33%  Similarity=0.429  Sum_probs=219.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++.      .++.++.+|++ +.++++++++++
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~-~~~~v~~~~~~~   73 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG------DAARYQHLDVT-IEEDWQRVVAYA   73 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG------GGEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CceEEEEcccC-CHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999888877653      37889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++..
T Consensus        74 ~~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~--~~~~~~  149 (254)
T d1hdca_          74 REEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM--GLALTS  149 (254)
T ss_dssp             HHHHSCCCEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCH
T ss_pred             HHHcCCccEEEecCccc-cccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcc--cccchh
Confidence            99999999999999986 557888999999999999999999999999999998765 79999999999877  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCC-CChHHHHHHHHHhhcC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG-TTDPALTSLVRYLVHD  253 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~va~~~~~l~s~  253 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++......+.  .+......|++|++ .|+ |+|+++.||+|+
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~--~~~~~~~~pl~R~g~~Pe-dvA~~v~fL~S~  226 (254)
T d1hdca_         150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ--GEGNYPNTPMGRVGNEPG-EIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC--STTSCTTSTTSSCB-CHH-HHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH--HHHHHhCCCCCCCCCCHH-HHHHHHHHHhch
Confidence            99999999999999999999999999999999999999876543221  12233448999998 577 999999999999


Q ss_pred             CCCcccccEEEeCCcccC
Q 023555          254 SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
                      .++|+|||+|.||||++.
T Consensus       227 ~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         227 TSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             hhCCCCCceEEeCCCccC
Confidence            999999999999999976

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-57  Score=377.29  Aligned_cols=242  Identities=27%  Similarity=0.454  Sum_probs=216.5

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.       ...++.+|++ +.++++++++++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-------~~~~~~~Dvs-~~~~v~~~~~~~   73 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVT-QEDDVKTLVSET   73 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-------CCeEEEccCC-CHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999998888776652       4678899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||......++.+.+.++|++.+++|+.+++.++|+++|+|+++  +|+||++||..+..  +.++..
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~--~~~~~~  149 (250)
T d1ydea1          74 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAI--GQAQAV  149 (250)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHH--CCTTCH
T ss_pred             HHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccc--cccCcc
Confidence            99999999999999986555677889999999999999999999999999999864  58999999999877  668899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----c-hhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----K-KDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+...    . .....+.. ...|++|+++|+ |+|+++.|
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~pl~R~g~p~-eva~~v~f  227 (250)
T d1ydea1         150 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM-LAQPLGRMGQPA-EVGAAAVF  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH-HTSTTSSCBCHH-HHHHHHHH
T ss_pred             hhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHH-hcCCCCCCCCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999999875432    1 12233333 347999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+|+ ++|+|||+|.||||+++
T Consensus       228 L~Sd-a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         228 LASE-ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHH-CTTCCSCEEEESTTTTS
T ss_pred             HhCc-cCCCcCCeEEECCCccc
Confidence            9996 78999999999999986

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-56  Score=373.41  Aligned_cols=242  Identities=27%  Similarity=0.456  Sum_probs=213.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++        ...++.+|++ +.++++++++++.
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~--------~~~~~~~Dv~-~~~~v~~~~~~~~   71 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI--------GGAFFQVDLE-DERERVRFVEEAA   71 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH--------TCEEEECCTT-CHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc--------CCeEEEEeCC-CHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999977543 33433        3456799999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||+++|..+..  +.++...
T Consensus        72 ~~~G~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~--~~~~~~~  147 (248)
T d2d1ya1          72 YALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLF--AEQENAA  147 (248)
T ss_dssp             HHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS--BCTTBHH
T ss_pred             HhcCCCCeEEEeCcCC-CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccc--cccccch
Confidence            9999999999999987 457888999999999999999999999999999998754 79999999999877  6789999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----chhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      |++||+|+++|+|++|.|++++|||||+|+||+++|++.....    ..+...+......|++|+++|+ |+|+++.||+
T Consensus       148 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dia~~v~fL~  226 (248)
T d2d1ya1         148 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLA  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHH-HHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            9999999999999999999999999999999999999865332    1223334445568999999999 9999999999


Q ss_pred             cCCCCcccccEEEeCCcccCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      |+.++|+|||+|.||||++.+
T Consensus       227 S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         227 SEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             SGGGTTCCSCEEEESTTGGGB
T ss_pred             CchhcCCCCcEEEcCcCcccc
Confidence            999999999999999999753

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.2e-56  Score=376.47  Aligned_cols=244  Identities=30%  Similarity=0.475  Sum_probs=218.7

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..   .++.++.+|++ +.++++++++++.++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g---~~~~~~~~Dvs-~~~~v~~~~~~~~~~   76 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVR-SVPEIEALVAAVVER   76 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeecC-CHHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999999999999999997643   47889999999 789999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--HHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIR--MRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +|++|+||||||.. ...++.+++.++|++.+++|+.++++++|+++|+  |.++ +.|+||+++|..+..  +.+++..
T Consensus        77 ~g~iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-~~g~Ii~i~S~~~~~--~~~~~~~  152 (257)
T d2rhca1          77 YGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIASTGGKQ--GVVHAAP  152 (257)
T ss_dssp             TCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-TEEEEEEECCGGGTS--CCTTCHH
T ss_pred             hCCCCEEEeccccc-CCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-CCccccccccccccc--ccccchh
Confidence            99999999999986 4578889999999999999999999999999997  4443 368999999998877  6789999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      |++||+|+.+|+|++|.|++++|||||+|+||+++|+|.+....         .+...+......|++|+++|+ |+|++
T Consensus       153 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pe-dia~~  231 (257)
T d2rhca1         153 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS-EVAEM  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHH-HHHHH
Confidence            99999999999999999999999999999999999998754321         122233344558999999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCccc
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +.||+|+.++|+|||+|.||||+.
T Consensus       232 v~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         232 VAYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHhCchhcCCcCceEEECcCcc
Confidence            999999999999999999999974

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-56  Score=371.66  Aligned_cols=234  Identities=27%  Similarity=0.467  Sum_probs=204.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++              ++..+.+|++ +.++++++++++.
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--------------~~~~~~~Dv~-~~~~v~~~~~~~~   68 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVT-DSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc--------------CceEEEEecC-CHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999865432              4667899999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|+||||||.. ...++.+.+.|+|++.+++|+.+++.++|+++|+|.+++ .|+||++||..+..  +.++...
T Consensus        69 ~~~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~--~~~~~~~  144 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLW--GIGNQAN  144 (237)
T ss_dssp             HHHSSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------CCHH
T ss_pred             HhcCCceEEEeeeccc-ccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhcc--CCcccHH
Confidence            9999999999999986 557888999999999999999999999999999998855 78999999999876  6688999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|+++|+|++|.|++++|||||+|+||+++|++.+... +.. .+......|++|+++|+ |+|+++.||+|+++
T Consensus       145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-~~~-~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~s  221 (237)
T d1uzma1         145 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD-ERI-QQGALQFIPAKRVGTPA-EVAGVVSFLASEDA  221 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-HHH-HHHHGGGCTTCSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC-HHH-HHHHHhcCCCCCCcCHH-HHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999999987543 222 33344458999999999 99999999999999


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      +|+|||+|.+|||+++
T Consensus       222 ~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         222 SYISGAVIPVDGGMGM  237 (237)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCCcCCeEEECCCCCC
Confidence            9999999999999865

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4e-56  Score=370.05  Aligned_cols=241  Identities=31%  Similarity=0.546  Sum_probs=217.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEe-cChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++|||||++|||+++|++|+++|++|++++ |+++.++++.+++++..   .++.++.+|++ +.++++++++++.+++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   77 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG---GQAITFGGDVS-KEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT---CEEEEEECCTT-SHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC---CcEEEEeCCCC-CHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999875 56777888888887643   37889999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChh
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYAS  178 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~  178 (280)
                      |++|+||||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++...|++
T Consensus        78 g~iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~--~~~~~~~Y~a  153 (244)
T d1edoa_          78 GTIDVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI--GNIGQANYAA  153 (244)
T ss_dssp             SCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTCHHHHH
T ss_pred             CCCCccccccccc-cccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcC--CCCCCHHHHH
Confidence            9999999999986 557888999999999999999999999999999998755 79999999999887  6788999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh-cCCCCc
Q 023555          179 SKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV-HDSSEY  257 (280)
Q Consensus       179 sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~-s~~~~~  257 (280)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|++..... ++.. +......|++|+++|+ |+|+++.||+ |++++|
T Consensus       154 sKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-~~~~-~~~~~~~pl~R~~~p~-dvA~~v~fLa~S~~a~~  230 (244)
T d1edoa_         154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG-EDME-KKILGTIPLGRTGQPE-NVAGLVEFLALSPAASY  230 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-HHHH-HHHHTSCTTCSCBCHH-HHHHHHHHHHHCSGGGG
T ss_pred             HHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh-HHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHHCCchhcC
Confidence            9999999999999999999999999999999999987653 2333 3344558999999999 9999999996 899999


Q ss_pred             ccccEEEeCCcccC
Q 023555          258 VSGNIFIVDSGATL  271 (280)
Q Consensus       258 i~G~~i~vdgG~~~  271 (280)
                      +|||+|.+|||+++
T Consensus       231 itG~~i~vdGG~si  244 (244)
T d1edoa_         231 ITGQAFTIDGGIAI  244 (244)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCCeEEeCCCeeC
Confidence            99999999999875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.8e-56  Score=371.63  Aligned_cols=241  Identities=30%  Similarity=0.469  Sum_probs=213.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.       .+..+.+|++ +.+++++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-------~~~~~~~Dv~-~~~~v~~----~   68 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-------GIEPVCVDLG-DWDATEK----A   68 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTT-CHHHHHH----H
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-------CCeEEEEeCC-CHHHHHH----H
Confidence            47999999999999999999999999999999999999998888776652       4667889999 6666655    4


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||+. ...++.+++.++|++.+++|+.+++.++|+++|.|.+++.+|+||+++|..+..  +.|+..
T Consensus        69 ~~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~  145 (242)
T d1cyda_          69 LGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLI  145 (242)
T ss_dssp             HTTCCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBH
T ss_pred             HHHcCCCeEEEECCccc-cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc--cCCccc
Confidence            56789999999999986 457888999999999999999999999999999887766689999999998876  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|+|+.+|+|++|.|++++|||||+|+||+++|++.+.....+...+......|++|+++|+ |+|+++.||+|+.
T Consensus       146 ~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-eva~~v~fL~S~~  224 (242)
T d1cyda_         146 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             cccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999876554443344444558999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccC
Q 023555          255 SEYVSGNIFIVDSGATL  271 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~  271 (280)
                      ++|+|||+|.||||++-
T Consensus       225 s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         225 SASTSGGGILVDAGYLA  241 (242)
T ss_dssp             GTTCCSSEEEESTTGGG
T ss_pred             hcCcCCceEEeCcchhc
Confidence            99999999999999874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.6e-56  Score=376.10  Aligned_cols=258  Identities=26%  Similarity=0.408  Sum_probs=223.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+......++.++.+|++ +.++++++++++.
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~   79 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT-EASGQDDIINTTL   79 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCC-CHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999887666668999999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      +++|++|++|||||..... ....+.+.|+|++.+++|+.+++.++|+++|+|.+++ +|+|+++||..+..  +.+++.
T Consensus        80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~--~~~~~~  156 (274)
T d1xhla_          80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ--AHSGYP  156 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS--CCTTSH
T ss_pred             HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccc--cCCCCc
Confidence            9999999999999975333 2445678999999999999999999999999998754 78888888877765  668889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch----hhhh---hhhhcCCCCCCCCCChHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK----DWLN---NVASRTYPLRDFGTTDPALTSLV  247 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~----~~~~---~~~~~~~p~~~~~~~~~~va~~~  247 (280)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.......    +...   .......|++|+++|+ |+|+++
T Consensus       157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pe-diA~~v  235 (274)
T d1xhla_         157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIANII  235 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HHHHHH
T ss_pred             eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHH-HHHHHH
Confidence            9999999999999999999999999999999999999987544211    1111   1223457999999999 999999


Q ss_pred             HHhhcC-CCCcccccEEEeCCcccCC-CCCCCC
Q 023555          248 RYLVHD-SSEYVSGNIFIVDSGATLP-GLPIFS  278 (280)
Q Consensus       248 ~~l~s~-~~~~i~G~~i~vdgG~~~~-~~~~~~  278 (280)
                      .||+|+ .++|+|||+|.||||+++. |+++.|
T Consensus       236 ~fL~S~d~s~~itG~~i~vDGG~~l~~g~~~~~  268 (274)
T d1xhla_         236 VFLADRNLSSYIIGQSIVADGGSTLVMGMQTHD  268 (274)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSC
T ss_pred             HHHcCCccccCccCcEEEeCcCHHHhcCCCccc
Confidence            999995 6899999999999999764 555443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=2.7e-55  Score=370.49  Aligned_cols=251  Identities=25%  Similarity=0.400  Sum_probs=219.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..    ...+.++.+|++ +.++++++++++
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~----~~~~~~~~~Dv~-~~~~v~~~~~~~   76 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----PDVISFVHCDVT-KDEDVRNLVDTT   76 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC----CCceEEEEccCC-CHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999888853    235778899999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC-
Q 023555           95 WEAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG-  172 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~-  172 (280)
                      .+++|++|++|||||..... ..+.+.+.++|++.+++|+.+++.++|+++|+|.+++ .|++|+++|..+..  +.++ 
T Consensus        77 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~--~~~~~  153 (268)
T d2bgka1          77 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFT--AGEGV  153 (268)
T ss_dssp             HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTC--CCTTS
T ss_pred             HHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccc--ccccc
Confidence            99999999999999986433 3577899999999999999999999999999998754 79999999988865  3344 


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--hhhhhhh-hhcCCCCCCCCCChHHHHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--KDWLNNV-ASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--~~~~~~~-~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ...|++||+|+++|+|++|.||+++|||||+|+||+++|++......  .....+. .....|++|+++|+ |+|+++.|
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe-dvA~~v~f  232 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVAY  232 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH-HHHHHHHH
T ss_pred             ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHH-HHHHHHHH
Confidence            34799999999999999999999999999999999999999876542  2222222 22346889999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      |+|++++|+|||+|.||||++....
T Consensus       233 L~S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         233 LAGDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             HhChhhCCccCceEEECcCcccCCC
Confidence            9999999999999999999987653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-56  Score=368.94  Aligned_cols=239  Identities=29%  Similarity=0.441  Sum_probs=213.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.       .+..+.+|++ +.++++++    .
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-------~~~~~~~Dv~-d~~~v~~~----~   71 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------GIEPVCVDLG-DWEATERA----L   71 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTT-CHHHHHHH----H
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-------CCeEEEEeCC-CHHHHHHH----H
Confidence            6899999999999999999999999999999999999999888877653       3567889999 66666554    4


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|.+++..|+||++||..+..  +.++...
T Consensus        72 ~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~--~~~~~~~  148 (244)
T d1pr9a_          72 GSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHSV  148 (244)
T ss_dssp             TTCCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHH
T ss_pred             HHhCCceEEEeccccc-cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc--cccchhh
Confidence            5689999999999986 457888999999999999999999999999999876656689999999999877  6788999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |++||+|+++|+|++|.|++++|||||+|+||+++|++.+....+....+......|++|+++|+ |+|+++.||+|+.+
T Consensus       149 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-evA~~v~fL~S~~a  227 (244)
T d1pr9a_         149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSGGG
T ss_pred             hhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999876655444444445568999999999 99999999999999


Q ss_pred             CcccccEEEeCCccc
Q 023555          256 EYVSGNIFIVDSGAT  270 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~  270 (280)
                      +|+|||+|.||||++
T Consensus       228 ~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         228 GMTTGSTLPVEGGFW  242 (244)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCcCCcEEEECccHh
Confidence            999999999999986

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.4e-56  Score=373.52  Aligned_cols=250  Identities=26%  Similarity=0.435  Sum_probs=210.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+......++.++.+|++ +.++++++++++.
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt-~~~~v~~~~~~~~   80 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT-TDAGQDEILSTTL   80 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCC-CHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999999887666667999999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccc-ccCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAA-TSRGQLP  171 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~-~~~~~~~  171 (280)
                      +++|++|+||||||...+   ..++.+.+.|+|++.+++|+.+++.++|+++|+|+++  .|++|+++|..+ ..  +.+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S~~~~~~--~~~  156 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLH--ATP  156 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTTSSSS--CCT
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceeeeeeccccc--cCC
Confidence            999999999999997532   2345677999999999999999999999999999875  467777777554 44  668


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-------hhhhhhhcCCCCCCCCCChHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-------WLNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      ++..|++||+|+++|+|++|.|++++|||||+|+||+++|++.......+       ..........|++|+++|+ |+|
T Consensus       157 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-dvA  235 (264)
T d1spxa_         157 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DIA  235 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH-HHH
T ss_pred             CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHH-HHH
Confidence            88999999999999999999999999999999999999999876543211       1112233448999999999 999


Q ss_pred             HHHHHhhcC-CCCcccccEEEeCCcccC
Q 023555          245 SLVRYLVHD-SSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       245 ~~~~~l~s~-~~~~i~G~~i~vdgG~~~  271 (280)
                      +++.||+|+ .++|+|||+|.||||+++
T Consensus       236 ~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         236 EVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCCcccCCccCceEEeCCChhh
Confidence            999999995 589999999999999987

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.6e-56  Score=372.26  Aligned_cols=247  Identities=25%  Similarity=0.319  Sum_probs=218.6

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.      .+..++.+|++ +.++++++++++
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~-~~~~~~~~~~~~   74 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG------ERSMFVRHDVS-SEADWTLVMAAV   74 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC------TTEEEECCCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CCeEEEEeecC-CHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999888773      26788999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|+++  +|+||++||..+..  +.++..
T Consensus        75 ~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~--~~~~~~  149 (253)
T d1hxha_          75 QRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWL--PIEQYA  149 (253)
T ss_dssp             HHHHCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTS--CCTTBH
T ss_pred             HHHhCCCCeEEeccccc-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhc--Cccccc
Confidence            99999999999999986 44688899999999999999999999999999999653  69999999999877  678899


Q ss_pred             CChhhHHHHHHHHHHHHHHhCC--CCeEEEEeecCcccCccccCccchhhhhhh---hhcCCCCCCCCCChHHHHHHHHH
Q 023555          175 AYASSKAGLNAMTKCLSLELGV--HKIRVNSICPGLFKSEITEGLMKKDWLNNV---ASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~--~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .|++||+|+.+|+|++|.|+++  +|||||+|+||+++|++.+...++....+.   .....|++|+++|+ |+|+++.|
T Consensus       150 ~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe-dvA~~v~f  228 (253)
T d1hxha_         150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLF  228 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH-HHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH-HHHHHHHH
Confidence            9999999999999999999987  469999999999999987544332222222   22335788999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      |+|++++|+|||+|.||||+.-.|+
T Consensus       229 L~S~~s~~itG~~i~VDGG~~~~g~  253 (253)
T d1hxha_         229 LASDESSVMSGSELHADNSILGMGL  253 (253)
T ss_dssp             HHSGGGTTCCSCEEEESSSCTTTTC
T ss_pred             HhChhhCCCcCcEEEECccHhhCcC
Confidence            9999999999999999999876664

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=4.1e-55  Score=366.82  Aligned_cols=249  Identities=30%  Similarity=0.485  Sum_probs=219.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..   ..+.++.+|++ +.++++++++++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~---~~~~~~~~D~s-~~~~~~~~~~~~   77 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLL-SRTERDKLMQTV   77 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEEeecC-CHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999887643   36788899999 789999999999


Q ss_pred             HHHc-CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           95 WEAF-GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        95 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      .+.+ +.+|++|||||.. ...++.+++.++|++.+++|+.+++.+.++++|+|.++. .|+||++||..+..  +.+++
T Consensus        78 ~~~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~--~~~~~  153 (258)
T d1ae1a_          78 AHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFS--ALPSV  153 (258)
T ss_dssp             HHHTTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTS--CCTTC
T ss_pred             HHHhCCCcEEEecccccc-ccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccccc--ccccc
Confidence            9998 6899999999986 456888999999999999999999999999999998865 89999999999877  67899


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-----hhhhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      ..|+++|+|+++|+|.+|+|++++|||||+|+||+++|++......     .+...... ...|++|+++|+ |+|+++.
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~plgR~~~pe-diA~~v~  231 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI-VKTPMGRAGKPQ-EVSALIA  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH-HHSTTCSCBCHH-HHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHH-hcCCCCCCcCHH-HHHHHHH
Confidence            9999999999999999999999999999999999999998765532     23333333 348999999999 9999999


Q ss_pred             HhhcCCCCcccccEEEeCCcccCCC
Q 023555          249 YLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      ||+|++++|+|||+|.||||++..|
T Consensus       232 fL~S~~s~~itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         232 FLCFPAASYITGQIIWADGGFTANG  256 (258)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHhChhhCCCcCcEEEeCCCeeccC
Confidence            9999999999999999999999876

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.3e-55  Score=373.02  Aligned_cols=251  Identities=27%  Similarity=0.436  Sum_probs=216.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+......++.++.+|++ +.++++++++++.
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs-~~~~v~~~~~~~~   80 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT-TEDGQDQIINSTL   80 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCC-CHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999876555668999999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec-cccccCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAV---KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS-IAATSRGQLP  171 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS-~~~~~~~~~~  171 (280)
                      +++|++|++|||||...+.   ....+.+.++|++.+++|+.+++.++|+++|+|+++  +|++|+++| ..+..  +.+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~Ss~a~~~--~~~  156 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVAGPQ--AQP  156 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSS--CCC
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc--CCccccccchhcccc--CCC
Confidence            9999999999999986432   122467888999999999999999999999999874  356666665 44555  668


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhh-------hhhhhhcCCCCCCCCCChHHHH
Q 023555          172 GGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDW-------LNNVASRTYPLRDFGTTDPALT  244 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~-------~~~~~~~~~p~~~~~~~~~~va  244 (280)
                      ++..|++||+|+.+|+|++|.|++++|||||+|+||+|+|++.......+.       .........|++|+++|+ |+|
T Consensus       157 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-diA  235 (272)
T d1xkqa_         157 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HIA  235 (272)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HHH
T ss_pred             CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHH-HHH
Confidence            899999999999999999999999999999999999999999765432111       112233458999999999 999


Q ss_pred             HHHHHhhcCC-CCcccccEEEeCCcccCC
Q 023555          245 SLVRYLVHDS-SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       245 ~~~~~l~s~~-~~~i~G~~i~vdgG~~~~  272 (280)
                      +++.||+|++ +.|+|||+|.||||+++.
T Consensus       236 ~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         236 NIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            9999999975 579999999999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.8e-55  Score=369.99  Aligned_cols=249  Identities=28%  Similarity=0.442  Sum_probs=221.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++..+.+|++ +.++++++++++.
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~-~~~~v~~~~~~~~   82 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQCDVS-NTDIVTKTIQQID   82 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT--CCEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC--CceEEEEccCC-CHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999998888876654  36888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----CC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----QL  170 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----~~  170 (280)
                      +++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|.+++..|+|++++|.......     +.
T Consensus        83 ~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          83 ADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             HHSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             HHhCCCcEeccccccc-ccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            9999999999999986 55788899999999999999999999999999999777767888888886654311     22


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ++...|++||+|+.+|+|++|.|++++|||||+|+||+++|++..... ++. .+......|++|+++|+ |+|+++.||
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-~~~-~~~~~~~~pl~R~g~pe-dvA~~v~fL  238 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-KKI-RDHQASNIPLNRFAQPE-EMTGQAILL  238 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-HHH-HHHHHHTCTTSSCBCGG-GGHHHHHHH
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC-HHH-HHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            567889999999999999999999999999999999999999987653 233 33344558999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccC
Q 023555          251 VHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      +|++++|+|||+|.||||+++
T Consensus       239 ~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         239 LSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hcchhCCCcCceEEECCCeec
Confidence            999999999999999999975

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-55  Score=372.71  Aligned_cols=253  Identities=26%  Similarity=0.508  Sum_probs=224.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC--CCcceEEEEeccCCCHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG--SSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...  .+.++..+.+|++ +.++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs-~~~~v~~~~~   86 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR-NEEEVNNLVK   86 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT-CHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCC-CHHHHHHHHH
Confidence            579999999999999999999999999999999999999999999999976543  2457899999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+.+|++|+||||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|.+++ .|+||++|+.. ..  ..++
T Consensus        87 ~~~~~~G~iDiLVnnAg~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~-~~--~~~~  161 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KA--GFPL  161 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TT--CCTT
T ss_pred             HHHHHhCCeEEEEeecccc-ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccc-cc--cccc
Confidence            9999999999999999986 567888999999999999999999999999999998765 78899887643 33  5678


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---hhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ...|++||+|+.+|+|++|.|++++|||||+|+||+++|++......   +++... .....|++|+++|+ |+|+++.|
T Consensus       162 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~-~~~~~plgR~g~pe-dvA~~v~f  239 (297)
T d1yxma1         162 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG-SFQKIPAKRIGVPE-EVSSVVCF  239 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTT-GGGGSTTSSCBCTH-HHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHH-HHhcCCCCCCcCHH-HHHHHHHH
Confidence            89999999999999999999999999999999999999998754432   223333 33448999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLP  275 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
                      |+|+.++|+|||+|.||||+++.+.+
T Consensus       240 L~Sd~s~~iTG~~i~VDGG~sl~~~~  265 (297)
T d1yxma1         240 LLSPAASFITGQSVDVDGGRSLYTHS  265 (297)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCBTT
T ss_pred             HhCchhcCcCCcEEEeCcChhhhcCC
Confidence            99999999999999999999986544

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.8e-55  Score=368.23  Aligned_cols=238  Identities=21%  Similarity=0.269  Sum_probs=210.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++......         +..+|++ +.++++++++++.++||+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~---------~~~~dv~-~~~~~~~~~~~~~~~~G~   71 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET---------YPQLKPM-SEQEPAELIEAVTSAYGQ   71 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH---------CTTSEEC-CCCSHHHHHHHHHHHHSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc---------EEEeccC-CHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999998888776543322         2357888 568899999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhH
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSK  180 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK  180 (280)
                      +|+||||||......++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..  +.++...|++||
T Consensus        72 iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~--~~~~~~~Y~asK  148 (252)
T d1zmta1          72 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG--PWKELSTYTSAR  148 (252)
T ss_dssp             CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS--CCTTCHHHHHHH
T ss_pred             CCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccc--cccccccccccc
Confidence            999999999865567888999999999999999999999999999998765 79999999999876  678889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch------hhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          181 AGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK------DWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       181 ~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      +|+++|+|++|.|++++|||||+|+||+++|++.......      +...+...+..|++|+++|+ |+|+++.||+|+.
T Consensus       149 aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pe-dvA~~v~fL~S~~  227 (252)
T d1zmta1         149 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASGS  227 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHH-HHHHHHHHHHTTS
T ss_pred             ccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCch
Confidence            9999999999999999999999999999999998765321      12223344558999999999 9999999999999


Q ss_pred             CCcccccEEEeCCcccCC
Q 023555          255 SEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       255 ~~~i~G~~i~vdgG~~~~  272 (280)
                      ++|+|||+|.||||+++-
T Consensus       228 s~~iTG~~i~vdGG~~~~  245 (252)
T d1zmta1         228 CDYLTGQVFWLAGGFPMI  245 (252)
T ss_dssp             CGGGTTCEEEESTTCCCC
T ss_pred             hcCCcCCeEEECCCceeC
Confidence            999999999999999874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.2e-54  Score=364.39  Aligned_cols=247  Identities=21%  Similarity=0.332  Sum_probs=215.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.      .++..+.+|++ +.++++++++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~------~~~~~~~~Dv~-~~~~~~~~~~~~   73 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG------DNVLGIVGDVR-SLEDQKQAASRC   73 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------CCeeEEecccc-cHHHHHHHHHHH
Confidence            46999999999999999999999999999999999999999988877763      37889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVK----SPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      .+++|++|++|||||+.....    .+.+.+.++|++.|++|+.+++.++|+++|+|+++  +|++|+++|..+..  +.
T Consensus        74 ~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i~S~~~~~--~~  149 (276)
T d1bdba_          74 VARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFY--PN  149 (276)
T ss_dssp             HHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTS--TT
T ss_pred             HHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceeeeechhcc--CC
Confidence            999999999999999864332    23455567899999999999999999999999875  48999999988876  66


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc--------hhhhhhhhhcCCCCCCCCCChHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK--------KDWLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      ++...|++||+|+.+|+|++|.|++++ ||||+|+||+|+|++......        .+...+......|++|+++|+ |
T Consensus       150 ~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-e  227 (276)
T d1bdba_         150 GGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE-E  227 (276)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG-G
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH-H
Confidence            888999999999999999999999975 999999999999998654321        122334455668999999999 9


Q ss_pred             HHHHHHHhhcC-CCCcccccEEEeCCcccCCCC
Q 023555          243 LTSLVRYLVHD-SSEYVSGNIFIVDSGATLPGL  274 (280)
Q Consensus       243 va~~~~~l~s~-~~~~i~G~~i~vdgG~~~~~~  274 (280)
                      +|+++.||+|+ .++|+|||+|.||||+++.|.
T Consensus       228 va~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~  260 (276)
T d1bdba_         228 YTGAYVFFATRGDAAPATGALLNYDGGLGVRGF  260 (276)
T ss_dssp             GSHHHHHHHCHHHHTTCSSCEEEESSSGGGCCS
T ss_pred             HHHHHHHHcCCcccCCeeCcEEEECcChhhcce
Confidence            99999999984 689999999999999998653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.2e-54  Score=361.08  Aligned_cols=247  Identities=21%  Similarity=0.310  Sum_probs=208.3

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      +|+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+. .+..+   ....+.+|++ +.+++++++++
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~-~~~~~---~~~~~~~D~~-~~~~v~~~~~~   79 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKL-AEALG---GALLFRADVT-QDEELDALFAG   79 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-HHHTT---CCEEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHh-hhccC---cccccccccC-CHHHHHHHHHH
Confidence            79999999999987  999999999999999999999987655554433 33322   5667899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+++|++|++|||||....   ..++.+.+.++|+..+++|+.+++.++|++.|+|++   +|+||++||..+..  +.
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~--~~  154 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEK--VV  154 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTS--BC
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcC--CC
Confidence            99999999999999997532   235567889999999999999999999999998865   58999999999876  67


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|+++|+|++|.|++++|||||+|+||+++|++.......+...+...+..|++|+++|+ |+|+++.||
T Consensus       155 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL  233 (256)
T d1ulua_         155 PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLFL  233 (256)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            8899999999999999999999999999999999999999998776544343444444558999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +|++++|+|||+|.||||+++.|
T Consensus       234 ~S~~s~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         234 LSPLASGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBC
T ss_pred             hCchhCCccCCeEEECcCEeCcC
Confidence            99999999999999999999876

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=5e-54  Score=356.84  Aligned_cols=239  Identities=31%  Similarity=0.503  Sum_probs=208.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++      +.++.++++|++ +.++++++++++.
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dls-~~~~i~~~~~~i~   74 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL------EAEAIAVVADVS-DPKAVEAVFAEAL   74 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC------CSSEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCceEEEEecCC-CHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999998887766654      237888999999 7899999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|.+   .+.++++||.+..   ..|++..
T Consensus        75 ~~~g~iDiLinnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~a~~---~~~~~~~  147 (241)
T d2a4ka1          75 EEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVAGL---GAFGLAH  147 (241)
T ss_dssp             HHHSCCCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCCTTC---CHHHHHH
T ss_pred             HHhCCccEeccccccc-cccchhhhhcccccccccccccccccccccccccccc---ccceeeccccccc---cccCccc
Confidence            9999999999999986 5678889999999999999999999999999998865   4567766665543   3467889


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCC
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSS  255 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~  255 (280)
                      |+++|+|+++|+|++|+|++++|||||+|+||+++|++..... ++...++.. ..|++|+++|+ |+|+++.||+|+++
T Consensus       148 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~-~~~~~~~~~-~~p~~r~~~p~-dva~~v~fL~S~~s  224 (241)
T d2a4ka1         148 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP-PWAWEQEVG-ASPLGRAGRPE-EVAQAALFLLSEES  224 (241)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-HHHHHHHHH-TSTTCSCBCHH-HHHHHHHHHHSGGG
T ss_pred             cchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh-HhHHHHHHh-CCCCCCCcCHH-HHHHHHHHHhcchh
Confidence            9999999999999999999999999999999999999987654 333444443 48999999999 99999999999999


Q ss_pred             CcccccEEEeCCcccC
Q 023555          256 EYVSGNIFIVDSGATL  271 (280)
Q Consensus       256 ~~i~G~~i~vdgG~~~  271 (280)
                      +|+|||+|.+|||+++
T Consensus       225 ~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         225 AYITGQALYVDGGRSI  240 (241)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             CCCcCceEEeCCCccc
Confidence            9999999999999987

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.1e-53  Score=351.88  Aligned_cols=230  Identities=23%  Similarity=0.367  Sum_probs=202.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.            ...++.+|++++       ++.+.+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~------------~~~~~~~Dv~~~-------~~~~~~   62 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------------GHRYVVCDLRKD-------LDLLFE   62 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------------CSEEEECCTTTC-------HHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc------------CCcEEEcchHHH-------HHHHHH
Confidence            7899999999999999999999999999999999998765432            234567999842       455667


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      ++|++|+||||||.. ...++.+++.++|++.+++|+.+++.++|+++|+|++++ .|+||+++|..+..  +.+....|
T Consensus        63 ~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~--~~~~~~~Y  138 (234)
T d1o5ia_          63 KVKEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS--PIENLYTS  138 (234)
T ss_dssp             HSCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHHH
T ss_pred             HhCCCcEEEeccccc-CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccc--cccccccc
Confidence            889999999999975 556788999999999999999999999999999998755 79999999988776  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSE  256 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~  256 (280)
                      ++||+|+++|+|++|.|++++|||||+|+||+++|++.....++... +...+..|++|+++|+ |+|+++.||+|+.++
T Consensus       139 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~-~~~~~~~pl~R~~~pe-diA~~v~fL~S~~s~  216 (234)
T d1o5ia_         139 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK-KQVESQIPMRRMAKPE-EIASVVAFLCSEKAS  216 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH-HHHHTTSTTSSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhChhhc
Confidence            99999999999999999999999999999999999998765554443 3344558999999999 999999999999999


Q ss_pred             cccccEEEeCCcccC
Q 023555          257 YVSGNIFIVDSGATL  271 (280)
Q Consensus       257 ~i~G~~i~vdgG~~~  271 (280)
                      |+|||+|.||||++.
T Consensus       217 ~itG~~i~vDGG~s~  231 (234)
T d1o5ia_         217 YLTGQTIVVDGGLSK  231 (234)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCcCcEEEECccccc
Confidence            999999999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.5e-52  Score=352.19  Aligned_cols=251  Identities=25%  Similarity=0.485  Sum_probs=218.0

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      .+...+|+||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+..   .++.++.+|++ +.+++++
T Consensus        10 ~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g---~~~~~~~~D~~-~~~~v~~   85 (272)
T d1g0oa_          10 GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVG-VVEDIVR   85 (272)
T ss_dssp             SGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT-CHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC---CceeeEeCCCC-CHHHHHH
Confidence            345558999999999999999999999999999999999887 556777887777643   37889999999 7899999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +++++.+.+|++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++|+++|+|.+   .|++++++|..+.. .+
T Consensus        86 ~~~~~~~~~g~idilV~nag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~-~~  160 (272)
T d1g0oa_          86 MFEEAVKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQA-KA  160 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTC-SS
T ss_pred             HHHHHHHHhCCCCccccccccc-hhhhhhhhhhhHHHHHhhhccceeeeecccccccccc---cccccccccccccc-cc
Confidence            9999999999999999999986 5568889999999999999999999999999999965   47899998876543 25


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-----------hhhhhhhhhcCCCCCCCCC
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-----------KDWLNNVASRTYPLRDFGT  238 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~~p~~~~~~  238 (280)
                      .+.+..|+++|+|+++|+|++|.||+++|||||+|+||+++|++.+....           +...........|++|+++
T Consensus       161 ~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~  240 (272)
T d1g0oa_         161 VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGL  240 (272)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBC
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcC
Confidence            57778899999999999999999999999999999999999998654321           1111223345689999999


Q ss_pred             ChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          239 TDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       239 ~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+ |+|+++.||+|+.++|+||++|.||||+++
T Consensus       241 pe-evA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         241 PI-DIARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HH-HHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            99 999999999999999999999999999865

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.4e-52  Score=349.82  Aligned_cols=245  Identities=24%  Similarity=0.444  Sum_probs=215.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec-ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++|+||+||||||++|||+++|+.|+++|++|+++++ +.+.++++.+++++..   .++..+.+|++ +.+++++++++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g---~~~~~~~~D~~-~~~~v~~~~~~   77 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADIS-KPSEVVALFDK   77 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT-SHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC---CCceEecCCCC-CHHHHHHHHHH
Confidence            4799999999999999999999999999999998765 5566788888887643   37889999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      +.+++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|++   .|++++++|..+.. .+.+++
T Consensus        78 ~~~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~~iii~s~~~~~-~~~~~~  152 (259)
T d1ja9a_          78 AVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVM-TGIPNH  152 (259)
T ss_dssp             HHHHHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTC-CSCCSC
T ss_pred             HHHHcCCCcEEEeccccc-cccccccchHHHHHHHHhhccceeeeehhhhhhhhhc---CCcccccccccccc-cCCCCc
Confidence            999999999999999986 5677888999999999999999999999999999965   46788887766543 256889


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-----------chhhhhhhhhcCCCCCCCCCChHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-----------KKDWLNNVASRTYPLRDFGTTDPA  242 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~p~~~~~~~~~~  242 (280)
                      ..|++||+|+++|+|++|+|++++|||||+|+||+++|++.+...           ..+...+......|++|+++|+ |
T Consensus       153 ~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~-e  231 (259)
T d1ja9a_         153 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-D  231 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH-H
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHH-H
Confidence            999999999999999999999999999999999999999864321           1234445555668999999999 9


Q ss_pred             HHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          243 LTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       243 va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      +|+++.||+|+.++|+||++|.+|||+
T Consensus       232 Va~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         232 IGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            999999999999999999999999997

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=6.6e-52  Score=354.52  Aligned_cols=260  Identities=26%  Similarity=0.395  Sum_probs=225.3

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      +.|.++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++..+.+|++ +.++++++
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g--~~~~~~~~D~~-~~~~v~~~   93 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVR-DPDMVQNT   93 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC--CceEEEEeccc-ChHHHHHH
Confidence            4456799999999999999999999999999999999999999999999998877654  36778999999 78999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      ++.+.+.++++|++|||||.. ...++...+.+++++.+.+|+.+.+.+.+.+.+.+......+.+++++|..+..  +.
T Consensus        94 ~~~~~~~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~--~~  170 (294)
T d1w6ua_          94 VSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GS  170 (294)
T ss_dssp             HHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CC
T ss_pred             hhhhhhhccccchhhhhhhhc-cccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--cc
Confidence            999999999999999999986 456778889999999999999999999999888887767678889988887766  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-hhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-KDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ++...|++||+|+++|+|++|.|++++|||||+|+||+++|++...... .+...+......|++|+++|+ |+|+++.|
T Consensus       171 ~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-diA~~v~f  249 (294)
T d1w6ua_         171 GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAF  249 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHH-HHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHH-HHHHHHHH
Confidence            7888999999999999999999999999999999999999999765432 222334444558999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      |+|+.++|+|||+|.||||+++...+.+
T Consensus       250 L~sd~s~~itG~~i~vDGG~~l~~~~~~  277 (294)
T d1w6ua_         250 LCSDYASWINGAVIKFDGGEEVLISGEF  277 (294)
T ss_dssp             HTSGGGTTCCSCEEEESTTHHHHHHSTT
T ss_pred             HhCchhcCCCCcEEEECCChhheeCCCC
Confidence            9999999999999999999987665554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-52  Score=346.30  Aligned_cols=249  Identities=23%  Similarity=0.349  Sum_probs=216.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |.+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++... ..++.++.||++ +++++++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dls-~~~~v~~~v~~   82 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCDLS-NEEDILSMFSA   82 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-SSEEEEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEEEccCC-CHHHHHHHHHH
Confidence            5679999999999999999999999999999999999999999999999987653 347889999999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEeccccccCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      +.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++++.++++|.|++.+ .+|+||++||.++....+.+.
T Consensus        83 ~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~  161 (257)
T d1xg5a_          83 IRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV  161 (257)
T ss_dssp             HHHHHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG
T ss_pred             HHHhcCCCCEEEeccccc-CCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcc
Confidence            999999999999999986 557889999999999999999999999999999997754 368999999998865445566


Q ss_pred             CCCChhhHHHHHHHHHHHHHHh--CCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          173 GVAYASSKAGLNAMTKCLSLEL--GVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~--~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      ...|+++|+|+.+|+|+++.|+  +++||+||+|+||+++|++....... ... ......|++|+++|+ |+|+++.||
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~-~~~-~~~~~~~~~r~~~pe-dvA~~v~fL  238 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-DPE-KAAATYEQMKCLKPE-DVAEAVIYV  238 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-CHH-HHHHHHC---CBCHH-HHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh-hHH-HHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            6789999999999999999998  78999999999999999987654322 122 233347999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCc
Q 023555          251 VHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG  268 (280)
                      +|+.++++|||++.-++|
T Consensus       239 ~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         239 LSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHSCTTEEEEEEEEEETT
T ss_pred             hCChhcCeECCEEEEeCC
Confidence            999999999997555554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-52  Score=346.83  Aligned_cols=241  Identities=27%  Similarity=0.444  Sum_probs=206.2

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |.+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.++        ..+....+|+. .    ++.++.
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~--------~~~~~~~~d~~-~----~~~~~~   67 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY--------PGIQTRVLDVT-K----KKQIDQ   67 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS--------TTEEEEECCTT-C----HHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--------cCCceeeeecc-c----cccccc
Confidence            4579999999999999999999999999999999999998877664332        24566777876 4    345566


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      ..+.++++|+||||+|.. ...++.+.+.++|++.+++|+.+++.++|+++|+|.+++ .|+||+++|..+.. .+.+.+
T Consensus        68 ~~~~~~~id~lVn~ag~~-~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~-~~~~~~  144 (245)
T d2ag5a1          68 FANEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV-KGVVNR  144 (245)
T ss_dssp             HHHHCSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT-BCCTTB
T ss_pred             cccccccceeEEeccccc-CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhhcc-CCccch
Confidence            667789999999999987 456788999999999999999999999999999998755 79999999977642 256788


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc----chhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM----KKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      ..|+++|+|+++|+|++|.|++++|||||+|+||+++|++.....    ......+......|++|+++|+ |+++++.|
T Consensus       145 ~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dva~~v~f  223 (245)
T d2ag5a1         145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVY  223 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHH-HHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            899999999999999999999999999999999999999875432    1222334444568999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      |+|++++|+|||+|.||||++|
T Consensus       224 L~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         224 LASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             HHSGGGTTCCSCEEEECTTGGG
T ss_pred             HhChhhCCCcCceEEeCCCcCC
Confidence            9999999999999999999986

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-52  Score=348.78  Aligned_cols=240  Identities=25%  Similarity=0.413  Sum_probs=210.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+ +.++.++.+|++ +.++++++++++.+
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~-~~~~v~~~~~~~~~   78 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVA-DQQQLRDTFRKVVD   78 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTT-SHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CCcEEEEEeecC-CHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999998876543 447889999999 78999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      ++|++|+||||||...         .++|++.+++|+.+++.++++++|+|.+++  .+|+||++||..+..  +.++..
T Consensus        79 ~~G~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--~~~~~~  147 (254)
T d2gdza1          79 HFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQP  147 (254)
T ss_dssp             HHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTCH
T ss_pred             HcCCcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc--CCCCcc
Confidence            9999999999999852         245889999999999999999999997653  258999999999877  678899


Q ss_pred             CChhhHHHHHHHHHH--HHHHhCCCCeEEEEeecCcccCccccCccchh------hhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          175 AYASSKAGLNAMTKC--LSLELGVHKIRVNSICPGLFKSEITEGLMKKD------WLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~--la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                      .|++||+|+.+|+|+  ++.|++++|||||+|+||+++|+|.+....+.      ...+......|++|+++|+ |+|++
T Consensus       148 ~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~  226 (254)
T d2gdza1         148 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIANG  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH-HHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHH-HHHHH
Confidence            999999999999997  78899999999999999999999987654322      1122333447899999999 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCcccCC
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.||+|++  ++|||+|.||||+.+.
T Consensus       227 v~fL~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         227 LITLIEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHHHHHCT--TCSSCEEEEETTTEEE
T ss_pred             HHHHHcCC--CCCCCEEEECCCCeee
Confidence            99999965  5999999999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.1e-49  Score=330.34  Aligned_cols=229  Identities=25%  Similarity=0.386  Sum_probs=205.6

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCe-------EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCR-------IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~-------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ++||||||++|||+++|++|+++|++       |++++|+.++++++.+++.+.   +.++.++.+|++ +.++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~---g~~~~~~~~Dvt-~~~~v~~~~~   77 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---GALTDTITADIS-DMADVRRLTT   77 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---TCEEEEEECCTT-SHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCC-CHHHHHHHHH
Confidence            56899999999999999999999998       899999999999999998764   347889999999 7899999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      ++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.|++.++|+++|+|++++ .|+||++||..+..  +.|+
T Consensus        78 ~~~~~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~  153 (240)
T d2bd0a1          78 HIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATK--AFRH  153 (240)
T ss_dssp             HHHHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTT
T ss_pred             HHHHHcCCcceeecccccc-cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcC--CCCC
Confidence            9999999999999999986 557888999999999999999999999999999998755 79999999999887  6789


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhc
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVH  252 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s  252 (280)
                      +..|++||+|+.+|+|+++.|++++|||||+|+||+++|+|......+           ...++.+|+ |+|+.+.||++
T Consensus       154 ~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------~~~~~~~Pe-dvA~~v~~l~s  221 (240)
T d2bd0a1         154 SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPE-DIAAPVVQAYL  221 (240)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------TGGGSBCHH-HHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------hHhcCCCHH-HHHHHHHHHHc
Confidence            999999999999999999999999999999999999999998654321           123456788 99999999999


Q ss_pred             CCCCcccccE-EEeCCc
Q 023555          253 DSSEYVSGNI-FIVDSG  268 (280)
Q Consensus       253 ~~~~~i~G~~-i~vdgG  268 (280)
                      +.+++++|+. +..+||
T Consensus       222 ~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         222 QPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             SCTTEEEEEEEEEETTC
T ss_pred             CCccCccCCEEEEecCC
Confidence            9989988875 446766

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-50  Score=346.16  Aligned_cols=230  Identities=29%  Similarity=0.444  Sum_probs=201.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC---------hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR---------VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAA   86 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   86 (280)
                      +|+||++|||||++|||+++|+.|+++|++|++++++         .+.+++..+++..      +.....+|++ +.++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~~-~~~~   76 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR------RGGKAVANYD-SVEA   76 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH------TTCEEEEECC-CGGG
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh------cccccccccc-hHHH
Confidence            7999999999999999999999999999999998764         4566777777755      3345678888 6788


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           87 IENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        87 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      ++++++++.+++|++|+||||||+. ..+++.+++.++|++.+++|+.+++.++|+++|+|++++ .|+||++||..+..
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~  154 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIY  154 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccC-CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcC
Confidence            9999999999999999999999987 457899999999999999999999999999999998865 79999999999887


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHH
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSL  246 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~  246 (280)
                        +.+++..|++||+|+.+|+|+++.|++++|||||+|+||++.|++.... +++           +.+..+|+ |+|++
T Consensus       155 --~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~-~~~-----------~~~~~~Pe-dvA~~  219 (302)
T d1gz6a_         155 --GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM-PED-----------LVEALKPE-YVAPL  219 (302)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS-CHH-----------HHHHSCGG-GTHHH
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC-cHh-----------hHhcCCHH-HHHHH
Confidence              6789999999999999999999999999999999999999988764432 221           22335688 99999


Q ss_pred             HHHhhcCCCCcccccEEEeCCccc
Q 023555          247 VRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +.||+|+.+ ++|||+|.||||+.
T Consensus       220 v~fL~S~~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         220 VLWLCHESC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             HHHHTSTTC-CCCSCEEEEETTEE
T ss_pred             HHHHcCCCc-CCCCcEEEeCCCce
Confidence            999999765 78999999999975

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-48  Score=327.90  Aligned_cols=251  Identities=18%  Similarity=0.261  Sum_probs=214.8

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+... ++....+   .......|++ +..++...++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~   76 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE-EFAAQLG---SDIVLQCDVA-EDASIDTMFAE   76 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHH-HHHHHTT---CCCEEECCTT-CHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHhhcC---Ccceeecccc-hHHHHHHHHHH
Confidence            48999999999998  8999999999999999999999976555544 3333332   4567788998 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVK----SPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                      +.+.++++|++|||++......    .......+.|...+++|+.+.+.+.+++.+.|.+   ++.||++||..+..  +
T Consensus        77 ~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~--~  151 (258)
T d1qsga_          77 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAER--A  151 (258)
T ss_dssp             HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS--B
T ss_pred             hhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhcc--C
Confidence            9999999999999998753221    1234566789999999999999999999988854   56899999988776  6


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      .|.+..|++||+|+++|+|++|.|++++|||||+|+||+++|++...........+......|++|+++|+ |+|+++.|
T Consensus       152 ~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-eia~~v~f  230 (258)
T d1qsga_         152 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAF  230 (258)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHH-HHHHHHHH
Confidence            68889999999999999999999999999999999999999999877655444444444558999999999 99999999


Q ss_pred             hhcCCCCcccccEEEeCCcccCCCCCCC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATLPGLPIF  277 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~~~~~~~  277 (280)
                      |+|++++|+|||+|.||||+++.||+.|
T Consensus       231 L~s~~s~~itG~~i~vDGG~~i~g~~~~  258 (258)
T d1qsga_         231 LCSDLSAGISGEVVHVDGGFSIAAMNEL  258 (258)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGBCSCCC
T ss_pred             HhCchhcCccCceEEECcCHHHhcCCCC
Confidence            9999999999999999999999999875

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.4e-48  Score=335.34  Aligned_cols=252  Identities=21%  Similarity=0.320  Sum_probs=204.4

Q ss_pred             CCcEEEEec--CCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCc---------ceEEE----------
Q 023555           18 DNKVVMVTG--ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSV---------RAMAV----------   76 (280)
Q Consensus        18 ~~k~vlItG--~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~----------   76 (280)
                      ++|++||||  +++|||+++|++|+++|++|++++++............+......         .....          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  558999999999999999999999987765554444333221110         01122          


Q ss_pred             ----------EeccCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 023555           77 ----------ELDVSANGAAIENSVQKAWEAFGRIDALVNNAGVSGAV-KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCI  145 (280)
Q Consensus        77 ----------~~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  145 (280)
                                .+|++ +.++++++++.+.+.||++|++|||+|..... +++.+.+.++|++.+++|+++++.++|+++|
T Consensus        81 ~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          81 DIDEETKNNKRYNML-QNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTC-CCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhh-hHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                      23555 55778999999999999999999999976443 4678899999999999999999999999999


Q ss_pred             HHHhcCCCCeEEEEeccccccCCCCCC-CCCChhhHHHHHHHHHHHHHHhCC-CCeEEEEeecCcccCccccCc------
Q 023555          146 RMRDANQEGSVINISSIAATSRGQLPG-GVAYASSKAGLNAMTKCLSLELGV-HKIRVNSICPGLFKSEITEGL------  217 (280)
Q Consensus       146 ~~~~~~~~g~vv~vsS~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~~~~~-~gi~vn~v~pG~v~t~~~~~~------  217 (280)
                      +|++   .|+||++||..+..  +.|+ ...|++||+|+++|+|++|.|+++ +|||||+|+||+|+|+..+.+      
T Consensus       160 ~m~~---~GsIv~iss~~~~~--~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~  234 (329)
T d1uh5a_         160 IMKP---QSSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT  234 (329)
T ss_dssp             GEEE---EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----
T ss_pred             hccc---ccccccceeehhcc--cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhh
Confidence            9954   58999999988766  5565 457899999999999999999986 599999999999999532221      


Q ss_pred             -------------------------------------cchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccc
Q 023555          218 -------------------------------------MKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSG  260 (280)
Q Consensus       218 -------------------------------------~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G  260 (280)
                                                           ...+...+......|++|+++|+ |+|+++.||+|+.++|+||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pe-dvA~~v~fLaSd~s~~iTG  313 (329)
T d1uh5a_         235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAITG  313 (329)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHSGGGTTCCS
T ss_pred             hhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHH-HHHHHHHHHhCchhCCccC
Confidence                                                 11223334445558999999999 9999999999999999999


Q ss_pred             cEEEeCCcccCCCCCC
Q 023555          261 NIFIVDSGATLPGLPI  276 (280)
Q Consensus       261 ~~i~vdgG~~~~~~~~  276 (280)
                      |+|.||||+++.++|.
T Consensus       314 q~i~VDGG~~~~g~p~  329 (329)
T d1uh5a_         314 QTIYVDNGLNIMFLPD  329 (329)
T ss_dssp             CEEEESTTGGGCSSCC
T ss_pred             CeEEECCCcccccCCC
Confidence            9999999999999984

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.1e-47  Score=320.73  Aligned_cols=247  Identities=19%  Similarity=0.233  Sum_probs=199.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++.+...+ +.... ...++.+..+|++.+.++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAIN-PKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH-HHHHC-TTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHH-HHhhC-CCCCEEEEEeecCCCHHHHHHHHHHH
Confidence            47999999999999999999999999999999999988776655443 33322 34578899999985667899999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEeccccccCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN--QEGSVINISSIAATSRGQLPG  172 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~g~vv~vsS~~~~~~~~~~~  172 (280)
                      .+++|++|+||||||..         +.++|++++++|+.|++.++++++|+|.+++  ..|+||+++|..+..  +.++
T Consensus        79 ~~~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~--~~~~  147 (254)
T d1sbya1          79 FDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AIHQ  147 (254)
T ss_dssp             HHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTT
T ss_pred             HHHcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc--CCCC
Confidence            99999999999999964         3467899999999999999999999997643  368999999999877  7789


Q ss_pred             CCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCC-CCCChHHHHHHHHHhh
Q 023555          173 GVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRD-FGTTDPALTSLVRYLV  251 (280)
Q Consensus       173 ~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~va~~~~~l~  251 (280)
                      +..|++||+|+.+|+++++.|++++|||||+|+||+|+|++.+.............. .++++ ..+|+ ++|..+.+++
T Consensus       148 ~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e-~va~~~~~~~  225 (254)
T d1sbya1         148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE-LLLSHPTQTSE-QCGQNFVKAI  225 (254)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHH-HHTTSCCEEHH-HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHh-ccccCCCCCHH-HHHHHHHHhh
Confidence            999999999999999999999999999999999999999987655433222222222 23333 44455 8998887776


Q ss_pred             cCCCCcccccEEEeCCcccCC--CCCCCCC
Q 023555          252 HDSSEYVSGNIFIVDSGATLP--GLPIFSS  279 (280)
Q Consensus       252 s~~~~~i~G~~i~vdgG~~~~--~~~~~~~  279 (280)
                      +.   +.||++|.+|||+.-.  -...|++
T Consensus       226 ~~---~~tG~vi~vdgG~l~~~~~~~~w~~  252 (254)
T d1sbya1         226 EA---NKNGAIWKLDLGTLEAIEWTKHWDS  252 (254)
T ss_dssp             HH---CCTTCEEEEETTEEEECCCCCSCCC
T ss_pred             hC---CCCCCEEEECCCEeCccCCcccccC
Confidence            53   3599999999996332  2344543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.7e-47  Score=318.46  Aligned_cols=243  Identities=22%  Similarity=0.230  Sum_probs=208.7

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHH---hCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~---~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|++++++++.+++....+ +.++.++.||++ +.+++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~~~Dvs-~~~~v~~l~   79 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLG-TEAGVQRLL   79 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEEEccCC-CHHHHHHHH
Confidence            468999999999999999999999996   799999999999999999999977654 457899999999 789999999


Q ss_pred             HHHHH----HcCCccEEEECCCCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEecccc
Q 023555           92 QKAWE----AFGRIDALVNNAGVSGA--VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN-QEGSVINISSIAA  164 (280)
Q Consensus        92 ~~~~~----~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~vv~vsS~~~  164 (280)
                      +.+.+    .++.+|++|||||...+  ..++.+.+.++|+++|++|+.+++.++|+++|+|++++ ..|+||++||..+
T Consensus        80 ~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc
Confidence            99876    34678999999997543  34577899999999999999999999999999998643 2579999999998


Q ss_pred             ccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---hhhhhhhhhcCCCCCCCCCChH
Q 023555          165 TSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASRTYPLRDFGTTDP  241 (280)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~  241 (280)
                      ..  +.+++..|++||+|+++|+|++|.|  .+|||||+|+||+|+|+|.+....   .+..........|++++.+|+ 
T Consensus       160 ~~--~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-  234 (259)
T d1oaaa_         160 LQ--PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-  234 (259)
T ss_dssp             TS--CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH-
T ss_pred             cC--CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHH-
Confidence            77  7789999999999999999999999  579999999999999998754321   122223333446889999999 


Q ss_pred             HHHHHHHHhhcCCCCcccccEEEe
Q 023555          242 ALTSLVRYLVHDSSEYVSGNIFIV  265 (280)
Q Consensus       242 ~va~~~~~l~s~~~~~i~G~~i~v  265 (280)
                      |+|+.+.||+++ .+|+||++|.|
T Consensus       235 evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         235 TSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             HHHHHHHHHhhh-ccCCCCCeEEe
Confidence            999999999986 56999999986

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=9.2e-47  Score=319.29  Aligned_cols=252  Identities=19%  Similarity=0.268  Sum_probs=200.5

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+..+   ...+..+|++ +++++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~---~~~~~~~d~~-~~~~~~~~~~~   76 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN---SPYVYELDVS-KEEHFKSLYNS   76 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT---CCCEEECCTT-CHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCC---ceeEeeeccc-chhhHHHHHHH
Confidence            58999999999765  9999999999999999999999854 4444555555433   5667899999 78999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVK---SPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                      +.+.+|++|++|||+|......   ......++.+...+.++..+...+.+...+   ..+.++.|+++++.....  +.
T Consensus        77 ~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~s~~~~~~--~~  151 (274)
T d2pd4a1          77 VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKP---LLNNGASVLTLSYLGSTK--YM  151 (274)
T ss_dssp             HHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG---GEEEEEEEEEEECGGGTS--BC
T ss_pred             HHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccc---ccccCcceeeeccccccc--cc
Confidence            9999999999999999864332   222344445555555555544444444433   222234455555555444  56


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +....|+++|+|+++|+|+++.|++++|||||+|+||+++|++.......+..........|++|+++|+ |+|+++.||
T Consensus       152 ~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dIA~~v~fL  230 (274)
T d2pd4a1         152 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGMYL  230 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHH-HHHHHHHHH
Confidence            7778999999999999999999999999999999999999999887766555555555668999999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCCCCCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPGLPIFS  278 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~~~~~~  278 (280)
                      +|+.+.|+|||+|.||||+++.||+.+|
T Consensus       231 ~S~~s~~itG~~i~vDGG~~~~g~~~~~  258 (274)
T d2pd4a1         231 LSSLSSGVSGEVHFVDAGYHVMGMGAVE  258 (274)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBSSCCCT
T ss_pred             hChhhCCCcCceEEECCChhhccCCccc
Confidence            9999999999999999999999999876

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-46  Score=310.88  Aligned_cols=236  Identities=26%  Similarity=0.406  Sum_probs=200.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++..      ......+|+. +.+.++...+.+.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~-~~~~~~~~~~~~~   74 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN------NCVFAPADVT-SEKDVQTALALAK   74 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT------TEEEEECCTT-CHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC------Cccccccccc-ccccccccccccc
Confidence            69999999999999999999999999999999999999999988888743      6778899998 7889999999999


Q ss_pred             HHcCCccEEEECCCCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEeccccc
Q 023555           96 EAFGRIDALVNNAGVSGAV-----KSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIAAT  165 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~vv~vsS~~~~  165 (280)
                      ..++.+|.+++|++.....     .++.+.+.++|++.+++|+.++++++|+++|+|...     .+.|+||++||..+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~  154 (248)
T d2o23a1          75 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  154 (248)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             cccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc
Confidence            9999999999998764322     345677899999999999999999999999998653     246899999999988


Q ss_pred             cCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChHHHH
Q 023555          166 SRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPALT  244 (280)
Q Consensus       166 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~va  244 (280)
                      .  +.+++..|++||+|+++|+|++|.|++++|||||+|+||+++|++...... +... ......|+ +|+++|+ |+|
T Consensus       155 ~--~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~-~~~~-~~~~~~pl~~R~g~pe-evA  229 (248)
T d2o23a1         155 E--GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-KVCN-FLASQVPFPSRLGDPA-EYA  229 (248)
T ss_dssp             H--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------C-HHHHTCSSSCSCBCHH-HHH
T ss_pred             c--CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH-HHHH-HHHhcCCCCCCCcCHH-HHH
Confidence            7  678999999999999999999999999999999999999999999776432 2223 33344676 9999999 999


Q ss_pred             HHHHHhhcCCCCcccccEEEe
Q 023555          245 SLVRYLVHDSSEYVSGNIFIV  265 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~v  265 (280)
                      +++.||++  ++|+|||+|.|
T Consensus       230 ~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         230 HLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHH--CTTCCSCEEEE
T ss_pred             HHHHHHHh--CCCCCceEeEC
Confidence            99999997  57999999976

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.3e-45  Score=313.63  Aligned_cols=244  Identities=25%  Similarity=0.339  Sum_probs=195.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecC-hhHHHHHHHHHHhhcCCCc---------------ceEEEEeccCCC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKQSGSSV---------------RAMAVELDVSAN   83 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~D~~~~   83 (280)
                      +++|||||++|||+++|++|+++|++|++++++ ++.++++.+++++..+...               ......+|++ +
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~-~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT-L   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC-H
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCC-C
Confidence            579999999999999999999999999988765 6667888888877654321               1223456688 7


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHH--------------HHHHhhhhHHHHHHHHHHHHHHh
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWN--------------HIMKTNLTGSWLVSKYVCIRMRD  149 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~~~  149 (280)
                      .++++++++++.+++|++|+||||||... ..++.+.+.++|+              ..+.+|+.+++.+.|.+.+.+..
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            89999999999999999999999999863 4566666655544              47899999999999999887643


Q ss_pred             -----cCCCCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhh
Q 023555          150 -----ANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN  224 (280)
Q Consensus       150 -----~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~  224 (280)
                           +...++||+++|.....  +.+++..|++||+|+++|+|++|.|++++|||||+|+||++.+...   ..++..+
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~--~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~---~~~~~~~  235 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD---MPPAVWE  235 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG---SCHHHHH
T ss_pred             hHHHhcCCCCcccccccccccC--CccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc---CCHHHHH
Confidence                 33467899999887765  6788899999999999999999999999999999999998655432   2233334


Q ss_pred             hhhhcCCCC-CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          225 NVASRTYPL-RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       225 ~~~~~~~p~-~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      ..... .|+ +|+++|+ |+|+++.||+|++++|+|||+|.||||++++
T Consensus       236 ~~~~~-~pl~~R~~~pe-eiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         236 GHRSK-VPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHTT-CTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHhc-CCCCCCCCCHH-HHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            44444 664 9999999 9999999999999999999999999999875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.3e-46  Score=320.31  Aligned_cols=255  Identities=20%  Similarity=0.235  Sum_probs=203.5

Q ss_pred             CCCCcEEEEecCCC--hhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCC--------Cc---ceEEEEec---
Q 023555           16 QLDNKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGS--------SV---RAMAVELD---   79 (280)
Q Consensus        16 ~l~~k~vlItG~~~--giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~D---   79 (280)
                      +|+||++|||||++  |||+++|++|+++|++|++++|+.................        ..   ++..+..+   
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            79999999999875  9999999999999999999999765443332222111100        00   12222211   


Q ss_pred             ---------------cCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHH
Q 023555           80 ---------------VSANGAAIENSVQKAWEAFGRIDALVNNAGVSGA-VKSPLDLTEEEWNHIMKTNLTGSWLVSKYV  143 (280)
Q Consensus        80 ---------------~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  143 (280)
                                     .+ +..+++++++++.++||++|+||||||.... ..++.+.+.++|++.+++|+.+++.+++++
T Consensus        85 ~~~~~~dv~~~~~~~~~-~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGS-SNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             GGGSCHHHHTSHHHHHC-CCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchhhhhhhhhhhhc-cHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                           12 3346789999999999999999999997532 356788999999999999999999999999


Q ss_pred             HHHHHhcCCCCeEEEEeccccccCCCCCCCCCChhhHHHHHHHHHHHHHHhC-CCCeEEEEeecCcccCccccCccchhh
Q 023555          144 CIRMRDANQEGSVINISSIAATSRGQLPGGVAYASSKAGLNAMTKCLSLELG-VHKIRVNSICPGLFKSEITEGLMKKDW  222 (280)
Q Consensus       144 ~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~gi~vn~v~pG~v~t~~~~~~~~~~~  222 (280)
                      +++|.+   .|+++++++..... ...+....|+++|+++..+++.++.+++ ++|||||+|+||+++|++.+.....+.
T Consensus       164 ~~~~~~---~g~~~~~~~~~~~~-~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~  239 (297)
T d1d7oa_         164 LPIMNP---GGASISLTYIASER-IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT  239 (297)
T ss_dssp             GGGEEE---EEEEEEEECGGGTS-CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHH
T ss_pred             HHHhhc---CCcceeeeehhhcc-cccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHH
Confidence            988865   45667777655443 2346777899999999999999999997 579999999999999999887655444


Q ss_pred             hhhhhhcCCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCCCC
Q 023555          223 LNNVASRTYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       223 ~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      ..+......|++|+++|+ |+|+++.||+|+.++|+|||+|.||||+++.|+..
T Consensus       240 ~~~~~~~~~PlgR~~~pe-evA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~  292 (297)
T d1d7oa_         240 MIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL  292 (297)
T ss_dssp             HHHHHHHHSSSCCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCT
T ss_pred             HHHHHHhCCCCCCCCCHH-HHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCC
Confidence            444445558999999999 99999999999999999999999999999999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-45  Score=304.57  Aligned_cols=218  Identities=21%  Similarity=0.296  Sum_probs=192.2

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..   .++..+.||++ +.++++++++++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~---~~~~~~~~Dvs-~~~~v~~~~~~i   78 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCS-NREDIYSSAKKV   78 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCC-CHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999997643   37889999999 789999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+++|++|++|||||.. ...++.+.+.++|++++++|+.|++.++++++|+|.+++ .|+||++||..+..  +.|+++
T Consensus        79 ~~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~--~~~~~~  154 (244)
T d1yb1a_          79 KAEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHV--SVPFLL  154 (244)
T ss_dssp             HHHTCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CC--CHHHHH
T ss_pred             HHHcCCCceeEeecccc-ccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcC--CCCCcH
Confidence            99999999999999986 446777889999999999999999999999999998754 79999999999887  678889


Q ss_pred             CChhhHHHHHHHHHHHHHHhCC---CCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh
Q 023555          175 AYASSKAGLNAMTKCLSLELGV---HKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV  251 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~---~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~  251 (280)
                      .|++||+|+.+|+++|+.|+++   +||+||+|+||+|+|++.+...            .+..+..+|+ ++++.+....
T Consensus       155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------------~~~~~~~~pe-~va~~i~~~~  221 (244)
T d1yb1a_         155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------------TSLGPTLEPE-EVVNRLMHGI  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------------HHHCCCCCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC------------ccccCCCCHH-HHHHHHHHHH
Confidence            9999999999999999999865   5899999999999999876421            1233455777 9998776654


Q ss_pred             cC
Q 023555          252 HD  253 (280)
Q Consensus       252 s~  253 (280)
                      ..
T Consensus       222 ~~  223 (244)
T d1yb1a_         222 LT  223 (244)
T ss_dssp             HT
T ss_pred             hc
Confidence            33

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-43  Score=293.83  Aligned_cols=232  Identities=29%  Similarity=0.406  Sum_probs=192.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|++|||||++|||+++|++|+++|++|++++|+++.               .+....++|++ .......+........
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------------~~~~~~~~d~~-~~~~~~~~~~~~~~~~   64 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------------EDLIYVEGDVT-REEDVRRAVARAQEEA   64 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------------SSSEEEECCTT-CHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------------ccceEeecccc-chhhhHHHHHhhhccc
Confidence            5999999999999999999999999999999998642               25667899999 6778888887776665


Q ss_pred             CCccEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEeccccccCCCC
Q 023555           99 GRIDALVNNAGVSGA---VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA-----NQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        99 g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~g~vv~vsS~~~~~~~~~  170 (280)
                       ..+.++++++....   .......+.+.|++.+++|+.+.+.+++.+.+.+.+.     ++.|+||++||..+..  +.
T Consensus        65 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~--~~  141 (241)
T d1uaya_          65 -PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--GQ  141 (241)
T ss_dssp             -CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--CC
T ss_pred             -cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc--CC
Confidence             44555566554322   2344567889999999999999999999999986432     3468999999999887  67


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      +++..|++||+|+++|+|++|.|++++|||||+|+||+++|++......+ ...+......+.+|+++|+ |+|+++.||
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-~~~~~~~~~~~~~R~g~pe-dvA~~v~fL  219 (241)
T d1uaya_         142 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK-AKASLAAQVPFPPRLGRPE-EYAALVLHI  219 (241)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH-HHHHHHTTCCSSCSCCCHH-HHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh-HHHHHHhcCCCCCCCcCHH-HHHHHHHHH
Confidence            89999999999999999999999999999999999999999998765433 3333444434459999999 999999999


Q ss_pred             hcCCCCcccccEEEeCCcccCCC
Q 023555          251 VHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +|  ++|+|||+|.||||+++.-
T Consensus       220 ~s--~~~iTG~~i~VDGG~~m~p  240 (241)
T d1uaya_         220 LE--NPMLNGEVVRLDGALRMAP  240 (241)
T ss_dssp             HH--CTTCCSCEEEESTTCCCCC
T ss_pred             Hh--CCCCCCCEEEECCcccCCC
Confidence            98  4699999999999998753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.6e-43  Score=297.00  Aligned_cols=245  Identities=18%  Similarity=0.225  Sum_probs=197.4

Q ss_pred             CCCCcEEEEec--CCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTG--ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG--~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|+||++||||  |++|||+++|++|+++|++|++++|+.+++.+   ++.+..  +.+...+++|++ +.++++.+++.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~--~~~~~~~~~dv~-~~~~~~~~~~~   76 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL--PAKAPLLELDVQ-NEEHLASLAGR   76 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS--SSCCCEEECCTT-CHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc--CCceeeEeeecc-cccccccccch
Confidence            58999999999  45799999999999999999999999876533   232332  235677899999 78999999999


Q ss_pred             HHHHc---CCccEEEECCCCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecccccc
Q 023555           94 AWEAF---GRIDALVNNAGVSGA----VKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATS  166 (280)
Q Consensus        94 ~~~~~---g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~  166 (280)
                      +.+.+   +.+|++|||+|+...    ..++.+.+.+++.+.+.+|+.+.+...+...+++.    .+.+++++|.....
T Consensus        77 v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~s~~~~~  152 (268)
T d2h7ma1          77 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN----PGGSIVGMDFDPSR  152 (268)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE----EEEEEEEEECCCSS
T ss_pred             hhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc----cccccccccccccc
Confidence            87764   679999999997532    23456788999999999999999988888766542    24455555555544


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----------hhhhhhhhhcCCCCCC-
Q 023555          167 RGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----------KDWLNNVASRTYPLRD-  235 (280)
Q Consensus       167 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~p~~~-  235 (280)
                        +.|++..|+++|+|+.+|+|++|.|++++|||||+|+||+++|++...+..          .+...+......|++| 
T Consensus       153 --~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr  230 (268)
T d2h7ma1         153 --AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWN  230 (268)
T ss_dssp             --CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred             --cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCC
Confidence              668889999999999999999999999999999999999999998654321          1122233334478766 


Q ss_pred             CCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCC
Q 023555          236 FGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPG  273 (280)
Q Consensus       236 ~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
                      +++|+ |+|+++.||+|+.++|+|||+|.||||+|.+-
T Consensus       231 ~~~p~-dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~~  267 (268)
T d2h7ma1         231 MKDAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQL  267 (268)
T ss_dssp             TTCCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGCC
T ss_pred             CCCHH-HHHHHHHHHhCchhcCccCCEEEECcCccccc
Confidence            89999 99999999999999999999999999998753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.3e-42  Score=292.31  Aligned_cols=244  Identities=24%  Similarity=0.373  Sum_probs=193.9

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH-HHHHHHHHHhhcCCCcceEEEEeccCC---CHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKQSGSSVRAMAVELDVSA---NGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~   95 (280)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++....+.  +.....+|..+   ..+.++++++.+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--SAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCC--ceEEEecccccchhHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998554 57778888776553  45555554432   3567888888899


Q ss_pred             HHcCCccEEEECCCCCCCCCC----------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc----CCCCeEEEEec
Q 023555           96 EAFGRIDALVNNAGVSGAVKS----------PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA----NQEGSVINISS  161 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~vv~vsS  161 (280)
                      +++|++|++|||||+..+...          ......+.+...+..|+.+.+...+...+.+...    ...+.++++++
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence            999999999999998643211          1123345677788899999988888777766442    23567888888


Q ss_pred             cccccCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCC-CCCh
Q 023555          162 IAATSRGQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDF-GTTD  240 (280)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~  240 (280)
                      ..+..  +.|++..|++||+|+++|+|++|.+++++|||||+|+||+++|++...   +.... ...+..|++|. ++|+
T Consensus       160 ~~~~~--~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~~~~~-~~~~~~pl~r~~~~pe  233 (266)
T d1mxha_         160 AMTDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---QETQE-EYRRKVPLGQSEASAA  233 (266)
T ss_dssp             GGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---HHHHH-HHHTTCTTTSCCBCHH
T ss_pred             ccccc--cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---HHHHH-HHHhcCCCCCCCCCHH
Confidence            77765  678999999999999999999999999999999999999999986542   23333 34445798765 7898


Q ss_pred             HHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          241 PALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       241 ~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                       |+|+++.||+|+.+.|+|||+|.||||+++.
T Consensus       234 -eva~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         234 -QIADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             -HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -HHHHHHHHHhCchhCCccCCeEEECccHhhh
Confidence             9999999999999999999999999999985

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-43  Score=299.77  Aligned_cols=236  Identities=19%  Similarity=0.269  Sum_probs=188.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEE---EecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVA---AARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l---~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .|+||||||++|||+++|+.|+++|++|++   +.|+.+..+++.+..++....+.++..+.+|++ +.++++++++++.
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR-DSKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT-CHHHHHHHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEecccc-chHhhhhhhhhcc
Confidence            588999999999999999999999998554   456555555554444444344568999999999 7899999998874


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      +  |.+|++|||+|.. ...++.+.+.++|++.+++|+.|++.++|+++|+|++++ .|+||++||..+..  +.|+...
T Consensus        81 ~--g~idilvnnag~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~--~~~~~~~  154 (285)
T d1jtva_          81 E--GRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM--GLPFNDV  154 (285)
T ss_dssp             T--SCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS--CCTTCHH
T ss_pred             c--cchhhhhhccccc-ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcC--CCCCchH
Confidence            4  7999999999986 557788999999999999999999999999999998765 79999999999987  7788999


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh----------hhhhh-----hhcCCCCCCCCCCh
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD----------WLNNV-----ASRTYPLRDFGTTD  240 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~----------~~~~~-----~~~~~p~~~~~~~~  240 (280)
                      |++||+|+.+|+++++.|++++||+||+|+||+|+|++.......+          ...+.     .....|.++..+|+
T Consensus       155 Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe  234 (285)
T d1jtva_         155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPE  234 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHH
Confidence            9999999999999999999999999999999999999976543211          01110     11224566788898


Q ss_pred             HHHHHHHHHhhcCC---CCcccccE
Q 023555          241 PALTSLVRYLVHDS---SEYVSGNI  262 (280)
Q Consensus       241 ~~va~~~~~l~s~~---~~~i~G~~  262 (280)
                       |+|+++++++...   ..|++|+.
T Consensus       235 -eVA~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         235 -EVAEVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             -HHHHHHHHHHHCSSCCSEEESCST
T ss_pred             -HHHHHHHHHHhCCCCCeEEecHHH
Confidence             9999999998643   46888864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.8e-41  Score=282.45  Aligned_cols=227  Identities=24%  Similarity=0.302  Sum_probs=185.1

Q ss_pred             cEEEEecCCChhHHHHHHHHH---HhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLA---KAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~---~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |+||||||++|||+++|++|+   ++|++|++++|++++++++.+... ..   .++.++.+|++ +.++++++++++.+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~-~~---~~~~~~~~Dvs-~~~~v~~~~~~i~~   77 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK-NH---SNIHILEIDLR-NFDAYDKLVADIEG   77 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH-HC---TTEEEEECCTT-CGGGHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh-cC---CcEEEEEEEec-cHHHHHHHHhhhHH
Confidence            899999999999999999996   579999999999998877654333 22   37889999999 78999999999854


Q ss_pred             --HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc----------CCCCeEEEEecccc
Q 023555           97 --AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA----------NQEGSVINISSIAA  164 (280)
Q Consensus        97 --~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~~g~vv~vsS~~~  164 (280)
                        .++++|+||||||+.....++.+.+.++|++.+++|+.+++.++++++|+|++.          ...|++|+++|..+
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence              678999999999987666677789999999999999999999999999999863          13689999999876


Q ss_pred             ccC-CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHH
Q 023555          165 TSR-GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPAL  243 (280)
Q Consensus       165 ~~~-~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v  243 (280)
                      ... .+.+++..|++||+|+.+|++++|.|++++||+||+|+||+++|+|.....             |+    .+++.+
T Consensus       158 ~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~-------------~~----~~~~~~  220 (248)
T d1snya_         158 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA-------------PL----DVPTST  220 (248)
T ss_dssp             CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC-------------SB----CHHHHH
T ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC-------------CC----CchHHH
Confidence            532 244567799999999999999999999999999999999999999975421             21    122133


Q ss_pred             HHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          244 TSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       244 a~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      ++++ .++.......||++|..||+.
T Consensus       221 ~~i~-~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         221 GQIV-QTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHH-HHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHH-HHHHhcCccCCCcEEEECCeE
Confidence            3333 333333445699999999875

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-42  Score=286.56  Aligned_cols=218  Identities=13%  Similarity=0.171  Sum_probs=182.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +||++|||||++|||+++|+.|+++|++|+++++++...             ........+|.+ +.+..+.+...+.+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~   66 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDS-FTEQADQVTAEVGKL   66 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccccceeecccC-cHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999875431             124455667776 567777777777665


Q ss_pred             cC--CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           98 FG--RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        98 ~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                      ++  ++|+||||||.........+.+.++|++.+++|+.+++.++++++|+|++   +|+||++||..+..  +.+++..
T Consensus        67 ~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~--~~~~~~~  141 (236)
T d1dhra_          67 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALD--GTPGMIG  141 (236)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTBHH
T ss_pred             hCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcC--CccCCcc
Confidence            44  69999999997655556677788999999999999999999999999964   58999999999877  6788999


Q ss_pred             ChhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcC
Q 023555          176 YASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~  253 (280)
                      |++||+|+++|+|++|.|++  ++|||||+|+||+++|++.+...++          .+..+...|+ ++++.+.||+++
T Consensus       142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~pe-~va~~~~~l~s~  210 (236)
T d1dhra_         142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLE-FLVETFHDWITG  210 (236)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHH-HHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------chhhcCCCHH-HHHHHHHHHhCC
Confidence            99999999999999999998  5799999999999999986543221          1233445566 999999999999


Q ss_pred             CCCcccccEEEe
Q 023555          254 SSEYVSGNIFIV  265 (280)
Q Consensus       254 ~~~~i~G~~i~v  265 (280)
                      ...++||+.+.|
T Consensus       211 ~~~~i~G~~i~v  222 (236)
T d1dhra_         211 NKRPNSGSLIQV  222 (236)
T ss_dssp             TTCCCTTCEEEE
T ss_pred             CccCCCCCeEEE
Confidence            999999987766

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-42  Score=289.19  Aligned_cols=222  Identities=23%  Similarity=0.317  Sum_probs=187.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh-CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.+++.+..+   ++.++.||++ +.++++++++++.+++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dvs-~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL---SPRFHQLDID-DLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC---CCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEEecC-CHHHHHHHHHHHHHhc
Confidence            45699999999999999999987 89999999999999999999987543   6788999999 7899999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC-----------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR-----------  167 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~-----------  167 (280)
                      |++|+||||||+. ...+..+.+.++|++.|++|+.|++.++++++|+|++   .|+||+++|..+...           
T Consensus        80 g~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k  155 (275)
T d1wmaa1          80 GGLDVLVNNAGIA-FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQK  155 (275)
T ss_dssp             SSEEEEEECCCCC-CCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCcEEEEEcCCcC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhh
Confidence            9999999999986 3456667788999999999999999999999999964   489999999765321           


Q ss_pred             ----------------------------CCCCCCCCChhhHHHHHHHHHHHHHHhCC----CCeEEEEeecCcccCcccc
Q 023555          168 ----------------------------GQLPGGVAYASSKAGLNAMTKCLSLELGV----HKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       168 ----------------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~----~gi~vn~v~pG~v~t~~~~  215 (280)
                                                  ........|++||+++..|++.+++++++    .||+||+|+||+++|+|..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~  235 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  235 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence                                        01123357999999999999999999864    5999999999999999875


Q ss_pred             CccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhh--cCCCCcccccEEEeCCc
Q 023555          216 GLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLV--HDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       216 ~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~--s~~~~~i~G~~i~vdgG  268 (280)
                      ...                 ..+|+ |+|+.++|++  +++..+++|+.+. |++
T Consensus       236 ~~~-----------------~~~pe-e~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         236 PKA-----------------TKSPE-EGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             TTC-----------------SBCHH-HHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             Ccc-----------------cCCHH-HHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence            321                 12466 8999999986  5667789998876 654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-40  Score=278.27  Aligned_cols=199  Identities=24%  Similarity=0.309  Sum_probs=179.7

Q ss_pred             CCCCcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHH
Q 023555            8 CLDLEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAI   87 (280)
Q Consensus         8 ~~~~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   87 (280)
                      ..+++|.+ |+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+..+  .......+|++ +.+.+
T Consensus         4 ~~~f~~~~-L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~--~~~~~~~~d~~-~~~~~   79 (269)
T d1xu9a_           4 NEEFRPEM-LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--ASAHYIAGTME-DMTFA   79 (269)
T ss_dssp             SSCCCGGG-GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC--SEEEEEECCTT-CHHHH
T ss_pred             CccCCccc-cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc--ccchhhhhhhh-hHHHH
Confidence            45565654 9999999999999999999999999999999999999999999988876644  46778899998 78999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC
Q 023555           88 ENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR  167 (280)
Q Consensus        88 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~  167 (280)
                      ....+.+.+.+|.+|++|||+|.. ...++.+.+.++|++++++|+.+++.++++++|+|++.  +|+||++||..+.. 
T Consensus        80 ~~~~~~~~~~~g~~~~li~nag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~-  155 (269)
T d1xu9a_          80 EQFVAQAGKLMGGLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKV-  155 (269)
T ss_dssp             HHHHHHHHHHHTSCSEEEECCCCC-CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTS-
T ss_pred             HHHHHHHHHHhCCccccccccccc-cccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcC-
Confidence            999999999999999999999986 45677888999999999999999999999999999764  58999999999877 


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHhCC--CCeEEEEeecCcccCcccc
Q 023555          168 GQLPGGVAYASSKAGLNAMTKCLSLELGV--HKIRVNSICPGLFKSEITE  215 (280)
Q Consensus       168 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~--~gi~vn~v~pG~v~t~~~~  215 (280)
                       +.|++..|++||+|+++|+++|+.|+++  .||+||+|+||+|+|++..
T Consensus       156 -~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~  204 (269)
T d1xu9a_         156 -AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM  204 (269)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHH
Confidence             7789999999999999999999999974  5799999999999999865

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.6e-40  Score=274.26  Aligned_cols=226  Identities=23%  Similarity=0.298  Sum_probs=178.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+    ..  ..++.++.+|++ +.++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~--~~~~~~~~~Dvs-~~~~v~~~~~~i   73 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IK--DSRVHVLPLTVT-CDKSLDTFVSKV   73 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CC--CTTEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hh--CCceEEEEEecC-CHHHHHHHHHHH
Confidence            5679999999999999999999999996  68899999988776543    22  237888999999 789999999999


Q ss_pred             HHHcCC--ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----------CCCeEEEEecc
Q 023555           95 WEAFGR--IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDAN----------QEGSVINISSI  162 (280)
Q Consensus        95 ~~~~g~--id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----------~~g~vv~vsS~  162 (280)
                      .+.++.  +|+||||||+..+..++.+.+.++|++.+++|+.|++.++++++|+|++..          ..++++++++.
T Consensus        74 ~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~  153 (250)
T d1yo6a1          74 GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSG  153 (250)
T ss_dssp             HHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCG
T ss_pred             HHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccc
Confidence            988764  999999999876667788899999999999999999999999999997642          24789999886


Q ss_pred             ccccCC-----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCC
Q 023555          163 AATSRG-----QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFG  237 (280)
Q Consensus       163 ~~~~~~-----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (280)
                      ......     +..+..+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|.....                 ..
T Consensus       154 ~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~-----------------~~  216 (250)
T d1yo6a1         154 LGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-----------------AL  216 (250)
T ss_dssp             GGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------
T ss_pred             cccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC-----------------CC
Confidence            544321     12234569999999999999999999999999999999999999865311                 12


Q ss_pred             CChHHHHHHHHHhhcCCCCcccccEEEeCC
Q 023555          238 TTDPALTSLVRYLVHDSSEYVSGNIFIVDS  267 (280)
Q Consensus       238 ~~~~~va~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
                      +|+ +.+..+..++.......+|..+..||
T Consensus       217 ~~e-~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         217 TVE-QSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             --H-HHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             CHH-HHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            466 66666666666656678999888775

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.9e-40  Score=277.59  Aligned_cols=226  Identities=21%  Similarity=0.347  Sum_probs=166.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH-Hc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE-AF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   98 (280)
                      |+||||||++|||+++|++|+++|++|++++|++++                    ..+|++ +.+..+.....+.. ..
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~-~~~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLS-TAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTT-SHHHHHHHHHHHHTTCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhc-CHHHHHHHHHHHHHHhC
Confidence            799999999999999999999999999999997531                    356777 56666666555544 45


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccC-----------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSR-----------  167 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~-----------  167 (280)
                      +.+|++|||||+...        .+.+.....+|..+...+.+...+.+.+.. ...+.++.+......           
T Consensus        61 ~~id~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (257)
T d1fjha_          61 KGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             TCCSEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             CCCcEEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhc
Confidence            679999999987521        234677788999999999999999987754 455555554332210           


Q ss_pred             ---------------CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-hhhhhhhcCC
Q 023555          168 ---------------GQLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTY  231 (280)
Q Consensus       168 ---------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~  231 (280)
                                     ...++...|++||+|+++|+|++|.||+++|||||+|+||+++|++.+....++ ....+.....
T Consensus       132 ~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  211 (257)
T d1fjha_         132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVP  211 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCC
T ss_pred             cCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCC
Confidence                           011234579999999999999999999999999999999999999987654433 3334444557


Q ss_pred             CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCCCCCC
Q 023555          232 PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLPGLPI  276 (280)
Q Consensus       232 p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
                      |++|+++|+ |+|+++.||+|+.++|+|||+|.||||++..-+|-
T Consensus       212 PlgR~g~p~-eva~~v~fL~S~~s~~itG~~i~vDGG~tav~~p~  255 (257)
T d1fjha_         212 PMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRPT  255 (257)
T ss_dssp             STTSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHCTT
T ss_pred             CCCCCcCHH-HHHHHHHHHhCchhCCccCceEEeCCCccchhcCC
Confidence            999999999 99999999999999999999999999998766663

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.7e-40  Score=271.73  Aligned_cols=222  Identities=14%  Similarity=0.161  Sum_probs=178.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH--
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE--   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--   96 (280)
                      .++||||||++|||+++|++|+++|++|++++|+++...             .......+|.. ..+......+.+..  
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~   67 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKN-WTEQEQSILEQTASSL   67 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSC-HHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------------cccceeccccC-chhHHHHHHHHHHHHh
Confidence            456799999999999999999999999999999864311             13445566766 45556665666555  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      .++++|+||||||......+..+.+.++|+.++++|+.+++.++|+++|+|++   +|+||++||..+..  +.+++..|
T Consensus        68 ~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~--~~~~~~~Y  142 (235)
T d1ooea_          68 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMG--PTPSMIGY  142 (235)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTBHHH
T ss_pred             cCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcC--Ccccccch
Confidence            46899999999998644455556667889999999999999999999999964   58999999998877  77899999


Q ss_pred             hhhHHHHHHHHHHHHHHhC--CCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHH-HhhcC
Q 023555          177 ASSKAGLNAMTKCLSLELG--VHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVR-YLVHD  253 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~--~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~-~l~s~  253 (280)
                      ++||+|+++|+++++.|++  +.+|+||+|+||+++|++.+...++          .+..+..+|+ ++++.+. |+.++
T Consensus       143 ~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------~~~~~~~~~~-~va~~~~~~l~~~  211 (235)
T d1ooea_         143 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLS-FISEHLLKWTTET  211 (235)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHH-HHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------CccccCCCHH-HHHHHHHHHhcCc
Confidence            9999999999999999998  4799999999999999986543221          2233445676 8998775 56677


Q ss_pred             CCCcccccEEEe---CCccc
Q 023555          254 SSEYVSGNIFIV---DSGAT  270 (280)
Q Consensus       254 ~~~~i~G~~i~v---dgG~~  270 (280)
                      ...++||+.+.|   ||+..
T Consensus       212 ~~~~~tG~~i~v~~~~g~~~  231 (235)
T d1ooea_         212 SSRPSSGALLKITTENGTST  231 (235)
T ss_dssp             GGCCCTTCEEEEEEETTEEE
T ss_pred             cccCCCceEEEEEeeCCEEE
Confidence            788999999998   66544

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=9e-31  Score=218.79  Aligned_cols=224  Identities=17%  Similarity=0.159  Sum_probs=167.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh---hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++++|||||++|||+++|+.|+++|+ +|++++|+.   +..++..+++...   +.++.++.||++ +.++++++++++
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dv~-d~~~~~~~~~~i   84 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVT-DRESVRELLGGI   84 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTT-CHHHHHHHHHTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc---cccccccccccc-hHHHHHHhhccc
Confidence            57999999999999999999999999 589999975   3456666666543   458999999999 789999999987


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCC
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGV  174 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~  174 (280)
                      .+. +++|.+|||+|.. ...++.+.+.++|+..+++|+.+++.+.+.+    .. ...+++|++||..+..  +.+++.
T Consensus        85 ~~~-~~i~~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~-~~~~~iv~~SS~a~~~--g~~~~~  155 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELT----RE-LDLTAFVLFSSFASAF--GAPGLG  155 (259)
T ss_dssp             CTT-SCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TT-SCCSEEEEEEEHHHHT--CCTTCT
T ss_pred             ccc-ccccccccccccc-cccccccccHHHHHHHhhhhccchhHHHHHh----hc-cCCceEeeecchhhcc--CCcccH
Confidence            654 6899999999987 4567889999999999999999999887754    33 3468999999999987  678999


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|+++|++++.|++.++.    .|+++++|+||.+.++........+.    ...  .--...+|+ ++++.+..++...
T Consensus       156 ~YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~~~~~----~~~--~G~~~~~~~-~~~~~l~~~l~~~  224 (259)
T d2fr1a1         156 GYAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGPVADR----FRR--HGVIEMPPE-TACRALQNALDRA  224 (259)
T ss_dssp             TTHHHHHHHHHHHHHHHH----TTCCCEEEEECCBC----------------CTT--TTEECBCHH-HHHHHHHHHHHTT
T ss_pred             HHHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccchHHHH----HHh--cCCCCCCHH-HHHHHHHHHHhCC
Confidence            999999999998877765    49999999999887553321111111    111  001123566 8888877776543


Q ss_pred             CCcccccEEEeCCc
Q 023555          255 SEYVSGNIFIVDSG  268 (280)
Q Consensus       255 ~~~i~G~~i~vdgG  268 (280)
                        .....++.+|..
T Consensus       225 --~~~~~v~~~d~~  236 (259)
T d2fr1a1         225 --EVCPIVIDVRWD  236 (259)
T ss_dssp             --CSSCEECEECHH
T ss_pred             --CceEEEEeCcHH
Confidence              233445566643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=3.1e-19  Score=154.81  Aligned_cols=229  Identities=14%  Similarity=0.110  Sum_probs=152.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-----HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-----RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|+||||||+|.||++++++|.++|++|+.++|...     +++.+..+.   .....++.++.+|++ +.++++++++.
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~-d~~~~~~~~~~   76 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP---HTCNPKFHLHYGDLS-DTSNLTRILRE   76 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSS-CHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhh---hhcCCCeEEEEeecC-CHHHHHHHHhc
Confidence            389999999999999999999999999999999543     222222211   112347889999999 78888888876


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----  168 (280)
                      .     .+|+++|.|+......     +.++.+..+++|+.|+.++++++...-.  ++..++|++||...+...     
T Consensus        77 ~-----~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~--~~~~r~i~~SS~~vYG~~~~~~~  144 (357)
T d1db3a_          77 V-----QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGL--EKKTRFYQASTSELYGLVQEIPQ  144 (357)
T ss_dssp             H-----CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTC--TTTCEEEEEEEGGGGTTCCSSSB
T ss_pred             c-----CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEEchhhhCCCCCCCc
Confidence            5     7899999999864322     2244566789999999999988733211  224589999986543210     


Q ss_pred             ----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh----hhhhhhh-cC--------C
Q 023555          169 ----QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD----WLNNVAS-RT--------Y  231 (280)
Q Consensus       169 ----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~----~~~~~~~-~~--------~  231 (280)
                          +..+...|+.||.+.+.+++.+++.+   ++.+..+.|+.+..|.........    .+..... ..        .
T Consensus       145 ~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~  221 (357)
T d1db3a_         145 KETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMD  221 (357)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTT
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCC
Confidence                11234679999999999999999886   688999999888776432221111    1111111 11        1


Q ss_pred             CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          232 PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       232 p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ..+.+...+ |+++++..++...    .|+.+++..|..+
T Consensus       222 ~~r~~~~v~-D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         222 SLRDWGHAK-DYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             CEECCEEHH-HHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             eeecceeec-hHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            122356677 9999887776432    4677888776654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=1.5e-21  Score=154.80  Aligned_cols=156  Identities=14%  Similarity=0.179  Sum_probs=112.8

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+..    ++....+|++ +.++++++   
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~d~~-~~~~~~~~---   89 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETA-DDASRAEA---   89 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECC-SHHHHHHH---
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc----chhhhhhhcc-cHHHHHHH---
Confidence            348999999999999999999999999999999999999999999998887643    3455788998 56665554   


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                          ++++|+||||||..     +..++.++|++.+++|+.+.++....+.+.+....  .....+++........ .+.
T Consensus        90 ----~~~iDilin~Ag~g-----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~-~g~  157 (191)
T d1luaa1          90 ----VKGAHFVFTAGAIG-----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFGALG-IGG  157 (191)
T ss_dssp             ----TTTCSEEEECCCTT-----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEECHHH-HHH
T ss_pred             ----hcCcCeeeecCccc-----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEeccC-cCc
Confidence                35899999999863     23568999999999998887766544433222211  2222222222211001 133


Q ss_pred             CCChhhHHHHHHHHHH
Q 023555          174 VAYASSKAGLNAMTKC  189 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~  189 (280)
                      ..|+++|+++..|+++
T Consensus       158 ~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         158 LKLKLHRACIAKLFES  173 (191)
T ss_dssp             HHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            4699999999877653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.73  E-value=1.4e-16  Score=137.00  Aligned_cols=174  Identities=16%  Similarity=0.147  Sum_probs=125.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +||+||||||+|.||.++++.|.++|++|+.+.|+.++...+......... ......+..|++ +.+++..++      
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~------   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GRFETAVVEDML-KQGAYDEVI------   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TTEEEEECSCTT-STTTTTTTT------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcccc-ccccEEEecccc-chhhhhhhc------
Confidence            499999999999999999999999999999999998777666554433322 223455778998 445444443      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC-------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL-------  170 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~-------  170 (280)
                       ..+|+++|+++....     ..+.   ...+..|+.++.++++++    .+.+.-.++|++||..+......       
T Consensus        82 -~~~~~v~~~a~~~~~-----~~~~---~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~  148 (342)
T d1y1pa1          82 -KGAAGVAHIASVVSF-----SNKY---DEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             -TTCSEEEECCCCCSC-----CSCH---HHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             -ccchhhhhhcccccc-----cccc---cccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCCCCCccc
Confidence             378999999986532     1222   445778999999888876    23223569999999654321000       


Q ss_pred             ----------------------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          171 ----------------------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       171 ----------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                                            .....|+.+|.+.+.+++.++..+. .++++.++.|+.+-.+.
T Consensus       149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCC
T ss_pred             cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCC
Confidence                                  0123599999999999999988875 46888888888776553

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=6.5e-17  Score=138.87  Aligned_cols=170  Identities=17%  Similarity=0.166  Sum_probs=124.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChh---HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +||||||+|.||+++++.|+++|++|++++|...   ......+.+.     ..++.++++|++ +.+.+.++++..   
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~-d~~~l~~~~~~~---   72 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-----GKHPTFVEGDIR-NEALMTEILHDH---   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-----TSCCEEEECCTT-CHHHHHHHHHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-----CCCCEEEEeecC-CHHHHHHHHhcc---
Confidence            4999999999999999999999999999986322   2222222221     126888999999 667777776653   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC--------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ--------  169 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~--------  169 (280)
                        ++|+|||.|+....     ..+.++....+++|+.|+.++++++..    .+ -.++|++||...+....        
T Consensus        73 --~~d~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~----~~-v~~~i~~Ss~~vy~~~~~~~~~e~~  140 (338)
T d1udca_          73 --AIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRA----AN-VKNFIFSSSATVYGDQPKIPYVESF  140 (338)
T ss_dssp             --TCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCCSSSBCTTS
T ss_pred             --CCCEEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHH----hC-CCEEEecCcceEEcccccccccccc
Confidence              79999999986421     123345568899999999999998743    22 46899999876553211        


Q ss_pred             --CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          170 --LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       170 --~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                        ..+...|+.+|.+.+.+++..+.++  .++.+..++|+.+-.+.
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         141 PTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCC
T ss_pred             ccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEecc
Confidence              1235689999999999999888775  46788888888776653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=7.2e-16  Score=131.93  Aligned_cols=180  Identities=14%  Similarity=0.063  Sum_probs=128.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-----HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-----RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .|++|||||+|.||+++++.|.++|++|+.++|...     +...+......  .....+.++.+|++ +.+.+.+.++.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Di~-~~~~~~~~~~~   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN--VNKALMKLHYADLT-DASSLRRWIDV   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTT-CHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh--ccccceEEEEcccc-CHHHHHHHHhh
Confidence            489999999999999999999999999999998422     11111111111  01236778999999 67777777765


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-----  168 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-----  168 (280)
                      .     ++|++||.|+....     ....++....++.|..++..+..++.....+.....++++.||.......     
T Consensus        78 ~-----~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~  147 (339)
T d1n7ha_          78 I-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS  147 (339)
T ss_dssp             H-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBC
T ss_pred             h-----ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCC
Confidence            3     89999999987522     12334556788999999999988887665554434466666665433211     


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccc
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEIT  214 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~  214 (280)
                         +..+...|+.+|.+.+.+++.+++.+   ++.+..++|+.+..|..
T Consensus       148 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~  193 (339)
T d1n7ha_         148 ETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRR  193 (339)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             CCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCC
Confidence               11245689999999999999998876   79999999988877653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=1e-15  Score=133.85  Aligned_cols=178  Identities=13%  Similarity=0.097  Sum_probs=126.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC----------------hhHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----------------VDRLKSLCDEINKQSGSSVRAMAVELDVSA   82 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (280)
                      ||+||||||+|.||.+++++|++.|++|+.+|.-                ...............+  .++.++.+|++ 
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~Dl~-   77 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGDIC-   77 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESCTT-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC--CCcEEEEccCC-
Confidence            7899999999999999999999999999998621                0111122222222221  26788999999 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEecc
Q 023555           83 NGAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSI  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~  162 (280)
                      +.+.++++++..     ++|+|+|.|+....  +....+.+.....+++|+.|+.++++++.    +.+...++++.||.
T Consensus        78 d~~~l~~~~~~~-----~~d~ViHlAa~~~~--~~s~~~~~~~~~~~~~Nv~gt~nll~~~~----~~~~~~~~i~~ss~  146 (393)
T d1i24a_          78 DFEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIK----EFGEECHLVKLGTM  146 (393)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHH----HHCTTCEEEEECCG
T ss_pred             CHHHHHHHHHhh-----cchheecccccccc--ccccccccccccccccccccccHHHHHHH----Hhccccceeecccc
Confidence            778888887754     79999999987422  12234566677889999999999988763    33324567777775


Q ss_pred             ccccCC----------------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          163 AATSRG----------------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       163 ~~~~~~----------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                      ......                      +..+...|+.||.+.+.+++.++.++   ++.+.++.|+.+..+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         147 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            443210                      11123469999999999999998876   7899999998776543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=2.2e-16  Score=136.77  Aligned_cols=230  Identities=13%  Similarity=0.092  Sum_probs=151.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeE-EEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +||||||+|.||++++++|++.|+.| +++++......  ...+... ....++.++.+|++ +.+.++++++..     
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~-~~~~~~~~~~~Dl~-d~~~l~~~~~~~-----   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDI-SESNRYNFEHADIC-DSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTT-TTCTTEEEEECCTT-CHHHHHHHHHHH-----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhh-hhcCCcEEEEccCC-CHHHHHHHHHhC-----
Confidence            58999999999999999999999985 44554221100  0111111 12236888999999 677777777653     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc----CCCCeEEEEeccccccCC-------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDA----NQEGSVINISSIAATSRG-------  168 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~vv~vsS~~~~~~~-------  168 (280)
                      .+|+|||+|+....     ..+.++....+++|+.++.++++++.......    .+..++|++||...+...       
T Consensus        73 ~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (361)
T d1kewa_          73 QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccc
Confidence            79999999986422     11234446789999999999999987665321    113589999997755311       


Q ss_pred             ------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhcC-C---
Q 023555          169 ------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASRT-Y---  231 (280)
Q Consensus       169 ------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~---  231 (280)
                                  +..+...|+.||.+.+.+++.++..+   |+.+.+++|+.+..|....- .-..+........ .   
T Consensus       148 ~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~  224 (361)
T d1kewa_         148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred             cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEe
Confidence                        01123459999999999999999876   78899999998877653211 1112222222221 1   


Q ss_pred             ----CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          232 ----PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       232 ----p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                          ..+.+...+ |+++++..++...   ..|+.+++..|...
T Consensus       225 g~g~~~r~~i~v~-D~a~ai~~~~~~~---~~~~~~Ni~s~~~~  264 (361)
T d1kewa_         225 GKGDQIRDWLYVE-DHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             TTSCCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CCCCeEEeCEEHH-HHHHHHHHHHhcC---CCCCeEEECCCCCc
Confidence                112345566 9999888877543   23678888776543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=5.6e-16  Score=133.37  Aligned_cols=169  Identities=16%  Similarity=0.169  Sum_probs=121.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh----HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD----RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      |+||||||+|.||+++++.|+++|++|+++++...    ..... +.+.     ..++.++.+|++ +.+.+++++... 
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~-~~~~-----~~~v~~~~~Dl~-d~~~l~~~~~~~-   73 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLT-----KHHIPFYEVDLC-DRKGLEKVFKEY-   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH-HHHH-----TSCCCEEECCTT-CHHHHHHHHHHS-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH-Hhhc-----ccCCeEEEeecC-CHHHHHHHHhcc-
Confidence            78999999999999999999999999999875321    11211 1111     125778899999 777777776643 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC-------
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG-------  168 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~-------  168 (280)
                          ++|+|||+|+.....     ...+.-...+.+|+.++.++++++..    .+ ..++|++||...+...       
T Consensus        74 ----~~d~VihlAa~~~~~-----~~~~~~~~~~~~N~~~t~~ll~~~~~----~~-i~~~i~~SS~~vyg~~~~~~~~~  139 (347)
T d1z45a2          74 ----KIDSVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQ----YN-VSKFVFSSSATVYGDATRFPNMI  139 (347)
T ss_dssp             ----CCCEEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCCGGGSTTCC
T ss_pred             ----CCCEEEEcccccccc-----ccccCcccccccchhhhHHHHHHHHh----cc-cceEEeecceeeecCcccCCCCC
Confidence                799999999875221     12234456788999999999998732    22 4589999996654311       


Q ss_pred             ------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccC
Q 023555          169 ------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKS  211 (280)
Q Consensus       169 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t  211 (280)
                            +..+...|+.||.+.+.+++.+..... .++.+..++|+.+..
T Consensus       140 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         140 PIPEECPLGPTNPYGHTKYAIENILNDLYNSDK-KSWKFAILRYFNPIG  187 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHST-TSCEEEEEEECEEEC
T ss_pred             ccccccCCCCCChhHhHHHHHHHHHHHHHHhhc-cCCcEEEEeecceEe
Confidence                  112345799999999999998886543 467787887765544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.9e-15  Score=129.91  Aligned_cols=232  Identities=16%  Similarity=0.116  Sum_probs=149.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEec------ChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAAR------RVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r------~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      |+||||||+|.||++++++|++.|+.|+.+++      .........+.+....  ..++.++.+|++ +.+.+++++..
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~-d~~~l~~~~~~   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDIL-DQGALQRLFKK   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTT-CHHHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeecc-ccccccccccc
Confidence            78899999999999999999999999998864      1111111112222111  236888999999 67777776654


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC----
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ----  169 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~----  169 (280)
                           ..+++++|.|+..+.     ..+.++..+.+++|+.++.++++++    ++ .+-.++|++||........    
T Consensus        80 -----~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~----~~-~~v~~~i~~ss~~~~~~~~~~~~  144 (346)
T d1ek6a_          80 -----YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIM----KA-HGVKNLVFSSSATVYGNPQYLPL  144 (346)
T ss_dssp             -----CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHH----HH-TTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             -----cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchh----hh-cCcccccccccceeeeccccccc
Confidence                 378899999987532     1233445677899999999988876    22 3346899998876543211    


Q ss_pred             ------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccC--------cc---chhhhhhhhhcCC-
Q 023555          170 ------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEG--------LM---KKDWLNNVASRTY-  231 (280)
Q Consensus       170 ------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~--------~~---~~~~~~~~~~~~~-  231 (280)
                            ......|+.+|.+.+..++.++...  .++....+.|+.+..+-...        ..   -+........... 
T Consensus       145 ~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (346)
T d1ek6a_         145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (346)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             cccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCc
Confidence                  1234579999999999988876643  46788888887665542110        00   0111111111111 


Q ss_pred             --------C------CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          232 --------P------LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       232 --------p------~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                              +      .+++...+ |++.++..+.........++++++.+|..++
T Consensus       223 i~i~g~~~~~~~g~~~Rdfi~v~-D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  276 (346)
T d1ek6a_         223 LNVFGNDYDTEDGTGVRDYIHVV-DLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (346)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHH-HHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             EEEcCCcccCCCCCeeEeEEEEE-eccchhhhhccccccccCceEEEeCCCCccc
Confidence                    1      12356677 8988877765544555667889888876543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.65  E-value=2.7e-15  Score=128.65  Aligned_cols=230  Identities=13%  Similarity=0.062  Sum_probs=149.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC----hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ..+-|++|||||+|.||++++++|.+.|++|+.++|.    ..............  ....+.++.+|.. +........
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~-d~~~~~~~~   89 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK--QWSNFKFIQGDIR-NLDDCNNAC   89 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH--HHTTEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc--ccCCeeEEeeccc-ccccccccc
Confidence            4567899999999999999999999999999999862    22222221111111  1125778999998 543333222


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---  168 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---  168 (280)
                             ...+.++|.+.....     ..+.++....+++|+.|+.++++++.    + .+..++|++||...+...   
T Consensus        90 -------~~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~----~-~~~~~~i~~SS~~vyg~~~~~  152 (341)
T d1sb8a_          90 -------AGVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAAR----D-AKVQSFTYAASSSTYGDHPGL  152 (341)
T ss_dssp             -------TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHH----H-TTCSEEEEEEEGGGGTTCCCS
T ss_pred             -------ccccccccccccccc-----cccccCccchhheeehhHHHHHHHHH----h-cCCceEEEcccceeeCCCCCC
Confidence                   267888888865421     12456677899999999999999873    2 224699999997765321   


Q ss_pred             ------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc-----hhhhhhhhhc-CC-----
Q 023555          169 ------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK-----KDWLNNVASR-TY-----  231 (280)
Q Consensus       169 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~-----~~~~~~~~~~-~~-----  231 (280)
                            +..+...|+.+|.+.+.+++.+++.+   ++++..++|+.+..+.......     ..+....... ..     
T Consensus       153 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~  229 (341)
T d1sb8a_         153 PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGD  229 (341)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESS
T ss_pred             CccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCC
Confidence                  11234789999999999999999876   6888899998776654221110     1111121111 11     


Q ss_pred             --CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          232 --PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       232 --p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                        ..+.+...+ |++.++..++... ....|+.+.+..+-.
T Consensus       230 g~~~r~~i~v~-D~~~a~~~~~~~~-~~~~~~~~~~~~~~~  268 (341)
T d1sb8a_         230 GETSRDFCYIE-NTVQANLLAATAG-LDARNQVYNIAVGGR  268 (341)
T ss_dssp             SCCEECCEEHH-HHHHHHHHHHTCC-GGGCSEEEEESCSCC
T ss_pred             CCEEEEEEEEe-ccchhhhhhhhcc-ccccceeeeeccccc
Confidence              123355566 8888876666433 335677777765543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.9e-15  Score=128.55  Aligned_cols=215  Identities=10%  Similarity=0.037  Sum_probs=139.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-----HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-----RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      |++|||||+|.||++++++|.++|++|+.++|...     .++.+......  ....++.++.+|++ +.+.+.+++...
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~-d~~~~~~~~~~~   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA--HIEGNMKLHYGDLT-DSTCLVKIINEV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh--hccCCcEEEEeecC-CchhhHHHHhhc
Confidence            44599999999999999999999999999998542     11211111111  01236789999999 777777777654


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC------
Q 023555           95 WEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG------  168 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~------  168 (280)
                           .+++++|.++....     ....+.....+++|+.++.++++++..+-..  +..++|++||...+...      
T Consensus        79 -----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~  146 (347)
T d1t2aa_          79 -----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQASTSELYGKVQEIPQK  146 (347)
T ss_dssp             -----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGTCSCSSSSBC
T ss_pred             -----ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCC--CCcEEEEecchheecCCCCCCCC
Confidence                 78899998876421     1234455667899999999998877433211  13589999986643211      


Q ss_pred             ---CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chh----hhhhhhhcC--------CC
Q 023555          169 ---QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKD----WLNNVASRT--------YP  232 (280)
Q Consensus       169 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~----~~~~~~~~~--------~p  232 (280)
                         +..+...|+.||.+.+.+++.++..+   ++.+..++|+.+..+...... ...    .........        ..
T Consensus       147 E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~  223 (347)
T d1t2aa_         147 ETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDA  223 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcc
Confidence               11234579999999999999998875   688888898777665322211 111    111111111        11


Q ss_pred             CCCCCCChHHHHHHHHHhhcC
Q 023555          233 LRDFGTTDPALTSLVRYLVHD  253 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~  253 (280)
                      .+.+...+ |++.++..++..
T Consensus       224 ~r~~i~v~-D~~~a~~~~~~~  243 (347)
T d1t2aa_         224 KRDWGHAK-DYVEAMWLMLQN  243 (347)
T ss_dssp             EECCEEHH-HHHHHHHHHHHS
T ss_pred             eeeeeEec-HHHHHHHHHhhc
Confidence            22355666 899988777654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.1e-15  Score=119.24  Aligned_cols=201  Identities=16%  Similarity=0.144  Sum_probs=123.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |..|+|+||||||+||++++++|+++|++|.++.|+.+++...         ....+.++.+|++ +.+++.++++    
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~gD~~-d~~~l~~al~----   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---------GPRPAHVVVGDVL-QAADVDKTVA----   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---------SCCCSEEEESCTT-SHHHHHHHHT----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---------ccccccccccccc-chhhHHHHhc----
Confidence            5678899999999999999999999999999999998764321         1235778999999 6666666554    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC--CCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ--LPGGV  174 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~--~~~~~  174 (280)
                         +.|++|+++|...+.. ..           +++..++.++++    .+++.+ -.++|++||........  .+...
T Consensus        67 ---~~d~vi~~~g~~~~~~-~~-----------~~~~~~~~~l~~----aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~  126 (205)
T d1hdoa_          67 ---GQDAVIVLLGTRNDLS-PT-----------TVMSEGARNIVA----AMKAHG-VDKVVACTSAFLLWDPTKVPPRLQ  126 (205)
T ss_dssp             ---TCSEEEECCCCTTCCS-CC-----------CHHHHHHHHHHH----HHHHHT-CCEEEEECCGGGTSCTTCSCGGGH
T ss_pred             ---CCCEEEEEeccCCchh-hh-----------hhhHHHHHHHHH----HHHhcC-CCeEEEEeeeeccCCCcccccccc
Confidence               6899999998753221 11           122334444444    445543 56999999876543111  01112


Q ss_pred             CChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcCCCCCCCCCChHHHHHHHHHhhcCC
Q 023555          175 AYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRTYPLRDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       175 ~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~va~~~~~l~s~~  254 (280)
                      .|...|.+.+.+.       ...+++...|+||.+..........      ..........+...+ |+|..+...+...
T Consensus       127 ~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~------~~~~~~~~~~~i~~~-DvA~~~~~~l~~~  192 (205)
T d1hdoa_         127 AVTDDHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYT------VTLDGRGPSRVISKH-DLGHFMLRCLTTD  192 (205)
T ss_dssp             HHHHHHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCE------EESSSCSSCSEEEHH-HHHHHHHHTTSCS
T ss_pred             ccchHHHHHHHHH-------HhcCCceEEEecceecCCCCcccEE------EeeCCCCCCCcCCHH-HHHHHHHHHhCCC
Confidence            3444444444332       2358999999999874332111100      000001122234455 9999888887543


Q ss_pred             CCcccccEEEeCC
Q 023555          255 SEYVSGNIFIVDS  267 (280)
Q Consensus       255 ~~~i~G~~i~vdg  267 (280)
                       + ..|+.+.+.+
T Consensus       193 -~-~~g~~~~~s~  203 (205)
T d1hdoa_         193 -E-YDGHSTYPSH  203 (205)
T ss_dssp             -T-TTTCEEEEEC
T ss_pred             -C-CCCEEEecCC
Confidence             3 3477776643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.64  E-value=3.2e-15  Score=126.87  Aligned_cols=224  Identities=14%  Similarity=0.070  Sum_probs=145.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHH-HHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |+||||||+|.||+++++.|.++|++|+.++|..... ..-.+.+    ....++.++.+|++ +.+.+.+.+...    
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~----~~~~~~~~~~~Dl~-d~~~~~~~~~~~----   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL----GIEGDIQYEDGDMA-DACSVQRAVIKA----   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT----TCGGGEEEEECCTT-CHHHHHHHHHHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh----cccCCcEEEEcccc-ChHHhhhhhccc----
Confidence            7899999999999999999999999999999864321 1111111    12346889999999 677777766654    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------C
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------Q  169 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~  169 (280)
                       ..+++++.++.....     ...++....++.|+.++.+++.++.    +.+...++++.||..-....         +
T Consensus        72 -~~~~~~~~a~~~~~~-----~~~~~~~~~~~~n~~g~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~  141 (321)
T d1rpna_          72 -QPQEVYNLAAQSFVG-----ASWNQPVTTGVVDGLGVTHLLEAIR----QFSPETRFYQASTSEMFGLIQAERQDENTP  141 (321)
T ss_dssp             -CCSEEEECCSCCCHH-----HHTTSHHHHHHHHTHHHHHHHHHHH----HHCTTSEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             -ccccccccccccccc-----ccccchHHHHhhhhhchHHHHHHHH----HhCCCcccccccchhhcCcccCCCCCCCCC
Confidence             678888888654211     1112346678999999999888772    33334577777775433211         1


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccch----hhhhh-hhhcCC--------CCCCC
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKK----DWLNN-VASRTY--------PLRDF  236 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~----~~~~~-~~~~~~--------p~~~~  236 (280)
                      ......|+.+|.+.+.+++.++..+   ++.+..+.|+-+..|........    ..+.. ......        ..+.+
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~  218 (321)
T d1rpna_         142 FYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDW  218 (321)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEEC
T ss_pred             ccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEcc
Confidence            1245789999999999999999886   68888888887766643221111    11111 111111        11235


Q ss_pred             CCChHHHHHHHHHhhcCCCCcccccEEEeCCccc
Q 023555          237 GTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       237 ~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~  270 (280)
                      ...+ |+++++..++....    +..+++.+|..
T Consensus       219 i~v~-D~~~~~~~~~~~~~----~~~~ni~~~~~  247 (321)
T d1rpna_         219 GFAG-DYVEAMWLMLQQDK----ADDYVVATGVT  247 (321)
T ss_dssp             EEHH-HHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             EEeH-HHHHHHHHHHhcCC----cCCceeccccc
Confidence            6666 89998888775332    23466666543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=1.4e-15  Score=130.44  Aligned_cols=218  Identities=11%  Similarity=0.097  Sum_probs=145.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +||||||+|.||++++++|+++|. .|+.+++.........        ...++.++.+|+++. +.+.+.+.   +   
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~--------~~~~~~~i~~Di~~~-~~~~~~~~---~---   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDISIH-SEWIEYHV---K---   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT--------TCTTEEEEECCTTTC-SHHHHHHH---H---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc--------cCCCeEEEECccCCh-HHHHHHHH---h---
Confidence            589999999999999999999994 7988887654332221        123788999999843 33333221   1   


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC---------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL---------  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~---------  170 (280)
                      .+|++||+|+.....     ...++....+++|+.++.++++++    .+ . +-+.+++||...+.....         
T Consensus        67 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~----~~-~-~~~~~~~ss~~~~~~~~~~~~~~~~~~  135 (342)
T d2blla1          67 KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYC----VK-Y-RKRIIFPSTSEVYGMCSDKYFDEDHSN  135 (342)
T ss_dssp             HCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHH----HH-T-TCEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred             CCCcccccccccccc-----ccccCCcccccccccccccccccc----cc-c-ccccccccccccccccccccccccccc
Confidence            589999999875321     122334567999999999999987    22 2 356777777654432111         


Q ss_pred             -------CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---------hhhhhhhhhc-C---
Q 023555          171 -------PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---------KDWLNNVASR-T---  230 (280)
Q Consensus       171 -------~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---------~~~~~~~~~~-~---  230 (280)
                             .+...|+.||.+.+.+++.+++.+   |+.+..+.|..+..+.......         ..+....... .   
T Consensus       136 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  212 (342)
T d2blla1         136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  212 (342)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEE
T ss_pred             ccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccc
Confidence                   123569999999999999999886   7888888888877654332210         1111221111 1   


Q ss_pred             ----CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          231 ----YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       231 ----~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                          ...+.+...+ |++.++..++........|+.+++.+|
T Consensus       213 ~~~g~~~r~~i~v~-D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         213 IDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             GGGSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             cCCCCeeeeecccc-cccceeeeehhhccccCCCeEEEEecc
Confidence                1122356677 999998888875545556889998544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=7e-16  Score=130.92  Aligned_cols=216  Identities=11%  Similarity=0.050  Sum_probs=140.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh-HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+||||||+|.||++++++|.++|++|+.+++... ..+.. ...    ....++.....|..+.             .
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~----~~~~~~d~~~~~~~~~-------------~   62 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHW----IGHENFELINHDVVEP-------------L   62 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGG----TTCTTEEEEECCTTSC-------------C
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHh----cCCCceEEEehHHHHH-------------H
Confidence            378999999999999999999999999999986322 11111 111    1223455556555421             1


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------  168 (280)
                      +.++|+|||.|+......     ..++..+.+++|+.++.++++++.    +.  +.++|++||...+...         
T Consensus        63 ~~~~d~VihlAa~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~~~----~~--~~k~I~~SS~~vy~~~~~~~~~e~~  131 (312)
T d2b69a1          63 YIEVDQIYHLASPASPPN-----YMYNPIKTLKTNTIGTLNMLGLAK----RV--GARLLLASTSEVYGDPEVHPQSEDY  131 (312)
T ss_dssp             CCCCSEEEECCSCCSHHH-----HTTCHHHHHHHHHHHHHHHHHHHH----HH--TCEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             HcCCCEEEECcccCCchh-----HHhCHHHHHHHHHHHHHHHHHHHH----Hc--CCcEEEEEChheecCCCCCCCCccc
Confidence            237999999998653211     112345678999999999998762    22  3489999997554311         


Q ss_pred             -----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc---hhhhhhhhhc-CC-------C
Q 023555          169 -----QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK---KDWLNNVASR-TY-------P  232 (280)
Q Consensus       169 -----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~---~~~~~~~~~~-~~-------p  232 (280)
                           +..+...|+.||.+.+.+++.++..+   |+++..++|+.+..+.......   ..+....... ..       .
T Consensus       132 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~  208 (312)
T d2b69a1         132 WGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ  208 (312)
T ss_dssp             CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCC
T ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCe
Confidence                 11234579999999999999999886   7899999999988764322110   1122222111 11       1


Q ss_pred             CCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccC
Q 023555          233 LRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       233 ~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      .+.+...+ |+++++..++...    .+..+++.+|..+
T Consensus       209 ~r~~i~v~-D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         209 TRAFQYVS-DLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             EEECEEHH-HHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             eEccEEHH-HHHHHHHHHHhhc----cCCceEecCCccc
Confidence            23455566 9999888777433    3446787776554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=3e-15  Score=129.38  Aligned_cols=221  Identities=14%  Similarity=0.052  Sum_probs=146.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++.+||||||+|.||++++++|.++|++|+.+++.......      .   ......+..+|+. +.+.+.+++      
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~------~---~~~~~~~~~~D~~-~~~~~~~~~------   77 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT------E---DMFCDEFHLVDLR-VMENCLKVT------   77 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC------G---GGTCSEEEECCTT-SHHHHHHHH------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh------h---hcccCcEEEeech-hHHHHHHHh------
Confidence            56679999999999999999999999999999875432100      0   0113456778887 555444433      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------  168 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------  168 (280)
                       .++|.+||.|+.....    ....+.....+..|+.++.+++.++.    + .+-.++|++||.......         
T Consensus        78 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~~n~~gt~~ll~~~~----~-~~vk~~i~~SS~~~~~~~~~~~~~~~~  147 (363)
T d2c5aa1          78 -EGVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAAR----I-NGIKRFFYASSACIYPEFKQLETTNVS  147 (363)
T ss_dssp             -TTCSEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHH----H-TTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             -hcCCeEeecccccccc----cccccccccccccccchhhHHHHhHH----h-hCccccccccccccccccccccccccc
Confidence             2789999999765321    11223456678899999998888872    2 224699999997654311         


Q ss_pred             -------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-----chhhhhhhhhcC------
Q 023555          169 -------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-----KKDWLNNVASRT------  230 (280)
Q Consensus       169 -------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~------  230 (280)
                             +..+...|+.+|.+.+.+++.+.+++   |+.+..++|+.+..+......     ............      
T Consensus       148 ~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (363)
T d2c5aa1         148 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMW  224 (363)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEE
T ss_pred             cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCccccccccccccccccccccccccccc
Confidence                   01124579999999999999999886   789999999888765422111     001111111111      


Q ss_pred             ---CCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          231 ---YPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       231 ---~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                         ...+.+...+ |++.++..++...    .|+.+++-+|..++
T Consensus       225 g~g~~~rd~i~v~-D~~~~~~~~~~~~----~~~~~ni~~~~~~s  264 (363)
T d2c5aa1         225 GDGLQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVS  264 (363)
T ss_dssp             SCSCCEECCEEHH-HHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred             CCCCeEEEEeehh-HHHHHHHHHHhCC----CCCeEEEecCCccc
Confidence               1233466666 8898888877533    46678888776654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.61  E-value=8.3e-15  Score=124.83  Aligned_cols=223  Identities=14%  Similarity=0.108  Sum_probs=136.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecCh-hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      +||||||+|.||+++++.|.++|++|+.+++-. .........+..    ..++.++.+|++ +.+++.++++..     
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~----~~~~~~i~~Di~-~~~~l~~~~~~~-----   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIR-NKNDVTRLITKY-----   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTT-CHHHHHHHHHHH-----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc----cCCcEEEEcccC-CHHHHHHHHHhc-----
Confidence            589999999999999999999999999887421 111122222222    236788999999 677777777654     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC----------
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ----------  169 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~----------  169 (280)
                      ++|++||+|+....     ....++....+++|+.|+.++++++..    .+ ..+.|+.||........          
T Consensus        72 ~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~----~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~  141 (338)
T d1orra_          72 MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQ----YN-SNCNIIYSSTNKVYGDLEQYKYNETET  141 (338)
T ss_dssp             CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----HC-TTCEEEEEEEGGGGTTCTTSCEEECSS
T ss_pred             CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhc----cc-ccccccccccccccccccccccccccc
Confidence            78999999987521     112334577899999999999987633    22 34555555544322110          


Q ss_pred             ----------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCccc-----CccccCccchhhhhhhh-
Q 023555          170 ----------------LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFK-----SEITEGLMKKDWLNNVA-  227 (280)
Q Consensus       170 ----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~-----t~~~~~~~~~~~~~~~~-  227 (280)
                                      ......|+.+|...+.+....+..+.   +....+.|..+.     ........ ........ 
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  217 (338)
T d1orra_         142 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG---LNTVVFRHSSMYGGRQFATYDQGWV-GWFCQKAVE  217 (338)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTCCCBTTBCHH-HHHHHHHHH
T ss_pred             cccccccccCcccCCccccccccccccchhhhhhhhhhhccC---cccccccccceeecccccccccccc-chhhHHHHH
Confidence                            11345789999999999999998874   333333332222     11111111 11111111 


Q ss_pred             -----hcCC-------CCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcc
Q 023555          228 -----SRTY-------PLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       228 -----~~~~-------p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                           .+..       ..+.+...+ |++.++..++.. .....|+.+.+.+|.
T Consensus       218 ~~~~~~~~~~~~g~g~~~r~~~~v~-D~~~~~~~~l~~-~~~~~~~~~~i~~~~  269 (338)
T d1orra_         218 IKNGINKPFTISGNGKQVRDVLHAE-DMISLYFTALAN-VSKIRGNAFNIGGTI  269 (338)
T ss_dssp             HHTTCCCCEEEESSSCCEEECEEHH-HHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             HHhccCCceEEeCCCceeEeeeccc-chhhHHHHHHhc-cccccCccccccccc
Confidence                 0001       112344566 888888776642 234678888886653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.2e-15  Score=123.92  Aligned_cols=161  Identities=17%  Similarity=0.158  Sum_probs=114.9

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ..++|++|+||||||||.||+++++.|.++|.  +|++++|++......         ....+....+|+. +.+++   
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---------~~~~i~~~~~D~~-~~~~~---   74 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFE-KLDDY---   74 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGG-GGGGG---
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---------ccceeeeeeeccc-ccccc---
Confidence            34468899999999999999999999999996  799999976432210         1125666778887 44333   


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQL  170 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~  170 (280)
                          .+.+...|++||++|..        ..........++|+.++..+++.+    .+ .+-.++|++|+.....    
T Consensus        75 ----~~~~~~~d~vi~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a----~~-~~v~~fi~~Ss~~~~~----  133 (232)
T d2bkaa1          75 ----ASAFQGHDVGFCCLGTT--------RGKAGAEGFVRVDRDYVLKSAELA----KA-GGCKHFNLLSSKGADK----  133 (232)
T ss_dssp             ----GGGGSSCSEEEECCCCC--------HHHHHHHHHHHHHTHHHHHHHHHH----HH-TTCCEEEEECCTTCCT----
T ss_pred             ----ccccccccccccccccc--------ccccchhhhhhhcccccceeeecc----cc-cCccccccCCcccccc----
Confidence                23345799999999864        123455667888999999888877    22 3356899999977643    


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCe-EEEEeecCcccCccc
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKI-RVNSICPGLFKSEIT  214 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi-~vn~v~pG~v~t~~~  214 (280)
                      .....|+.+|...+...+.    +   +. ++..++||.+..+..
T Consensus       134 ~~~~~Y~~~K~~~E~~l~~----~---~~~~~~IlRP~~i~G~~~  171 (232)
T d2bkaa1         134 SSNFLYLQVKGEVEAKVEE----L---KFDRYSVFRPGVLLCDRQ  171 (232)
T ss_dssp             TCSSHHHHHHHHHHHHHHT----T---CCSEEEEEECCEEECTTG
T ss_pred             CccchhHHHHHHhhhcccc----c---cccceEEecCceeecCCC
Confidence            3345799999988765432    2   33 577899999877643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=4.2e-15  Score=125.89  Aligned_cols=154  Identities=14%  Similarity=0.130  Sum_probs=115.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|+||||||+|.||++++++|+++|+.|+++++..                       .+|+. +.+.++.+++.-    
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~-~~~~~~~~~~~~----   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLL-DSRAVHDFFASE----   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTT-CHHHHHHHHHHH----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hcccc-CHHHHHHHHhhc----
Confidence            57899999999999999999999999988776532                       24777 566676666532    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC---------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ---------  169 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~---------  169 (280)
                       .+|.++|.|+..+..    .....+..+.+++|+.++.++++++.    +. +-.++|++||...+....         
T Consensus        54 -~~d~v~~~a~~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~a~----~~-~v~~~i~~SS~~vyg~~~~~~~~E~~~  123 (315)
T d1e6ua_          54 -RIDQVYLAAAKVGGI----VANNTYPADFIYQNMMIESNIIHAAH----QN-DVNKLLFLGSSCIYPKLAKQPMAESEL  123 (315)
T ss_dssp             -CCSEEEECCCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHH----HT-TCCEEEEECCGGGSCTTCCSSBCGGGT
T ss_pred             -CCCEEEEcchhcccc----ccchhhHHHHHHHHHHHHHHHHHHHH----Hc-CCCEEEEECCceEcCCCCCCCccCCcc
Confidence             789999999765221    12334455678899999999988772    22 245899999987654211         


Q ss_pred             -----CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          170 -----LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       170 -----~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                           .+....|+.||.+.+.+++.+.+++   |+++..++|+.+..|.
T Consensus       124 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         124 LQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence                 1122469999999999999999886   7899999998887654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.59  E-value=5.8e-15  Score=126.83  Aligned_cols=222  Identities=13%  Similarity=0.105  Sum_probs=138.4

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      .|.||||||+|.||+++++.|.++|+.|.++.++...-......+...  ...++.++.+|++ +.+.+..++.      
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~-d~~~~~~~~~------   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIA-DAELVDKLAA------   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTT-CHHHHHHHHT------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCC-CHHHHHHHHh------
Confidence            478999999999999999999999997655544210000000000011  1237888999998 6666666543      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----------
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----------  168 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----------  168 (280)
                       ..+.++|.|+.....     ...++....+++|+.++.+++.++..    .  +.++|++||...+...          
T Consensus        73 -~~~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~~~----~--~~k~i~~ss~~vyg~~~~~~~~~~~~  140 (346)
T d1oc2a_          73 -KADAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARK----Y--DIRFHHVSTDEVYGDLPLREDLPGHG  140 (346)
T ss_dssp             -TCSEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHH----H--TCEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             -hhhhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhhcc----c--cccccccccceEecccCccccccccc
Confidence             678899998765221     12234456789999999999887622    2  3478888876544211          


Q ss_pred             -----------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-chhhhhhhhhc-------
Q 023555          169 -----------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-KKDWLNNVASR-------  229 (280)
Q Consensus       169 -----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-~~~~~~~~~~~-------  229 (280)
                                 +..+...|+.+|.+.+.+++.+.+++   |+++.+++|+.+..|...... -..+.......       
T Consensus       141 ~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~  217 (346)
T d1oc2a_         141 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYG  217 (346)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEET
T ss_pred             cCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeC
Confidence                       01123569999999999999998876   899999999988775422111 11111111111       


Q ss_pred             -CCCCCCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCc
Q 023555          230 -TYPLRDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       230 -~~p~~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
                       ....+.+...+ |+++++..+.....   .|..+.+-+|
T Consensus       218 ~g~~~r~~i~v~-D~a~a~~~~~~~~~---~~~~~~~~~~  253 (346)
T d1oc2a_         218 EGKNVRDWIHTN-DHSTGVWAILTKGR---MGETYLIGAD  253 (346)
T ss_dssp             TSCCEEECEEHH-HHHHHHHHHHHHCC---TTCEEEECCS
T ss_pred             CCCccccccchh-hHHHHHHHHHhhcc---cCcccccccc
Confidence             11223456666 89998877664332   2344444443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.58  E-value=3.1e-15  Score=127.31  Aligned_cols=222  Identities=19%  Similarity=0.228  Sum_probs=145.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEE------ecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAA------ARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~------~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +||||||+|.||+++++.|.++|+.|..+      ++..  .....    +.. .....++.++.+|.+ +.......  
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~----~~~-~~~~~~~~~~~~d~~-~~~~~~~~--   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN----LAP-VDADPRLRFVHGDIR-DAGLLARE--   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG----GGG-GTTCTTEEEEECCTT-CHHHHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhH----hhh-hhcCCCeEEEEeccc-cchhhhcc--
Confidence            58999999999999999999999865433      2211  11110    111 112347889999998 54433322  


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC----
Q 023555           93 KAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG----  168 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~----  168 (280)
                           ...+|.++|.|+....     ....+.....+++|+.++.++++++.    + .+..++|++||...+...    
T Consensus        74 -----~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~----~-~~~~~~I~~Ss~~~yg~~~~~~  138 (322)
T d1r6da_          74 -----LRGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAV----D-AGVGRVVHVSTNQVYGSIDSGS  138 (322)
T ss_dssp             -----TTTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHH----H-TTCCEEEEEEEGGGGCCCSSSC
T ss_pred             -----ccccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHH----H-cCCceEEEeecceeecCCCCCC
Confidence                 2378999999976422     12344556778999999999999873    2 225689999997765321    


Q ss_pred             -----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCc-cchhhhhhhhhc-CCC-------CC
Q 023555          169 -----QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGL-MKKDWLNNVASR-TYP-------LR  234 (280)
Q Consensus       169 -----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~-~~~~~~~~~~~~-~~p-------~~  234 (280)
                           +..+...|+.+|.+.+.+++.+++++   |+.+..++|+.+..+..... .-..+....... ..+       .+
T Consensus       139 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r  215 (322)
T d1r6da_         139 WTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR  215 (322)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEE
Confidence                 11234689999999999999999886   79999999998877643211 111122222221 111       12


Q ss_pred             CCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          235 DFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       235 ~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      .+...+ |+++++..++....   .|+.+++..|-.++
T Consensus       216 ~~i~v~-D~a~ai~~~~~~~~---~~~~~ni~~~~~~s  249 (322)
T d1r6da_         216 EWVHTD-DHCRGIALVLAGGR---AGEIYHIGGGLELT  249 (322)
T ss_dssp             EEEEHH-HHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             ccEEHH-HHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence            345566 99999988886443   47888887775543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.57  E-value=3.3e-14  Score=122.15  Aligned_cols=178  Identities=17%  Similarity=0.127  Sum_probs=127.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+||+||||||+|.||+++++.|.++|++|+.++|+..+.....+...    ....+.++.+|++ +.+.+.++++..  
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~----~~~~i~~~~~Dl~-d~~~l~~~~~~~--   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIR-DQNKLLESIREF--   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTT-CHHHHHHHHHHH--
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh----cccCCeEEEeecc-ChHhhhhhhhhc--
Confidence            689999999999999999999999999999999998765443333221    1235888999999 677777766654  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------  168 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------  168 (280)
                         .+|+++|.|+....     ..+.+.....+.+|+.++.++++++..    .+....+++.|+.......        
T Consensus        79 ---~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~  146 (356)
T d1rkxa_          79 ---QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRH----VGGVKAVVNITSDKCYDNKEWIWGYRE  146 (356)
T ss_dssp             ---CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HCCCCEEEEECCGGGBCCCCSSSCBCT
T ss_pred             ---hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhc----ccccccccccccccccccccccccccc
Confidence               88999999986422     123455677899999999998888732    2223455555544332211        


Q ss_pred             --CCCCCCCChhhHHHHHHHHHHHHHHhCC------CCeEEEEeecCcccCcc
Q 023555          169 --QLPGGVAYASSKAGLNAMTKCLSLELGV------HKIRVNSICPGLFKSEI  213 (280)
Q Consensus       169 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~------~gi~vn~v~pG~v~t~~  213 (280)
                        +..+...|+.+|.+.+.+++.++.++..      .++.+..+.|+.+..+.
T Consensus       147 ~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         147 NEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             TSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             ccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence              1113456999999999999998887643      46788888888765543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.50  E-value=4.3e-13  Score=108.26  Aligned_cols=216  Identities=13%  Similarity=0.027  Sum_probs=128.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCe--EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCR--IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~--v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++||||||+|+||+++++.|+++|+.  |+.+.|++++....          ..++.++.+|++ +.++..++++     
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~----------~~~~~~~~~d~~-~~~~~~~~~~-----   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----------GGEADVFIGDIT-DADSINPAFQ-----   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----------TCCTTEEECCTT-SHHHHHHHHT-----
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc----------cCCcEEEEeeec-cccccccccc-----
Confidence            79999999999999999999999976  55667877654432          125667899998 6666655544     


Q ss_pred             cCCccEEEECCCCCCCCCC--------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCC
Q 023555           98 FGRIDALVNNAGVSGAVKS--------PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQ  169 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~  169 (280)
                        ++|.+||+++.......        ..............+|+.++..++.....    . ..+...+.++...... .
T Consensus        68 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~s~~~~~~~-~  139 (252)
T d2q46a1          68 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----A-GVKHIVVVGSMGGTNP-D  139 (252)
T ss_dssp             --TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----H-TCSEEEEEEETTTTCT-T
T ss_pred             --cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccc----c-cccccccccccccCCC-C
Confidence              78999999976432111        01111223445667888888877765522    2 2467777777655431 1


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh-hhhhhhhcCCCCCCCCCChHHHHHHHH
Q 023555          170 LPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD-WLNNVASRTYPLRDFGTTDPALTSLVR  248 (280)
Q Consensus       170 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~va~~~~  248 (280)
                      .+....+...+.....+...+..+   .|+++..++||.+..+......... ......   .....+...+ |+|+++.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~---~~~~~~i~~~-Dva~a~~  212 (252)
T d2q46a1         140 HPLNKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDDELL---QTDTKTVPRA-DVAEVCI  212 (252)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTTGGG---GSSCCEEEHH-HHHHHHH
T ss_pred             cccccccccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCcccc---cCCCCeEEHH-HHHHHHH
Confidence            122222222333333333333333   4789999999988766432211000 000000   0111233455 9999988


Q ss_pred             HhhcCCCCcccccEEEeCCc
Q 023555          249 YLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG  268 (280)
                      .++...  ...|+.+++-++
T Consensus       213 ~~l~~~--~~~g~~~~i~~~  230 (252)
T d2q46a1         213 QALLFE--EAKNKAFDLGSK  230 (252)
T ss_dssp             HHTTCG--GGTTEEEEEEEC
T ss_pred             HHhCCc--cccCcEEEEeeC
Confidence            877533  356888888544

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.48  E-value=1.1e-12  Score=113.98  Aligned_cols=177  Identities=16%  Similarity=0.124  Sum_probs=122.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHH-hCCeEEEEec---------ChhHHHHHHHHHHhhcC-----CCcceEEEEeccCCC
Q 023555           19 NKVVMVTGASSGLGREFCLDLAK-AGCRIVAAAR---------RVDRLKSLCDEINKQSG-----SSVRAMAVELDVSAN   83 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~r---------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~   83 (280)
                      +.+||||||+|.||++++++|++ .|++|+++|+         ..+..+.....+.....     ......++.+|++ +
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d   80 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR-N   80 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT-C
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECccc-C
Confidence            34699999999999999999986 6899999874         11223333333322111     1235778899999 6


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccc
Q 023555           84 GAAIENSVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIA  163 (280)
Q Consensus        84 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~  163 (280)
                      .+.++++++    ...++|+|+|.|+....     ....+.....+++|+.++..+++++.    + .+..+++++++..
T Consensus        81 ~~~l~~~~~----~~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~----~-~~~~~~~~~~s~~  146 (383)
T d1gy8a_          81 EDFLNGVFT----RHGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAML----L-HKCDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHH----HSCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----H-TTCCEEEEEEEGG
T ss_pred             HHHhhhhhh----ccceeehhhcccccccc-----cccccccccccccccccccccchhhh----c-cCCcccccccccc
Confidence            555555554    45689999999987522     12234456678899999999988873    2 2245777777755


Q ss_pred             cccCC----------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCcc
Q 023555          164 ATSRG----------------QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEI  213 (280)
Q Consensus       164 ~~~~~----------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~  213 (280)
                      .....                ...+...|+.+|.+.+.+++.+...+   |+.+.+++|+.+..+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccC
Confidence            43211                11134679999999999999998876   7899999998776554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.34  E-value=2.9e-13  Score=107.96  Aligned_cols=189  Identities=16%  Similarity=0.125  Sum_probs=113.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|+||||||||.||++++++|.++|+  +|+...|+...             ...++   ..+.. +..   +..+   .
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------------~~~~~---~~~~~-d~~---~~~~---~   58 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRL---DNPVG-PLA---ELLP---Q   58 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTE---ECCBS-CHH---HHGG---G
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------------hcccc---ccccc-chh---hhhh---c
Confidence            48999999999999999999999998  56666665321             01122   33333 221   1211   2


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCC
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAY  176 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y  176 (280)
                      ..+.+|.+|+++|.....       ...-....++|+.++..+++++    ++ .+-.+++++||..+..    .....|
T Consensus        59 ~~~~~d~vi~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~a----~~-~~v~~~i~~Ss~~~~~----~~~~~y  122 (212)
T d2a35a1          59 LDGSIDTAFCCLGTTIKE-------AGSEEAFRAVDFDLPLAVGKRA----LE-MGARHYLVVSALGADA----KSSIFY  122 (212)
T ss_dssp             CCSCCSEEEECCCCCHHH-------HSSHHHHHHHHTHHHHHHHHHH----HH-TTCCEEEEECCTTCCT----TCSSHH
T ss_pred             cccchheeeeeeeeeccc-------cccccccccchhhhhhhccccc----cc-cccccccccccccccc----ccccch
Confidence            235789999999864111       1122457788999998888876    22 3357999999876543    345679


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCe-EEEEeecCcccCccccCccchhhhhhhhhcCCCC-CCCCCChHHHHHHHHHhhcCC
Q 023555          177 ASSKAGLNAMTKCLSLELGVHKI-RVNSICPGLFKSEITEGLMKKDWLNNVASRTYPL-RDFGTTDPALTSLVRYLVHDS  254 (280)
Q Consensus       177 ~~sK~a~~~l~~~la~~~~~~gi-~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~va~~~~~l~s~~  254 (280)
                      ..+|...+...+       ..+. ++..++|+.+..+...... ............+- .+....+ |+|.++..++...
T Consensus       123 ~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~-DvA~ai~~~~~~~  193 (212)
T d2a35a1         123 NRVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRL-AEILAAPIARILPGKYHGIEAC-DLARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEG-GGGTTCCCC----CHHHHHHHH-HHHHHHHHHHTCC
T ss_pred             hHHHHHHhhhcc-------ccccccceeeCCcceeCCcccccH-HHHHHHHHhhccCCCCcEEEHH-HHHHHHHHHHcCC
Confidence            999988775543       2233 5778999998765432111 11110000000000 0112334 8999988888654


Q ss_pred             C
Q 023555          255 S  255 (280)
Q Consensus       255 ~  255 (280)
                      .
T Consensus       194 ~  194 (212)
T d2a35a1         194 G  194 (212)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.32  E-value=2e-11  Score=104.48  Aligned_cols=209  Identities=11%  Similarity=0.072  Sum_probs=121.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +.|+|+||||||.||++++++|.++|++|+++.|+..+...  ..+..    ...+..+.+|+.+..+.++.+       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~----~~~v~~~~gD~~d~~~~~~~a-------   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA----IPNVTLFQGPLLNNVPLMDTL-------   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT----STTEEEEESCCTTCHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc----cCCCEEEEeeCCCcHHHHHHH-------
Confidence            57999999999999999999999999999999998765432  12211    125778899998543323322       


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                      +...|.++.+.....       ..          ++....+++.++    .+.+ ..++++.||..............|.
T Consensus        69 ~~~~~~~~~~~~~~~-------~~----------~~~~~~~~~~aa----~~ag-v~~~v~~Ss~~~~~~~~~~~~~~~~  126 (350)
T d1xgka_          69 FEGAHLAFINTTSQA-------GD----------EIAIGKDLADAA----KRAG-TIQHYIYSSMPDHSLYGPWPAVPMW  126 (350)
T ss_dssp             HTTCSEEEECCCSTT-------SC----------HHHHHHHHHHHH----HHHS-CCSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             hcCCceEEeeccccc-------ch----------hhhhhhHHHHHH----HHhC-CCceEEEeeccccccCCcccchhhh
Confidence            346788777654321       01          122233344443    2222 4577777876544322333445677


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccc----hhhhhhhhhcCCCCCC-----CCCChHHHHHHHH
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMK----KDWLNNVASRTYPLRD-----FGTTDPALTSLVR  248 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~p~~~-----~~~~~~~va~~~~  248 (280)
                      .+|...+.+.+.       .++....+.|+.+..........    ............|...     +....+|++.++.
T Consensus       127 ~~k~~~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~  199 (350)
T d1xgka_         127 APKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALL  199 (350)
T ss_dssp             HHHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHH
T ss_pred             hhHHHHHHHHHh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHH
Confidence            778766544332       35677888888765543221110    0000000000011110     1223348999888


Q ss_pred             HhhcCCCCcccccEEEeCCc
Q 023555          249 YLVHDSSEYVSGNIFIVDSG  268 (280)
Q Consensus       249 ~l~s~~~~~i~G~~i~vdgG  268 (280)
                      .++.+..+...|+.+.+.|.
T Consensus       200 ~~l~~~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         200 QIFKDGPQKWNGHRIALTFE  219 (350)
T ss_dssp             HHHHHCHHHHTTCEEEECSE
T ss_pred             HHHhCChhhcCCeEEEEeCC
Confidence            88765555668888888764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.22  E-value=2.8e-11  Score=101.19  Aligned_cols=215  Identities=8%  Similarity=0.054  Sum_probs=115.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH-HHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .++||||||||.||++++++|.++|++|+++.|+..... ...+.+....  ...+.++.+|+. +.+.+.+.+.     
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~-d~~~~~~~~~-----   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLD-DHQRLVDALK-----   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSS-CHHHHHHHHT-----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecc-cchhhhhhcc-----
Confidence            455999999999999999999999999999999753211 1111111111  125778899998 5555555443     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCCCh
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVAYA  177 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~Y~  177 (280)
                        ..+.++++++.....                .|..+...++.++    .+.. ..++++.||...... .......|.
T Consensus        75 --~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~a----~~~~-~~~~v~~Ss~g~~~~-~~~~~~~~~  130 (312)
T d1qyda_          75 --QVDVVISALAGGVLS----------------HHILEQLKLVEAI----KEAG-NIKRFLPSEFGMDPD-IMEHALQPG  130 (312)
T ss_dssp             --TCSEEEECCCCSSSS----------------TTTTTHHHHHHHH----HHSC-CCSEEECSCCSSCTT-SCCCCCSST
T ss_pred             --Ccchhhhhhhhcccc----------------cchhhhhHHHHHH----HHhc-CCcEEEEeeccccCC-Ccccccchh
Confidence              678888888653111                1233334444443    2222 457777776543321 112223344


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhh----h---hhhcCCCCCCCCCChHHHHHHHHHh
Q 023555          178 SSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLN----N---VASRTYPLRDFGTTDPALTSLVRYL  250 (280)
Q Consensus       178 ~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~----~---~~~~~~p~~~~~~~~~~va~~~~~l  250 (280)
                      .++......++.+..+   .++.+..+.|+.+..+............    +   ..........+...+ |+|+++..+
T Consensus       131 ~~~~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-Dva~a~~~~  206 (312)
T d1qyda_         131 SITFIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDED-DVGTYTIKS  206 (312)
T ss_dssp             THHHHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHH-HHHHHHHHH
T ss_pred             hhhhHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHH-HHHHHHHHH
Confidence            4444444444444433   3677788888877543322111000000    0   000001112245566 999988877


Q ss_pred             hcCCCCcccccEEEeCCccc
Q 023555          251 VHDSSEYVSGNIFIVDSGAT  270 (280)
Q Consensus       251 ~s~~~~~i~G~~i~vdgG~~  270 (280)
                      +.. ....++..+.+.++..
T Consensus       207 l~~-~~~~~~~~~~~~~~~~  225 (312)
T d1qyda_         207 IDD-PQTLNKTMYIRPPMNI  225 (312)
T ss_dssp             TTC-GGGSSSEEECCCGGGE
T ss_pred             hcC-ccccCceEEEeCCCcC
Confidence            743 2333444455555543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.15  E-value=9.5e-11  Score=97.24  Aligned_cols=212  Identities=12%  Similarity=0.109  Sum_probs=116.7

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHH--HHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL--KSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..|+||||||||.||++++++|.++|++|++++|+....  ......+.....  ..+.++.+|+. +.....+.++   
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~-~~~~~~~~~~---   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSID-DHASLVEAVK---   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTT-CHHHHHHHHH---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc--CCcEEEEeecc-cchhhhhhhh---
Confidence            357899999999999999999999999999999964331  111112222111  24677889998 5555555544   


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCCCC
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGGVA  175 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~~~  175 (280)
                          ..+.++++++...                    ..+...+.+++    .... ...+++.||.....  .......
T Consensus        76 ----~~~~vi~~~~~~~--------------------~~~~~~~~~a~----~~~~-~~~~~~~s~~~~~~--~~~~~~~  124 (307)
T d1qyca_          76 ----NVDVVISTVGSLQ--------------------IESQVNIIKAI----KEVG-TVKRFFPSEFGNDV--DNVHAVE  124 (307)
T ss_dssp             ----TCSEEEECCCGGG--------------------SGGGHHHHHHH----HHHC-CCSEEECSCCSSCT--TSCCCCT
T ss_pred             ----hceeeeecccccc--------------------cchhhHHHHHH----HHhc-cccceeeecccccc--ccccccc
Confidence                6789999886531                    11222333333    2222 35667766644322  2223334


Q ss_pred             ChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchh------hhhhhhhcCCCCCCCCCChHHHHHHHHH
Q 023555          176 YASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKD------WLNNVASRTYPLRDFGTTDPALTSLVRY  249 (280)
Q Consensus       176 Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~p~~~~~~~~~~va~~~~~  249 (280)
                      +...+............+   .++....+.|+.+..+....+....      .........-....+...+ |+|.++..
T Consensus       125 ~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~  200 (307)
T d1qyca_         125 PAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEE-DIGTFTIK  200 (307)
T ss_dssp             THHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHH-HHHHHHHT
T ss_pred             cccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHH-HHHHHHHH
Confidence            444444444444444444   3677888899887654322211100      0000011111223355666 99999988


Q ss_pred             hhcCCCCcccccEEEeCCcccC
Q 023555          250 LVHDSSEYVSGNIFIVDSGATL  271 (280)
Q Consensus       250 l~s~~~~~i~G~~i~vdgG~~~  271 (280)
                      ++... ...++..+.+.+|..+
T Consensus       201 ~l~~~-~~~~~~~~~~~~~~~~  221 (307)
T d1qyca_         201 AVDDP-RTLNKTLYLRLPANTL  221 (307)
T ss_dssp             TSSCG-GGTTEEEECCCGGGEE
T ss_pred             HhcCh-hhcCceeEEeCCCCcc
Confidence            87533 2333444444445443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.11  E-value=1.2e-10  Score=96.57  Aligned_cols=131  Identities=21%  Similarity=0.152  Sum_probs=90.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      +||||||+|.||+++++.|.+.|..|.+ +++...                    ...|++ +.+.++++++..     +
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~--------------------~~~Dl~-~~~~~~~~i~~~-----~   54 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE--------------------FCGDFS-NPKGVAETVRKL-----R   54 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS--------------------SCCCTT-CHHHHHHHHHHH-----C
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc--------------------ccCcCC-CHHHHHHHHHHc-----C
Confidence            4999999999999999999999965544 443210                    246888 677777777654     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CCC
Q 023555          101 IDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QLP  171 (280)
Q Consensus       101 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~~  171 (280)
                      +|+|||+||......     ..+.-...+++|+.++..+..++     +. .+.+++++||.......         +..
T Consensus        55 ~D~Vih~Aa~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~-----~~-~~~~~~~~ss~~~~~~~~~~~~~E~~~~~  123 (298)
T d1n2sa_          55 PDVIVNAAAHTAVDK-----AESEPELAQLLNATSVEAIAKAA-----NE-TGAWVVHYSTDYVFPGTGDIPWQETDATS  123 (298)
T ss_dssp             CSEEEECCCCCCHHH-----HTTCHHHHHHHHTHHHHHHHHHH-----TT-TTCEEEEEEEGGGSCCCTTCCBCTTSCCC
T ss_pred             CCEEEEecccccccc-----cccCccccccccccccccchhhh-----hc-cccccccccccccccCCCCCCCccccccC
Confidence            899999998753211     11223567789999999888876     22 25688888886543211         112


Q ss_pred             CCCCChhhHHHHHHHHHH
Q 023555          172 GGVAYASSKAGLNAMTKC  189 (280)
Q Consensus       172 ~~~~Y~~sK~a~~~l~~~  189 (280)
                      +...|+.+|.+.+.+.+.
T Consensus       124 p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         124 PLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             CSSHHHHHHHHHHHHHHH
T ss_pred             CCchHhhhhhhhhhhHHh
Confidence            346799999888765543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.10  E-value=3.7e-10  Score=92.97  Aligned_cols=195  Identities=17%  Similarity=0.214  Sum_probs=119.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      .+||||||+|.||++++++|.++|++|+.++|+.                        +|++ +.++++++++..     
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------------~D~~-d~~~~~~~l~~~-----   51 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------------LDIT-NVLAVNKFFNEK-----   51 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------------CCTT-CHHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------------ccCC-CHHHHHHHHHHc-----
Confidence            3599999999999999999999999999998852                        3777 677777777654     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC---------CC
Q 023555          100 RIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG---------QL  170 (280)
Q Consensus       100 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~---------~~  170 (280)
                      ++|++||+++....     +.........+..|+.....+...+    ...  ...+++.||.......         ..
T Consensus        52 ~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~----~~~--~~~~~~~ss~~v~~~~~~~~~~e~~~~  120 (281)
T d1vl0a_          52 KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAA----YSV--GAEIVQISTDYVFDGEAKEPITEFDEV  120 (281)
T ss_dssp             CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHH----HHH--TCEEEEEEEGGGSCSCCSSCBCTTSCC
T ss_pred             CCCEEEeecccccc-----ccccccchhhccccccccccccccc----ccc--cccccccccceeeeccccccccccccc
Confidence            78999999986522     1123334556677777776665544    222  3466666664332211         11


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCccchhhhhhhhhcC------CCCCCCCCChHHHH
Q 023555          171 PGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLMKKDWLNNVASRT------YPLRDFGTTDPALT  244 (280)
Q Consensus       171 ~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~~~va  244 (280)
                      .....|+.+|.+.+.+++.    +   +.+...+.|+.+..+-...  ............      --.+.+...+ |++
T Consensus       121 ~~~~~~~~~k~~~e~~~~~----~---~~~~~i~R~~~vyG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~-D~~  190 (281)
T d1vl0a_         121 NPQSAYGKTKLEGENFVKA----L---NPKYYIVRTAWLYGDGNNF--VKTMINLGKTHDELKVVHDQVGTPTSTV-DLA  190 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHH----H---CSSEEEEEECSEESSSSCH--HHHHHHHHHHCSEEEEESSCEECCEEHH-HHH
T ss_pred             cchhhhhhhhhHHHHHHHH----h---CCCccccceeEEeCCCccc--ccchhhhhccCCceeecCCceeccchhh-hhh
Confidence            2445688888777655432    2   4567789999886653221  111111111110      0112345566 889


Q ss_pred             HHHHHhhcCCCCcccccEEEeCCcc
Q 023555          245 SLVRYLVHDSSEYVSGNIFIVDSGA  269 (280)
Q Consensus       245 ~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
                      +++.+++....   +| .+.+-+|-
T Consensus       191 ~~~~~~~~~~~---~g-~~~~~~~~  211 (281)
T d1vl0a_         191 RVVLKVIDEKN---YG-TFHCTCKG  211 (281)
T ss_dssp             HHHHHHHHHTC---CE-EEECCCBS
T ss_pred             hhhhhhhhhcc---cC-ceeEeCCC
Confidence            88888875432   45 45554443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.91  E-value=6e-14  Score=110.43  Aligned_cols=48  Identities=29%  Similarity=0.509  Sum_probs=43.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG   68 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~   68 (280)
                      ++.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++.....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            467889889999999999999999999999999999999998876543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=5.8e-09  Score=86.43  Aligned_cols=213  Identities=15%  Similarity=0.139  Sum_probs=118.6

Q ss_pred             EEEecCCChhHHHHHHHHHHhCC-eEEEEecChh--HHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH--H
Q 023555           22 VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVD--RLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW--E   96 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~   96 (280)
                      ||||||+|.||+++++.|+++|+ .|+.+++-..  +....    .+.         ..+|.. +.   +...+...  .
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~----~~~---------~~~~~~-~~---~~~~~~~~~~~   64 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL----VDL---------NIADYM-DK---EDFLIQIMAGE   64 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH----HTS---------CCSEEE-EH---HHHHHHHHTTC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc----ccc---------chhhhc-cc---hHHHHHHhhhh
Confidence            89999999999999999999997 5777763221  11111    110         112222 11   22333332  2


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCC--------
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRG--------  168 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~--------  168 (280)
                      .+..+++++|.|+.....    ...   .+...+.|+.+...+++++.    +.+  -++|+.||.......        
T Consensus        65 ~~~~~~~i~~~aa~~~~~----~~~---~~~~~~~~~~~~~~~l~~~~----~~~--i~~v~~ss~~~~~~~~~~~~~~~  131 (307)
T d1eq2a_          65 EFGDVEAIFHEGACSSTT----EWD---GKYMMDNNYQYSKELLHYCL----ERE--IPFLYASSAATYGGRTSDFIESR  131 (307)
T ss_dssp             CCSSCCEEEECCSCCCTT----CCC---HHHHHHHTHHHHHHHHHHHH----HHT--CCEEEEEEGGGGTTCCSCBCSSG
T ss_pred             cccchhhhhhhccccccc----ccc---cccccccccccccccccccc----ccc--ccccccccccccccccccccccc
Confidence            345788999998754221    122   24456777888877776652    222  245555554433211        


Q ss_pred             -CCCCCCCChhhHHHHHHHHHHHHHHhCCCCeEEEEeecCcccCccccCcc-----chhhhhhhhhcC---------CCC
Q 023555          169 -QLPGGVAYASSKAGLNAMTKCLSLELGVHKIRVNSICPGLFKSEITEGLM-----KKDWLNNVASRT---------YPL  233 (280)
Q Consensus       169 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~---------~p~  233 (280)
                       ..+....|+.+|.+.+.+++.++.++   ++.+..+.|..+..+......     ............         ...
T Consensus       132 ~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  208 (307)
T d1eq2a_         132 EYEKPLNVYGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK  208 (307)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C
T ss_pred             cccccccccccccchhhhhcccccccc---ccccccccceeEeeccccccccccccccccccccccccceeeecCcccee
Confidence             11345689999999999999988775   677777777766554321110     001111111111         112


Q ss_pred             CCCCCChHHHHHHHHHhhcCCCCcccccEEEeCCcccCC
Q 023555          234 RDFGTTDPALTSLVRYLVHDSSEYVSGNIFIVDSGATLP  272 (280)
Q Consensus       234 ~~~~~~~~~va~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
                      +.+...+ |++.++..+.....    ...+.+.+|...+
T Consensus       209 r~~~~v~-d~~~~~~~~~~~~~----~~~~~~~~~~~~s  242 (307)
T d1eq2a_         209 RDFVYVG-DVADVNLWFLENGV----SGIFNLGTGRAES  242 (307)
T ss_dssp             BCEEEHH-HHHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             eeeeecc-cHHHHHHHHhhhcc----ccccccccccchh
Confidence            2344455 77887776665332    2367777665543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.15  E-value=1.5e-05  Score=59.30  Aligned_cols=75  Identities=23%  Similarity=0.424  Sum_probs=57.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++++|++||.|+ |++|+.+++.|...|+ ++.++.|+.++++++.+++..      .  .  .++    +++.+.+. 
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~------~--~--~~~----~~~~~~l~-   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG------E--A--VRF----DELVDHLA-   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC------E--E--CCG----GGHHHHHH-
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc------c--c--ccc----hhHHHHhc-
Confidence            3789999999998 9999999999999998 589999999998888777631      1  1  122    22333333 


Q ss_pred             HHHHcCCccEEEECCCCC
Q 023555           94 AWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~  111 (280)
                            ..|++|++.+..
T Consensus        84 ------~~Divi~atss~   95 (159)
T d1gpja2          84 ------RSDVVVSATAAP   95 (159)
T ss_dssp             ------TCSEEEECCSSS
T ss_pred             ------cCCEEEEecCCC
Confidence                  789999999753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=1.5e-05  Score=60.83  Aligned_cols=82  Identities=20%  Similarity=0.298  Sum_probs=59.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHH---HHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL---CDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++++|+|+|.|+ ||.|++++..|.+.|. +++++.|+.++.++.   .+++....    .......|+. +.+.+....
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~-~~~~~~~~~   88 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT----DCVVTVTDLA-DQQAFAEAL   88 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS----SCEEEEEETT-CHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc----CcceEeeecc-cccchhhhh
Confidence            689999999999 7999999999999999 588999987655544   44444432    2344566776 444444333


Q ss_pred             HHHHHHcCCccEEEECCCC
Q 023555           92 QKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~  110 (280)
                      .       ..|++||+...
T Consensus        89 ~-------~~diiIN~Tp~  100 (182)
T d1vi2a1          89 A-------SADILTNGTKV  100 (182)
T ss_dssp             H-------TCSEEEECSST
T ss_pred             c-------ccceeccccCC
Confidence            3       78999999864

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.07  E-value=4.3e-05  Score=55.89  Aligned_cols=116  Identities=16%  Similarity=0.225  Sum_probs=71.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +++++.|.|+ |.+|.++|..|+.+|.  +++++|++++.++....++...............|..              
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------------
Confidence            4668888895 9999999999999984  7999999998777666666543221122233333321              


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           96 EAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        96 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                       .....|++|..+|....  +  ..+.   .+.+..|+    .+++...+.+.+....+.++++|
T Consensus        69 -~~~~adivvitag~~~~--~--g~~r---~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          69 -DCKDADLVVITAGAPQK--P--GESR---LDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             -GGTTCSEEEECCCC-----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -HhccccEEEEecccccC--C--CCCH---HHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence             12378999999986421  1  1222   22334443    45566777777766566666654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.97  E-value=1.5e-05  Score=60.12  Aligned_cols=45  Identities=22%  Similarity=0.324  Sum_probs=40.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      ..|+|+|.|+ |.+|+.+|+.|+++|++|++++|+.++++++.+++
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~   45 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV   45 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc
Confidence            3689999987 99999999999999999999999999988876543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.95  E-value=0.00024  Score=51.92  Aligned_cols=120  Identities=15%  Similarity=0.103  Sum_probs=77.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCC-CcceEEEEeccCCCHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGS-SVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      .+-.++++.|.|+ |.+|.++|..++..|.  +++++|++++.++....++...... ...+.....|..          
T Consensus         2 ~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~----------   70 (148)
T d1ldna1           2 KNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD----------   70 (148)
T ss_dssp             TTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG----------
T ss_pred             CCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH----------
Confidence            3556788999996 9999999999999986  6999999998877777777654321 112222232221          


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                           .....|++|..+|.....   . .+..+   .+..|    ..+++.+.+.+.+..+.+.++++|.
T Consensus        71 -----~l~daDvvvitag~~~~~---~-~~R~d---l~~~N----~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          71 -----DCRDADLVVICAGANQKP---G-ETRLD---LVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             -----GTTTCSEEEECCSCCCCT---T-TCSGG---GHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             -----HhccceeEEEeccccccc---C-cchhH---HHHHH----HHHHHHHHHHHHhhCCCceEEEecC
Confidence                 234689999999875321   1 22221   22333    4455666777777666677777653

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=2.5e-05  Score=58.80  Aligned_cols=49  Identities=22%  Similarity=0.353  Sum_probs=44.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   65 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   65 (280)
                      +++||+|||.|+ ||.+++++..|.+.|.+|.++.|+.++++++.+.+.+
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            688999999998 8999999999999999999999999999988887754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.91  E-value=1.2e-05  Score=61.27  Aligned_cols=79  Identities=24%  Similarity=0.377  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|.++||+||+|++|.+.++.....|++|+.+.+++++.+.+.+ +    +  ....+   |-. +.+..+...+..  .
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~----G--a~~vi---~~~-~~~~~~~~~~~~--~   95 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-I----G--FDAAF---NYK-TVNSLEEALKKA--S   95 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T----T--CSEEE---ETT-SCSCHHHHHHHH--C
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-h----h--hhhhc---ccc-cccHHHHHHHHh--h
Confidence            58999999999999999999999999999999999877554332 1    2  12222   222 212223333222  2


Q ss_pred             cCCccEEEECCC
Q 023555           98 FGRIDALVNNAG  109 (280)
Q Consensus        98 ~g~id~li~~ag  109 (280)
                      ...+|+++.+.|
T Consensus        96 ~~Gvd~v~D~vG  107 (182)
T d1v3va2          96 PDGYDCYFDNVG  107 (182)
T ss_dssp             TTCEEEEEESSC
T ss_pred             cCCCceeEEecC
Confidence            247999999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=2.3e-05  Score=59.20  Aligned_cols=77  Identities=21%  Similarity=0.249  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|.+|||+||+|++|...++.....|++|+.+++++++.+.+ +++    +.  .-   ..|.+ +.+    +.+++.+.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~----Ga--~~---vi~~~-~~~----~~~~i~~~   92 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN----GA--HE---VFNHR-EVN----YIDKIKKY   92 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC--SE---EEETT-STT----HHHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-ccc----Cc--cc---ccccc-ccc----HHHHhhhh
Confidence            688999999999999999999989999999999988766543 222    21  11   12444 322    22333322


Q ss_pred             --cCCccEEEECCC
Q 023555           98 --FGRIDALVNNAG  109 (280)
Q Consensus        98 --~g~id~li~~ag  109 (280)
                        ...+|+++.++|
T Consensus        93 t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          93 VGEKGIDIIIEMLA  106 (174)
T ss_dssp             HCTTCEEEEEESCH
T ss_pred             hccCCceEEeeccc
Confidence              236899998875

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.77  E-value=0.00068  Score=49.97  Aligned_cols=122  Identities=15%  Similarity=0.174  Sum_probs=80.1

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      +...++++++.|.|+ |.+|.++|..++.+|.  +++++|++++.++.....++.... ..........|..        
T Consensus        14 ~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~--------   84 (160)
T d1i0za1          14 EEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS--------   84 (160)
T ss_dssp             SCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG--------
T ss_pred             ccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh--------
Confidence            344567788999996 9999999999999988  699999998887766666654221 1112222222222        


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                             ....-|++|..||....  +  ..+..+   .++.    ...+++.+.+.+.+...++-+|++|.
T Consensus        85 -------~~~~adiVVitAg~~~~--~--g~tR~~---l~~~----N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          85 -------VTANSKIVVVTAGVRQQ--E--GESRLN---LVQR----NVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             -------GGTTCSEEEECCSCCCC--T--TCCGGG---GHHH----HHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             -------hcccccEEEEecCCccc--c--CcchHH---HHHH----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence                   12478999999997522  1  233322   2333    44567777888877776677777754

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.76  E-value=0.00097  Score=48.09  Aligned_cols=114  Identities=16%  Similarity=0.143  Sum_probs=71.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecC--hhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARR--VDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++.|+|++|.+|.++|..+..+|.  ++++.+.+  ++.++....++...............|..               
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~---------------   66 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE---------------   66 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG---------------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH---------------
Confidence            578999999999999999999987  58898854  34444444455442222223332223221               


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      ....-|++|..||...  . + ..+..+   .++.|    ..+++.+.+.+.+...++.++.+|
T Consensus        67 ~~~~aDiVvitaG~~~--~-~-g~~R~d---l~~~N----~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          67 DTAGSDVVVITAGIPR--Q-P-GQTRID---LAGDN----APIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             GGTTCSEEEECCCCCC--C-T-TCCHHH---HHHHH----HHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             HhhhcCEEEEeccccc--c-c-CCchhh---HHHHH----HHHHHHHHHHHHhcCCCceEEEec
Confidence            1237899999999642  2 2 234433   34444    456677778888776666666664

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2.7e-05  Score=50.18  Aligned_cols=43  Identities=33%  Similarity=0.417  Sum_probs=38.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -++.++||+||+||+|....+.+...|++|+.+++++++.+-+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3588999999999999999998888899999999998877654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.75  E-value=0.0012  Score=49.33  Aligned_cols=117  Identities=12%  Similarity=0.138  Sum_probs=68.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHh---CC----eEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKA---GC----RIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~---G~----~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   89 (280)
                      ..+|.||||+|.||++++..|+..   |.    .+.+.+...  ..++...-+++..............    +.   . 
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~----~~---~-   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI----DP---Y-   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES----CH---H-
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccc----cc---h-
Confidence            347999999999999999999874   32    345556544  3456555566554322222222221    21   1 


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEe
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINIS  160 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vs  160 (280)
                            +.+...|++|..+|....    ...+.+++   ++.|    ..+++.+.+.+.+..+ ...|+.++
T Consensus        96 ------~~~~~aDvVvi~ag~~rk----pg~tR~Dl---l~~N----~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 ------EVFEDVDWALLIGAKPRG----PGMERAAL---LDIN----GQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ------HHTTTCSEEEECCCCCCC----TTCCHHHH---HHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ------hhccCCceEEEeeccCCC----CCCcHHHH---HHHH----HHHHHHHHHHHHhhCCCCcEEEEec
Confidence                  233489999999987522    24455553   3444    4555667777766432 34555553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.74  E-value=0.0001  Score=55.37  Aligned_cols=76  Identities=25%  Similarity=0.337  Sum_probs=58.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ++++|+++|.|+ ||.+++++..|.+.+.+|.++.|+.++++.+.+.+....    .+.....|..              
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~----~~~~~~~~~~--------------   75 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG----NIQAVSMDSI--------------   75 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS----CEEEEEGGGC--------------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc----ccchhhhccc--------------
Confidence            688999999987 888999999999988899999999999999988886432    3333333321              


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                       .....|++||++...
T Consensus        76 -~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -PLQTYDLVINATSAG   90 (171)
T ss_dssp             -CCSCCSEEEECCCC-
T ss_pred             -cccccceeeeccccc
Confidence             124789999998653

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=4.9e-05  Score=57.44  Aligned_cols=80  Identities=11%  Similarity=0.262  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|+++||+||+|++|...++.....|++|+.+++++++.+.+. ++    +.  ..   .+|.+ +.+-.++ +.++ ..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l----Ga--~~---vi~~~-~~d~~~~-v~~~-t~   94 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA----GA--WQ---VINYR-EEDLVER-LKEI-TG   94 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH----TC--SE---EEETT-TSCHHHH-HHHH-TT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc----CC--eE---EEECC-CCCHHHH-HHHH-hC
Confidence            4899999999999999999999999999999999998876543 33    21  11   23444 2222222 2222 12


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      ...+|+++.+.|.
T Consensus        95 g~g~d~v~d~~g~  107 (179)
T d1qora2          95 GKKVRVVYDSVGR  107 (179)
T ss_dssp             TCCEEEEEECSCG
T ss_pred             CCCeEEEEeCccH
Confidence            3468999998864

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.70  E-value=3.8e-05  Score=58.28  Aligned_cols=77  Identities=18%  Similarity=0.210  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|+++||+||+|++|...++.+...|++|+++++++++.+.+ +   + .+.  .. .  .|-. + +   .+.+++.+.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l-~---~-~Ga--~~-v--i~~~-~-~---~~~~~v~~~   89 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-S---R-LGV--EY-V--GDSR-S-V---DFADEILEL   89 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-H---T-TCC--SE-E--EETT-C-S---THHHHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc-c---c-ccc--cc-c--ccCC-c-c---CHHHHHHHH
Confidence            478999999999999999999999999999999988765433 2   2 221  21 1  2333 2 2   233344443


Q ss_pred             c--CCccEEEECCC
Q 023555           98 F--GRIDALVNNAG  109 (280)
Q Consensus        98 ~--g~id~li~~ag  109 (280)
                      .  .++|+++.++|
T Consensus        90 t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          90 TDGYGVDVVLNSLA  103 (183)
T ss_dssp             TTTCCEEEEEECCC
T ss_pred             hCCCCEEEEEeccc
Confidence            2  36999999887

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=0.00069  Score=49.90  Aligned_cols=122  Identities=13%  Similarity=0.180  Sum_probs=78.4

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCC-CcceEEEEeccCCCHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGS-SVRAMAVELDVSANGAAIEN   89 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   89 (280)
                      +...++..++.|.|+ |.+|.++|..++..|.  +++++|++++.++....+++..... .........|..        
T Consensus        13 ~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~--------   83 (159)
T d2ldxa1          13 PEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN--------   83 (159)
T ss_dssp             SCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG--------
T ss_pred             ccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh--------
Confidence            445567777888886 9999999999999977  6999999988887777777653321 112222222222        


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           90 SVQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        90 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                             .....|++|..+|.....    ..+..+   .++    ....+++.+.+.+.+....+.++++|.
T Consensus        84 -------~~~~adivvitag~~~~~----~~~R~d---ll~----~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 -------VSANSKLVIITAGARMVS----GQTRLD---LLQ----RNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             -------GGTTEEEEEECCSCCCCT----TTCSSC---TTH----HHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             -------hhccccEEEEecccccCC----CCCHHH---HHH----HHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence                   124789999999875322    122211   122    244556677777777666677777754

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.0011  Score=47.63  Aligned_cols=113  Identities=18%  Similarity=0.182  Sum_probs=72.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|.|+ |.+|.+++..++.+|.  +++++|.+++.++....++...............|..               ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~---------------~~   65 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA---------------DL   65 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG---------------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHH---------------Hh
Confidence            4667786 8999999999999875  6999999998877666666554322222333232221               12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      ...|++|..+|....   + ..+..+   .+..|    ..+++.+.+.+.+..+.+.++++|
T Consensus        66 ~~adivvitag~~~~---~-g~~r~d---l~~~N----~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          66 KGSDVVIVAAGVPQK---P-GETRLQ---LLGRN----ARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TTCSEEEECCCCCCC---S-SCCHHH---HHHHH----HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCCEEEEecccccC---C-Ccchhh---hhccc----cchHHHHHHHHHhcCCCcEEEEeC
Confidence            378999999987522   1 234433   33334    346677778887777666666654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.69  E-value=0.00039  Score=50.54  Aligned_cols=119  Identities=13%  Similarity=0.131  Sum_probs=73.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCC-CcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGS-SVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++.|+|+ |.+|.++|..++.+|.  ++++++.++++++....++...... .........|..               
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~---------------   65 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA---------------   65 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG---------------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH---------------
Confidence            67788895 9999999999999885  6999999998877766666654321 122222222221               


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ....-|++|..||.......-...+   -.+.++.|    ..+++.+.+.+.+....+.+|++|.
T Consensus        66 ~l~~adiVVitaG~~~~~~~~~g~~---R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          66 ALADADVVISTLGNIKLQQDNPTGD---RFAELKFT----SSMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             GGTTCSEEEECCSCGGGTC----------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             HhccccEEEEeccccccccccCCcc---HHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecC
Confidence            1237899999999753211110111   12223333    4566778888877766666666643

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.68  E-value=0.00017  Score=53.85  Aligned_cols=83  Identities=18%  Similarity=0.226  Sum_probs=56.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|.+++|+| +|++|..++..+...|++|+++++++++++.+.+ +    +  .... +..|..  .++.....+++.+
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~----g--a~~~-~~~~~~--~~~~~~~~~~~~~   93 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C----G--ADVT-LVVDPA--KEEESSIIERIRS   93 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T----T--CSEE-EECCTT--TSCHHHHHHHHHH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c----C--CcEE-Eecccc--ccccchhhhhhhc
Confidence            4578999997 6899999999999999999999999988765433 2    1  1222 222222  1233445555555


Q ss_pred             Hc-CCccEEEECCCC
Q 023555           97 AF-GRIDALVNNAGV  110 (280)
Q Consensus        97 ~~-g~id~li~~ag~  110 (280)
                      .. +.+|++|.++|.
T Consensus        94 ~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          94 AIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HSSSCCSEEEECSCC
T ss_pred             ccccCCceeeecCCC
Confidence            44 368999999974

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.67  E-value=9.3e-05  Score=56.50  Aligned_cols=87  Identities=13%  Similarity=0.169  Sum_probs=56.2

Q ss_pred             CCcEEEE-ecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH-
Q 023555           18 DNKVVMV-TGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW-   95 (280)
Q Consensus        18 ~~k~vlI-tG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-   95 (280)
                      .|.+++| +||+|++|.+.++..-..|++|+.+.|+.+..++..+.+.+....   . .+..|-. +.......+.++. 
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad---~-vi~~~~~-~~~~~~~~v~~~~~  102 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---Q-VITEDQN-NSREFGPTIKEWIK  102 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---E-EEEHHHH-HCGGGHHHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc---E-EEecccc-chhHHHHHHHHHHh
Confidence            3555555 699999999999988889999999998877777666666554321   1 1222111 1122333344443 


Q ss_pred             HHcCCccEEEECCC
Q 023555           96 EAFGRIDALVNNAG  109 (280)
Q Consensus        96 ~~~g~id~li~~ag  109 (280)
                      ...+++|+++.+.|
T Consensus       103 ~~g~~vdvv~D~vg  116 (189)
T d1gu7a2         103 QSGGEAKLALNCVG  116 (189)
T ss_dssp             HHTCCEEEEEESSC
T ss_pred             hccCCceEEEECCC
Confidence            34457999999876

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.66  E-value=0.00042  Score=50.91  Aligned_cols=125  Identities=9%  Similarity=0.068  Sum_probs=74.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .-+.+++.|.|+ |.+|..+|..++..|. ++++++.+++.++.....+..... ..........  . +.   +...  
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~-~~---~~~~--   74 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--Y-SY---EAAL--   74 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--C-SH---HHHH--
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--C-ch---hhhh--
Confidence            456778888897 9999999999999886 799999988777666666544211 1111111111  1 21   1222  


Q ss_pred             HHHHcCCccEEEECCCCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKS-PLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                           ..-|++|..+|.....+. ..+.+..+   .+..    ...+++.+.+.+.+....+.++++|.
T Consensus        75 -----~~adiVvitag~~~~~g~~~~~~tR~~---l~~~----n~~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 -----TGADCVIVTAGLTKVPGKPDSEWSRND---LLPF----NSKIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             -----TTCSEEEECCSCSSCTTCCGGGCCGGG---GHHH----HHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             -----cCCCeEEEecccccCCCCCCcccchhh---hhhh----hHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence                 278999999987532221 11223322   2333    33455666666776665667766654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.62  E-value=0.0024  Score=46.00  Aligned_cols=114  Identities=18%  Similarity=0.190  Sum_probs=71.1

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|.|+ |.+|.++|..++.+|.  ++++++++++.++.....++..............+   +.   +        ..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~---~~---~--------~~   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD---DP---E--------IC   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES---CG---G--------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC---CH---H--------Hh
Confidence            4667786 9999999999999987  69999999988766666665532211122222221   11   1        11


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      ..-|++|..+|...  .+  ..+..+   .+..|.    .+++.+.+.+.+....+.++++|
T Consensus        68 ~daDvVVitaG~~~--~~--g~~R~d---l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          68 RDADMVVITAGPRQ--KP--GQSRLE---LVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             TTCSEEEECCCCCC--CT--TCCHHH---HHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             hCCcEEEEeccccc--CC--CCchhh---hhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            36799999999742  11  344443   344444    55666667777766566666665

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.62  E-value=9.5e-05  Score=52.95  Aligned_cols=72  Identities=19%  Similarity=0.300  Sum_probs=53.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      .|+|.|+ |.+|+.+++.|.+.|+.|++++.+++..+.+.+++        ....+..|.+ +.+.++++      ....
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~--------~~~vi~Gd~~-~~~~l~~~------~i~~   65 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--------DALVINGDCT-KIKTLEDA------GIED   65 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------SSEEEESCTT-SHHHHHHT------TTTT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh--------hhhhccCccc-chhhhhhc------Chhh
Confidence            5889998 99999999999999999999999998877665432        3456889998 54433332      1236


Q ss_pred             ccEEEECC
Q 023555          101 IDALVNNA  108 (280)
Q Consensus       101 id~li~~a  108 (280)
                      .|.++...
T Consensus        66 a~~vv~~t   73 (132)
T d1lssa_          66 ADMYIAVT   73 (132)
T ss_dssp             CSEEEECC
T ss_pred             hhhhcccC
Confidence            77777654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.59  E-value=0.00031  Score=50.92  Aligned_cols=115  Identities=18%  Similarity=0.181  Sum_probs=67.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +++.|.|+ |.+|.++|..++.+|.  +++++|++++.++....++...............|.               +.
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~---------------~~   65 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY---------------SD   65 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG---------------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH---------------HH
Confidence            34566686 9999999999999877  699999998876666666654333222222211111               12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ....|++|..+|....   . ..+..   +.+..|.    .+++.+.+.+.+..+.+.++++|.
T Consensus        66 ~~~adivvitag~~~~---~-~~~r~---~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          66 VKDCDVIVVTAGANRK---P-GETRL---DLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             GTTCSEEEECCCC----------CHH---HHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             hCCCceEEEecccccC---c-Ccchh---HHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            3478999999986421   1 22332   3344444    555666677777665666666643

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.58  E-value=0.0024  Score=46.13  Aligned_cols=113  Identities=20%  Similarity=0.256  Sum_probs=67.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChh--HHHHHHHHHHhhc---CCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVD--RLKSLCDEINKQS---GSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~--~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++.|+||+|.+|.++|..++.+|.  +++++++++.  +++....++....   ....++.....+   +.         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~---d~---------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE---NL---------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT---CG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc---hH---------
Confidence            488999999999999999999985  7999998753  3444455555422   122222222211   11         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINI  159 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~v  159 (280)
                        +.....|++|..||....    ...+..+   .++.|.    .+++.+.+.+.+.. +..++.+
T Consensus        70 --~~l~~aDvVVitAG~~~~----~g~sR~d---l~~~Na----~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          70 --RIIDESDVVIITSGVPRK----EGMSRMD---LAKTNA----KIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             --GGGTTCSEEEECCSCCCC----TTCCHHH---HHHHHH----HHHHHHHHHHHHHC-CCEEEEC
T ss_pred             --HHhccceEEEEecccccC----CCCChhh---hhhhhH----HHHHHHHHHHhccC-CCeEEEE
Confidence              122378999999997421    1334443   344444    44556666665554 3445544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.58  E-value=0.0015  Score=47.70  Aligned_cols=115  Identities=12%  Similarity=0.143  Sum_probs=67.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC---------eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC---------RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~---------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +|.|+||+|.+|++++..|+..+.         +++..+++.+.++....++......  ....+...-  +.   .   
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~---~---   75 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LLAGLEATD--DP---K---   75 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TEEEEEEES--CH---H---
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccc--cccccccCC--ch---h---
Confidence            799999999999999999998653         2233345556666665555443222  222222211  11   1   


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEe
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINIS  160 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vs  160 (280)
                          +.+...|++|..+|....    ...+.+++.   ..    ...+++.+.+.+.+..+ .+.++.+|
T Consensus        76 ----~~~~~advViitaG~~~~----pg~~r~dl~---~~----N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          76 ----VAFKDADYALLVGAAPRK----AGMERRDLL---QV----NGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ----HHTTTCSEEEECCCCCCC----TTCCHHHHH---HH----HHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----hhcccccEEEeecCcCCC----CCCcHHHHH---HH----HHHHHHHHHHHHHHhCCCCcEEEEec
Confidence                223478999999997521    244555543   33    34555666666666432 34555554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.54  E-value=0.00015  Score=54.61  Aligned_cols=52  Identities=29%  Similarity=0.528  Sum_probs=45.0

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcC
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSG   68 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~   68 (280)
                      .+++||+|+|.|+ ||.+++++.+|.+.| +|.++.|+.++++++.+.+.....
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~   65 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN   65 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhc
Confidence            4689999999987 789999999998777 899999999999998888865543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.52  E-value=0.00043  Score=50.22  Aligned_cols=115  Identities=20%  Similarity=0.243  Sum_probs=68.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|+||+|.+|.++|..++.+|.  ++++++.++.+.+.  ..++.... ... ......-    .+..+.+       
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~-~~~-~~~~~~~----~~~~~~~-------   66 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIET-RAT-VKGYLGP----EQLPDCL-------   66 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSS-SCE-EEEEESG----GGHHHHH-------
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhh-hcC-CCeEEcC----CChHHHh-------
Confidence            588999999999999999999887  58999987654333  34432211 111 1111111    1122222       


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           99 GRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        99 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ...|++|..+|...  .+  ..+..+   .++.|..    +++.+.+.+.+.+..+.++++|.
T Consensus        67 ~~aDivVitag~~~--~~--g~sR~~---ll~~N~~----i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          67 KGCDVVVIPAGVPR--KP--GMTRDD---LFNTNAT----IVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             TTCSEEEECCSCCC--CT--TCCGGG---GHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCCEEEECCCcCC--CC--CCCcch---HHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence            37899999999742  11  223333   3444544    44666666666665677777754

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.51  E-value=0.00023  Score=53.06  Aligned_cols=45  Identities=22%  Similarity=0.354  Sum_probs=40.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~   63 (280)
                      ++|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6889999988 8999999999999998 6999999999888877655

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00042  Score=54.16  Aligned_cols=80  Identities=14%  Similarity=0.157  Sum_probs=55.1

Q ss_pred             cCCCCCcEEEEecC----------------CChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEE
Q 023555           14 WCQLDNKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVE   77 (280)
Q Consensus        14 ~~~l~~k~vlItG~----------------~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (280)
                      +++|+|++||||+|                ||..|.++|+++..+|++|.++.-....          .  ....+..+.
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~--~p~~~~~~~   68 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------P--TPPFVKRVD   68 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------C--CCTTEEEEE
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------C--cccccccce
Confidence            36899999999985                6889999999999999999887654311          0  111233333


Q ss_pred             eccCCCHHHHHHHHHHHHHHcCCccEEEECCCCC
Q 023555           78 LDVSANGAAIENSVQKAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        78 ~D~~~~~~~~~~~~~~~~~~~g~id~li~~ag~~  111 (280)
                      .  . .   .+++.+.+.+.+...|++|++|++.
T Consensus        69 ~--~-t---~~~m~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          69 V--M-T---ALEMEAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             C--C-S---HHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             e--h-h---hHHHHHHHHhhhccceeEeeeechh
Confidence            2  2 2   2344444445556789999999875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00064  Score=50.65  Aligned_cols=81  Identities=19%  Similarity=0.256  Sum_probs=54.5

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+ +++    +.  .. .+..+-. +   .....+.+.
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~----Ga--~~-~~~~~~~-~---~~~~~~~~~   91 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI----GA--DL-VLQISKE-S---PQEIARKVE   91 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT----TC--SE-EEECSSC-C---HHHHHHHHH
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh----CC--cc-ccccccc-c---ccccccccc
Confidence            35789999986 9999999999999999 699999999887754 333    11  11 1222212 2   333344443


Q ss_pred             HHc-CCccEEEECCCC
Q 023555           96 EAF-GRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~-g~id~li~~ag~  110 (280)
                      ..+ ..+|++|.++|.
T Consensus        92 ~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          92 GQLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHHTSCCSEEEECSCC
T ss_pred             ccCCCCceEEEeccCC
Confidence            333 379999999985

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00025  Score=53.58  Aligned_cols=81  Identities=22%  Similarity=0.310  Sum_probs=54.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..|.+|||+|+ |++|...+..+...|+ +|+++++++++++.+ +++    +.  .. .  .|.++  ++..+..+++.
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l----Ga--~~-v--i~~~~--~~~~~~~~~i~   93 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI----GA--DL-T--LNRRE--TSVEERRKAIM   93 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT----TC--SE-E--EETTT--SCHHHHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc----cc--eE-E--Eeccc--cchHHHHHHHH
Confidence            35899999987 8999999999999998 799999999887654 333    21  11 1  23321  22333344444


Q ss_pred             HHc--CCccEEEECCCC
Q 023555           96 EAF--GRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~--g~id~li~~ag~  110 (280)
                      +..  ..+|++|.++|.
T Consensus        94 ~~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          94 DITHGRGADFILEATGD  110 (182)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HhhCCCCceEEeecCCc
Confidence            432  258999999875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.0002  Score=54.45  Aligned_cols=79  Identities=19%  Similarity=0.304  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeE-EEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+++|||+||+||+|...++.....|+++ +.+++++++...+..++.    .  .   ...|.. + ++..+.++++..
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~g----a--d---~vi~~~-~-~~~~~~~~~~~~   98 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELG----F--D---AAVNYK-T-GNVAEQLREACP   98 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSC----C--S---EEEETT-S-SCHHHHHHHHCT
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhccc----c--e---EEeecc-c-hhHHHHHHHHhc
Confidence            34899999999999999999888889974 556777777666655441    1  1   122333 2 334444444432


Q ss_pred             HcCCccEEEECCC
Q 023555           97 AFGRIDALVNNAG  109 (280)
Q Consensus        97 ~~g~id~li~~ag  109 (280)
                        ..+|+++.+.|
T Consensus        99 --~GvDvv~D~vG  109 (187)
T d1vj1a2          99 --GGVDVYFDNVG  109 (187)
T ss_dssp             --TCEEEEEESSC
T ss_pred             --cCceEEEecCC
Confidence              36999999886

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.24  E-value=0.0062  Score=43.64  Aligned_cols=114  Identities=15%  Similarity=0.156  Sum_probs=67.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++.|+|+ |.+|.+++..++..|.  +++++|.+++.++.....+..... ..........+   +.           +.
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~---~~-----------~~   66 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN---DY-----------AD   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES---CG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC---CH-----------HH
Confidence            4677786 9999999999999984  799999998876655545433211 01112222221   21           11


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      +...|++|..+|.....    ..+..+   .++.|.    .+++.+.+.+.+..+.+.++++|
T Consensus        67 ~~dadvvvitag~~~~~----g~~r~~---l~~~N~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          67 TANSDIVIITAGLPRKP----GMTRED---LLMKNA----GIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             GTTCSEEEECCSCCCCT----TCCHHH---HHHHHH----HHHHHHHHHHHHHCSSCEEEECC
T ss_pred             hcCCeEEEEEEecCCCC----CCchHH---HHHHHH----HHHHHHHHHhhccCCCeEEEEec
Confidence            24789999999974221    223332   333343    34555666666656566666654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.23  E-value=0.00045  Score=51.43  Aligned_cols=81  Identities=16%  Similarity=0.207  Sum_probs=53.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.+.+++|+|++|++|..++..+...|. +|+.+++++++.+.+.+ +    +.  . ..+  |.+ +.+..++..+.. 
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~----Ga--~-~~i--~~~-~~~~~~~~~~~~-   93 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A----GA--D-YVI--NAS-MQDPLAEIRRIT-   93 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H----TC--S-EEE--ETT-TSCHHHHHHHHT-
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c----CC--c-eee--ccC-CcCHHHHHHHHh-
Confidence            4588999999999999999999999996 78899999877665432 2    21  1 122  233 222233332221 


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                       ..+.+|++|.++|.
T Consensus        94 -~~~~~d~vid~~g~  107 (170)
T d1jvba2          94 -ESKGVDAVIDLNNS  107 (170)
T ss_dssp             -TTSCEEEEEESCCC
T ss_pred             -hcccchhhhccccc
Confidence             12369999999874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.19  E-value=0.0002  Score=53.51  Aligned_cols=42  Identities=31%  Similarity=0.412  Sum_probs=37.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      ++.+|||+||+||+|...++.....|++|+.+.+++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            466899999999999999998888899999999998877664

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00023  Score=47.57  Aligned_cols=38  Identities=16%  Similarity=0.115  Sum_probs=34.5

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      +++||+++|.|. |..|+++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999998 77899999999999999999998653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.14  E-value=0.0052  Score=44.53  Aligned_cols=120  Identities=8%  Similarity=0.101  Sum_probs=71.6

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcC-CCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .++.|.|+ |.+|.++|..+..++. +++++|++++.++.....++.... ...+......+..              +.
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~--------------~~   68 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY--------------DD   68 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG--------------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc--------------cc
Confidence            46778885 9999999998888876 699999988877666666644311 1112222222211              12


Q ss_pred             cCCccEEEECCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSP-LDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ....|++|..+|.....+.. .+.+..+   .+..|    ..+++.+.+.+.+....+.++++|.
T Consensus        69 ~~~advvvitag~~~~~g~~~~~~~R~~---l~~~N----~~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          69 LAGADVVIVTAGFTKAPGKSDKEWNRDD---LLPLN----NKIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             GTTCSEEEECCSCSSCTTCCSTTCCGGG---GHHHH----HHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             cCCCcEEEEecccccCCCCCccccchhH---HHHHH----HHHHHHHHHHHHhcCCCeEEEEecC
Confidence            23789999999975322211 1122222   33344    3556677777777665666666653

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.14  E-value=0.0061  Score=43.73  Aligned_cols=114  Identities=14%  Similarity=0.149  Sum_probs=68.1

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcC-CCcceEEE-EeccCCCHHHHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAV-ELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~-~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++.|.|+ |.+|.++|..|+.++. ++++++.+++.++.....+..... ........ ..|..               
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~---------------   65 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA---------------   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG---------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH---------------
Confidence            46777786 9999999999999886 799999988776665555533211 00111111 12221               


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINIS  160 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vs  160 (280)
                      ....-|++|..||....   + ..+.   .+.+..|.    .+++...+.+.+..+.+.++++|
T Consensus        66 ~~~~advvvitag~~~~---~-~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          66 DTANSDVIVVTSGAPRK---P-GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             GGTTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             HhcCCCEEEEeeeccCC---c-Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            12368999999997521   1 1222   22334443    56778888888777666666654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.13  E-value=0.021  Score=40.79  Aligned_cols=114  Identities=13%  Similarity=0.131  Sum_probs=70.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHHhhcC-CCcceEEEE-eccCCCHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKQSG-SSVRAMAVE-LDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~-~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++.|.|+ |.+|.++|..++.+|.  +++++|.+++.++....++..... ......... .|..               
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~---------------   65 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS---------------   65 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG---------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH---------------
Confidence            4667786 9999999999999886  599999998887666556654321 111112222 2221               


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           97 AFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        97 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                      ....-|++|..+|....   . ..+..+   .+.    ....+++.+.+.+.+....+.++++|.
T Consensus        66 ~~~~adiVvitag~~~~---~-g~~r~~---l~~----~n~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          66 LLKGSEIIVVTAGLARK---P-GMTRLD---LAH----KNAGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             GGTTCSEEEECCCCCCC---S-SCCHHH---HHH----HHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             HhccccEEEEeccccCC---C-CCchHH---HHH----HhhHHHHHHHHHHHhhCCCcEEEEecC
Confidence            12368999999986422   1 234433   223    344556677777777665666666643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.11  E-value=0.00034  Score=52.70  Aligned_cols=42  Identities=33%  Similarity=0.445  Sum_probs=37.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      ++.++||+||+||+|...++.....|++|+.+++++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            455899999999999999998888999999999998886644

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.09  E-value=0.00035  Score=52.27  Aligned_cols=43  Identities=28%  Similarity=0.322  Sum_probs=38.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -+|+++||+||+|++|...++.+...|++|+.+++++++.+..
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~   68 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP   68 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc
Confidence            4789999999999999999998888999999999988776654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.0066  Score=43.69  Aligned_cols=115  Identities=15%  Similarity=0.212  Sum_probs=67.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHh-C--CeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKA-G--CRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~-G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++.|+|++|.+|.++|..|+.+ +  .++++.+..+ .++....++.... .......+ .. +++   .+ .+      
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~-~~~~~~~~-~~-~~~---~~-~~------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP-TAVKIKGF-SG-EDA---TP-AL------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSC-SSCEEEEE-CS-SCC---HH-HH------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCc-cccCCcEE-Ec-CCC---cc-cc------
Confidence            5789999999999999988654 3  5799999865 4444444554431 12222221 11 212   12 22      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEec
Q 023555           98 FGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISS  161 (280)
Q Consensus        98 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS  161 (280)
                       ..-|++|..+|...  ++  ..+..+   .+..|    ..+++...+.+.+..+++.+|++|.
T Consensus        68 -~~aDvvvitaG~~~--k~--g~~R~d---l~~~N----~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          68 -EGADVVLISAGVRR--KP--GMDRSD---LFNVN----AGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             -TTCSEEEECCSCCC--CT--TCCGGG---GHHHH----HHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             -CCCCEEEECCCccC--CC--Ccchhh---HHHHH----HHHHHHHHHHHHhhCCCcEEEEccC
Confidence             26799999999752  22  223333   34445    3455666666666665667776654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.07  E-value=0.00046  Score=51.73  Aligned_cols=78  Identities=17%  Similarity=0.135  Sum_probs=52.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -+|.+|+|.|+ |++|...++.+...|+ +|+.+++++++++.+. ++.    .   ..  .+|.. +.+..    +.+.
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lG----a---~~--~i~~~-~~~~~----~~v~   89 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYG----A---TD--ILNYK-NGHIE----DQVM   89 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHT----C---SE--EECGG-GSCHH----HHHH
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhC----c---cc--ccccc-chhHH----HHHH
Confidence            35889999976 8999999999999998 6999999988766543 331    1   11  22333 21222    2333


Q ss_pred             HHc--CCccEEEECCCC
Q 023555           96 EAF--GRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~--g~id~li~~ag~  110 (280)
                      +..  ..+|++|.++|.
T Consensus        90 ~~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          90 KLTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HHhhccCcceEEEccCC
Confidence            322  359999999985

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.07  E-value=0.00092  Score=49.98  Aligned_cols=81  Identities=17%  Similarity=0.273  Sum_probs=53.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -+|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++.+...+ +    +  ..-.   .|..+..+.+.+..+...
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~----G--a~~~---i~~~~~~~~~~~~~~~~~   95 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V----G--ATEC---VNPQDYKKPIQEVLTEMS   95 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T----T--CSEE---ECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h----C--CeeE---EecCCchhHHHHHHHHHh
Confidence            35889999999 7899999999999986 78999999988775432 2    1  1111   122112223344444332


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                        .+.+|++|-+.|.
T Consensus        96 --~~G~D~vid~~G~  108 (176)
T d2jhfa2          96 --NGGVDFSFEVIGR  108 (176)
T ss_dssp             --TSCBSEEEECSCC
T ss_pred             --cCCCCEEEecCCc
Confidence              2579999999885

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.06  E-value=0.0004  Score=49.52  Aligned_cols=73  Identities=14%  Similarity=0.244  Sum_probs=51.8

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |.++|.|. |.+|+.+++.|.+.|++|++++.+++..+.+.+.         ....+.+|.+ +.+.++++      ...
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~---------~~~~~~gd~~-~~~~l~~a------~i~   63 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY---------ATHAVIANAT-EENELLSL------GIR   63 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT---------CSEEEECCTT-CTTHHHHH------TGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh---------CCcceeeecc-cchhhhcc------CCc
Confidence            56778866 8999999999999999999999999887765321         2334568888 54444333      112


Q ss_pred             CccEEEECCC
Q 023555          100 RIDALVNNAG  109 (280)
Q Consensus       100 ~id~li~~ag  109 (280)
                      +.|.+|-..+
T Consensus        64 ~a~~vi~~~~   73 (134)
T d2hmva1          64 NFEYVIVAIG   73 (134)
T ss_dssp             GCSEEEECCC
T ss_pred             cccEEEEEcC
Confidence            5677776654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.03  E-value=0.0003  Score=52.90  Aligned_cols=43  Identities=30%  Similarity=0.375  Sum_probs=38.3

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -+|.+|||+||+||+|...++.....|++|+.+++++++.+.+
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~   72 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL   72 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH
Confidence            3488999999999999999998889999999999998876654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.03  E-value=0.0017  Score=47.16  Aligned_cols=83  Identities=13%  Similarity=0.082  Sum_probs=55.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +.+-|++.|.||.|.+|.++|+.|.++|++|.+.+|+.....+...+       .........+    ...+...+.++.
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~-------~~~~v~~~~~----~~~~~~v~~~~~   74 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA-------NADVVIVSVP----INLTLETIERLK   74 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT-------TCSEEEECSC----GGGHHHHHHHHG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh-------hccccccccc----hhhheeeeeccc
Confidence            45567999999999999999999999999999999987654432211       1233333333    344566666665


Q ss_pred             HHcCCccEEEECCC
Q 023555           96 EAFGRIDALVNNAG  109 (280)
Q Consensus        96 ~~~g~id~li~~ag  109 (280)
                      ....+=.+++..++
T Consensus        75 ~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          75 PYLTENMLLADLTS   88 (152)
T ss_dssp             GGCCTTSEEEECCS
T ss_pred             ccccCCceEEEecc
Confidence            55444345555554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.01  E-value=0.0024  Score=47.69  Aligned_cols=81  Identities=14%  Similarity=0.212  Sum_probs=53.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+|+|+|+ ||+|...+..+...|+ +|+.+++++++++... ++.    .  ...+   |..+.....+...+.. 
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~G----A--~~~i---n~~~~~~~~~~~~~~~-   95 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVG----A--TECI---SPKDSTKPISEVLSEM-   95 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHT----C--SEEE---CGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcC----C--cEEE---CccccchHHHHHHHHh-
Confidence            45889999986 8999999999999996 7999999999888543 331    1  2211   2221111122232222 


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                       ..+.+|++|.+.|.
T Consensus        96 -~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 -TGNNVGYTFEVIGH  109 (176)
T ss_dssp             -HTSCCCEEEECSCC
T ss_pred             -ccccceEEEEeCCc
Confidence             23479999999875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.94  E-value=0.0021  Score=47.86  Aligned_cols=79  Identities=15%  Similarity=0.223  Sum_probs=51.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeE-EEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+++|.|+ |++|..++..+...|+++ +++++++++++.+ +++    +.   ..++  |.. + ++..+.+.++.
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~----Ga---~~~i--~~~-~-~~~~~~i~~~t   93 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL----GA---THVI--NSK-T-QDPVAAIKEIT   93 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH----TC---SEEE--ETT-T-SCHHHHHHHHT
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc----CC---eEEE--eCC-C-cCHHHHHHHHc
Confidence            45889999987 899999999988899975 5667777766654 333    11   1122  333 2 22333333321


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                        .+++|++|.++|.
T Consensus        94 --~gg~D~vid~~G~  106 (174)
T d1f8fa2          94 --DGGVNFALESTGS  106 (174)
T ss_dssp             --TSCEEEEEECSCC
T ss_pred             --CCCCcEEEEcCCc
Confidence              2479999999985

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.82  E-value=0.0016  Score=48.56  Aligned_cols=82  Identities=22%  Similarity=0.311  Sum_probs=54.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      --.|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++... ++    +.  .- .  .|.++....+++.....
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l----Ga--~~-~--i~~~~~d~~~~~~~~~~   93 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL----GA--TE-C--LNPKDYDKPIYEVICEK   93 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT----TC--SE-E--ECGGGCSSCHHHHHHHH
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc----CC--cE-E--EcCCCchhHHHHHHHHh
Confidence            346889999986 8999999999999998 6889999998887653 22    21  11 1  23221111233333322


Q ss_pred             HHHcCCccEEEECCCC
Q 023555           95 WEAFGRIDALVNNAGV  110 (280)
Q Consensus        95 ~~~~g~id~li~~ag~  110 (280)
                        ..+.+|++|-++|.
T Consensus        94 --~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 --TNGGVDYAVECAGR  107 (174)
T ss_dssp             --TTSCBSEEEECSCC
T ss_pred             --cCCCCcEEEEcCCC
Confidence              23479999999875

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0014  Score=49.80  Aligned_cols=45  Identities=24%  Similarity=0.245  Sum_probs=39.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHh
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   65 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   65 (280)
                      |+|.|.|+ |-+|..+|..|+.+|++|++.+++++.++...+.+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            78899998 7899999999999999999999999887776666543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.81  E-value=0.0021  Score=47.78  Aligned_cols=81  Identities=17%  Similarity=0.232  Sum_probs=52.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+|+|.|+ +|+|...+..+...|+. |+.+++++++++. .+++..      .- .+  |..+..+.+.+.+....
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~lGa------~~-~i--~~~~~~~~~~~~~~~~~   95 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEFGA------TE-CI--NPQDFSKPIQEVLIEMT   95 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHHTC------SE-EE--CGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHhCC------cE-EE--eCCchhhHHHHHHHHHc
Confidence            35889999988 59999999999999975 6777777777654 444421      11 12  22212233444444332


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                        .+.+|++|.++|.
T Consensus        96 --~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 --DGGVDYSFECIGN  108 (176)
T ss_dssp             --TSCBSEEEECSCC
T ss_pred             --CCCCcEeeecCCC
Confidence              3479999999874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.78  E-value=0.0029  Score=47.17  Aligned_cols=81  Identities=16%  Similarity=0.247  Sum_probs=53.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+|+|.|+ |+||...+..+...|+ +|+++++++++++.. +++    +.  . ..+...-.  ++..+...+.. 
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~----Ga--~-~~i~~~~~--~~~~~~~~~~~-   94 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL----GA--T-DCLNPREL--DKPVQDVITEL-   94 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT----TC--S-EEECGGGC--SSCHHHHHHHH-
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh----CC--C-cccCCccc--hhhhhhhHhhh-
Confidence            45789999975 9999999999999999 578889988876543 333    21  1 11221111  12233344333 


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                       ..+.+|++|-++|.
T Consensus        95 -~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 -TAGGVDYSLDCAGT  108 (174)
T ss_dssp             -HTSCBSEEEESSCC
T ss_pred             -hcCCCcEEEEeccc
Confidence             23589999999985

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.72  E-value=0.0014  Score=48.53  Aligned_cols=42  Identities=19%  Similarity=0.166  Sum_probs=36.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -.|.+++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            45899999986 8999999988888999999999998887754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.69  E-value=0.0068  Score=44.43  Aligned_cols=84  Identities=12%  Similarity=0.167  Sum_probs=54.0

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH--HhhcC-----CCcceEEEEeccCCCHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NKQSG-----SSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ++.|.|. |-+|.++|+.|.+.|++|+..+|+++..+.+.+.-  +....     ....+.++..    ....+++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav----p~~~~~~vl~~   76 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT----PIQLILPTLEK   76 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS----CHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC----cHhhhhhhhhh
Confidence            3566655 99999999999999999999999988777654421  00000     1122333222    34667888888


Q ss_pred             HHHHcCCccEEEECCC
Q 023555           94 AWEAFGRIDALVNNAG  109 (280)
Q Consensus        94 ~~~~~g~id~li~~ag  109 (280)
                      +.....+=.++++.++
T Consensus        77 l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          77 LIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HGGGSCTTCEEEECCS
T ss_pred             hhhhcccccceeeccc
Confidence            7666555555655543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.67  E-value=0.0014  Score=45.15  Aligned_cols=41  Identities=22%  Similarity=0.372  Sum_probs=35.9

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      =+.+++||++||.|+ |.+|..-++.|.+.|++|++++....
T Consensus         6 i~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           6 IFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             eEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            345999999999999 67999999999999999998887643

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.60  E-value=0.0076  Score=44.77  Aligned_cols=86  Identities=16%  Similarity=0.272  Sum_probs=59.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH---------------HhhcCCCcceEEEEeccCCCH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI---------------NKQSGSSVRAMAVELDVSANG   84 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~D~~~~~   84 (280)
                      ++|-|.|- |-+|.++|+.|+++|++|++.+|++++.+++.++-               .+...   ....+...+. +.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~---~~~~ii~~~~-~~   77 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLK---KPRRIILLVK-AG   77 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBC---SSCEEEECSC-TT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhc---ccceEEEecC-ch
Confidence            56777777 89999999999999999999999999888765431               11110   1222333344 44


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCC
Q 023555           85 AAIENSVQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        85 ~~~~~~~~~~~~~~g~id~li~~ag~  110 (280)
                      +.+....+.+.....+-+++|.....
T Consensus        78 ~~v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          78 QAVDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHHHhccccCcEEEecCcc
Confidence            67777777777766666777777543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.58  E-value=0.021  Score=41.26  Aligned_cols=115  Identities=15%  Similarity=0.153  Sum_probs=62.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-------eEEEEecCh--hHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRV--DRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      +|.|+||+|.+|++++..|+..+.       .+++.+.++  ..++....++......  ....+..  +.+.   .+  
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~--~~~~~~~--~~~~---~~--   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP--LLKDVIA--TDKE---EI--   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT--TEEEEEE--ESCH---HH--
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccc--ccccccc--Cccc---cc--
Confidence            799999999999999999986543       256666543  3444444444332222  2221221  1121   12  


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEe
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQ-EGSVINIS  160 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~vv~vs  160 (280)
                           .+...|++|..+|.....    ..+.++   .++.    ...+++.+.+.+.+..+ .+.++.+|
T Consensus        76 -----~~~~~dvVVitag~~~~~----g~sr~d---ll~~----N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          76 -----AFKDLDVAILVGSMPRRD----GMERKD---LLKA----NVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             -----HTTTCSEEEECCSCCCCT----TCCTTT---THHH----HHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -----ccCCceEEEEecccCCCC----CCchhH---HHHH----hHHHHHHHHHHHHhhCCCceEEEEec
Confidence                 223789999999975322    222222   2233    34556666666655432 34455554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.52  E-value=0.0029  Score=46.59  Aligned_cols=42  Identities=19%  Similarity=0.201  Sum_probs=36.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -.|.+++|.|+ |++|...+..+...|++|+.+++++++++..
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            45889999886 9999999998888999999999998887654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.49  E-value=0.0029  Score=47.19  Aligned_cols=42  Identities=29%  Similarity=0.339  Sum_probs=37.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      .|++.|.|+ |.+|.++|..|+++|++|.+++|+++..+.+.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            488999998 999999999999999999999999888776544

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.46  E-value=0.0048  Score=45.67  Aligned_cols=79  Identities=15%  Similarity=0.214  Sum_probs=50.9

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+++|.|+ |++|...+..+...|+ .|+.+++++++++.+.+ +    +.  . ..  .|.++  +..+...+.. 
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~----ga--~-~~--i~~~~--~~~~~~~~~~-   96 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L----GA--D-HV--VDARR--DPVKQVMELT-   96 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T----TC--S-EE--EETTS--CHHHHHHHHT-
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c----cc--c-ee--ecCcc--cHHHHHHHhh-
Confidence            35889999886 9999999998888887 56778888877665432 2    11  1 12  23332  2334333321 


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                       ....+|++|.++|.
T Consensus        97 -~~~g~d~vid~~g~  110 (172)
T d1h2ba2          97 -RGRGVNVAMDFVGS  110 (172)
T ss_dssp             -TTCCEEEEEESSCC
T ss_pred             -CCCCceEEEEecCc
Confidence             12369999999985

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.39  E-value=0.0024  Score=48.22  Aligned_cols=44  Identities=20%  Similarity=0.181  Sum_probs=38.0

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   64 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~   64 (280)
                      |+|.|.|+ |-+|..+|..|+.+|++|++.+++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56888888 889999999999999999999999988776666554

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.37  E-value=0.012  Score=42.98  Aligned_cols=42  Identities=21%  Similarity=0.223  Sum_probs=36.1

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      -.|.+++|.|+ |++|...+..+...|++|+.+++++++++..
T Consensus        26 ~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          26 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            35889999865 9999999999999999999999999887654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.01  Score=42.83  Aligned_cols=76  Identities=17%  Similarity=0.155  Sum_probs=54.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGR  100 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~  100 (280)
                      .++|.|. +.+|+.+++.|.+.|.+|++++.+++......++...     ..+.++..|.+ +.+.+    +++  ...+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-----~~~~vi~Gd~~-d~~~L----~~a--~i~~   71 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSN-DSSVL----KKA--GIDR   71 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTT-SHHHH----HHH--TTTT
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-----CCcEEEEccCc-chHHH----HHh--cccc
Confidence            4677777 7999999999999999999999988776655555432     14677899998 54333    322  1236


Q ss_pred             ccEEEECCC
Q 023555          101 IDALVNNAG  109 (280)
Q Consensus       101 id~li~~ag  109 (280)
                      .+.+|...+
T Consensus        72 a~~vi~~~~   80 (153)
T d1id1a_          72 CRAILALSD   80 (153)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEEccc
Confidence            788877753

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.34  E-value=0.04  Score=40.22  Aligned_cols=78  Identities=26%  Similarity=0.287  Sum_probs=57.4

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+.-+++|.|+ |-.|++-++.....|++|.++|.+.+.++++......      .+....   + +.+.+++.+.    
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~------~~~~~~---~-~~~~l~~~~~----   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS------RVELLY---S-NSAEIETAVA----   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GSEEEE---C-CHHHHHHHHH----
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc------cceeeh---h-hhhhHHHhhc----
Confidence            45678999988 7889999999999999999999999988877655432      222222   2 4445554444    


Q ss_pred             HcCCccEEEECCCCCC
Q 023555           97 AFGRIDALVNNAGVSG  112 (280)
Q Consensus        97 ~~g~id~li~~ag~~~  112 (280)
                         ..|++|..+-+.+
T Consensus        95 ---~aDivI~aalipG  107 (168)
T d1pjca1          95 ---EADLLIGAVLVPG  107 (168)
T ss_dssp             ---TCSEEEECCCCTT
T ss_pred             ---cCcEEEEeeecCC
Confidence               6799999997653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.33  E-value=0.0022  Score=50.00  Aligned_cols=48  Identities=19%  Similarity=0.341  Sum_probs=41.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      .+|+||+++|-|- |.+|+.+|+.|.+.|++|+.++.+....+....+.
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            4799999999986 89999999999999999999999988777666543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.33  E-value=0.0036  Score=47.08  Aligned_cols=41  Identities=24%  Similarity=0.233  Sum_probs=35.8

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      ...+.+|++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            34789999999995 899999999999999999999987544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.31  E-value=0.0048  Score=47.02  Aligned_cols=44  Identities=25%  Similarity=0.390  Sum_probs=38.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      .+++||+++|-| .|.+|+.+|+.|.+.|++|++++.+.+.....
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            479999999997 58899999999999999999999988776654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.28  E-value=0.03  Score=40.93  Aligned_cols=88  Identities=15%  Similarity=0.157  Sum_probs=55.7

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCC--eEEEEecChhHHHHHHHHHH--hhcCC----C-cceEEEEeccCCCHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN--KQSGS----S-VRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~--~~~~~----~-~~~~~~~~D~~~~~~~~~~~   90 (280)
                      |+++|.|. |-+|.++|+.|.+.|+  +|+.++++++.++.+.+.-.  .....    . .....+.+-+  ..+.+.+.
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~--p~~~~~~v   78 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS--PVRTFREI   78 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS--CHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccC--Cchhhhhh
Confidence            46888875 9999999999999997  58889999887776554310  00000    0 0112222222  45677888


Q ss_pred             HHHHHHHcCCccEEEECCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~  110 (280)
                      ++++......-.+++..++.
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            88887776555566665544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.26  E-value=0.01  Score=44.95  Aligned_cols=80  Identities=15%  Similarity=0.145  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+. ++    +    ...+ .|-. + ++..+.+.++ .
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~----G----a~~~-~~~~-~-~~~~~~i~~~-t   90 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ----G----FEIA-DLSL-D-TPLHEQIAAL-L   90 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----T----CEEE-ETTS-S-SCHHHHHHHH-H
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hc----c----ccEE-EeCC-C-cCHHHHHHHH-h
Confidence            5889999986 8999888888877888 6889999988776543 22    1    1111 2222 2 2233333332 1


Q ss_pred             HcCCccEEEECCCCC
Q 023555           97 AFGRIDALVNNAGVS  111 (280)
Q Consensus        97 ~~g~id~li~~ag~~  111 (280)
                      ....+|++|.+.|..
T Consensus        91 ~g~g~D~vid~vG~~  105 (195)
T d1kola2          91 GEPEVDCAVDAVGFE  105 (195)
T ss_dssp             SSSCEEEEEECCCTT
T ss_pred             CCCCcEEEEECcccc
Confidence            234699999999853

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.16  E-value=0.0078  Score=45.78  Aligned_cols=38  Identities=18%  Similarity=0.205  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+..++..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            4789999999997 8999999999999999999999853

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.0063  Score=44.79  Aligned_cols=75  Identities=17%  Similarity=0.195  Sum_probs=51.7

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -.|.+|+|.|+ |++|...++.+...|++++++++++++.+. .+++.    .  ..   ..|.. +.+..       ..
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lG----a--d~---~i~~~-~~~~~-------~~   89 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALG----A--DE---VVNSR-NADEM-------AA   89 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHT----C--SE---EEETT-CHHHH-------HT
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccC----C--cE---EEECc-hhhHH-------HH
Confidence            45899999986 899999998888899999999998887653 34442    1  11   13443 22211       12


Q ss_pred             HcCCccEEEECCCC
Q 023555           97 AFGRIDALVNNAGV  110 (280)
Q Consensus        97 ~~g~id~li~~ag~  110 (280)
                      ..+++|++|.++|.
T Consensus        90 ~~~~~D~vid~~g~  103 (168)
T d1uufa2          90 HLKSFDFILNTVAA  103 (168)
T ss_dssp             TTTCEEEEEECCSS
T ss_pred             hcCCCceeeeeeec
Confidence            22479999999885

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.99  E-value=0.0031  Score=45.72  Aligned_cols=36  Identities=22%  Similarity=0.482  Sum_probs=33.0

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      +++||++||.|| |.+|..-++.|++.|++|.+++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            799999999999 669999999999999999988654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.94  E-value=0.0094  Score=45.20  Aligned_cols=39  Identities=18%  Similarity=0.304  Sum_probs=34.8

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      ..+.||++.|.|- |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            3689999999997 89999999999999999999987643

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.94  E-value=0.012  Score=44.39  Aligned_cols=39  Identities=10%  Similarity=0.201  Sum_probs=35.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ...+.||++.|.|. |.||+.+|+.+...|++|+..++..
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            45799999999976 8999999999999999999998853

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.93  E-value=0.01  Score=43.81  Aligned_cols=81  Identities=20%  Similarity=0.247  Sum_probs=50.8

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      -.|.+++|.|+ +++|...+..+...|. +|+.+++++++++... ++    +.   ...+  |..++.+..++......
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~----GA---d~~i--n~~~~~~~~~~~~~~~~   95 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF----GA---TDFV--NPNDHSEPISQVLSKMT   95 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TC---CEEE--CGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc----CC---cEEE--cCCCcchhHHHHHHhhc
Confidence            45889999986 7788888888888877 5888999988876543 22    21   1122  22211112233333222


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                        .+.+|+++-++|.
T Consensus        96 --~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 --NGGVDFSLECVGN  108 (175)
T ss_dssp             --TSCBSEEEECSCC
T ss_pred             --cCCcceeeeecCC
Confidence              2479999999985

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.021  Score=44.64  Aligned_cols=36  Identities=28%  Similarity=0.351  Sum_probs=32.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEec
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAAR   51 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r   51 (280)
                      .+|++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus        26 ~kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          26 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            4688999999996 8999999999999999 5888886

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.84  E-value=0.009  Score=45.09  Aligned_cols=41  Identities=17%  Similarity=0.117  Sum_probs=35.8

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      ...+.||++.|.|. |.||+.+|+.+...|.+|+..++....
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            34789999999987 899999999999999999999886543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.72  E-value=0.1  Score=38.03  Aligned_cols=121  Identities=10%  Similarity=0.081  Sum_probs=65.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHh-----CCeEEEEecChhHHHHHHHHHHh---hcCCCcceEEEEeccCCCHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKA-----GCRIVAAARRVDRLKSLCDEINK---QSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~-----G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      .-++.|.||++.....+...++..     +.+++|+|.++++++.....++.   ..+...++. ...    +   .++.
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----d---~~ea   74 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFA-ATT----D---PEEA   74 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEE-EES----C---HHHH
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceE-ecC----C---hhhc
Confidence            345777787654333333344332     24799999999887644444332   222222221 122    1   1222


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhh----------------hHHHHHHHHHHHHHHhcCCCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNL----------------TGSWLVSKYVCIRMRDANQEG  154 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~~~~~~~~g  154 (280)
                      +       ..-|++|+.+|....       ...+-++.+..|+                ......++.+.+.+.+..+.+
T Consensus        75 l-------~~AD~Vvitag~~~~-------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A  140 (167)
T d1u8xx1          75 F-------TDVDFVMAHIRVGKY-------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDA  140 (167)
T ss_dssp             H-------SSCSEEEECCCTTHH-------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             c-------CCCCEEEECCCcCCC-------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCe
Confidence            2       378999999987421       1122233344442                234556778888888877667


Q ss_pred             eEEEEec
Q 023555          155 SVINISS  161 (280)
Q Consensus       155 ~vv~vsS  161 (280)
                      .++++|.
T Consensus       141 ~li~~TN  147 (167)
T d1u8xx1         141 WMLNYSN  147 (167)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            7776653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.012  Score=43.13  Aligned_cols=43  Identities=28%  Similarity=0.406  Sum_probs=37.7

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   58 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~   58 (280)
                      +++||+++|.|-+.-+|+-++..|.++|++|..+......+++
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~   76 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH   76 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence            6899999999999999999999999999999888776554443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.01  Score=43.78  Aligned_cols=42  Identities=14%  Similarity=0.179  Sum_probs=37.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   57 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~   57 (280)
                      +++||+++|.|-+.-+|+-++..|+++|+.|.++......+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            789999999999999999999999999999999887655444

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.023  Score=41.41  Aligned_cols=40  Identities=20%  Similarity=0.300  Sum_probs=35.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   56 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~   56 (280)
                      .|.||+++|.|= |.||+.+|+.+...|++|++++.++-++
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchh
Confidence            589999999986 6999999999999999999999987543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.34  E-value=0.054  Score=39.21  Aligned_cols=39  Identities=23%  Similarity=0.378  Sum_probs=33.0

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      |-|.|- |-+|+.+|+.|+++|++|+..+|++++.+++.+
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            455554 899999999999999999999999988776644

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.23  E-value=0.027  Score=42.20  Aligned_cols=40  Identities=18%  Similarity=0.091  Sum_probs=35.5

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ...++.++++.|.|. |.||+++++.+...|.+|+..++..
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          38 HAYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             cceeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            345789999999996 8999999999999999999999864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.041  Score=41.15  Aligned_cols=38  Identities=11%  Similarity=0.088  Sum_probs=33.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ..+.++++.|.|- |.||+.+|+.+...|.+|+..++..
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            3689999999965 8999999999999999999998854

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.87  E-value=0.031  Score=40.17  Aligned_cols=41  Identities=27%  Similarity=0.342  Sum_probs=34.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhC-CeEEEEecChhHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G-~~v~l~~r~~~~~~~~~~~   62 (280)
                      ++.+.|+ |-+|.++++.|.+.| ++|++++|++++++.+.++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3566666 999999999999988 7899999999888776654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.86  E-value=0.014  Score=42.35  Aligned_cols=34  Identities=24%  Similarity=0.316  Sum_probs=30.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      +|+|.|+ |.+|..++..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5788888 999999999999999999999998754

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.68  E-value=0.81  Score=36.69  Aligned_cols=84  Identities=11%  Similarity=0.005  Sum_probs=55.6

Q ss_pred             CCCcEEEEecC-CChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGA-SSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        17 l~~k~vlItG~-~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      -+|++||=..+ +|+++.+    .+..|+ .|+.++.++..++.+.+.+....-...++.++..|..       +.++..
T Consensus       143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~-------~~l~~~  211 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF-------DYFKYA  211 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH-------HHHHHH
T ss_pred             hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH-------HHHHHH
Confidence            35889885554 4555433    345687 5999999998888777776543322346777887654       244444


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                      .+...+.|+||..+..+
T Consensus       212 ~~~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         212 RRHHLTYDIIIIDPPSF  228 (317)
T ss_dssp             HHTTCCEEEEEECCCCC
T ss_pred             HhhcCCCCEEEEcChhh
Confidence            45556899999997644

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.52  E-value=0.11  Score=38.09  Aligned_cols=40  Identities=18%  Similarity=0.334  Sum_probs=34.3

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~   62 (280)
                      +-|. |.|-.|.++|+.|+++|++|.+.+|++++.+++.++
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            3344 568999999999999999999999999988887665

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.48  E-value=0.027  Score=41.41  Aligned_cols=38  Identities=24%  Similarity=0.271  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      .+++||+++|.|-|.-+|+-++..|+++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            38999999999999999999999999999999887654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.47  E-value=0.3  Score=39.22  Aligned_cols=83  Identities=8%  Similarity=-0.087  Sum_probs=55.1

Q ss_pred             CCcEEEEec-CCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTG-ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vlItG-~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      ++++||=.. ++|+++.+    ++..|++|+.++.+...++.+.+......-...++.++..|+.       +.++....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~-------~~l~~~~~  200 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM-------KFIQREER  200 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH-------HHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH-------HhHHHHhh
Confidence            577888444 44554444    4567999999999998888777765433222235677777654       34555555


Q ss_pred             HcCCccEEEECCCCC
Q 023555           97 AFGRIDALVNNAGVS  111 (280)
Q Consensus        97 ~~g~id~li~~ag~~  111 (280)
                      ...+.|+||.++-.+
T Consensus       201 ~~~~fD~IilDPP~f  215 (309)
T d2igta1         201 RGSTYDIILTDPPKF  215 (309)
T ss_dssp             HTCCBSEEEECCCSE
T ss_pred             cCCCCCEEEECCCcc
Confidence            556899999997544

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.46  E-value=0.025  Score=42.38  Aligned_cols=42  Identities=12%  Similarity=0.243  Sum_probs=35.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   62 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~   62 (280)
                      +++.|.|+ |.-|.++|..|++.|++|.+.+|+++..+.+.+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            46888887 6799999999999999999999998877665543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.44  E-value=0.03  Score=43.28  Aligned_cols=34  Identities=32%  Similarity=0.394  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      ..|.|+|.|| |-.|.++|..|+++|++|.+++|.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3567888888 899999999999999999999985

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.42  E-value=0.036  Score=38.30  Aligned_cols=37  Identities=24%  Similarity=0.240  Sum_probs=32.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +-++|+++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        27 ~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            345788988877 8999999999999999999998864

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.39  E-value=0.35  Score=35.04  Aligned_cols=117  Identities=11%  Similarity=-0.021  Sum_probs=62.7

Q ss_pred             EEEEecC-CChhHHHHHHHHHHh----CCeEEEEecChhH--HHHHHHHH---HhhcCCCcceEEEEeccCCCHHHHHHH
Q 023555           21 VVMVTGA-SSGLGREFCLDLAKA----GCRIVAAARRVDR--LKSLCDEI---NKQSGSSVRAMAVELDVSANGAAIENS   90 (280)
Q Consensus        21 ~vlItG~-~~giG~a~a~~l~~~----G~~v~l~~r~~~~--~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~   90 (280)
                      ++.|.|| +.+.+..++..+...    +..+++.+.+++.  ++......   ....+.  ...  ....+ +.   .+.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~--~~~--~~~~t-d~---~~a   74 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGV--PIE--IHLTL-DR---RRA   74 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTC--CCE--EEEES-CH---HHH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCC--Cce--eeecC-Cc---hhh
Confidence            4666675 556667776666543    2379999998753  33222211   111111  111  11222 21   122


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhh------------------hhHHHHHHHHHHHHHHhcCC
Q 023555           91 VQKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTN------------------LTGSWLVSKYVCIRMRDANQ  152 (280)
Q Consensus        91 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n------------------~~~~~~l~~~~~~~~~~~~~  152 (280)
                      +       ..-|++|+.+|...         .+.+.+...+.                  ......+++.+.+.+.+..+
T Consensus        75 l-------~gaDvVv~ta~~~~---------~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~p  138 (169)
T d1s6ya1          75 L-------DGADFVTTQFRVGG---------LEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP  138 (169)
T ss_dssp             H-------TTCSEEEECCCTTH---------HHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             c-------CCCCEEEEccccCC---------CCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCC
Confidence            2       36799999998742         12222222221                  23455677888888888776


Q ss_pred             CCeEEEEec
Q 023555          153 EGSVINISS  161 (280)
Q Consensus       153 ~g~vv~vsS  161 (280)
                      .+.++++|.
T Consensus       139 da~~i~vtN  147 (169)
T d1s6ya1         139 DAWLINFTN  147 (169)
T ss_dssp             TCEEEECSS
T ss_pred             CeEEEEeCC
Confidence            677777643

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.38  E-value=0.031  Score=38.55  Aligned_cols=36  Identities=14%  Similarity=0.281  Sum_probs=31.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      ++|+++|.|| |.+|..+|..|++.|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3688988887 89999999999999999999998653

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.33  E-value=0.059  Score=40.54  Aligned_cols=73  Identities=16%  Similarity=0.159  Sum_probs=53.0

Q ss_pred             cCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           14 WCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        14 ~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      ..+++||+||=.|+++|+   ++..++..|+ +|+.++.+++.++.+.+.+       ..+.++.+|+. +.        
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-------~~~~~~~~D~~-~l--------  104 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-------GGVNFMVADVS-EI--------  104 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-------TTSEEEECCGG-GC--------
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-------ccccEEEEehh-hc--------
Confidence            458899999999988874   2334666776 5999999988776554433       14677888876 21        


Q ss_pred             HHHHHcCCccEEEECCCC
Q 023555           93 KAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~  110 (280)
                           -+++|++|.|+.+
T Consensus       105 -----~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -----SGKYDTWIMNPPF  117 (197)
T ss_dssp             -----CCCEEEEEECCCC
T ss_pred             -----CCcceEEEeCccc
Confidence                 2589999999854

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.32  E-value=0.24  Score=33.49  Aligned_cols=82  Identities=11%  Similarity=0.094  Sum_probs=57.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ||+|||.--...+...+...|.+.|++|+.+..+.+.+-+..++   .   ...+..+..++. + .+--.+++++.+..
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~---~---~~dliilD~~mp-~-~~G~e~~~~ir~~~   72 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKE---L---KPDIVTMDITMP-E-MNGIDAIKEIMKID   72 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---H---CCSEEEEECSCG-G-GCHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHh---c---cCCEEEEecCCC-C-CCHHHHHHHHHHhC
Confidence            78999999999999999999999999998776665544433332   2   125666666665 3 34456777777776


Q ss_pred             CCccEEEECC
Q 023555           99 GRIDALVNNA  108 (280)
Q Consensus        99 g~id~li~~a  108 (280)
                      ..+-+++..+
T Consensus        73 ~~~pvi~ls~   82 (118)
T d1u0sy_          73 PNAKIIVCSA   82 (118)
T ss_dssp             TTCCEEEEEC
T ss_pred             CCCcEEEEEc
Confidence            6677766653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.31  E-value=0.035  Score=39.91  Aligned_cols=41  Identities=7%  Similarity=0.265  Sum_probs=34.6

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      +.|. |.|-+|.++++.|.+.|+++++.+|+.++.+++.+++
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4455 5599999999999999999999999998888776654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.26  E-value=0.099  Score=38.28  Aligned_cols=116  Identities=15%  Similarity=0.186  Sum_probs=65.5

Q ss_pred             EEEEecCCChhHHH--HHHHHHHh----CCeEEEEecChhHHHHHHHHHHhh---cCCCcceEEEEeccCCCHHHHHHHH
Q 023555           21 VVMVTGASSGLGRE--FCLDLAKA----GCRIVAAARRVDRLKSLCDEINKQ---SGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        21 ~vlItG~~~giG~a--~a~~l~~~----G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ++.|.|| |.+|..  +...++..    +.+++++|.++++++.....+...   .+...++  ...  + +   .++.+
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i--~~~--t-d---~~eaL   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKF--EKT--M-N---LDDVI   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEE--EEE--S-C---HHHHH
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEE--EEe--C-C---hhhcc
Confidence            5677786 556654  44445432    458999999998876554444332   2222111  111  1 2   12233


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHh---------------h---------hhHHHHHHHHHHHHH
Q 023555           92 QKAWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKT---------------N---------LTGSWLVSKYVCIRM  147 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~---------------n---------~~~~~~l~~~~~~~~  147 (280)
                             ...|++|+.++..+         .+.+++...+               +         ......+++.+.+.+
T Consensus        75 -------~dad~Vv~~~~~g~---------~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i  138 (171)
T d1obba1          75 -------IDADFVINTAMVGG---------HTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKI  138 (171)
T ss_dssp             -------TTCSEEEECCCTTH---------HHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHH
T ss_pred             -------cCCCeEeeeccccc---------ccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHH
Confidence                   37899999987641         2222221111               1         123667788888999


Q ss_pred             HhcCCCCeEEEEec
Q 023555          148 RDANQEGSVINISS  161 (280)
Q Consensus       148 ~~~~~~g~vv~vsS  161 (280)
                      .+..+.+.++++|.
T Consensus       139 ~~~~p~a~~i~~TN  152 (171)
T d1obba1         139 EKLSPKAWYLQAAN  152 (171)
T ss_dssp             HHHCTTCEEEECSS
T ss_pred             HHHCcCeEEEEECC
Confidence            88776777777754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.11  E-value=0.053  Score=39.33  Aligned_cols=39  Identities=18%  Similarity=0.228  Sum_probs=32.7

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   60 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~   60 (280)
                      +|-|.| .|-+|.++|+.|+++|++|.+.+|+.++.+.+.
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            455664 589999999999999999999999988766554

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.10  E-value=0.028  Score=47.72  Aligned_cols=63  Identities=24%  Similarity=0.304  Sum_probs=46.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh-------------------hHHHHHHHHHHhhcCCCcceEEE
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKQSGSSVRAMAV   76 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   76 (280)
                      |++.+|||.|+ ||||..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++.++ .+++...
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np-~v~i~~~  112 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP-NCNVVPH  112 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST-TCCCEEE
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCC-CCceEee
Confidence            66789999999 7899999999999999 688998631                   255666666655543 4556655


Q ss_pred             EeccC
Q 023555           77 ELDVS   81 (280)
Q Consensus        77 ~~D~~   81 (280)
                      ..++.
T Consensus       113 ~~~i~  117 (426)
T d1yovb1         113 FNKIQ  117 (426)
T ss_dssp             CSCGG
T ss_pred             ecccc
Confidence            55554

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.92  E-value=0.27  Score=36.52  Aligned_cols=83  Identities=19%  Similarity=0.352  Sum_probs=59.3

Q ss_pred             CCcEEE-EecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           18 DNKVVM-VTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        18 ~~k~vl-ItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      .+.+++ +|.|+||...++.+.+ . +.+|+.+|++++.++.+.+.+...   ..++.++..+++ +   +...+...  
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~---~~r~~~~~~~f~-~---~~~~~~~~--   91 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF---SDRVSLFKVSYR-E---ADFLLKTL--   91 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG---TTTEEEEECCGG-G---HHHHHHHT--
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc---cccccchhHHHh-h---HHHHHHHc--
Confidence            445544 7788888888888876 3 468999999999998888777553   237888999887 3   22222221  


Q ss_pred             HcCCccEEEECCCCC
Q 023555           97 AFGRIDALVNNAGVS  111 (280)
Q Consensus        97 ~~g~id~li~~ag~~  111 (280)
                      ..+++|.++...|+.
T Consensus        92 ~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          92 GIEKVDGILMDLGVS  106 (192)
T ss_dssp             TCSCEEEEEEECSCC
T ss_pred             CCCCcceeeeccchh
Confidence            135899999998874

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.78  E-value=0.22  Score=36.62  Aligned_cols=42  Identities=17%  Similarity=0.173  Sum_probs=36.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   61 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~   61 (280)
                      .-.++|.|| +-.|.+-++.....|++|.+.|.+.+.++++..
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            447888888 789999999999999999999999988777654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.75  E-value=0.045  Score=37.33  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=30.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      |.++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            78888888 8999999999999999999998865

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.73  E-value=0.051  Score=37.72  Aligned_cols=70  Identities=20%  Similarity=0.169  Sum_probs=46.9

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      |.++|.|. +.+|+.+++.|  +|.+|++++.+++..+.....         .+.++.+|.+ +++.++++      ...
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~---------~~~~i~Gd~~-~~~~L~~a------~i~   61 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRS---------GANFVHGDPT-RVSDLEKA------NVR   61 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHT---------TCEEEESCTT-SHHHHHHT------TCT
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhc---------CccccccccC-CHHHHHHh------hhh
Confidence            45777775 88999999999  466788888888776654221         4567889998 54333332      223


Q ss_pred             CccEEEECC
Q 023555          100 RIDALVNNA  108 (280)
Q Consensus       100 ~id~li~~a  108 (280)
                      +.+.+|...
T Consensus        62 ~A~~vi~~~   70 (129)
T d2fy8a1          62 GARAVIVNL   70 (129)
T ss_dssp             TCSEEEECC
T ss_pred             cCcEEEEec
Confidence            667777654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.71  E-value=0.15  Score=38.93  Aligned_cols=44  Identities=11%  Similarity=-0.017  Sum_probs=37.2

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      -.+++||..|++.|   ..+..|++.|++|+.++-+++..+.+.++.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            46889999999887   457889999999999999998888776654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.70  E-value=0.65  Score=34.56  Aligned_cols=78  Identities=18%  Similarity=0.244  Sum_probs=55.6

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHH
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSV   91 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   91 (280)
                      ...+++|++||=.|+++|.   ++..++..|+ +|+.++.+++.++.+.+.+...   ..+..++..|+. ..       
T Consensus        41 ~~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~---~~~~~~~~~d~~-~~-------  106 (201)
T d1wy7a1          41 SLGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF---KGKFKVFIGDVS-EF-------  106 (201)
T ss_dssp             HTTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG---TTSEEEEESCGG-GC-------
T ss_pred             hcCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc---CCCceEEECchh-hh-------
Confidence            3457899999988877662   2233456786 7999999998888877766543   245667777765 21       


Q ss_pred             HHHHHHcCCccEEEECCCC
Q 023555           92 QKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        92 ~~~~~~~g~id~li~~ag~  110 (280)
                            .+++|++|.|+.+
T Consensus       107 ------~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 ------NSRVDIVIMNPPF  119 (201)
T ss_dssp             ------CCCCSEEEECCCC
T ss_pred             ------CCcCcEEEEcCcc
Confidence                  3589999999865

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.68  E-value=0.088  Score=38.08  Aligned_cols=40  Identities=15%  Similarity=0.263  Sum_probs=36.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   56 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~   56 (280)
                      .+.||+++|.|= |-+|+.+|++|...|++|+++..++-++
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a   59 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA   59 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh
Confidence            588999999986 8999999999999999999999998553

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.52  E-value=0.036  Score=43.65  Aligned_cols=34  Identities=24%  Similarity=0.169  Sum_probs=29.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +|+|+|.|| |--|.++|..|++.|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999987 7788999999999999999998653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.48  E-value=0.12  Score=35.87  Aligned_cols=73  Identities=16%  Similarity=0.195  Sum_probs=53.4

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEE-EEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFG   99 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   99 (280)
                      ++.|.|++|..|+++++.+.+.|+.++ .++++....      +   .    ... +..|+| .++...+.++.+.+.  
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~---~----~~D-VvIDFS-~p~~~~~~l~~~~~~--   64 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L---D----SPD-VVIDFS-SPEALPKTVDLCKKY--   64 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C---S----CCS-EEEECS-CGGGHHHHHHHHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h---c----cCC-EEEEec-CHHHHHHHHHHHHhc--
Confidence            489999999999999999999999865 444432110      0   0    111 467999 788999999988877  


Q ss_pred             CccEEEECCCC
Q 023555          100 RIDALVNNAGV  110 (280)
Q Consensus       100 ~id~li~~ag~  110 (280)
                      ++-+++-..|.
T Consensus        65 ~~p~ViGTTG~   75 (128)
T d1vm6a3          65 RAGLVLGTTAL   75 (128)
T ss_dssp             TCEEEECCCSC
T ss_pred             CCCEEEEcCCC
Confidence            56677777775

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.48  E-value=0.44  Score=38.35  Aligned_cols=83  Identities=13%  Similarity=0.106  Sum_probs=55.9

Q ss_pred             CCCCcEEEEecCC-ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~-~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..+|++||=.++. |+++.+    ++..|.+|+.++.++..++.+.+.+... +. ..+.++..|..       +..+..
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~n-gl-~~~~~i~~d~~-------~~~~~~  209 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLN-GL-GNVRVLEANAF-------DLLRRL  209 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHT-TC-TTEEEEESCHH-------HHHHHH
T ss_pred             HhCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHc-CC-CCcceeeccHH-------HHhhhh
Confidence            4689999966655 444433    4456778999999999888887776543 22 25667777654       233344


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                      ....++.|.||.++...
T Consensus       210 ~~~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         210 EKEGERFDLVVLDPPAF  226 (318)
T ss_dssp             HHTTCCEEEEEECCCCS
T ss_pred             HhhhcCCCEEEEcCCcc
Confidence            44456899999998654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.46  E-value=0.048  Score=37.53  Aligned_cols=34  Identities=24%  Similarity=0.349  Sum_probs=30.4

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +|.++|.|| |.+|..+|..|++.|.+|.++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478888887 8999999999999999999998864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.43  E-value=0.066  Score=39.63  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=33.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .-+.|.|+|.|| |--|.+.|..|+++|++|.++.+.+
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            466899999998 7889999999999999999999865

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.34  E-value=0.083  Score=39.13  Aligned_cols=37  Identities=22%  Similarity=0.273  Sum_probs=33.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .+.||++.|.|. |.||+.+++.+...|++|+..+|..
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            589999999998 5699999999999999999999874

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.056  Score=37.35  Aligned_cols=34  Identities=18%  Similarity=0.148  Sum_probs=30.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .|.++|.|| |-||..+|..|++.|.+|.++.|.+
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            378889988 6899999999999999999999864

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.26  E-value=0.34  Score=32.51  Aligned_cols=71  Identities=21%  Similarity=0.358  Sum_probs=50.5

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ...++.|.|| |=+|+-++.+..+.|+++++.+.++.....           ..--.++..|.. +.+.+.+++...   
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~-----------~va~~~i~~~~~-d~~~l~~~~~~~---   73 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-----------HVAHRSHVINML-DGDALRRVVELE---   73 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-----------GGSSEEEECCTT-CHHHHHHHHHHH---
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh-----------hcCCeEEECCCC-CHHHHHHHHHhh---
Confidence            4457999995 789999999999999999999987653221           112345678887 666666666542   


Q ss_pred             cCCccEEEE
Q 023555           98 FGRIDALVN  106 (280)
Q Consensus        98 ~g~id~li~  106 (280)
                        .+|++..
T Consensus        74 --~~DviT~   80 (111)
T d1kjqa2          74 --KPHYIVP   80 (111)
T ss_dssp             --CCSEEEE
T ss_pred             --CCceEEE
Confidence              6788843

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.22  E-value=0.12  Score=36.25  Aligned_cols=76  Identities=18%  Similarity=0.230  Sum_probs=50.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHh-CCeEE-EEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           21 VVMVTGASSGLGREFCLDLAKA-GCRIV-AAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~-G~~v~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ++.|.|++|..|+++++...+. ++.++ .+++.+ .+..    +...   ...   +..|+| .++...+.++.+.+. 
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~----~~~~---~~D---vvIDFS-~p~~~~~~~~~~~~~-   67 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL----LTDG---NTE---VVIDFT-HPDVVMGNLEFLIDN-   67 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH----HHTT---TCS---EEEECC-CTTTHHHHHHHHHHT-
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh----hccc---cCC---EEEEcc-cHHHHHHHHHHHHhc-
Confidence            5789999999999999987764 55654 445432 2221    1111   111   567898 678888888888776 


Q ss_pred             CCccEEEECCCC
Q 023555           99 GRIDALVNNAGV  110 (280)
Q Consensus        99 g~id~li~~ag~  110 (280)
                       ++-++|-..|+
T Consensus        68 -~~~~ViGTTG~   78 (135)
T d1yl7a1          68 -GIHAVVGTTGF   78 (135)
T ss_dssp             -TCEEEECCCCC
T ss_pred             -CCCEEEecccc
Confidence             66678777665

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.13  E-value=0.43  Score=38.48  Aligned_cols=82  Identities=12%  Similarity=0.104  Sum_probs=54.8

Q ss_pred             CCcEEEEecCC-ChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGAS-SGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~-~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      +|++||=.++. |+++.+    ++..|+ +|+.++.+++.++.+.+.+.. .+...++.++..|+.       .......
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~-ngl~~~~~~~~~d~~-------~~~~~~~  212 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKL-NGVEDRMKFIVGSAF-------EEMEKLQ  212 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHH-TTCGGGEEEEESCHH-------HHHHHHH
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHH-cCCCccceeeechhh-------hhhHHHH
Confidence            48888866655 454443    345676 699999999988887777644 344446777777654       2334444


Q ss_pred             HHcCCccEEEECCCCC
Q 023555           96 EAFGRIDALVNNAGVS  111 (280)
Q Consensus        96 ~~~g~id~li~~ag~~  111 (280)
                      ....+.|.||.++...
T Consensus       213 ~~~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         213 KKGEKFDIVVLDPPAF  228 (324)
T ss_dssp             HTTCCEEEEEECCCCS
T ss_pred             hccCCCCchhcCCccc
Confidence            4456899999998654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.09  E-value=0.086  Score=35.94  Aligned_cols=37  Identities=24%  Similarity=0.222  Sum_probs=32.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ...+|.++|.|| |-||..+|..|++.|.+|.++.|.+
T Consensus        19 ~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          19 YEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             SCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             hCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            345789999888 8999999999999999999999864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.03  E-value=0.059  Score=36.82  Aligned_cols=34  Identities=18%  Similarity=0.160  Sum_probs=30.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .|+++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888887 8999999999999999999999864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.01  E-value=0.046  Score=40.45  Aligned_cols=34  Identities=18%  Similarity=0.165  Sum_probs=30.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~   53 (280)
                      +|+|+|.|| |-.|..+|..|+++|++ |.++.+.+
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            688999988 89999999999999995 98988864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.88  E-value=0.073  Score=36.19  Aligned_cols=33  Identities=21%  Similarity=0.108  Sum_probs=29.4

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      |.++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            66778777 8999999999999999999999865

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.79  E-value=0.071  Score=36.15  Aligned_cols=34  Identities=21%  Similarity=0.361  Sum_probs=29.7

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .|.++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            367888876 8999999999999999999998864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.58  E-value=0.084  Score=36.28  Aligned_cols=34  Identities=15%  Similarity=0.239  Sum_probs=30.2

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      -|.++|.|| |-||..+|..|++.|.+|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            368888887 8999999999999999999998864

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.42  E-value=0.86  Score=32.58  Aligned_cols=75  Identities=12%  Similarity=0.030  Sum_probs=42.0

Q ss_pred             EEEEecCCChhHHHHHHH-HHHh-----CCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           21 VVMVTGASSGLGREFCLD-LAKA-----GCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~-l~~~-----G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ++.|.||++ +|..++-. +++.     +..++++|.++++++...+..+.......++   ..  +.+.   ++.+   
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~---~~--t~~~---~~~l---   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV---LI--SDTF---EGAV---   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE---EE--CSSH---HHHH---
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE---EE--ecCc---cccc---
Confidence            477888754 56555533 3322     3479999999988775544333322222221   11  2121   2222   


Q ss_pred             HHHcCCccEEEECCCCC
Q 023555           95 WEAFGRIDALVNNAGVS  111 (280)
Q Consensus        95 ~~~~g~id~li~~ag~~  111 (280)
                          ...|++|..+|..
T Consensus        70 ----~~aDvVVita~~~   82 (162)
T d1up7a1          70 ----VDAKYVIFQFRPG   82 (162)
T ss_dssp             ----TTCSEEEECCCTT
T ss_pred             ----CCCCEEEEecccC
Confidence                3789999999864

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.33  E-value=0.2  Score=39.96  Aligned_cols=25  Identities=20%  Similarity=0.150  Sum_probs=22.1

Q ss_pred             CChhHHHHHHHHHHhCCeEEEEecC
Q 023555           28 SSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        28 ~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            5789999999999999999988653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.30  E-value=0.1  Score=36.40  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=31.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .+|+++|.|| |-+|..+|..|++.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4788999877 8999999999999999999998864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.20  E-value=0.11  Score=35.49  Aligned_cols=34  Identities=21%  Similarity=0.167  Sum_probs=30.1

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .+.++|.|| |-||..+|..|++.|.+|.++.+.+
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            377888887 8999999999999999999988754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.01  E-value=0.22  Score=36.59  Aligned_cols=33  Identities=21%  Similarity=0.414  Sum_probs=28.6

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      +|.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4667777 89999999999999999999998543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.01  E-value=0.1  Score=37.67  Aligned_cols=35  Identities=14%  Similarity=0.110  Sum_probs=29.9

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCC--eEEEEecCh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRV   53 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~--~v~l~~r~~   53 (280)
                      .||+|+|.|| |-.|..+|..|.+.|.  +|+++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 7889999999999986  578887654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.01  E-value=0.086  Score=42.61  Aligned_cols=36  Identities=22%  Similarity=0.304  Sum_probs=31.3

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      ++|.|+|.|| |--|..+|..|++.|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4789999998 67889999999999999999987653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.98  E-value=0.12  Score=36.81  Aligned_cols=37  Identities=11%  Similarity=0.073  Sum_probs=29.8

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      |-|. |.|-+|+++|+.|.++|++|+..+++..+....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            4455 559999999999999999999998876655443

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.96  E-value=0.074  Score=41.60  Aligned_cols=32  Identities=19%  Similarity=0.167  Sum_probs=28.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      -|+|.|| |-.|.++|..|+++|.+|+++++.+
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3777777 8999999999999999999999864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.86  E-value=0.14  Score=36.46  Aligned_cols=37  Identities=16%  Similarity=0.102  Sum_probs=30.3

Q ss_pred             CCcEEEEe-cCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           18 DNKVVMVT-GASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        18 ~~k~vlIt-G~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      .++.++|. .+++.||.++|..|++.|.+|.++.+.+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            35566655 46699999999999999999999998753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.77  E-value=0.098  Score=35.94  Aligned_cols=34  Identities=21%  Similarity=0.246  Sum_probs=30.5

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .|.++|.|| |-||..+|..|++.|.+|.++.|.+
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            467888887 8999999999999999999998865

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.74  E-value=1.8  Score=31.92  Aligned_cols=141  Identities=13%  Similarity=0.134  Sum_probs=76.6

Q ss_pred             CCCCcEEEEecCC--ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~--~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ...++++++....  .....+++..|...|..++.+.-...                           .+.   ..+. +
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~---------------------------~~~---~~l~-~   70 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR---------------------------CGR---DELA-E   70 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT---------------------------CCH---HHHH-H
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc---------------------------cCH---HHHH-H
Confidence            3456655555332  34677788888888887765543221                           121   1222 2


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccccCCCCCCC
Q 023555           94 AWEAFGRIDALVNNAGVSGAVKSPLDLTEEEWNHIMKTNLTGSWLVSKYVCIRMRDANQEGSVINISSIAATSRGQLPGG  173 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~vv~vsS~~~~~~~~~~~~  173 (280)
                      .....+.++.+|+..+...........        ....+...+.++|++.    +.....++.+++......   .++.
T Consensus        71 ~~~~~~~~~~vv~l~~~~~~~~~~~~~--------~~~~~~~~l~l~qal~----~~~~~~~l~~vT~~a~~~---~~~d  135 (209)
T d2fr1a2          71 RLRSVGEVAGVLSLLAVDEAEPEEAPL--------ALASLADTLSLVQAMV----SAELGCPLWTVTESAVAT---GPFE  135 (209)
T ss_dssp             HHTTSCCCSEEEECTTTTCCCCSSCGG--------GCHHHHHHHHHHHHHH----HTTCCCCEEEEEESCSCS---STTS
T ss_pred             HhhccCCCCeEEEeCCCCCCCCcchhH--------HHHHHHHHHHHHHHHH----hCCCCCcEEEEEcCCccc---CCCc
Confidence            233446788999987654221111111        0112344556666653    233346677776533211   1222


Q ss_pred             CCChhhHHHHHHHHHHHHHHhCCCCeEEEEe
Q 023555          174 VAYASSKAGLNAMTKCLSLELGVHKIRVNSI  204 (280)
Q Consensus       174 ~~Y~~sK~a~~~l~~~la~~~~~~gi~vn~v  204 (280)
                      ..-....+++-+|+|+++.|+-.  +++-+|
T Consensus       136 ~~~~p~~A~l~Gl~r~~~~E~P~--l~~~~v  164 (209)
T d2fr1a2         136 RVRNAAHGALWGVGRVIALENPA--VWGGLV  164 (209)
T ss_dssp             CCSCGGGHHHHHHHHHHHHHCGG--GEEEEE
T ss_pred             ccCCHhHHhHHHHHHHHHHhCCC--ceEEEE
Confidence            34456789999999999999854  444443

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.70  E-value=0.099  Score=35.89  Aligned_cols=32  Identities=28%  Similarity=0.226  Sum_probs=28.5

Q ss_pred             cEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           20 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      |.++|.|| |-||..+|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56788877 899999999999999999988875

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=91.69  E-value=0.78  Score=35.90  Aligned_cols=80  Identities=18%  Similarity=0.183  Sum_probs=53.3

Q ss_pred             CcEEEEecCCCh-hHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           19 NKVVMVTGASSG-LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        19 ~k~vlItG~~~g-iG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .++++-.|+++| |+.+++ .  ...++|+.++.+++.++-+.+.... .+...++.+...|+.+ .         ....
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~-~~~~~~~~i~~~~~~~-~---------~~~~  176 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAER-HGVSDRFFVRKGEFLE-P---------FKEK  176 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHH-TTCTTSEEEEESSTTG-G---------GGGG
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHH-cCCCceeEEeeccccc-c---------cccc
Confidence            345665555555 444443 2  3567899999999988887777654 3444567777777762 1         2233


Q ss_pred             cCCccEEEECCCCCC
Q 023555           98 FGRIDALVNNAGVSG  112 (280)
Q Consensus        98 ~g~id~li~~ag~~~  112 (280)
                      ++++|++|.|+.+..
T Consensus       177 ~~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         177 FASIEMILSNPPYVK  191 (271)
T ss_dssp             TTTCCEEEECCCCBC
T ss_pred             cCcccEEEEcccccC
Confidence            478999999998763

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.61  E-value=1.1  Score=31.69  Aligned_cols=44  Identities=23%  Similarity=0.354  Sum_probs=32.2

Q ss_pred             cEEEEecCCChhHHHHHHHHHHh--CCeEEEE--ecChhHHHHHHHHH
Q 023555           20 KVVMVTGASSGLGREFCLDLAKA--GCRIVAA--ARRVDRLKSLCDEI   63 (280)
Q Consensus        20 k~vlItG~~~giG~a~a~~l~~~--G~~v~l~--~r~~~~~~~~~~~~   63 (280)
                      |++.|.|+||.||.+...-..++  .++|+.+  .++-+.+.+.+.++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            68999999999999999988876  3566433  34455566655554

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.59  E-value=0.14  Score=38.36  Aligned_cols=37  Identities=8%  Similarity=0.139  Sum_probs=31.3

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHH
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   59 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~   59 (280)
                      +.|. |.|-+|..+|..|++.|++|+.+|.+.+..+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            5555 569999999999999999999999988765554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.52  E-value=0.3  Score=33.46  Aligned_cols=34  Identities=15%  Similarity=0.177  Sum_probs=30.3

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .|.++|.|| |-||..+|..|++.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            478888888 8999999999999999999998754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.43  E-value=0.11  Score=40.00  Aligned_cols=35  Identities=26%  Similarity=0.234  Sum_probs=30.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      ..++|+|.|| |--|..+|..|+++|.+|+++.++.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4567999998 7889999999999999999999864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.35  E-value=0.1  Score=41.50  Aligned_cols=35  Identities=26%  Similarity=0.278  Sum_probs=30.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +.|+|+|.|| |--|.++|..|+++|++|.++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999998 6779999999999999999998764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.33  E-value=0.13  Score=40.28  Aligned_cols=34  Identities=24%  Similarity=0.298  Sum_probs=31.1

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA   50 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~   50 (280)
                      +++||+++|-| .|.+|+.+++.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            78999999999 59999999999999999988664

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.05  E-value=0.18  Score=38.51  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=32.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .-.+|.++|.|| |-.|.+.|..|+++|++|.++.++.
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            357899999998 6779999999999999999998754

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.97  E-value=0.062  Score=36.00  Aligned_cols=42  Identities=10%  Similarity=0.048  Sum_probs=33.8

Q ss_pred             CcccCCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           11 LEPWCQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        11 ~~~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .+.-.+++||+|+|.|++ --|..+|..|++.+.++++..|..
T Consensus        24 y~~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          24 FREPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CCCGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CcchhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            334457999999999985 677899999999998887777654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=90.96  E-value=0.17  Score=37.01  Aligned_cols=47  Identities=15%  Similarity=0.093  Sum_probs=39.3

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHh
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   65 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~   65 (280)
                      ..+|++||..|++.|   ..+..|+++|++|+.++.++..++.+.+...+
T Consensus        18 ~~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_          18 VVPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             CCTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            456889999999887   36778999999999999999988887776643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.58  E-value=0.17  Score=39.28  Aligned_cols=36  Identities=25%  Similarity=0.424  Sum_probs=31.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR   51 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r   51 (280)
                      .+++||+++|-| .|.+|+.+|+.|.+.|++|+.++.
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            379999999997 599999999999999999886653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.43  E-value=0.13  Score=38.79  Aligned_cols=31  Identities=16%  Similarity=0.128  Sum_probs=27.4

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      |+|.|| |--|..+|..|+++|.+|+++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677775 8889999999999999999998864

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.77  E-value=0.14  Score=40.19  Aligned_cols=38  Identities=13%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             CCCcEEEEecCCChhHHHH-----HHHHHHhCCeEEEEecChh
Q 023555           17 LDNKVVMVTGASSGLGREF-----CLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~-----a~~l~~~G~~v~l~~r~~~   54 (280)
                      =.++.++|+.|=||.|+.+     |..|+++|.+|++++-++.
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3566777777799999987     7899999999999998854

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.77  E-value=0.74  Score=36.61  Aligned_cols=78  Identities=15%  Similarity=0.223  Sum_probs=53.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      ..++||+||-.|++.|+   ++..+++.|+ +|+.++.++.. ..+.+.. ...+...++.++..|+.+ ..        
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~-~~~~~~~~i~~~~~~~~~-l~--------   97 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDII-RLNKLEDTITLIKGKIEE-VH--------   97 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHH-HHTTCTTTEEEEESCTTT-SC--------
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHH-HHhCCCccceEEEeeHHH-hc--------
Confidence            35789999999999886   5566778897 69999988754 3333333 333445578888888873 21        


Q ss_pred             HHHHcCCccEEEECC
Q 023555           94 AWEAFGRIDALVNNA  108 (280)
Q Consensus        94 ~~~~~g~id~li~~a  108 (280)
                        ....++|+++...
T Consensus        98 --~~~~~~D~Ivse~  110 (311)
T d2fyta1          98 --LPVEKVDVIISEW  110 (311)
T ss_dssp             --CSCSCEEEEEECC
T ss_pred             --CccccceEEEEee
Confidence              0124789999764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.77  E-value=0.15  Score=39.81  Aligned_cols=31  Identities=29%  Similarity=0.380  Sum_probs=27.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      -|+|.|| |-.|.++|..|+++|.+|+++.+.
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            4778877 889999999999999999999875

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=89.62  E-value=1  Score=30.13  Aligned_cols=81  Identities=14%  Similarity=0.177  Sum_probs=54.0

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      ||+|||.--...+-..+.+.|.+.|++|.......+.++.    +.+.   ...+..+...+. +. +--++++++.+..
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~----~~~~---~~dlillD~~mP-~~-~G~el~~~lr~~~   71 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDI----VTKE---RPDLVLLDMKIP-GM-DGIEILKRMKVID   71 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHH----HHHH---CCSEEEEESCCT-TC-CHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHH----HHhC---CCCEEEEeccCC-CC-CHHHHHHHHHHhC
Confidence            6899999999999999999999999998865543333332    2222   125666666665 33 3346677777766


Q ss_pred             CCccEEEECC
Q 023555           99 GRIDALVNNA  108 (280)
Q Consensus        99 g~id~li~~a  108 (280)
                      ..+-+++..+
T Consensus        72 ~~~pvi~lt~   81 (119)
T d1peya_          72 ENIRVIIMTA   81 (119)
T ss_dssp             TTCEEEEEES
T ss_pred             CCCcEEEEec
Confidence            6666666554

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.57  E-value=0.24  Score=39.38  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=31.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR   51 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r   51 (280)
                      +++||+++|-|- |.+|+.+|+.|.+.|++|+.++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            689999999987 79999999999999999887753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.87  E-value=0.2  Score=39.61  Aligned_cols=32  Identities=19%  Similarity=0.326  Sum_probs=27.5

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV   53 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~   53 (280)
                      .|+|.|| |-+|.++|..|+++|. +|.+++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4788887 7999999999999997 599998863

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=88.64  E-value=0.16  Score=37.99  Aligned_cols=31  Identities=26%  Similarity=0.369  Sum_probs=27.6

Q ss_pred             cEEEEecCCChhHHH-----HHHHHHHhCCeEEEEe
Q 023555           20 KVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAA   50 (280)
Q Consensus        20 k~vlItG~~~giG~a-----~a~~l~~~G~~v~l~~   50 (280)
                      |+++|||-++|.|+.     +|++|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999986     5788899999999986

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.37  E-value=0.44  Score=33.83  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=32.4

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHh--CCeEEEE-e-cChhHHHHHHHHH
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKA--GCRIVAA-A-RRVDRLKSLCDEI   63 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~--G~~v~l~-~-r~~~~~~~~~~~~   63 (280)
                      -|++.|.|+||.||.+...-+.+.  .++|+.+ + ++-+.+.+...++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh
Confidence            489999999999999999988875  4666543 3 4455555555443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.23  E-value=0.95  Score=34.34  Aligned_cols=75  Identities=17%  Similarity=0.157  Sum_probs=54.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .-++++||=.|++.|   ..+..|+++|++|+.++.+++-++.+.+...+..   .++.+...|+.+ ..          
T Consensus        39 ~~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~---~~i~~~~~d~~~-l~----------  101 (251)
T d1wzna1          39 KREVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERN---LKIEFLQGDVLE-IA----------  101 (251)
T ss_dssp             SSCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEESCGGG-CC----------
T ss_pred             CCCCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccc---ccchheehhhhh-cc----------
Confidence            345678999998876   3466788999999999999988887777765532   367788888763 11          


Q ss_pred             HHcCCccEEEECC
Q 023555           96 EAFGRIDALVNNA  108 (280)
Q Consensus        96 ~~~g~id~li~~a  108 (280)
                       .-+..|.++..-
T Consensus       102 -~~~~fD~I~~~~  113 (251)
T d1wzna1         102 -FKNEFDAVTMFF  113 (251)
T ss_dssp             -CCSCEEEEEECS
T ss_pred             -cccccchHhhhh
Confidence             113689888753

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.09  E-value=0.9  Score=30.68  Aligned_cols=83  Identities=11%  Similarity=0.122  Sum_probs=53.6

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |+.++|||.--...+...+.+.|.+.|++|.....-.+..+.    +.+.   ...+..+...+. + .+-..++.++.+
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~----l~~~---~~dlii~D~~mp-~-~~G~el~~~l~~   71 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAA----LASK---TPDVLLSDIRMP-G-MDGLALLKQIKQ   71 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHHHH----HTTC---CCSEEEECCSSS-S-STTHHHHHHHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHH----HHhC---CCCEEEehhhcC-C-chHHHHHHHHHH
Confidence            455689999999999999999999999999866554443332    3221   224555554444 2 233456777777


Q ss_pred             HcCCccEEEECC
Q 023555           97 AFGRIDALVNNA  108 (280)
Q Consensus        97 ~~g~id~li~~a  108 (280)
                      .+..+-+++..+
T Consensus        72 ~~~~~piI~~t~   83 (123)
T d1krwa_          72 RHPMLPVIIMTA   83 (123)
T ss_dssp             HSSSCCEEESCC
T ss_pred             hCCCCeEEEEec
Confidence            666665555444

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.74  E-value=3.2  Score=28.90  Aligned_cols=79  Identities=16%  Similarity=0.185  Sum_probs=53.8

Q ss_pred             CCCCcEEEEecCC-ChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGAS-SGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vlItG~~-~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++|+.+|=.|++ |.+|.+    ++.+|+ +|+.++.+.+..+.+.+.+.. .+...++..+..|..       +.++ 
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~-~~~~~~~~ii~~D~~-------~~l~-   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIM-TKAENRFTLLKMEAE-------RAID-   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHT-TTCGGGEEEECSCHH-------HHHH-
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhh-cccccchhhhccccc-------cccc-
Confidence            4789999866655 445553    456787 699999999888877777654 344556888887654       1222 


Q ss_pred             HHHHcCCccEEEECCC
Q 023555           94 AWEAFGRIDALVNNAG  109 (280)
Q Consensus        94 ~~~~~g~id~li~~ag  109 (280)
                        ...++.|+++.++.
T Consensus        79 --~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 --CLTGRFDLVFLDPP   92 (152)
T ss_dssp             --HBCSCEEEEEECCS
T ss_pred             --ccccccceeEechh
Confidence              22357899988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.71  E-value=0.26  Score=35.64  Aligned_cols=32  Identities=22%  Similarity=0.247  Sum_probs=26.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEe
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAA   50 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~   50 (280)
                      +++.|+|.|| |.+|..+|..|.+.|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            4678888887 8999999999999999865443

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.59  E-value=1.4  Score=30.90  Aligned_cols=85  Identities=11%  Similarity=0.080  Sum_probs=51.9

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCC---cceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSS---VRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      |-+.|- |-.|..+|+.|.+.|+.+ ..+|+.++..+..++........   .....+-..+. +.+.+....+.+....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~v~~~~~~l~~~~   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLP-TTREVYEVAEALYPYL   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCS-SHHHHHHHHHHHTTTC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEeccc-chhhhhhhhccccccc
Confidence            445555 899999999999988755 57888777766665542211110   12223333344 4567777777776665


Q ss_pred             CCccEEEECCC
Q 023555           99 GRIDALVNNAG  109 (280)
Q Consensus        99 g~id~li~~ag  109 (280)
                      .+-.++|.+..
T Consensus        80 ~~~~~iid~sT   90 (156)
T d2cvza2          80 REGTYWVDATS   90 (156)
T ss_dssp             CTTEEEEECSC
T ss_pred             ccccccccccc
Confidence            55566665553

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=87.43  E-value=0.75  Score=29.78  Aligned_cols=37  Identities=16%  Similarity=0.170  Sum_probs=28.2

Q ss_pred             CCcEEEEecCCChhH-HHHHHHHHHhCCeEEEEecChhH
Q 023555           18 DNKVVMVTGASSGLG-REFCLDLAKAGCRIVAAARRVDR   55 (280)
Q Consensus        18 ~~k~vlItG~~~giG-~a~a~~l~~~G~~v~l~~r~~~~   55 (280)
                      +.|.+.+.|- +|+| .++|+.|.++|+.|...|+....
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~   44 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV   44 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh
Confidence            4566777775 4555 56799999999999999987543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.42  E-value=0.15  Score=44.31  Aligned_cols=36  Identities=19%  Similarity=0.229  Sum_probs=30.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEec
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAAR   51 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r   51 (280)
                      ..|++.+|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            3577889999987 7999999999999998 5788865

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.82  E-value=0.87  Score=31.16  Aligned_cols=77  Identities=18%  Similarity=0.321  Sum_probs=50.3

Q ss_pred             CCcEEEEecCC-Chh---------HHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHH
Q 023555           18 DNKVVMVTGAS-SGL---------GREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAI   87 (280)
Q Consensus        18 ~~k~vlItG~~-~gi---------G~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   87 (280)
                      ..|++||.|++ -.|         +.+.+++|.+.|++++++..|++....       -+....++.+-.+    ..+.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVst-------d~d~aD~lYfePl----t~e~v   74 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMT-------DPEMADATYIEPI----HWEVV   74 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGG-------CGGGSSEEECSCC----CHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhc-------ChhhcceeeeecC----CHHHH
Confidence            45889999885 233         567788999999999999998765321       1111234554444    34556


Q ss_pred             HHHHHHHHHHcCCccEEEECCCC
Q 023555           88 ENSVQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        88 ~~~~~~~~~~~g~id~li~~ag~  110 (280)
                      .++++.     .++|.++-..|.
T Consensus        75 ~~Ii~~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          75 RKIIEK-----ERPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHH-----HCCSEEECSSSH
T ss_pred             HHHHHH-----hCcCCeEEEeee
Confidence            666554     389998877654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=86.82  E-value=0.8  Score=34.86  Aligned_cols=76  Identities=13%  Similarity=0.038  Sum_probs=56.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..++++||=.|++.|.   ++..|++.|.+|+.++.+++.++.+.+.....   +.++.++..|+. +.+          
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~---~~~v~~~~~d~~-~~~----------   97 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ---GLKPRLACQDIS-NLN----------   97 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT---TCCCEEECCCGG-GCC----------
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc---Cccceeeccchh-hhc----------
Confidence            4668899999998885   77789999999999999999888776666542   236777888876 211          


Q ss_pred             HHcCCccEEEECCC
Q 023555           96 EAFGRIDALVNNAG  109 (280)
Q Consensus        96 ~~~g~id~li~~ag  109 (280)
                       ..++.|++++.-+
T Consensus        98 -~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 -INRKFDLITCCLD  110 (246)
T ss_dssp             -CSCCEEEEEECTT
T ss_pred             -ccccccccceeee
Confidence             1247899887543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.68  E-value=0.35  Score=38.61  Aligned_cols=33  Identities=21%  Similarity=0.274  Sum_probs=23.4

Q ss_pred             cEEEEecCCCh-h---HHHHHHHHHHhCCeEEEEecC
Q 023555           20 KVVMVTGASSG-L---GREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        20 k~vlItG~~~g-i---G~a~a~~l~~~G~~v~l~~r~   52 (280)
                      |+|+|++|+.| -   +.+++++|.++|++|.+++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            55666665433 3   457999999999999877654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.33  E-value=0.4  Score=37.79  Aligned_cols=33  Identities=15%  Similarity=0.181  Sum_probs=27.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEec
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR   51 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r   51 (280)
                      +.++|+|.|| |-=|.++|..|+++|++|.++-.
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            3456888887 67788999999999999998854

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.06  E-value=0.37  Score=36.37  Aligned_cols=34  Identities=15%  Similarity=0.470  Sum_probs=29.8

Q ss_pred             CcEEEEecCCChhHHH-----HHHHHHHhCCeEEEEecC
Q 023555           19 NKVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        19 ~k~vlItG~~~giG~a-----~a~~l~~~G~~v~l~~r~   52 (280)
                      +|+|.|+|+-||.|+.     +|..|++.|.+|+++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            7899999999999986     577888999999999865

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.89  E-value=1.9  Score=31.75  Aligned_cols=76  Identities=12%  Similarity=0.065  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      ++.+||=.|+++|.   ++..|++.|++|+.++.+++.++.+.+......   .....+..|..+ ..          -.
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~---~~~~~~~~d~~~-l~----------~~   99 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARK-LS----------FE   99 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTS-CC----------SC
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc---cccccccccccc-cc----------cc
Confidence            35678999998876   667888999999999999888887777665542   245667777652 10          01


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .+..|+++..-..
T Consensus       100 ~~~fD~I~~~~~l  112 (226)
T d1ve3a1         100 DKTFDYVIFIDSI  112 (226)
T ss_dssp             TTCEEEEEEESCG
T ss_pred             CcCceEEEEecch
Confidence            1378998877543

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.72  E-value=3.4  Score=29.92  Aligned_cols=74  Identities=14%  Similarity=0.212  Sum_probs=47.5

Q ss_pred             ecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHcCCccEE
Q 023555           25 TGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAFGRIDAL  104 (280)
Q Consensus        25 tG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~l  104 (280)
                      .-+|-|-|-+ .+.+++++.+|+.+||+++..+.+.+.    .  ..++.++..+++ +   +.+.+...  ..+.+|.+
T Consensus        23 vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~----~--~~~~~~~~~~f~-~---~~~~l~~~--~~~~vdgI   89 (182)
T d1wg8a2          23 VDATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL----H--LPGLTVVQGNFR-H---LKRHLAAL--GVERVDGI   89 (182)
T ss_dssp             EETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT----C--CTTEEEEESCGG-G---HHHHHHHT--TCSCEEEE
T ss_pred             EEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc----c--ccceeEeehHHH-H---HHHHHHHc--CCCccCEE
Confidence            3445444444 345566677999999999887655432    1  236888888776 3   33333332  23579999


Q ss_pred             EECCCCC
Q 023555          105 VNNAGVS  111 (280)
Q Consensus       105 i~~ag~~  111 (280)
                      +..-|+.
T Consensus        90 l~DLGvS   96 (182)
T d1wg8a2          90 LADLGVS   96 (182)
T ss_dssp             EEECSCC
T ss_pred             EEEccCC
Confidence            9998875

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.59  E-value=0.39  Score=36.57  Aligned_cols=32  Identities=19%  Similarity=0.293  Sum_probs=27.9

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      |+|.|| |--|..+|..|+++|.+|+++.++..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            678887 67889999999999999999998754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.58  E-value=4.1  Score=28.03  Aligned_cols=87  Identities=11%  Similarity=0.067  Sum_probs=57.0

Q ss_pred             CCcEEEEecCC---ChhHHHHHHHHHHhCCeEEEEecChhHH--HHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHH
Q 023555           18 DNKVVMVTGAS---SGLGREFCLDLAKAGCRIVAAARRVDRL--KSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQ   92 (280)
Q Consensus        18 ~~k~vlItG~~---~giG~a~a~~l~~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   92 (280)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+.......  ..+...+.+. +.  .+..+..=  ...+.+..+++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl-p~--~iD~v~i~--vp~~~~~~~~~   92 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI-PD--KIEVVDLF--VKPKLTMEYVE   92 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC-SS--CCSEEEEC--SCHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc-Cc--cceEEEEE--eCHHHHHHHHH
Confidence            57899999999   6899999999999999999987653211  1111111111 11  22222221  25678888888


Q ss_pred             HHHHHcCCccEEEECCCCC
Q 023555           93 KAWEAFGRIDALVNNAGVS  111 (280)
Q Consensus        93 ~~~~~~g~id~li~~ag~~  111 (280)
                      ++.+.  ++..++...|..
T Consensus        93 e~~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          93 QAIKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHHHH--TCSEEEECTTCC
T ss_pred             HHHHh--CCCEEEEecccc
Confidence            88876  567888877754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.53  E-value=3.6  Score=30.48  Aligned_cols=81  Identities=12%  Similarity=0.073  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      +|.+||-.|+++|--.++..++...+.+|+.++.+++..+.+.+.+....-  .++.++..|..+..           ..
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~--~n~~~~~~d~~~~~-----------~~  141 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI--ENVIFVCGDGYYGV-----------PE  141 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEESCGGGCC-----------GG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcc--cccccccCchHHcc-----------cc
Confidence            477999999888766555544554556899999999888888877755322  24556666655210           11


Q ss_pred             cCCccEEEECCCCC
Q 023555           98 FGRIDALVNNAGVS  111 (280)
Q Consensus        98 ~g~id~li~~ag~~  111 (280)
                      .+..|.++.+++..
T Consensus       142 ~~~fD~I~~~~~~~  155 (213)
T d1dl5a1         142 FSPYDVIFVTVGVD  155 (213)
T ss_dssp             GCCEEEEEECSBBS
T ss_pred             ccchhhhhhhccHH
Confidence            24789999887653

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.41  E-value=1.3  Score=29.86  Aligned_cols=77  Identities=14%  Similarity=0.154  Sum_probs=49.3

Q ss_pred             CCcEEEEecCCC-h---------hHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHH
Q 023555           18 DNKVVMVTGASS-G---------LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAI   87 (280)
Q Consensus        18 ~~k~vlItG~~~-g---------iG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   87 (280)
                      ..|.+||.|++. .         -+.+++++|.+.|++++++..|++...-       -+....++.+-.+    ..+.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst-------d~d~aD~lYfepl----t~e~v   71 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST-------DYDTSDRLYFEPV----TLEDV   71 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT-------STTSSSEEECCCC----SHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc-------ChhhcCceEEccC----CHHHH
Confidence            467899999852 2         3557889999999999999998764321       1112234544444    33455


Q ss_pred             HHHHHHHHHHcCCccEEEECCCC
Q 023555           88 ENSVQKAWEAFGRIDALVNNAGV  110 (280)
Q Consensus        88 ~~~~~~~~~~~g~id~li~~ag~  110 (280)
                      .++++.     .++|.++-.-|.
T Consensus        72 ~~Ii~~-----E~p~~ii~~~GG   89 (121)
T d1a9xa4          72 LEIVRI-----EKPKGVIVQYGG   89 (121)
T ss_dssp             HHHHHH-----HCCSEEECSSST
T ss_pred             HHHHHH-----hCCCEEEeehhh
Confidence            555443     278888777654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=85.30  E-value=3.1  Score=29.64  Aligned_cols=80  Identities=15%  Similarity=0.159  Sum_probs=49.0

Q ss_pred             CCCcEEEEecCC-ChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        17 l~~k~vlItG~~-~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+|+++|=.|++ |.+|.    +++.+|++|+.++.+++..+.+.+.+... +...++....+         ........
T Consensus        40 ~~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~-~~~~~v~~~~~---------d~~~~~~~  105 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRT-GLGARVVALPV---------EVFLPEAK  105 (171)
T ss_dssp             TTCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHH-TCCCEEECSCH---------HHHHHHHH
T ss_pred             cCCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhh-ccccceeeeeh---------hccccccc
Confidence            367777755544 44443    45667999999999999888877776543 22223322221         22333333


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                      ....+.|+++.++-+
T Consensus       106 ~~~~~fD~If~DPPY  120 (171)
T d1ws6a1         106 AQGERFTVAFMAPPY  120 (171)
T ss_dssp             HTTCCEEEEEECCCT
T ss_pred             ccCCccceeEEcccc
Confidence            444579999988743

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.18  E-value=2.6  Score=30.58  Aligned_cols=81  Identities=14%  Similarity=0.127  Sum_probs=56.9

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ...++++||=.|++.|   .++..+++.+.+|+.++-++...+.+.+.+....-...++.+...|+.+.   +.      
T Consensus        49 ~~~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~---~~------  116 (194)
T d1dusa_          49 VVDKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN---VK------  116 (194)
T ss_dssp             CCCTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT---CT------
T ss_pred             CcCCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh---hc------
Confidence            3456889998888777   33455677888999999998888777766654433344678888887621   10      


Q ss_pred             HHHcCCccEEEECCCC
Q 023555           95 WEAFGRIDALVNNAGV  110 (280)
Q Consensus        95 ~~~~g~id~li~~ag~  110 (280)
                         -+..|.++.|..+
T Consensus       117 ---~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 ---DRKYNKIITNPPI  129 (194)
T ss_dssp             ---TSCEEEEEECCCS
T ss_pred             ---cCCceEEEEcccE
Confidence               1379999998654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.10  E-value=3.1  Score=31.01  Aligned_cols=80  Identities=11%  Similarity=0.151  Sum_probs=58.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      -+|.+||..|+++|--.++.-.++  |.+|+.+.++++-.+...+.+.+..  ..++.+...|..+.           ..
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g--~~nv~~~~gd~~~g-----------~~  141 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG--VKNVHVILGDGSKG-----------FP  141 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT--CCSEEEEESCGGGC-----------CG
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC--CceeEEEECccccC-----------Cc
Confidence            347899999999998888777766  5679999999876666666665532  24678888887621           12


Q ss_pred             HcCCccEEEECCCCC
Q 023555           97 AFGRIDALVNNAGVS  111 (280)
Q Consensus        97 ~~g~id~li~~ag~~  111 (280)
                      ..++.|.++.+++..
T Consensus       142 ~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         142 PKAPYDVIIVTAGAP  156 (215)
T ss_dssp             GGCCEEEEEECSBBS
T ss_pred             ccCcceeEEeecccc
Confidence            235899999888764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.90  E-value=0.45  Score=37.13  Aligned_cols=33  Identities=30%  Similarity=0.239  Sum_probs=29.2

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   54 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~   54 (280)
                      .|+|.|| |-.|..+|..|+++|.+|.++.+.++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4788888 48999999999999999999998753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.80  E-value=0.45  Score=37.60  Aligned_cols=32  Identities=19%  Similarity=0.422  Sum_probs=27.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      -|+|.|| |..|..+|..++++|.+|+++.+..
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            3678877 8899999999999999999998754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.56  E-value=0.36  Score=37.36  Aligned_cols=32  Identities=22%  Similarity=0.178  Sum_probs=27.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .|+|.|| |--|.++|..|+++|++|.++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4788888 7789999999999999999998753

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.46  E-value=1  Score=31.89  Aligned_cols=39  Identities=21%  Similarity=0.331  Sum_probs=28.5

Q ss_pred             ccCCCCCcEEEEecCCChhHHHHHHHHHHhCCe-EEEEecCh
Q 023555           13 PWCQLDNKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV   53 (280)
Q Consensus        13 ~~~~l~~k~vlItG~~~giG~a~a~~l~~~G~~-v~l~~r~~   53 (280)
                      +...+.+ +|+|.|| |-.|..+|..+.+.|++ |+++.|.+
T Consensus        40 ~~p~~~~-kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          40 PLPSIRG-AVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCCCCS-EEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             ccccCCC-EEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3434444 5777665 78899999999999986 77887753

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.10  E-value=2.1  Score=33.93  Aligned_cols=77  Identities=17%  Similarity=0.272  Sum_probs=51.4

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..+||+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.+ ...+...++.++..|..+ .+         
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~-~~n~~~~~v~~~~~~~~~-~~---------   95 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIV-KANKLDHVVTIIKGKVEE-VE---------   95 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHH-HHTTCTTTEEEEESCTTT-CC---------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHH-HHhCCccccceEeccHHH-cc---------
Confidence            4589999999998886   4556778887 5899998754 33333333 334445578888888863 21         


Q ss_pred             HHHcCCccEEEECC
Q 023555           95 WEAFGRIDALVNNA  108 (280)
Q Consensus        95 ~~~~g~id~li~~a  108 (280)
                       ....++|+++...
T Consensus        96 -~~~~~~D~ivs~~  108 (316)
T d1oria_          96 -LPVEKVDIIISEW  108 (316)
T ss_dssp             -CSSSCEEEEEECC
T ss_pred             -cccceeEEEeeee
Confidence             1124789998764

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.07  E-value=0.9  Score=32.48  Aligned_cols=37  Identities=16%  Similarity=0.299  Sum_probs=33.8

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      .++|+++++.|..+.+..+.+..+...|+++.+++-.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            4789999999999999999999999999999988753

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=83.83  E-value=1.8  Score=29.04  Aligned_cols=83  Identities=7%  Similarity=0.091  Sum_probs=54.0

Q ss_pred             CCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHH
Q 023555           17 LDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWE   96 (280)
Q Consensus        17 l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (280)
                      |++.++||.--...+...+.+.|.+.|++|... .+.+.+.   +.+.+.   ...+..+...+. + .+--.+++++.+
T Consensus         1 M~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a-~~~~~al---~~~~~~---~~dlvi~D~~mp-~-~~G~e~~~~lr~   71 (123)
T d1dbwa_           1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMH-QSAEAFL---AFAPDV---RNGVLVTDLRMP-D-MSGVELLRNLGD   71 (123)
T ss_dssp             CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-SCHHHHH---HHGGGC---CSEEEEEECCST-T-SCHHHHHHHHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCHHHHH---HHHhhc---CCcEEEEeccCc-c-ccchHHHHHHHh
Confidence            467799999999999999999999999998654 4443332   233221   224555555554 3 334567777776


Q ss_pred             HcCCccEEEECC
Q 023555           97 AFGRIDALVNNA  108 (280)
Q Consensus        97 ~~g~id~li~~a  108 (280)
                      ....+-+++..+
T Consensus        72 ~~~~~~iI~lt~   83 (123)
T d1dbwa_          72 LKINIPSIVITG   83 (123)
T ss_dssp             TTCCCCEEEEEC
T ss_pred             cCCCCeEEEEEe
Confidence            655666666554

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=83.76  E-value=2.3  Score=32.68  Aligned_cols=74  Identities=22%  Similarity=0.241  Sum_probs=51.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      ..+|++||=.|+++|+ .+  ..+++.|++|+.++.++...+.+.+.....   +....+...|+.       ..     
T Consensus       118 ~~~g~~VLDiGcGsG~-l~--i~aa~~g~~V~gvDis~~av~~A~~na~~n---~~~~~~~~~d~~-------~~-----  179 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV-LA--IAAEKLGGKALGVDIDPMVLPQAEANAKRN---GVRPRFLEGSLE-------AA-----  179 (254)
T ss_dssp             CCTTCEEEEETCTTSH-HH--HHHHHTTCEEEEEESCGGGHHHHHHHHHHT---TCCCEEEESCHH-------HH-----
T ss_pred             cCccCEEEEcccchhH-HH--HHHHhcCCEEEEEECChHHHHHHHHHHHHc---CCceeEEecccc-------cc-----
Confidence            5679999999999886 23  356778999999999999888877766542   234445555432       11     


Q ss_pred             HHcCCccEEEEC
Q 023555           96 EAFGRIDALVNN  107 (280)
Q Consensus        96 ~~~g~id~li~~  107 (280)
                      ...++.|+++.|
T Consensus       180 ~~~~~fD~V~an  191 (254)
T d2nxca1         180 LPFGPFDLLVAN  191 (254)
T ss_dssp             GGGCCEEEEEEE
T ss_pred             ccccccchhhhc
Confidence            123589999876

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=83.48  E-value=0.37  Score=35.24  Aligned_cols=35  Identities=14%  Similarity=0.147  Sum_probs=30.1

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      +++.++|.|| |-.|.+.|..+++.|.+|+++.+..
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            4678999998 5689999999999999999998754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=83.26  E-value=0.52  Score=35.49  Aligned_cols=32  Identities=25%  Similarity=0.253  Sum_probs=26.9

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCC-eEEEEecCh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV   53 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~   53 (280)
                      .|+|.|| |--|.++|..|+++|. +|.++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4788887 7888999999999997 699998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=83.26  E-value=0.4  Score=37.21  Aligned_cols=33  Identities=21%  Similarity=0.346  Sum_probs=27.9

Q ss_pred             cEEEEecCCChhHHHH-----HHHHHHhCCeEEEEecCh
Q 023555           20 KVVMVTGASSGLGREF-----CLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        20 k~vlItG~~~giG~a~-----a~~l~~~G~~v~l~~r~~   53 (280)
                      |+|.|+| =||.|+.+     |..|++.|.+|.++|.+.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            6788998 88888875     558899999999999875

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=83.15  E-value=3.6  Score=27.23  Aligned_cols=81  Identities=12%  Similarity=0.171  Sum_probs=52.8

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHHc
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEAF   98 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (280)
                      +|+|||.--..-+-..+...|.+.|++|..+....+.++.+    .+.   ...+..+...+. +... -.++.++.+..
T Consensus         2 ~krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l----~~~---~~dlillD~~mp-~~~G-~~~~~~~r~~~   72 (121)
T d1mvoa_           2 NKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKA----ETE---KPDLIVLDVMLP-KLDG-IEVCKQLRQQK   72 (121)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHH----HHH---CCSEEEEESSCS-SSCH-HHHHHHHHHTT
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH----hcc---cccEEEeccccc-CCCC-chhhhhhhccC
Confidence            47899999999999999999999999988655544444333    222   225666666665 3333 34556666655


Q ss_pred             CCccEEEECC
Q 023555           99 GRIDALVNNA  108 (280)
Q Consensus        99 g~id~li~~a  108 (280)
                      ..+.+++..+
T Consensus        73 ~~~~ii~lt~   82 (121)
T d1mvoa_          73 LMFPILMLTA   82 (121)
T ss_dssp             CCCCEEEEEC
T ss_pred             CCCEEEEEEe
Confidence            5555655444

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.07  E-value=0.49  Score=37.50  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=27.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .++|.|| |--|.++|+.|++.|.+|.++.++.
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4788887 7889999999999999999998754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.06  E-value=4  Score=28.61  Aligned_cols=83  Identities=16%  Similarity=0.194  Sum_probs=50.4

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccC--CCHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVS--ANGAAIENSVQKAW   95 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~   95 (280)
                      +|+++.|.+.+||.|--++..+.+.|.++.  .-+++..+++.+.+    +.. ...-..+|++  .+.+...+.++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~l----p~~-~~~~NPlD~~~~~~~~~~~~~l~~~~   74 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFL----PPM-AAVKNPVDMIASARGEDYYRTAKLLL   74 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHS----CTT-CEESSEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhC----CCc-ccCCCcccccCCCCHHHHHHHHHHHH
Confidence            588899999999999999999999996653  33443333333333    211 1112233432  24466666666655


Q ss_pred             HHcCCccEEEECC
Q 023555           96 EAFGRIDALVNNA  108 (280)
Q Consensus        96 ~~~g~id~li~~a  108 (280)
                      +. +.+|.++...
T Consensus        75 ~d-~~vd~v~v~~   86 (163)
T d2csua3          75 QD-PNVDMLIAIC   86 (163)
T ss_dssp             HS-TTCSEEEEEE
T ss_pred             cC-CCcCEEEEee
Confidence            43 5788765443

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.96  E-value=3.8  Score=29.66  Aligned_cols=78  Identities=14%  Similarity=0.088  Sum_probs=53.9

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .+++++||=.|++.|.   .+..|+++|++|+.++.+++.++.+.+...+..-  ..+.+...|+.+..      .    
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~d~~~~~------~----   92 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL--DNLQTDLVDLNTLT------F----   92 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--TTEEEEECCTTTCC------C----
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc--cchhhhheeccccc------c----
Confidence            4567789999986553   5668889999999999999888877666554321  24666777776211      1    


Q ss_pred             HHcCCccEEEECCCC
Q 023555           96 EAFGRIDALVNNAGV  110 (280)
Q Consensus        96 ~~~g~id~li~~ag~  110 (280)
                        -+..|+++.+.-+
T Consensus        93 --~~~fD~I~~~~~~  105 (198)
T d2i6ga1          93 --DGEYDFILSTVVM  105 (198)
T ss_dssp             --CCCEEEEEEESCG
T ss_pred             --cccccEEEEeeee
Confidence              1368999876543

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.88  E-value=0.51  Score=35.46  Aligned_cols=34  Identities=18%  Similarity=0.419  Sum_probs=28.9

Q ss_pred             cEEEEecCCChhHHH-----HHHHHHHhCCeEEEEecCh
Q 023555           20 KVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        20 k~vlItG~~~giG~a-----~a~~l~~~G~~v~l~~r~~   53 (280)
                      |+|.|+++-||.|+.     +|..|+++|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999999875     4678889999999998653

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.70  E-value=0.26  Score=34.79  Aligned_cols=37  Identities=22%  Similarity=0.147  Sum_probs=27.0

Q ss_pred             CCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHH
Q 023555           27 ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   63 (280)
Q Consensus        27 ~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~   63 (280)
                      |+|.+|+++++.|.+.+..+.+.+|+.++++++.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            5688999999988765444568899999988876654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.43  E-value=1.1  Score=34.35  Aligned_cols=36  Identities=19%  Similarity=0.317  Sum_probs=30.1

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHH-hCCeEEEEec
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAAR   51 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~r   51 (280)
                      .+++||+++|-|- |.+|..+|+.|++ .|++|+.+..
T Consensus        28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            3589999999998 6799999999986 5998876643

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.29  E-value=0.96  Score=33.70  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=32.3

Q ss_pred             CCCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           15 CQLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        15 ~~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      .+++||+|+|.|++ --|..+|..+++.+..++.+.|..
T Consensus        28 ~~~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCC-ccHHHHHHHHHhhhcccccccccc
Confidence            46899999999885 458899999999999988887753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=81.72  E-value=4.7  Score=30.16  Aligned_cols=75  Identities=13%  Similarity=-0.009  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHHHH
Q 023555           18 DNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAWEA   97 (280)
Q Consensus        18 ~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (280)
                      .|.+||-.|+++|--.   ..|++.+.+|+.++++++..+.+.+.+..    ..++.++..|.....           ..
T Consensus        70 ~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~~----~~nv~~~~~d~~~g~-----------~~  131 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLSY----YNNIKLILGDGTLGY-----------EE  131 (224)
T ss_dssp             TTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHTT----CSSEEEEESCGGGCC-----------GG
T ss_pred             ccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHhc----ccccccccCchhhcc-----------hh
Confidence            4778999999888533   34677778999999998877766554432    236778888765211           11


Q ss_pred             cCCccEEEECCCC
Q 023555           98 FGRIDALVNNAGV  110 (280)
Q Consensus        98 ~g~id~li~~ag~  110 (280)
                      .++.|.++.+++.
T Consensus       132 ~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         132 EKPYDRVVVWATA  144 (224)
T ss_dssp             GCCEEEEEESSBB
T ss_pred             hhhHHHHHhhcch
Confidence            3578999988765

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.63  E-value=1.1  Score=34.15  Aligned_cols=34  Identities=24%  Similarity=0.375  Sum_probs=29.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHH-hCCeEEEEe
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAK-AGCRIVAAA   50 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~-~G~~v~l~~   50 (280)
                      ++++|+++|-| .|.+|+.+|+.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            78999999986 69999999999975 599988665

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.30  E-value=0.7  Score=35.35  Aligned_cols=37  Identities=19%  Similarity=0.148  Sum_probs=30.3

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHH
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   58 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~   58 (280)
                      -|+|.|| |.-|..+|..++++|.+|+++.+++.....
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k   42 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRK   42 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence            4777777 778889999999999999999998654443

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.08  E-value=0.73  Score=36.47  Aligned_cols=30  Identities=27%  Similarity=0.290  Sum_probs=25.7

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecC
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      |+|.|| |--|.++|..|+++|.+|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            677777 677999999999999999999764

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=81.07  E-value=7.6  Score=27.79  Aligned_cols=83  Identities=14%  Similarity=0.243  Sum_probs=56.4

Q ss_pred             CCCCcEEE-EecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHH
Q 023555           16 QLDNKVVM-VTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQK   93 (280)
Q Consensus        16 ~l~~k~vl-ItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (280)
                      .++|+++| +..|+|.+|.+    .+.+|+ .|++++.+.+..+.+.+.+... +...++.+...|+.       +.++.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~-~~~~~~~i~~~D~~-------~~l~~  106 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAIT-KEPEKFEVRKMDAN-------RALEQ  106 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEESCHH-------HHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhh-hcccccccccccch-------hhhhh
Confidence            46788888 45556667775    445888 4999999998888777776543 23446777777654       34455


Q ss_pred             HHHHcCCccEEEECCCC
Q 023555           94 AWEAFGRIDALVNNAGV  110 (280)
Q Consensus        94 ~~~~~g~id~li~~ag~  110 (280)
                      ......+.|+++..+.+
T Consensus       107 ~~~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         107 FYEEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HHHTTCCEEEEEECCCG
T ss_pred             hcccCCCcceEEechhh
Confidence            44444578999988743

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=80.78  E-value=1.2  Score=29.60  Aligned_cols=34  Identities=21%  Similarity=0.155  Sum_probs=27.6

Q ss_pred             CcEEEEecCCChhHHHHHHHHHHh---CCeEEEEecCh
Q 023555           19 NKVVMVTGASSGLGREFCLDLAKA---GCRIVAAARRV   53 (280)
Q Consensus        19 ~k~vlItG~~~giG~a~a~~l~~~---G~~v~l~~r~~   53 (280)
                      .|.++|.|| |.+|..+|..|++.   |.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478889888 89999999876654   88899998854

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.52  E-value=1.3  Score=29.69  Aligned_cols=33  Identities=21%  Similarity=0.363  Sum_probs=29.3

Q ss_pred             cEEEEecCC---ChhHHHHHHHHHHhCCeEEEEecC
Q 023555           20 KVVMVTGAS---SGLGREFCLDLAKAGCRIVAAARR   52 (280)
Q Consensus        20 k~vlItG~~---~giG~a~a~~l~~~G~~v~l~~r~   52 (280)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            789999998   668999999999999999888654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.36  E-value=4  Score=32.32  Aligned_cols=78  Identities=15%  Similarity=0.288  Sum_probs=51.6

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCC-eEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKA   94 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (280)
                      ..+||+||-.|++.|+   ++..+++.|+ +|+.++.++ .++. .++.....+...++.++..|+. +.+         
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~-a~~~~~~~~~~~~i~~i~~~~~-~l~---------  100 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEM-AKELVELNGFSDKITLLRGKLE-DVH---------  100 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHH-HHHHHHHTTCTTTEEEEESCTT-TSC---------
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHH-HHHHHHHhCccccceEEEeehh-hcc---------
Confidence            3689999999998875   4556778898 588888775 3333 3333344444557888888876 321         


Q ss_pred             HHHcCCccEEEECCC
Q 023555           95 WEAFGRIDALVNNAG  109 (280)
Q Consensus        95 ~~~~g~id~li~~ag  109 (280)
                       -...+.|+++...-
T Consensus       101 -~~~~~~D~i~se~~  114 (328)
T d1g6q1_         101 -LPFPKVDIIISEWM  114 (328)
T ss_dssp             -CSSSCEEEEEECCC
T ss_pred             -CcccceeEEEEEec
Confidence             01137899988653

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=80.26  E-value=4.3  Score=29.09  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=54.2

Q ss_pred             CCCCcEEEEecCCChhHHHHHHHHHHhCCeEEEEecChhHHHHHHHHHHhhcCCCcceEEEEeccCCCHHHHHHHHHHHH
Q 023555           16 QLDNKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKQSGSSVRAMAVELDVSANGAAIENSVQKAW   95 (280)
Q Consensus        16 ~l~~k~vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (280)
                      .-+|.+||=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.+... +-..++.++.+|.. +      .    .
T Consensus        31 ~~~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~-gl~~~v~~~~gda~-~------~----~   95 (186)
T d1l3ia_          31 PGKNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH-GLGDNVTLMEGDAP-E------A----L   95 (186)
T ss_dssp             CCTTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT-TCCTTEEEEESCHH-H------H----H
T ss_pred             CCCCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHc-CCCcceEEEECchh-h------c----c
Confidence            345888888887766   334456677889999999999998888887653 33346777777643 1      1    1


Q ss_pred             HHcCCccEEEECCC
Q 023555           96 EAFGRIDALVNNAG  109 (280)
Q Consensus        96 ~~~g~id~li~~ag  109 (280)
                      ......|.++.+.+
T Consensus        96 ~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          96 CKIPDIDIAVVGGS  109 (186)
T ss_dssp             TTSCCEEEEEESCC
T ss_pred             cccCCcCEEEEeCc
Confidence            22357899987643

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.24  E-value=0.24  Score=37.51  Aligned_cols=27  Identities=22%  Similarity=0.251  Sum_probs=22.8

Q ss_pred             EEEEecCCChhHHHHHHHHHHhCCeEEE
Q 023555           21 VVMVTGASSGLGREFCLDLAKAGCRIVA   48 (280)
Q Consensus        21 ~vlItG~~~giG~a~a~~l~~~G~~v~l   48 (280)
                      +|+|.|| |-+|.++|..|+++|.+|++
T Consensus         2 kV~VIGa-Gi~GlstA~~L~~~G~~v~v   28 (246)
T d1kifa1           2 RVVVIGA-GVIGLSTALCIHERYHSVLQ   28 (246)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHTTTSS
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCCceE
Confidence            4788887 89999999999999987543

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=80.21  E-value=0.74  Score=36.60  Aligned_cols=31  Identities=19%  Similarity=0.452  Sum_probs=27.0

Q ss_pred             EEEecCCChhHHHHHHHHHHhCCeEEEEecCh
Q 023555           22 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   53 (280)
Q Consensus        22 vlItG~~~giG~a~a~~l~~~G~~v~l~~r~~   53 (280)
                      |+|.|+ |.-|..+|..++++|++|+++.+.+
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 7889999999999999999998754