Query 023558
Match_columns 280
No_of_seqs 162 out of 384
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 08:53:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we1_A Heme oxygenase 1; oxido 100.0 1E-36 3.6E-41 273.2 13.2 166 87-278 3-207 (240)
2 1n45_A Heme oxygenase 1, HO-1; 100.0 5.2E-37 1.8E-41 273.5 10.8 168 85-278 9-218 (233)
3 1j02_A Heme oxygenase 1; alpha 100.0 8.9E-37 3.1E-41 278.7 11.8 168 85-278 9-218 (267)
4 2q32_A Heme oxygenase 2, HO-2; 100.0 1.3E-36 4.4E-41 277.1 11.2 170 84-279 28-239 (264)
5 1wzd_A Heme oxygenase; electro 100.0 1.7E-36 5.8E-41 265.9 10.3 167 86-278 5-212 (215)
6 1wov_A Heme oxygenase 2; HOMO 100.0 4.2E-36 1.4E-40 271.0 9.2 166 87-278 2-210 (250)
7 1sk7_A Hypothetical protein PA 99.8 1.1E-20 3.6E-25 164.5 11.1 125 140-278 36-197 (198)
8 1j77_A HEMO, heme oxygenase; p 99.8 3.4E-20 1.2E-24 162.9 10.9 123 140-279 33-193 (209)
9 3dde_A TENA/THI-4 protein, dom 99.4 1E-12 3.5E-17 115.3 10.8 138 139-278 31-218 (239)
10 2qzc_A Transcriptional activat 70.5 9.4 0.00032 32.3 6.4 91 139-230 31-132 (214)
11 2qcx_A Transcriptional activat 65.9 53 0.0018 28.9 10.6 92 139-230 54-157 (263)
12 4fn6_A Thiaminase-2, thiaminas 62.6 8 0.00027 33.3 4.5 87 140-230 28-132 (229)
13 2gm8_A TENA homolog/THI-4 thia 61.0 9.7 0.00033 32.5 4.7 89 140-228 36-136 (221)
14 1z72_A Transcriptional regulat 60.6 11 0.00037 32.1 4.9 90 139-228 40-141 (225)
15 1udd_A Transcriptional regulat 58.6 12 0.00042 31.9 5.0 88 140-228 30-129 (226)
16 3ibx_A TENA, HP1287, putative 55.6 40 0.0014 28.6 7.7 86 140-229 32-133 (221)
17 1rtw_A Transcriptional activat 54.8 96 0.0033 26.1 12.2 86 139-229 26-122 (220)
18 2f2g_A SEED maturation protein 53.7 58 0.002 27.3 8.4 91 139-230 30-134 (221)
19 3mvu_A TENA family transcripti 49.8 24 0.00083 30.2 5.4 87 140-230 34-136 (226)
20 3no6_A Transcriptional activat 48.9 25 0.00086 30.9 5.5 81 139-223 46-142 (248)
21 1rcw_A CT610, CADD; iron, DI-i 44.2 36 0.0012 28.4 5.5 94 139-233 30-139 (231)
22 1wwm_A Hypothetical protein TT 40.3 47 0.0016 27.6 5.6 80 137-223 22-106 (190)
23 4g5a_A Uncharacterized protein 32.2 4.5 0.00015 31.7 -1.8 18 228-245 65-82 (99)
24 2a2m_A Hypothetical protein BT 31.7 41 0.0014 29.7 4.0 82 139-223 74-163 (258)
25 3fvq_A Fe(3+) IONS import ATP- 31.4 17 0.00059 34.0 1.6 38 230-267 129-185 (359)
26 3tif_A Uncharacterized ABC tra 31.4 11 0.00037 32.5 0.2 31 234-264 140-189 (235)
27 1v43_A Sugar-binding transport 30.0 16 0.00055 34.2 1.1 37 230-266 132-187 (372)
28 1b0u_A Histidine permease; ABC 29.3 16 0.00053 32.1 0.9 35 230-264 143-197 (262)
29 3d31_A Sulfate/molybdate ABC t 28.2 15 0.00053 34.0 0.7 37 230-266 118-173 (348)
30 1g29_1 MALK, maltose transport 28.2 17 0.00059 33.9 1.0 37 230-266 130-185 (372)
31 1g6h_A High-affinity branched- 28.1 14 0.00049 32.1 0.4 35 230-264 144-197 (257)
32 3rlf_A Maltose/maltodextrin im 28.0 17 0.0006 34.3 1.0 37 230-266 124-179 (381)
33 1z47_A CYSA, putative ABC-tran 28.0 18 0.0006 33.8 1.0 37 230-266 136-191 (355)
34 2yyz_A Sugar ABC transporter, 27.9 18 0.00062 33.7 1.1 37 230-266 124-179 (359)
35 1vzm_A Osteocalcin; calcium-bi 27.2 42 0.0014 23.3 2.5 26 214-239 10-42 (45)
36 3gfo_A Cobalt import ATP-bindi 26.7 16 0.00054 32.6 0.4 35 230-264 134-187 (275)
37 3tui_C Methionine import ATP-b 26.4 14 0.00048 34.8 0.1 35 230-264 154-207 (366)
38 1oxx_K GLCV, glucose, ABC tran 25.2 14 0.00048 34.2 -0.2 37 230-266 131-186 (353)
39 2it1_A 362AA long hypothetical 24.6 17 0.00057 34.0 0.2 37 230-266 124-179 (362)
40 2onk_A Molybdate/tungstate ABC 24.3 16 0.00055 31.7 -0.0 35 230-264 117-170 (240)
41 2pcj_A ABC transporter, lipopr 24.0 15 0.00051 31.3 -0.3 33 231-263 132-183 (224)
42 2ihy_A ABC transporter, ATP-bi 23.5 20 0.00067 31.9 0.4 34 230-263 152-204 (279)
43 2olj_A Amino acid ABC transpor 22.3 21 0.00072 31.5 0.4 35 230-264 150-203 (263)
44 2nq2_C Hypothetical ABC transp 22.0 22 0.00074 31.0 0.4 33 231-263 120-171 (253)
45 3rm5_A Hydroxymethylpyrimidine 21.8 4E+02 0.014 25.7 9.4 80 140-223 359-454 (550)
46 2yz2_A Putative ABC transporte 21.4 24 0.00082 30.9 0.5 33 231-263 130-181 (266)
47 1ji0_A ABC transporter; ATP bi 21.1 20 0.0007 30.8 0.0 35 230-264 130-183 (240)
48 1vpl_A ABC transporter, ATP-bi 21.0 26 0.0009 30.7 0.7 34 231-264 138-190 (256)
49 2d2e_A SUFC protein; ABC-ATPas 20.9 26 0.00088 30.3 0.6 33 231-263 134-186 (250)
50 3t5s_A Gilaa.00834.A, macropha 20.9 72 0.0025 25.5 3.3 39 229-267 1-49 (135)
51 3mb2_B 4-oxalocrotonate tautom 20.8 73 0.0025 24.1 3.0 19 250-268 12-30 (72)
No 1
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=100.00 E-value=1e-36 Score=273.23 Aligned_cols=166 Identities=14% Similarity=0.234 Sum_probs=148.0
Q ss_pred cchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHHHH
Q 023558 87 KGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERI 166 (280)
Q Consensus 87 kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~a 166 (280)
.+|.+.||...+++|+.-... .--+.+.+|.+++++|+++|.++|+||.+||++
T Consensus 3 ~~l~~~Lr~~T~~~H~~~e~~--------------------------~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~ 56 (240)
T 1we1_A 3 VNLASQLREGTKKSHSMAENV--------------------------GFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEE 56 (240)
T ss_dssp CCHHHHHHHHTHHHHHHHHTS--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHCc--------------------------HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999753210 000124589999999999999999999999999
Q ss_pred HHhcCC-cccccccCCCccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcccch
Q 023558 167 VDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQ 244 (280)
Q Consensus 167 v~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLSGGQ 244 (280)
++++.+ |.++.|++|+|.|+++|++||++|+|+++ +.+.|++++..||+||+++++++|.+||||+||||+|||||||
T Consensus 57 ~~~~~~~p~l~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llg~~Yv~y~g~lsGGq 136 (240)
T 1we1_A 57 MAKFKDHPILSHIYFPELNRKQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVAATAPELLVAHSYTRYLGDLSGGQ 136 (240)
T ss_dssp HHHTTTSTTGGGGCCTTSCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHhcccCchhHhhhhHhhhhHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHHH
Confidence 999865 88899999999999999999999999884 4678899999999999999999999999999999999999999
Q ss_pred hhhcc-------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558 245 VIERQ-------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278 (280)
Q Consensus 245 iI~r~-------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~ 278 (280)
||+++ +||++++++||+||+.+|++|++||+.|-
T Consensus 137 ~i~~~~~~~l~L~~~g~~fy~f~~~~d~~~~k~~fr~~Ld~l~l~~~e~~~ii~eA~~aF~~n~~if~eL~ 207 (240)
T 1we1_A 137 ILKKIAQNAMNLHDGGTAFYEFADIDDEKAFKNTYRQAMNDLPIDQATAERIVDEANDAFAMNMKMFNELE 207 (240)
T ss_dssp HHHHHHHHHHTCSSSSCGGGCCTTCSSHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHhcCcCcccchhcccCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99776 79999999999999999999999999874
No 2
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=100.00 E-value=5.2e-37 Score=273.53 Aligned_cols=168 Identities=15% Similarity=0.264 Sum_probs=149.6
Q ss_pred CccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHH
Q 023558 85 ESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIE 164 (280)
Q Consensus 85 e~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE 164 (280)
-.++|.++||...+++|++-.+. .-...+.+|.+++++|++||.++|+||.+||
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~e~~--------------------------~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE 62 (233)
T 1n45_A 9 MPQDLSEALKEATKEVHTQAENA--------------------------EFMRNFQKGQVTRDGFKLVMASLYHIYVALE 62 (233)
T ss_dssp -CCSHHHHHHHHTHHHHHHHHHS--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999999999863210 1113357899999999999999999999999
Q ss_pred HHHHhcCC-cccccccCC-CccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcc
Q 023558 165 RIVDDSND-VAYAYFRKT-GLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVA 241 (280)
Q Consensus 165 ~av~~~~d-p~~a~f~~p-eL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLS 241 (280)
++++++.+ |.++.+++| +|.|+++|++||++|+|+++ ..+.|++++..||+||++++.++|.+|+||+||+|+||+|
T Consensus 63 ~~~~~~~~~p~~~~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~~~~P~~l~ah~Yv~YeG~~~ 142 (233)
T 1n45_A 63 EEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLS 142 (233)
T ss_dssp HHHHHHTTSTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHhcccCchhhhhcCHhhcccHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 99999875 778889999 89999999999999999874 4678899999999999999999999999999999999999
Q ss_pred cchhhhcc---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558 242 GGQVIERQ---------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278 (280)
Q Consensus 242 GGQiI~r~---------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~ 278 (280)
|||||+++ +||++++++||+||+.+|++|++||+.|-
T Consensus 143 GGq~i~~~~~~~l~L~~~~~g~~f~~f~~~~~~~~~k~~fr~~Ld~~~l~~~e~~~ii~eA~~aF~~n~~i~~el~ 218 (233)
T 1n45_A 143 GGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQ 218 (233)
T ss_dssp HHHHHHHHHHHHHCCCSCSCSCGGGCCTTCSCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCcceeeccCCcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999766 79999999999999999999999999874
No 3
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*
Probab=100.00 E-value=8.9e-37 Score=278.74 Aligned_cols=168 Identities=16% Similarity=0.257 Sum_probs=149.4
Q ss_pred CccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHH
Q 023558 85 ESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIE 164 (280)
Q Consensus 85 e~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE 164 (280)
-.++|.++||...+++|++-.+. .-...+.+|.+++++|++||.++|+||.+||
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~E~~--------------------------~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE 62 (267)
T 1j02_A 9 MSQDLSEALKEATKEVHIRAENS--------------------------EFMRNFQKGQVSREGFKLVMASLYHIYTALE 62 (267)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTS--------------------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999999999864311 0112346889999999999999999999999
Q ss_pred HHHHhcCC-cccccccCC-CccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcc
Q 023558 165 RIVDDSND-VAYAYFRKT-GLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVA 241 (280)
Q Consensus 165 ~av~~~~d-p~~a~f~~p-eL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLS 241 (280)
++++++.+ |.++.+++| +|.|+++|++||+||+|+++ +.+.|++++..||+||++++.++|.+||||+||+|+||||
T Consensus 63 ~~l~~~~~~p~l~~~~~peel~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y~g~ls 142 (267)
T 1j02_A 63 EEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLS 142 (267)
T ss_dssp HHHHHTTTCTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTT
T ss_pred HHHHHcccCcHHHHhcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 99999876 788889999 89999999999999999884 4778899999999999999999999999999999999999
Q ss_pred cchhhhcc---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558 242 GGQVIERQ---------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278 (280)
Q Consensus 242 GGQiI~r~---------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~ 278 (280)
|||||+++ +||++++++||+||+.+|++|++||+.|-
T Consensus 143 GGqii~k~l~k~lgL~~~~~gl~Fy~f~g~~d~~~~k~~fr~~Ld~l~ld~ee~~~iI~eA~~aF~ln~~if~eL~ 218 (267)
T 1j02_A 143 GGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQ 218 (267)
T ss_dssp HHHHHHHHHHHHHTCCTTCTTCGGGCCTTCSCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCcceeeccCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999766 78999999999999999999999999874
No 4
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=100.00 E-value=1.3e-36 Score=277.07 Aligned_cols=170 Identities=17% Similarity=0.266 Sum_probs=150.6
Q ss_pred CCccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHH
Q 023558 84 GESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTI 163 (280)
Q Consensus 84 ge~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~AL 163 (280)
...++|.++||...+++|++--+. .-...+.+|.+++++|++||.++|+||.+|
T Consensus 28 ~~~~~~~~~Lr~~T~~~H~~~e~~--------------------------~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~L 81 (264)
T 2q32_A 28 MRMADLSELLKEGTKEAHDRAENT--------------------------QFVKDFLKGNIKKELFKLATTALYFTYSAL 81 (264)
T ss_dssp -CTTSHHHHHHHHSHHHHHHHHTC--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 344689999999999999864210 001234689999999999999999999999
Q ss_pred HHHHHhcCC-cccccccCC-CccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhc
Q 023558 164 ERIVDDSND-VAYAYFRKT-GLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHV 240 (280)
Q Consensus 164 E~av~~~~d-p~~a~f~~p-eL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDL 240 (280)
|++++++.+ |.++.+++| +|.|+++|++||+||+|+++ ..+.|++++..||+||+++++++|.+||||+||||+|||
T Consensus 82 E~~l~~~~~~p~l~~~~~~~el~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y~g~l 161 (264)
T 2q32_A 82 EEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDL 161 (264)
T ss_dssp HHHHHHTTTCTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHcccChHhHhhcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 999999876 788889999 79999999999999999884 467889999999999999999999999999999999999
Q ss_pred ccchhhhcc---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023558 241 AGGQVIERQ---------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLIIL 279 (280)
Q Consensus 241 SGGQiI~r~---------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~~ 279 (280)
||||||+++ +||++++++||+||+.+|++|++||+.|-.
T Consensus 162 sGGqii~k~l~k~lgL~~~~~g~~Fy~f~g~~d~~~~k~~fr~~Ld~l~ld~ee~~~iI~eA~~aF~ln~~if~eL~~ 239 (264)
T 2q32_A 162 SGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQ 239 (264)
T ss_dssp HHHHHHHHHHHHHHTCCTTCTTCGGGCCTTCSCHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHhcCCCCCCccceeeccCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998776 789999999999999999999999998853
No 5
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=100.00 E-value=1.7e-36 Score=265.94 Aligned_cols=167 Identities=22% Similarity=0.327 Sum_probs=148.3
Q ss_pred ccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHHH
Q 023558 86 SKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIER 165 (280)
Q Consensus 86 ~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~ 165 (280)
+++|.+.||...+++|++-.+.. --..+.+|.+++++|++||.++|+||.+||+
T Consensus 5 ~~~l~~~Lr~~T~~~H~~~e~~~--------------------------~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~ 58 (215)
T 1wzd_A 5 TAGLAVELKQSTAQAHEKAEHST--------------------------FMSDLLKGRLGVAEFTRLQEQAWLFYTALEQ 58 (215)
T ss_dssp --CHHHHHHHHTHHHHHHHHTCH--------------------------HHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHccH--------------------------HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35899999999999998654210 0022568999999999999999999999999
Q ss_pred HHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC-C-CCCCCCchHHHHHHHHHHHHhcC-cchhHhHHHHHHhhhcc
Q 023558 166 IVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG-I-IIPEPSTPGVSYAKYLEELAEKS-APLFLSHFYNIYFSHVA 241 (280)
Q Consensus 166 av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~-~-~~p~P~pat~~Yv~rL~ela~~~-P~lLVAHaYtRYLGDLS 241 (280)
+++++.+ |.++.|++|+|.|+++|++||++|.|++ + +.+.|+|++..||+||++++.++ |.+||||+||+|+||+|
T Consensus 59 ~~~~~~~~p~~~~~~~~el~R~~~l~~DL~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~~~~~p~~~lg~~Yv~YeG~~~ 138 (215)
T 1wzd_A 59 AVDAVRASGFAESLLDPALNRAEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLS 138 (215)
T ss_dssp HHHHHHHHTSSTTTSCGGGCCHHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcccCchhhhhccchhccHHHHHHHHHHHcCCcchhhcCCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Confidence 9999875 8889999999999999999999999986 3 36789999999999999999989 99999999999999999
Q ss_pred cchhhhcc-------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558 242 GGQVIERQ-------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278 (280)
Q Consensus 242 GGQiI~r~-------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~ 278 (280)
|||||+++ +||++++++||+||+.+|++|++||+.|-
T Consensus 139 GGq~i~~~~~~~l~l~~~g~~f~~~~~~~~~~~~~~~fr~~Ld~~~~~~~~~~~ii~eA~~aF~~~~~i~~el~ 212 (215)
T 1wzd_A 139 GGQVIARMMQRHYGVDPEALGFYHFEGIAKLKVYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQVFADLG 212 (215)
T ss_dssp HHHHHHHHHHHHHCCCGGGCGGGCCTTCSCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCcCcccceeeecCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999877 88999999999999999999999999874
No 6
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=100.00 E-value=4.2e-36 Score=271.03 Aligned_cols=166 Identities=16% Similarity=0.280 Sum_probs=147.5
Q ss_pred cchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHHHH
Q 023558 87 KGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERI 166 (280)
Q Consensus 87 kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~a 166 (280)
.+|.+.||.....+|+.-.+. .--+.+.+|.+|+++|+++|.++|+||.+||++
T Consensus 2 ~~l~~~Lr~~T~~~H~~~e~~--------------------------~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~ 55 (250)
T 1wov_A 2 TNLAQKLRYGTQQSHTLAENT--------------------------AYMKCFLKGIVEREPFRQLLANLYYLYSALEAA 55 (250)
T ss_dssp CCHHHHHHHHTHHHHHHHHTS--------------------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHch--------------------------HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999999999753210 001225789999999999999999999999999
Q ss_pred HHhcCC-cccccccCCCccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcccch
Q 023558 167 VDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQ 244 (280)
Q Consensus 167 v~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLSGGQ 244 (280)
++++.+ |.++.|++|+|.|+++|++||++|+|+++ +.+.|++++..||+||++++.++|.+||||+||+|+||+||||
T Consensus 56 ~~~~~~~p~l~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llgh~Yv~y~g~lsGGq 135 (250)
T 1wov_A 56 LRQHRDNEIISAIYFPELNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLSGGQ 135 (250)
T ss_dssp HHHTTTSHHHHHHCCGGGCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTHHH
T ss_pred HHHhccChhhhhhccHhhhhHHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHHH
Confidence 999875 78889999999999999999999999874 4678899999999999999999999999999999999999999
Q ss_pred hhhcc-----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558 245 VIERQ-----------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278 (280)
Q Consensus 245 iI~r~-----------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~ 278 (280)
||+++ +||++++++||+||+.+|++|++||+.|-
T Consensus 136 ~i~~~l~k~l~L~~~~g~~fy~f~~~~~~~d~~~~k~~fr~~Ld~l~l~~~e~~~ii~eA~~aF~ln~~if~eL~ 210 (250)
T 1wov_A 136 SLKNIIRSALQLPEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSLPLDEATINRIVEEANYAFSLNREVMHDLE 210 (250)
T ss_dssp HHHHHHHHHTTCCTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHhcCCCCcccceeeccCCccccccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99877 78999999999999999999999999763
No 7
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=99.83 E-value=1.1e-20 Score=164.50 Aligned_cols=125 Identities=14% Similarity=0.192 Sum_probs=103.3
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcCCCCCCCCchHHHHHHHHH
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLE 218 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~~~p~P~pat~~Yv~rL~ 218 (280)
.++.+++++|++||.++|+||.+||.+++.+.. +.+. ..+++.|.+.|++||++|.+. +....|.|++
T Consensus 36 ~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~--~~~e~~R~~~L~~DL~~lg~~-~~~~i~~p~~-------- 104 (198)
T 1sk7_A 36 KEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARLFP--GLASRARDDAARADLADLGHP-VPEGDQSVRE-------- 104 (198)
T ss_dssp HCTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHST--TGGGGCCHHHHHHHHHHHTCC-CCCCCCTTTT--------
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccccC--chHhhhhHHHHHHHHHHhCCC-CcccCCCccc--------
Confidence 468899999999999999999999999988654 4433 467999999999999999443 2222244432
Q ss_pred HHHhcCcchhHhHHHHHHhhhcccchhhhcc------------------------------------CCCHHHHHHHHHH
Q 023558 219 ELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ------------------------------------HWTRDEKNKSLKE 262 (280)
Q Consensus 219 ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~------------------------------------~Ldeeek~~iIeE 262 (280)
...+|..+++|.||+ .||+||||+|+++ ++|++++++||+|
T Consensus 105 --~~~~~~~~lG~~YV~-eGs~lGGq~l~~~~~~l~l~~~~g~~f~~~~~~~~~~~wk~f~~~Ld~l~~d~~~~~~ii~~ 181 (198)
T 1sk7_A 105 --ADLSLAEALGWLFVS-EGSKLGAAFLFKKAAALELDENFGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKG 181 (198)
T ss_dssp --SCCCHHHHHHHHHHH-HHTTTTHHHHHHHHGGGTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred --ccCChHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcccchHhhCCCCccchHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 122556789999999 8999999999887 7899999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 023558 263 AAKSFKFLGQIVRLII 278 (280)
Q Consensus 263 A~~AF~lN~~Ifr~I~ 278 (280)
|+.+|.+|+++|+.|.
T Consensus 182 A~~aF~l~~~~l~~~~ 197 (198)
T 1sk7_A 182 ASDAFNRFGDLLERTF 197 (198)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 8
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=99.82 E-value=3.4e-20 Score=162.90 Aligned_cols=123 Identities=14% Similarity=0.205 Sum_probs=102.3
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcCCCCC-CCCchHHHHHHHH
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGIIIP-EPSTPGVSYAKYL 217 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~~~p-~P~pat~~Yv~rL 217 (280)
.++.+++++|++||.++|+||.+||.+++.+.. +.+. ..+++.|.+.|++||++| |.+...+ .|.+ +
T Consensus 33 ~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~--~~~e~~R~~~L~~DL~~l-G~~~~~v~~~~~-------~- 101 (209)
T 1j77_A 33 VQPFVSKENYIKFLKLQSVFHKAVDHIYKDAELNKAIP--ELEYMARYDAVTQDLKDL-GEEPYKFDKELP-------Y- 101 (209)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHST--TGGGGCCHHHHHHHHHHT-TCCCCCCSSCCC-------C-
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCcccC--ChHhhhhHHHHHHHHHHh-CCChhhccCCCC-------C-
Confidence 568899999999999999999999999988654 4433 368999999999999999 5543322 2221 1
Q ss_pred HHHHhcCcchhHhHHHHHHhhhcccchhhhcc------------------------------------CCCHHHHHHHHH
Q 023558 218 EELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ------------------------------------HWTRDEKNKSLK 261 (280)
Q Consensus 218 ~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~------------------------------------~Ldeeek~~iIe 261 (280)
-+|..+++|.||+ .||+||||+|+++ ++|++++++||+
T Consensus 102 -----~~~~~~~G~~YV~-eGs~lGGq~l~k~~~~l~l~~~~g~~f~~~~~~~~~~~w~~fr~~Ld~l~~d~~~~~~ii~ 175 (209)
T 1j77_A 102 -----EAGNKAIGWLYCA-EGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHLNALNLTPEAEAEAIQ 175 (209)
T ss_dssp -----CCHHHHHHHHHHH-HHHHHTTHHHHHHHHTTTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred -----CChHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcccchhhhCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 2456688999998 8999999999887 789999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 023558 262 EAAKSFKFLGQIVRLIIL 279 (280)
Q Consensus 262 EA~~AF~lN~~Ifr~I~~ 279 (280)
||+.+|.+|+++|+.+..
T Consensus 176 ~A~~aF~l~~~~f~~l~~ 193 (209)
T 1j77_A 176 GAREAFAFYKVVLRETFG 193 (209)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999998753
No 9
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=99.40 E-value=1e-12 Score=115.30 Aligned_cols=138 Identities=9% Similarity=-0.003 Sum_probs=112.2
Q ss_pred CCccccCHHHHHHHHHHHHHHHHH----HHHHHHhcCCcc------cccccCCCccchHHHHHHHHHHhhcCC---CCCC
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNT----IERIVDDSNDVA------YAYFRKTGLERSEGISRDLEWFSEQGI---IIPE 205 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~A----LE~av~~~~dp~------~a~f~~peL~Rs~aLekDL~~f~G~~~---~~p~ 205 (280)
...+.++++.|..||.|.|+++.. |+.++.+..+.. +..+...++.+-..+.+|++.+ |-+. ....
T Consensus 31 l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~~~~~~~~~~~~~~~~e~~~e~~~~~~l~~~-G~~~~~~~~~~ 109 (239)
T 3dde_A 31 VLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCFHHAHEEAGHELMALSDIASI-GFDREDVLSSK 109 (239)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHTTTHHHHHHHHHHT-TCCHHHHHTCC
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHChHHHHHHHHHHh-CCCHHHHHhCC
Confidence 356799999999999999999855 888888887743 3445667888887889998876 6652 2356
Q ss_pred CCchHHHHHHHHHHHHh-cCcchhHhHHHH-HHhhhcccchhhhcc----------------------------------
Q 023558 206 PSTPGVSYAKYLEELAE-KSAPLFLSHFYN-IYFSHVAGGQVIERQ---------------------------------- 249 (280)
Q Consensus 206 P~pat~~Yv~rL~ela~-~~P~lLVAHaYt-RYLGDLSGGQiI~r~---------------------------------- 249 (280)
|+|++.+|+++|..++. .+|..++||+|+ .+.++ +|||++..+
T Consensus 110 ~~pat~aY~~~l~~~a~~~~~~~~la~~~~~E~~y~-~~~~~~~~l~~~~~l~~~~~~f~~~h~~~d~~h~~~~~~~ld~ 188 (239)
T 3dde_A 110 PLPATETLIAYLYWISATGNPVQRLGYSYWAENVYG-YIDPVLKAIQSTLDLTPQSMKFFIAHSKIDAKHAEEVNEMLHE 188 (239)
T ss_dssp CCHHHHHHHHHHHHHHHSSCGGGGHHHHHHHHTCHH-HHHHHHHHHHHHTTCCGGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhH-HHHHHHHHHHHHhCcCHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 88899999999999875 689999999995 33334 899987644
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558 250 -HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278 (280)
Q Consensus 250 -~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~ 278 (280)
.+|++++++||++|+.+|++|.++|+.|-
T Consensus 189 ~~~~~~~~~~ii~~a~~~~~l~~~~f~~l~ 218 (239)
T 3dde_A 189 VCKTQEDVDSVVAVMENSLVLTARILDDVW 218 (239)
T ss_dssp HCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999874
No 10
>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}
Probab=70.47 E-value=9.4 Score=32.27 Aligned_cols=91 Identities=13% Similarity=0.071 Sum_probs=52.4
Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHH----HHhcCCcc----cccccCCCccchHHHHHHHHHHhhcC---CCCCCCC
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNTIERI----VDDSNDVA----YAYFRKTGLERSEGISRDLEWFSEQG---IIIPEPS 207 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~a----v~~~~dp~----~a~f~~peL~Rs~aLekDL~~f~G~~---~~~p~P~ 207 (280)
.+.|.++.+.|..||.|=|+.-...=++ +.+. ++. +......-++.--.+-+++.--+|-+ .....|+
T Consensus 31 l~~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka-~~~~~~~~~~~~~~~i~~E~~~h~~~~~~~Gi~~~~~~~~~~~ 109 (214)
T 2qzc_A 31 MRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKG-PIDKVTKILNLVFSSRDKGLETHGKLYSKLDISRDVIVKTGYN 109 (214)
T ss_dssp HHTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHTCC--CHHHHHHHHHHHTTCCHHHHHHSCCC
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCC
Confidence 3568999999999999877665544443 4343 421 11112111222234444433333433 1235678
Q ss_pred chHHHHHHHHHHHHhcCcchhHh
Q 023558 208 TPGVSYAKYLEELAEKSAPLFLS 230 (280)
Q Consensus 208 pat~~Yv~rL~ela~~~P~lLVA 230 (280)
|++..|++++..++..++..+++
T Consensus 110 p~t~aY~~~l~~~a~~~~~~~~a 132 (214)
T 2qzc_A 110 LINYAYTRHLYYYANLDWNKFLV 132 (214)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHH
Confidence 88999999999987665544443
No 11
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=65.94 E-value=53 Score=28.93 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=49.9
Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHH----HHhcCCcc----cccccCCCccchHHHHHHHHHHhhcC---CCCCCCC
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNTIERI----VDDSNDVA----YAYFRKTGLERSEGISRDLEWFSEQG---IIIPEPS 207 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~a----v~~~~dp~----~a~f~~peL~Rs~aLekDL~~f~G~~---~~~p~P~ 207 (280)
.+.+.++.+.|..||.|=|+.-...=++ +.+..++. +.......++.--.+-+++.--+|-+ .....|+
T Consensus 54 l~~GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~~~~~~~l~~~i~~~~~~E~~lh~~~~~~~Gi~~~~l~~~~~~ 133 (263)
T 2qcx_A 54 IGDGTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPS 133 (263)
T ss_dssp HHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHSCCCC
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCC
Confidence 3567999999999999877665544444 43433321 11111000111112222322223433 2235678
Q ss_pred chHHHHHHHHHHHHhc-CcchhHh
Q 023558 208 TPGVSYAKYLEELAEK-SAPLFLS 230 (280)
Q Consensus 208 pat~~Yv~rL~ela~~-~P~lLVA 230 (280)
|++..|++++..++.. ++..+++
T Consensus 134 pat~aYt~~l~~~a~~g~~~~~la 157 (263)
T 2qcx_A 134 PTAYSFTSHMYRSVLSGNFAEILA 157 (263)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCHHHHHH
Confidence 8899999999999864 4443333
No 12
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=62.62 E-value=8 Score=33.26 Aligned_cols=87 Identities=11% Similarity=0.017 Sum_probs=53.4
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHhcC----Ccc----c----ccccCCCccchHHHHHHHHHHhhcCC----CC
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSN----DVA----Y----AYFRKTGLERSEGISRDLEWFSEQGI----II 203 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~----dp~----~----a~f~~peL~Rs~aLekDL~~f~G~~~----~~ 203 (280)
+.|.++.+.|..||.|=|+--...=+++.... ++. + ..+...|+ .+-.++.--+|-+. ..
T Consensus 28 ~~GtL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~~E~----~~h~~~~~~~gi~~~~~~~~ 103 (229)
T 4fn6_A 28 LLGNIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEV----LAHDILAQIVGESYEEIIKT 103 (229)
T ss_dssp HHTCCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHSCCC----HHHHHHHHHHTSCHHHHHHS
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCCCHHHHhhh
Confidence 56799999999999998776666555554442 211 1 11223343 23344333345441 33
Q ss_pred CCCCchHHHHHHHHHHHHhc--CcchhHh
Q 023558 204 PEPSTPGVSYAKYLEELAEK--SAPLFLS 230 (280)
Q Consensus 204 p~P~pat~~Yv~rL~ela~~--~P~lLVA 230 (280)
..|+|++..|+++|..++.. ++..+++
T Consensus 104 ~~~~p~~~aY~~~l~~~a~~~~~~~~~~a 132 (229)
T 4fn6_A 104 KVWPPSGDHYIKHMYFQAHSRENAIYTIA 132 (229)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhhcCCHHHHHH
Confidence 56888999999999999875 5544443
No 13
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=60.95 E-value=9.7 Score=32.48 Aligned_cols=89 Identities=15% Similarity=0.071 Sum_probs=48.6
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHH----HhcCCcc----cccccCCCccchHHHHHHHHHHhhcC---CCCCCCCc
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNTIERIV----DDSNDVA----YAYFRKTGLERSEGISRDLEWFSEQG---IIIPEPST 208 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av----~~~~dp~----~a~f~~peL~Rs~aLekDL~~f~G~~---~~~p~P~p 208 (280)
+.|.++.+.|..||.|=|+.-...=+++ .+..++. +..+...-+..--.+-+++.--+|-+ .....|+|
T Consensus 36 ~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~l~~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p 115 (221)
T 2gm8_A 36 YAGTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNR 115 (221)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCH
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCh
Confidence 5679999999999998776655444443 3333321 11100010111112333322223432 12356788
Q ss_pred hHHHHHHHHHHHHhc-Ccchh
Q 023558 209 PGVSYAKYLEELAEK-SAPLF 228 (280)
Q Consensus 209 at~~Yv~rL~ela~~-~P~lL 228 (280)
++..|++++..++.. ++..+
T Consensus 116 ~t~aY~~~l~~~a~~~~~~~~ 136 (221)
T 2gm8_A 116 VNVSYMAYLKSTCALEGFYQC 136 (221)
T ss_dssp HHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHH
Confidence 899999999998764 44433
No 14
>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A
Probab=60.60 E-value=11 Score=32.07 Aligned_cols=90 Identities=7% Similarity=-0.020 Sum_probs=49.3
Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHH----HHhcCCcc----cccccCCCccchHHHHHHHHHHhhcCC---CCCCCC
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNTIERI----VDDSNDVA----YAYFRKTGLERSEGISRDLEWFSEQGI---IIPEPS 207 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~a----v~~~~dp~----~a~f~~peL~Rs~aLekDL~~f~G~~~---~~p~P~ 207 (280)
.+.|.++.+.|..||.|=|+.-...=++ +.+..++. +..+...-++.--.+-+++.--+|-+. ....|+
T Consensus 40 l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~ 119 (225)
T 1z72_A 40 LFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLH 119 (225)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTHHHHSCCCC
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhcCCC
Confidence 3567999999999999877665544444 33433321 011111111111123333222234331 235678
Q ss_pred chHHHHHHHHHHHHhc-Ccchh
Q 023558 208 TPGVSYAKYLEELAEK-SAPLF 228 (280)
Q Consensus 208 pat~~Yv~rL~ela~~-~P~lL 228 (280)
|++..|++++..++.. ++..+
T Consensus 120 p~t~aY~~~l~~~a~~~~~~~~ 141 (225)
T 1z72_A 120 PVTKAFQDLMYSAVASSDYAHL 141 (225)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHccCCHHHH
Confidence 8899999999998764 44443
No 15
>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3
Probab=58.55 E-value=12 Score=31.86 Aligned_cols=88 Identities=11% Similarity=0.041 Sum_probs=49.0
Q ss_pred CccccCHHHHHHHHHHHHHHHHH----HHHHHHhcCCcc----cccccCCCccchHHHHHHHHHHhhcC---CCCCCCCc
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNT----IERIVDDSNDVA----YAYFRKTGLERSEGISRDLEWFSEQG---IIIPEPST 208 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~A----LE~av~~~~dp~----~a~f~~peL~Rs~aLekDL~~f~G~~---~~~p~P~p 208 (280)
+.|.++.+.|..||.|=|+.-.. +-.++.+. ++. +......-+..--.+-.++.--+|-+ .....|+|
T Consensus 30 ~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~~~~~~~l~~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p 108 (226)
T 1udd_A 30 YSGTLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-EYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTL 108 (226)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTHHHHHHHHHHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCH
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCH
Confidence 56799999999999987765544 34444444 421 11111110111123333322223433 12356788
Q ss_pred hHHHHHHHHHHHHhc-Ccchh
Q 023558 209 PGVSYAKYLEELAEK-SAPLF 228 (280)
Q Consensus 209 at~~Yv~rL~ela~~-~P~lL 228 (280)
++..|++++..++.. ++..+
T Consensus 109 ~t~aY~~~l~~~a~~~~~~~~ 129 (226)
T 1udd_A 109 VNSAYMDFMLATAYKGNIIEG 129 (226)
T ss_dssp HHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHH
Confidence 899999999998764 44433
No 16
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=55.62 E-value=40 Score=28.59 Aligned_cols=86 Identities=16% Similarity=0.138 Sum_probs=50.3
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHH----HHhcCCcc----c----ccccCCCccchHHHHHHHHHHhhcC---CCCC
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNTIERI----VDDSNDVA----Y----AYFRKTGLERSEGISRDLEWFSEQG---IIIP 204 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~a----v~~~~dp~----~----a~f~~peL~Rs~aLekDL~~f~G~~---~~~p 204 (280)
+.|.++.+.|..||.|=|+--...=++ +.+..++. + ..+...|+. +-.++.--+|-+ ....
T Consensus 32 ~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~~E~~----~h~~~~~~~Gi~~~~~~~~ 107 (221)
T 3ibx_A 32 GRGTLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNEMS----IHNHYIRELQITQKELQNA 107 (221)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHSCTTS----HHHHHHHHTTCCHHHHHHC
T ss_pred HcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHcCCCHHHHhhc
Confidence 567999999999999877665544443 33333311 1 112233432 333322223443 1234
Q ss_pred CCCchHHHHHHHHHHHHhc-CcchhH
Q 023558 205 EPSTPGVSYAKYLEELAEK-SAPLFL 229 (280)
Q Consensus 205 ~P~pat~~Yv~rL~ela~~-~P~lLV 229 (280)
.|+|++..|+++|..++.. ++..++
T Consensus 108 ~~~p~~~aY~~~l~~~a~~~~~~~~~ 133 (221)
T 3ibx_A 108 CPTLANKSYTSYMLAEGFKGSIKEVA 133 (221)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 6788999999999998764 444333
No 17
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
Probab=54.83 E-value=96 Score=26.11 Aligned_cols=86 Identities=16% Similarity=0.021 Sum_probs=48.0
Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHH----hcCCcc----cccccCCCccchHHHHHHHHHH--hhcCCCCCCCCc
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNTIERIVD----DSNDVA----YAYFRKTGLERSEGISRDLEWF--SEQGIIIPEPST 208 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~----~~~dp~----~a~f~~peL~Rs~aLekDL~~f--~G~~~~~p~P~p 208 (280)
.+.|.++.+.|..||.|=|+.-...=+++. +..++. ...+.. -...+|.++--+ +|-+. ...|+|
T Consensus 26 l~~GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~l~~----~~~~iE~~lh~~~~~Gi~~-~~~~~p 100 (220)
T 1rtw_A 26 MAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFFAESIYY----ISKELEMFEKKAQELGISL-NGEIDW 100 (220)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHH----HHHHHHHHHHHHHHTTCCS-SSCCCH
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHH----HHHHHHHHHHHHHHCCCCC-CCCCCH
Confidence 356899999999999987766554444433 332311 100100 011113333221 23323 456788
Q ss_pred hHHHHHHHHHHHHhc-CcchhH
Q 023558 209 PGVSYAKYLEELAEK-SAPLFL 229 (280)
Q Consensus 209 at~~Yv~rL~ela~~-~P~lLV 229 (280)
++.+|++++..++.. ++..++
T Consensus 101 ~t~aY~~~l~~~a~~~~~~~~l 122 (220)
T 1rtw_A 101 RAKSYVNYLLSVASLGSFLEGF 122 (220)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHccCCHHHHH
Confidence 889999999999764 444433
No 18
>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
Probab=53.71 E-value=58 Score=27.29 Aligned_cols=91 Identities=12% Similarity=0.127 Sum_probs=49.7
Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc-----ccc---ccCCCccchHHHHHHHHHHhhcCCCCCCC
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA-----YAY---FRKTGLERSEGISRDLEWFSEQGIIIPEP 206 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~----~dp~-----~a~---f~~peL~Rs~aLekDL~~f~G~~~~~p~P 206 (280)
.+.|.++.+.|..||.|=|+.-...=+++... .++. ... .... +..--.+-+++.--+|-+.....|
T Consensus 30 l~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~~l~~~~~~-~~~E~~~h~~~~~~~Gi~~~~~~~ 108 (221)
T 2f2g_A 30 IRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLGGIAS-LNDEIEWFKREGSKWDVDFSTVVP 108 (221)
T ss_dssp EETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCC
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCChhhcCC
Confidence 46779999999999998777655444443322 2211 100 1111 221222223222222333334567
Q ss_pred CchHHHHHHHHHHH-Hhc-CcchhHh
Q 023558 207 STPGVSYAKYLEEL-AEK-SAPLFLS 230 (280)
Q Consensus 207 ~pat~~Yv~rL~el-a~~-~P~lLVA 230 (280)
+|++..|++++..+ +.. ++..+++
T Consensus 109 ~p~~~aY~~~l~~~~~~~~~~~~~~a 134 (221)
T 2f2g_A 109 QRANQEYGRFLEDLMSSEVKYPVIMT 134 (221)
T ss_dssp CHHHHHHHHHHHHTTSTTSCHHHHHH
T ss_pred CHHHHHHHHHHHHhhccCCCHHHHHH
Confidence 88889999999998 653 4544443
No 19
>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0
Probab=49.76 E-value=24 Score=30.20 Aligned_cols=87 Identities=13% Similarity=0.159 Sum_probs=49.4
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHH----HHhcCCcc-c-------ccccCCCccchHHHHHHHHHHhhcC---CCCC
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNTIERI----VDDSNDVA-Y-------AYFRKTGLERSEGISRDLEWFSEQG---IIIP 204 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~a----v~~~~dp~-~-------a~f~~peL~Rs~aLekDL~~f~G~~---~~~p 204 (280)
+.|.++.+.|..||.|=|+--...=++ +.+..++. . ..+...|+ .+-.++.--+|-+ ....
T Consensus 34 ~~GtL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~~E~----~~h~~~~~~~Gi~~~~~~~~ 109 (226)
T 3mvu_A 34 KAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVNALVAEEM----QLHIGICEASGISQEALFAT 109 (226)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHTTHH----HHHHHHHHHTTCCHHHHHTC
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCCCHHHHhhC
Confidence 567999999999999877665554444 33333311 1 11112222 2333322223433 1234
Q ss_pred CCCchHHHHHHHHHHHHhc-CcchhHh
Q 023558 205 EPSTPGVSYAKYLEELAEK-SAPLFLS 230 (280)
Q Consensus 205 ~P~pat~~Yv~rL~ela~~-~P~lLVA 230 (280)
.|+|++..|+++|..++.. ++..+++
T Consensus 110 ~~~p~~~aY~~~l~~~a~~~~~~~~~a 136 (226)
T 3mvu_A 110 RERAENLAYTRFVLEAGYSGDLLDLLA 136 (226)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 6788899999999998764 4443433
No 20
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=48.86 E-value=25 Score=30.90 Aligned_cols=81 Identities=16% Similarity=0.027 Sum_probs=49.3
Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc----c----ccccCCCccchHHHHHHHHHHhhcC---C-C
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA----Y----AYFRKTGLERSEGISRDLEWFSEQG---I-I 202 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~----~dp~----~----a~f~~peL~Rs~aLekDL~~f~G~~---~-~ 202 (280)
.+.|.++.+.|..||+|=|+--...=+++... .++. + ..+...|+ .+-.++.--.|-+ . .
T Consensus 46 L~~GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~~~~~~~~~~~~~~~~~~E~----~lh~~~~~~~gi~~~~~~~ 121 (248)
T 3no6_A 46 LLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFMLEGEV----EAHEVLADFINEPYEEIVK 121 (248)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTCCC----HHHHHHHHHTTSCHHHHCC
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCCCHHHHhh
Confidence 35789999999999998776665555554333 3311 1 11123333 2333433223443 1 3
Q ss_pred CCCCCchHHHHHHHHHHHHhc
Q 023558 203 IPEPSTPGVSYAKYLEELAEK 223 (280)
Q Consensus 203 ~p~P~pat~~Yv~rL~ela~~ 223 (280)
...|+|++.+|.++|..++..
T Consensus 122 ~~~~~p~~~aYt~~ll~~a~~ 142 (248)
T 3no6_A 122 EKVWPPSGDHYIKHMYFNAFA 142 (248)
T ss_dssp SCCCCHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHhc
Confidence 456788899999999999875
No 21
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=44.18 E-value=36 Score=28.41 Aligned_cols=94 Identities=11% Similarity=-0.002 Sum_probs=47.1
Q ss_pred CCccccCHHHHHHHHHHHHHHH----HHHHHHHHhcCCccccc-c---cCCCc---cc-hHHHHHHHHHHhhcC---CCC
Q 023558 139 GETWKPSMDAFVKYLVDSQLVF----NTIERIVDDSNDVAYAY-F---RKTGL---ER-SEGISRDLEWFSEQG---III 203 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY----~ALE~av~~~~dp~~a~-f---~~peL---~R-s~aLekDL~~f~G~~---~~~ 203 (280)
...+.++++.|..||.|-|+.= ..+-.++.+..++.... + ...++ .. .+-..++++. +|-+ ...
T Consensus 30 l~~G~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~~~~~~~~~~~i~~e~~~~~~h~~l~~~~~~~-~Gi~~~~~~~ 108 (231)
T 1rcw_A 30 WSKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENGYPNHIDLWKQFVFA-LGVTPEELEA 108 (231)
T ss_dssp HHTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHH-TTCCHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCChHHHHHHHHHH-cCCCHHHHhc
Confidence 3567999999999999954432 22333333333321100 1 00110 01 1112222222 2433 123
Q ss_pred CCCCchHHHHHHHHHHHHhc-CcchhHhHHH
Q 023558 204 PEPSTPGVSYAKYLEELAEK-SAPLFLSHFY 233 (280)
Q Consensus 204 p~P~pat~~Yv~rL~ela~~-~P~lLVAHaY 233 (280)
..|+|++..|++++..++.. ++...+|=.+
T Consensus 109 ~~~~p~t~~y~~~~~~~~~~~~~~~~laal~ 139 (231)
T 1rcw_A 109 HEPSEAAKAKVATFMRWCTGDSLAAGVAALY 139 (231)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 45778888999999999865 4443333343
No 22
>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3
Probab=40.32 E-value=47 Score=27.58 Aligned_cols=80 Identities=15% Similarity=0.158 Sum_probs=46.6
Q ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHHH----HhcCCcccccccCCCccchHHHHHHHHHHhhcCCC-CCCCCchHH
Q 023558 137 NDGETWKPSMDAFVKYLVDSQLVFNTIERIV----DDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGII-IPEPSTPGV 211 (280)
Q Consensus 137 ~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~av----~~~~dp~~a~f~~peL~Rs~aLekDL~~f~G~~~~-~p~P~pat~ 211 (280)
.|| .++.+.|..||.|=|+.-...=+++ .+..+.....+..- ...+.....|+..-|.+ ...|+|++.
T Consensus 22 HpF---tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~~~~~~~~~~----~~~~~~E~~~~~~~gi~~~~~~~p~~~ 94 (190)
T 1wwm_A 22 LPL---RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAHRAPLVQA----LMATVEELDWLLLQGASPSAPVHPVRA 94 (190)
T ss_dssp CCC---CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHHHHHHHHHH----HHHHHHHHHHHHTTTCCSSSCCCHHHH
T ss_pred CCC---CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCChHHHHHHHHH----HHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 678 9999999999998776655444443 33333211111100 01111114566444422 456778888
Q ss_pred HHHHHHHHHHhc
Q 023558 212 SYAKYLEELAEK 223 (280)
Q Consensus 212 ~Yv~rL~ela~~ 223 (280)
+|.+++..++..
T Consensus 95 aY~~~l~~~a~~ 106 (190)
T 1wwm_A 95 GYIALLEEMGRL 106 (190)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHcCC
Confidence 999999999873
No 23
>4g5a_A Uncharacterized protein; immunoglobulin - like beta-sandwich, structural genomics, JO center for structural genomics, JCSG; 1.69A {Bacteroides thetaiotaomicron}
Probab=32.24 E-value=4.5 Score=31.72 Aligned_cols=18 Identities=22% Similarity=0.429 Sum_probs=14.2
Q ss_pred hHhHHHHHHhhhcccchh
Q 023558 228 FLSHFYNIYFSHVAGGQV 245 (280)
Q Consensus 228 LVAHaYtRYLGDLSGGQi 245 (280)
.+|--||.||||+|-||-
T Consensus 65 v~ageytlyl~d~s~~~~ 82 (99)
T 4g5a_A 65 VAAGEYTLYLGDLSLGQY 82 (99)
T ss_dssp CSSEEEEEECTTCCSSEE
T ss_pred eecceEEEEeCChhcCce
Confidence 345678999999999883
No 24
>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=31.73 E-value=41 Score=29.72 Aligned_cols=82 Identities=12% Similarity=-0.018 Sum_probs=46.2
Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHH----hcCCcccccc---cCCCccchHHHHHHHHHHhhcCCC-CCCCCchH
Q 023558 139 GETWKPSMDAFVKYLVDSQLVFNTIERIVD----DSNDVAYAYF---RKTGLERSEGISRDLEWFSEQGII-IPEPSTPG 210 (280)
Q Consensus 139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~----~~~dp~~a~f---~~peL~Rs~aLekDL~~f~G~~~~-~p~P~pat 210 (280)
.+.+.++.+.|..||+|=|+.-...=+++. +..+.....| ....++ .|-.++.--+|-+.. ...|+|++
T Consensus 74 L~~GtL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~~~~~~~~~~~~~~~~---~lh~~~~~~~Gi~~~~~~~~~pat 150 (258)
T 2a2m_A 74 IAAGTLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQDETLREFFKAKAKSYD---EYNETYHQTWHLREASGLIPGTDI 150 (258)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH---HHHHHHHHTSCBCCGGGBCCCHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH---HHHHHHHHHcCCCHHHccCCCHHH
Confidence 356799999999999987766555544443 3333100001 101111 333332222233222 25678888
Q ss_pred HHHHHHHHHHHhc
Q 023558 211 VSYAKYLEELAEK 223 (280)
Q Consensus 211 ~~Yv~rL~ela~~ 223 (280)
.+|+++|..++..
T Consensus 151 ~aYt~~ll~~a~~ 163 (258)
T 2a2m_A 151 KDYADYEAYVAGS 163 (258)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998764
No 25
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=31.40 E-value=17 Score=34.02 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=28.3
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAAKSF 267 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~~AF 267 (280)
.|.-.||.+.|||||-=+-. .||...+.++.++-....
T Consensus 129 ~~~~~r~~~~LSGGq~QRValArAL~~~P~lLLLDEPts~LD~~~r~~l~~~l~~~~ 185 (359)
T 3fvq_A 129 SELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAAL 185 (359)
T ss_dssp GGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHH
T ss_pred chHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH
Confidence 45667899999999942111 899999999988766543
No 26
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=31.39 E-value=11 Score=32.52 Aligned_cols=31 Identities=16% Similarity=0.123 Sum_probs=23.4
Q ss_pred HHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHH
Q 023558 234 NIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 234 tRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~ 264 (280)
.+|.+.|||||-=+-. +||...+..+++--.
T Consensus 140 ~~~~~~LSgGq~QRv~iAral~~~p~llllDEPts~LD~~~~~~i~~~l~ 189 (235)
T 3tif_A 140 NHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLK 189 (235)
T ss_dssp TCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHH
T ss_pred hCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 6899999999942111 899999998886543
No 27
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=29.96 E-value=16 Score=34.21 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=27.9
Q ss_pred hHHHHHHhhhcccchhhh----cc---------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIE----RQ---------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~----r~---------------~Ldeeek~~iIeEA~~A 266 (280)
.|.-.||.+.|||||-=+ +. .||...+.+++++-...
T Consensus 132 ~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l 187 (372)
T 1v43_A 132 EELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKL 187 (372)
T ss_dssp GGGTTSCTTTCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHH
T ss_pred hhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHH
Confidence 455678999999999311 11 89999999999887653
No 28
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=29.31 E-value=16 Score=32.07 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=25.1
Q ss_pred hHH-HHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHH
Q 023558 230 SHF-YNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 230 AHa-YtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~ 264 (280)
.+. -.++.+.|||||-=+-. +||...+..+++--.
T Consensus 143 ~~~~~~~~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~LD~~~~~~~~~~l~ 197 (262)
T 1b0u_A 143 DERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQ 197 (262)
T ss_dssp CHHHHTSCGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHH
T ss_pred CchhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHH
Confidence 344 57899999999932111 899999988876543
No 29
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=28.24 E-value=15 Score=33.99 Aligned_cols=37 Identities=8% Similarity=0.071 Sum_probs=27.9
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~~A 266 (280)
.|.-.||.+.|||||-=+-. +||...+..+.++-+..
T Consensus 118 ~~~~~~~~~~LSgGq~QRvalAraL~~~P~lLLLDEP~s~LD~~~~~~l~~~l~~l 173 (348)
T 3d31_A 118 EHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVL 173 (348)
T ss_dssp TTTTTSCGGGSCHHHHHHHHHHHHTTSCCSEEEEESSSTTSCHHHHHHHHHHHHHH
T ss_pred chHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHH
Confidence 45567889999999942111 89999999998876653
No 30
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=28.21 E-value=17 Score=33.91 Aligned_cols=37 Identities=19% Similarity=0.165 Sum_probs=27.8
Q ss_pred hHHHHHHhhhcccchhh----hcc---------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVI----ERQ---------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI----~r~---------------~Ldeeek~~iIeEA~~A 266 (280)
.|.-.||.+.|||||-= ++. .||...+.++.++-+..
T Consensus 130 ~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l 185 (372)
T 1g29_1 130 TELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKL 185 (372)
T ss_dssp GGGTTCCGGGSCHHHHHHHHHHHHHHTCCSEEEEECTTTTSCHHHHHHHHHHHHHH
T ss_pred chHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHHHHHHHHHHHHHH
Confidence 45567889999999932 111 89999999998877653
No 31
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=28.10 E-value=14 Score=32.06 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=25.2
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~ 264 (280)
.+.-.++.+.|||||--+-. +||...+..+++--.
T Consensus 144 ~~~~~~~~~~LSgGqkQrv~iAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~ 197 (257)
T 1g6h_A 144 SHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVL 197 (257)
T ss_dssp GGGTTSBGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHH
T ss_pred chhhCCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHH
Confidence 45567889999999932211 899999988876443
No 32
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=28.02 E-value=17 Score=34.29 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=28.1
Q ss_pred hHHHHHHhhhcccchhhh----cc---------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIE----RQ---------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~----r~---------------~Ldeeek~~iIeEA~~A 266 (280)
.+.-.||.+.|||||-=+ +. .||...+.+++++-...
T Consensus 124 ~~~~~r~p~~LSGGqrQRVaiArAL~~~P~lLLLDEPts~LD~~~~~~l~~~l~~l 179 (381)
T 3rlf_A 124 AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRL 179 (381)
T ss_dssp GGGTTCCGGGSCHHHHHHHHHHHHHHHCCSEEEEESTTTTSCHHHHHHHHHHHHHH
T ss_pred chhhcCChhHCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHH
Confidence 456679999999999311 11 89999999998887654
No 33
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=27.99 E-value=18 Score=33.80 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=28.0
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~~A 266 (280)
.|.-.||.+.|||||-=+-. .||...+..++++-+..
T Consensus 136 ~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l 191 (355)
T 1z47_A 136 ESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQV 191 (355)
T ss_dssp GGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTCCSSHHHHHHHHHHHHHH
T ss_pred hhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH
Confidence 45667899999999942111 89999999998887654
No 34
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=27.87 E-value=18 Score=33.73 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=27.9
Q ss_pred hHHHHHHhhhcccchhhh----cc---------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIE----RQ---------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~----r~---------------~Ldeeek~~iIeEA~~A 266 (280)
.|.-.||.+.|||||-=+ +. +||...+..+.++-+..
T Consensus 124 ~~~~~r~~~~LSgGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l 179 (359)
T 2yyz_A 124 DNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHL 179 (359)
T ss_dssp GGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHH
T ss_pred chHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHH
Confidence 455678999999999421 11 89999999998887653
No 35
>1vzm_A Osteocalcin; calcium-binding protein, bone GLA protein, BGP, hydroxyapatite, gamma carboxyl glutamic acid, vitamin K, bone, mineralization; HET: CGU; 1.4A {Argyrosomus regius}
Probab=27.18 E-value=42 Score=23.25 Aligned_cols=26 Identities=15% Similarity=0.331 Sum_probs=18.8
Q ss_pred HHHHHHHHhcCcc-hhHhH------HHHHHhhh
Q 023558 214 AKYLEELAEKSAP-LFLSH------FYNIYFSH 239 (280)
Q Consensus 214 v~rL~ela~~~P~-lLVAH------aYtRYLGD 239 (280)
.++++|+++.+++ ..+|+ +|+||+|-
T Consensus 10 ~E~~rEvCE~~~~C~~~A~~~G~~~AY~ryfG~ 42 (45)
T 1vzm_A 10 TESLREVCETNMACDEMADAQGIVAAYQAFYGP 42 (45)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHhccchhHHHHHHHHHHHHHHHHHcCC
Confidence 5688899888764 44443 68999984
No 36
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=26.69 E-value=16 Score=32.58 Aligned_cols=35 Identities=11% Similarity=-0.048 Sum_probs=25.5
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~ 264 (280)
.+.-.+|.+.|||||-=+-. +||...+..+++--.
T Consensus 134 ~~~~~~~~~~LSgGqkQRv~iAraL~~~P~lLlLDEPts~LD~~~~~~i~~~l~ 187 (275)
T 3gfo_A 134 EHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLV 187 (275)
T ss_dssp GGGTTSBGGGSCHHHHHHHHHHHHHTTCCSEEEEECTTTTCCHHHHHHHHHHHH
T ss_pred chhhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHH
Confidence 45567899999999941111 899999988876543
No 37
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=26.38 E-value=14 Score=34.79 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=25.7
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~ 264 (280)
.+.-.+|.+.|||||-=+-. .||...+..|++--.
T Consensus 154 ~~~~~~~~~~LSGGqkQRVaIArAL~~~P~lLLlDEPTs~LD~~~~~~i~~lL~ 207 (366)
T 3tui_C 154 GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLK 207 (366)
T ss_dssp GGGTTCCTTTSCHHHHHHHHHHHHTTTCCSEEEEESTTTTSCHHHHHHHHHHHH
T ss_pred chHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHH
Confidence 45567899999999941111 899999998887544
No 38
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=25.19 E-value=14 Score=34.20 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=27.3
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~~A 266 (280)
.|.-.||.+.|||||-=+-. +||...+..++++-+..
T Consensus 131 ~~~~~~~~~~LSGGq~QRvalAraL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l 186 (353)
T 1oxx_K 131 HHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEV 186 (353)
T ss_dssp GGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCGGGHHHHHHHHHHH
T ss_pred chHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHH
Confidence 45667899999999942111 89999999888876543
No 39
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=24.62 E-value=17 Score=34.01 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=27.9
Q ss_pred hHHHHHHhhhcccchh----hhcc---------------CCCHHHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQV----IERQ---------------HWTRDEKNKSLKEAAKS 266 (280)
Q Consensus 230 AHaYtRYLGDLSGGQi----I~r~---------------~Ldeeek~~iIeEA~~A 266 (280)
.|.-.||.+.|||||- |++. +||...+.++.++-+..
T Consensus 124 ~~~~~r~~~~LSGGq~QRvalArAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l 179 (362)
T 2it1_A 124 DKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179 (362)
T ss_dssp TTCTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESGGGGSCHHHHHHHHHHHHHH
T ss_pred chHhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHH
Confidence 4555788999999994 2211 89999999998887654
No 40
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=24.28 E-value=16 Score=31.70 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=24.5
Q ss_pred hHHHHHHhhhcccchhhh----cc---------------CCCHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIE----RQ---------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~----r~---------------~Ldeeek~~iIeEA~ 264 (280)
.+.-.++.+.|||||-=+ +. +||...+..+++--.
T Consensus 117 ~~~~~~~~~~LSgGqkqRv~lAral~~~p~lllLDEPts~LD~~~~~~~~~~l~ 170 (240)
T 2onk_A 117 AHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELR 170 (240)
T ss_dssp TTTTTCCGGGSCHHHHHHHHHHHHHTTCCSSBEEESTTSSCCHHHHHHHHHHHH
T ss_pred HHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 344567889999999421 11 899999888876543
No 41
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=24.02 E-value=15 Score=31.32 Aligned_cols=33 Identities=6% Similarity=0.029 Sum_probs=23.5
Q ss_pred HHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHH
Q 023558 231 HFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEA 263 (280)
Q Consensus 231 HaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA 263 (280)
|.-.++.+.|||||--+-. +||...+..+++--
T Consensus 132 ~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l 183 (224)
T 2pcj_A 132 DKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIF 183 (224)
T ss_dssp TCTTCCGGGSCHHHHHHHHHHHHTTTCCSEEEEESTTTTCCHHHHHHHHHHH
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHH
Confidence 4446788999999932111 89999988887644
No 42
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=23.52 E-value=20 Score=31.90 Aligned_cols=34 Identities=12% Similarity=-0.014 Sum_probs=24.2
Q ss_pred hHHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEA 263 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA 263 (280)
.+.-.++.+.|||||.=+-. +||...+..+++--
T Consensus 152 ~~~~~~~~~~LSgGqkqRv~lAraL~~~p~lLlLDEPts~LD~~~~~~l~~~l 204 (279)
T 2ihy_A 152 SAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSIL 204 (279)
T ss_dssp GGGTTSBGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHH
T ss_pred hhHhcCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHH
Confidence 34456889999999942111 89999998887643
No 43
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=22.32 E-value=21 Score=31.48 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=24.8
Q ss_pred hHHHHHHhhhcccchhh----hcc---------------CCCHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVI----ERQ---------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI----~r~---------------~Ldeeek~~iIeEA~ 264 (280)
.+.-.++.+.|||||-= ++. +||...+..+++--.
T Consensus 150 ~~~~~~~~~~LSgGqkQRv~lAraL~~~p~lllLDEPts~LD~~~~~~~~~~l~ 203 (263)
T 2olj_A 150 KDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMK 203 (263)
T ss_dssp GGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHH
T ss_pred chHhcCChhhCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 34457889999999941 111 899999888776543
No 44
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=21.97 E-value=22 Score=31.04 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=23.6
Q ss_pred HHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHH
Q 023558 231 HFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEA 263 (280)
Q Consensus 231 HaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA 263 (280)
+.-.++.+.|||||.=+-. +||...+..+++--
T Consensus 120 ~~~~~~~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l 171 (253)
T 2nq2_C 120 HLAKREFTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQDIVLSLL 171 (253)
T ss_dssp GGTTSBGGGSCHHHHHHHHHHHHHHTTCSEEEESSSSTTSCHHHHHHHHHHH
T ss_pred HHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 4446788999999942211 89999988887644
No 45
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=21.77 E-value=4e+02 Score=25.75 Aligned_cols=80 Identities=6% Similarity=0.097 Sum_probs=46.5
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHH----HHhcCCcc-cccccCCCccchHHHHHHHHHHh-------hc-C---CCC
Q 023558 140 ETWKPSMDAFVKYLVDSQLVFNTIERI----VDDSNDVA-YAYFRKTGLERSEGISRDLEWFS-------EQ-G---III 203 (280)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~a----v~~~~dp~-~a~f~~peL~Rs~aLekDL~~f~-------G~-~---~~~ 203 (280)
+.+.++.+.|..||.|=|+--...=++ +.+..+.. ...|.. + ...|...+.++. |- + ...
T Consensus 359 ~~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~~~~~~~~~~--~--~~~i~~E~~~h~~~~~~~~gi~~~~~~~~ 434 (550)
T 3rm5_A 359 ADGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELV--I--VGGVRTEMGQHEKRLKEVFGVKDPDYFQK 434 (550)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHH--H--HHHHHHHHHHHHHHHHHTSCCCCTTTTTS
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH--H--HHHHHHHHHHHHHHHHHHhCCCCHHHHhh
Confidence 567999999999999877665544444 44444421 111111 0 122333333322 22 2 223
Q ss_pred CCCCchHHHHHHHHHHHHhc
Q 023558 204 PEPSTPGVSYAKYLEELAEK 223 (280)
Q Consensus 204 p~P~pat~~Yv~rL~ela~~ 223 (280)
..|+|++.+|.++|..++..
T Consensus 435 ~~~~p~~~aYt~~l~~~a~~ 454 (550)
T 3rm5_A 435 IKRGPALRAYSRYFNDVSRR 454 (550)
T ss_dssp CCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHcc
Confidence 46788888999999999875
No 46
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=21.41 E-value=24 Score=30.87 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=24.0
Q ss_pred HHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHH
Q 023558 231 HFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEA 263 (280)
Q Consensus 231 HaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA 263 (280)
+.-.++.+.|||||.-+-. +||...+..+++--
T Consensus 130 ~~~~~~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l 181 (266)
T 2yz2_A 130 SFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIV 181 (266)
T ss_dssp HHTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHH
T ss_pred ccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCccccCCHHHHHHHHHHH
Confidence 5556788999999942111 89999998887643
No 47
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=21.15 E-value=20 Score=30.76 Aligned_cols=35 Identities=9% Similarity=-0.010 Sum_probs=25.1
Q ss_pred hHHHHHHhhhcccchhhh----cc---------------CCCHHHHHHHHHHHH
Q 023558 230 SHFYNIYFSHVAGGQVIE----RQ---------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 230 AHaYtRYLGDLSGGQiI~----r~---------------~Ldeeek~~iIeEA~ 264 (280)
.|.-.++.+.|||||.=+ +. +||...+..+++--.
T Consensus 130 ~~~~~~~~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~ 183 (240)
T 1ji0_A 130 KERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQ 183 (240)
T ss_dssp HTTTTSBSSSSCHHHHHHHHHHHHHTTCCSEEEEECTTTTCCHHHHHHHHHHHH
T ss_pred hhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 455567889999999421 11 899999988876544
No 48
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=20.95 E-value=26 Score=30.68 Aligned_cols=34 Identities=12% Similarity=-0.133 Sum_probs=23.9
Q ss_pred HHHHHHhhhcccchhhhcc-------------------CCCHHHHHHHHHHHH
Q 023558 231 HFYNIYFSHVAGGQVIERQ-------------------HWTRDEKNKSLKEAA 264 (280)
Q Consensus 231 HaYtRYLGDLSGGQiI~r~-------------------~Ldeeek~~iIeEA~ 264 (280)
+.-.++.+.|||||.-+-. +||...+..+++--.
T Consensus 138 ~~~~~~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~ 190 (256)
T 1vpl_A 138 EKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILK 190 (256)
T ss_dssp GGGGSBGGGCCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHH
T ss_pred hHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCccccCHHHHHHHHHHHH
Confidence 3346788999999942211 899999888876443
No 49
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=20.90 E-value=26 Score=30.30 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=19.6
Q ss_pred HHHHHHhhh-cccchhh----hcc---------------CCCHHHHHHHHHHH
Q 023558 231 HFYNIYFSH-VAGGQVI----ERQ---------------HWTRDEKNKSLKEA 263 (280)
Q Consensus 231 HaYtRYLGD-LSGGQiI----~r~---------------~Ldeeek~~iIeEA 263 (280)
|.-.++.+. |||||-= ++. +||.+.+..+++--
T Consensus 134 ~~~~~~~~~~LSgGqkQrv~iAraL~~~p~lllLDEPts~LD~~~~~~l~~~l 186 (250)
T 2d2e_A 134 SYLSRYLNEGFSGGEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGV 186 (250)
T ss_dssp GGGGSBTTCC----HHHHHHHHHHHHHCCSEEEEECGGGTTCHHHHHHHHHHH
T ss_pred hHhcCCcccCCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHH
Confidence 445678888 9999931 111 89999998887643
No 50
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=20.85 E-value=72 Score=25.45 Aligned_cols=39 Identities=8% Similarity=0.136 Sum_probs=15.7
Q ss_pred HhHHHHHHhhhcccchhhhcc----------CCCHHHHHHHHHHHHHHH
Q 023558 229 LSHFYNIYFSHVAGGQVIERQ----------HWTRDEKNKSLKEAAKSF 267 (280)
Q Consensus 229 VAHaYtRYLGDLSGGQiI~r~----------~Ldeeek~~iIeEA~~AF 267 (280)
+|||....||.|-.-|+-... +.++++++.++++...+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~MP~i~i~tnv~~~~~~~~~l~~~ls~~l 49 (135)
T 3t5s_A 1 MAHHHHHHMGTLEAQTQGPGSMPCAIVTTNADFTKDQADAFCLDMGQVL 49 (135)
T ss_dssp --------------------CCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_pred CCccccccccceeecccCCCCcceEEEEecCccchhccchhHHHHHHHH
Confidence 489999999999877654443 788899999999987764
No 51
>3mb2_B 4-oxalocrotonate tautomerase family enzyme - beta; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=20.82 E-value=73 Score=24.06 Aligned_cols=19 Identities=26% Similarity=0.204 Sum_probs=17.7
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 023558 250 HWTRDEKNKSLKEAAKSFK 268 (280)
Q Consensus 250 ~Ldeeek~~iIeEA~~AF~ 268 (280)
+.|.|+|.++++|+..+|.
T Consensus 12 pRT~EQKralaeE~T~if~ 30 (72)
T 3mb2_B 12 PPDRTRKQAFAAEASAIFQ 30 (72)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999885
Done!