BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023559
(280 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/281 (76%), Positives = 240/281 (85%), Gaps = 2/281 (0%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+ENRIFVGGLSW++TERQLENAFDRFGKI+E Q+MLERD+GRPRGFGFIT+ADRRA
Sbjct: 1 MAGKEENRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
MDDAIREMHGR+FGDRVISVNKAQPK+GG+ SDHGYRGG + G G DRP GQD+C
Sbjct: 61 MDDAIREMHGRDFGDRVISVNKAQPKIGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQDEC 120
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRY 180
FKCGR GHWARDCPSA G GG GG SSRSRFGG G RGD GG RDRYIDDRYDGGRY
Sbjct: 121 FKCGRSGHWARDCPSAGGR-GGGGGLISSRSRFGGAGDRGDRFGGDRDRYIDDRYDGGRY 179
Query: 181 GDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGAR 240
GD+DR+DS+D+KYG RDRY SDRYPP GDR +GDRYGGSDRY NGYGK++GY+RDVG R
Sbjct: 180 GDKDRFDSRDNKYGGRDRYASDRYPPNGDRFSGDRYGGSDRYAQNGYGKDKGYDRDVGPR 239
Query: 241 AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 280
G+DRY SGGP R+D YR+R APYDRPSRG P SF+RY
Sbjct: 240 GGNDRYGSGGPQRNDRSSYRNRPAPYDRPSRGGHPSSFERY 280
>gi|356575516|ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
Length = 279
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/280 (73%), Positives = 225/280 (80%), Gaps = 1/280 (0%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+ENRIFVGGLSW VTERQLE+AF R+GKI+ECQIM+ERD+GRPRGFGFIT+ADRR
Sbjct: 1 MAGKEENRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRG 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
M+DAI+EMHGRE GDR+ISVNKAQPKMGG+ D GYRGG S G DR G QDDC
Sbjct: 61 MEDAIKEMHGREIGDRIISVNKAQPKMGGDDVDQGYRGGYSSGGRGSYGAGDRVG-QDDC 119
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRY 180
FKCGRPGHWARDCP A GGRG G SF SR RFG G GD LGG RDRY+DDRY+GGRY
Sbjct: 120 FKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFGAAGGNGDRLGGERDRYVDDRYEGGRY 179
Query: 181 GDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGAR 240
GDRDR+D++D KYGSRDRY SDRYP +GDR A DRYGG YP NGYGKERGY+R G R
Sbjct: 180 GDRDRFDNRDYKYGSRDRYASDRYPTSGDRFASDRYGGGSDYPQNGYGKERGYDRYGGPR 239
Query: 241 AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRPSFDRY 280
G+DRY SG RD+GR YR R PYDRPSRG RPS DRY
Sbjct: 240 GGADRYGSGMGGRDEGRSYRGRPGPYDRPSRGSRPSLDRY 279
>gi|255645278|gb|ACU23136.1| unknown [Glycine max]
Length = 279
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 205/280 (73%), Positives = 225/280 (80%), Gaps = 1/280 (0%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+ENRIFVGGLSW VTERQLE+AF R+GKI+ECQIM+ERD+GRPRGFGFIT+ADRR
Sbjct: 1 MAGKEENRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRG 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
M+DAI+EMHGRE GDR+ISVNKAQPKMGG+ D GYRGG S G DR G QDDC
Sbjct: 61 MEDAIKEMHGREIGDRIISVNKAQPKMGGDDVDQGYRGGYSSGGRGSYGAGDRVG-QDDC 119
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRY 180
FKCGRPGHWARDCP A GGRG G SF SR RFG G GD LGG RDRY+DDRY+GGRY
Sbjct: 120 FKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFGAAGGNGDRLGGERDRYVDDRYEGGRY 179
Query: 181 GDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGAR 240
GDRDR+D++D KYGSRDRY SDRYP +GDR A DRYGG YP NGYGKERGY+R G R
Sbjct: 180 GDRDRFDNRDYKYGSRDRYASDRYPTSGDRFASDRYGGGSDYPQNGYGKERGYDRYGGPR 239
Query: 241 AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRPSFDRY 280
G+DRY SG RD+GR YR R PYDRPSRG RPS DRY
Sbjct: 240 GGADRYGSGMGGRDEGRSYRGRPGPYDRPSRGFRPSLDRY 279
>gi|225448932|ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/281 (75%), Positives = 234/281 (83%), Gaps = 4/281 (1%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+ENRIFVGGLSW+VTERQLEN F RFGKIIE QIMLERD+GRPRGFGFITYADRR
Sbjct: 1 MAGKEENRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDTGRPRGFGFITYADRRG 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
M+DAIREMHGR+FGDR+ISVNKAQPKMG E DHGY GG S G G DR GQDDC
Sbjct: 61 MEDAIREMHGRDFGDRIISVNKAQPKMG-EDPDHGYNGGYSSGGRGSYGGGDRSAGQDDC 119
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRY 180
FKCGRPGHWARDCPS+ GGRG G F SRSRF G RGD GG RDRY++DRYDGGRY
Sbjct: 120 FKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGG--RGDRFGGERDRYMEDRYDGGRY 177
Query: 181 GDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGAR 240
GDRDR++S+D+KYG+RDRYV+DRY P+GDR +GDRYGGSDRYP NGYGK+RGY+RD R
Sbjct: 178 GDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPR 237
Query: 241 AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 280
G DRYA GG AR++GR YR+R PYDRP+RG RP SFDRY
Sbjct: 238 GGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 278
>gi|356536336|ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
Length = 279
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/280 (72%), Positives = 223/280 (79%), Gaps = 1/280 (0%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA K+ENRIFVGGLSW+VTERQLE+AF R+GKI+ECQIM+ERD+GRPRGFGFIT+ADRR
Sbjct: 1 MAAKEENRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRG 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
M+DAI+EMHGRE GDR+ISVNKAQPKMGG+ +D GYRGG S G DR G QDDC
Sbjct: 61 MEDAIKEMHGREIGDRIISVNKAQPKMGGDDADQGYRGGYSSGGRGSYGAGDRVG-QDDC 119
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRY 180
FKCGRPGHWARDCP A GGRG G SF SR RFG G GD LGG RDRY+DDRYDGGRY
Sbjct: 120 FKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFGAAGGHGDRLGGERDRYVDDRYDGGRY 179
Query: 181 GDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGAR 240
GDRDR+D++D KYGSRDRY DRYP +GDR A DRYG YP NGYGKERGY+R G R
Sbjct: 180 GDRDRFDNRDYKYGSRDRYAGDRYPTSGDRFASDRYGAGSDYPQNGYGKERGYDRYSGPR 239
Query: 241 AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRPSFDRY 280
G+DRY SG RD+GR YR R PYDRPSRG R S DRY
Sbjct: 240 GGADRYGSGMGGRDEGRSYRGRPGPYDRPSRGSRSSLDRY 279
>gi|296085963|emb|CBI31404.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 211/297 (71%), Positives = 234/297 (78%), Gaps = 20/297 (6%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQ----------------IMLERDS 44
MAGK+ENRIFVGGLSW+VTERQLEN F RFGKIIE Q IMLERD+
Sbjct: 1 MAGKEENRIFVGGLSWDVTERQLENTFSRFGKIIESQFIFCQICSSFSFELVFIMLERDT 60
Query: 45 GRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSG 104
GRPRGFGFITYADRR M+DAIREMHGR+FGDR+ISVNKAQPKMG E DHGY GG S G
Sbjct: 61 GRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMG-EDPDHGYNGGYSSGG 119
Query: 105 GRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLG 164
G DR GQDDCFKCGRPGHWARDCPS+ GGRG G F SRSRF G RGD G
Sbjct: 120 RGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGG--RGDRFG 177
Query: 165 GGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPV 224
G RDRY++DRYDGGRYGDRDR++S+D+KYG+RDRYV+DRY P+GDR +GDRYGGSDRYP
Sbjct: 178 GERDRYMEDRYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRYGGSDRYPQ 237
Query: 225 NGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 280
NGYGK+RGY+RD R G DRYA GG AR++GR YR+R PYDRP+RG RP SFDRY
Sbjct: 238 NGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 294
>gi|255585355|ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 276
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/281 (72%), Positives = 229/281 (81%), Gaps = 6/281 (2%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+ENRIFVGGLSW+VTERQLENAF+R+GKI+ECQ+MLERD+GRPRGFGFIT++DRR+
Sbjct: 1 MAGKEENRIFVGGLSWDVTERQLENAFNRYGKIVECQVMLERDTGRPRGFGFITFSDRRS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
MDDAIREMHGREFGDRVISVNKAQPKMG ++ G S G G YG DRP GQD+C
Sbjct: 61 MDDAIREMHGREFGDRVISVNKAQPKMGDDLDHGYRGGYSSSGGRGGGYGGDRPLGQDEC 120
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRY 180
FKCGR GHWARDC ++ GGRGG G SFSSRSR GG RGD G RDR++DDRYDGGR+
Sbjct: 121 FKCGRIGHWARDC-TSAGGRGGGGSSFSSRSRLGGASERGDRFAGDRDRFMDDRYDGGRF 179
Query: 181 GDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDVGAR 240
GDRDR+DS+D KY SRDRY S+RYPP+GDR A DRYGGSDRY N YGK+RGYERD R
Sbjct: 180 GDRDRFDSRD-KY-SRDRYASERYPPSGDRFASDRYGGSDRYAHNSYGKDRGYERDAVTR 237
Query: 241 AGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 280
GSDRY +GGP D R YRSR PY+RPSRG P SF+RY
Sbjct: 238 GGSDRYGNGGPRGD--RSYRSRPGPYERPSRGGHPSSFERY 276
>gi|449449318|ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202917 [Cucumis sativus]
gi|449487254|ref|XP_004157539.1| PREDICTED: uncharacterized protein LOC101231083 [Cucumis sativus]
Length = 286
Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 196/289 (67%), Positives = 225/289 (77%), Gaps = 12/289 (4%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAG++E RIFVGGLSW++TERQLENAF+RFGKII+ QIMLE+++GRPRGFGFIT++DRR
Sbjct: 1 MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH----GYRGGGYSSGGRGSYGADRPGG 116
MDDAIREMHG+EFG+R+ISVNKA+PKM GE DH G G G G DR
Sbjct: 61 MDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGDRSAR 119
Query: 117 QDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD 176
QD+CFKCGR GHWARDCPS GGRG G SF +RSR G RGD G +RY+DDRYD
Sbjct: 120 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAGDANRYVDDRYD 178
Query: 177 -GGRYGDRDRYD--SKDSKYGSRDRYVSDRYPPAGDRLAGDRYGG-SDRYPVNGYGKERG 232
GGR+GDRDR+D S+D+KYGSRDRYVSDRYPP GDR RY SDR+PVNGYGK+RG
Sbjct: 179 GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRG 238
Query: 233 YERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 280
Y RD G R G D+Y SGGPARD+GR YR+R APYDRP+RG RP SFDRY
Sbjct: 239 YYRDGGPR-GVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
>gi|449465308|ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED: uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 207/284 (72%), Positives = 234/284 (82%), Gaps = 5/284 (1%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA KDE RIFVGGLSWN++ERQLENAF RFGK++E QIMLERD+GRPRGFGFIT+ADRR
Sbjct: 1 MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRG 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY--GADRPGGQD 118
MDDAIREMHG+E G+R+ISVNKA+PKM G+ ++ G+RGGGYSSGGR S+ G DR GQD
Sbjct: 61 MDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQD 120
Query: 119 DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGG 178
+CFKCGRPGHWARDCPS GGRGG GSFSSRSRF G RGD GG RDRY+D+RY+GG
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDG-RGDRFGGDRDRYVDERYNGG 179
Query: 179 RYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAG-DRYGGSDRYPVNGYGKERGYERDV 237
RYGDRDR+D +D KYGSRDRY DRYP AGDR G DRY SDRYP NGY K+R Y+RD+
Sbjct: 180 RYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDRVYDRDI 239
Query: 238 GARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 280
G R+GSDRY SGGP R +GR YR R PYDRPSR RP S+DRY
Sbjct: 240 GPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDRY 283
>gi|147841866|emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
Length = 240
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/243 (73%), Positives = 199/243 (81%), Gaps = 4/243 (1%)
Query: 39 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG 98
MLERD+GRPRGFGFITYADRR M+DAIREMHGR+FGDR+ISVNKAQPKMG E DHGY G
Sbjct: 1 MLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKMG-EDPDHGYNG 59
Query: 99 GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV 158
G S G G DR GQDDCFKCGRPGHWARDCPS+ GGRG G F SRSRF G
Sbjct: 60 GYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRF--SGG 117
Query: 159 RGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGG 218
RGD GG RDRY++DRYDGGRYGDRDR++S+D+KYG+RDRYV+DRY P+GDR +GDRYGG
Sbjct: 118 RGDRFGGERDRYMEDRYDGGRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDRFSGDRYGG 177
Query: 219 SDRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRGDRP-SF 277
SDRYP NGYGK+RGY+RD R G DRYA GG AR++GR YR+R PYDRP+RG RP SF
Sbjct: 178 SDRYPQNGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSF 237
Query: 278 DRY 280
DRY
Sbjct: 238 DRY 240
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/280 (59%), Positives = 195/280 (69%), Gaps = 18/280 (6%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E+RIFVGGLSW+VTERQLE+ FDR+GKI ECQIM+ +D+GRPRGFGFIT+ DRR D+AI
Sbjct: 11 ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGKDTGRPRGFGFITFTDRRGADEAI 70
Query: 66 REMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGR 125
+ MHGRE GDRVISVNKA+PK+GG+ DH +GGGYSS G+GS +D+CFKC R
Sbjct: 71 KHMHGRELGDRVISVNKAEPKVGGDDVDHLQKGGGYSSRGKGS--------EDECFKCRR 122
Query: 126 PGHWARDCPSAVGGRGGAGGSFSSRSRFGGV-GVRGDY----LGGGRDRYI--DDRYDGG 178
PGHWARDCPS G G S + RSR G G R Y L RDRY+ DGG
Sbjct: 123 PGHWARDCPSTGGEGGRFRVSLAMRSRLGEFDGHRDRYGDRDLERERDRYMDGRRDRDGG 182
Query: 179 RYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGY-GKERGYERDV 237
RY RDR++S D KY +RD Y +RY P GDR DRYG + + N Y G+ER Y+RD
Sbjct: 183 RYSYRDRFESGD-KYEARDHYPFERYAPPGDRFVSDRYGMPEHHLENEYRGRERSYDRDR 241
Query: 238 GARAGSDRYASGGPARDDGRGYRSRAAPYDRPSR-GDRPS 276
AR SDRY + GP RD+GR YRSR PYDRPSR G RPS
Sbjct: 242 YARDTSDRYGAMGPIRDEGRPYRSRPGPYDRPSRAGGRPS 281
>gi|297806401|ref|XP_002871084.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
gi|297316921|gb|EFH47343.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 189/308 (61%), Positives = 220/308 (71%), Gaps = 29/308 (9%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA K+ +RIFVGGLS VTER LE AF RFG I++CQIMLERD+GR RGFGFIT+ADRRA
Sbjct: 1 MAAKEGSRIFVGGLSPEVTERDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSD-HGYRGG---GYSSGGRGSYGADRPG- 115
MD++IREMHGR+FGDRVISVN+A+PK+G + + HG RGG GYS G+GS+G G
Sbjct: 61 MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSVTGKGSFGGGGGGR 120
Query: 116 -GQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRS-RFGGVGVRGDYLGG-----GRD 168
+D+CFKCGR GHWARDCPSA GGRGG G FSSR+ FGG VR D R+
Sbjct: 121 VAEDECFKCGRVGHWARDCPSAAGGRGGPVGGFSSRAGAFGGSDVRVDRYADRDRYVDRE 180
Query: 169 RYIDDRYDG-GRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLA-GDRYG-GSDRYPVN 225
RYIDDRYDG R+G RDR+DS+++ Y RDRY SDRY DR A GDRY GSDRYP
Sbjct: 181 RYIDDRYDGAARFGARDRFDSREA-YIPRDRYASDRYAAQADRFAGGDRYSRGSDRYPPG 239
Query: 226 GYGKERGYERDVGARAGSDRYA---SGGPAR--DDGRGYRSRA-APYDRPSR----GDRP 275
Y K R +ERD AGSDRY +GGP R ++GRG+RSRA APY+RPSR G P
Sbjct: 240 SYDKARSFERDAVPSAGSDRYGGGRAGGPIRGGEEGRGFRSRAGAPYERPSRSGGGGAYP 299
Query: 276 S---FDRY 280
S FDRY
Sbjct: 300 SSSTFDRY 307
>gi|18406831|ref|NP_564759.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2462758|gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gi|26983818|gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
gi|62321068|dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 162/296 (54%), Positives = 188/296 (63%), Gaps = 38/296 (12%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G E+RIFVGGLSW+VTERQLE+ FDR+GKI ECQIM+ RD+GRPRGFGFIT+ DRR D
Sbjct: 8 GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFK 122
DAI+ MHGRE G++VISVNKA+PK+GGE D +GGGYSS G+G+ +D+CFK
Sbjct: 68 DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT--------EDECFK 119
Query: 123 CGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRY------------ 170
C RPGHWARDCPS R + RSR G + G RDRY
Sbjct: 120 CRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDI-------DGHRDRYGDRDLERERERE 172
Query: 171 --------IDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRY 222
DGGRY RDR+DS D KY RD Y +RY P GDR DRYG + +
Sbjct: 173 REFDRYMDGRRDRDGGRYSYRDRFDSGD-KYEPRDHYPFERYAPPGDRFVSDRYGMPEHH 231
Query: 223 PVNGY-GKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSR-GDRPS 276
N Y G+ER Y+RD AR SDRY GP RD+GR YRSR PYDRPSR G RPS
Sbjct: 232 LENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPS 287
>gi|15237666|ref|NP_196048.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|21387121|gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332003340|gb|AED90723.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 310
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/311 (59%), Positives = 214/311 (68%), Gaps = 32/311 (10%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA K+ +RIFVGGLS VT+R LE AF RFG I++CQIMLERD+GR RGFGFIT+ADRRA
Sbjct: 1 MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMG-GEVSDHGYRGG---GYSSG----GRGSYGAD 112
MD++IREMHGR+FGDRVISVN+A+PK+G + HG RGG GYS G G
Sbjct: 61 MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120
Query: 113 RPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSR-SRFGGVGVRGDYLGG-----G 166
G+D+CFKCGR GHWARDCPSA GGRGG G FSSR S +GG R D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180
Query: 167 RDRYIDDRYDG-GRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLA-GDRYG-GSDRYP 223
R+RYIDDRYDG RYG RDR+DS+++ Y RDRY SDRY DR A GDRY GSDRYP
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSREA-YIPRDRYASDRYAAPADRFAGGDRYSRGSDRYP 239
Query: 224 VNGYGKERGYERDVGARAGSDRYA---SGGPA---RDDGRGYRSRA-APYDRPSR----G 272
Y K R +ERD+ AGSDRY +GGP ++GRG+RSRA APY+RPSR G
Sbjct: 240 PGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGGGG 299
Query: 273 DRPS---FDRY 280
PS FDRY
Sbjct: 300 AYPSSSTFDRY 310
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/316 (50%), Positives = 186/316 (58%), Gaps = 49/316 (15%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+E+RIFVGGLS++ ER+LE AF RFGK+++ QIMLER + R RGFGF+T++D RA
Sbjct: 1 MAGKEESRIFVGGLSFHTDERKLEEAFRRFGKVVDAQIMLERHTNRHRGFGFVTFSDPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY--GADRPGGQD 118
++ AI EMH +E R ISVN+A+PKM D Y GG RG Y G
Sbjct: 61 VESAISEMHTKELDGRTISVNRAEPKM--NTDDTRYSSGGDRGADRGDYRGGKGDGPPPG 118
Query: 119 DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGG---RDRYIDDRY 175
+C++CGR GHWARDCP+ GGR G S+F G G RGD G DRY+DDRY
Sbjct: 119 NCYQCGRAGHWARDCPNPAGGRSG-----QLSSKFSGGGGRGDRFSGSDRFSDRYMDDRY 173
Query: 176 DGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYG--KERGY 233
DGGRYG RD D++D G RDRY SDRYP GDR DRYGG DRY +GYG +ER Y
Sbjct: 174 DGGRYGYRDPIDNRDRYDGGRDRYASDRYPSGGDRFGADRYGGPDRYQPSGYGRERERSY 233
Query: 234 ERDV----------GAR-------------------------AGSDRYASGGPARDDGRG 258
ERD G R G+D Y SGGPAR DG
Sbjct: 234 ERDAVRGGAAFDRSGPRGGASYDRDGPRGGIGGGYDRDGPRGGGADNYVSGGPARYDGGS 293
Query: 259 YRSRAAPYDRPSRGDR 274
YR R PYDRPSRG R
Sbjct: 294 YRDRPGPYDRPSRGGR 309
>gi|413933427|gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 311
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 184/313 (58%), Gaps = 51/313 (16%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M GK+E RIFVGGLSW ER+L++AF RFGK+++ QIMLER + R RGFGF+T+ DRRA
Sbjct: 1 MEGKEEGRIFVGGLSWQTDERKLQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTFEDRRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
+D AI+EM G+E R ISVNKA+PKM + + R G G +C
Sbjct: 61 VDSAIKEMRGQELDGRTISVNKAEPKMNTDDT----RFDSGGGRGEYRGGRGDGPPPGNC 116
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGG---RDRYIDDRYDG 177
++CGRPGHW RDCPSA GGR G F S+ GG RGD G DRY+DDRYDG
Sbjct: 117 YECGRPGHWVRDCPSAAGGR---SGRFPSKFSGGG---RGDRFSGSDRFNDRYMDDRYDG 170
Query: 178 GRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS-DRYPVNGYG--KERGYE 234
GRYG RD+ D++D G RDRY +DRYP GD GDRYGG DRY NGYG +ER YE
Sbjct: 171 GRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHFDGDRYGGGLDRYAPNGYGRERERSYE 230
Query: 235 RD----------VGARAG-------------------------SDRYASGGPARDDGRGY 259
RD G+R G +DRY GGPAR DG Y
Sbjct: 231 RDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGYVRDGPRGGVADRYGGGGPARYDGGSY 290
Query: 260 RSRAAPYDRPSRG 272
R R PYDRPSRG
Sbjct: 291 RERPGPYDRPSRG 303
>gi|326507358|dbj|BAK03072.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/309 (53%), Positives = 190/309 (61%), Gaps = 45/309 (14%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M K+ RIFVGGLSW+ TER LE AF FGK+IE Q++ ERD+GR RGFGF+T+++ RA
Sbjct: 1 MTEKEVGRIFVGGLSWDTTERTLERAFGEFGKVIETQVVTERDTGRSRGFGFVTFSEPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY--GAD-RPGGQ 117
+D AIREMH E R ISVNKAQP++ +GY G YSSG RG Y AD P
Sbjct: 61 VDVAIREMHNGELDGRTISVNKAQPRVNSNDGGYGYGGSSYSSGARGGYRGAADIVPAAS 120
Query: 118 DDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRF-GGVGVRGDYLGGG---RDRYIDD 173
DDCFKCGRPGHWAR+CP +VGGR G +S SR+ G G RGD GG +RY+DD
Sbjct: 121 DDCFKCGRPGHWARECPYSVGGR---PGRYSPPSRYVNGAGGRGDRFGGSDRFANRYVDD 177
Query: 174 RYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGY 233
RYDGGRY D DRY G R DRYPPA DR +GDRYGG DRY G+ +ER Y
Sbjct: 178 RYDGGRYAD-DRYG------GGR-----DRYPPAADRFSGDRYGGGDRYASGGFARERSY 225
Query: 234 ERDVGARAGS----------------------DRYASGGPARDDGRGYRSRAAPYDRPSR 271
ERD G GS DRY S GPAR G YR R APYDRP+R
Sbjct: 226 ERDGGRPGGSYYRDEPRGTGGYGRGGPRVANGDRYGSAGPARLGG-SYRDRPAPYDRPTR 284
Query: 272 GDRPSFDRY 280
G R +RY
Sbjct: 285 GARSYDERY 293
>gi|212275991|ref|NP_001130195.1| uncharacterized protein LOC100191289 [Zea mays]
gi|194688516|gb|ACF78342.1| unknown [Zea mays]
Length = 311
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 184/313 (58%), Gaps = 51/313 (16%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M GK+E RIFVGGLSW ER+L++AF RFGK+++ QIMLER + R RGFGF+T+ DRRA
Sbjct: 1 MEGKEEGRIFVGGLSWQTDERKLQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTFEDRRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
+D AI+EM G+E R ISVNKA+PKM + + R G G +C
Sbjct: 61 VDSAIKEMRGQESDGRTISVNKAEPKMNTDDT----RFDSGGGRGEYRGGRGDGPPPGNC 116
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGG---RDRYIDDRYDG 177
++CGRPGHW RDCPSA GGR G F S+ GG RGD G DRY+DDRYDG
Sbjct: 117 YECGRPGHWVRDCPSAAGGR---SGRFPSKFSGGG---RGDRFSGSDRFNDRYMDDRYDG 170
Query: 178 GRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS-DRYPVNGYG--KERGYE 234
GRYG RD+ D++D G RDRY +DRYP GD GDRYGG DRY NGYG +ER YE
Sbjct: 171 GRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHFDGDRYGGGLDRYAPNGYGRERERSYE 230
Query: 235 RD----------VGARAG-------------------------SDRYASGGPARDDGRGY 259
RD G+R G +DRY GGPAR DG Y
Sbjct: 231 RDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGYVRDGPRGGVADRYGGGGPARYDGGSY 290
Query: 260 RSRAAPYDRPSRG 272
R R PYDRPSRG
Sbjct: 291 RERPGPYDRPSRG 303
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/301 (52%), Positives = 182/301 (60%), Gaps = 36/301 (11%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M GK+E RIFVGGLSW ER+LE+AF RFGK+++ QIM+ER + R RGFGF+T+ DRRA
Sbjct: 1 MEGKEEGRIFVGGLSWQTDERKLEDAFGRFGKVVDAQIMVERHTNRHRGFGFVTFEDRRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
+D AI+EMHG+E R ISVNKA+PKM + + R G G G +C
Sbjct: 61 VDSAIKEMHGQEIDGRTISVNKAEPKMNTDDT----RYAGGGGRGEYRGGRGDGPPPGNC 116
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV-RGDYLGGGR---DRYIDDRYD 176
F+CGRPGHW RDCPSA GGR G S S GG GV RGD G DRY+DDRYD
Sbjct: 117 FECGRPGHWVRDCPSAAGGRSGRFPSKFS----GGSGVGRGDRFSGSDRFGDRYMDDRYD 172
Query: 177 GGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRY-GGSDRYPVNGYG--KERGY 233
GGRYG RD+ D++D G RDRY +DRYP GD GDRY GG D Y +GYG +ER Y
Sbjct: 173 GGRYGYRDQADARDRYAGGRDRYANDRYPSGGDHFGGDRYGGGPDCYVPSGYGRERERSY 232
Query: 234 ERDVGAR---AGSDRYASGGP-----------------ARDDGRGYRSRAAPYDRPSRGD 273
ERD G R G Y GP AR DG YR R PYDRPSRG
Sbjct: 233 ERD-GVRGGGGGGGGYDRSGPRGGGGYDRDGPRGGGGSARYDGGNYRERPGPYDRPSRGG 291
Query: 274 R 274
R
Sbjct: 292 R 292
>gi|225441175|ref|XP_002265930.1| PREDICTED: uncharacterized protein LOC100257264 [Vitis vinifera]
Length = 332
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 173/336 (51%), Positives = 200/336 (59%), Gaps = 60/336 (17%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M G++ENRIFVGGL WN +ER LE+AF R+GKI+E +M+ERD+GRPRGFGFIT+AD RA
Sbjct: 1 MGGREENRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSG---------------- 104
M+DAIREMHGRE RVISVNKAQPKMG E S +GY SG
Sbjct: 61 MEDAIREMHGRELDGRVISVNKAQPKMGSEDSGYGYGRDHMPSGRDHAPGGRDHATSGRD 120
Query: 105 --------------------------------GRGSY-GADRPGGQ-DDCFKCGRPGHWA 130
GR SY G D+P G+ DDCFKCGRPGHWA
Sbjct: 121 RISGGRDHMPGGRDHFPGGRDHFPGGRDRMLGGRDSYRGVDKPVGRSDDCFKCGRPGHWA 180
Query: 131 RDCPSAVGGRGGAGGSFSSRSR--FGGVGVRGDYLGGGRDRYIDDRYDGGRY-GDRDRYD 187
RDCPS G G GG FSS S+ GG G G DD +DGGRY GDR+R D
Sbjct: 181 RDCPSGDGV-GSGGGRFSSHSKFGGGGGGGGGGRGDRFGGDRYDDHFDGGRYGGDRERTD 239
Query: 188 SKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGY-GKERGYERDVGAR-AGSDR 245
S+D++YG RDRY +DRY P GDR GDRY DR NGY GK++GY R+ G R G
Sbjct: 240 SRDNRYG-RDRYNNDRYQPGGDRFGGDRY--MDRDTQNGYNGKDKGYNREGGPRGGGDKY 296
Query: 246 YASGGPARDDGRGYRSRAAPYDRPSRGDRP-SFDRY 280
+ GGPAR D YR R PYDR + RP S+DRY
Sbjct: 297 GSGGGPARFDRGSYRDRPGPYDRSRKAGRPSSYDRY 332
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/161 (78%), Positives = 137/161 (85%), Gaps = 1/161 (0%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+ENRIFVGGLSW++TERQLENAFDRFGKI+ECQ+MLERD+GRPRGFGFIT+ADRRAMDDA
Sbjct: 1 EENRIFVGGLSWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRAMDDA 60
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCG 124
IREMHGR+FGDRVISVNKAQPKMGG+ SDHGYRGG + G G DRP GQD+CFKCG
Sbjct: 61 IREMHGRDFGDRVISVNKAQPKMGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQDECFKCG 120
Query: 125 RPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGG 165
R GHWARDCPSA GG G SSRSRFGG G RGD GG
Sbjct: 121 RSGHWARDCPSAGARGGGGGLL-SSRSRFGGAGDRGDRFGG 160
>gi|115470953|ref|NP_001059075.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|50509452|dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113610611|dbj|BAF20989.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|222636576|gb|EEE66708.1| hypothetical protein OsJ_23377 [Oryza sativa Japonica Group]
Length = 308
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 180/312 (57%), Gaps = 41/312 (13%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA K+ RIFVGGLSW+ TER LE AF +GK+IE Q++LERD+GR RGFGF+T+++ RA
Sbjct: 1 MAEKEVGRIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR------- 113
+D AIR MH E R ISVNKAQP+M + GGG
Sbjct: 61 VDAAIRGMHNGELDGRTISVNKAQPRMNTDDGYGYGGGGGGGGTYSSGARGGYRGGGDAV 120
Query: 114 PGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGR-----D 168
P DDCFKCGR GHWAR+CP + GG GG G +S SR+G G G +
Sbjct: 121 PSANDDCFKCGRAGHWARECPYSSGGGGGRTGRYSPPSRYGSGTGGGRGDRFGGSDRFAN 180
Query: 169 RYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYG 228
RY+DDRYDGGRY D DRY G RDRY +DRYPP DR GDRYGGSDRY +G+
Sbjct: 181 RYVDDRYDGGRYVD-DRYGG-----GGRDRYATDRYPPTADRFTGDRYGGSDRYASSGFT 234
Query: 229 KERGYERDVGARAGS----------------------DRYASGGPARDDGRGYRSRAAPY 266
+ER YERD G GS DRY +GGPAR G YR R APY
Sbjct: 235 RERSYERDGGRSGGSYYRDEPRGSGGYDRGGMRMGSGDRYGTGGPARFAG-SYRDRPAPY 293
Query: 267 DRPSRGDRPSFD 278
DRPSR ++D
Sbjct: 294 DRPSRAAARTYD 305
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 168/303 (55%), Gaps = 73/303 (24%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA K+ RIFVGGLSW+ TER LE AF FGK+IE Q++ ERD+GR RGFGF+T+++ RA
Sbjct: 1 MAEKEVGRIFVGGLSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR---PGGQ 117
D AIREMH E R ISVNKAQP+M + +GY GGGYSSG RG Y P
Sbjct: 61 ADAAIREMHNGELDGRTISVNKAQPRMNTDDGGYGYGGGGYSSGARGGYRGAGDAVPAAS 120
Query: 118 DDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDG 177
DDCFKCGRPGHWAR+CP A GGR G+ RY DDRY
Sbjct: 121 DDCFKCGRPGHWARECPYADGGRPGS-------------------------RYADDRYSS 155
Query: 178 GRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYERDV 237
GR DRYPPA DR +GDRY G+DRY G+ +ER YERD
Sbjct: 156 GR----------------------DRYPPAADRFSGDRYAGADRYASGGFARERSYERDG 193
Query: 238 GARAGS----------------------DRYASGGPARDDGRGYRSRAAPYDRPSRGDRP 275
G GS DRY SGGPAR G YR R APYDRPSRG
Sbjct: 194 GRPGGSYYRDEPRATGGYGRGGPRVANGDRYGSGGPARFGG-SYRDRPAPYDRPSRGAAR 252
Query: 276 SFD 278
S+D
Sbjct: 253 SYD 255
>gi|242043176|ref|XP_002459459.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
gi|241922836|gb|EER95980.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
Length = 301
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 146/309 (47%), Positives = 176/309 (56%), Gaps = 56/309 (18%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA RIFVGGLSW+ TER LE F ++GK+IE Q+++ER++GR RGFGF+T+++ RA
Sbjct: 1 MAEDKVGRIFVGGLSWDTTERTLERTFGQYGKVIEAQVVVERETGRSRGFGFVTFSEPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGE---------VSDHGYRGGGYSSGGRGSYGA 111
+D AIR MH E R ISVNKAQP+ + GGY SGG
Sbjct: 61 VDAAIRGMHNGELDGRNISVNKAQPRNSDDGYGYGGGGGGGYSSGARGGYRSGGDVV--- 117
Query: 112 DRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRD--- 168
P DDCFKCGRPGHWAR+CP + G G G +S SR+GG GG D
Sbjct: 118 --PAASDDCFKCGRPGHWARECPYSDG--SGRTGRYSPASRYGGGTGGRGDRFGGSDRFA 173
Query: 169 RYIDDRYDGGRYGDRDRYDSKDSKYGS-RDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGY 227
RY DDRYDGGRY DS+D+ YG+ RDRY SDRY PA DR +GDRY G+DRY +G+
Sbjct: 174 RYDDDRYDGGRY-----VDSRDTYYGAGRDRYASDRYAPAADRYSGDRYSGADRYASSGF 228
Query: 228 GKERGYERDVGARAGSDRYASGGPARDD------------------------GRGYRSRA 263
+ER YERD G ++GG RDD G YR R
Sbjct: 229 ARERSYERDGGR-------SNGGYYRDDPRGTGGYGRGGSRGGGGGGGPARFGGSYRDRP 281
Query: 264 APYDRPSRG 272
APYDRPSRG
Sbjct: 282 APYDRPSRG 290
>gi|115454617|ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|31712074|gb|AAP68379.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108710427|gb|ABF98222.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|215692670|dbj|BAG88090.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625569|gb|EEE59701.1| hypothetical protein OsJ_12125 [Oryza sativa Japonica Group]
Length = 308
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 174/322 (54%), Gaps = 68/322 (21%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+E RIFVGGLS++ ER+L +AF RFGK+++ QIMLER + R RGFGF+T++D A
Sbjct: 1 MAGKEEGRIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
+D AI+EMH +E R ISVNKA+PKM + + R G G +C
Sbjct: 61 VDSAIKEMHCQELDGRTISVNKAEPKMNTDDT----RYESGGGRGEYRGGRGDGPPPGNC 116
Query: 121 FKCGRPGHWARDCPSAVGGR-----------GGAGGSFSSRSRFGGVGVRGDYLGGGRDR 169
F+CGR GHWARDCP+ GGR GG G FS RFG DR
Sbjct: 117 FECGRAGHWARDCPNPGGGRSARYSSSKFSAGGRGDRFSGSDRFG-------------DR 163
Query: 170 YIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYG- 228
Y+DDRYDGG R+ D +D G RDRY +DRYP GDR DRYGG DRY + YG
Sbjct: 164 YMDDRYDGGY---REPVDVRDRYGGGRDRYANDRYPSGGDRYVPDRYGGPDRYQPSSYGR 220
Query: 229 -KERGYERD-VGARAGSDRY----------------ASGG------------------PA 252
+ER YERD V G DR SGG PA
Sbjct: 221 ERERSYERDGVRGNGGYDRSGPRGGGSYDRDGPRGGISGGYDRDGPRGGGVDRYGGGGPA 280
Query: 253 RDDGRGYRSRAAPYDRPSRGDR 274
R DG YR R+ PYDRPSRG R
Sbjct: 281 RYDGGSYRDRSGPYDRPSRGGR 302
>gi|227206224|dbj|BAH57167.1| AT5G04280 [Arabidopsis thaliana]
Length = 272
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 160/273 (58%), Positives = 184/273 (67%), Gaps = 32/273 (11%)
Query: 39 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMG-GEVSDHGYR 97
MLERD+GR RGFGFIT+ADRRAMD++IREMHGR+FGDRVISVN+A+PK+G + HG R
Sbjct: 1 MLERDTGRSRGFGFITFADRRAMDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSR 60
Query: 98 GG---GYSSG----GRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSR 150
GG GYS G G G+D+CFKCGR GHWARDCPSA GGRGG G FSSR
Sbjct: 61 GGRDSGYSIAGKGSFGGGGGGGGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSR 120
Query: 151 -SRFGGVGVRGDYLGG-----GRDRYIDDRYDG-GRYGDRDRYDSKDSKYGSRDRYVSDR 203
S +GG R D R+RYIDDRYDG RYG RDR+DS+++ Y RDRY SDR
Sbjct: 121 ASAYGGSDGRVDRYADRDRYVDRERYIDDRYDGAARYGARDRFDSREA-YIPRDRYASDR 179
Query: 204 YPPAGDRLA-GDRYG-GSDRYPVNGYGKERGYERDVGARAGSDRYA---SGGPA---RDD 255
Y DR A GDRY GSDRYP Y K R +ERD+ AGSDRY +GGP ++
Sbjct: 180 YAAPADRFAGGDRYSRGSDRYPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEE 239
Query: 256 GRGYRSRA-APYDRPSR----GDRPS---FDRY 280
GRG+RSRA APY+RPSR G PS FDRY
Sbjct: 240 GRGFRSRAGAPYERPSRSGGGGAYPSSSTFDRY 272
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/155 (69%), Positives = 122/155 (78%), Gaps = 3/155 (1%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M G++ENRIFVGGL WN +ER LE+AF R+GKI+E +M+ERD+GRPRGFGFIT+AD RA
Sbjct: 1 MGGREENRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY-GADRPGGQ-D 118
M+DAIREMHGRE RVISVNKAQPKMG E S +GY G GGR SY G D+P G+ D
Sbjct: 61 MEDAIREMHGRELDGRVISVNKAQPKMGSEDSGYGYGGRDRMLGGRDSYRGVDKPVGRSD 120
Query: 119 DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRF 153
DCFKCGRPGHWARDCPS G G GG FSS S+F
Sbjct: 121 DCFKCGRPGHWARDCPSG-DGVGSGGGRFSSHSKF 154
>gi|218193515|gb|EEC75942.1| hypothetical protein OsI_13038 [Oryza sativa Indica Group]
Length = 261
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 149/249 (59%), Gaps = 33/249 (13%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+E RIFVGGLS++ ER+L +AF RFGK+++ QIMLER + R RGFGF+T++D A
Sbjct: 1 MAGKEEGRIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
+D AI+EMH +E R ISVNKA+PKM + + R G G +C
Sbjct: 61 VDSAIKEMHCQELDGRTISVNKAEPKMNTDDT----RYESGGGRGEYRGGRGDGPPPGNC 116
Query: 121 FKCGRPGHWARDCPSAVGGR-----------GGAGGSFSSRSRFGGVGVRGDYLGGGRDR 169
F+CGR GHWARDCP+ GGR GG G FS RFG DR
Sbjct: 117 FECGRAGHWARDCPNPGGGRSARYSSSKFSAGGRGDRFSGSDRFG-------------DR 163
Query: 170 YIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYG- 228
Y+DDRYDGG R+ D +D G RDRY +DRYP GDR DRYGG DRY + YG
Sbjct: 164 YMDDRYDGGY---REPVDVRDRYGGGRDRYANDRYPSGGDRYVPDRYGGPDRYQPSSYGR 220
Query: 229 -KERGYERD 236
+ER YERD
Sbjct: 221 ERERSYERD 229
>gi|226502460|ref|NP_001151678.1| LOC100285313 [Zea mays]
gi|195648731|gb|ACG43833.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|223972767|gb|ACN30571.1| unknown [Zea mays]
Length = 293
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 171/301 (56%), Gaps = 47/301 (15%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA + RIFVGGLSWN TER LE F ++GK+IE Q+++ER++GR RGFGF+T+++ RA
Sbjct: 1 MAEEKVGRIFVGGLSWNTTERTLERTFGQYGKVIEAQVVVERETGRSRGFGFVTFSEPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMG--GEVSDHGYRGGGYSSGGRGSYGAD-RPGGQ 117
+D AIR MH E R ISVNKA+P+ G G G GAD P
Sbjct: 61 VDAAIRGMHNGELDGRNISVNKAEPRNSDGYGYGGGGGGGYSSGGRGGYRSGADVVPAAS 120
Query: 118 DDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRD---RYIDDR 174
DDCFKCGRPGHWAR+CP + G G G +S SR+GG GG D RY DDR
Sbjct: 121 DDCFKCGRPGHWARECPYSDG--SGRTGRYSPGSRYGGGTGGRGDRFGGSDRFARYDDDR 178
Query: 175 YDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYE 234
YDGGRY DS+D+ YGS DRY PA +R +GDRY G+DRY +G+ +ER YE
Sbjct: 179 YDGGRY-----VDSRDTYYGS----GRDRYAPAAERYSGDRYSGADRYASSGFARERSYE 229
Query: 235 RDVGARAGSDRYASGGPARDD-----------------------GRGYRSRAAPYDRPSR 271
RD G ++GG RD+ G YR R APYDRPSR
Sbjct: 230 RDGGR-------SNGGYYRDEPRGTGGYGRGGSRGGGGGGPARFGGSYRDRPAPYDRPSR 282
Query: 272 G 272
G
Sbjct: 283 G 283
>gi|226502290|ref|NP_001150604.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640520|gb|ACG39728.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|414591943|tpg|DAA42514.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 316
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 168/317 (52%), Gaps = 56/317 (17%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA RIFVGGLSW TER LE F ++G +IE Q++++R++GR RGFGF+T+++ RA
Sbjct: 1 MAEDKVRRIFVGGLSWKTTERTLERTFGQYGNVIEAQVVVKRETGRSRGFGFVTFSEPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKM--------------GGEVSDHGYRGGG------ 100
+D AIR MH E R ISVNKA P++ + GYR GG
Sbjct: 61 VDAAIRGMHNAELDGRNISVNKAHPRIADDDYGYGGGGGGGYSSGARGGYRSGGDVVPAV 120
Query: 101 ----YSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGV 156
+ G G P D+CFKCGR GHWAR+CP + G G G +S SR+GG
Sbjct: 121 SDECFKCGHSGHDVV--PAVSDECFKCGRSGHWARECPYSDG--SGRTGRYSPASRYGGG 176
Query: 157 GVRGDYLGGGRD---RYIDDRYDGGRYGDRDRYDSKDSKYGS-RDRYVSDRYPPAGDRLA 212
GG D RY DDRYDGGR DS+D+ YG+ RDRY DR+ PA D +
Sbjct: 177 AGGRGDRVGGSDRFARYDDDRYDGGR-----SVDSRDTYYGAGRDRYARDRHLPATDHHS 231
Query: 213 GDRYGGSDRYPVNGYGKERGYERDVGARAGSDRYASGGP-----------------ARDD 255
GDRY G+DRY +G+ ER YERD G G+ Y P
Sbjct: 232 GDRYSGADRYTSSGFAIERSYERDGGRSTGT--YYRDDPRGTGGYGRGGSRGGGGGPARF 289
Query: 256 GRGYRSRAAPYDRPSRG 272
G YR R APYDRPSRG
Sbjct: 290 GGSYRDRPAPYDRPSRG 306
>gi|413933428|gb|AFW67979.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 273
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/275 (48%), Positives = 153/275 (55%), Gaps = 51/275 (18%)
Query: 39 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG 98
MLER + R RGFGF+T+ DRRA+D AI+EM G+E R ISVNKA+PKM + + R
Sbjct: 1 MLERHTYRHRGFGFVTFEDRRAVDSAIKEMRGQELDGRTISVNKAEPKMNTDDT----RF 56
Query: 99 GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV 158
G G +C++CGRPGHW RDCPSA GGR G F S+ GG
Sbjct: 57 DSGGGRGEYRGGRGDGPPPGNCYECGRPGHWVRDCPSAAGGRSG---RFPSKFSGGG--- 110
Query: 159 RGDYLGGG---RDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDR 215
RGD G DRY+DDRYDGGRYG RD+ D++D G RDRY +DRYP GD GDR
Sbjct: 111 RGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDARDKYGGGRDRYANDRYPAGGDHFDGDR 170
Query: 216 YGGS-DRYPVNGYG--KERGYERD----------VGARAG-------------------- 242
YGG DRY NGYG +ER YERD G+R G
Sbjct: 171 YGGGLDRYAPNGYGRERERSYERDGVRGGGGYDRSGSRGGGSYDRDGPRGGKGGGYVRDG 230
Query: 243 -----SDRYASGGPARDDGRGYRSRAAPYDRPSRG 272
+DRY GGPAR DG YR R PYDRPSRG
Sbjct: 231 PRGGVADRYGGGGPARYDGGSYRERPGPYDRPSRG 265
>gi|414872129|tpg|DAA50686.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 259
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 151/263 (57%), Gaps = 36/263 (13%)
Query: 39 MLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG 98
M+ER + R RGFGF+T+ DRRA+D AI+EMHG+E R ISVNKA+PKM + + R
Sbjct: 1 MVERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVNKAEPKMNTDDT----RY 56
Query: 99 GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV 158
G G G +CF+CGRPGHW RDCPSA GGR G S S GG GV
Sbjct: 57 AGGGGRGEYRGGRGDGPPPGNCFECGRPGHWVRDCPSAAGGRSGRFPSKFS----GGSGV 112
Query: 159 -RGDYLGGGR---DRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 214
RGD G DRY+DDRYDGGRYG RD+ D++D G RDRY +DRYP GD GD
Sbjct: 113 GRGDRFSGSDRFGDRYMDDRYDGGRYGYRDQADARDRYAGGRDRYANDRYPSGGDHFGGD 172
Query: 215 RY-GGSDRYPVNGYG--KERGYERDVGAR---AGSDRYASGGP----------------- 251
RY GG D Y +GYG +ER YERD G R G Y GP
Sbjct: 173 RYGGGPDCYVPSGYGRERERSYERD-GVRGGGGGGGGYDRSGPRGGGGYDRDGPRGGGGS 231
Query: 252 ARDDGRGYRSRAAPYDRPSRGDR 274
AR DG YR R PYDRPSRG R
Sbjct: 232 ARYDGGNYRERPGPYDRPSRGGR 254
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 89/141 (63%), Gaps = 7/141 (4%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA K+ RIFVGGLSW+ TER LE AF +GK+IE Q++LERD+GR RGFGF+T+++ RA
Sbjct: 1 MAEKEVGRIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR------- 113
+D AIR MH E R ISVNKAQP+M + GGG
Sbjct: 61 VDAAIRGMHNGELDGRTISVNKAQPRMNTDDGYGYGGGGGGGGTYSSGARGGYRGGGDAV 120
Query: 114 PGGQDDCFKCGRPGHWARDCP 134
P DDCFKCGR GHWAR+CP
Sbjct: 121 PSANDDCFKCGRAGHWARECP 141
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 149/278 (53%), Gaps = 42/278 (15%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R F+GGL+W ++R L +AF+++G ++E +++L++ SGR RGFGFIT+ +++A
Sbjct: 1 MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
MD+AI M+G + R I+V+KAQP GG D+ G R G DC
Sbjct: 61 MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGDC 120
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYI--DDRYDGG 178
FKCG+PGH+AR+CPS G GG FSS+ DRY DDRY
Sbjct: 121 FKCGKPGHFARECPSESSRDG--GGRFSSKD----------------DRYSSKDDRYGAK 162
Query: 179 --RYGDR-DRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGYGKERGYER 235
RYG + DRY +KD +Y S+D DRY DR G R GG R YG +R ER
Sbjct: 163 DDRYGAKEDRYGAKDDRYSSKD----DRYSSKDDRY-GSRDGGGSR-----YGPDRSGER 212
Query: 236 DVG-ARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRG 272
G +R G R A GG R APYDRP G
Sbjct: 213 AGGRSRDGGSRGAPGGE--------RHSRAPYDRPRAG 242
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 147/280 (52%), Gaps = 44/280 (15%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R F+GGL+W+ ++R L +AF+++G ++E +++L++ SGR RGFGFIT+ +++A
Sbjct: 1 MSEDPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHG---YRGGGYSSGGRGSYGADRPGGQ 117
MD+AI M+G + R I+V+KAQP GG DH R GY R G
Sbjct: 61 MDEAIAAMNGMDLDGRTITVDKAQPHQGGSGRDHDGDRSRDRGYD---RDRSRPSGGRGG 117
Query: 118 DDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDG 177
DCFKCG+PGH+AR+CPS SSR GGGR DDRY
Sbjct: 118 GDCFKCGKPGHFARECPSE-----------SSRD------------GGGRYSSKDDRYSA 154
Query: 178 G--RYGDR-DRYDSKDSKYGSRDRYVSDRYPPAGDR--LAGDRYGGSDRYPVNGYGKERG 232
RYG + DRY SKD +Y S+D DRY DR + DRYG D G G G
Sbjct: 155 KDDRYGAKEDRYGSKDDRYSSKD----DRYSAKDDRYGVKDDRYGSRD-----GGGSRYG 205
Query: 233 YERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSRG 272
+R G RAG G G + APYDRP G
Sbjct: 206 PDR-SGERAGGRSRDGGSRGGPGGERHSRATAPYDRPRAG 244
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 15/207 (7%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R F+GGL+W+ ++R L +AF+++G ++E +++L++ SGR RGFGFIT+ +++A
Sbjct: 1 MSEDPEYRCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHG---YRGG-GYSSGGRGSYGADRPGG 116
MD+AI M+G + R I+V+KAQP GG DH RG GY G R G
Sbjct: 61 MDEAIAAMNGMDLDGRTITVDKAQPHQGGSGRDHDGDRSRGDRGYDRDRSRPSGGGRGSG 120
Query: 117 QDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGG----VGVRGDYLGGGRDRY-- 170
DCFKCG+PGH+AR+CPS GG S R+ G G + D G DRY
Sbjct: 121 GGDCFKCGKPGHFARECPSETSRGGGGRYSGKD-DRYSGNDDRYGGKEDRYGAKEDRYGG 179
Query: 171 IDDRYDGGRYGDRDRYDSKDSKYGSRD 197
DDRY G DRY +KD +YG++D
Sbjct: 180 KDDRYSGK----DDRYSAKDDRYGAKD 202
>gi|357115606|ref|XP_003559579.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Brachypodium
distachyon]
Length = 160
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 90/150 (60%), Gaps = 15/150 (10%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAGK+E++IFVGGLSW TER +E AF RFGKI+ Q++ ER +GR RGFGF+ ++D RA
Sbjct: 1 MAGKEESQIFVGGLSWCTTERTVEGAFRRFGKIVHVQVITERHTGRSRGFGFVIFSDPRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKM-GGEVSDHGYRGGGYSSGGRGSYGADRPGGQDD 119
DAI MH +E I+V A PK+ + GY G G ++G G
Sbjct: 61 AIDAIMWMHNQELDGHTITVFWANPKVDNADGGRDGYCGSGRAAGFGGGC---------- 110
Query: 120 CFKCGRPGHWARDCPSAVGGRGGAGGSFSS 149
CF CGRPGHWA DCP A G G FSS
Sbjct: 111 CFACGRPGHWAPDCPDA----GRCSGRFSS 136
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA +E R FVGGLSWN T++ LE F FG ++E ++++++++G RGFGF+ + D R+
Sbjct: 1 MAEAEEFRCFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
M++AI +HG+E R I+VN+A+PK D GY GGG G G G G DC
Sbjct: 61 MEEAIERLHGKELDGRPITVNRAKPKGRDGGGDRGYGGGGGGGRGGGGGGGGG--GGGDC 118
Query: 121 FKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRF 153
FKCG+PGHWAR+CPS+ GG GAGG +S R R+
Sbjct: 119 FKCGQPGHWARECPSS-GGDRGAGGRYSGRDRY 150
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 96/148 (64%), Gaps = 6/148 (4%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ +E R F+GGLSW+ ++R L+ AF++FG ++E ++++++ SGR RGFGF+++ D++A
Sbjct: 1 MSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG------EVSDHGYRGGGYSSGGRGSYGADRP 114
M+DAI+EMHG + R I+V+KAQP G + R YG R
Sbjct: 61 MEDAIKEMHGMDLDGRSITVDKAQPNQGSGRDRDGDRDRDRGRDRYNDRDRNRDYGGGRG 120
Query: 115 GGQDDCFKCGRPGHWARDCPSAVGGRGG 142
+CFKCG+PGH+AR+CPS+ G RGG
Sbjct: 121 SNGGECFKCGKPGHFARECPSSEGARGG 148
>gi|147817638|emb|CAN64497.1| hypothetical protein VITISV_004037 [Vitis vinifera]
Length = 480
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 83/151 (54%), Gaps = 50/151 (33%)
Query: 34 IECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSD 93
+ ++M+ERD+GRPRGFGFIT+AD RAM+DAIREMHGRE RVISVNKAQPKMG E S
Sbjct: 177 LNTKVMMERDTGRPRGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPKMGSEDSG 236
Query: 94 HGYRGGGYSSG------------------------------------------------G 105
+GY SG G
Sbjct: 237 YGYGRDHMPSGRDHAPGGRDHATSGRDRISGGRDHMPGGRDHFPGGRDHFPGGRDRMLGG 296
Query: 106 RGSY-GADRPGGQ-DDCFKCGRPGHWARDCP 134
R SY G D+P G+ DDCFKCGRPGHWARDCP
Sbjct: 297 RDSYRGVDKPVGRSDDCFKCGRPGHWARDCP 327
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA + E R F+GGLSW+ ++R L+ AF++FG ++E ++++++ SGR RGFGF+T+ +++A
Sbjct: 1 MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR---GGGYSSGGRGSYGADRPGGQ 117
MD+AI+ M+G + R I+V+KAQP G G R G + +G R
Sbjct: 61 MDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRDHDRDRGRDFGGARGSNS 120
Query: 118 DDCFKCGRPGHWARDCPS 135
DCFKCG+PGH+AR+CPS
Sbjct: 121 GDCFKCGKPGHFARECPS 138
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ DE R F+GGL+W+ ++R+L++AF++FGK+ E ++++++ SGR RGFGF+T+ D++A
Sbjct: 1 MSDVDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK--------MGGEVSDHGYRGGGYSSGGRGSYGAD 112
MD+AI M+G + R I+V+KAQP+ R + YG
Sbjct: 61 MDEAIDAMNGMDLDGRTITVDKAQPQGSSRDRDDGDRYRERGRDRDDRGNRDRSRGYGGS 120
Query: 113 RPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV--RGDYLGGGRDRY 170
R +CFKCG+PGH+AR+CPS GG G SRS GG G D GGR
Sbjct: 121 RGSNGGECFKCGKPGHFARECPSEGERGGGRYGGRESRSSGGGYGPDRNADRSSGGR--- 177
Query: 171 IDDRYDGGRYGD--RDRY 186
DGG +GD DRY
Sbjct: 178 --SSRDGGSHGDSGSDRY 193
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 95/151 (62%), Gaps = 13/151 (8%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA DE R F+G LSW+ T+ L++AF +FG + E +++L++ SGR RGF F+T+ +++
Sbjct: 1 MADVDEYRCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKD 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGE--------VSDHGYRG--GGYSSGGRGSYG 110
M+ AI +M+G + R I+V+KAQP+ G D G R G S GGR G
Sbjct: 61 MEAAIEDMNGLDLDGRAITVDKAQPQGAGRDRNGDRDYDRDRGSRNDRGRDSGGGRAPRG 120
Query: 111 ADRPGGQDDCFKCGRPGHWARDCPSAVGGRG 141
+ GG DCFKCG+PGH+AR+CP GGRG
Sbjct: 121 S---GGGGDCFKCGKPGHFARECPDGDGGRG 148
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 111/198 (56%), Gaps = 17/198 (8%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ DE R F+GGL+W+ ++R+L++AF++FGK+ E ++++++ SGR RGFGF+T+ D++A
Sbjct: 1 MSDVDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK--------MGGEVSDHGYRGGGYSSGGRGSYGAD 112
MD+AI M+G + R I+V+K QP+ R YG
Sbjct: 61 MDEAIDAMNGMDLDGRTITVDKTQPQGSSRDRDDGDRYRERGRDRDDRGDRDRSRGYGGS 120
Query: 113 RPGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGV--RGDYLGGGRDRY 170
R +CFKCG+PGH+AR+CPS GG G SRS GG G D GGR
Sbjct: 121 RGSNGGECFKCGKPGHFARECPSEGERGGGRYGGRESRSSGGGYGPDRNADRSSGGR--- 177
Query: 171 IDDRYDGGRYGD--RDRY 186
DGG +GD DRY
Sbjct: 178 --SSRDGGSHGDSGSDRY 193
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 92/142 (64%), Gaps = 6/142 (4%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ +E R F+GGLSW+ ++R L+ AF++FG ++E ++++++ SGR RGFGF+++ D++A
Sbjct: 1 MSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG------EVSDHGYRGGGYSSGGRGSYGADRP 114
M+DAI+EMHG + R I+V+KAQP G + R YG R
Sbjct: 61 MEDAIKEMHGMDLDGRSITVDKAQPNQGSGRDRDGDRDRDRGRDRYNDRDRNRDYGGGRG 120
Query: 115 GGQDDCFKCGRPGHWARDCPSA 136
+CFKCG+PGH+AR+CPS+
Sbjct: 121 SNGGECFKCGKPGHFARECPSS 142
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
Length = 163
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 93/162 (57%), Gaps = 35/162 (21%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE R FVGGLSW+ ++ LE++F +FG+I+E +++++R SGR RGFGF+T+AD+RAMD+A
Sbjct: 1 DEFRCFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEA 60
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHG----------------------------- 95
I +H +E RV++VNKA PK SD G
Sbjct: 61 IDRLHNKELDGRVVTVNKALPK-----SDTGGGMGFGDRDRDRDRDRDRDRDFDRGAGDR 115
Query: 96 YRGGGYSSGGRGSY-GADRPGGQDDCFKCGRPGHWARDCPSA 136
YR Y++ Y G G D CF+CGR GHWAR+CP +
Sbjct: 116 YRDREYAAPYSNGYAGRGDNNGNDSCFRCGRQGHWARECPVS 157
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ +E R F+GGL+W+ ++R+L++ F++FGK+IE ++++++ SGR RGFGF+T+ D++A
Sbjct: 1 MSDVEEYRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSD-HGYRGGGYSSGGRGSYGADRPGGQDD 119
MD+AI M+G + R I+V++AQP+ G D YR G G R +
Sbjct: 61 MDEAIDAMNGMDLDGRTITVDRAQPQQGSTGGDGDRYRDCGRDRDRDHGGGGGRGSNGGE 120
Query: 120 CFKCGRPGHWARDCPSAVGGRGGAGGSFSSR 150
CFKCG+PGH+AR+CPS G RGG G SR
Sbjct: 121 CFKCGKPGHFARECPSE-GSRGGKYGGRESR 150
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
Length = 166
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 37/164 (22%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE R FVGGLSW+ ++ LE++F +FG+I+E +++++R SGR RGFGF+T+AD+RAMD+A
Sbjct: 1 DEFRCFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEA 60
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHG----------------------------- 95
I +H +E RV++VNKA PK SD G
Sbjct: 61 IDRLHNKELDGRVVTVNKALPK-----SDTGGGMGFGDRDRDRDRDRDRDRDRDFDRGAG 115
Query: 96 --YRGGGYSSGGRGSY-GADRPGGQDDCFKCGRPGHWARDCPSA 136
YR Y++ Y G G D CF+CGR GHWAR+CP +
Sbjct: 116 DRYRDREYAAPYSNGYAGRGDNNGSDSCFRCGRQGHWARECPVS 159
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 121/209 (57%), Gaps = 13/209 (6%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R FVGGLSW+ ++R LE+AF +FG +IE +++++RD+GR RGFGF+T+ D+++
Sbjct: 1 MSDAPEYRCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK--MGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD 118
M+DAI MHG R I+V++A+PK GY G Y GG
Sbjct: 61 MEDAIDSMHGMSLDGRSITVDRARPKSDGEDRGDRGDRGDRGYGGGSGRGYSGGGGGGSS 120
Query: 119 DCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRS-RFGGVGVRGDYLGGGRDRYIDDRYDG 177
+CFKCG+ GH+AR+CP+ G RGG G + SRS R+GG G R G R +G
Sbjct: 121 ECFKCGQRGHFARECPNGDGYRGGGGDRYGSRSDRYGGGGSRSSKYGSDR--------NG 172
Query: 178 GRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
RYG R R S+ G DRY DR P
Sbjct: 173 DRYGGRSR--DGGSRSGKDDRYNRDRSGP 199
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 94/144 (65%), Gaps = 3/144 (2%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ DE R F+GGL+W+ ++R+L++AF+++GK++E ++++++ SGR RGFGF+T+ D+ A
Sbjct: 223 MSDTDEFRCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEA 282
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK--MGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD 118
M++AI M+G + R I+V+KAQP+ + YG R
Sbjct: 283 MEEAIEAMNGIDLDGRTITVDKAQPQGSRDDDDRHRERGRDSRDRNRSRDYGGSRGSNGG 342
Query: 119 DCFKCGRPGHWARDCPSAVGGRGG 142
+CFKCG+PGH+AR+CPS G RGG
Sbjct: 343 ECFKCGKPGHFARECPSE-GERGG 365
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA +E R FVGGLSWN T++ LE F RFG ++E ++++++++G RGFGF+ + D R+
Sbjct: 1 MAEVEEFRCFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQP---KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 117
MD+AI +HG+E R I+VN+A+P GG+ G GGG G G G GG
Sbjct: 61 MDEAIERLHGKELDGRPITVNRAKPKGRDGGGDRGGGGGGGGGGGGKGGGGGGGGGGGGG 120
Query: 118 DDCFKCGRPGHWARDCPS 135
DCFKCG+PGHWAR+CP+
Sbjct: 121 GDCFKCGQPGHWARECPT 138
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 92/138 (66%), Gaps = 6/138 (4%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R F+GGL+W ++R L +AF+++G ++E +++L++ SGR RGFGFIT+ +++A
Sbjct: 1 MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH-GYRG--GGYSSGGRGSYGADRPGGQ 117
MD+AI M+G + R I+V+KAQP GG D+ G RG GY R G
Sbjct: 61 MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYD---RDRSRPSGGRGG 117
Query: 118 DDCFKCGRPGHWARDCPS 135
DCFKCG+PGH+AR+CPS
Sbjct: 118 GDCFKCGKPGHFARECPS 135
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 126/232 (54%), Gaps = 30/232 (12%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + E R F+GGLSW+ ++R L+ AF++FG ++E ++++++ SGR RGFGF+T+ +++A
Sbjct: 1 MSEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG---EVSDHGYRGGGYSSGGRGSYGADRPGGQ 117
M++AI EM+G + R I+V+KAQP G D G R G GG
Sbjct: 61 MEEAIEEMNGMDLDGRTITVDKAQPHQGSGREHDGDRNRDRGRDRDQNRDHGGRRPSGGG 120
Query: 118 DDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDG 177
+CFKCG+PGH+AR+CPS GA GS R+GG DDRY G
Sbjct: 121 GECFKCGKPGHFARECPSE-----GAKGS-----RYGGR---------------DDRYSG 155
Query: 178 GRYGDRDRY--DSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGSDRYPVNGY 227
G G RY D ++G R++ R P DR DR G +R G+
Sbjct: 156 GGGGGGGRYGPDRNGDRFGGRNKDAGSRGGPGTDRYNRDRSGPYERRGSGGF 207
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ +DE R FVGGL+W+ ++R+L + F++FGK+ E ++++++ SGR RGFGF+TY +++
Sbjct: 1 MSDEDEYRCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKV 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
M+DAI M+G + R I+V++AQP+ G D G R Y R C
Sbjct: 61 MEDAIDAMNGIDLDGRTITVDRAQPQQ-GSARDDGDRYRERGRDRDRDYRGGRGSNDGGC 119
Query: 121 FKCGRPGHWARDCP 134
F CG+PGH+AR+CP
Sbjct: 120 FNCGKPGHFARECP 133
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ +E R F+GGL+W+ ++R+L++ F++FGK+IE ++++++ SGR RGFGF+T+ D++A
Sbjct: 1 MSDVEEFRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG---SYGADRPGGQ 117
MD+AI M+G + R I+V++AQP+ G D R G R
Sbjct: 61 MDEAIDAMNGIDLDGRTITVDRAQPQQGSTRDDGDRYRERGRDRDRNRDYGGGGGRGSNG 120
Query: 118 DDCFKCGRPGHWARDCP 134
+CFKCG+PGH+AR+CP
Sbjct: 121 GECFKCGKPGHFARECP 137
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 90/146 (61%), Gaps = 11/146 (7%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA DE R F+G LSW+ T+ L++AF +FG + E +++L++ SGR RGFGF+T+ +++A
Sbjct: 1 MADVDEYRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG-----------EVSDHGYRGGGYSSGGRGSY 109
M+DAI M+G + R I+V+KAQP+ G E RG Y G
Sbjct: 61 MEDAIEGMNGLDLDGRNITVDKAQPQGPGRDRNGDRDYDRERGSRYERGRDYGGGRAPRG 120
Query: 110 GADRPGGQDDCFKCGRPGHWARDCPS 135
G GG DCFKCG+PGH+AR+CPS
Sbjct: 121 GGGGGGGGGDCFKCGKPGHFARECPS 146
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 90/143 (62%), Gaps = 8/143 (5%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + E R F+GGLSW+ ++R L+ F++FG ++E ++++++ SGR RGFGF+T+ +++A
Sbjct: 1 MSEELEYRCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGE--------VSDHGYRGGGYSSGGRGSYGAD 112
M+DAI M+G + R I+V+KAQP+ G R G+ YG
Sbjct: 61 MEDAIEGMNGMDLDGRTITVDKAQPQQGSSRDLDGDRSRDRDRDRDRGHDRDRNRDYGGG 120
Query: 113 RPGGQDDCFKCGRPGHWARDCPS 135
R +CFKCG+PGH+AR+CPS
Sbjct: 121 RGSNSGECFKCGKPGHFARECPS 143
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K+E R F+GGLSW+ T+R LE AF +G IIE +++ +R++ R RGFGF+T+ D +M++
Sbjct: 2 KEEFRCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMEN 61
Query: 64 AIREMHGREFGDRVISVNKAQP-----KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD 118
AIR+MH +E R I+V+KA+P GG RG Y G G
Sbjct: 62 AIRKMHNQELEGRSITVSKAEPPRSGGGGGGGGGGGRDRGDRYDRDRERGGGGGGGGASG 121
Query: 119 DCFKCGRPGHWARDCPSAVGGRGGA 143
+CFKCG GHWARDCP G R G+
Sbjct: 122 NCFKCGNKGHWARDCPENGGDRYGS 146
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 93/145 (64%), Gaps = 10/145 (6%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA DE R F+G LSW+ T+ L++AF +FG + E +++L++ SGR RGFGF+T+ +++A
Sbjct: 1 MADVDEYRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG--EVSDHGY---RGGGYSSG-----GRGSYG 110
M+DAI M+G + R I+V+KAQP+ G D Y RG Y G GR G
Sbjct: 61 MEDAIEGMNGLDLDGRNITVDKAQPQGPGRDRNGDRDYDRERGSRYERGRDYGGGRAPRG 120
Query: 111 ADRPGGQDDCFKCGRPGHWARDCPS 135
GG DCFKCG+PGH+AR+CPS
Sbjct: 121 GGGGGGGGDCFKCGKPGHFARECPS 145
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 91/142 (64%), Gaps = 8/142 (5%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA +DE R FVG LSW+ T+ L++AF ++GK+ E ++++++ SGR RGF F+T+ +++A
Sbjct: 1 MADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGE--------VSDHGYRGGGYSSGGRGSYGAD 112
M++AI +M+G + R I+V+KAQP+ G D G RG G G
Sbjct: 61 MEEAIEDMNGLDLEGRAITVDKAQPQGVGRDRNGDRDFDRDRGSRGDRGRDYGGGRAPRG 120
Query: 113 RPGGQDDCFKCGRPGHWARDCP 134
GG DCFKCG+PGH+AR+CP
Sbjct: 121 GSGGGGDCFKCGKPGHFARECP 142
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K+E R F+GGLSW+ T+R LE AF +G IIE +++ +R++ R RGFGF+T+ D +M++
Sbjct: 2 KEEFRCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMEN 61
Query: 64 AIREMHGREFGDRVISVNKAQP------KMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQ 117
AIR+MH +E R I+V+KA+P GG RG Y G G
Sbjct: 62 AIRKMHNQELEGRSITVSKAEPPRSGGGGGGGGGGGGRDRGDRYDRDRERGGGGGGGGAS 121
Query: 118 DDCFKCGRPGHWARDCP 134
+CFKCG GHWARDCP
Sbjct: 122 GNCFKCGNKGHWARDCP 138
>gi|21954079|gb|AAK92787.2| putative RNA binding protein [Arabidopsis thaliana]
Length = 182
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 99/184 (53%), Gaps = 30/184 (16%)
Query: 115 GGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRY---- 170
G +D+CFKC RPGHWARDCPS R + RSR G + G RDRY
Sbjct: 2 GTEDECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDID-------GHRDRYGDRD 54
Query: 171 ----------------IDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 214
DGGRY RDR+DS D KY RD Y +RY P GDR D
Sbjct: 55 LEREREREREFDRYMDGRRDRDGGRYSYRDRFDSGD-KYEPRDHYPFERYAPPGDRFVSD 113
Query: 215 RYGGSDRYPVNGY-GKERGYERDVGARAGSDRYASGGPARDDGRGYRSRAAPYDRPSR-G 272
RYG + + N Y G+ER Y+RD AR SDRY GP RD+GR YRSR PYDRPSR G
Sbjct: 114 RYGMPEHHLENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPG 173
Query: 273 DRPS 276
RPS
Sbjct: 174 GRPS 177
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 8/142 (5%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA +E R F+G LSW+ T+ L++AF +FG + E +++ ++ SGR RGFGF+T+ +++A
Sbjct: 1 MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG--EVSDHGY---RGGGYSSGGRGSYGADRP- 114
M+DAI M+G + R I+V+KAQP+ G D Y RG Y G G P
Sbjct: 61 MEDAIEGMNGLDLDGRAITVDKAQPQGPGRDRNGDRDYDRDRGSRYDRGRDFGGGGRAPR 120
Query: 115 --GGQDDCFKCGRPGHWARDCP 134
GG DC+KCG+PGH+AR+CP
Sbjct: 121 GSGGGGDCYKCGKPGHFARECP 142
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 91/142 (64%), Gaps = 8/142 (5%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA +DE R FVG LSW+ T+ L++AF ++GK+ E ++++++ SGR RGF F+T+ +++A
Sbjct: 37 MADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKA 96
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGE--------VSDHGYRGGGYSSGGRGSYGAD 112
M++AI +M+G + R I+V+KAQP+ G D G RG G G
Sbjct: 97 MEEAIEDMNGLDLEGRAITVDKAQPQGVGRDRNGDRDFDRDRGSRGDRGRDYGGGRAPRG 156
Query: 113 RPGGQDDCFKCGRPGHWARDCP 134
GG DCFKCG+PGH+AR+CP
Sbjct: 157 GSGGGGDCFKCGKPGHFARECP 178
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 8/143 (5%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ +DE R F+G LSW+ ++R L++AF++FG +++ +++L++ SGR RGFGF+T+ D+RA
Sbjct: 1 MSEEDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG--------EVSDHGYRGGGYSSGGRGSYGAD 112
M+DAI M+G + R I+V+KAQP+ G R G G
Sbjct: 61 MEDAIEAMNGMDLDGRAITVDKAQPQQGSGRDFDNDRPRDRDRDRDRGRDRDRGGRDYGG 120
Query: 113 RPGGQDDCFKCGRPGHWARDCPS 135
G DC+ CG+PGH+AR+CPS
Sbjct: 121 GRGSGGDCYNCGKPGHFARECPS 143
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 109/216 (50%), Gaps = 48/216 (22%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ D+ R FVG LSWN T+ L++AF +FG++ E +++L++ SGR RGFGF+T+ D++A
Sbjct: 1 MSDADDYRCFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGG-----EVSDHGYRGGGYSSGGRGSYGADRPG 115
M++A+ M+G + R I+V +AQP+ G + G G G
Sbjct: 61 MEEAVEAMNGIDLDGRNITVERAQPQGSGRNRDGDRDYRGGGDRYGGGRDFGGGRGGGRG 120
Query: 116 GQDDCFKCGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRY 175
G DC+KCG+PGH+AR+CPS G
Sbjct: 121 GGGDCYKCGKPGHFARECPSGDG------------------------------------- 143
Query: 176 DGGRYGDR-DRYDSKDSKYGSRDRYVSDRYPPAGDR 210
G RYG R DRY S+D +Y SRD DRY DR
Sbjct: 144 -GDRYGSRDDRYSSRDDRYSSRD----DRYSSRDDR 174
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 90/145 (62%), Gaps = 6/145 (4%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ DE R FVG LSW+ T+ L++AF +FG++ E +++L++ SGR RGFGF+T+ D++A
Sbjct: 1 MSDADEYRCFVGSLSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK------MGGEVSDHGYRGGGYSSGGRGSYGADRP 114
M++A+ M+G + R I+V +AQP+ G G G G G
Sbjct: 61 MEEAVEAMNGIDLDGRNITVERAQPQGSGRDRDGDYRGGGGDYGRDRGRDFGGGRGGGGR 120
Query: 115 GGQDDCFKCGRPGHWARDCPSAVGG 139
GG DC+KCG+PGH+AR+CPS GG
Sbjct: 121 GGGGDCYKCGKPGHFARECPSGDGG 145
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 88/141 (62%), Gaps = 10/141 (7%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE R F+G LSW+ ++R L++AF++FG +++ +++L++ SGR RGFGF+T+ ++RAM+DA
Sbjct: 4 DEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGG----------EVSDHGYRGGGYSSGGRGSYGADRP 114
I M+G + R I+V+KAQP G + R G R G
Sbjct: 64 IEAMNGVDLDGRDITVDKAQPDKGSGRDFDSDRPRDRDRDRGRDRDRDRGSRDYGGGRGS 123
Query: 115 GGQDDCFKCGRPGHWARDCPS 135
GG DCF CG+PGH+AR+CPS
Sbjct: 124 GGGGDCFNCGKPGHFARECPS 144
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 83/145 (57%), Gaps = 15/145 (10%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGLSW T+R LE+AF +G +IE +++L+RD+ R RGFGF+T+ D +M DAI
Sbjct: 1 EFRCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAI 60
Query: 66 REMHGREFGDRVISVNKAQPK---------------MGGEVSDHGYRGGGYSSGGRGSYG 110
MHG++ R I+V+KAQPK D G G SGG G G
Sbjct: 61 DGMHGKDLDGRSITVSKAQPKSGGGGGGGGGRDRDGGRDGGRDGGGYGRRSGSGGGGGGG 120
Query: 111 ADRPGGQDDCFKCGRPGHWARDCPS 135
GG CFKCG GHWARDC S
Sbjct: 121 GGGGGGNGGCFKCGESGHWARDCTS 145
>gi|226528928|ref|NP_001149053.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195624344|gb|ACG34002.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 271
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 119/258 (46%), Gaps = 54/258 (20%)
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR-PGGQDDCFKCGR 125
E R + R I+VNKA+P++ G G + G G D P D+CFKCG
Sbjct: 6 ECIMRNWMARNITVNKAKPRIADYGYGGGGGGYSSGARGGYRSGGDVVPAVSDECFKCGL 65
Query: 126 PGHWARDCPSAVGGRGGAGGSFSSRSRFGG-VGVRGDYLGGGR--DRYIDDRYDGGRYGD 182
GHWAR CP + G G G +S SR+GG G GD GG RY DDRYDGGRY D
Sbjct: 66 SGHWARQCPYSDGS--GRTGRYSPASRYGGGTGRHGDRFGGSDRFARYDDDRYDGGRYVD 123
Query: 183 ---------RDRYDS---------------------KDSKYGSRDRYVSDRYPPAGDRLA 212
RDRY + S + RDRY +DR+PPA DR +
Sbjct: 124 SRDTYYGAGRDRYANDRHPPATDLYSGDRYSGADRYASSGFAGRDRYANDRHPPATDRYS 183
Query: 213 GDRYGGSDRYPVNGYGKERGYERDVGARAGS------------------DRYASGGPARD 254
GDRY G+ R +G+ +ER YERD G G+ GG
Sbjct: 184 GDRYSGARRSASSGFARERSYERDGGRSTGTYYRDVPRGTGGYGRGGSRGGSGGGGGPAR 243
Query: 255 DGRGYRSRAAPYDRPSRG 272
G YR R APYDRPSRG
Sbjct: 244 FGGSYRDRPAPYDRPSRG 261
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
Length = 135
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 62/85 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A DE R FVGGLSW T+R LE+AF +G +IE +++L+RD+ R RGFGF+T+ D +M
Sbjct: 3 AAVDEFRCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQPK 86
DAI MHG++ R I+V+KAQPK
Sbjct: 63 QDAIDGMHGKDLDGRSITVSKAQPK 87
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 65/84 (77%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAG +E R FVGGL+W T+ +LE AF FG++++ +++ +R++GR RGFGF+T+AD +
Sbjct: 1 MAGGEEFRCFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQ 84
M+ AI+EM+G+E R I+VN+AQ
Sbjct: 61 MNAAIKEMNGQELDGRNITVNQAQ 84
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 62/79 (78%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E R FVGGL+W T+ LE AF FG++++C+++ +R++GR RGFGF+T+AD +M++A
Sbjct: 3 EEFRCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEA 62
Query: 65 IREMHGREFGDRVISVNKA 83
I++M+G+E R I+VN+A
Sbjct: 63 IKDMNGKELDGRNITVNQA 81
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + L+ F +FG +I+ +I+ +R+SGR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQPK 86
EM+G+E RVI+VN+AQ +
Sbjct: 65 EEMNGKELDGRVITVNEAQSR 85
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 61/78 (78%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T+ LE AF FG++++C+++ +R++GR RGFGF+T+AD +M++AI
Sbjct: 1 EFRCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAI 60
Query: 66 REMHGREFGDRVISVNKA 83
++M+G+E R I+VN+A
Sbjct: 61 KDMNGKELDGRNITVNQA 78
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + L+ F +FG +I+ +I+ +R+SGR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
EM+G+E RVI+VN+AQ
Sbjct: 65 EEMNGKELDGRVITVNEAQ 83
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + L+ F +FG +I+ +I+ +R+SGR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
EM+G+E RVI+VN+AQ
Sbjct: 65 EEMNGKELDGRVITVNEAQ 83
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF FG+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF FG+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W +R L +AF FG+++E +I+ +R++GR RGFGF+T++D +AM
Sbjct: 3 SAEIEFRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQPK 86
DAI M+G+E R I+VN+AQ +
Sbjct: 63 MDAIEAMNGKELDGRNITVNQAQSR 87
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
Length = 117
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF FG+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W LE AF FG++I+ +++ +R++GR RGFGF+T++ +
Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 61/85 (71%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA + E FVGGL+W T+R L +AF +G++++ +I+ +R++GR RGFGF+T+ D ++
Sbjct: 1 MAAEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQP 85
M DAI M+G+E R I+VN+AQ
Sbjct: 61 MKDAISGMNGQELDGRNITVNEAQA 85
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LENAF +G+I++ +++ +R++GR RGFGF+T++
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
+M DAI M+G+E R I+VN+AQ +
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQSR 87
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 1 MAGKD--ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADR 58
MA D E R FVG LSWN +R LE AF FG+I++ +I+ +R++GR RGFGF+++++
Sbjct: 1 MAESDGAEYRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNE 60
Query: 59 RAMDDAIREMHGREFGDRVISVNKAQP 85
+AM DAI M+G+E R I VN+AQ
Sbjct: 61 QAMQDAIEGMNGKELDGRSIVVNEAQS 87
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF FG+I+E +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MAAADVEFRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+ R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQSR 87
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 169
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W ER LE AF +FG++++ +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G++ R I+VN+AQ
Sbjct: 61 SMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 60/79 (75%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGLSW +R L AF++FG++ + +I+ +R++GR RGFGF+T+A+ ++M DAI
Sbjct: 5 EYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
EM+G+E R I+VN+AQ
Sbjct: 65 DEMNGKELDGRSITVNEAQ 83
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LENAF +G+I++ +++ +R++GR RGFGF+T++
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LENAF +G+I++ +++ +R++GR RGFGF+T++
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LENAF +G+I++ +++ +R++GR RGFGF+T++
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LENAF +G+I++ +++ +R++GR RGFGF+T++
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LENAF +G+I++ +++ +R++GR RGFGF+T++
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W LE+AF FG++++ +++ +R++GR RGFGF+T++ +
Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + +LE F +FG++I+ +I+ +R++GR RGFGF+T+ D ++M DAI
Sbjct: 5 EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 64
Query: 66 REMHGREFGDRVISVNKAQP 85
EM+G+E R I+VN+AQ
Sbjct: 65 DEMNGKELDGRTITVNEAQS 84
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R FVGGL+W + LE F +FG++I+ +I+ +R++GR RGFGF+T+ D ++
Sbjct: 1 MSTDVEYRCFVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQ 84
M DAI EM+G+E R I+VN+AQ
Sbjct: 61 MRDAIEEMNGKELDGRSITVNEAQ 84
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LE AF ++G+++E +I+ +R++GR RGFGF+T+++ +
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M+DAI M+G+ R I+VN+AQ
Sbjct: 61 SMNDAIEGMNGQNLDGRNITVNEAQ 85
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 57/79 (72%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + LE F +FG +++ +I+ +R++GR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATQDHDLERTFSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
EM+G+E R I+VN+AQ
Sbjct: 65 EEMNGKELDGRTITVNEAQ 83
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 59/80 (73%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + LE AF +FG+I + +++ +R++GR RGFGF+T+A+ ++M DAI
Sbjct: 7 EYRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAI 66
Query: 66 REMHGREFGDRVISVNKAQP 85
EM+G++ R I+VN+AQ
Sbjct: 67 EEMNGQDIDGRNITVNEAQS 86
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 63/85 (74%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + E R FVGGL+W T++ L+ AF ++G+II+ +I+ +R++GR RGFGF+T+ + +A
Sbjct: 1 MSAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQP 85
M DAI M+G++ R I+VN+AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQS 85
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 63/85 (74%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + E R FVGGL+W T++ L+ AF ++G+II+ +I+ +R++GR RGFGF+T+ + +A
Sbjct: 1 MSAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQP 85
M DAI M+G++ R I+VN+AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQS 85
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 63/84 (75%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA + E R FVGGL+W T++ L+ AF ++G+II+ +I+ +R++GR RGFGF+T+ + +A
Sbjct: 1 MAAEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQ 84
M DAI M+G++ R I+VN+AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQ 84
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF ++G +++ +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEYRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMKDAIEGMNGQELDGRSITVNEAQ 85
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 60/85 (70%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA + E FVGGL+W T+R L +AF +G++++ +I+ +R++GR RGFGF+T+ D ++
Sbjct: 1 MAAEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQP 85
M +AI M+G E R I+VN+AQ
Sbjct: 61 MKEAISGMNGSELDGRNITVNEAQA 85
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 62/81 (76%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T+ +LE AF FG +I+ +++ +R++GR RGFGFIT+AD AM++AI
Sbjct: 1 EFRCFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAI 60
Query: 66 REMHGREFGDRVISVNKAQPK 86
+EM+G+E R I+VN+AQ +
Sbjct: 61 KEMNGKELDGRNITVNQAQSR 81
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
AM DAI M+G+E R I+VN+AQ
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W LE AF +G+I+E +++++R++GR RGFGF+T+A +AM DAI
Sbjct: 7 EYRCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAI 66
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G+ R I+VN+AQ
Sbjct: 67 EGMNGQNLDGRSITVNEAQS 86
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 1 MAGKDEN-RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D + R FVGGL+W R LE AF +G+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M+G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W T++ L AF ++G+I+E +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+ R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGQTLDGRNITVNEAQS 86
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGLSW+ +R L++AF FG++++ +++ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEFRCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+GR+ R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGRDLDGRNITVNRAQA 86
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+G E R FVGGL+W +R LE AF ++G +I+ +I+ +R++GR RGFGF+T+ D +AM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
DAI M+G++ R I+VN+AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+G E R FVGGL+W +R LE AF ++G +I+ +I+ +R++GR RGFGF+T+ D +AM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
DAI M+G++ R I+VN+AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+G E R FVGGL+W +R LE AF ++G +I+ +I+ +R++GR RGFGF+T+ D +AM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
DAI M+G++ R I+VN+AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+G E R FVGGL+W +R LE AF ++G +I+ +I+ +R++GR RGFGF+T+ D +AM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
DAI M+G++ R I+VN+AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM +AI M+G+E R I+VN+AQ
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM +AI M+G+E R I+VN+AQ
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM +AI M+G+E R I+VN+AQ
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM +AI M+G+E R I+VN+AQ
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM +AI M+G+E R I+VN+AQ
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 1 MAGKDEN-RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D + R FVGGL+W R LE AF +G+I+E +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
AM DAI M G+E R I+VN+AQ +
Sbjct: 61 AMRDAIEGMSGKELDGRNITVNEAQSR 87
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W LE AF ++G+II+ +I+ +R++GR RGFGF+T+AD +
Sbjct: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G++ R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGQDMDGRNITVNEAQS 86
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE R FVGGL+W + L++AF FG+I++ +I+ +R++GR RGFGF+T+A +M A
Sbjct: 2 DEYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAA 61
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I M+G+E R I+VN+AQ +
Sbjct: 62 IEGMNGKELDGRSITVNQAQSR 83
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W T++ L AF ++G+++E +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+ R ++VN+AQ
Sbjct: 61 SMKDAIEGMNGQTLDGRNVTVNEAQS 86
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF ++G +++ +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEYRCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G++ R I+VN+AQ
Sbjct: 61 SMRDAIEAMNGQDLDGRSITVNEAQS 86
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 60/84 (71%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W ++ LE AF +FG+I+E +I+ +R++GR RGFGF+T++ ++M
Sbjct: 3 SAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQP 85
DAI M+G+ R I+VN+AQ
Sbjct: 63 RDAIEGMNGQNLDGRNITVNEAQS 86
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 59/82 (71%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E R FVGGL+W ++ LENAF FG+I++ +++ +R++GR RGFGF+T+ +AM +A
Sbjct: 2 EEYRCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNA 61
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I M+G++ R ISVN AQ +
Sbjct: 62 INAMNGKDIDGRTISVNMAQAR 83
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 166
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF ++G++++ +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G++ R I+VN+AQ
Sbjct: 61 SMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum
tuberosum]
Length = 178
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G E R FVGGL+W T+ L AF ++G+++E +I+ +R++GR RGFGF+T+ D +AM
Sbjct: 2 GDVEYRCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 63 DAIREMHGREFGDRVISVNKAQP 85
DAI M+G++ R I+VN+AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQS 84
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 59/80 (73%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E R FVGGL+W ++ LE AF +FG+I +C+I+ +R++GR RGFGF+T++ +M +A
Sbjct: 3 EEYRCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNA 62
Query: 65 IREMHGREFGDRVISVNKAQ 84
I M+G++ R I+VN+AQ
Sbjct: 63 IEGMNGQDLDGRNITVNEAQ 82
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + LE AF +G I+E +I+ +R++GR RGFGF+T+A +M DAI
Sbjct: 7 EYRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAI 66
Query: 66 REMHGREFGDRVISVNKAQ 84
M+G+ R I+VN+AQ
Sbjct: 67 EGMNGQNLDGRNITVNEAQ 85
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 59/79 (74%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W LE AF ++G+I++ +I+ +R++GR RGFGF+T+A+ ++M+DAI
Sbjct: 5 EYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
M+G++ R I+VN+AQ
Sbjct: 65 EAMNGQDLDGRNITVNQAQ 83
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF ++G +++ +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEFRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G++ R I+VN+AQ
Sbjct: 61 SMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 60/83 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W ++ LE AF +FG+I+E +I+ +R++GR RGFGF+T++ ++M
Sbjct: 3 SAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
DAI M+G+ R I+VN+AQ
Sbjct: 63 RDAIEGMNGQNLDGRNITVNEAQ 85
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
AM +AI M+G+E R I+VN+AQ
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQ 85
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MAGKDEN-RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D R FVGGL+W T++ L AF ++G+++E +++ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+ R I+VN+AQ
Sbjct: 61 SMKDAIVGMNGQTLDGRNITVNEAQS 86
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I++ +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
+M DAI M+G+E R I+VN+AQ +
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 59/80 (73%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T+R L AF ++G+++E +I+ +R++GR RGFGF+T+ D ++M DAI
Sbjct: 5 EYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G++ R I+VN+AQ
Sbjct: 65 EGMNGQDLDGRNITVNEAQS 84
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 60/83 (72%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W +R L++AF FG+I+E +I+ +R++GR RGFGF+T++D ++M
Sbjct: 4 SAEVEYRCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSM 63
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
DAI M+G+ R I+VN AQ
Sbjct: 64 RDAIDAMNGKVLDGRNITVNPAQ 86
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T++ L +AF +FG+I++ +I+ +R++GR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQP 85
M G++ R I+VN+AQ
Sbjct: 65 EGMKGQDLDGRNITVNEAQS 84
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + LE AF ++G+I+E +I+ +R++GR RGFGF+T+A +
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+ R I+VN+AQ
Sbjct: 61 SMKDAIGAMNGQNLDGRNITVNEAQ 85
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +++ LE AF +G+++E +I+ +R++GR RGFGF+T+ + +
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+ R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +++ LE AF +G+++E +I+ +R++GR RGFGF+T+ + +
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
+M DAI M+G+ R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W ++ LE AF ++G+I+E +I+ +R++GR RGFGF+T+A +
Sbjct: 37 MASSDVEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQ 96
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+ R I+VN+AQ
Sbjct: 97 SMKDAIEGMNGQNLDGRNITVNEAQ 121
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E+R FVGGL+W LE AF ++G+I++ +I+ +R++GR RGFGF+T+A+ ++M+D I
Sbjct: 5 EDRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
M+G++ R I+VN+AQ
Sbjct: 65 EAMNGQDLDGRNITVNQAQ 83
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria
sulphuraria]
Length = 148
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 61/82 (74%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
++NR+FVGGL W+++E L+ F ++G++++ +++++R++GR RGFGFI+YA+ ++D+
Sbjct: 3 EDNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDEC 62
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I + G++ R I VNKA +
Sbjct: 63 IAALDGQDLQGRTIRVNKAMTR 84
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T++ L AF +FG+I++ +I+ +R++GR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
M+G++ R I+VN+AQ
Sbjct: 65 EGMNGQDLDGRNITVNEAQ 83
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + LE AF +FG I + +I+ +R++GR RGFGF+T+ D ++M DAI
Sbjct: 5 EYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G+E R I+VN+AQ
Sbjct: 65 EGMNGQELDGRNITVNEAQS 84
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W T+ L AF +G I+E +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEK 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+ R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I++ +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I++ +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica
Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W +R LE AF +G+I++ +I+ +R++GR RGFGF+T++ +
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+E R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 60/85 (70%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M + E R FVGGL+W ++ LE AF +G+++E +I+ +R++GR RGFGF+T++ +A
Sbjct: 1 MDAEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQP 85
M DAI M+G++ R I+VN+AQ
Sbjct: 61 MRDAIEGMNGQDLDGRNITVNEAQS 85
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W+ +R L+ AF +G+++E +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MASADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+ R I+VN AQ
Sbjct: 61 SMRDAIDAMNGKMLDGRSITVNPAQ 85
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 6 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 65
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 66 AMRSAIEGMNGKELDGRNITVNEAQS 91
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 58/81 (71%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W ++ L+NAF ++G +I+ +I+ +R++GR RGFGF+T+A AM AI
Sbjct: 5 EYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 64
Query: 66 REMHGREFGDRVISVNKAQPK 86
M+G++ R I+VN+AQ +
Sbjct: 65 EAMNGQDLDGRNITVNEAQSR 85
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 3 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 62
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 63 AMRSAIEGMNGKELDGRNITVNEAQS 88
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 4 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXX 63
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 64 AMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 58/81 (71%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E FVGGL+W T+R L +AF +G++++ +I+ +R++GR RGFGF+T+ D + M DAI
Sbjct: 5 EYSCFVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQPK 86
M+G+E R I+VN+AQ +
Sbjct: 65 EGMNGQELDGRSITVNEAQAR 85
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 4 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 63
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 64 AMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 4 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 63
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 64 AMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 5 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 64
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 65 AMRSAIEGMNGKELDGRNITVNEAQS 90
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T++ L+ AF ++G+II+ +I+ +R++GR RGFGF+T+ + +AM DAI
Sbjct: 5 EYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G++ R I+VN+AQ
Sbjct: 65 DGMNGQDLDGRNITVNEAQS 84
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W LE AF +FG+I+E +++ +R++GR RGFGF+T+A +AM
Sbjct: 3 SAEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQP 85
DAI M+G+ R I+VN+AQ
Sbjct: 63 RDAIEGMNGQNLDGRNITVNEAQS 86
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 56/79 (70%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+ ++TE + ++ F +FGK++E QIM +R++GR RGFGFIT+ +A+++ I +
Sbjct: 130 KVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQ 189
Query: 68 MHGREFGDRVISVNKAQPK 86
E G + + + KA+PK
Sbjct: 190 GRMLELGGKQVEIKKAEPK 208
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGLS + T F ++G++ + IM +R +G+PRGFGF+TYAD +D I++
Sbjct: 43 KIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQD 102
Query: 68 MH 69
H
Sbjct: 103 KH 104
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 60/79 (75%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T++ L +AF ++G+I++ +I+ +R++GR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
M+G++ R I+VN+AQ
Sbjct: 65 EGMNGQDLDGRNITVNEAQ 83
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+IFVGGLSW+ + L AF+RFG + E +++ +RD+GR RGFGF+T+A+ AI
Sbjct: 3 NKIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIE 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
EM G E R I VN+AQ +
Sbjct: 63 EMDGVELDGRNIRVNEAQER 82
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L +AF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXX 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXX 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T++ L +AF ++G+I++ +I+ +R++GR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G++ R I+VN+AQ
Sbjct: 65 EGMNGQDLDGRNITVNEAQS 84
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 11 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 70
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 71 AMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 11 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 70
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 71 AMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 61/84 (72%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R FVGGL+W T++ L+ AF +G+I++ +I+ +R++GR RGFGF+T+ + ++
Sbjct: 1 MSADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQ 84
M DAI+ M+ +E R I+VN+AQ
Sbjct: 61 MRDAIQGMNSQELDGRNITVNEAQ 84
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
+ E R FVGGL+W + L+ AF ++G+I++ +I+ +R++GR RGFGF+T+ +M
Sbjct: 2 AETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
AI EM+G+E R I+VN+AQ +
Sbjct: 62 QAIEEMNGKELDGRNITVNEAQSR 85
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 61/85 (71%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W T++ L +AF ++ +++E +I+ +R++GR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQPKMGGE 90
M+ ++ R I+VN+AQ + G E
Sbjct: 65 EGMNRQDLDGRNITVNEAQSRGGVE 89
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W +R L++AF FG+II+ +I+ +R++GR RGFGF+T+A ++M DAI
Sbjct: 5 EYRCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAI 64
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G++ R I+VN+AQ
Sbjct: 65 EGMNGKDLDGRNITVNEAQS 84
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL ++TE +L++ F +GK++E QIML+ +GR RGFGF+T+ +++
Sbjct: 141 GPKTRKIFIGGLPPSLTEDELKDHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVE 200
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
I E R+ G + + + KA+PK G SDH SS GR S+G
Sbjct: 201 RVISEGRMRDLGGKQVEIKKAEPKKHG--SDH-------SSNGRSSHG 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 57 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 116
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 117 DH--VIDGRTVEVKRTVPR 133
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 8 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXD 67
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 68 AMRSAIEGMNGKELDGRNITVNEAQS 93
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG L+W+V ++QLE F GK+++ +++ +RDSGR RGFGF+TY+ + ++DAI
Sbjct: 204 NRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIE 263
Query: 67 EMHGREFGDRVISVNKAQ 84
+ G + G R I V+ A+
Sbjct: 264 SLDGVDLGGRAIRVSPAE 281
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVG L ++V L F+R G + +++ ++ +GR RGFGF+T + + A++ A ++
Sbjct: 100 KIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQ 159
Query: 68 MHGREFGDRVISVNK--AQPK----MGGEVSDHGYRGGG 100
+G E R + VN A PK G S G RGGG
Sbjct: 160 FNGYEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGG 198
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W ++ L+NAF ++G +I+ +I+ +R++GR RGFGF+T+A AM AI
Sbjct: 5 EYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
M+G++ R I+VN+AQ
Sbjct: 65 EAMNGQDLDGRNITVNEAQ 83
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W ++ L+NAF ++G +I+ +I+ +R++GR RGFGF+T+A AM AI
Sbjct: 5 EYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 64
Query: 66 REMHGREFGDRVISVNKAQ 84
M+G++ R I+VN+AQ
Sbjct: 65 EAMNGQDLDGRNITVNEAQ 83
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXED 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXX 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
+ E R FVGGL+W + L+ AF ++G+I++ +I+ +R++GR RGFGF+T+ +M
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
AI EM+G+E R I+VN+AQ +
Sbjct: 62 QAIEEMNGKELDGRSITVNEAQSR 85
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%)
Query: 12 GGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGR 71
GGL+W + LENAF +G+I++ +++ +R++GR RGFGF+T++ +M DAI M+G+
Sbjct: 88 GGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGK 147
Query: 72 EFGDRVISVNKAQ 84
E R I+VN+AQ
Sbjct: 148 ELDGRNITVNQAQ 160
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 58 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 117
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 118 AMRSAIEGMNGKELDGRNITVNEAQS 143
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 57/81 (70%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL W ++ L+NAF ++G +I+ +I+ +R++GR RGFGF+T+A AM AI
Sbjct: 5 EYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAI 64
Query: 66 REMHGREFGDRVISVNKAQPK 86
M+G++ R I+VN+AQ +
Sbjct: 65 EAMNGQDLDGRNITVNEAQSR 85
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W LE AF FG+IIE +I+ +R++GR RGFGF+T+++ +AM
Sbjct: 3 SAEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
DAI M+G+ R I+VN+AQ
Sbjct: 63 RDAIEGMNGQNLDGRNITVNEAQ 85
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W LE AF ++G+IIE +I+ +R++GR RGFGF+T+ +AM
Sbjct: 3 SAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQP 85
DAI M+G+ R I+VN+AQ
Sbjct: 63 RDAIEGMNGQNLDGRNITVNEAQS 86
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ + E R FVGGL+W LE AF ++G+IIE +I+ +R++GR RGFGF+T+ +AM
Sbjct: 3 SAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAM 62
Query: 62 DDAIREMHGREFGDRVISVNKAQP 85
DAI M+G+ R I+VN+AQ
Sbjct: 63 RDAIEGMNGQNLDGRNITVNEAQS 86
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
+ E R FVGGL+W + L+ AF ++G+I++ +I+ +R++GR RGFGF+T+ +M
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
AI EM+G+E R ++VN+AQ +
Sbjct: 62 QAIEEMNGKELDGRQVTVNEAQSR 85
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 55/80 (68%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++ AM AI
Sbjct: 1 EYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAI 60
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G+E R I+VN+AQ
Sbjct: 61 EGMNGKELDGRNITVNEAQS 80
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria
sulphuraria]
Length = 149
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 61/86 (70%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MA ++NR+FVGGL W+V E L F ++G++++ ++++ER++GR RGFGF++YA+ +
Sbjct: 1 MAAVEDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK 86
+++ I + G++ R I VNKA +
Sbjct: 61 VEECIAALDGQDMQGRTIRVNKAMSR 86
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W LE AF ++G ++E +I+ +R++GR RGFGF+T+A
Sbjct: 1 MASADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASED 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQ 84
+M DAI M+G+ R I+VN+AQ
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVG L+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MAASDVEYRCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AM AI M+G+E R I+VN+AQ
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 60/84 (71%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ E R FVGGL+W T++ L+ AF +G+I++ +I+ +R++GR RGFGF+T+ + ++
Sbjct: 1 MSADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKS 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQ 84
M DAI+ M+ +E R +VN+AQ
Sbjct: 61 MRDAIQGMNSQELDGRNTTVNEAQ 84
>gi|122890334|emb|CAJ74077.1| RNA recognition motif 1 [Guillardia theta]
Length = 199
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D ++FVGGLSW V ++QL AF FG E ++M++R SGR RGFGF+T+++ + A
Sbjct: 86 DPLKLFVGGLSWEVDDQQLMEAFQEFGNC-EAKVMVDRYSGRSRGFGFVTFSEEHSAAKA 144
Query: 65 IREMHGREFGDRVISVNKAQPKM 87
I EM+GRE R I+V A+ K+
Sbjct: 145 IEEMNGRELLGRQITVTHARQKI 167
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W LE AF +G I+E +++ +R++GR RGFGF+T+A +
Sbjct: 1 MASADVEFRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQ 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
+M DAI M+G++ R I+VN+AQ +
Sbjct: 61 SMKDAIAGMNGQDLDGRNITVNEAQTR 87
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ-------------------------------------PKMGGE 90
M+G+ + I V +A P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFRAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMHFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLYPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG RPS+
Sbjct: 293 SAP---PTRGPRPSY 304
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE+ L AF ++G I +C ++++R++GRPRGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I VN+A
Sbjct: 63 MEGMNGQSLDGRTIRVNEA 81
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE+ L AF ++G I +C ++++R++GRPRGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I VN+A
Sbjct: 63 MEGMNGQSLDGRTIRVNEA 81
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 56/77 (72%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R FVGGL+W +R LE AF +G+I++ +I+ +R++GR GFGFIT++ ++M DAI
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEG 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+E R I+VN+AQ
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE+ L AF ++G I +C ++++R++GRPRGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I VN+A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE+ L AF ++G I +C ++++R++GRPRGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I VN+A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 127/311 (40%), Gaps = 59/311 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ----------------------------------PKMGGEVSD 93
M+G+ + I V +A P GG + D
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDD 128
Query: 94 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSS 149
GY S RG + R PS + G GG
Sbjct: 129 GGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRAPVSRG 183
Query: 150 RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 209
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 184 RDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRD 237
Query: 210 RLAGDRYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPY 266
D S R YP GYG GY RD R SD + SGG RD Y SR+AP
Sbjct: 238 YTYRDYSHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP- 292
Query: 267 DRPSRGDRPSF 277
P+RG PS+
Sbjct: 293 --PTRGPPPSY 301
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 127/311 (40%), Gaps = 59/311 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ----------------------------------PKMGGEVSD 93
M+G+ + I V +A P GG + D
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDD 128
Query: 94 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSS 149
GY S RG + R PS + G GG
Sbjct: 129 GGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRG 183
Query: 150 RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 209
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 184 RDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDNYSSRDYP-SSRD--TRDYAPPPRD 237
Query: 210 RLAGDRYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPY 266
D S R YP GYG GY RD R SD + SGG RD Y SR+AP
Sbjct: 238 YTYRDYSHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP- 292
Query: 267 DRPSRGDRPSF 277
P+RG PS+
Sbjct: 293 --PTRGPPPSY 301
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE+ L AF ++G I +C ++++R++GRPRGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I VN+A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE+ L AF ++G I +C ++++R++GRPRGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I VN+A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 127/311 (40%), Gaps = 59/311 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ----------------------------------PKMGGEVSD 93
M+G+ + I V +A P GG + D
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDD 128
Query: 94 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSS 149
GY S RG + R PS + G GG
Sbjct: 129 GGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRG 183
Query: 150 RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 209
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 184 RDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRD 237
Query: 210 RLAGDRYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPY 266
D S R YP GYG GY RD R SD + SGG RD Y SR+AP
Sbjct: 238 YTYRDYSHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP- 292
Query: 267 DRPSRGDRPSF 277
P+RG PS+
Sbjct: 293 --PTRGPPPSY 301
>gi|328774055|gb|EGF84092.1| hypothetical protein BATDEDRAFT_84811 [Batrachochytrium
dendrobatidis JAM81]
Length = 158
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E ++F+G L+W+V E+ L NAF G++IEC I +R+SGR RGF F+T+ D A AI
Sbjct: 34 EKKLFIGNLAWSVDEQTLANAFAVHGELIECNIARDRESGRARGFAFVTFQDDDAALKAI 93
Query: 66 REMHGREFGDRVISVNKA 83
++G E DR I V++A
Sbjct: 94 EALNGAEIADRAIRVSEA 111
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL ++TE +L++ F +G ++E QIML+ +GR RGFGFIT+ +++
Sbjct: 199 GPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVE 258
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
I E R+ G + + + KA+PK G SDH SS GR ++G
Sbjct: 259 RVISEGRMRDLGGKQVEIKKAEPKKHG--SDH-------SSNGRSNHG 297
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 115 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 174
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 175 DH--VIDGRTVEVKRTVPR 191
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 9/103 (8%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL ++TE +L++ F +G ++E QIML+ +GR RGFGFIT+ +++ I E
Sbjct: 145 KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 204
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
R+ G + + + KA+PK G SDH SS GR ++G
Sbjct: 205 GRMRDLGGKQVEIKKAEPKKHG--SDH-------SSNGRSNHG 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 115
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 116 DH--VIDGRTVEVKRTVPR 132
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 56/80 (70%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGRPRGFGF+ ++D ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V+ AQ +
Sbjct: 98 AMDGQELQGRNIRVSIAQER 117
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+D+ ++FVGG+SW +E N F +G+I + IM++R +GRPRGFGFIT+AD D
Sbjct: 196 EDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADK 255
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEV 91
+ E H R + V K P+ G EV
Sbjct: 256 VLEEDH--VIDGRAVEVKKTVPREGMEV 281
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ ++TE +L++ F +G I+E QIML+ +GR RGFGF+T+ A++ E
Sbjct: 289 KIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSE 348
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
E G +++ + KA+PK G
Sbjct: 349 GKTHELGGKLVEIKKAEPKRAG 370
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ-------------------------------------PKMGGE 90
M+G+ + I V +A P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGLPPPPRSRGPPRGLRGARGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG R + R PS + G GG
Sbjct: 129 MDDGGYSMNFTMSSSRGPLPVKRGPPPRSGGPPPK-----RSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYNDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 128/314 (40%), Gaps = 63/314 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ------------------------------------PKMGGEV 91
M+G+ + I V +A P GG +
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGSGGTRGPPSRGGHM 128
Query: 92 SDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGSF 147
D GY S RG + R PS + G GG
Sbjct: 129 DDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVS 183
Query: 148 SSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPA 207
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 RGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPP 237
Query: 208 GDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRA 263
D D YG S D YP GY GY RD R SD + SGG RD Y SR+
Sbjct: 238 RDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRS 292
Query: 264 APYDRPSRGDRPSF 277
AP P+RG PS+
Sbjct: 293 AP---PTRGPPPSY 303
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D+ ++F+GG+SW TE +L F FG++ + +M ++ +GRPRGFGF+ YAD A+D
Sbjct: 3 SDQGKLFIGGISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDA 62
Query: 64 AIREMHGREFGDRVISVNKA 83
A+ E H R + V +A
Sbjct: 63 ALLEPH--TLDGRTVDVKRA 80
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+G +IFVGGL ++T+ + F FG + + +M ++ + RPRGFGFIT+ A+
Sbjct: 110 SGTRTKKIFVGGLPSSLTDDEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAV 169
Query: 62 DDAIREMHGREFGDRVISVNKAQPK 86
D + + + G +++ V +A P+
Sbjct: 170 DRVLHKTF-HDLGGKMVEVKRALPR 193
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++F+GG+SW TE +L+ F FG++ + +M ++ +GRPRGFGF+ YAD ++D A
Sbjct: 4 DQGKLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAA 63
Query: 65 IREMHGREFGDRVISVNKA 83
++E H R + V +A
Sbjct: 64 LQEPH--TLDGRTVDVKRA 80
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL ++T+ + F FG + + +M ++ + RPRGFGFIT+ A+D + +
Sbjct: 119 KIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHK 178
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G +++ V +A P+
Sbjct: 179 TF-HDLGGKMVEVKRALPR 196
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 9/103 (8%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL ++TE +L++ F +G ++E QIML+ +GR RGFGFIT+ +++ I E
Sbjct: 127 KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 186
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
R+ G + + + KA+PK G SDH SS GR ++G
Sbjct: 187 GRMRDLGGKQVEIKKAEPKKHG--SDH-------SSNGRSNHG 220
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 38 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 97
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 98 DHV--IDGRTVEVKRTVPR 114
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 126/311 (40%), Gaps = 59/311 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ D R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 68 MHGREFGDRVISVNKAQ----------------------------------PKMGGEVSD 93
M+G+ + I V +A P GG + D
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDD 128
Query: 94 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSS 149
GY S RG + R PS + G GG
Sbjct: 129 GGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRG 183
Query: 150 RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 209
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 184 RDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPPRD 237
Query: 210 RLAGDRYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPY 266
D S R YP GYG GY RD R SD + SGG RD Y SR+AP
Sbjct: 238 YTYRDYSHSSSRDDYPSRGYGDRDGYGRD---REYSD-HPSGGSYRDSYESYGNSRSAP- 292
Query: 267 DRPSRGDRPSF 277
P+RG PS+
Sbjct: 293 --PTRGPPPSY 301
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 9/103 (8%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL ++TE +L++ F +G ++E QIML+ +GR RGFGF+T+ +++ I E
Sbjct: 145 KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 204
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
R+ G + + + KA+PK G SDH SS GR ++G
Sbjct: 205 GRMRDLGGKQVEIKKAEPKKHG--SDH-------SSNGRSNHG 238
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 115
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 116 DH--VIDGRTVEVKRTVPR 132
>gi|428181461|gb|EKX50325.1| RNA recognition motif 1 [Guillardia theta CCMP2712]
Length = 199
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D ++FV GLSW V ++QL AF FG E ++M++R SGR RGFGF+T+++ + A
Sbjct: 86 DPLKLFVSGLSWEVDDQQLMEAFQEFGNC-EAKVMVDRYSGRSRGFGFVTFSEEHSAAKA 144
Query: 65 IREMHGREFGDRVISVNKAQPKM 87
I EM+GRE R I+V A+ K+
Sbjct: 145 IEEMNGRELLGRQITVTHARQKI 167
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++FVGGLSW + L +AF FG++++ +++++R++GRPRGFGF+ ++D A AI
Sbjct: 35 STKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAI 94
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G++ R I VN A
Sbjct: 95 SEMDGKDLNGRNIRVNPAN 113
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL ++TE +L++ F +GK++E QIML+ +GR RGFGF+T+ +++ I E
Sbjct: 145 KIFIGGLPASLTEDELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 204
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY 109
R+ G + + + KA+PK G SD+ G G SS G G Y
Sbjct: 205 GRMRDLGGKQVEIKKAEPKKHG--SDN--IGNGRSSQGGGGY 242
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 115
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 116 EH--VIDGRTVEVKRTVPR 132
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W LE AF +G+I+E +I+ +R++GR RGFGF+T+ + AM AI
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G R I+VN+AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQQ 86
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W LE AF +G+I+E +I+ +R++GR RGFGF+T+ + AM AI
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G R I+VN+AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQQ 86
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W LE AF +G+I+E +I+ +R++GR RGFGF+T+ + AM AI
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G R I+VN+AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQQ 86
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W LE AF +G+I+E +I+ +R++GR RGFGF+T+ + AM AI
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G R I+VN+AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQQ 86
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W LE AF +G+I+E +I+ +R++GR RGFGF+T+ + AM AI
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 66 REMHGREFGDRVISVNKAQP 85
M+G R I+VN+AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQQ 86
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+ ++FVGG+SW TE + F +FG+I + IM +R SGRPRGFGF+T+AD A D +
Sbjct: 78 QGKLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVL 137
Query: 66 REMHGREFGDRVISVNKAQPKMGGEV 91
E H DR + V + P+ EV
Sbjct: 138 EEDH--IIDDRAVEVKRTVPREEMEV 161
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +TE +L F +G I+E QIML+ +GR RGFGF+T+ +++
Sbjct: 169 KIFVGGIPPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFST 228
Query: 68 MHGREFGDRVISVNKAQPK-MGGEVSDHGYRGGGYSSGGRGSYGA 111
E G + + + KA PK GG+ G G+S+G G YGA
Sbjct: 229 GRTHELGGKRVEIKKAVPKRNGGDYGSSGKYHTGFSNGA-GGYGA 272
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 131/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 178 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 237
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 238 MNGKSLDGKAIKVEQATKPSFETGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 297
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG R G P R PS + G GG
Sbjct: 298 MDDGGYSMNFNMSSSRGPLPVKR---GPPPRSVGPPAK--RSAPSGPVRSSSGMGGRAPV 352
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 353 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 406
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 407 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYDSYGNSR 461
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 462 SAP---PTRGPPPSY 473
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ-------------------------------------PKMGGE 90
M+G+ + I V +A P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFRAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMHFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLYPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|2625130|gb|AAB86639.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
Length = 388
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 126/311 (40%), Gaps = 59/311 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ----------------------------------PKMGGEVSD 93
M+G+ + I V +A P GG + D
Sbjct: 69 MNGKSLDGKAIKVEQATKPFFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDD 128
Query: 94 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGSFSS 149
GY S RG + R PS + G GG
Sbjct: 129 GGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRG 183
Query: 150 RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 209
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 184 RDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYTPPPRD 237
Query: 210 RLAGDRYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPY 266
D S R YP GYG GY RD R SD + SGG RD Y SR+AP
Sbjct: 238 YTYRDYCHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRSAP- 292
Query: 267 DRPSRGDRPSF 277
P+RG PS+
Sbjct: 293 --PTRGPPPSY 301
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+ A++
Sbjct: 121 GPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVE 180
Query: 63 DAIREMHGREFGDRVISVNKAQPKM--GGEVSDHG--YRGGGYSSGGRGS 108
+ E + G + + + KA+PK G+ S +G RGGG+ RGS
Sbjct: 181 RVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRHSRGGGHRDSYRGS 230
>gi|384246748|gb|EIE20237.1| hypothetical protein COCSUDRAFT_57959 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKI-IECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGG+SW+ T+++L + F ++ + ++ ++ML+R + R RGFGF+T+ + M++ I
Sbjct: 21 KVFVGGISWHTTDQELADTFSKYAQAPVDARVMLDRITNRSRGFGFVTFDTKEDMEECIA 80
Query: 67 EMHGREFGDRVISVNKAQPK 86
++H E R ISV +A P+
Sbjct: 81 KLHATELDGRKISVTRAIPQ 100
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 4 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXX 63
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AI M+G+E R I+VN+AQ
Sbjct: 64 XXRSAIEGMNGKELDGRNITVNEAQS 89
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSWNV + L++ F+ G+++ + ++R +GR +GFG+++++ A + AI EM
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 69 HGREFGDRVISVNKAQPK 86
+G+E R ++VN A PK
Sbjct: 453 NGKEIDGRAVNVNAATPK 470
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG +S+N E L F G I+ ++ +R++G+ +GFG++ + A +
Sbjct: 492 LFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNAL 551
Query: 69 HGREFGDRVISVNKAQP 85
+G++ R I ++ +QP
Sbjct: 552 NGKDIAGRNIRLDFSQP 568
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 126/306 (41%), Gaps = 54/306 (17%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ D R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 68 MHGREFGDRVISVNKAQ-----------------------------PKMGGEVSDHGYRG 98
M+G+ + I V +A P GG + D GY
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPLRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSM 128
Query: 99 GGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS-AVGGRGGAGGSFSS---RSRFG 154
S RG R + R PS V G GG R +G
Sbjct: 129 NFNMSSSRGPLPVKRGPPPRSGGPPPK-----RSTPSGPVRSSSGMGGRMPVSRGRDSYG 183
Query: 155 GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGD 214
G R + L RD Y+ R DG Y +D Y S+D SRD D PP D D
Sbjct: 184 GP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRD-YLSSRD--TRDYAPPPRDYTYRD 237
Query: 215 RYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPYDRPSR 271
S R YP GYG GY RD R SD + SGG RD Y S +AP P+R
Sbjct: 238 YSHSSSRDDYPSRGYGDRDGYGRD---REYSD-HPSGGSYRDSYESYGNSCSAP---PTR 290
Query: 272 GDRPSF 277
G PS+
Sbjct: 291 GPPPSY 296
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGGL ++TE +L F +GKI+E QIML+ +GR RGFGF+T+
Sbjct: 259 MSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFES 318
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
+++ I E R+ G + + + KA+PK G
Sbjct: 319 EDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 350
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 180 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 239
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 240 EH--VIDGRTVEVKRTVPR 256
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FV GLSW +E L AF RFG + EC+++ + +GR RGFGF+ ++ D A ++
Sbjct: 1 KLFVVGLSWGTSEASLCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKD 60
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGA 111
MH + R I V+ A+ + G S+ Y YS GR Y +
Sbjct: 61 MHFQHLDGRTIRVDYAKYRFGSAASNERYTCRNYSGLGRSHYNS 104
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLS+ E L++AF FG ++E +I+++R+SGR RGFGFIT+ A+
Sbjct: 33 KLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTS 92
Query: 68 MHGREFGDRVISVNKAQPK 86
M G+E R I VN A +
Sbjct: 93 MDGKELQGRNIRVNHANER 111
>gi|302785051|ref|XP_002974297.1| hypothetical protein SELMODRAFT_101375 [Selaginella
moellendorffii]
gi|302807955|ref|XP_002985671.1| hypothetical protein SELMODRAFT_122630 [Selaginella
moellendorffii]
gi|300146580|gb|EFJ13249.1| hypothetical protein SELMODRAFT_122630 [Selaginella
moellendorffii]
gi|300157895|gb|EFJ24519.1| hypothetical protein SELMODRAFT_101375 [Selaginella
moellendorffii]
Length = 187
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++F+GG+SW TE QL + F R+G+I E IM +R++GR RGFGF+++AD A D A
Sbjct: 4 DQGKLFIGGISWETTEEQLRDYFQRYGEIAETMIMKDRNTGRARGFGFVSFADPSAADMA 63
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ E H R++ KA P+
Sbjct: 64 VAEKHT--INGRLVEAKKAVPR 83
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+IFVGGL+ VTE + F++FG I + +M + + RPRGFGFIT+ D +A+
Sbjct: 109 KKIFVGGLASTVTEEEFRGYFEQFGTISDAVVMYDHTTQRPRGFGFITF-DSEDSVEAVL 167
Query: 67 EMHGREFGDRVISVNKAQPK 86
E D+++ V +A P+
Sbjct: 168 MKSFHELKDKMVEVKRAVPR 187
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+G E R FVGGL+W +R LE AF ++G +I+ +I+ +R++GR RGFGF+T+ D +AM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 62 DDAIREMHGREFGDRVIS 79
DAI M+G++ R I+
Sbjct: 63 KDAIEGMNGQDLDGRSIT 80
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 1 MARSDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
M + I M+G+E R I+VN+AQ
Sbjct: 61 RMRNRIEGMNGKELDGRNITVNEAQS 86
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGGL ++TE +L F +GKI+E QIML+ +GR RGFGF+T+
Sbjct: 146 MSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFES 205
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
+++ I E R+ G + + + KA+PK G
Sbjct: 206 EDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 237
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 126
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 127 EH--VIDGRTVEVKRTVPR 143
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+
Sbjct: 179 MSSKDGPKTKKIFVGGIPSSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFES 238
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKM--GGEVSDHG--YRGGGY 101
A++ + E + G + + + KA+PK GG+ S +G RGGG+
Sbjct: 239 EDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGGGDSSSNGRHSRGGGH 286
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 100 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 159
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + PK
Sbjct: 160 AH--VIDGRTVEVKRTVPK 176
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE+ L AF ++G I +C ++++R++GRPRGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I VN+A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IFVGG+ +TE + ++ F +FGK+ E QIM +R +GR RGFGFIT+ + ++
Sbjct: 129 GPKTKKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVE 188
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
+ I + E G + + + KA+PK
Sbjct: 189 EIISQGKMIELGGKQVEIKKAEPK 212
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGLS + T F ++G++ + IM +R +G+PRGFGF+TYAD +D I +
Sbjct: 47 KIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIED 106
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + + + P+
Sbjct: 107 KH--ILDGRTVEIKRTIPR 123
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+SW +E N F +G+I + IM++R +GRPRGFGFIT+AD D + E
Sbjct: 52 KLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE 111
Query: 68 MHGREFGDRVISVNKAQPKMGGEV 91
H + R + V K P+ G EV
Sbjct: 112 DHVID--GRAVEVKKTVPREGMEV 133
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ ++TE +L++ F +G I+E QIML+ +GR RGFGF+T+ A++ E
Sbjct: 141 KIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSE 200
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
E G +++ + KA+PK G
Sbjct: 201 GKTHELGGKLVEIKKAEPKRAG 222
>gi|388495644|gb|AFK35888.1| unknown [Medicago truncatula]
Length = 92
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W R LE AF +FG+I + +++ +R++GR RGFGF+T+A+ ++M DAI
Sbjct: 7 EYRCFVGGLAWATDSRALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAI 66
Query: 66 REMHGREF 73
EM+G++
Sbjct: 67 EEMNGQDI 74
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W + L NAF +G+++E +I+L+R++ R RGFGF+T++
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXX 69
Query: 60 AMDDAIREMHGREFGDRVISVNKAQP 85
AI M+G+E R I+VN+AQ
Sbjct: 70 XXRSAIEGMNGKELDGRNITVNEAQS 95
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 1 MAGKDE-NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
M+G+ E ++FVGGLSW+ T LE+ F +G+I +C+++ +R++GR RGFGF+T+A+
Sbjct: 1 MSGEKEPGKLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDS 60
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
+A + M G E R I V+ A K
Sbjct: 61 DAANAKKCMDGTELDSRQIRVDYASKK 87
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+D ++FVGGLS +VTE FD+FG+I + +M++R +GR RGFGF+TYA+ AM
Sbjct: 145 QDIKKVFVGGLSPDVTEEAFRAYFDKFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKK 204
Query: 64 AIREMHGREFGDRVISVNKAQPKM 87
+ + H E R + V +A+PK+
Sbjct: 205 VLSQQHDME--GRPMDVKRAEPKV 226
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+IFVGG++W+ TE L + F ++G++ + +M ++++G PRGFGF+++A AM+ A+
Sbjct: 45 NKIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVS 104
Query: 67 EMHGREFGDRVISVNKAQPK 86
E H R + V KA P+
Sbjct: 105 EAH--MLDGRNLDVKKAVPR 122
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLS+ E L++AF FG ++E +I+++R+SGR RGFGFIT+ A+
Sbjct: 33 KLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTS 92
Query: 68 MHGREFGDRVISVNKAQPK 86
M G+E R I VN A +
Sbjct: 93 MDGKELQGRNIRVNHANER 111
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+ A++
Sbjct: 46 GPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVE 105
Query: 63 DAIREMHGREFGDRVISVNKAQPKM--GGEVSDHG--YRGGGYSSGGRGS 108
+ E + G + + + KA+PK G+ S +G RGGG+ RGS
Sbjct: 106 RVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRHSRGGGHRDSYRGS 155
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P + GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSLESGRRGPPPPPRRRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG-GGYSSGGRGSYGADRPGGQDDCFKC 123
+ M+G+ R I V++A G+ SD+ RG S+GGRG + D G
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYXAASAGGRGFFRGDESG---SSTGG 115
Query: 124 GRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDR 183
G G+ S GG GG+ + SRS+ GG G DR GG Y R
Sbjct: 116 GDRGYGGSRFESRSGGYGGSRDYYGSRSQGGGYG---------------DRSSGGSY--R 158
Query: 184 DRYDS 188
D YDS
Sbjct: 159 DSYDS 163
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 55/77 (71%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GG+++++ E L AF ++G+++E +++L+R++GR RGFGF+T+ A AI+
Sbjct: 40 SKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASSAIQ 99
Query: 67 EMHGREFGDRVISVNKA 83
+ GR+ RV+ VN A
Sbjct: 100 ALDGRDLHGRVVKVNYA 116
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+ ++IFVGGLSW TE L+ F+ +G++++C IM ++ +G PRGFGF+T+ + D A
Sbjct: 48 NNSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRA 107
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ H E R + KA PK
Sbjct: 108 ATKRH--ELDGRQVEAKKAVPK 127
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
K +IFVGGL + TE F+R G ++E IM + +G RGFGF+T++ M
Sbjct: 136 VTKPTRKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSED-M 194
Query: 62 DDAIREMHGREFGDRVISVNKAQPKMGGE 90
+ + E E +++ V KA+PK E
Sbjct: 195 VEKVFEQSQHEIKGKIVEVKKAEPKHFSE 223
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+ A++
Sbjct: 177 GPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVE 236
Query: 63 DAIREMHGREFGDRVISVNKAQPKM--GGEVSDHG--YRGGGYSSGGRGS 108
+ E + G + + + KA+PK G+ S +G RGGG+ RGS
Sbjct: 237 RVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRHSRGGGHRDSYRGS 286
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 94 KVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 153
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + PK
Sbjct: 154 EH--VIDGRTVEVKRTVPK 170
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL ++TE +L F +GKI+E QIML+ +GR RGFGF+T+ +++ I E
Sbjct: 262 KIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 321
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
R+ G + + + KA+PK G
Sbjct: 322 GRMRDLGGKQVEIKKAEPKKHG 343
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D
Sbjct: 171 GDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVID 230
Query: 63 DAIREMH 69
+ + H
Sbjct: 231 KVLEDEH 237
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGGL +++E L + F +GK++E QIM++ +GR RGFGF+T+
Sbjct: 145 MSSKDGPKTRKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFES 204
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
+++ I E R+ G + + + KA+PK GG +SS GR S+
Sbjct: 205 EDSVERVISEGRMRDLGGKQVEIKKAEPKK---------HGGDHSSNGRSSHA 248
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 66 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 125
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 126 EHN--IDGRTVEVKRTVPR 142
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W E L +AF FG + E +I+L+RD+GR RGFGF+ + + A++
Sbjct: 45 SKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQ 104
Query: 67 EMHGREFGDRVISVNKAQPK 86
EM GRE R I V+ A K
Sbjct: 105 EMDGRELAGRQIRVDYATDK 124
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+S+N E+ L +AF ++G++++ +I+++R+SGR +GFGF+TY AI+
Sbjct: 45 KLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQA 104
Query: 68 MHGREFGDRVISVNKAQ 84
+ G++ R + VN A
Sbjct: 105 LDGQDLYGRRVGVNFAN 121
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++FVGGLSW ++ L +AF FG++++ +++++R++GR RGFGF+ ++D A AI
Sbjct: 35 STKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAI 94
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G++ R I VN+A
Sbjct: 95 SEMDGKDLNGRNIRVNQAN 113
>gi|406507553|gb|AFS34620.1| lark, partial [Clunio marinus]
Length = 285
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 42/206 (20%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+ +IFVG L+ ++ F+++G ++EC ++ R+ G F + AD ++DA
Sbjct: 84 NTTKIFVGNLTEKTRTAEVRELFEKYGTVLECDVVXCRNYG----FVHLEVADNVNVNDA 139
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD--DCFK 122
IRE++G + + V +VS R RPG D C++
Sbjct: 140 IRELNGMVIDGQALKV---------QVSTSRVR--------------QRPGMGDPESCYR 176
Query: 123 CGRPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGD 182
CGR GHW+++CP R G G+F R F +L RDR ID D Y
Sbjct: 177 CGRTGHWSKECPRIWNERAGV-GAFRERGPFIPPPPPPAFL---RDRIIDGFRDFDYYDR 232
Query: 183 RDRYDSKDSKYGSRDRYVSDRYPPAG 208
RD Y +RD + RYPP G
Sbjct: 233 RDEY--------ARDMF-ERRYPPMG 249
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M G ++F+G L N + F+++GK++E I+ + +GF+ + +
Sbjct: 1 MPGAQSFKLFIGNLDENTKTNDVRPLFEKYGKVVEFDIV--------KNYGFVHFQNESD 52
Query: 61 MDDAIREMHGREFGDRVISVNKAQ 84
DA+ ++G I V A+
Sbjct: 53 AXDAVANLNGYVINGNAIKVENAK 76
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGGL +++E L + F +GK++E QIM++ +GR RGFGF+T+
Sbjct: 125 MSSKDGPKTRKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFES 184
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
+++ I E R+ G + + + KA+PK GG +SS GR S+
Sbjct: 185 EDSVERVISEGRMRDLGGKQVEIKKAEPKK---------HGGDHSSNGRSSHA 228
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 105
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 106 EHN--IDGRTVEVKRTVPR 122
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF FIT+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGG+ W+ TE +L+ F+++G + + IM ++ +GRPRGFGF+ +AD +D
Sbjct: 4 DEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAV 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
++E H R + +A + S G G SS G G
Sbjct: 64 LQEKH--TIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMG 104
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE F+ +G + + +M ++++ RPRGFGFI++ A+D + +
Sbjct: 111 KIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHK 170
Query: 68 MHGREFGDRVISVNKAQPK 86
+ +++ V +A PK
Sbjct: 171 TF-HDLNGKLVEVKRALPK 188
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-NSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSWNV + LE+ F GK+++ +++ +RDSGR +GFGF+TY+ ++DA+
Sbjct: 202 NRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAEEVEDAVD 261
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G E R I V+ A+ K
Sbjct: 262 SLNGAELDGRAIRVSVAEAK 281
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +NV QL + F G + ++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 92 QLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQ 151
Query: 68 MHGREFGDRVISVNKAQP 85
+G E R + VN P
Sbjct: 152 FNGYELDGRPLRVNSGPP 169
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSHRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
KD ++F+GGL+W TE L + F+++GK++E +IM + ++GR RGFGF+T+ D ++D+
Sbjct: 153 KDSCKMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDE 212
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
++ H +VI +A P+
Sbjct: 213 VVKTQHI--LDGKVIDPKRAIPR 233
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E+ F ++G II+ Q+ML++D+GR RGFGF+TY A+D +
Sbjct: 241 KIFVGGIGADVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQN 300
Query: 68 MHGREFGDRVISVNKAQPKMG 88
EF + I + +A+P+
Sbjct: 301 KF-IEFKGKQIEIKRAEPRTN 320
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG Y + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAYGAHGRG 100
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++F+GGL W V + +L AF FG++ E +++ +R++GR RGFGF+ Y+D A +AI
Sbjct: 36 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 95
Query: 66 REMHGREFGDRVISVNKAQ---------PKMGGEVSDHGYRGGGYSSGGRGSYGADRPGG 116
M G+E R + VN A P S G+ G S PG
Sbjct: 96 SAMDGKEIDGRQVRVNMANERPLRSTSPPTRAAAASSIGWCTGASSEVFWNWTWCWGPGS 155
Query: 117 QDDCFKCGRP 126
C RP
Sbjct: 156 SSTCTPWTRP 165
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI-R 66
+IFVGGL+ VTE +N FD+FG II+ +M + ++ RPRGFGFIT+ A+D + R
Sbjct: 108 KIFVGGLASTVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMR 167
Query: 67 EMHGREFGDRVISVNKAQPK 86
H E +++ V +A PK
Sbjct: 168 TFH--ELNGKMVEVKRAVPK 185
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D ++F+GG+SW+ E +L+ F FG+++E IM +R +GR RGFGF+ +AD +
Sbjct: 3 SDSGKLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAER 62
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
I+E H + R++ KA P+
Sbjct: 63 VIKEKHSID--GRMVEAKKAVPR 83
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+R+FVGGLSW ++ L+ AF FG +++ +++++RDSGR RGFGF+ ++D +A+
Sbjct: 39 SRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMN 98
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G++ R I VN AQ +
Sbjct: 99 AMDGQQLHGRNIRVNLAQER 118
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG R + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPK-----RSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 56/80 (70%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGR RGFGF+ ++D + ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V+ AQ +
Sbjct: 98 AMDGQELQGRNIRVSIAQER 117
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 56/80 (70%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGR RGFGF+ ++D + ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V+ AQ +
Sbjct: 98 AMDGQELQGRNIRVSIAQER 117
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFEGGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSHGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG R + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPK-----RSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLS+ TE+ L AF RFG+++E +++++R S R +GFGF+ YA + A
Sbjct: 32 TKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAKA 91
Query: 67 EMHGREFGDRVISVNKAQPK 86
EM+G+ R+I V+ +PK
Sbjct: 92 EMNGKVLSGRIIFVDTVKPK 111
>gi|66809079|ref|XP_638262.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466725|gb|EAL64776.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1035
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 53/78 (67%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+ +RI++G ++WNVTE Q+ + F +FG++I C +M D+G+ +GFGF+ + +++ DDA
Sbjct: 767 EASRIYIGSINWNVTEDQVRSIFSQFGRVISCFLMQNADTGKHKGFGFVDFELKKSADDA 826
Query: 65 IREMHGREFGDRVISVNK 82
I M+G E R I V +
Sbjct: 827 IATMNGFELLGRSIKVGR 844
Score = 44.3 bits (103), Expect = 0.054, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERD-SGRPRGFGFITYADRRAMD 62
+D++RI+VG L +++TE + F FG I + L +D SG+ +G+ FI Y ++ +
Sbjct: 585 QDQSRIYVGSLHFSLTEDVIRATFSVFGNIK--SLALGKDASGKSKGYAFIEYDNQESAA 642
Query: 63 DAIREMHGREFGDRVISVNKAQPKMG 88
A++ M R I V A+P G
Sbjct: 643 KALQSMTNYVMCGRAIKV--ARPFTG 666
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGR RGFGF+ ++D + ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V AQ +
Sbjct: 98 AMDGQELQGRNIRVTIAQER 117
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +A FG +++ +++++RDSGR RGFGF+ ++D + ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I VN AQ +
Sbjct: 98 AMDGQELQGRNIRVNIAQER 117
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL+ T Q F+++G+II+ IM +R +GRPRGFGFITY+D +D
Sbjct: 11 GASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDPTVVD 70
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSD 93
I E H D+ + + + PK E D
Sbjct: 71 TVIAETH--IINDKQVEIKRTIPKGSAESKD 99
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ ++ E + + F ++GK+++C+I+ + S R RGFGFI + + +D+ + E
Sbjct: 104 KIFVGGIPTSMNEDEFKGFFSKYGKVVDCEIIRDHVSKRSRGFGFIVFDNELVVDNVLSE 163
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+ + + + KA+PK + S+ G GY S RG
Sbjct: 164 GNMIDMLGTQVEIKKAEPK---KPSNPASSGHGYGSESRG 200
>gi|392347178|ref|XP_003749751.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 446
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 126/311 (40%), Gaps = 59/311 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ D R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 68 MHGREFGDRVISVNKAQ----------------------------------PKMGGEVSD 93
M+G+ + I V +A P GG + D
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDD 128
Query: 94 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS-AVGGRGGAGGSFSS--- 149
GY S RG R + R PS V G GG
Sbjct: 129 GGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPK-----RSTPSGPVRSSSGMGGRMPVSRG 183
Query: 150 RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 209
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 184 RDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRD-YLSSRD--TRDYAPPPRD 237
Query: 210 RLAGDRYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPY 266
D S R YP GYG GY RD R SD + SGG RD Y S +AP
Sbjct: 238 YTYRDYSHSSSRDDYPSRGYGDRDGYGRD---REYSD-HPSGGSYRDSYESYGNSCSAP- 292
Query: 267 DRPSRGDRPSF 277
P+RG PS+
Sbjct: 293 --PTRGPPPSY 301
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + D
Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
A+R M+G R I V+ A S G RGG + + GRG
Sbjct: 63 AMRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGAHGRG 100
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 56/80 (70%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGR RGFGF+ ++D + ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V+ AQ +
Sbjct: 98 AMDGQELQGRNIRVSIAQER 117
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPTFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 56/80 (70%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGR RGFGF+ ++D + ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V+ AQ +
Sbjct: 98 AMDGQELQGRNIRVSIAQER 117
>gi|402220870|gb|EJU00940.1| hypothetical protein DACRYDRAFT_108285 [Dacryopinax sp. DJM-731
SS1]
Length = 491
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 35/180 (19%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++++GGL + L+N F + G ++ ++ L G+GF+ + + +A ++A+
Sbjct: 68 NKVYIGGLPETTRDEDLQNCFGKLGNVVNIELKL--------GYGFVEFDNVKAAEEAVA 119
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRP 126
+ + F I V ++ HG GGR S ++ PG CFKCG+
Sbjct: 120 KYNEGYFMGSKIKVEQS----------HG--------GGRTSKYSNDPGA---CFKCGQH 158
Query: 127 GHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRY 186
GHWAR+CP+ GG G + + R + R + G +D R D GR+ DR+RY
Sbjct: 159 GHWARECPN--GGTSIPGRKYGAYGRQDSLLTR---MNGTKDYGAPPR-DAGRFDDRERY 212
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 10 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 69
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 70 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 129
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 130 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 184
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 185 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 238
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 239 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 293
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 294 SAP---PTRGPPPSY 305
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 19/136 (13%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL+ VTE +N FD+FG II+ +M + ++ RPRGFGFITY A+D + +
Sbjct: 108 KIFVGGLASTVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTK 167
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRG--GGYSSGGRGSYGADRPGGQDDCFKCGR 125
E +++ V +A PK E+S R GY SYG R + + G
Sbjct: 168 TF-HELNGKMVEVKRAVPK---ELSPGPTRSPLSGY------SYGLSRVNSLLNGYSQGY 217
Query: 126 PGHWARDCPSAVGGRG 141
P P++VGG G
Sbjct: 218 P-------PNSVGGYG 226
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D ++FVGG+SW+ E +L+ F FG ++E IM +R +GR RGFGFI +AD D
Sbjct: 3 SDNGKLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADR 62
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
I+E H + R++ +A P+
Sbjct: 63 VIKEKHNID--GRMVEAKRAIPR 83
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSWNV LE F G++++ +++ +RDSGR RGFGF+TY+ +D+AI
Sbjct: 189 NRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAID 248
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G E R I V+ A+ K
Sbjct: 249 SLNGAELDGRAIRVSVAEAK 268
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +NV +L F+ G + +++ ++ +GR RGFGF+T ++ A ++
Sbjct: 91 KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGG-GYSSGGR 106
+G E R + VN P G RGG + SG R
Sbjct: 151 FNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGNR 190
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSHGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
Length = 388
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 125/311 (40%), Gaps = 59/311 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ D R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 68 MHGREFGDRVISVNKAQ----------------------------------PKMGGEVSD 93
M+G+ + I V +A P GG + D
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDD 128
Query: 94 HGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS-AVGGRGGAGGSFSS--- 149
GY S RG + R PS V G GG
Sbjct: 129 GGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRMPVSRG 183
Query: 150 RSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGD 209
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP D
Sbjct: 184 RDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRD-YLSSRD--TRDYAPPPRD 237
Query: 210 RLAGDRYGGSDR--YPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRAAPY 266
D S R YP GYG GY RD R SD + SGG RD Y S +AP
Sbjct: 238 YTYRDYSHSSSRDDYPSRGYGDRDGYGRD---REYSD-HPSGGSYRDSYESYGNSCSAP- 292
Query: 267 DRPSRGDRPSF 277
P+RG PS+
Sbjct: 293 --PTRGPPPSY 301
>gi|281353659|gb|EFB29243.1| hypothetical protein PANDA_006181 [Ailuropoda melanoleuca]
Length = 148
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG Y + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAYGAHGRG 100
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYSNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGR RGFGF+ ++D ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V+ AQ +
Sbjct: 98 AMDGQELQGRNIRVSIAQER 117
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 56 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 115
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 116 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 175
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG R + R PS + G GG
Sbjct: 176 MDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPK-----RSAPSGPVRSSSGMGGRAPV 230
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 231 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 284
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 285 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 339
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 340 SAP---PTRGPPPSY 351
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
+ KD+ ++F+GGL+W TE ++N F +FG +I+ IM + +GR RGFGF+T+A +
Sbjct: 100 IQSKDQGKMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSS 159
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK 86
+D+ +++ H ++I +A PK
Sbjct: 160 VDEVLKKTH--VLDGKLIDPKRAIPK 183
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++ VTE + F +FG II+ Q+ML++D+GR RG+GF+TY A+D +
Sbjct: 191 KIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVTQN 250
Query: 68 MHGREFGDRVISVNKAQPK 86
+ F + + + +A+P+
Sbjct: 251 KYVL-FHGKNMEIKRAEPR 268
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ D DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGAHGRG 100
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLS+ TE L AF +G++IE +I+ +R S R +GFGF+T+A + ++AI +
Sbjct: 30 KLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIED 89
Query: 68 MHGREFGDRVISVNKAQPKMG--GEV 91
M G+ RVI V+ A+P + GE+
Sbjct: 90 MKGKTLNGRVIFVDYAKPNINTRGEI 115
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 48/66 (72%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
DE ++F+GG++W+ +E +L + F +FG++I+ IM ++ +GRPRGFGF+ ++D +D
Sbjct: 3 SDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQ 62
Query: 64 AIREMH 69
+++ H
Sbjct: 63 VLQDKH 68
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI-R 66
+IFVGGL +TE F+ +G++ + IM ++++ RPRGFGFIT+ + A+D + +
Sbjct: 111 KIFVGGLPSALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYK 170
Query: 67 EMHGREFGDRVISVNKAQPK 86
H E +++ V +A PK
Sbjct: 171 SFH--ELNGKLVEVKRALPK 188
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSHGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|281209343|gb|EFA83511.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1109
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
ENRI+VG + WNV E Q++ F G ++ C +M +SGR +GFGFI Y + ++ +DAI
Sbjct: 872 ENRIYVGSIPWNVNEDQIKVIFSSIGNVVSCSLMPNLESGRHKGFGFIDYDNSKSAEDAI 931
Query: 66 REMHGREFGDRVISVNK 82
++G + G R + V +
Sbjct: 932 ATLNGYDIGGRQLKVGR 948
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++RI++G + +N+TE L + F FG I + + +G+ +G+ FI Y+ A ++AI
Sbjct: 684 QSRIYIGNIHFNLTETDLTSIFSPFGPIKSLSLSKDPATGKSKGYCFIEYSYPEAANNAI 743
Query: 66 REMHGREFGDRVISVNK 82
M+ + R I V +
Sbjct: 744 SHMNHQSLAGRQIKVGR 760
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +++FVGGL+W T+ ++ AF FG++ E +I+ +RD+GR RGFGF+T+A + +
Sbjct: 38 GMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAE 97
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
A++ + GR+ R I VN A +
Sbjct: 98 AALQALDGRDLAGRTIRVNYATKQ 121
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+
Sbjct: 180 MSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFES 239
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPK 86
A++ + E + G + + + KA+PK
Sbjct: 240 EDAVERVMSEGRMHDLGGKQVEIKKAEPK 268
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + PK
Sbjct: 161 EH--VIDGRTVEVKRTVPK 177
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+
Sbjct: 180 MSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFES 239
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPK 86
A++ + E + G + + + KA+PK
Sbjct: 240 EDAVERVMSEGRMHDLGGKQVEIKKAEPK 268
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + PK
Sbjct: 161 EH--VIDGRTVEVKRTVPK 177
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 142
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L AF ++G +++ +M +RD+GR RGFGF+TY+ D AI
Sbjct: 4 KVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIAS 63
Query: 68 MHGREFGDRVISVNKAQPK 86
+H +E R I VN A +
Sbjct: 64 LHDQELDGRRIKVNIANAR 82
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IFVGG+ ++TE + ++ F +FGK++E QIM + +GR RGFGF+T+ A++
Sbjct: 135 GPKTKKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVE 194
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
+ + E G + + + KA+PK
Sbjct: 195 EILSHGKMCELGGKQVEIKKAEPK 218
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGLS + F ++G++ + IM +R +G PRGFGF+TYAD +D I++
Sbjct: 52 KIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIKD 111
Query: 68 MHGREFGD-RVISVNKAQPK 86
H F D +++ + + P+
Sbjct: 112 KH---FIDGKMVEIKRTIPR 128
>gi|330793087|ref|XP_003284617.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
gi|325085416|gb|EGC38823.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
Length = 829
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A + NRI++G ++WNVTE Q+ F +FGKII C +M ++G+ +G+GFI + ++++
Sbjct: 617 AVNEANRIYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFIDFENKKSA 676
Query: 62 DDAIREMHGREFGDRVISV 80
DDA+ M+G E R + V
Sbjct: 677 DDAL-AMNGFELLGRAMKV 694
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDS-GRPRGFGFITYADRRA 60
A +D+ R+++G L +++ E + AF +FG + I+L +D+ G+ +G+ FI Y +
Sbjct: 458 AQQDQCRVYIGNLHFSLAEDAIIQAFSQFGTV--KSILLGKDANGKSKGYAFIEYESPDS 515
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGE 90
AI M RVI VN+ P GG+
Sbjct: 516 ATKAIESMSNYVMAGRVIKVNR--PLAGGQ 543
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D N ++VGGLS+ TE L+ +F +FG+++ +I+ +RDSG RGFGF+T+++ RA A
Sbjct: 3 DTNSVYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATVA 62
Query: 65 IREMHGREFGDRVISVNKA 83
I++M GR+ R I VN+
Sbjct: 63 IQDMDGRQIEGRTIRVNEV 81
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG LSW VT+ QL++ F +G ++ Q++++RD+GR +GFGF+ + AI
Sbjct: 40 KKLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAIT 99
Query: 67 EMHGREFGDRVISVNKAQPK 86
MHG+ R ++VN+A+PK
Sbjct: 100 GMHGQVIEGRPLTVNEARPK 119
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +++FVGGL+W T+ ++ AF FG++ E +I+ +RD+GR RGFGF+T+A + +
Sbjct: 38 GMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAE 97
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
A++ + GR+ R I VN A +
Sbjct: 98 AALQALDGRDLAGRTIRVNYATKQ 121
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA-IR 66
+IFVGGL+ VTE + +N FD+FG I + +M + ++ RPRGFGFITY A++ I+
Sbjct: 107 KIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIK 166
Query: 67 EMHGREFGDRVISVNKAQPK 86
H E +++ V +A PK
Sbjct: 167 TFH--ELNGKMVEVKRAVPK 184
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D ++FVGG+SW+ E +L+ F+ +G ++E IM +R +GR RGFGFI +AD D
Sbjct: 3 TDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADR 62
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
IRE H + R++ +A P+
Sbjct: 63 VIREKHNID--GRMVEAKRAVPR 83
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS++VT+ L F +G + Q+ ++R+SGRPRGFGF+ A + AI E+
Sbjct: 3 IYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISEL 62
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
G + RV+ VNKA+P+ GG +S RGSY
Sbjct: 63 DGARWMGRVLKVNKAKPR---------EEGGSRTSNSRGSYN 95
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLSW + L+ AF FG++ E ++ +R++GR RGFGF++++ + ++AI+
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 67 EMHGREFGDRVISVNKAQPK 86
EM G+E R I VN A +
Sbjct: 95 EMDGKELNGRQIRVNLATER 114
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGGL ++TE +L F +GKI+E QIML+ +GR RGFGF+T+
Sbjct: 146 MSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFES 205
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
+++ I E R+ G + + + KA+PK G
Sbjct: 206 EDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 237
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 126
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 127 EH--VIDGRTVEVKRTVPR 143
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLSW + L+ AF FG++ E ++ +R++GR RGFGF++++ + ++AI+
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 67 EMHGREFGDRVISVNKAQPK 86
EM G+E R I VN A +
Sbjct: 95 EMDGKELNGRQIRVNLATER 114
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+ TE+ L AF + G+++E QI+++R S R +GFGF+T+A A+
Sbjct: 34 SKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKALM 93
Query: 67 EMHGREFGDRVISVNKAQPK 86
E +G++F RVI V+ A+ K
Sbjct: 94 EFNGQQFNGRVIFVDYAKAK 113
>gi|121595278|ref|YP_987174.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|222111562|ref|YP_002553826.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|120607358|gb|ABM43098.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|221731006|gb|ACM33826.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 102
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG L+++V + L F +FG + ++M+ERD+GR +GFGF+ DAI
Sbjct: 3 NRLYVGNLAYSVRDESLHQQFSQFGSVTSAKVMMERDTGRSKGFGFVEMGSDSEAQDAIN 62
Query: 67 EMHGREFGDRVISVN-----KAQPKMGGEVSDHGYRGGGY 101
++GR R ++VN +A+P GG GYRGG Y
Sbjct: 63 GLNGRSVDGRALTVNVARPMEARPSFGGGADRGGYRGGRY 102
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D N++FVG LSW V L+ F +GK+++ +++ +R+SGR RGFGF+TY+D +D A
Sbjct: 105 DPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAA 164
Query: 65 IREMHGREFGDRVISVNKA 83
I + G EF R + VN A
Sbjct: 165 IDSLDGAEFDGRELRVNLA 183
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++++G L W QL FG + +++ +++SGR RGF F+T A + ++ I
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKC 123
+ G + G R + V+ Q K RG GY R A RP +DD K
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQN---RPSFPRGEGYQRSER----APRPAARDDPNKV 109
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++F+GGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFIGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGAHGRG 100
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LS+ V+E Q ++ F FG+++ +I+ +R +G+ +GFGF+ +AD+ A ++AI+E
Sbjct: 2 KLYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKE 61
Query: 68 MHGREFGDRVISVNKAQP 85
++G F R I VN+A+P
Sbjct: 62 LNGSNFEGRSIVVNEAKP 79
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GGYS S D + R PS + G GG
Sbjct: 129 MDD-----GGYSMNFNMSSSRDPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 31 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 90
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 91 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 123
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|189339246|ref|NP_446148.1| putative RNA-binding protein 3 [Rattus norvegicus]
gi|149028410|gb|EDL83795.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149028411|gb|EDL83796.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGAHGRG 100
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 51 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 110
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 111 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 143
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+ +++V GLS+ TE L NAF FG+++E +++++R + RPRGF F+ YA AI
Sbjct: 87 QTKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAI 146
Query: 66 REMHGREFGDRVISVNKAQPK 86
MHG+ RVI V A+P+
Sbjct: 147 EGMHGKFLDGRVIFVEVAKPR 167
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++FVGGLSW + L +AF FG++++ +++++R++GR RGFGF+ ++D A AI
Sbjct: 35 STKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAI 94
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G++ R I VN A
Sbjct: 95 SEMDGKDLNGRNIRVNPAN 113
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG L+W+ TE+ + F ++G + E + +RD+GRPRGF F+ + AMD AI+
Sbjct: 3 TKMYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIK 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G E+ R ++VN+A+P+
Sbjct: 63 GLNGLEWMGRALTVNEARPR 82
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ ++F+GG+S++ E+ L AF ++G++++ +I+++R++GR RGFGFITY
Sbjct: 36 MSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEE 95
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK 86
AI+ + G++ R I VN A +
Sbjct: 96 ASSAIQALDGQDLHGRPIRVNYANER 121
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 55/77 (71%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GG+++++ E L AF ++G++++ +++L+R++GR RGFGF+T+ A AI+
Sbjct: 40 SKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQ 99
Query: 67 EMHGREFGDRVISVNKA 83
+ GR+ RV+ VN A
Sbjct: 100 ALDGRDLHGRVVKVNYA 116
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ T Q F+++G+II+ IM +R +GRPRGFGFITY D +D I E
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
H D+ + + + PK E D
Sbjct: 76 YH--IINDKQVEIKRTIPKGSAESKD 99
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +TE + +N F +FGK+ E +I+ + S R RGFGFI + + + +D+ + E
Sbjct: 104 KIFVGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAE 163
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 164 GNRIDMMGTQVEIKKAEPK 182
>gi|27527723|emb|CAC86462.1| glycin-rich RNA binding protein [Polytomella sp. Pringsheim
198.80]
Length = 177
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R++VG LSWN E L F +FG++ E I L+R+SGR RGFGF+T A DAI +
Sbjct: 4 RLYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGRSRGFGFVTLPADVA-KDAIEK 62
Query: 68 MHGREFGDRVISVNKAQP 85
+G EF R I VN+A P
Sbjct: 63 TNGAEFMGRNIKVNEASP 80
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGSRGGAFGAHGRG 100
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL+ T Q F+++G+II+ IM +R +GRPRGFGFITY D +D
Sbjct: 11 GASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVD 70
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSD 93
I E H D+ + + + PK E D
Sbjct: 71 TVIAENH--IINDKQVEIKRTIPKGSAESKD 99
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +TE + +N F +FGK+ E +I+ + S R RGFGFI + + + +D+ + E
Sbjct: 104 KIFVGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAE 163
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 164 GNRTDMMGTQVEIKKAEPK 182
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+++FVGGLS+ E L +AF +G+II+ +I+++RD+GR RGFGFITYA AI
Sbjct: 30 SSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAI 89
Query: 66 REMHGREFGDRVISVNKAQPKMGG 89
+ G++ R + V+ A + G
Sbjct: 90 MALDGKDLHGRNLRVSAATERTSG 113
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+ R++V GLS+ TE L NAF+ FG+++E +++++ + RPRGF F+ Y+ + AI
Sbjct: 78 KTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAI 137
Query: 66 REMHGREFGDRVISVNKAQPK 86
MHG+ RVI V A+P+
Sbjct: 138 EGMHGKFLDGRVIFVEVAKPR 158
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLSW E L+ AF + G++IE +++++RD+GR RGFGF+++ A+
Sbjct: 40 SKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALT 99
Query: 67 EMHGREFGDRVISVNKAQPKM 87
+ G++ R I VN A K+
Sbjct: 100 ALDGQDLHGRQIRVNYATEKL 120
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D+ ++F+GG+SW TE +L F +G++ + +M ++ +GRPRGFGF+ +AD A+D
Sbjct: 3 SDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDR 62
Query: 64 AIREMHGREFGDRVISVNKA 83
A+++ H R + V +A
Sbjct: 63 ALQDPH--TLDGRTVDVKRA 80
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE F+ FG + + +M ++++ RPRGFGFIT+ A+D +++
Sbjct: 119 KIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQK 178
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G +++ V +A P+
Sbjct: 179 TF-HDLGGKLVEVKRALPR 196
>gi|13785947|gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGAHGRG 100
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W E L +AF FG + + +I+L+RD+GR RGFGF+ + + + A++
Sbjct: 45 SKLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQ 104
Query: 67 EMHGREFGDRVISVNKAQPK 86
EM GRE R I V+ A K
Sbjct: 105 EMDGRELAGRQIRVDYATDK 124
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLSW+ T+ L F+ G I E I+++R++GR RGFGF+T+ D+ + + A+ E
Sbjct: 4 KLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAVSE 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++G++ R I V+ A+ K
Sbjct: 64 LNGKDLDGRNIVVSVAEDK 82
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL+ VTE + FD+FG I + +M + ++ RPRGFGFITY A+D + +
Sbjct: 107 KIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLK 166
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPG 127
E +++ V +A PK E+S R S G +YG R + G
Sbjct: 167 TF-HELNGKMVEVKRAVPK---ELSPGPIR----SQLGGFNYGLSRVNSFLSAYNQGY-- 216
Query: 128 HWARDCPSAVGGRGG-AGGSFSSRSRFGGVGVRGDYLGGGRDR---YIDDR--------Y 175
PS VGG G G FS +GG + L GR YI + Y
Sbjct: 217 -----APSTVGGYGVRMDGRFSLSQSYGGSANFNNNLNYGRGLNPYYIGNTNRFNSTIGY 271
Query: 176 DGGRYGDRDRYDS 188
DGG G+ + S
Sbjct: 272 DGGNGGNSSFFSS 284
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D ++F+GG+SW+ E +L++ F +G+++E IM +R +GR RGFGF+ +AD +
Sbjct: 4 DLGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERV 63
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I+E H + R++ KA PK
Sbjct: 64 IKEKHNID--GRMVEAKKAVPK 83
>gi|154296333|ref|XP_001548598.1| hypothetical protein BC1G_12993 [Botryotinia fuckeliana B05.10]
Length = 627
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 10/107 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD---D 63
++IFVGG+S + +E+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ +
Sbjct: 237 SKIFVGGVSQDASEQDFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLE 296
Query: 64 AIREMHGREFGDRVISVNKAQPK--MGGEVSDHGYRGGGYSSGGRGS 108
A E+HG+ I V KAQP+ + E G RG + GG S
Sbjct: 297 APLEIHGKP-----IEVKKAQPRGNIREEEETRGPRGSRFKKGGNAS 338
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
G +++F+GGL+W T+ L++ F +FG+++EC +M + SGR RGFGF+T+ D R +
Sbjct: 114 VGTSSDKMFIGGLNWETTDESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTV 173
Query: 62 DDAIREMH 69
+ + + H
Sbjct: 174 NIVMVKEH 181
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+I+VG LSWN T+ L AF FG +++ +M +RD+GR RGFGF+TY+ + + AI
Sbjct: 5 KIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISG 64
Query: 68 MHGREFGDRVISVNKAQPK 86
++ ++ R I VN A P+
Sbjct: 65 LNDQDLDGRRIKVNIANPR 83
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP +RG PS+
Sbjct: 293 SAPL---TRGPPPSY 304
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+ + L + F ++G++IE +I+L+R+SGR RGFGFITY AI
Sbjct: 34 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAIT 93
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+ R I VN A +
Sbjct: 94 AMDGKTLDGRNIRVNHANER 113
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGLSW+ TE +L + F ++G I+E +M +R +GRPRGFGF+T+ + A D + +
Sbjct: 10 KLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVED 69
Query: 68 MH---GREFGDRVISVNKAQPK 86
+H GR+ + + +PK
Sbjct: 70 VHVIDGRQIDAKKSVPQEMKPK 91
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLS + TE Q F +FG+++E QIM + SGR RGFGF+T+A+ + +
Sbjct: 94 KVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFAA 153
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G + + V A PK
Sbjct: 154 GTMHDLGGKKVEVKPATPK 172
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ +++++RDSGR RGFGF+ ++D ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQ---PKMGG 89
M G+E R I V AQ P+ GG
Sbjct: 98 AMDGQELQGRNIRVRIAQERAPRSGG 123
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G+I+E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKPIKVEQAT 85
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ + T + F+R+G+I + IM +R +GRPRGFGFITYAD +D I+E
Sbjct: 19 KIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE 78
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
H D+ + + + PK + +D
Sbjct: 79 NH--IINDKQVEIKRTIPKGASQTND 102
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 18/97 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ V+E +L+ F + G ++E +I+ + + R RGFGF+ + +A+D+ + +
Sbjct: 107 KIFVGGIPATVSEDELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLAD 166
Query: 68 ------------------MHGREFGDRVISVNKAQPK 86
+ E GD + + KA+PK
Sbjct: 167 GNMIDMDDTQVSLVRLFMVFKIETGDATVEIKKAEPK 203
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G+I+E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKPIKVEQAT 85
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPG 127
M+G+ + I V +A K E G S G R G R G
Sbjct: 69 MNGKSLDGKAIKVEQAT-KPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGG 127
Query: 128 HWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYD 187
H A P + G R +GG R + L RD Y+ R DG Y +D Y
Sbjct: 128 HMA---PVSRG-----------RDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYS 170
Query: 188 SKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSD 244
S+D SRD D PP D YG S D YP GY GY RD R SD
Sbjct: 171 SRDYP-SSRD--TRDYAPPPRGYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD 223
Query: 245 RYASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 277
+ SGG RD Y SR+AP P+RG PS+
Sbjct: 224 -HPSGGSYRDSYESYGNSRSAP---PTRGPPPSY 253
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 33 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 92
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
DA+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 93 DAMMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 127
>gi|449440612|ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 330
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RI+VG L W+V +LE F GK+++ +++ +RDSGR RGFGF+T AD M+DAI
Sbjct: 247 RIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAA 306
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R I VN A+
Sbjct: 307 LDGQSLDGRAIRVNVAE 323
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +++ +L F++ G + +++ R++ R RGFGF+T + + A+
Sbjct: 153 KLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDT 212
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + R+++VNKA P+
Sbjct: 213 FNRYDLSGRLLTVNKAAPR 231
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP +RG PS+
Sbjct: 293 SAPL---TRGPPPSY 304
>gi|319762031|ref|YP_004125968.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330826150|ref|YP_004389453.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317116592|gb|ADU99080.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329311522|gb|AEB85937.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 102
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG L+++V + L F +FG + ++M+ERD+GR +GFGF+ A +AI
Sbjct: 3 NRLYVGNLAYSVRDESLVQQFSQFGAVTSAKVMMERDTGRSKGFGFVEMASGAEAQEAIN 62
Query: 67 EMHGREFGDRVISVN-----KAQPKMGGEVSDHGYRGGGY 101
+HG+ R ++VN +A+P GG GYRG Y
Sbjct: 63 GLHGKSVDGRALTVNVARPMEARPSFGGGADRGGYRGSRY 102
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G+I+E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKPIKVEQAT 85
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+ + L + F ++G++IE +I+L+R+SGR RGFGFITY AI
Sbjct: 31 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAIT 90
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+ R I VN A +
Sbjct: 91 AMDGKTLDGRNIRVNHANER 110
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP +RG PS+
Sbjct: 293 SAPL---TRGPPPSY 304
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus
glaber]
Length = 167
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDSRSRGYRGG 96
>gi|255537972|ref|XP_002510051.1| DAZ-associated protein, putative [Ricinus communis]
gi|223550752|gb|EEF52238.1| DAZ-associated protein, putative [Ricinus communis]
Length = 370
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGLS ++TE Q ++ F+ FGKI++ +M + + RPRGFGF+T+ ++D A+ +
Sbjct: 126 KIFVGGLSSSLTEEQFKDYFESFGKIVDVVVMQDSSTNRPRGFGFVTFDSEDSVDKAMEK 185
Query: 68 MHGREFGDRVISVNKAQPK--MGGEVSDH-----GYRGGGYSSGGRGSYGADRPG 115
G RV V +A PK + G ++ G RG +S G+Y + PG
Sbjct: 186 TFHELMGKRV-EVKRAVPKEEISGTINSSCITKGGIRGSSTNSSRPGNYLSYSPG 239
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ +IFVGG+S + +E L F ++G + + ++ + RGFGF+ ++D +D A
Sbjct: 4 DKAKIFVGGISRDTSEDALRVHFSKYGTVSGSLVAKDKITKNSRGFGFVWFSDSAFVDKA 63
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+++ H R + V KA PK
Sbjct: 64 LQDSH--VILGRTVEVKKAIPK 83
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G+I+E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKPIKVEQAT 85
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ ++F+GG+S++ E+ L AF ++G++++ +I+++R++GR RGFGFITY
Sbjct: 36 MSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEE 95
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK 86
AI+ + G++ R I VN A +
Sbjct: 96 ASSAIQALDGQDLHGRPIRVNYANER 121
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 129/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E ++ +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPSAV----GGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPL 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GYG GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYGDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP +RG PS+
Sbjct: 293 SAPL---TRGPPPSY 304
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 16 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 75
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 76 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 108
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|449501439|ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Cucumis sativus]
Length = 324
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RI+VG L W+V +LE F GK+++ +++ +RDSGR RGFGF+T AD M+DAI
Sbjct: 241 RIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAA 300
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R I VN A+
Sbjct: 301 LDGQSLDGRAIRVNVAE 317
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +++ +L F++ G + +++ R++ R RGFGF+T + + A+
Sbjct: 147 KLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDT 206
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + R+++VNKA P+
Sbjct: 207 FNRYDLSGRLLTVNKAAPR 225
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|50543092|ref|XP_499712.1| YALI0A02981p [Yarrowia lipolytica]
gi|49645577|emb|CAG83635.1| YALI0A02981p [Yarrowia lipolytica CLIB122]
Length = 419
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FV G+S V E +LE+ F FG++++CQIM++ SG RGFGF+ AD D+A+ ++
Sbjct: 183 LFVTGVSRYVNETELEDLFKPFGEVLKCQIMMDPHSGESRGFGFVMMADVTGADEALAKL 242
Query: 69 HGREFGDRVISVNKAQ 84
+G E + +++ KA+
Sbjct: 243 NGHELAGKTLAIEKAK 258
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG LSW L +AF +FG++++ ++ +R++GR RGFGF+T++ + A+
Sbjct: 12 KVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAVDA 71
Query: 68 MHGREFGDRVISVNKAQ--PKMGGEVSDHGYRGG 99
M+G++ R I VN A P GG + G+ GG
Sbjct: 72 MNGQDLNGRNIRVNLANERPAYGGGAQEGGFNGG 105
>gi|156346232|ref|XP_001621481.1| hypothetical protein NEMVEDRAFT_v1g76367 [Nematostella vectensis]
gi|156207460|gb|EDO29381.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
EN+ ++G LS++V E+ LE+ F + +++ I+ +R++GRPRGFGF+T+ + M+ AI
Sbjct: 6 ENKCYIGNLSYSVDEQALEDKFHGYN-VVDVNIITDRETGRPRGFGFVTFGSKEEMEKAI 64
Query: 66 REMHGREFGDRVISVNKAQPK 86
E G++ R + VNKAQP+
Sbjct: 65 DEFDGQDLDGRPMKVNKAQPR 85
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+ E+++FVG LSW VT L +AF R G ++ +++ + ++GR RG+GF+ Y+ + MD
Sbjct: 338 ETEHKLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQ 397
Query: 64 AIREMHGREFGDRVISVNKA 83
AI ++G E R I VN A
Sbjct: 398 AIETLNGTEIEGREIRVNLA 417
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++ G L +N L +++ +R +GR RGF F+T + + I+
Sbjct: 250 TKLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIK 309
Query: 67 EMHGREFGDRVISVNKA-QPKMGGEV---SDHGYRGGGYS 102
+ G + R + VN A +PK + ++H G S
Sbjct: 310 NLDGTLYSGRTMRVNMADRPKPKAPLYPETEHKLFVGNLS 349
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur
garnettii]
Length = 172
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|347828861|emb|CCD44558.1| hypothetical protein [Botryotinia fuckeliana]
Length = 508
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 10/107 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD---D 63
++IFVGG+S + +E+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ +
Sbjct: 117 SKIFVGGVSQDASEQDFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLE 176
Query: 64 AIREMHGREFGDRVISVNKAQPK--MGGEVSDHGYRGGGYSSGGRGS 108
A E+HG+ I V KAQP+ + E G RG + GG S
Sbjct: 177 APLEIHGKP-----IEVKKAQPRGNIREEEETKGPRGSRFKKGGNAS 218
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T+ L++ F +FG+++EC +M + SGR RGFGF+T+ D R ++ + +
Sbjct: 1 MFIGGLNWETTDESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 69 H 69
H
Sbjct: 61 H 61
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+ E+++FVG LSW VT L AF R G ++ +++ + ++GR RG+GF+ Y+ + MD+
Sbjct: 212 ETEHKLFVGNLSWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDE 271
Query: 64 AIREMHGREFGDRVISVNKA 83
AI ++G E R I VN A
Sbjct: 272 AISSLNGTELEGREIRVNLA 291
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++ G L +N QL + +++ +R +GR RGF F+T + + I+
Sbjct: 125 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKN 184
Query: 68 MHGREFGDRVISVNKA---QPKM 87
+ G +G R + VN A +PK+
Sbjct: 185 LDGSLYGGRTMKVNFADRPKPKL 207
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSWNV LE+ F G+++ ++ ++R++G+ RGFGF+T+A A+D A+ E+
Sbjct: 311 IFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKAL-EL 369
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSY 109
+G+E R I+++K+ K +V + + G ++ S
Sbjct: 370 NGKEIDGRPINIDKSVEKDQNQVRERRAKAFGDATSAPSSV 410
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG LS++ TE QL F +G + ++ +R+SGRP+GFG++ + D + A +
Sbjct: 411 LFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGL 470
Query: 69 HGREFGDRVISVNKAQP 85
G+E R + ++ +QP
Sbjct: 471 AGQEIAGRAVRLDFSQP 487
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++F+GGL W V + +L AF FG++ E +++ +R++GR RGFGF+ Y+D A +AI
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 67 EMHGREFGDRVISVNKAQPKMGG 89
M G+E R + VN A + G
Sbjct: 97 AMDGKEIDGRQVRVNMANERPAG 119
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F +FG I E ++ +RD+ R RGFGF+ +A + D+A++
Sbjct: 3 KLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQR 62
Query: 68 MHGREFGDRVISVNKAQ 84
M+ +F R+I V+ AQ
Sbjct: 63 MNNTQFDGRLIRVDHAQ 79
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ M+G+ R I V++A E GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS--SENRSRGYRGG 96
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR- 66
+IFVGG+S T+++ + F +FG++++ +M+++D+GRPRGFGF+T+ + +D I
Sbjct: 205 KIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINV 264
Query: 67 --EMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 265 PLEIHGKP-----IEVKKAQPR 281
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ K++ ++F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + +
Sbjct: 115 SAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV 174
Query: 62 DDAIREMHGREFGD-RVISVNKAQPKMGGEVSDHGYRGG 99
+ + + H F D ++I +A P+ E + + GG
Sbjct: 175 NIVMVKEH---FLDGKIIDPKRAIPRDEQEKTSKIFVGG 210
>gi|219121254|ref|XP_002185854.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582703|gb|ACI65324.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 246
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
D +IFVGGLSW TE L F+++G ++ ++M +R +G PRGF F+ +AD +
Sbjct: 30 VNTDAGKIFVGGLSWQTTEESLRWHFEQYGSVVSVEVMRDRHTGDPRGFAFVVFADHATV 89
Query: 62 DDAIREMHGREFGDRVISVNKAQ------PKMGGEVSDHGYRGGGY----SSGGRGSYGA 111
D + E E +++ V +AQ P + G + HG + +S G
Sbjct: 90 DLVMDE-DSHEINHKIVDVKRAQARGVAPPSIHGRDASHGADPSAHPVPNASERPNPLGG 148
Query: 112 DRPGGQD--------DCFKCGRPGHWARD 132
+ GG+D F G P H RD
Sbjct: 149 NSVGGEDLTPEQMGNKVFVGGIPPHIDRD 177
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD-----RRAM 61
N++FVGG+ ++ L + F+ FG + + +M+++ + R R FGF+T+ D ++A+
Sbjct: 163 NKVFVGGIPPHIDRDGLRDLFEPFGAVTDAIVMMDQTTMRSRCFGFVTFEDGSNGAQKAV 222
Query: 62 DDAIREMHGREFGDRVISVNKAQP 85
D ++ GR ++ + QP
Sbjct: 223 DAQPLQVQGRRVEVKLATPRAEQP 246
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + D
Sbjct: 60 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 119
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
A+R M+G R I V+ A S G RGG + + GRG
Sbjct: 120 AMRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGAHGRG 157
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++++VG LSWN T+ L +AF FG+I++ +M +RD+GR RGFGF+T+ + D AI+
Sbjct: 3 SKVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAIQ 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 63 ALNDQELDGRRIKVNLANAR 82
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++F+GG+SW TE +L F +G++ + +M ++ +GRPRGFGF+ +AD +D A
Sbjct: 4 DQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+++ H R + V +A
Sbjct: 64 LQDPH--TLDGRTVDVKRA 80
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE F FG + + +M ++++ RPRGFGFIT+ A+D +++
Sbjct: 116 KIFVGGLPSTLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQK 175
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G +++ V +A P+
Sbjct: 176 TF-HDLGGKLVEVKRALPR 193
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D +IF+GG+SW +E +L + F ++G++++ IM +R +GR RGFGF+ ++D +D A
Sbjct: 4 DHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVDIA 63
Query: 65 IREMHGREFGDRVISVNKAQPK 86
++E H R + KA P+
Sbjct: 64 LQEKH--TIDGRAVEAKKAVPR 83
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL N+TE +N F +FG I + +M + ++ RPRGFGFI++ A++ +++
Sbjct: 111 KIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQK 170
Query: 68 MHGREFGDRVISVNKAQPK 86
+ ++++ V +A PK
Sbjct: 171 SF-HQLNEKLVEVKRALPK 188
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
DA+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG LSWNV E L N F++FG+I +++ +R+SGR +GFG++ Y A A+ EM
Sbjct: 304 LFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALEEM 363
Query: 69 HGREFGDRVISVNKAQPK 86
G++ R I+V+ + P+
Sbjct: 364 KGKDIDGRTINVDFSAPR 381
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FV LS+ E+ ++ F+ FG I+ +I + +SG+P+GF +I Y + A+ EM
Sbjct: 404 VFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAVEEM 463
Query: 69 HGREFGDRVISVNKAQPK 86
+G R I + + P+
Sbjct: 464 NGALVAGRAIRTDFSTPR 481
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
DA+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 131/314 (41%), Gaps = 62/314 (19%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGLPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS-AVGGRGGAGG-SFS 148
+ D GY S RG + R PS V G GG +
Sbjct: 129 MDDGGYSMNFTLSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 149 SRSRFG-GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPA 207
SR R G G R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDGYGGPPRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPPP 238
Query: 208 GDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRA 263
D D YG S D YP GY GY R+ R SD + SGG RD Y SR+
Sbjct: 239 RDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRE---RDYSD-HPSGGSYRDSYESYGNSRS 293
Query: 264 APYDRPSRGDRPSF 277
AP P+RG PS+
Sbjct: 294 AP---PTRGPPPSY 304
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+S + TE E+ F +FG++I+ +M+++D+GRPRGFGF+T+ A++ + E
Sbjct: 84 KIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAVERCL-E 142
Query: 68 MHGREFGDRVISVNKAQP--KMG 88
H E + I V +AQP KMG
Sbjct: 143 YHPLEILGKPIEVKRAQPRGKMG 165
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L + F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 69 HGREFGD-RVISVNKAQPKMGGEVSDHGYRGG 99
H F D ++I +A P+ E + + GG
Sbjct: 61 H---FLDGKIIDPKRAIPRDEQEKTAKIFVGG 89
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V ++ LE AF +FG + ++M+ERD+GR +GFGF+ +AI
Sbjct: 3 NKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQSLGGRSIVVNEARP 81
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + LE AF +FG + ++M+ERD+GR +GFGF+ A AI+
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSLVVNEARP 81
>gi|284022113|sp|Q925G0.2|RBM3_RAT RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
Length = 155
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + D
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDV 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGAHGRG 100
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + LE AF +FG + ++M+ERD+GR +GFGF+ A AI+
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSLVVNEARP 81
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 73.9 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L WN T+ L NAF +G+I++ +M +RD+GR RGFGF+T+ + + AI
Sbjct: 4 KVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAIIS 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR- 66
+IFVGG+S T+++ + F +FG++++ +M+++D+GRPRGFGF+T+ + +D I
Sbjct: 211 KIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINV 270
Query: 67 --EMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 271 PLEIHGKP-----IEVKKAQPR 287
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ K++ ++F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + +
Sbjct: 116 SAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV 175
Query: 62 DDAIREMHGREFGD-RVISVNKAQPK 86
+ + + H F D +++ + + PK
Sbjct: 176 NIVMVKEH---FLDGKILILLQIDPK 198
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++I+ +M+++D+GRPRGFGF+T+ A++ A+
Sbjct: 194 SKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS 253
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + I V KAQP+
Sbjct: 254 --RPLEILGKTIEVKKAQPR 271
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K++ ++F+GGL+W T++ L+ F +FG++ EC +M + +GR RGFGF+T+ D + ++
Sbjct: 107 KEDGKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNT 166
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 167 VMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 200
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 128/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP Y GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSREYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|168054272|ref|XP_001779556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669037|gb|EDQ55632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++FVG LSW E LE+ F +G+++E +I ++DSGR RGFGF+T ++ ++ AI
Sbjct: 1 NKLFVGNLSWGCDETALESLFSDYGRVVEARIAYDKDSGRSRGFGFVTLSNETEVNTAIE 60
Query: 67 EMHGREFGDRVISVNKA 83
+ G EF R + VN A
Sbjct: 61 NLDGAEFDARQLRVNLA 77
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR- 66
+IFVGG+S T+++ + F +FG++++ +M+++D+GRPRGFGF+T+ + +D I
Sbjct: 204 KIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINV 263
Query: 67 --EMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 264 PLEIHGKP-----IEVKKAQPR 280
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ K++ ++F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + +
Sbjct: 114 SAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV 173
Query: 62 DDAIREMHGREFGD-RVISVNKAQPKMGGEVSDHGYRGG 99
+ + + H F D ++I +A P+ E + + GG
Sbjct: 174 NIVMVKEH---FLDGKIIDPKRAIPRDEQEKTSKIFVGG 209
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ M+G+ R I V++A E GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS--SENRSRGYRGG 96
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ M+G+ R I V++A E GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS--SENRSRGYRGG 96
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D ++F+GG+SW+ E +L++ F FG+++E IM +R +GR RGFGF+ ++D +
Sbjct: 3 SDSGKLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAER 62
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
I+E H + R++ KA P+
Sbjct: 63 VIKEKHSID--GRMVEAKKAVPR 83
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL+ VTE FD+FG I + +M + ++ RPRGFGFITY A+D + +
Sbjct: 108 KIFVGGLASTVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMK 167
Query: 68 MHGREFGDRVISVNKAQPK 86
E +++ V +A PK
Sbjct: 168 TF-HELNGKMVEVKRAVPK 185
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 87
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L W+ TE ++ AF+ FG+++ +++ +R++GRPRGFGF+ D AM +AI +
Sbjct: 5 IYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETGRPRGFGFVEMEDAGAM-EAIDNL 63
Query: 69 HGREFGDRVISVNKAQPK 86
G++FG R + VN+A+P+
Sbjct: 64 DGKDFGGRNLKVNEAKPR 81
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + LE AF +FG + ++M+ERD+GR +GFGF+ A AI+
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSLVVNEARP 81
>gi|168033888|ref|XP_001769446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679366|gb|EDQ65815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++FVG LSW E LE F +G+++E +I ERDSGR RGFGF+T + ++ AI
Sbjct: 24 NKLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAIE 83
Query: 67 EMHGREFGDRVISVNKA 83
+ G ++ R + VN A
Sbjct: 84 SLDGADYDGRELRVNLA 100
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ T+ L F+++G I E ++ +RD+ R RGFGF+ +A D A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGY--RGGGYS 102
M +EF RVI V+KA + ++ GY RG GY+
Sbjct: 62 AMSNQEFDGRVIRVDKASDRSSAPRNEGGYHGRGNGYN 99
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S T+++ ++ F +FG++++ +M+++D+GRPRGFGF+T+ +D ++
Sbjct: 131 SKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGVDACLK 190
Query: 67 ---EMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 191 THLEIHGKP-----IEVKKAQPR 208
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+ ++F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + ++ +
Sbjct: 46 DTKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVM 105
Query: 66 REMHGREFGD-RVISVNKAQPKMGGEVSDHGYRGG 99
+ H F D ++I +A P+ E + + GG
Sbjct: 106 VKEH---FLDGKIIDPKRAIPRDEQEKTSKIFVGG 137
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IF+GG+S+ + L+ AFD++G ++E +I+++RD+GR RGFGF+TY AI+
Sbjct: 40 SKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQ 99
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G++ R + VN A +
Sbjct: 100 AMDGQDLHGRRVRVNYATER 119
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ T+ L F+++G I E ++ +RD+ R RGFGF+ +A D A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGY--RGGGYS 102
M +EF RVI V+KA + ++ GY RG GY+
Sbjct: 62 AMSNQEFDGRVIRVDKASDRSSAPRNEGGYHGRGNGYN 99
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSWNV LE+ F + G+I+ + +R++GR RGFGF+T+A A+D A+ E+
Sbjct: 41 IFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKAL-EL 99
Query: 69 HGREFGDRVISVNKAQPKMGGEV 91
+G+E R I+V+K+ K +V
Sbjct: 100 NGKEIDGRSINVDKSVEKDQNQV 122
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+R+FVG LS++ TE QL F +G I + RDSGRP+GFG++ + D + A
Sbjct: 139 SRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAKKAHE 198
Query: 67 EMHGREFGDRVISVNKAQP 85
+ G+E R I + +QP
Sbjct: 199 SLVGQEIAGRAIRLEFSQP 217
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+S+ + L+ AFD++G ++E +I+++R++GR RGFGF+TY AI+
Sbjct: 41 KLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQA 100
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G++ R + VN A +
Sbjct: 101 LDGQDLHGRRVRVNYATER 119
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGL+W+ T+ L F+++G I E ++ +RD+ R RGFGF+ +A D A+
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ +EF RVI V+KA
Sbjct: 62 AMNNQEFDGRVIRVDKA 78
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRP- 126
M+G+ + I V +A + G RG RG R G + P
Sbjct: 69 MNGKSLDGKAIKVEQAT----KPTFETGRRGQLPPPRSRGPPRGLRGGRGGSSSRGPLPM 124
Query: 127 ----------GHWARDCPS-AVGGRGGAGG-SFSSRSRFGGVGVRGDYLGGGRDRYIDDR 174
R PS V G GG + SR R R + L RD Y+ R
Sbjct: 125 KRGPPPRSGGPPPKRPTPSGPVRSSSGMGGRAPLSRGRDNYGPPRREPLPSRRDVYLSPR 184
Query: 175 YDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKER 231
DG Y +DRYD S+ R D PP D D YG S D YP GY
Sbjct: 185 DDG--YSTKDRYDHYSSRDYPNSRDTRDYAPPPRDYAYRD-YGHSSSRDEYPSRGYSYSS 241
Query: 232 GYERDVGARAGSDR----YASGGPARDDGRGY-RSRAAPYDRPSRGDRPSF 277
+RD G DR + SGG RD Y SR+AP P+RG PS+
Sbjct: 242 YNDRD--GYGGRDRDYSDHPSGGTYRDSYESYGNSRSAP---PARGPPPSY 287
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 131/314 (41%), Gaps = 62/314 (19%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGLPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS-AVGGRGGAGG-SFS 148
+ D GY S RG + R PS V G GG +
Sbjct: 129 MDDGGYSMNFTMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGLGGRAPV 183
Query: 149 SRSRFG-GVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPA 207
SR R G G R + L RD Y+ R DG Y +D Y S++ SRD D PP
Sbjct: 184 SRGRDGYGGPPRREPLPSRRDVYLSPRDDG--YSTKDSYSSREYP-SSRD--TRDYAPPP 238
Query: 208 GDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRA 263
D D YG S D YP GY GY RD R SD + SGG RD Y SR+
Sbjct: 239 RDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRS 293
Query: 264 APYDRPSRGDRPSF 277
AP P+RG PS+
Sbjct: 294 AP---PTRGPPPSY 304
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RIF+GGL + +E+ LE AF FG I + ++ +R++ RGF F+++ + + D+AIR
Sbjct: 9 RIFIGGLDLDCSEQDLEKAFGMFGDISQVMVLRDRETNVSRGFAFMSFESQDSADEAIRR 68
Query: 68 MHGREFGDRVISVNKAQ 84
MHG E R ++V KA+
Sbjct: 69 MHGVEIMGRCVTVRKAE 85
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V ++ LE AF +FG + ++M+ERD+GR +GFGF+ +AI
Sbjct: 3 NKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQSLGGRSIVVNEARP 81
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGL+W+ T+ L F+++G I E ++ +RD+ R RGFGF+ +A D A+
Sbjct: 3 KLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNA 62
Query: 68 MHGREFGDRVISVNKA 83
M+ +EF RVI V+KA
Sbjct: 63 MNNQEFDGRVIRVDKA 78
>gi|299755971|ref|XP_001829009.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
gi|298411464|gb|EAU92644.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 29/129 (22%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++++GGL + + L+N F + GKI+ ++ + G+GF+ + +R A ++++
Sbjct: 85 NKVYIGGLPEHTRQEDLQNCFGKIGKIVNIELKV--------GYGFVEFENREAAEESVE 136
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRP 126
+ H F + I V E+S HG GGR + A PG CF+CG+
Sbjct: 137 KYHEGYFMGQKIRV---------ELS-HG--------GGRTAKYAGEPGA---CFRCGQL 175
Query: 127 GHWARDCPS 135
GHWAR+CP+
Sbjct: 176 GHWARECPT 184
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L +AF +FG++++ +M +R++GR RGFGF+T++ + +I++
Sbjct: 5 KVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQ 64
Query: 68 MHGREFGDRVISVNKAQPK 86
M+ + R I VN A K
Sbjct: 65 MNEQPLDGRNIRVNMANAK 83
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 1 MSSSDEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPED 60
Query: 61 MDDAIREMHGREFGDRVISVNKA 83
DA+ M+G+ R I V++A
Sbjct: 61 AKDAMEAMNGKSVDGRQIRVDQA 83
>gi|46446527|ref|YP_007892.1| nucleic acid-binding protein [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400168|emb|CAF23617.1| probable nucleic acid-binding protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 112
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVG LSW +E QL+ F+ FGK++ +I+ ++ +G+ +GFGF+ ++AIRE
Sbjct: 3 KIFVGNLSWKTSEEQLKAHFEAFGKVVSAKIVTDQMTGKSKGFGFVEMESANDAENAIRE 62
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR 113
++G+ DR + V+ AQ + E + GGG R S+G DR
Sbjct: 63 LNGKPLVDRSLRVSLAQERDRSERREPRSFGGG--DRDRSSFGGDR 106
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine
max]
Length = 476
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 45/66 (68%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D+ ++F+GG+SW+ TE +L+ F +G ++ +M E+++G+PRGFGF+ +AD +D
Sbjct: 3 SDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDR 62
Query: 64 AIREMH 69
+ + H
Sbjct: 63 VLEDKH 68
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE + F+ +G + + +M ++++GRPRGFGFI++ A+D + +
Sbjct: 113 KIFVGGLPPTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHK 172
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + V +A PK
Sbjct: 173 SF-HDLNGKQVEVKRALPK 190
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ M+G+ R I V++A E GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS--SENRSRGYRGG 96
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
DA+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LEN F+ GK++E +++ +RDSGR +GFGF+T + + + AI
Sbjct: 241 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 300
Query: 67 EMHGREFGDRVISVNKAQ 84
++G + R I V++A+
Sbjct: 301 SLNGADLDGRQIRVSEAE 318
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG LS+NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 92 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 151
Query: 68 MHGREFGDRVISVNKAQP 85
+G EF R + VN P
Sbjct: 152 FNGYEFEGRPLRVNAGPP 169
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG LS+N T + LE F + G++ QI+ +RD+GR +GFGF+ D R+ + AI
Sbjct: 3 TKLYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAIS 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G+E R ++VN+A+P+
Sbjct: 63 ALNGQEVDGRALTVNEARPR 82
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+ E+ L + F +G++IE +I+ +R++GR RGFGFITYA AI
Sbjct: 31 SKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAIT 90
Query: 67 EMHGREFGDRVISVNKAQPKM 87
+ G++ R I VN A +
Sbjct: 91 ALDGKDLDGRNIRVNTANERT 111
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++ T+ +L F +G +IECQIML+ ++GR RGFGF+T+ D +++
Sbjct: 130 KIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSV 189
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
E G + + + +A+PK G
Sbjct: 190 GKIHEIGGKQVEIKRAEPKRSG 211
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+SW ++ N F ++G++ + IM + SGRPRGFGF+T+A+ D+ + +
Sbjct: 41 KLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQ 100
Query: 68 MHGREFGDRVISVNKAQPKMGGEVS 92
H + RV+ V + P+ +V+
Sbjct: 101 EHTID--HRVVEVKRTVPREDVDVT 123
>gi|197308346|gb|ACH60524.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308348|gb|ACH60525.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308350|gb|ACH60526.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308352|gb|ACH60527.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308354|gb|ACH60528.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308356|gb|ACH60529.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308358|gb|ACH60530.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308362|gb|ACH60532.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308364|gb|ACH60533.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308366|gb|ACH60534.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308368|gb|ACH60535.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308370|gb|ACH60536.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308372|gb|ACH60537.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308374|gb|ACH60538.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308376|gb|ACH60539.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308378|gb|ACH60540.1| glycine-rich RNA-binding protein [Pseudotsuga macrocarpa]
Length = 71
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
MA D E R FVGGL+W+ +R L+ AF +G+++E +I+ +R++GR RGFGF+T+ D +
Sbjct: 1 MAAADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQ 60
Query: 60 AMDDAIREMHG 70
+M DAI M+G
Sbjct: 61 SMRDAIDAMNG 71
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+ E+++FVG LSW VT L +AF R G ++ +++ + ++GR RG+GF+ Y+ + MD
Sbjct: 222 ETEHKLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQ 281
Query: 64 AIREMHGREFGDRVISVNKA 83
AI ++G E R I VN A
Sbjct: 282 AIETLNGTEIEGREIRVNLA 301
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLS+ E L+ AF ++G +IE +++++RD+GR RGFGFI++ A++
Sbjct: 41 KLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQA 100
Query: 68 MHGREFGDRVISVNKAQPK 86
M G++ R I VN A K
Sbjct: 101 MDGQDLHGRRIRVNYATEK 119
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSW++ + L+N FD G +I ++MLER + R RG+G++ ++D+ + AI+EM
Sbjct: 159 IFVGRLSWSIDDEWLKNEFDHIGGVIGARVMLERGTDRSRGYGYVDFSDKSYAEKAIKEM 218
Query: 69 HGREFGDRVISVNKAQPKMGG 89
HG+E R I+ + + K G
Sbjct: 219 HGKEIDGREINCDMSTSKPAG 239
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+G LS+N + F +FG+I+ ++ ++ +P+GFG++ Y + A+ +
Sbjct: 261 LFLGNLSFNADRDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGNIDDAKKALEAL 320
Query: 69 HGREFGDRVISVNKAQPK 86
G +R + ++ + PK
Sbjct: 321 QGEYIDNRPVRLDYSTPK 338
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 128/315 (40%), Gaps = 64/315 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R G Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDVG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSR 262
D D YG S D YP GY GY RD R SD + SGG RD Y SR
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSR 292
Query: 263 AAPYDRPSRGDRPSF 277
+AP P+RG PS+
Sbjct: 293 SAP---PTRGPPPSY 304
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LEN F+ GK++E +++ +RDSGR +GFGF+T + + + AI
Sbjct: 257 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 316
Query: 67 EMHGREFGDRVISVNKAQ 84
++G + R I V++A+
Sbjct: 317 SLNGADLDGRQIRVSEAE 334
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG LS+NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 68 MHGREFGDRVISVNKAQP 85
+G EF R + VN P
Sbjct: 160 FNGYEFEGRPLRVNAGPP 177
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LEN F+ GK++E +++ +RDSGR +GFGF+T + + + AI
Sbjct: 249 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 308
Query: 67 EMHGREFGDRVISVNKAQ 84
++G + R I V++A+
Sbjct: 309 SLNGADLDGRQIRVSEAE 326
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG LS+NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 68 MHGREFGDRVISVNKAQP 85
+G EF R + VN P
Sbjct: 160 FNGYEFEGRPLRVNAGPP 177
>gi|333977917|ref|YP_004515862.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821398|gb|AEG14061.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
Length = 85
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
++VG L W LE AF R+G+II +++ +R +GR RGFGF+ AD+ A D I +
Sbjct: 5 LYVGNLPWATRAEDLEEAFSRYGEIISARVITDRQTGRSRGFGFVEVADKDA-DAIIAAL 63
Query: 69 HGREFGDRVISVNKAQPK 86
+G EF RVI+VN+A+P+
Sbjct: 64 NGTEFNGRVITVNEARPR 81
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L+++ +E AF +FGK+ + + + R +G RGFGF+T+ADR +DA +
Sbjct: 81 KLFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADRTEAEDAEKG 140
Query: 68 MHGREFGDRVISVNKAQPKMGGEV 91
M+G F R ++VN A+P+ G +
Sbjct: 141 MNGTTFLGREVAVNFARPRPAGSI 164
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus
leucogenys]
Length = 144
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 55/78 (70%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS++VT L++AF ++G + + Q+ +R++GRPRGFGF+ ++ + AI +
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
+G+EF R + VNKA+P+
Sbjct: 63 NGKEFKGRQLKVNKARPR 80
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+ + L + F ++G++IE +I+L+R+SGR RGFGF+TY AI
Sbjct: 30 SKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAIT 89
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+ R I VN A +
Sbjct: 90 AMDGKTLDGRSIRVNHANER 109
>gi|444518692|gb|ELV12325.1| Putative RNA-binding protein 3 [Tupaia chinensis]
Length = 154
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 106
+R M+G R I V+ A S G RGG + + GR
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGARGR 99
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 14 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 73
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
DA+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 74 DAMMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 108
>gi|281210217|gb|EFA84385.1| CCHC-type Zn finger-containing protein [Polysphondylium pallidum
PN500]
Length = 274
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 32/128 (25%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+I+VG L+++ ER++E+ F R+G+I Q+ +GF FI Y+ R A D+AI
Sbjct: 3 KIYVGQLAFDAREREIEDHFGRYGRISHIQMK--------KGFCFIEYSSRDAADEAINS 54
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRP-GGQDDCFKCGRP 126
H F R I V K+ S GA RP G+ CF C +
Sbjct: 55 SHRTNFLGRSIVVEKSH-----------------------SNGAKRPVPGEGRCFHCHQE 91
Query: 127 GHWARDCP 134
GHWA++CP
Sbjct: 92 GHWAKECP 99
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15 [Desmodus rotundus]
Length = 190
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGGL +TE L + F +G ++E QIM++ +GR RGFGF+T+
Sbjct: 142 MSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFES 201
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
+++ I E R+ G + + + KA+PK G
Sbjct: 202 EDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 233
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 123 EHN--IDGRTVEVKRTVPR 139
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGGL +TE L + F +G ++E QIM++ +GR RGFGF+T+
Sbjct: 142 MSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFES 201
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
+++ I E R+ G + + + KA+PK G
Sbjct: 202 EDSVERVISEGRMRDLGGKQVEIKKAEPKKHG 233
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 123 EHN--IDGRTVEVKRTVPR 139
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LEN F+ GK++E +++ +RDSGR +GFGF+T + + + AI
Sbjct: 254 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 313
Query: 67 EMHGREFGDRVISVNKAQ 84
++G + R I V++A+
Sbjct: 314 SLNGADLDGRQIRVSEAE 331
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG LS+NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 68 MHGREFGDRVISVNKAQP 85
+G EF R + VN P
Sbjct: 160 FNGYEFEGRPLRVNAGPP 177
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ + E+ LE F ++G IIE +M +R++ R RGF FIT+ + DA ++
Sbjct: 9 KLFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDATKD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ ++I V +A
Sbjct: 69 MNGKSLDGKLIKVEQAN 85
>gi|297606021|ref|NP_001057893.2| Os06g0566100 [Oryza sativa Japonica Group]
gi|53793272|dbj|BAD54495.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|53793315|dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|215765227|dbj|BAG86924.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677149|dbj|BAF19807.2| Os06g0566100 [Oryza sativa Japonica Group]
Length = 285
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+ +
Sbjct: 49 MSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFEN 108
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
A++ + E + + + + KA+PK G
Sbjct: 109 EDAVERVMSEGRMHDLAGKQVEIKKAEPKKPG 140
>gi|51893978|ref|YP_076669.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
gi|51857667|dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
Length = 86
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L W+ T L F+ +G++ +I+ +R++GR RGFGF+ AD A AI E+
Sbjct: 5 IYVGNLPWSTTPEDLRALFEPYGEVENARIITDRETGRSRGFGFVDMADEEAARRAIAEL 64
Query: 69 HGREFGDRVISVNKAQPKMGG 89
H E+G R ++VN+AQ + GG
Sbjct: 65 HNYEYGGRPLTVNEAQARQGG 85
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine
max]
Length = 471
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 45/65 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++F+GG+SW+ TE +L+ F +G ++ +M E+++G+PRGFGF+ +AD +D
Sbjct: 4 DQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRV 63
Query: 65 IREMH 69
+ + H
Sbjct: 64 LEDKH 68
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE + F+ +G + + +M ++++GRPRGFGFI++ A+D + +
Sbjct: 113 KIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHK 172
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + V +A PK
Sbjct: 173 SF-HDLNGKQVEVKRALPK 190
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + LE AF +FG + ++M+ERD+GR +GFGF+ A AI+
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSLVVNEARP 81
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 57/86 (66%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + +++FVGG+S++ ++ L AF ++G++IE +++++R++GR RGFGF+TY
Sbjct: 37 MSSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEE 96
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK 86
AI+ + G++ R + VN A +
Sbjct: 97 ASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGG+ W+ TE +L+ F+++G + + IM ++ +GRPRGFGF+ +AD +D
Sbjct: 4 DEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAV 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
++E H R + +A + S G G SS G G
Sbjct: 64 LQEKH--TIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMG 104
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE F+ +G + + +M ++++ RPRGFGFI++ A+D R
Sbjct: 111 KIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVD---RV 167
Query: 68 MHGREFGD---RVISVNKAQPK 86
+H + F D +++ V +A PK
Sbjct: 168 LH-KTFHDLNGKLVEVKRALPK 188
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++F+GGL W V + +L AF FG++ E +++ +R++GR RGFGF+ Y+D A +AI
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 67 EMHGREFGDRVISVNKAQPKMGG 89
M G+E R + VN A + G
Sbjct: 97 AMDGKEIDGRQVRVNMANERPAG 119
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++F+GGLSW + L +AF FG +++ +++++R++GR RGFGF+ + D A AI
Sbjct: 16 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 75
Query: 67 EMHGREFGDRVISVNKAQ 84
EM G+E R I VN A
Sbjct: 76 EMDGKELNGRHIRVNPAN 93
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ +E+ LE F +FG+I E +M +R++ + RGF F+TY + DA RE
Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPSDAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKPLDGKPIKVEQAT 85
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 56/82 (68%), Gaps = 8/82 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI-- 65
+IFVGG+S T+++ ++ F +FG++++ +M+++D+GRPRGFGF+T+ ++ +
Sbjct: 268 KIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAR 327
Query: 66 -REMHGREFGDRVISVNKAQPK 86
E+HG ++I V KAQP+
Sbjct: 328 DLEIHG-----KLIEVKKAQPR 344
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W T+ L + F +FG++IEC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 184 KMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVK 243
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 244 EH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 273
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G+I E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKNIKVEQAT 85
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LEN F+ GK++E +++ +RDSGR +GFGF+T + + + AI
Sbjct: 278 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 337
Query: 67 EMHGREFGDRVISVNKAQ 84
++G + R I V++A+
Sbjct: 338 SLNGADLDGRQIRVSEAE 355
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYA 56
++FVG LS+NV QL F+ G + +++ ++ +GR RGFGF+T +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMS 148
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 57/86 (66%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + +++FVGG+S++ ++ L AF ++G++IE +++++R++GR RGFGF+TY
Sbjct: 37 MSSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEE 96
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK 86
AI+ + G++ R + VN A +
Sbjct: 97 ASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ ++ L++AF FG++ E +++ +RD+GR RGFGF++Y + +A+
Sbjct: 36 SKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALS 95
Query: 67 EMHGREFGDRVISV----NKAQPK 86
M G+E G R I V +K QP+
Sbjct: 96 AMDGQELGGRNIRVGYATDKRQPQ 119
>gi|405954502|gb|EKC21922.1| Splicing factor, arginine/serine-rich 6 [Crassostrea gigas]
Length = 231
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + + +F+G LS N R LE+ F+ +G++I C + G +GF+ Y DRR
Sbjct: 1 MSRRGDGSLFIGRLSKNTQPRHLEDVFEPYGRLIRCDVKY----GAEMAYGFVDYEDRRD 56
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
+DA++ +GRE I V A+ + RGGG D+C
Sbjct: 57 AEDALKYENGREICGSSIRVEWAKGNPRRPYAASSNRGGGM---------------YDEC 101
Query: 121 FKCGRPGHWARDCPS 135
++C R GH+ARDCP+
Sbjct: 102 YRCHRTGHFARDCPN 116
>gi|297850158|ref|XP_002892960.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
gi|297338802|gb|EFH69219.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+SW TE N F +FG++++ IM +R +G PRGFGF+T+AD + + E
Sbjct: 60 KLFVGGVSWETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 119
Query: 68 MHGREFGDRVISVNKAQPK 86
H DR + + + P+
Sbjct: 120 EH--VIDDRKVDLKRTVPR 136
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 20/114 (17%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL + E +L+N F +G IIE QIM + +GR RGFGF+T+ ++D
Sbjct: 151 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVD----- 205
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCF 121
R F D + + +A+PK G D+ +R SYGA Q+DC+
Sbjct: 206 ---RLFSDAKVDIKRAEPKRTGR--DNSFR----------SYGASGKYDQEDCY 244
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+S+ + L + F ++G++IE +I+++R+SGR RGFGF+TY AI
Sbjct: 31 KLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 68 MHGREFGDRVISVNKAQPKM 87
+ G+ R I VN A K
Sbjct: 91 LDGKTLDGRSIRVNHANEKT 110
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLSWN + L F+ FG + E ++ +RD+GR RGFGF+ YA+ ++AI
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIAN 62
Query: 68 MHGREFGDRVISVNKAQ 84
M G+EF R + V+KA
Sbjct: 63 MDGQEFDGRRVRVDKAS 79
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLS+ E L+ F ++G++IE +++L+R++GR RGFGFI++ A++
Sbjct: 41 KLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQA 100
Query: 68 MHGREFGDRVISVNKAQPK 86
M G++ R I VN A K
Sbjct: 101 MDGQDLHGRRIKVNYATEK 119
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+D ++F+GGL W+ +E +L+ F +FG++I+ IM E +GR RGFGF+T+A+ R++D+
Sbjct: 125 RDAAKMFIGGLDWDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDE 184
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
++ H +VI +A P+
Sbjct: 185 VVKTEHV--LDGKVIDPKRAIPR 205
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++ V ++ EN F +FG II+ Q+ML++D+GR RGFGF+T+ A+D R
Sbjct: 213 KIFVGGIAPEVRPKEFENFFGKFGTIIDAQLMLDKDTGRSRGFGFVTFDAPDAVD---RV 269
Query: 68 MHGR--EFGDRVISVNKAQPK 86
GR +F R I V +A+P+
Sbjct: 270 CQGRYLDFNGRQIEVKRAEPR 290
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 130/314 (41%), Gaps = 62/314 (19%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADR---PGGQDDCFKCGRPGHWARDCPSAVGGRGGAGGSF 147
V D GY S RG R P K P AR S +GGR
Sbjct: 129 VDDGGYSMNFNMSSSRGPLPVKRGPAPRSGGPPPKRSAPSGPARSS-SGMGGRAPVS--- 184
Query: 148 SSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPA 207
R +GG R + L RD Y+ R DG Y +D S+D SRD D PP
Sbjct: 185 RGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSDSSRDYP-SSRD--TRDYAPPP 238
Query: 208 GDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRA 263
D YG S D YP GY GY RD R SD + SGG RD Y SR+
Sbjct: 239 RGYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRDSYESYGNSRS 293
Query: 264 APYDRPSRGDRPSF 277
AP P+RG PS+
Sbjct: 294 AP---PTRGPPPSY 304
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 56/82 (68%), Gaps = 8/82 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI-- 65
+IFVGG+S T+++ ++ F +FG++++ +M+++D+GRPRGFGF+T+ ++ +
Sbjct: 204 KIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAR 263
Query: 66 -REMHGREFGDRVISVNKAQPK 86
E+HG ++I V KAQP+
Sbjct: 264 DLEIHG-----KLIEVKKAQPR 280
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K++ ++F+GGL+W T+ L + F +FG++IEC +M + +GR RGFGF+T+ D + ++
Sbjct: 116 KEDGKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNI 175
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 176 VMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 209
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++F+GGLSW + L +AF FG +++ +++++R++GR RGFGF+ + D A AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G+E R I VN A
Sbjct: 94 SEMDGKELNGRHIRVNPAN 112
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
AG +IFVGGL+ VTE + F++FG I + +M + S RPRGFGFIT+ A+
Sbjct: 99 AGPRTKKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAV 158
Query: 62 DDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYR-----GGGYSSGGRGSYGADRP 114
D + + + E D+ + V +A PK E+S R G Y + YGA +P
Sbjct: 159 DKVVMK-NFHELHDKTVEVKRALPK---EMSPGSARARSSPAGPYGNPQNSRYGAPQP 212
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
++ ++F+GG+SW TE L+ F +G ++E IM ++ +GR RGFGFI +++ A+D
Sbjct: 3 TEQGKVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDR 62
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
+++ H R + + +A P+
Sbjct: 63 VLQDKH--TIDGRQVELKRAVPR 83
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++++G L ++ E QL + F FG + + + +ER + RPRGFGF+T + R+A +DAI +
Sbjct: 20 KLYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAK 79
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
M + R I VN+++P+ G G R G G YGA P G++D
Sbjct: 80 MDQSQLDGRTIRVNESRPRGEGP----GARRSNEPGTGPGGYGAFNPQGREDV 128
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G+++ +++VG LS++ E + + F+++G + +C + +RD+GRPRGF F+T + A +
Sbjct: 124 GREDVKLYVGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFAFVTMPAKEA-E 182
Query: 63 DAIREMHGREFGDRVISVNKAQPKM 87
A +++G E R + VN+AQPK+
Sbjct: 183 TACNKVNGMELDGRTVRVNEAQPKV 207
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 55/79 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS++ TE+ LE AF ++G I + ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G++ R+I V++A
Sbjct: 63 MAAMNGKQVDGRMIRVDEA 81
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG++++ +++++R++GR RGFGF+ + D A AI
Sbjct: 35 TKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFNDEGAASAAIS 94
Query: 67 EMHGREFGDRVISVNKAQPK 86
EM G++ R I VN A +
Sbjct: 95 EMDGKDLNGRNIRVNVANER 114
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
Length = 104
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 55/79 (69%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L+++V LE F FG++ Q++++R++GR +GFGF+ + D ++ DAI
Sbjct: 4 KLYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAINA 63
Query: 68 MHGREFGDRVISVNKAQPK 86
M+G++ R ++VN+A+P+
Sbjct: 64 MNGKDVNGRALTVNEARPR 82
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G+I E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKNIKVEQAT 85
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ +E+ LE F +FG+I E +M +R++ + RGF F+TY + DA RE
Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKPLDGKPIKVEQAT 85
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGSRGGAFGAHGRG 100
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGG+S+ + L + F ++G++IE +I+++R+SGR RGFGF+TY AI
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAIT 89
Query: 67 EMHGREFGDRVISVNKAQPKM 87
+ G+ R I VN A K
Sbjct: 90 ALDGKTLDGRSIRVNHANEKT 110
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+ E+++FVG LSW VT L AF R G ++ +++ + ++GR RG+GF+ Y+ R MD+
Sbjct: 204 ETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDE 263
Query: 64 AIREMHGREFGDRVISVNKA 83
A+ ++G E R + VN A
Sbjct: 264 ALSSLNGMEMEGREMRVNLA 283
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A +++ G L +N QL + +++ +R +GR RGF F+T +
Sbjct: 111 ASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDC 170
Query: 62 DDAIREMHGREFGDRVISVNKA-QPK 86
+ I+ + G +G R + VN A +PK
Sbjct: 171 ELVIKNLDGSLYGGRTMKVNFADRPK 196
>gi|395854422|ref|XP_003799690.1| PREDICTED: putative RNA-binding protein 3 [Otolemur garnettii]
Length = 155
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSTFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V++A
Sbjct: 64 MRAMNGESLDGRQIRVDRA 82
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++I+ +M+++D+GRPRGFGF+T+ A++ A+
Sbjct: 83 SKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS 142
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + I V KAQP+
Sbjct: 143 --RPLEILGKTIEVKKAQPR 160
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L+ F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 89
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ KD+ ++F+GGL+W T++ L + F +FG+++EC +M + ++GR RGFGF+T+ D + +
Sbjct: 110 SAKDDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTV 169
Query: 62 DDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + + H ++I +A P+ E + + GG
Sbjct: 170 NIVMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 205
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S + T+++ F +FG++I+ +M+++D+GRPRGFGF+T+ +D I
Sbjct: 199 SKIFVGGVSQDTTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDACIN 258
Query: 67 ---EMHGREFGDRVISVNKAQPK 86
E+HG+ I V +AQP+
Sbjct: 259 IPLEIHGKP-----IEVKRAQPR 276
>gi|344270020|ref|XP_003406844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Loxodonta africana]
Length = 477
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 125/313 (39%), Gaps = 62/313 (19%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F GGL E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 95 KLFTGGLHTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESSADAKDAARD 154
Query: 68 MHGREFGDRVISVNKA-------------------------------------QPKMGGE 90
M+G+ + I V +A P GG
Sbjct: 155 MNGKSLDGKAIKVEQAPKPTFESGRRGPPPPPRSTGPPRGLRGGRGGSRGTRGPPSRGGH 214
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS-AVGGRGGAGG-SFS 148
+ GY S RG + + R PS V R G GG +
Sbjct: 215 MDHGGYSMNFNMSSSRGPLPVKKGPPPRSGGPPPK-----RSAPSGPVRSRSGMGGRAPV 269
Query: 149 SRSRFGGVGV-RGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPPA 207
SR R G+ R + L RD Y+ R D R +D Y S+D R D PP
Sbjct: 270 SRGRDSSGGLPRREPLPSPRDVYLSPRDD--RCSTKDSYSSRDYPSSCDTR---DDAPPP 324
Query: 208 GDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY-RSRA 263
D D YG S D YP GY GY RD R SD + SGG R+ Y SR+
Sbjct: 325 RDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRESSESYGNSRS 379
Query: 264 APYDRPSRGDRPS 276
AP P+RG PS
Sbjct: 380 AP---PTRGPPPS 389
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI- 65
++IFVGG+S + T+++ + F +FG++I+ +M+++D+GRPRGFGF+T+ +D+ I
Sbjct: 200 SKIFVGGVSQDTTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDNCIS 259
Query: 66 --REMHGREFGDRVISVNKAQPK 86
E+HG+ I V +AQP+
Sbjct: 260 IPLEIHGKP-----IEVKRAQPR 277
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+ KD+ ++F+GGL+W T++ L + F +FG+++EC +M + ++GR RGFGF+T+ D + +
Sbjct: 111 SAKDDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTV 170
Query: 62 DDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + + H ++I +A P+ E + + GG
Sbjct: 171 NIVMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 206
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++F+GGLSW + L +AF FG +++ +++++R++GR RGFGF+ + D A AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G+E R I VN A
Sbjct: 94 SEMDGKELNGRHIRVNPAN 112
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++F+GGLSW + L +AF FG +++ +++++R++GR RGFGF+ + D A AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G+E R I VN A
Sbjct: 94 SEMDGKELNGRHIRVNPAN 112
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++F+GGLSW + L +AF FG +++ +++++R++GR RGFGF+ + D A AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G+E R I VN A
Sbjct: 94 SEMDGKELNGRHIRVNPAN 112
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+SW TE N F ++G++++ IM +R SGRPRGFGF+T+AD D + E
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEE 60
Query: 68 MHGREFGDRVISVNKAQPKMGGEV 91
H R + V + P+ EV
Sbjct: 61 DHV--IDGRAVEVKRTVPREDMEV 82
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+IFVGG+ ++TE +L+ F +G I++ QIML+ +GR RGFGF+T+ A++
Sbjct: 88 KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFS 147
Query: 67 EMHGREFGDRVISVNKAQ 84
E E G + + + A+
Sbjct: 148 EGRTHELGGKQVGYSSAE 165
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSW VT+ L+ F +G ++ Q++++RD+GR +GFGF+ + AI
Sbjct: 4 KLYVGNLSWGVTDAMLQEMFTPYGAVVSAQVIMDRDTGRSKGFGFVEMGSDQEAQAAISG 63
Query: 68 MHGREFGDRVISVNKAQPK 86
MHG+ R ++VN+A+PK
Sbjct: 64 MHGQVIEGRPLTVNEARPK 82
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+ +
Sbjct: 171 MSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFEN 230
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
A++ + E + + + + KA+PK G
Sbjct: 231 EDAVERVMSEGRMHDLAGKQVEIKKAEPKKPG 262
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D +++
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 151
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 152 EH--TIDGRTVEVKRTVPR 168
>gi|407262829|ref|XP_003945671.1| PREDICTED: putative RNA-binding protein 3-like [Mus musculus]
Length = 154
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW+V LE+ F GK+++ +++ +R+SGR RGFGF+TY+ +++AI
Sbjct: 196 NRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAID 255
Query: 67 EMHGREFGDRVISVNKAQ 84
++G E R I V+ A+
Sbjct: 256 SLNGAELDGRAIRVSVAE 273
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 93 KLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQ 152
Query: 68 MHGREFGDRVISVNKAQP 85
+G E R + VN P
Sbjct: 153 FNGYELEGRALRVNSGPP 170
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+ E+++FVG LSW VT L AF R G ++ +++ + ++GR RG+GF+ Y+ R MD+
Sbjct: 204 ETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDE 263
Query: 64 AIREMHGREFGDRVISVNKA 83
A+ ++G E R + VN A
Sbjct: 264 ALSSLNGMEMEGREMRVNLA 283
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A +++ G L +N QL + +++ +R +GR RGF F+T +
Sbjct: 111 ASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDC 170
Query: 62 DDAIREMHGREFGDRVISVNKA-QPK 86
+ I+ + G +G R + VN A +PK
Sbjct: 171 ELVIKNLDGSLYGGRTMKVNFADRPK 196
>gi|449019177|dbj|BAM82579.1| probable heterogeneous nuclear RNP protein A [Cyanidioschyzon
merolae strain 10D]
Length = 273
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 1 MAGKDENR-IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRR 59
M KD+ R +FVGGLSW+ E L F+RFGK+I+ +M R++G+PRGFGF+T+ +
Sbjct: 1 MERKDKRRKVFVGGLSWDTNEASLVAYFERFGKVIDAVVMRNRETGQPRGFGFVTF-EEE 59
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPK 86
+ A+ + E R++ A PK
Sbjct: 60 GVAQAVASLERHELDGRLVETKVAVPK 86
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
K R++V GL TE L F RFG + +++++ +G +G+GF+ +A+ A
Sbjct: 111 KPSRRVYVSGLPQACTEDDLRAFFSRFGSLEAVRVVVDHHTGLSKGYGFVVFAETAA 167
>gi|427784005|gb|JAA57454.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 181
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 23/130 (17%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+G L + ER +E F+R+G+++ C + G + F+ Y D R +DA++
Sbjct: 6 QLFIGRLPLDTRERDVEQVFERYGRLLRCDVKY----GTGMAYAFVDYEDHRDAEDAVKY 61
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQ--DDCFKCGR 125
+GRE + + V A RG + R S G DR G Q D+C++C R
Sbjct: 62 ENGREIRGQSVVVEWA-------------RGPSF----RPSAGKDRMGYQSFDECYRCRR 104
Query: 126 PGHWARDCPS 135
GHWARDCP
Sbjct: 105 TGHWARDCPE 114
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F +FG I E ++ +RD+ R RGFGF+ +A + A+ E
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYS 102
M+ +EF R I V+KA + G +D G+ YS
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGPRND-GFNRSNYS 96
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R++VG L W V + +LE F GK+I+ +++ +R SGR RGFGF+T A R +DDAI
Sbjct: 123 RVYVGNLPWQVDDSRLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVDDAIAA 182
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G+ R + VN A+ +
Sbjct: 183 LDGQSLEGRALRVNVAEER 201
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG + ++ +E+ L N FD+ G + +++ R++ + RGFGF+T + + A+
Sbjct: 31 KLFVGNIPYDDSEK-LANLFDKAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAERAVEM 89
Query: 68 MHGREFGDRVISVNKAQPK 86
+H + R ++VNKA P+
Sbjct: 90 LHRYDINGRNLTVNKAAPR 108
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI- 65
++IFVGG+S + T+++ ++ F +FG++++ +M+++D+GRPRGFGF+T+ +D +
Sbjct: 200 SKIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLA 259
Query: 66 --REMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 260 QELEIHGKP-----IEVKKAQPR 277
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K++ ++F+GGL+W T++ L F +FG++IEC +M + +GR RGFGF+T+ D + ++
Sbjct: 113 KEDGKMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNI 172
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 173 VMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 206
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G+I E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKNIKVEQAT 85
>gi|156055736|ref|XP_001593792.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980]
gi|154703004|gb|EDO02743.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 521
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S + +E+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ +
Sbjct: 135 SKIFVGGVSQDASEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLE 194
Query: 67 ---EMHGREFGDRVISVNKAQPK--MGGEVSDHGYRGGGYSSGGRG 107
E+HG+ I V KAQP+ + E G RGG + GG
Sbjct: 195 GPLEIHGKP-----IEVKKAQPRGNIREEEEVRGPRGGRFKKGGNA 235
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W T++ L+ F +FG+++EC +M + SGR RGFGF+T+ D R ++ +
Sbjct: 17 HKMFIGGLNWETTDQSLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMV 76
Query: 67 EMH 69
+ H
Sbjct: 77 KEH 79
>gi|389751418|gb|EIM92491.1| hypothetical protein STEHIDRAFT_127304 [Stereum hirsutum FP-91666
SS1]
Length = 454
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 29/134 (21%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K N++++GGL N + L++ F + G+I ++ + G+GF+ + R A ++
Sbjct: 81 KQPNKVYIGGLPENTRQEDLQSCFGKIGRITNIELKV--------GYGFVEFESREAAEE 132
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKC 123
++ + H F MG ++ RGGG + G GA CFKC
Sbjct: 133 SVAKYHEGFF-------------MGNKIRVELSRGGGRYAKFSGDPGA--------CFKC 171
Query: 124 GRPGHWARDCPSAV 137
G+ GHWAR+CP+ V
Sbjct: 172 GQMGHWARECPNHV 185
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
Length = 136
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE F +G++ E +I+ +RD+G RGFGF+T+ DA
Sbjct: 3 EERKLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDA 62
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ M+GR R I V++A+ K
Sbjct: 63 LTSMNGRSLEGRQIRVDRAEKK 84
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 47/65 (72%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++F+GG+SW TE +L++ F ++G +++ +M ++ +GRPRGFGF+ +AD +D
Sbjct: 4 DQGKLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDRV 63
Query: 65 IREMH 69
+++ H
Sbjct: 64 LQDKH 68
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +T+ + F+ +G + + IM ++++ RPRGFGFI++ + A+D + +
Sbjct: 111 KIFVGGLPPALTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHK 170
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + V +A PK
Sbjct: 171 TF-HDLNGKQVEVKRALPK 188
>gi|148695099|gb|EDL27046.1| mCG129611 [Mus musculus]
Length = 172
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+E ++ VGGL++N E+ LEN F FG I E ++ +R++ R GFGFIT+ + D
Sbjct: 22 SEEGKLVVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASD 81
Query: 64 AIREMHGREFGDRVISVNKA-QPKMGGEVSDHGYRGGGYSSGGRGS-YGADRPGGQDDCF 121
A+R M+G R I V+ A + G G RG YS GGR YG+ R Q +
Sbjct: 82 AMRAMNGESLDGRQIRVDHAGKSARGSRGGAFGGRGHSYSRGGRDQGYGSGRYDSQPGEY 141
Query: 122 KCGRPGHWARDCPSAVGG 139
G W+RD + GG
Sbjct: 142 GYGYG--WSRDYSGSQGG 157
>gi|121583148|ref|YP_973589.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596410|gb|ABM39847.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 148
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + L+ +F +FG + ++M+ERD+GR +GFGF+ A+ AI
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGQFGTVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I+VN+A+P
Sbjct: 63 GMNGQPLGGRSITVNEARP 81
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MAGKD---ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
M+ KD +IFVGG+ ++TE +L+ F +GK++E QIML+ +GR RGFGF+T+ +
Sbjct: 108 MSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFEN 167
Query: 58 RRAMDDAIREMHGREFGDRVISVNKAQPKMGG 89
A++ + E + + + + KA+PK G
Sbjct: 168 EDAVERVMSEGRMHDLAGKQVEIKKAEPKKPG 199
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F+++G I + IM ++ + PRGFGF+T++D +D +++
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 88
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 89 EH--TIDGRTVEVKRTVPR 105
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+I+VG L ++VT+ LE+ F FG + ++M++R++GR +GFGF+ A AI
Sbjct: 3 TKIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAIT 62
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 105
+HG R I VN A+P+ + G GGYS G
Sbjct: 63 GLHGMSVDGRSIVVNLARPR------EEGRSSGGYSPQG 95
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix
jacchus]
Length = 172
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LE+ F GK++E +++ +RDSGR +GFGF+TY + + +AI+
Sbjct: 204 NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIK 263
Query: 67 EMHGREFGDRVISVNKAQ 84
+ G + R I V++A+
Sbjct: 264 SLDGADLDGRQIRVSEAE 281
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 68 MHGREFGDRVISVNKAQP 85
+G E R + VN P
Sbjct: 152 FNGYELDGRPLRVNAGPP 169
>gi|363543383|ref|NP_001241701.1| glycine-rich RNA-binding protein [Zea mays]
gi|343227643|gb|AEM17058.1| glycine-rich RNA-binding protein [Zea mays]
Length = 160
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 10 FVGGLSWNVT-ERQLENAFDRFGKIIEC-QIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
FVG L+W + E +LENAF G+I+ Q++ +R++GR RGFGF+T++ +M DAI
Sbjct: 12 FVGELAWATSNESRLENAFASHGEILRTPQVITDRETGRSRGFGFVTFSSENSMLDAIEN 71
Query: 68 MHGREFGDRVISVNKAQPK 86
M+G+E I+VN+AQ +
Sbjct: 72 MNGKELDGHNITVNQAQSR 90
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ M+G+ R I V++A E GYRGG
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS--SENRSRGYRGG 96
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana)
tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana)
tropicalis]
Length = 166
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGL++ TE LE F ++G++ E ++ +R+S R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L + F +FG I E ++ +RD+ R RGFGF+ +++ D A+
Sbjct: 5 KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNA 64
Query: 68 MHGREFGDRVISVNKA 83
M+ +EF RVI V+KA
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|121583453|ref|YP_973884.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596707|gb|ABM40142.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 150
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + L+ +F +FG + ++M+ERD+GR +GFGF+ A+ AI
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I+VN+A+P
Sbjct: 63 GMNGQPLGGRSITVNEARP 81
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R++VG LSW + + +LE F GK++ +++ +R++GR RGFGF+T +D + M+DAI
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAA 266
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R I V+ A+
Sbjct: 267 LDGQILEGRTIKVSVAE 283
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L ++V +L F+ G + +++ R++ + RGFGF+T + + +
Sbjct: 110 KLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGAAK 169
Query: 68 MHGREFGDRVISVNKAQPK 86
+ ++ R ++VNKA P+
Sbjct: 170 FNRYDYNGRPLTVNKAAPR 188
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L AF +FG+I++ +M +RD+GR RGFGF+T++ AI
Sbjct: 4 KVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITS 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 64 LNEQELDGRRIRVNLANAR 82
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VGGLSW+ T+ L ++F+ G + E ++++R +G+ RGFGF+T+AD + AI
Sbjct: 3 TKLYVGGLSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAIS 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
M+G + R I+V++AQ +
Sbjct: 63 AMNGTDLDGRSITVSEAQER 82
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++F+GGLSW + L +AF FG +++ +++++R++GR RGFGF+ + D A AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 66 REMHGREFGDRVISVNKAQ 84
EM G+E R I VN A
Sbjct: 94 SEMDGKELNGRHIRVNPAN 112
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L +AF FG +++ ++++ DSGR RGFGF+ ++D ++AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGRSRGFGFVNFSDDECANEAIK 97
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I V+ AQ +
Sbjct: 98 AMDGQELQGRNIRVSIAQER 117
>gi|440789937|gb|ELR11228.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 506
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A ++ ++F+GGLSW+ T L AF+++GK+ E +++ E +GR RGFG + Y +
Sbjct: 3 ATVNDRKLFIGGLSWSTTSETLRAAFEKYGKVEEAKVISEPGTGRSRGFGAVMYYNESDA 62
Query: 62 DDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCF 121
A + MHG E R + V++ + G E YR GY GS R G D
Sbjct: 63 LAAYKGMHGVELEGRFLYVDRY--RDGQERDRAAYRAAGYDRPYEGS----RRGPTDSAA 116
Query: 122 KCGRPGH 128
GR G+
Sbjct: 117 PYGRDGY 123
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LE+ F GK++E +++ +RDSGR +GFGF+TY + + +AI+
Sbjct: 204 NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIK 263
Query: 67 EMHGREFGDRVISVNKAQ 84
+ G + R I V++A+
Sbjct: 264 SLDGADLDGRQIRVSEAE 281
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A ++
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 68 MHGREFGDRVISVNKAQP 85
+G E R + VN P
Sbjct: 152 FNGYELDGRPLRVNAGPP 169
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ A+
Sbjct: 83 SKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALS 142
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 105
E + I V KAQP+ G + ++ + GG+ +GG
Sbjct: 143 --RPLEILGKPIEVKKAQPR--GNLRENNDQRGGHRAGG 177
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T+ L + F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 89
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 129/324 (39%), Gaps = 76/324 (23%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 10 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 69
Query: 68 MHGREFGDRVISVNKA-QPKM------------------------------------GGE 90
M+G+ + I V +A +P GG
Sbjct: 70 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH 129
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 130 MDDGGYSMNFNMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 184
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDS-----KYGSRD---- 197
R +GG R + L RD Y+ R DG Y +KDS Y SRD
Sbjct: 185 SRGRDSYGGPPRR-EPLPSRRDVYLSPRDDG--------YSTKDSYFYFCSYSSRDYPSS 235
Query: 198 RYVSDRYPPAGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARD 254
R D PP D D YG S D YP GY GY RD R SD + SGG RD
Sbjct: 236 RDTRDYAPPPRDYTYRD-YGHSSSRDDYPSRGYSDRDGYGRD---RDYSD-HPSGGSYRD 290
Query: 255 DGRGY-RSRAAPYDRPSRGDRPSF 277
Y SR+AP P+RG PS+
Sbjct: 291 SYDSYGNSRSAP---PTRGPPPSY 311
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + L+ F G +++ +++ +RDSGR RGFGF+TY+ + ++DAI
Sbjct: 207 NRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAID 266
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G + R I V+ A+ +
Sbjct: 267 SLNGVDLDGRSIRVSAAEER 286
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L ++V L F+R G + +++ ++ +GR RGFGF+T + + ++ A ++
Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDH-GYRGGGYSSGG 105
+G E R I VN E S G RGG S GG
Sbjct: 148 FNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGG 186
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
MAG +IFVGGL+ VTE F++FG I + +M + + R RGFGFITY A
Sbjct: 95 MAGPRTKKIFVGGLAPTVTEDDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDA 154
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK---------MGGEVSDHG--YRGGGYSSGGRGSY 109
+D +++ + ++ + V +A PK G + +G Y GGY G+Y
Sbjct: 155 VDKVLQQTF-HQLKEKTVEVKRAIPKDMSPGNTRGSAGRGASYGAPYMQGGYGPTPVGAY 213
Query: 110 GADRP 114
GA P
Sbjct: 214 GARPP 218
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D +IF+GG+SW+ +E +L++ F +G++++ IM +R +GR RGFGF+ + D D
Sbjct: 3 SDHGKIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADR 62
Query: 64 AIREMH 69
I+E H
Sbjct: 63 VIQEKH 68
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL+ NVTE + F++FG I + +M + ++ RPRGFGFITY A+D A+ +
Sbjct: 107 KIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHK 166
Query: 68 MHGREFGDRVISVNKAQPK 86
+ E +++ V +A PK
Sbjct: 167 -NFHELNGKMVEVKRAVPK 184
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D ++FVGG+SW E +L F RFG++ E IM +R++GR RGFGFI +A+ +
Sbjct: 4 DSGKLFVGGISWETDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEPGVAERV 63
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ H R++ KA P+
Sbjct: 64 TMDKH--MIDGRMVEAKKAVPR 83
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L AF +G+I++ +M +RD+GR RGFGF+T++ D+AI
Sbjct: 4 KVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIAS 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ ++ R I VN A +
Sbjct: 64 LNEQDLDGRRIRVNLANAR 82
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A K ++F+GG+SW TE L + F ++G + + +M ++ SG+PRGFGF+T+AD +
Sbjct: 97 AQKQPGKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVL 156
Query: 62 DDAIREMHGREFGDRVISVNKAQPK 86
D + E H R + V +A P+
Sbjct: 157 DRVLEESHT--IDGRTVEVKRAIPR 179
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+ ++FVGGL +VTE+ F+ FG+I + +M +R++ R RGFGF+T+ + A+ +
Sbjct: 206 ESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEV 265
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I + H E +V+ + +A+PK
Sbjct: 266 ISKTH--ELHGKVVEIKRAEPK 285
>gi|410988519|ref|XP_004000531.1| PREDICTED: putative RNA-binding protein 3 [Felis catus]
Length = 160
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGLS+N E L AF +G II+ +I+++ +S R RGFGFITYA AI
Sbjct: 32 KIFVGGLSYNTDETGLREAFTHYGDIIDAKIIVDHESRRSRGFGFITYAAEDQAKAAIMA 91
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
+ G+E R I V++A + G
Sbjct: 92 LDGKELHGRNIRVSEANERTSG 113
>gi|189210886|ref|XP_001941774.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977867|gb|EDU44493.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 442
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE N F +FG++++ +M+++++GRPRGFGF+T+ A+D +R
Sbjct: 69 SKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLR 128
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + + I V +AQP+
Sbjct: 129 E--PLQILGKQIEVKRAQPR 146
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG LSW V LEN F GK+++ +++ +RDSGR RGFGF+TY +++AI
Sbjct: 14 NKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS 73
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ G + R I V A+ K
Sbjct: 74 NLDGVDLDGRQIRVTVAESK 93
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 1 MSSSDEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPED 60
Query: 61 MDDAIREMHGREFGDRVISVNKA 83
DA+ M+G+ R I V++A
Sbjct: 61 AKDAMEAMNGKSVDGRQIRVDQA 83
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + LE+ F GK++E +++ +RDSGR +GFGF+TY + + +AI
Sbjct: 204 NRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAIN 263
Query: 67 EMHGREFGDRVISVNKAQ 84
++G + R I V++A+
Sbjct: 264 SLNGADLDGRQIRVSEAE 281
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L +NV QL F+ G + +++ ++ +GR RGFGF+T + ++ A +
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQ 151
Query: 68 MHGREFGDRVISVNKAQP 85
+G E R + VN P
Sbjct: 152 FNGYELDGRPLRVNAGPP 169
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R++VG L W V + +LE F GK++E +++ +R++GR RGFGF+T + + +DDAI
Sbjct: 216 RMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAA 275
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R I VN A+
Sbjct: 276 LDGQSLDGRAIRVNVAE 292
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVG L ++V + L FD+ G + +++ R++ + RGFGF+T + + A
Sbjct: 119 EEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKA 178
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ + + R+++VNKA P+
Sbjct: 179 VEMFNRYDINGRLLTVNKAAPR 200
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+ E+++FVG LSW+VT L AF +G I+ +++ + ++GR RG+GF+ YA R M++
Sbjct: 201 ETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMEN 260
Query: 64 AIREMHGREFGDRVISVNKAQ 84
A+ ++G E R + V+ AQ
Sbjct: 261 ALVSLNGVELEGRAMRVSLAQ 281
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++ G L +NV QL +G +++ +RD+GR RGF F+T + + I
Sbjct: 113 TKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIE 172
Query: 67 EMHGREFGDRVISVN---KAQPK 86
+ G +F R++ VN K +PK
Sbjct: 173 NLDGSQFMGRILRVNFSDKPKPK 195
>gi|351706516|gb|EHB09435.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 157
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++FVG L+W L++AF +FG +++ +M +R++GR RGFGFIT+ + A AI
Sbjct: 32 NKLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIE 91
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G+E R I VN A +
Sbjct: 92 ALNGQELDGREIRVNYANSQ 111
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLS+ E+ L + F +G++IE +I+ +R++GR RGFGFITYA AI
Sbjct: 32 KLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITA 91
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G++ R I VN A +
Sbjct: 92 LDGKDLDGRNIRVNTANER 110
>gi|392402152|ref|YP_006438764.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390610106|gb|AFM11258.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 117
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L+++VTE+ L+ AF FG + +++++RD+GRP+GF F+ ++ AI M
Sbjct: 3 IYVGNLAYSVTEQDLKQAFSEFGTVQSAKMIMDRDTGRPKGFAFVEMENKSEGIKAISGM 62
Query: 69 HGREFGDRVISVNKAQPK 86
+GR DR I VN+A+P+
Sbjct: 63 NGRSMNDREIVVNEARPR 80
>gi|345879103|ref|ZP_08830782.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223892|gb|EGV50316.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 93
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E I+VG LSWN T+ +L F +G + +++++R++GR RGFGF+ +D A AI
Sbjct: 2 EMNIYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAI 61
Query: 66 REMHGREFGDRVISVNKAQPK 86
++ + G R + VN+A+P+
Sbjct: 62 DSLNDSQLGGRSLRVNEAKPR 82
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W ER L +AF FG+IIE +++ +R++GR RGFGF++Y + A+
Sbjct: 37 SKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAME 96
Query: 67 EMHGREFGDRVISVNKAQPKMGG 89
M GR R I VN A + G
Sbjct: 97 AMDGRVLDGRTIRVNYATQRQPG 119
>gi|2196542|gb|AAB61213.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 197
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 37/121 (30%)
Query: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIE------------------------ 35
MA D E R FVGGL+W +R LE AF +G+I+E
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKVRWIPSSLCFFLMRFGGGVRQI 60
Query: 36 ------------CQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKA 83
QI+ +R++GR RGFGF+T+++ +AM DAI+ M+G+E R I+VN+A
Sbjct: 61 WLRKSDYGGGYAVQIINDRETGRSRGFGFVTFSNEQAMRDAIQGMNGKELDGRNITVNEA 120
Query: 84 Q 84
Q
Sbjct: 121 Q 121
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLSW T L+ F R+G++I+C +M ++GR RGFGF+T+AD +D A+
Sbjct: 13 KLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRAL-- 70
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDH-GYRGGGY 101
E G + PK S H R GGY
Sbjct: 71 ----ENGPHTLDGRTIDPKPCNPRSQHKPKRTGGY 101
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL N+TE L + F R+G ++E IM +++ + RGFGF+++ + A++ A +
Sbjct: 103 KVFLGGLPPNITETDLRSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAVERATTD 162
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSG 104
H + + V KA+P+ G + S++ Y G
Sbjct: 163 -HFVHISGKQVEVKKAEPRDGNQNSNNSMSTDSYQWG 198
>gi|30692258|ref|NP_849525.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661647|gb|AEE87047.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 105
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E R FVGGL+W + L+ F +FG +I+ +I+ +R+SGR RGFGF+T+ D +AM DAI
Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64
Query: 66 REMH 69
EM+
Sbjct: 65 EEMN 68
>gi|426257071|ref|XP_004022158.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Ovis aries]
gi|426257073|ref|XP_004022159.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Ovis aries]
gi|426257075|ref|XP_004022160.1| PREDICTED: putative RNA-binding protein 3 isoform 3 [Ovis aries]
gi|426257077|ref|XP_004022161.1| PREDICTED: putative RNA-binding protein 3 isoform 4 [Ovis aries]
gi|426257079|ref|XP_004022162.1| PREDICTED: putative RNA-binding protein 3 isoform 5 [Ovis aries]
Length = 160
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N ER LE+ F FG I E ++ +R++ R RGFGFIT+ + +A
Sbjct: 4 EEGKLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y + AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAIS 61
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 108
M+ EF R I V+KA SD G R G GGRGS
Sbjct: 62 AMNNVEFDGRTIRVDKA--------SDTGPRSG---YGGRGS 92
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LSW V + L+ F G +++ +++ +RDSGR RGFGF+TY+ + ++DAI
Sbjct: 208 NRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAID 267
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G + R I V+ A+ +
Sbjct: 268 SLNGIDLDGRSIRVSAAEER 287
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L ++V L F+R G + +++ ++ SGR RGFGF+T + + ++ A ++
Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQ 148
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDH-GYRGGGYSSGG 105
+G E R I VN E S G RGG S GG
Sbjct: 149 FNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGG 187
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y +AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIA 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGL+W T+ L +AF ++G++ +C +M +R++GR RGFGF+T +D A + AI
Sbjct: 21 QKLFVGGLAWATTDDSLFSAFSQYGEVTDCIVMKDRETGRSRGFGFVTMSDPAAAEQAIE 80
Query: 67 EMHGREFGDRVISVNKA 83
++ + R + V+KA
Sbjct: 81 ALNNGDLDGRQVRVDKA 97
>gi|115462709|ref|NP_001054954.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|55733832|gb|AAV59339.1| unknown protein [Oryza sativa Japonica Group]
gi|113578505|dbj|BAF16868.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|215741183|dbj|BAG97678.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 104
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E+R++VG L + ER L+++F +G + +I ++R++GR RGFGF+++ D ++ DAI
Sbjct: 22 ESRVYVGNLPYRADERSLKDSFSNYGAV-SSEIAVDRETGRSRGFGFVSFQDSKSASDAI 80
Query: 66 REMHGREFGDRVISVNKAQPK 86
+ M+G++ G R + V +AQP+
Sbjct: 81 KGMNGQDIGGRNVIVQEAQPR 101
>gi|149744489|ref|XP_001493789.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Equus
caballus]
Length = 156
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|417396333|gb|JAA45200.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15 [Desmodus rotundus]
Length = 158
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRG 98
+ M+G+ R I V++A E GYRG
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS--SENRSRGYRG 95
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++FVGGLSW+V E+ L++AF FG + E +I+ ++DSGR RGFGF+ +++ A A
Sbjct: 36 NKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKD 95
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+ R + +N A K
Sbjct: 96 AMDGKALLGRPLRINFALEK 115
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ TE+ LE F ++G I+E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGGIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKPIKVEQAT 85
>gi|254431254|ref|ZP_05044957.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
gi|197625707|gb|EDY38266.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
Length = 169
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG+++ C + LERD+GR RGF F+ AD A AI +
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVVSCALPLERDTGRKRGFAFVEMADPEAESRAIEAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGSELMGRPLRINKAEPR 80
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ + AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGNDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQPLGGRSIVVNEARP 81
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F +FG I E ++ +RD+ R RGFGF+ +A + A+ E
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYS 102
M+ +EF R I V+KA + G +D G+ YS
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGPRND-GFNRSNYS 96
>gi|425766220|gb|EKV04844.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
PHI26]
gi|425779142|gb|EKV17231.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
Pd1]
Length = 447
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ A+
Sbjct: 81 SKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALS 140
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGG 105
E + I V KAQP+ G + ++ + GG+ +GG
Sbjct: 141 --RPLEILGKPIEVKKAQPR--GNLRENNDQRGGHRNGG 175
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 23 LENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 82
L + F +FG++ EC +M + +GR RGFGF+T+ D + ++ + + H ++I +
Sbjct: 13 LRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEH--YLDGKIIDPKR 70
Query: 83 AQPKMGGEVSDHGYRGG 99
A P+ E + + GG
Sbjct: 71 AIPRDEQEKTSKIFVGG 87
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 25 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 84
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 85 MMAMNGKSVDGRQIRVDQA 103
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 15/121 (12%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY---ADRRAMDD 63
++IFVGG+S T+ + F +FG++++ +M+++D+GRPRGFGF+T+ A A +
Sbjct: 309 SKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLN 368
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKC 123
A E+HG+ I V KAQP+ G D R G + G+G GG DD
Sbjct: 369 AKLELHGKP-----IEVKKAQPR-GNLRDDEDARRGKFGRKGQGI------GGIDDALNT 416
Query: 124 G 124
G
Sbjct: 417 G 417
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W T+ L N F +FG+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 226 KMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMVK 285
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 286 EH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 315
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS++ TE+ LE+AF ++G I + R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RI+VG L W V + +L F GK+++ +++ +RD+GR RGFGF+T A + +DDAI
Sbjct: 211 RIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDAIAA 270
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R + VN A+
Sbjct: 271 LDGQSLEGRALRVNVAE 287
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E +++VG L ++V +L F++ G + +++ R++ + RGFGF+T + + A
Sbjct: 114 EEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKA 173
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ H + R+++VNKA P+
Sbjct: 174 VEMFHRYDVNGRLLTVNKAAPR 195
>gi|436841541|ref|YP_007325919.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13
= DSM 14728]
gi|432170447|emb|CCO23818.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13
= DSM 14728]
Length = 87
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L W+ +E + AF+ +G++I +++ +R++GRPRGFGF+ D A+ DAI +
Sbjct: 5 IYVGNLPWSASEDDVRAAFEAYGEVISVKLIEDRETGRPRGFGFVEMEDNGAL-DAIDNL 63
Query: 69 HGREFGDRVISVNKAQPK 86
G++FG R + VN+A+P+
Sbjct: 64 DGKDFGGRNLKVNEAKPR 81
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D NR++VG LSW V L N F G+++E +I+ +R+SGR RGFGF+TY +++A
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I + G + R I V A+ K
Sbjct: 235 ISNLDGSDLDGRQIRVTVAESK 256
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R+FVG L ++V QL F++ G + +++ ++ +GR RGFGF+T + + ++ A+ +
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEAAVEQ 143
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRG 98
+G R + VN P S G RG
Sbjct: 144 FNGYVLDGRSLRVNSGPPPPRDPSSQRGPRG 174
>gi|443897423|dbj|GAC74764.1| hsp27-ere-tata-binding protein/Scaffold attachment factor
[Pseudozyma antarctica T-34]
Length = 285
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N + V GLS TER LE AF ++G I Q+M + + PRGF F+TY + AI
Sbjct: 74 NNLHVSGLSKTTTERDLEEAFGKYGAIQRAQVMYDPHTREPRGFAFVTYEKAEDAEAAIT 133
Query: 67 EMHGREFGDRVISVNKAQ 84
M+G +F R I+V+KA+
Sbjct: 134 AMNGSDFQGRKITVDKAR 151
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D NR++VG LSW V L N F G+++E +I+ +R+SGR RGFGF+TY +++A
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I + G + R I V A+ K
Sbjct: 235 ISNLDGADLDGRQIRVTVAESK 256
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
++ R+FVG L ++V QL F++ G + +++ ++ +GR RGFGF+T + ++
Sbjct: 78 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEV 137
Query: 64 AIREMHGREFGDRVISVNKAQP 85
A+ + +G R + VN P
Sbjct: 138 AVDQFNGYVLDGRSLRVNSGPP 159
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D NR++VG LSW V L N F G+++E +I+ +R+SGR RGFGF+TY +++A
Sbjct: 177 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 236
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I + G + R I V A+ K
Sbjct: 237 ISNLDGADLDGRQIRVTVAESK 258
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D+ R+FVG L ++V QL F++ G + +++ ++ +GR RGFGF+T + ++
Sbjct: 80 SDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEV 139
Query: 64 AIREMHGREFGDRVISVNK 82
A+ + +G R + VN
Sbjct: 140 AVDQFNGYVLDGRSLRVNS 158
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD----RRAMDD 63
++FVGGLSW T+ L+ F R+G++I+C +M ++GR RGFGF+T+AD RA+++
Sbjct: 20 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 79
Query: 64 AIREMHGREF 73
+ GR
Sbjct: 80 GPHTLDGRTI 89
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL N+TE L + F R+G ++E IM +++ + RGFGF+++ + A++ A E
Sbjct: 110 KVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATAE 169
Query: 68 MHGREFGDRVISVNKAQPK 86
H + + + KA+P+
Sbjct: 170 -HFVNISGKQVEIKKAEPR 187
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N + V GLS T+R LE+AF ++G I Q+M + S PRGF F+T+ + AI
Sbjct: 76 NNLHVSGLSNRTTDRDLEDAFGKYGAIERAQVMYDPHSREPRGFAFVTFVKAEDAEAAIT 135
Query: 67 EMHGREFGDRVISVNKAQ 84
M+G EF R I+V+KA+
Sbjct: 136 AMNGTEFLGRKITVDKAR 153
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M D ++FVGG+SW +E +L F RFG++ E IM +R +GR RGFGF+ +AD
Sbjct: 1 MEAADHGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAV 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDC 120
+ E H R++ KA P+ DH + S G+ PG
Sbjct: 61 AERVTTEKH--MIDGRMVEAKKAVPR-----DDHSI----VTKSNASSIGSPGPGRTRKI 109
Query: 121 FKCGRPGH 128
F G P +
Sbjct: 110 FVGGLPSN 117
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL NVTE F++FG I + +M + ++ RPRGFGFITY A+D A+ +
Sbjct: 108 KIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHK 167
Query: 68 MHGREFGDRVISVNKAQPK 86
E +++ V +A PK
Sbjct: 168 SF-HELNGKMVEVKRAVPK 185
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D NR++VG LSW V L N F G+++E +I+ +R+SGR RGFGF+TY +++A
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I + G + R I V A+ K
Sbjct: 235 ISNLDGADLDGRQIRVTVAESK 256
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
D+ R+FVG L ++V QL F++ G + +++ ++ +GR RGFGF+T + ++
Sbjct: 78 SDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEV 137
Query: 64 AIREMHGREFGDRVISVNK 82
A+ + +G R + VN
Sbjct: 138 AVDQFNGYVLDGRSLRVNS 156
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+D R+F+GGLS V +L AF ++G++ E + ++R SGR RGFGF+++ D
Sbjct: 9 VAEDGTRLFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDA 68
Query: 62 DDAIREMHGREFGDRVISVNKA 83
DAI +M G+E R I V+ A
Sbjct: 69 QDAIDQMTGKELCGRSIRVSHA 90
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE++ + F +FG++I+ +M+++D+GRPRGFGF+T+ A++ A+
Sbjct: 189 SKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS 248
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ I V KAQP+
Sbjct: 249 --RPLAICGKPIEVKKAQPR 266
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K++ ++F+GGL+W T++ L + F +FG++ EC +M + +GR RGFGF+T+ D + ++
Sbjct: 102 KEDGKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNT 161
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 162 VMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 195
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE++ + F +FG++I+ +M+++D+GRPRGFGF+T+ A++ A+
Sbjct: 189 SKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS 248
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ I V KAQP+
Sbjct: 249 --RPLAICGKPIEVKKAQPR 266
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K++ ++F+GGL+W T++ L + F +FG++ EC +M + +GR RGFGF+T+ D + ++
Sbjct: 102 KEDGKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNT 161
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 162 VMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 195
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 56/82 (68%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IF+ GLS+++ + L++ F +G+I ++++++ +GR +G+GF+ AD A AI E+
Sbjct: 3 IFIAGLSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEEL 62
Query: 69 HGREFGDRVISVNKAQPKMGGE 90
+G E+ R ISV++A+P+ G+
Sbjct: 63 NGAEYDGRTISVSEARPRTEGD 84
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSW ++ L++AF FG+++E +++ +RD+G+ RGFGF+++++ +A+
Sbjct: 37 TKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMS 96
Query: 67 EMHGREFGDRVISVNKAQPKMGG 89
M G+E R I VN A + G
Sbjct: 97 SMDGQELEGRNIHVNFANERPAG 119
>gi|156348369|ref|XP_001621824.1| hypothetical protein NEMVEDRAFT_v1g143489 [Nematostella
vectensis]
gi|156208104|gb|EDO29724.1| predicted protein [Nematostella vectensis]
Length = 89
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E R ++G LS++V E+ LE F +++ +++ +R++GRPRGFGF+T+ + M+ A
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHG-CDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I E G++F R + VN+AQP+
Sbjct: 62 IDEFDGQDFDGRPMKVNQAQPR 83
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 116/296 (39%), Gaps = 60/296 (20%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ-------------------------------------PKMGGE 90
M+G+ + I V +A P GG
Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGLPPPPRSRGPPRGLRGARGGSGGTRGPPSRGGH 128
Query: 91 VSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS----AVGGRGGAGGS 146
+ D GY S RG + R PS + G GG
Sbjct: 129 MDDGGYSMNFTMSSSRGPLPV-----KRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPV 183
Query: 147 FSSRSRFGGVGVRGDYLGGGRDRYIDDRYDGGRYGDRDRYDSKDSKYGSRDRYVSDRYPP 206
R +GG R + L RD Y+ R DG Y +D Y S+D SRD D PP
Sbjct: 184 SRGRDSYGGP-PRREPLPSRRDVYLSPRDDG--YSTKDSYSSRDYP-SSRD--TRDYAPP 237
Query: 207 AGDRLAGDRYGGS---DRYPVNGYGKERGYERDVGARAGSDRYASGGPARDDGRGY 259
D D YG S D YP GY GY RD R SD + SGG RD Y
Sbjct: 238 PRDYTYRD-YGHSSSRDDYPSRGYNDRDGYGRD---RDYSD-HPSGGSYRDSYESY 288
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE + ++ F R+G +++ QIM + ++ R RGFGFI +A + +DD +
Sbjct: 116 KIFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLAN 175
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 176 GNMVDLAGSKVEIKKAEPK 194
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL + T+ F ++G+I++ IM +R + +PRGFGFITY+D +D I +
Sbjct: 26 KIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIED 85
Query: 68 MHGREFGDRVISVNKAQPK 86
H + + + + PK
Sbjct: 86 NH--VINGKQVEIKRTIPK 102
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRG 107
+R M+G R I V+ A S G RGG + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGAFGVHGRG 100
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+ ++IFVGG+S TE++ + F +FG++I+ +M+++D+GRPRGFGF+T+ A++
Sbjct: 91 EKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEA 150
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
A+ + I V KAQP+
Sbjct: 151 ALS--RPLAICGKPIEVKKAQPR 171
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W T++ L++ F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 71 EH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 100
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG L+W V + LE F GK+++ +++ +RDSGR RGFGF+TY+ +++AI
Sbjct: 188 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 247
Query: 67 EMHGREFGDRVISVNKAQ 84
+ G + R I V+ A+
Sbjct: 248 SLDGVDLNGRAIRVSPAE 265
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVG L ++ L F+R G + +++ ++ +GR RGFGF+T + + ++ A ++
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 68 MHGREFGDRVISVNKAQP 85
+G E R + VN P
Sbjct: 148 FNGYELDGRALRVNSGPP 165
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G+D ++F+GGL+W+ TE L + F ++G+I++ IM + +GR RGFGF+T+ D RA+D
Sbjct: 159 GRDSGKMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVD 218
Query: 63 DAIREMH 69
+ I++ H
Sbjct: 219 EVIKKDH 225
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ V ER + F +FG II+ Q+M+++D+GR RGFGFITY A+D
Sbjct: 248 KIFVGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCVN 307
Query: 68 MHGREFGDRVISVNKAQPK 86
+ G + + V +A+P+
Sbjct: 308 KYLTLKG-KAMEVKRAEPR 325
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG LSW V LEN F GK+++ +++ +RDSGR RGFGF+TY +++AI
Sbjct: 192 NKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS 251
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ G + R I V A+ K
Sbjct: 252 NLDGVDLDGRQIRVTVAESK 271
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L + V QL F++ G + +++ +R +GR RGFGF+T + A+ +
Sbjct: 88 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 147
Query: 68 MHGREFGDRVISVNKAQP 85
+G F R + VN P
Sbjct: 148 FNGYTFQGRPLRVNSGPP 165
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RI+VG L W+V +LE F GK+++ +++ +RD+GR RGFGF+T + ++DAI
Sbjct: 236 RIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAA 295
Query: 68 MHGREFGDRVISVNKAQ 84
+ GR R I VN A+
Sbjct: 296 LDGRSLDGRAIRVNVAE 312
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVG L ++V ++L F++ G + +++ R++ RGFGF++ + + A+
Sbjct: 142 KIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEM 201
Query: 68 MHGREFGDRVISVNKAQPK 86
H + R+++VNKA P+
Sbjct: 202 FHRHDLDGRLLTVNKAAPR 220
>gi|338729124|ref|XP_003365829.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Equus
caballus]
Length = 135
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ ++F+GG+S++ E+ L AF ++G++++ +I+++R++GR RGFGFITY
Sbjct: 36 MSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEE 95
Query: 61 MDDAIREMHGREFGDRVISVNKAQPK 86
AI+ + G++ R I VN A +
Sbjct: 96 ASSAIQALDGQDLHGRPIRVNYANER 121
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGLSWN + L F+ FG + E ++ +RD+GR RGFGF+ Y + ++AI
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIAN 62
Query: 68 MHGREFGDRVISVNKA 83
M G+EF R + V+KA
Sbjct: 63 MDGQEFDGRRVRVDKA 78
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQALGGRSIVVNEARP 81
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+R+FVGGLSW ++ L++AF FG++ + +++ +R++GR RGFGF+ + D A A+
Sbjct: 35 SRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALS 94
Query: 67 EMHGREFGDRVISVNKAQ 84
M G E R I V+ AQ
Sbjct: 95 SMDGVELNGRSIRVSFAQ 112
>gi|340520715|gb|EGR50951.1| predicted protein [Trichoderma reesei QM6a]
Length = 148
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYVQEADAQAAIA 61
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRG-------GGYSSGGRGSYGA 111
M+ EF R I V+KA SD+G RG GG GGR YG
Sbjct: 62 AMNNVEFDGRTIRVDKA--------SDNGSRGERFFNRNGGMPYGGRAGYGT 105
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGG+S+ + L + F ++G++IE +I+++R+SGR RGFGF+TY AI
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAIT 89
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ G+ R I VN A K
Sbjct: 90 ALDGKTLDGRSIRVNHANEK 109
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
Length = 87
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L W+ TE + AF+ FG++I +++ +R++GRPRGFGF+ D+ A+ AI +
Sbjct: 5 IYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETGRPRGFGFVEMDDQGAL-AAIESL 63
Query: 69 HGREFGDRVISVNKAQPK 86
G +FG R + VN+A+P+
Sbjct: 64 DGSDFGGRNLKVNEARPR 81
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG LS++ TE L F FG++ + I+ +RD+GR RGF F+T+ + AI+E
Sbjct: 6 KVFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIKE 65
Query: 68 MHGREFGDRVISVNKAQPK 86
MH +F R ++V +AQ K
Sbjct: 66 MHEEDFLGRSVTVREAQSK 84
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSW+ T+ L AF +G++ + +M +RDSGR RGFGF+T+ ++ D AI
Sbjct: 3 KVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMA 62
Query: 68 MHGREFGDRVISVNKA 83
++ +E R I VN A
Sbjct: 63 LNEQELDGRRIRVNMA 78
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c
[Taeniopygia guttata]
Length = 175
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RI+VG L W V + +L F GK+++ +++ +RD+GR RGFGF+T A + +DDAI
Sbjct: 211 RIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA 270
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R + VN A+
Sbjct: 271 LDGQSLEGRALRVNVAE 287
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E +++VG L ++V +L F++ G + +++ R++ + RGFGF+T + + A
Sbjct: 114 EEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKA 173
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ H + R+++VNKA P+
Sbjct: 174 VEMFHRYDVNGRLLTVNKAAPR 195
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQALGGRSIVVNEARP 81
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADR----RAMDD 63
++FVGGLSW T+ L+ F R+G++I+C +M ++GR RGFGF+T+AD RA+++
Sbjct: 19 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALEN 78
Query: 64 AIREMHGREF 73
+ GR
Sbjct: 79 GPHTLDGRTI 88
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL N+TE L + F R+G ++E IM +++ + RGFGF+++ + A++ A E
Sbjct: 109 KVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAE 168
Query: 68 MHGREFGDRVISVNKAQPK 86
H + + + KA+P+
Sbjct: 169 -HFVNISGKQVEIKKAEPR 186
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++++GGL + + LE+ F + G I+ ++ + G+GF+ + +R A ++++
Sbjct: 97 NKVYIGGLPEHTRKEDLESCFGKIGNIVNIELKV--------GYGFVEFDNREAAEESVA 148
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRP 126
+ H F MG ++ GGG ++ G GA CFKCG+
Sbjct: 149 KYHEGYF-------------MGNKIRVEISHGGGRTAKYSGDPGA--------CFKCGQM 187
Query: 127 GHWARDCPS--AVGGRGGAGGSFSSR 150
GHWAR+CP+ A G R G+ R
Sbjct: 188 GHWARECPNHLAAGRRPGSDAPLIDR 213
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++FVGGLSW V + +L AF FG + E +++ +RD+G+ RGFGF+ Y A + AI
Sbjct: 36 STKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAI 95
Query: 66 REMHGREFGDRVISVNKAQPKMGGE 90
M G+E R + VN A + G
Sbjct: 96 SGMDGKEIDGRPVRVNIANDRPAGN 120
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE+ F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 MLAMNGKSLDGRQIRVDQA 81
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKSIKVEQAT 85
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ VTE + + F R+G++ + QIM + + R RGFGFITY A+DD +
Sbjct: 135 KIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSV 194
Query: 68 MHGREFGDRVISVNKAQPK 86
+ EF + + KA+PK
Sbjct: 195 GNKIEFAGAQVEIKKAEPK 213
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL+ T Q F ++G+I + IM +R +G+PRGFGFITYAD +D
Sbjct: 40 GASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVD 99
Query: 63 DAIREMH 69
I + H
Sbjct: 100 TVIEDTH 106
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L AF FG I++ +M +R++GR RGFGF+T+ D AI
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINN 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ +E R I VN A K
Sbjct: 64 LNEQELDGRRIRVNLANAK 82
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ TE +L AF+++G++ I+++R++GR RGF F+ AD DAI +
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 69 HGREFGDRVISVNKAQPK 86
+G E R ++VN+A+P+
Sbjct: 117 NGHEIDGRSVTVNEARPR 134
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ TE +L AF+++G++ I+++R++GR RGF F+ AD DAI +
Sbjct: 68 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 127
Query: 69 HGREFGDRVISVNKAQPK 86
+G E R ++VN+A+P+
Sbjct: 128 NGHEIDGRSVTVNEARPR 145
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ TE +L AF+++G++ I+++R++GR RGF F+ AD DAI +
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 69 HGREFGDRVISVNKAQPK 86
+G E R ++VN+A+P+
Sbjct: 117 NGHEIDGRSVTVNEARPR 134
>gi|395005503|ref|ZP_10389380.1| RRM domain-containing RNA-binding protein, partial [Acidovorax
sp. CF316]
gi|394316556|gb|EJE53277.1| RRM domain-containing RNA-binding protein, partial [Acidovorax
sp. CF316]
Length = 110
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDPEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQPLGGRSIVVNEARP 81
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ TE +L AF+++G++ I+++R++GR RGF F+ AD DAI +
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 69 HGREFGDRVISVNKAQPK 86
+G E R ++VN+A+P+
Sbjct: 117 NGHEIDGRSVTVNEARPR 134
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
1 [Anolis carolinensis]
Length = 384
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE+ F ++G+I+E +M +R++ + RGF FIT+ DA R+
Sbjct: 9 KLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKSIKVEQAT 85
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F +FG+++ C + LERD+GR RGF F+ +D A + AI +
Sbjct: 3 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L +AF +G++ + +M +R++GR RGFGF+T+A + D AI
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
>gi|348553582|ref|XP_003462605.1| PREDICTED: putative RNA-binding protein 3-like [Cavia porcellus]
Length = 159
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL+++ E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGG-YSSGGRG 107
+R M+G R I V+ A S G RGGG + + GRG
Sbjct: 64 MRAMNGESLDGRQIRVDHAGK------SARGTRGGGAFGAHGRG 101
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSVVVNEARP 81
>gi|298248970|ref|ZP_06972774.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297546974|gb|EFH80841.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 104
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RI+VGGL + TE+ L F++ G++ ++ +R++GR +GFGF+ + AI +
Sbjct: 2 RIYVGGLPYQSTEQDLIQLFEQIGQVTSATVITDRETGRSKGFGFVEMSSDDETRAAIEQ 61
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYG 110
++G GDR I+VN+A+ + GGGY S GR S G
Sbjct: 62 LNGSTLGDRTITVNEARER-------RAPGGGGYQSRGRSSNG 97
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L+++VT+ L+ F G + ++M++RDSGR +GFGF+ AIR
Sbjct: 3 NKLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAIR 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++HG R + VN+A+P+
Sbjct: 63 KLHGASVDGRALVVNEARPR 82
>gi|241766569|ref|ZP_04764426.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363173|gb|EER58764.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 116
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQPLGGRSIVVNEARP 81
>gi|357124087|ref|XP_003563738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 2 [Brachypodium distachyon]
Length = 354
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ ++TE +L+ F +GK+ E QIM++ +GR RGFGF+T+ A++ + E
Sbjct: 117 KIFVGGIPTSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSE 176
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
+ G + + + +A+PK G
Sbjct: 177 GRMHDLGGKQVEIKRAEPKKPG 198
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI- 65
++IFVGG+S T+++ ++ F +FG++++ +M+++D+GRPRGFGF+T+ +D +
Sbjct: 83 SKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLS 142
Query: 66 --REMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 143 TSLEIHGKP-----IEVKKAQPR 160
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKE 60
Query: 69 HGREFGD-RVISVNKAQPKMGGEVSDHGYRGG 99
H F D ++I +A P+ E + + GG
Sbjct: 61 H---FLDGKIIDPKRAIPRDEQEKTSKIFVGG 89
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 8/100 (8%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RG GF+T+ +
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAK 61
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDH---GYRGG 99
DA+ M+G+ R I V++A G+ SD+ GYRGG
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA-----GKSSDNRSRGYRGG 96
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F +FG I E ++ +RD+ R RGFGF+ ++ D A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 68 MHGREFGDRVISVNKA 83
M+ +EF RVI V+KA
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|242279034|ref|YP_002991163.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242121928|gb|ACS79624.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 87
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L W+ TE + +F+ +G+++ +++ +R++GRPRGFGF+ D A+ DAI +
Sbjct: 5 IYVGNLPWSATEEDVRASFEAYGEVVSVKLIEDRETGRPRGFGFVEMDDNGAI-DAIEAL 63
Query: 69 HGREFGDRVISVNKAQPK 86
G++FG R + VN+A+P+
Sbjct: 64 DGKDFGGRNLKVNEARPR 81
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|302831616|ref|XP_002947373.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
gi|300267237|gb|EFJ51421.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
Length = 582
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
N+I+VGGL ++ T+ + F R GK++ Q++++ ++ R +G+ F+T+AD A + AI
Sbjct: 75 HNKIYVGGLEFSATKEDIAEVFSRAGKVLNVQLVMDHETQRSKGYAFVTFADDDAYEYAI 134
Query: 66 REMHGREFGDRVISVNKA 83
+ M+G + + VNKA
Sbjct: 135 KRMNGVTVRGKEVKVNKA 152
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L+W V LEN F G++++ +++ +RDSGR RGFGF+TY + +++AI
Sbjct: 184 NKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNNAIS 243
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ G + R I V A+ K
Sbjct: 244 NLDGIDLDGRQIRVTAAESK 263
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
++ ++FVG L ++V QL F++ G + +++ +R +GR RGFGF+T + + A
Sbjct: 77 EDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAEAA 136
Query: 65 IREMHGREFGDRVISVNKAQP 85
+ + +G F R + VN P
Sbjct: 137 VEQFNGYAFQGRQLRVNCGPP 157
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L + F++FG I E ++ +RD+ R RGFGF+ ++ D AI
Sbjct: 3 KLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEG 62
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRG-GGYS 102
M+ ++F RVI V++A ++ G+ G GGY+
Sbjct: 63 MNNQDFDGRVIRVDRASNNASSRGNEGGFHGRGGYN 98
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
isoform 1 [Acyrthosiphon pisum]
Length = 442
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
++ ++FVGGLSW + L+ F+R+G++I+C +M +SGR RGFGF+T+AD ++
Sbjct: 11 EQGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVV 70
Query: 65 IRE 67
++
Sbjct: 71 LQN 73
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL NVTE L F R+GK++E IM +++ + RGFGF+++ D A+D + E
Sbjct: 104 KVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAE 163
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHG 95
H + + + KA+P+ +++D G
Sbjct: 164 -HFVNLSGKQVEIKKAEPRDSNKMNDVG 190
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
+ K + ++F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D +
Sbjct: 35 LLAKTQGKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKT 94
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
++ + + H ++I +A P+ E + + GG
Sbjct: 95 VNIVMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 131
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI- 65
++IFVGG+S T+++ + F +FG++++ +M+++D+GRPRGFGF+T+ ++ +
Sbjct: 125 SKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFLTFESEAGVEACLS 184
Query: 66 --REMHGREFGDRVISVNKAQPK 86
E+HG + I V KAQP+
Sbjct: 185 TELEIHG-----KAIEVKKAQPR 202
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKPIKVEQAT 85
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 53/84 (63%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G++ IFVG LSWNV + L+ F G+++ ++ ++R +G+ +GFG++ +AD +
Sbjct: 268 GEEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAK 327
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
A+ M+GRE R ++++ A P+
Sbjct: 328 KAVETMNGREIDGRPVNLDLATPR 351
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG L+++ T+ + F G+++ ++ +RDSG+P+GFG++ +AD A+ E+
Sbjct: 374 LFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKALNEL 433
Query: 69 HGREFGDRVISVNKAQPKM 87
G +F R I ++ + P+
Sbjct: 434 GGTDFEGRNIRLDFSAPRT 452
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 35 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 94
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 95 MNGKSLDGKAIKVEQAT 111
>gi|156367097|ref|XP_001627256.1| predicted protein [Nematostella vectensis]
gi|156214160|gb|EDO35156.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E R ++G LS++V E+ LE F +++ +++ +R++GRPRGFGF+T+ + M+ A
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHG-CDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 65 IREMHGREFGDRVISVNKAQPK 86
I E G++F R + VN+AQP+
Sbjct: 62 IDEFDGQDFDGRPMKVNQAQPR 83
>gi|225680657|gb|EEH18941.1| heterogeneous nuclear ribonucleoprotein A/B [Paracoccidioides
brasiliensis Pb03]
gi|226292332|gb|EEH47752.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides
brasiliensis Pb18]
Length = 493
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++++ +M+++DSGRPRGFGF+T+ A++ +
Sbjct: 43 SKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLS 102
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + I V KAQP+
Sbjct: 103 --GPLEILGKPIEVKKAQPR 120
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F R+G I E ++ +RD+ R RGFGF+ +A D A+
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRG-GGYSS 103
M+ +EF R+I V+KA + + G++G GGY+S
Sbjct: 63 MNNQEFDGRIIRVDKASERPAAR--NGGFQGRGGYNS 97
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RI+VG L W V + +L F GK+++ +++ +RD+GR RGFGF+T A + +DDAI
Sbjct: 210 RIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDAIAA 269
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R + VN A+
Sbjct: 270 LDGQSLEGRALRVNVAE 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E +++VG L ++V +L F++ G + +++ R++ + RGFGF+T + + A
Sbjct: 113 EEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKA 172
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ H + R+++VNKA P+
Sbjct: 173 VEMFHRYDVNGRLLTVNKAAPR 194
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGL+ E+ LE F ++G+I+E +M +R++ + RGF FIT+ DA R+
Sbjct: 9 KLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKLLDGKSIKVEQAT 85
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG L+W V + LE F GK+++ +++ +RDSGR RGFGF+TY+ +++AI
Sbjct: 194 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 253
Query: 67 EMHGREFGDRVISVNKAQ 84
+ G + R I V+ A+
Sbjct: 254 SLDGVDLNGRAIRVSPAE 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVG L ++ L F+R G + +++ ++ +GR RGFGF+T + + ++ A ++
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 68 MHGREFGDRVISVNKAQP 85
+G E R + VN P
Sbjct: 148 FNGYELDGRALRVNSGPP 165
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 61/102 (59%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N ++V L+ V ++ L++ F +FG++ +C+++++ + RGFGF+T+ D R +DA++
Sbjct: 65 NNLYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAVK 124
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGS 108
E++ +E R + V A+ K G E + Y G +S GS
Sbjct: 125 ELNNQEVQGRKMRVEHAKRKRGHEKTPGQYLGPRLASAKYGS 166
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
Length = 144
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V ++ LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQSLGGRSIVVNEARP 81
>gi|343427687|emb|CBQ71214.1| related to Transformer-2 protein homolog [Sporisorium reilianum
SRZ2]
Length = 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N + V GLS T+R LE AF ++G I + Q+M + S PRGF F+T+ + AI
Sbjct: 73 NNLHVSGLSKGTTDRDLEEAFGKYGPIQKAQVMYDPHSREPRGFAFVTFEKAEDAEAAIT 132
Query: 67 EMHGREFGDRVISVNKAQ 84
M+ EF R I+V KA+
Sbjct: 133 AMNNTEFLGRKITVEKAR 150
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE L AF ++G I + ++ ++++GR RGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|351730017|ref|ZP_08947708.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 115
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++I+VG L ++VT+ LE+ F FG + ++M++R++GR +GFGF+ A AI
Sbjct: 3 SKIYVGNLPYSVTDSVLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAIS 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
+HG R I VN A+P+
Sbjct: 63 ALHGMSVDGRSIVVNLARPR 82
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F ++G I E ++ +RD+ R RGFGF+ +A D A+
Sbjct: 3 KLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMNA 62
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
M +EF R+I V+KA + G+ S+
Sbjct: 63 MSNQEFDGRMIRVDKAADRQPGQRSE 88
>gi|407940456|ref|YP_006856097.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407898250|gb|AFU47459.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 116
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++I+VG L ++VT+ LE+ F FG + ++M++R++GR +GFGF+ A+ AIR
Sbjct: 3 SKIYVGNLPYSVTDATLESNFAEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAIR 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
+HG R I VN A+P+
Sbjct: 63 ALHGMSVDGRSIVVNLARPR 82
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ TE L + F+ FG + E ++ +RD+GR RGFGF+ Y+ AI
Sbjct: 2 SKLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAID 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V++A
Sbjct: 62 AMNNVEFDGRTIRVDRA 78
>gi|159902554|ref|YP_001549898.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887730|gb|ABX07944.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9211]
Length = 245
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG++ C + LERD+GR RGF FI AD A AI +
Sbjct: 3 IFVGNLPFRAEQEDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESSAIEAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 15/112 (13%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+N + L AF ++G+++E +++++ D+GR +GFGF+T++ + AI+
Sbjct: 70 SKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIK 129
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD 118
+ G++ G R I N A K+ RGG G YG+ R GG D
Sbjct: 130 ALDGKDLGGRRIRCNYAVEKVA--------RGG-------GRYGSSRYGGGD 166
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
isoform 2 [Acyrthosiphon pisum]
Length = 432
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
++ ++FVGGLSW + L+ F+R+G++I+C +M +SGR RGFGF+T+AD ++
Sbjct: 11 EQGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVV 70
Query: 65 IR 66
++
Sbjct: 71 LQ 72
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL NVTE L F R+GK++E IM +++ + RGFGF+++ D A+D + E
Sbjct: 104 KVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAE 163
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHG 95
H + + + KA+P+ +++D G
Sbjct: 164 -HFVNLSGKQVEIKKAEPRDSNKMNDVG 190
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI- 65
++IFVGG+S T+ + F +FG++++ +M+++D+GRPRGFGF+T+ +D +
Sbjct: 83 SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLS 142
Query: 66 --REMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 143 ANLEIHGKP-----IEVKKAQPR 160
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L + F ++G+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 89
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 63 DAIREMHGREFGDRVISVNKA 83
DA+ M+G+ R I V++A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGL+ E+ LE F ++G+I+E +M +R++ + RGF FIT+ DA R+
Sbjct: 28 KLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARD 87
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 88 MNGKLLDGKSIKVEQAT 104
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+SW T N F +FG++++ IM +R +G PRGFGF+T+AD + + E
Sbjct: 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query: 68 MHGREFGDRVISVNKAQPK 86
H DR + + + P+
Sbjct: 127 DH--VIDDRKVDLKRTLPR 143
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL + E +L+N F +G IIE QIM + +GR RGFGF+T+ ++D +
Sbjct: 158 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSD 217
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYS 102
E GD+ + + +A+PK G D+ +R G S
Sbjct: 218 GKVHELGDKQVEIKRAEPKRTGR--DNSFRSYGAS 250
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++++ +M+++DSGRPRGFGF+T+ A++ +
Sbjct: 83 SKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLS 142
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + I V KAQP+
Sbjct: 143 --GPLEILGKPIEVKKAQPR 160
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L++ F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQERTSKIFVGG 89
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG LSWN T+ L +AF +G+I++ +M +RD+GR RGFGF+T++ AI
Sbjct: 3 TKVYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAIS 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 63 SLNEQELDGRRIKVNLANAR 82
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ +
Sbjct: 26 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 85
Query: 62 DDAIREMHGREFGDRVISVNKA 83
DA+R M+G R I V+ A
Sbjct: 86 SDAMRAMNGESLDGRQIRVDHA 107
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG LSW V LEN F GK+++ +++ +RDSGR RGFGF+TY +++AI
Sbjct: 189 NKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS 248
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ G + R I V A+ K
Sbjct: 249 NLDGVDLDGRQIRVTVAESK 268
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
++ ++FVG L + V QL F++ G + +++ +R +GR RGFGF+T + + A
Sbjct: 82 EDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAA 141
Query: 65 IREMHGREFGDRVISVNKAQP 85
+ + +G F R + VN P
Sbjct: 142 VEQFNGYTFQGRPLRVNSGPP 162
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F +FG+++ C + LERD+GR RGF F+ +D A + AI +
Sbjct: 33 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 92
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 93 QGAELMGRPLRINKAEPR 110
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSVVVNEARP 81
>gi|365091634|ref|ZP_09328989.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415945|gb|EHL23069.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 192
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIS 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQPLGGRSIVVNEARP 81
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ + T F+++G+I + IM +R +GRPRGFGFITYAD +D I+E
Sbjct: 19 KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
H + + + + PK + +D
Sbjct: 79 NH--VVNGKQVEIKRTIPKGSSQAND 102
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 52/79 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V+E +L+N F ++GK++E +I+ + + R RGFGFI + + +D+ + +
Sbjct: 107 KIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILAD 166
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + G + + KA+PK
Sbjct: 167 GNMIDMGGTQVEIKKAEPK 185
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 152
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + L+ +F +FG + ++M+ERD+GR +GFGF+ A AI
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSVVVNEARP 81
>gi|380709246|gb|AEE42608.1| glycine-rich RNA-binding protein 1, partial [Chelidonium majus]
Length = 146
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 10 FVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMH 69
FVGGL+W ++ LE AF + I+E +I+ +R++G RGFGF+T+A+ +AM D I M+
Sbjct: 12 FVGGLAWATDDQSLEKAFSSYRGIVESKIINDRETGWSRGFGFVTFANEQAMKDVIEGMN 71
Query: 70 GREFGDRVISVNKA 83
G+ R I VN+
Sbjct: 72 GQNLDSRSIIVNEV 85
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L AF FG++++ +M +RD+GR RGFGF+T++ + D AI
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGG 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E ++V L N+TE+Q+E F +FG+I++ I+ ++ +G PRG F+ Y R DAI
Sbjct: 184 ETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAI 243
Query: 66 REMHGR--EFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR 113
++HG E G +SV A+ +HG + Y +G + Y R
Sbjct: 244 NQLHGTIPEGGSEPLSVKIAE--------EHGKQKAAYYAGWQAGYNQSR 285
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D + + L ++TE++L + F G + C++M + +G GFGF+ Y A
Sbjct: 97 DRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTA 156
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSD 93
I ++G + ++ + V+ A+P G E+ +
Sbjct: 157 INTLNGLQVQNKRLKVSFARPS-GEEIKE 184
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
DE ++F+GGLS++ E+ LE F +G I E ++ +R++ R RGFGFITY
Sbjct: 1 MASDEGKLFIGGLSFDTNEQNLEQLFSPYGDIAEVVVVKDRETQRSRGFGFITYCRPEDA 60
Query: 62 DDAIREMHGREFGDRVISVNKA 83
DA+R M+G R I V++A
Sbjct: 61 KDAMRAMNGESVDGRQIRVDQA 82
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E ++V L N+TE+Q+E F +FG+I++ I+ ++ +G PRG F+ Y R DAI
Sbjct: 167 ETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAI 226
Query: 66 REMHGR--EFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR 113
++HG E G +SV A+ +HG + Y +G + Y R
Sbjct: 227 NQLHGTIPEGGSEPLSVKIAE--------EHGKQKAAYYAGWQAGYNQSR 268
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D + + L ++TE++L + F G + C++M + +G GFGF+ Y A
Sbjct: 80 DRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTA 139
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSD 93
I ++G + ++ + V+ A+P G E+ +
Sbjct: 140 INTLNGLQVQNKRLKVSFARPS-GEEIKE 167
>gi|225680987|gb|EEH19271.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
gi|226292701|gb|EEH48121.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb18]
Length = 148
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGL+W+ T++ L F+++G I E ++ +RD+ R RGFGF+ ++ D A+
Sbjct: 2 SKLFVGGLAWHTTDQTLRQGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFSRDVEADAAMN 61
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSD 93
M +EF RVI V+KA + +D
Sbjct: 62 AMSNQEFDGRVIRVDKASDRASAHRND 88
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+R+F+GGLS+ + ++ L +F +G++IE +I+ +R++GR RGFGFI++ AI
Sbjct: 40 SRLFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAAIT 99
Query: 67 EMHGREFGDRVISVNKAQPKM 87
M G++ R++ VN A +
Sbjct: 100 GMDGKDLHGRLVHVNYATERT 120
>gi|75906252|ref|YP_320548.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75699977|gb|ABA19653.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 99
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS++VT+ L F +G + Q+ +R++GR RGFGF+ A D AI+ +
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGG 100
G E+ RV+ VNKA+P+ + G R GG
Sbjct: 63 DGAEWMGRVLKVNKARPR-----EEKGARSGG 89
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L +AF FG++ + +M +R++GR RGFGF+T+A + D AI
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 68 MHGREFGDRVISVNKA 83
++ +E R I VN A
Sbjct: 64 LNEQELDGRRIRVNMA 79
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
Length = 121
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + V E +L+ F+ FG++ +I+ +R++GR +GFGFI D A AI E+
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 69 HGREFGDRVISVNKAQPK 86
+G E R I VN+A+ K
Sbjct: 63 NGAELYGRTIVVNQAEEK 80
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 173
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F +FG++ C + LERD+GR RGF FI AD + AI +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L W V + L AF ++G+II+ ++ +R +GR RGFGF+ +A+ D AI+E
Sbjct: 7 KLFVGSLPWGVDDSGLREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAIQE 66
Query: 68 MHGREFGDRVISVNKAQPK 86
M+G + R I VN+A+P+
Sbjct: 67 MNGADMDGRNIVVNEARPR 85
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+++E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKAQ 84
++G+ + I V +A
Sbjct: 69 LNGKALDGKPIKVEQAT 85
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGGLSWN + L+ AF FG + E +++ +R+SGR RGFGF+++A+ A+
Sbjct: 37 TKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMD 96
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R I VN A +
Sbjct: 97 AMDGKELEGRSIRVNFANER 116
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 132
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + L+ +F +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIA 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I+VN+A+P
Sbjct: 63 GMNGQSLGGRSITVNEARP 81
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|59802584|gb|AAX07527.1| unknown [Prosthecobacter dejongeii]
Length = 111
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 52/80 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG L + E +L F+ +G + + + ++ +GRPRGF F+T AM++AI
Sbjct: 5 TKMYVGNLPFTAMESELRALFNDYGTVTDMHLPMDHATGRPRGFAFVTMDSAMAMNEAIT 64
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G++FG R +++N+A+PK
Sbjct: 65 ALNGKDFGGRSLTINEARPK 84
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + +A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ TE L AF ++G I + ++ ++++GR RGFGF+ Y + DA
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 LDGMNGKSVDGRTIRVDEA 81
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L W+ TE ++ AF +G++ +++ +R++GRPRGFGF+ D A+ +AI +
Sbjct: 5 IYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETGRPRGFGFVEMDDAGAL-EAIENL 63
Query: 69 HGREFGDRVISVNKAQPK 86
G++FG R I VN+A+P+
Sbjct: 64 DGKDFGGRNIKVNEAKPR 81
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F +FG I E ++ +RD+ R RGFGF+ ++ D A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 68 MHGREFGDRVISVNKAQ 84
M+ +EF RVI V+KA
Sbjct: 65 MNNQEFDGRVIRVDKAT 81
>gi|342889186|gb|EGU88353.1| hypothetical protein FOXB_01152 [Fusarium oxysporum Fo5176]
Length = 170
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIA 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 TMNNVEFDGRTIRVDKA 78
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ YA+ + AI
Sbjct: 284 KLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIAS 343
Query: 68 MHGREFGDRVISVNKA 83
M+ EF R I V++A
Sbjct: 344 MNNIEFDGRTIRVDRA 359
>gi|91786529|ref|YP_547481.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91695754|gb|ABE42583.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + L+ +F FG I ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIA 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I+VN+A+P
Sbjct: 63 GMNGQSLGGRSITVNEARP 81
>gi|398803602|ref|ZP_10562623.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398096229|gb|EJL86556.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 133
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + L+ +F FG I ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIA 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I+VN+A+P
Sbjct: 63 GMNGQSLGGRSITVNEARP 81
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ NVTE + + F R+G++ + QIM + + R RGFGFIT+ A+DD +
Sbjct: 2065 KIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSM 2124
Query: 68 MHGREFGDRVISVNKAQPK 86
+ +F + + KA+PK
Sbjct: 2125 GNKIDFAGSQVEIKKAEPK 2143
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ T Q F ++G+I + IM +R +G+PRGFGFITYAD +D I +
Sbjct: 1977 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIED 2036
Query: 68 MH 69
H
Sbjct: 2037 PH 2038
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI- 65
++IFVGG+S T+ + F +FG++++ +M+++D+GRPRGFGF+T+ ++ +
Sbjct: 206 SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLA 265
Query: 66 --REMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 266 AKLEIHGKP-----IEVKKAQPR 283
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K++ ++F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + ++
Sbjct: 118 AKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVN 177
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 178 IVMVKEH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 212
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQPLGGRSIVVNEARP 81
>gi|298710527|emb|CBJ25591.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 502
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E ++F+GG+SW TE L + F ++G + + +M ++ +G PRGFGFI + D +D+ +
Sbjct: 147 EGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEIL 206
Query: 66 REMHGREFGDRVISVNKAQPK 86
+ H + +V+ V +A PK
Sbjct: 207 SQEH--KIDGKVVDVKRAVPK 225
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+ N+IFVGGL+ V + F+ FG +++ +M +R + R RGFGF+T+ + + D
Sbjct: 240 ETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDI 299
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ H E +++ V +A+PK
Sbjct: 300 MMGTH--EINGKMVEVKRAEPK 319
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIT 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQPLGGRSIVVNEARP 81
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL+++ E+ LE F FG I E ++ ++++ R RGFGFIT+A+ DA
Sbjct: 4 EEGKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESVDGRQIRVDHA 82
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R++VG L W+V +LE F GK++E +++ +R++GR RGFGF+T ++ ++DAI
Sbjct: 222 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAA 281
Query: 68 MHGREFGDRVISVNKAQ 84
+ G+ R I VN A+
Sbjct: 282 LDGQNMEGRAIRVNVAE 298
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 50/82 (60%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVG L+++V + L F++ G + +++ R++ + RGFGF+T + + A
Sbjct: 125 EEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETA 184
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ + + + R+++VNKA P+
Sbjct: 185 VEKFNRYDLNGRLLTVNKAAPR 206
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GG+S++ E L AF R+G +++ +I+++RD+GR RGFGFIT+A A++
Sbjct: 41 KLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQA 100
Query: 68 MHGREFGDRVISVNKAQPK 86
M +E R + VN A +
Sbjct: 101 MDNKELDGRTVRVNYATER 119
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE+ F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 MLAMNGKSLDGRQIRVDQA 81
>gi|393218783|gb|EJD04271.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 465
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 29/129 (22%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++++GGL + L++ F + G+I+ ++ L G+GF+ + R A ++++
Sbjct: 78 NKVYIGGLPEHTRREDLQSCFGKIGEIVNIELKL--------GYGFVEFETREAAEESVA 129
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRP 126
+ H F MG ++ GGG ++ G GA CFKCG
Sbjct: 130 KYHEGFF-------------MGNKIRVEMSHGGGRTAKYNGDPGA--------CFKCGMT 168
Query: 127 GHWARDCPS 135
GHWAR+CP+
Sbjct: 169 GHWARECPN 177
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
Length = 174
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG LSWN T+ L AF FG++++ +M +R++GR RGFGF+T++ + AI
Sbjct: 3 TKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAIS 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 63 SLNEQELDGRRIKVNLANAR 82
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L+ +ER+L F+ +G+++ +++ ++GR +GFGF+ + D R +DAI++
Sbjct: 37 IFVGNLNHETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAEDAIKQA 96
Query: 69 HGREFGDRVISVN--KAQPKMGGEVSDHGYRGG 99
G+ R I N K QP G H +RGG
Sbjct: 97 DGQTMDGRTIKCNFAKYQPHRG---QPHAFRGG 126
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ VTE + + F R+G++ + QIM + + R RGFGFITY A+DD +
Sbjct: 133 KIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSV 192
Query: 68 MHGREFGDRVISVNKAQPK 86
+ EF + + KA+PK
Sbjct: 193 GNKIEFAGAQVEIKKAEPK 211
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ T Q F ++G+I + IM +R +G+PRGFGFITYAD +D I +
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 102
Query: 68 MH 69
H
Sbjct: 103 TH 104
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ NVTE + + F R+G++ + QIM + + R RGFGFIT+ A+DD +
Sbjct: 131 KIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLSM 190
Query: 68 MHGREFGDRVISVNKAQPK 86
+ +F + + KA+PK
Sbjct: 191 GNKIDFAGAQVEIKKAEPK 209
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL+ T Q F ++G+I + IM +R +G+PRGFGFITYAD +D
Sbjct: 38 GASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVD 97
Query: 63 DAIREMH 69
I E H
Sbjct: 98 KVIEEPH 104
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|65301143|ref|NP_083936.1| RNA-binding motif protein, X-linked-like-2 [Mus musculus]
gi|12838734|dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE AF ++G+IIE +M +R++ + RGF F+T+ + A R+
Sbjct: 9 KLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVAQAT 85
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ ++E L AF+ FG + + +I+ + D+GR +GFGF+ A+ + AI +
Sbjct: 3 IYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
+GRE G R I+VN+A+P+
Sbjct: 63 NGREMGGRSITVNEARPR 80
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ VTE L+ F +GKI + ++R+SGRPRGF F+ + + D AI +
Sbjct: 3 IYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAIVAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
E+ R + VNKA+P+
Sbjct: 63 DEAEWMGRALKVNKAKPR 80
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F R+G I E ++ +RD+ R RGFGF+ +A D A+
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRG-GGYSS 103
M+ +EF R+I V+KA + + G++G GGY+S
Sbjct: 63 MNNQEFDGRIIRVDKASERPAAR--NGGFQGRGGYNS 97
>gi|310793386|gb|EFQ28847.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 171
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAIS 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGL+ E+ LE F ++G+I+E +M +R++ + RGF FIT+ DA R+
Sbjct: 9 KLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKLLDGKSIKVEQAT 85
>gi|156367093|ref|XP_001627254.1| predicted protein [Nematostella vectensis]
gi|156214158|gb|EDO35154.1| predicted protein [Nematostella vectensis]
Length = 139
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E + ++G L + V E L++ F R+ +++ Q++ +R++ RPRGF F+T+ ++ M+DA
Sbjct: 3 EECKCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDA 61
Query: 65 IREMHGREFGDRVISVNKA 83
I E+ G+EF R + VN+A
Sbjct: 62 INELDGQEFDGRSMKVNQA 80
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ ++TE +L+ F +GK+ E QIM++ +GR RGFGF+T+ A++ + E
Sbjct: 173 KIFVGGIPTSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSE 232
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
+ G + + + +A+PK G
Sbjct: 233 GRMHDLGGKQVEIKRAEPKKPG 254
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG++W TE F ++G I + IM ++ + PRGFGF+T++D +D + +
Sbjct: 84 KIFVGGVAWETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLED 143
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 144 EH--TIDGRTVEVKRTVPR 160
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F +FG I E ++ +RD+ R RGFGF+ ++ D A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 68 MHGREFGDRVISVNKAQ 84
M+ +EF RVI V+KA
Sbjct: 65 MNNQEFDGRVIRVDKAT 81
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ NVTE + + F R+G++ + QIM + + R RGFGFIT+ A+DD +
Sbjct: 134 KIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLSM 193
Query: 68 MHGREFGDRVISVNKAQPK 86
+ +F + + KA+PK
Sbjct: 194 GNKIDFAGTQVEIKKAEPK 212
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL+ T Q F ++G+I + IM +R + +PRGFGFITYAD +D
Sbjct: 41 GASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVD 100
Query: 63 DAIREMH 69
I + H
Sbjct: 101 KVIEDTH 107
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + LE AF +FG + ++M+ERD+GR +GFGF+ A++
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSLVVNEARP 81
>gi|298528813|ref|ZP_07016217.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512465|gb|EFI36367.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
++VG LSWN TE QL ++F FG++ +I+ +R++GR RGFGF+ + D+A+ ++
Sbjct: 4 LYVGNLSWNTTETQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFVEMEN--GADEAVEKL 61
Query: 69 HGREFGDRVISVNKAQPK 86
+G++F R I VN A+PK
Sbjct: 62 NGKDFDGRTIKVNVAKPK 79
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + LE AF +FG + ++M+ERD+GR +GFGF+ A++
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSLVVNEARP 81
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+SW T N F +FG++++ IM +R +G PRGFGF+T+AD + + E
Sbjct: 90 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 149
Query: 68 MHGREFGDRVISVNKAQPK 86
H + DR + + + P+
Sbjct: 150 DHVID--DRKVDLKRTLPR 166
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL + E +L+N F +G IIE QIM + +GR RGFGF+T+ ++D +
Sbjct: 181 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSD 240
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYS 102
E GD+ + + +A+PK G D+ +R G S
Sbjct: 241 GKVHELGDKQVEIKRAEPKRTGR--DNSFRSYGAS 273
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
Length = 175
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R I VN+A+P
Sbjct: 63 GMNGQPLGGRSIVVNEARP 81
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L AF +G++++ +M +RD+GR RGFGF+T++ AI
Sbjct: 4 KVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAISA 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ +EF R I VN A +
Sbjct: 64 LNEQEFEGRRIKVNFANAR 82
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y AI
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIAA 62
Query: 68 MHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 181
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y AI
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIAA 62
Query: 68 MHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|395334012|gb|EJF66388.1| hypothetical protein DICSQDRAFT_123087 [Dichomitus squalens
LYAD-421 SS1]
Length = 503
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 29/138 (21%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A N++++GGL + + LE+ F + G I+ ++ + G+GF+ + R A
Sbjct: 111 ASATLNKVYIGGLPEHTRKEDLESCFGKIGNIVNIELKV--------GYGFVEFDSREAA 162
Query: 62 DDAIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCF 121
++++ + H F MG ++ GGG ++ G GA CF
Sbjct: 163 EESVAKYHEGYF-------------MGNKIRVEISHGGGRTAKYSGDPGA--------CF 201
Query: 122 KCGRPGHWARDCPSAVGG 139
KCG+ GHWAR+CP+ +
Sbjct: 202 KCGQMGHWARECPNHLAA 219
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum
CS3096]
Length = 178
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y +AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIA 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNVEFDGRNIRVDKA 78
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+S TE+ ++ F++FG++I+ +M+++D+GRPRGFGF+T+ A+D ++
Sbjct: 187 KIFVGGVSQEATEQDFKSFFEQFGRVIDATLMMDKDTGRPRGFGFVTFDGEAAVDACLQ- 245
Query: 68 MHGREFGDRVISVNKAQPK 86
+ I V +AQP+
Sbjct: 246 -GPLAILGKPIEVKRAQPR 263
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K++ ++F+GGL+W T++ L + F +FG++ EC +M + +GR RGFGF+T+ D + ++
Sbjct: 99 KEDGKMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNI 158
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 159 VMVKEH--YLDGKIIDPKRAIPREEQEKTAKIFVGG 192
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R R FGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG +S+ TE +L AF+ +G+I QIM +RD+G+ RGF F+ + AI +
Sbjct: 4 VFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAGL 63
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYS 102
+G + R ++VN+A+PK G + G GGYS
Sbjct: 64 NGTQLDGRALNVNEAKPKPQGGGARGGNDRGGYS 97
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG L + TE +L++ F + G + +++++ SGRPRGFGF+T + A++
Sbjct: 3 TKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAVQ 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G +FG R ++VN+A+P+
Sbjct: 63 ALNGTDFGGRPLTVNEARPR 82
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 57/80 (71%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++++G LS++ TE +++ F + G + E +++++ +GR RGFGF+T + + D A++
Sbjct: 2 NKLYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQ 61
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G+++ R ++VN+A+P+
Sbjct: 62 NLNGKQWQGRALTVNEARPR 81
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSVVVNEARP 81
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + LE AF +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSVVVNEARP 81
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ +
Sbjct: 110 SKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLS 169
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + I V KAQP+
Sbjct: 170 --RPLEILGKSIEVKKAQPR 187
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W T++ L++ F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 87 EH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 116
>gi|55778182|gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ DE ++FVGGLS++ E LE+AF ++G + + ++ +R++GR RGFGF+T+ +
Sbjct: 1 MSSSDEGKLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSD 60
Query: 61 MDDAIREMHGREFGDRVISVNKA 83
+A+ M+G R I V+ A
Sbjct: 61 AKEALHAMNGESLDGRQIRVDLA 83
>gi|295673172|ref|XP_002797132.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226282504|gb|EEH38070.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 642
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++++ +M+++DSGRPRGFGF+T+ A++ +
Sbjct: 215 SKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLS 274
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + I V KAQP+
Sbjct: 275 --GPLEILGKPIEVKKAQPR 292
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 44/62 (70%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W T++ L++ F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 92 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 151
Query: 68 MH 69
H
Sbjct: 152 EH 153
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG L++N T+ +L +AF+ FG++ +I+ +RD+GR RGF F+ D +A+ EM
Sbjct: 3 IYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAEM 62
Query: 69 HGREFGDRVISVNKAQPK 86
+G++ R + VN+A+P+
Sbjct: 63 NGKDLKGRNLVVNEARPR 80
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++VG LSW+ T+ L AF +G++++ +M +R++GR RGFGF+T++ + + AI
Sbjct: 3 TKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAIN 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
+H ++ R I VN A +
Sbjct: 63 SLHEQDLDGRRIKVNLANAR 82
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
AG N+I+VG L W + L F GK++E +++ +R++GR RGFGF+TY+ +
Sbjct: 202 AGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEV 261
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
+DAI + G + R + VN A+
Sbjct: 262 NDAIAALDGTDMDGRPLRVNIAE 284
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVG L +N+ +QL F+ G++++ I+ +R++G RGFGF+T + +
Sbjct: 113 TKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVE 172
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ R+++VNKA P+
Sbjct: 173 LFNRHSLEGRLLTVNKAAPR 192
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 47/67 (70%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K+ ++F+GGL+W TE +L++ F ++G +++ +IM + +SGR RGFGF+++ ++D
Sbjct: 225 SKESCKLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVD 284
Query: 63 DAIREMH 69
+ ++ H
Sbjct: 285 EVVKSQH 291
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+GR RGFGFITY A+D +
Sbjct: 314 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSGEAVDRVCQN 373
Query: 68 MHGREFGDRVISVNKAQPK 86
+ +F D+ I + +A P+
Sbjct: 374 KY-IQFKDKQIEIKRAAPR 391
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ ++ L + F+ FG + E ++ +RD+GR RGFGF+ YA D A++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 68 MHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 63 MNNEEFDGRRIRVDKA 78
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L+++V + LE AF FG I+ ++M+ERD+GR +GFGF+ AI
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 68 MHGREFGDRVISVNKAQP 85
M+G R ++VN+A+P
Sbjct: 64 MNGHSLQGRALTVNEARP 81
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L+++V + LE AF FG I+ ++M+ERD+GR +GFGF+ AI
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 68 MHGREFGDRVISVNKAQP 85
M+G R ++VN+A+P
Sbjct: 64 MNGHSLQGRALTVNEARP 81
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like
[Ornithorhynchus anatinus]
Length = 270
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ +
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 63 DAIREMHGREFGDRVISVNKA 83
DA+ M+G+ R I V++A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MAGMNGKTVDGRQIRVDQA 82
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+S + TE+ E F +FG++++ +M+++D+GRPRGFGF+T+ + A++ R
Sbjct: 187 KIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAVE---RT 243
Query: 68 MHG-REFGDRVISVNKAQPK 86
+ G + I V +AQP+
Sbjct: 244 LEGPLAILGKPIEVKRAQPR 263
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
K++ ++F+GGL+W T++ L++ F +FG++IEC +M + +GR RGFGF+T+ D + ++
Sbjct: 99 KEDGKMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNT 158
Query: 64 AIREMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
+ + H ++I +A P+ E + + GG
Sbjct: 159 VMVKEHS--LDGKLIDPKRAIPRDEQERTAKIFVGG 192
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+S++ + L +F R+G++I+ +++++R++GR RGFGFIT+A AI+
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQG 100
Query: 68 MHGREFGDRVISVNKAQPK 86
M G++ R I VN A +
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A + +IFVGGLSW TE L+ F ++G++ +C IM + + RPRGFGF+T+ D+ ++
Sbjct: 7 ASIEPGKIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASV 66
Query: 62 DDAIR 66
++ ++
Sbjct: 67 EEVMK 71
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVGG++ TE + + F +FG + E + ++ + R RGFGF+ + D + D +
Sbjct: 106 KKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGF-DSEDVVDRLC 164
Query: 67 EMHGREFGDRVISVNKAQPKM 87
++H + + + V KA+P+
Sbjct: 165 QIHFHQINGKTVEVKKAEPRF 185
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S TE+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ +
Sbjct: 83 SKIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLE 142
Query: 67 EMHGREFGDRVISVNKAQPK 86
E + I V KAQP+
Sbjct: 143 --GPLEILGKPIEVKKAQPR 160
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T+ L+ F +FG+++EC +M + SGR RGFGF+T+ D R ++ + +
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQERTSKIFVGG 89
>gi|125575106|gb|EAZ16390.1| hypothetical protein OsJ_31855 [Oryza sativa Japonica Group]
Length = 463
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++F+GG+SW TE +L + F +G + + +M ++ +GRPRGFGF+ ++D ++D A
Sbjct: 4 DQGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ + H R + V +A
Sbjct: 64 LVDPH--TLDGRTVDVKRA 80
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL N+TE + F +G + + +M ++++ RPRG + RR +DA+
Sbjct: 129 KIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRG---SVHHLRR--EDAVDR 183
Query: 68 MHGREFGD---RVISVNKAQPK 86
+ + F D +++ V +A P+
Sbjct: 184 VLHKTFHDLSGKMVEVKRALPR 205
>gi|427417658|ref|ZP_18907841.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760371|gb|EKV01224.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS++VT +E F +G++ + ++R+SGRPRGF F+ A + AI +
Sbjct: 3 IYVGNLSYDVTREDIEEVFKEYGRVNRVSLPMDRESGRPRGFAFVEMAAKEDEAKAIEAL 62
Query: 69 HGREFGDRVISVNKAQPKMGG 89
G E+ DRV+ VN+A+P+
Sbjct: 63 DGAEWMDRVMRVNEAKPRTAS 83
>gi|365088445|ref|ZP_09327889.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363417101|gb|EHL24188.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 111
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++I+VG L ++VT+ L++ F FG + ++M++R++GR +GFGF+ A+ AI
Sbjct: 3 SKIYVGNLPYSVTDASLQSNFSEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAIS 62
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGR 106
+HG R I VN A+P+ E SD GGY++ R
Sbjct: 63 GLHGMSVDGRTIVVNLARPR--EERSD----AGGYTASKR 96
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++++VG LSWN T+ L F +G + +C +M +R++GR RGFGF+TY + + AI
Sbjct: 4 SKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIA 63
Query: 67 EMHGREFGDRVISVNKAQPK 86
M+ +E R + VN A +
Sbjct: 64 AMNEQELDGRRVRVNMANSR 83
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
AG N+I+VG L W + L F GK++E +++ +R++GR RGFGF+TY+ +
Sbjct: 202 AGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEV 261
Query: 62 DDAIREMHGREFGDRVISVNKAQ 84
+DAI + G + R + VN A+
Sbjct: 262 NDAIAALDGTDMDGRPLRVNIAE 284
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVG L +N+ +QL F+ G++++ I+ +R++G RGFGF+T + +
Sbjct: 113 TKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVE 172
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ R+++VNKA P+
Sbjct: 173 LFNRHSLEGRLLTVNKAAPR 192
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG++ C + LERD+GR RGF F+ AD AI +
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++I+VG L ++VT+ LE+ F FG + ++M++R++GR +GFGF+ A AI
Sbjct: 3 SKIYVGNLPYSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAIT 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
+HG R I VN A+P+
Sbjct: 63 GLHGMSVDGRSIVVNLARPR 82
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F +FG++ C + LERD+GR RGF FI AD + AI +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG++ C + LERD+GR RGF F+ AD AI +
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|345569077|gb|EGX51946.1| hypothetical protein AOL_s00043g680 [Arthrobotrys oligospora ATCC
24927]
Length = 150
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGL+W+ ++ L F+ FG++ E ++ +RD+GR RGFGF+ + + A+
Sbjct: 2 SKLFVGGLAWHTDDQTLRTKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTNEADATTAMN 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNTEFDGRYIRVDKA 78
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKSIKVEQAT 85
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 53/80 (66%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
++ IFVG LSWNV + QL + F G+++ ++ ++R++G+ RGFG + +AD ++
Sbjct: 340 EESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADASSVQK 399
Query: 64 AIREMHGREFGDRVISVNKA 83
AI M+G+E R ++V++A
Sbjct: 400 AIDTMNGKEIDGRPVNVDRA 419
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG LSW+ TE + AF G++ ++ +R+SGRP+GFG++ + D A A +
Sbjct: 446 LFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAFEAL 505
Query: 69 HGREFGDRVISVNKAQPK 86
G E G R I ++ +QP+
Sbjct: 506 SGTEIGGRSIRLDYSQPR 523
>gi|375012528|ref|YP_004989516.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
gi|359348452|gb|AEV32871.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
Length = 111
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L W E L AF+ +G++ +I+ ++ +GR +GFGF+ D A AI E+
Sbjct: 3 IFVGSLPWATEEEDLRGAFEAYGEVDSVRIITDKFTGRSKGFGFVEMPDDDAAQKAIDEL 62
Query: 69 HGREFGDRVISVNKAQPK 86
+G +FG R I VNK++PK
Sbjct: 63 NGSQFGGRDIVVNKSEPK 80
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY---ADRRAMDD 63
++IFVGG+S T+ + F +FG++++ +M+++D+GRPRGFGF+T+ A A
Sbjct: 83 SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLS 142
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
A E+HG+ I V KAQP+
Sbjct: 143 ANLEIHGKP-----IEVKKAQPR 160
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 89
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 182
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++++VG LSWN T+ L F +G + +C +M +R++GR RGFGF+TY + + AI
Sbjct: 4 SKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIA 63
Query: 67 EMHGREFGDRVISVNKAQPK 86
M+ +E R + VN A +
Sbjct: 64 AMNEQELDGRRVRVNMANSR 83
>gi|167752759|ref|ZP_02424886.1| hypothetical protein ALIPUT_01020 [Alistipes putredinis DSM 17216]
gi|167659828|gb|EDS03958.1| hypothetical protein ALIPUT_01020 [Alistipes putredinis DSM 17216]
Length = 102
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+V L++ L+ F +G++ I+ +R++GR RGFGF+ D A +AI +
Sbjct: 3 IYVSNLNFRTRGESLQTLFGEYGEVSSANIITDRETGRSRGFGFVEMPDESAARNAINAL 62
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADR 113
+G E +R I+VN+A+PK E SD GGY S GSYG +R
Sbjct: 63 NGFELDERAINVNEARPKT--ERSDR----GGYGSNQGGSYGRNR 101
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ ++ L F+ FG++ E ++ +RD+GR RGFGF+ YA D A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNEEFDGRRIRVDKA 78
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ VTE + + F ++G++IE QIM + + R RGFGFIT+ +A+DD + +
Sbjct: 2016 KIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAK 2075
Query: 68 MHGREFGDRVISVNKAQPK 86
+ E + + KA+PK
Sbjct: 2076 GNKLELAGGQVEIKKAEPK 2094
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ T Q F ++G+I + IM +R +G+PRGFGF+TYAD +D I++
Sbjct: 1928 KIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQD 1987
Query: 68 MH 69
H
Sbjct: 1988 SH 1989
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ ++ L F+ FG++ E ++ +RD+GR RGFGF+ YA D A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNEEFDGRRIRVDKA 78
>gi|4544401|gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E R FVGGL+W E+ +E F+ FG++ + +I+++R++GR +GF F+T+ D +M A
Sbjct: 42 NEYRCFVGGLAWATDEQSIERCFNEFGEVFDSKIIIDRETGRSKGFRFVTFKDEDSMRTA 101
Query: 65 IREMHGREFGDRVIS 79
I M+G+E R I+
Sbjct: 102 IDRMNGQELDGRNIT 116
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++F+GG+SW TE +L + F +G + + +M ++ +GRPRGFGF+ ++D ++D A
Sbjct: 4 DQGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ + H R + V +A
Sbjct: 64 LVDPH--TLDGRTVDVKRA 80
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL N+TE + F +G + + +M ++++ RPRGFGFIT+ A+D + +
Sbjct: 129 KIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFDAEDAVDRVLHK 188
Query: 68 MHGREFGDRVISVNKAQPK 86
+ +++ V +A P+
Sbjct: 189 TF-HDLSGKMVEVKRALPR 206
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+I+VG LSWN T+ L AF ++G +++ +M +R++GR RGFGF+TY+ +AI
Sbjct: 4 KIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISG 63
Query: 68 MHGREFGDRVISVNKAQPK 86
++ R I VN A +
Sbjct: 64 LNETSLDGRQIKVNLANAR 82
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVG L+W L++AF +FG +I+ +M +R++GR RGFGFIT+ + AI
Sbjct: 9 KLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEA 68
Query: 68 MHGREFGDRVISVNKAQPK 86
++G+E R I VN A +
Sbjct: 69 LNGQELDGREIRVNYANSQ 87
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++ +GGLS TE LE F ++G I+E ++ +R++ + RGF FIT+ DA +E
Sbjct: 8 KLLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKE 67
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 68 MNGKFLDGKTIKVEQAN 84
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. WH 8102]
Length = 214
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F +FG++ C + LERD+GR RGF F+ AD D AI +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVANCALPLERDTGRKRGFAFVEMADEAVEDAAIEGL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+++F+GGLS+ V ++ L++AF FG +++ +++ +RDSGR RGFGF+ +++ + A+
Sbjct: 35 SSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSAL 94
Query: 66 REMHGREFGDRVISVNKAQPK 86
M G++ R I V+ A K
Sbjct: 95 SAMDGKDLNGRSIRVSYANDK 115
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 161
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++++VG LSWN T+ L F +G + +C +M +R++GR RGFGF+TY + + AI
Sbjct: 4 SKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIA 63
Query: 67 EMHGREFGDRVISVNKAQPK 86
M+ +E R + VN A +
Sbjct: 64 AMNEQELDGRRVRVNMANSR 83
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F++FG++ E ++ +RD+ R RGFGF+ ++ D A+
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMDA 62
Query: 68 MHGREFGDRVISVNKAQPK 86
M+ +EF R I V+KA +
Sbjct: 63 MNNQEFDGRTIRVDKASER 81
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGG+S + TE+ + F +FG++++ +M+++D+GRPRGFGF+T+ A++ +
Sbjct: 83 SKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLS 142
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ E + I V KAQP+
Sbjct: 143 Q--PLEILGKPIEVKKAQPR 160
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L++ F +FG++ EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQERTSKIFVGG 89
>gi|223940412|ref|ZP_03632265.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223890907|gb|EEF57415.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 118
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++FVG L ++ TE L++ F G +I IM +R +GR RGF FI + D A+
Sbjct: 3 TKLFVGNLPFSTTENDLQDHFSGAGTVIAVNIMQDRATGRSRGFAFIEMGSQAEADAAVA 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
+ HG+EF R ++VN+A+P+
Sbjct: 63 QYHGKEFQGRALTVNEARPR 82
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY---ADRRAMDD 63
++IFVGG+S T+ + F +FG++++ +M+++D+GRPRGFGF+T+ A A
Sbjct: 98 SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLS 157
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
A E+HG+ I V KAQP+
Sbjct: 158 ANLEIHGKP-----IEVKKAQPR 175
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W T++ L + F FG+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 15 KMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK 74
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 75 EH--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 104
>gi|392412892|ref|YP_006449499.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390626028|gb|AFM27235.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 109
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ +E QL+ F+ FG++ I+ ++ +GRPRGFGF+ +R AI+E+
Sbjct: 6 IYVGNLSFQTSEDQLKELFESFGQVESATIISDKTTGRPRGFGFVKMPEREEGLKAIQEL 65
Query: 69 HGREFGDRVISVNKAQPK 86
R+F R + VN+A+PK
Sbjct: 66 DARDFMGRNLKVNEARPK 83
>gi|343427629|emb|CBQ71155.1| related to glycine-rich RNA-binding protein [Sporisorium
reilianum SRZ2]
Length = 192
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L +AF +G++ + +M +R++GR RGFGF+T+A + D AI
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAA 63
Query: 68 MHGREFGDRVISVNKAQPK 86
+H +E R I VN A +
Sbjct: 64 LHDQELDGRRIRVNMANSR 82
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + L+ +F +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSVVVNEARP 81
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L+++V + LE AF FG I+ ++M+ERD+GR +GFGF+ A+
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAVEA 63
Query: 68 MHGREFGDRVISVNKAQP 85
M+G R ++VN+A+P
Sbjct: 64 MNGHSLQGRALTVNEARP 81
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+++FVGGLS+ + L++ F +G ++E +I+++RD+G+ +G+GFITY A+
Sbjct: 30 SSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAV 89
Query: 66 REMHGREFGDRVISVNKAQ 84
M G++ R++ V+ A
Sbjct: 90 TAMDGKDLQGRIVRVSTAN 108
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++V + L+ +F +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQPLGGRSVVVNEARP 81
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL NVTE L + F RFGK++E IM +++ + RGFGF+++ D A+D + E
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 68 MHGREFGDRVISVNKAQPK 86
H + + + +A+P+
Sbjct: 164 -HFVNLNGKQVEIKRAEPR 181
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 40/53 (75%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
++ ++FVGGLSW T+ L+ F R+G++I+C +M +SGR RGFGF+T++D
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSD 63
>gi|332255488|ref|XP_003276864.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Nomascus
leucogenys]
Length = 157
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ VTE + +N F ++GK++E QI+ + ++ R RGFGFI + +D+ I +
Sbjct: 108 KIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISK 167
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 168 GNMIDMAGTQVEIKKAEPK 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ + T F ++G I + IM +R +G+PRGFGFITYAD +D I +
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
H + + + + PK G+ D
Sbjct: 80 TH--VINGKQVEIKRTIPKGSGQSKD 103
>gi|33862287|ref|NP_893847.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9313]
gi|33640400|emb|CAE20189.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9313]
Length = 199
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG++ C + LERD+GR RGF F+ AD A AI +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAEMMGRPLRINKAEPR 80
>gi|124021728|ref|YP_001016035.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962014|gb|ABM76770.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9303]
Length = 202
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG++ C + LERD+GR RGF F+ AD A AI +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAEMMGRPLRINKAEPR 80
>gi|410255528|gb|JAA15731.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ +
Sbjct: 2 ASEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 63 DAIREMHGREFGDRVISVNKA 83
A+R M+G R I V+ A
Sbjct: 62 VAMRAMNGESLDGRQIRVDHA 82
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSW++ + L+N FD G ++ +++ ER + R RG+G++ + D+ + A++EM
Sbjct: 189 IFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAEKAVKEM 248
Query: 69 HGREFGDRVISVNKAQPKMGGEVSD 93
HG+E R I+ + + K G D
Sbjct: 249 HGKEIDGRPINCDLSTSKPAGNPRD 273
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY---ADRRAMDD 63
++IFVGG+S T+ + F +FG++++ +M+++D+GRPRGFGF+T+ A A
Sbjct: 83 SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLS 142
Query: 64 AIREMHGREFGDRVISVNKAQPK 86
A E+HG+ I V KAQP+
Sbjct: 143 ANLEIHGKP-----IEVKKAQPR 160
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 89
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI- 65
++IFVGG+S T+ + F +FG++++ +M+++D+GRPRGFGF+T+ ++ +
Sbjct: 83 SKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLA 142
Query: 66 --REMHGREFGDRVISVNKAQPK 86
E+HG+ I V KAQP+
Sbjct: 143 ANLEIHGKP-----IEVKKAQPR 160
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T++ L + F +FG+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ E + + GG
Sbjct: 61 H--YLDGKIIDPKRAIPRDEQEKTSKIFVGG 89
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 134
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ T+ L F++FG I E ++ +RD+ R RGFGF+ +A D AI
Sbjct: 3 KLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAIDG 62
Query: 68 MHGREFGDRVISVNKA 83
M+ +EF RVI V++A
Sbjct: 63 MNNQEFDGRVIRVDRA 78
>gi|5803137|ref|NP_006734.1| putative RNA-binding protein 3 [Homo sapiens]
gi|383872909|ref|NP_001244635.1| RNA binding motif (RNP1, RRM) protein 3 [Macaca mulatta]
gi|332860686|ref|XP_521047.2| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
troglodytes]
gi|332860688|ref|XP_003317502.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
troglodytes]
gi|397471359|ref|XP_003807263.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
paniscus]
gi|397471361|ref|XP_003807264.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
paniscus]
gi|402910082|ref|XP_003917720.1| PREDICTED: putative RNA-binding protein 3 [Papio anubis]
gi|426395802|ref|XP_004064149.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|426395804|ref|XP_004064150.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Gorilla
gorilla gorilla]
gi|1710620|sp|P98179.1|RBM3_HUMAN RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3; AltName: Full=RNPL
gi|881954|gb|AAB17212.1| RNPL [Homo sapiens]
gi|13905080|gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
gi|119571152|gb|EAW50767.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|119571153|gb|EAW50768.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|380815298|gb|AFE79523.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815300|gb|AFE79524.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815302|gb|AFE79525.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420491|gb|AFH33459.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420493|gb|AFH33460.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948600|gb|AFI37905.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948602|gb|AFI37906.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|410228038|gb|JAA11238.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVEQAT 85
>gi|388499174|gb|AFK37653.1| unknown [Lotus japonicus]
Length = 302
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
ENR+ VG L+W V LE+ F G++++ +++ +R+SGR RGFGF+T++ ++ AI
Sbjct: 217 ENRVHVGNLAWGVDNAALESLFREQGRVVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAI 276
Query: 66 REMHGREFGDRVISVNKAQPK 86
R + G + R I V++A K
Sbjct: 277 RSLDGADLNGRAIKVSQADSK 297
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
++++FVG L ++V QL F G + +++ ++ +G RGF F+T + + A
Sbjct: 86 DHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKTTGNSRGFAFVTMSSAAEAEVAA 145
Query: 66 REMHGREFGDRVISVNKAQPKMG---GEVSDHGYRGGGYSSGGRGSY 109
++ + E R + VN P G + +R ++ GG SY
Sbjct: 146 QQFNNYELEGRALRVNSGPPPKNENRGFNENPRFRNNSFNRGGSDSY 192
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + V + L+ AF FG + ++M+ER++GR +GFGF+ AI+
Sbjct: 3 NKLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G+ G R + VN+A+P
Sbjct: 63 GMNGQSLGGRSLVVNEARP 81
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum
CS3096]
Length = 112
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++++G LSWN T+ L NA FG II+ +M +RD+GR RGFGF+T+ ++A+
Sbjct: 4 KLYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAVNG 63
Query: 68 MHGREFGDRVISVNKAQP 85
++ +E R I VN A
Sbjct: 64 LNEQELDGRRIKVNMANA 81
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
E +IF+GGL+W TE L+ F ++G + + +M + +G PRGFGF+ + + + D A+
Sbjct: 60 EGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAAL 119
Query: 66 REMHGREFGDRVISVNKAQPK 86
+E H R I V +A P+
Sbjct: 120 KEEH--VIDGRTIDVKRAVPR 138
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY----ADRRAMD 62
N+IFVGGL V + F +FGK+ + +M ++ +GR RGFGFITY R+ M
Sbjct: 175 NKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMS 234
Query: 63 DAIREMHGREFGDRVISVNKAQPKMG 88
E+ G+ + V A P+ G
Sbjct: 235 GGTHELKGKS-----VEVKTAAPRDG 255
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ VTE + +N F ++GK++E QI+ + ++ R RGFGFI + +D+ I +
Sbjct: 108 KIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISK 167
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 168 GNMIDMAGTQVEIKKAEPK 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ + T F ++G I + IM +R +G+PRGFGFITYAD +D I +
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
H + + + + PK G+ D
Sbjct: 80 TH--VINGKQVEIKRTIPKGSGQSKD 103
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++FVGG+SW E +L F +G++ + +M ++ +GRPRGFGF+ ++D +D
Sbjct: 4 DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVS 92
++E H R + V +A + +VS
Sbjct: 64 LQEKH--SIDTREVDVKRAMSREEQQVS 89
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +T+ + F+ +G + + IM ++ + RPRGFGF+++ A+D + +
Sbjct: 111 KIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK 170
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + V +A PK
Sbjct: 171 TF-HDLSGKQVEVKRALPK 188
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ +G + E ++ +RD+GR RGFGF+ Y + AI
Sbjct: 57 SKLFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAIT 116
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 117 AMNNVEFDGRTIRVDKA 133
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL NVTE L + F RFGK++E IM +++ + RGFGF+++ D A+D + E
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 68 MHGREFGDRVISVNKAQPK 86
H + + + +A+P+
Sbjct: 164 -HFVNLNGKQVEIKRAEPR 181
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
++ ++FVGGLSW T+ L+ F R+G++I+C +M +SGR RGFGF+T++D +
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLV 70
Query: 65 IR 66
++
Sbjct: 71 LQ 72
>gi|148684912|gb|EDL16859.1| mCG120440 [Mus musculus]
Length = 366
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE AF ++G+IIE +M +R++ + RGF F+T+ + A R+
Sbjct: 40 KLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARD 99
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 100 MNGKSLDGKAIKVAQAT 116
>gi|355757333|gb|EHH60858.1| RNA-binding motif protein 3 [Macaca fascicularis]
Length = 157
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M +F+GGL+ E+ LE+ F ++G I++ +M ++++ + RGF F+T+ A
Sbjct: 1 MEAHCPGTLFIGGLNVGTNEKDLESVFGKYGHIVKVLLMKDQETNKSRGFAFVTFESPAA 60
Query: 61 MDDAIREMHGREFGDRVISVNKAQ 84
DA R+M+G+ + I V +A
Sbjct: 61 AKDAARDMNGKALDGKSIKVEQAN 84
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGLS++ + L AF ++G++IE +++++R++GR RGFGF+T+ AI+
Sbjct: 40 SKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQ 99
Query: 67 EMHGREFGDRVISVNKA 83
+ G++ R + VN A
Sbjct: 100 ALDGQDLHGRRVRVNYA 116
>gi|403290994|ref|XP_003936587.1| PREDICTED: putative RNA-binding protein 3-like [Saimiri boliviensis
boliviensis]
Length = 159
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 13/139 (9%)
Query: 4 KDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDD 63
+E ++FV GL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ +
Sbjct: 3 SEEGKLFVAGLNFNNDEQPLEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASV 62
Query: 64 AIREMHGREFGDRVISVNKAQPKM----GGEVSDHGY-----RGGGYSSGGRGSYGADRP 114
A++ M+G I V+ A GG HG RG G G G Y RP
Sbjct: 63 AMKAMNGESLDGGQIHVDHAGKSARGTRGGAFVAHGCGRSYSRGVGDQGYGSGRYYDSRP 122
Query: 115 GGQDDCFKCGRPGHWARDC 133
GG + CGR +RDC
Sbjct: 123 GGYG--YGCGRSS--SRDC 137
>gi|171680237|ref|XP_001905064.1| hypothetical protein [Podospora anserina S mat+]
gi|170939745|emb|CAP64971.1| unnamed protein product [Podospora anserina S mat+]
Length = 176
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y + AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNPDDAQKAIS 61
Query: 67 EMHGREFGDRVISVNKA 83
M EF R I V+KA
Sbjct: 62 AMKNIEFDGRQIRVDKA 78
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 50/77 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GG+S+ ++ L+ AF +G++IE +++++R +GR RGFGF+TY AI
Sbjct: 32 KLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITG 91
Query: 68 MHGREFGDRVISVNKAQ 84
M G++ R++ V+ A
Sbjct: 92 MDGKDLQGRIVRVSYAH 108
>gi|15221825|ref|NP_173298.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
gi|9795594|gb|AAF98412.1|AC026238_4 Similar to glycine-rich RNA-binding proteins [Arabidopsis thaliana]
gi|29029110|gb|AAO64934.1| At1g18630 [Arabidopsis thaliana]
gi|110743184|dbj|BAE99483.1| hypothetical protein [Arabidopsis thaliana]
gi|332191616|gb|AEE29737.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
Length = 155
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGGLS + L+ AF FGKI++ ++L+R+SG RGFGF+TY ++A++
Sbjct: 36 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 95
Query: 67 EMHGREFGDRVISVNKA 83
M +E R+I V+ A
Sbjct: 96 AMQNKELDGRIIGVHPA 112
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IF+GG+S+ + L+ AFD++G ++E I+++RD+GR RGFGF+TY AI+
Sbjct: 40 SKIFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQ 99
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G++ R + VN A +
Sbjct: 100 AMDGQDLHGRRVRVNYATER 119
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila
ATCC 42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila
ATCC 42464]
Length = 153
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG++ E ++ +RD+GR RGFGF+ Y + AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAIT 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNVEFDGRQIRVDKA 78
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F +G+I E +++ +RD+ RGFGFIT+ + DA
Sbjct: 3 DEGKLFVGGLSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDA 62
Query: 65 IREMHGREFGDRVISVNKAQPK 86
+ M+G+ R I V++A+ K
Sbjct: 63 LLAMNGKSIDGRQIRVDQAEKK 84
>gi|21553495|gb|AAM62588.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
Length = 152
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++IFVGGLS + L+ AF FGKI++ ++L+R+SG RGFGF+TY ++A++
Sbjct: 33 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 92
Query: 67 EMHGREFGDRVISVNKA 83
M +E R+I V+ A
Sbjct: 93 AMQNKELDGRIIGVHPA 109
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++FVGGLSW + L+ AF FG++ E +++ +R++GR RGFGF+ +++ A
Sbjct: 37 NKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAAS 96
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G+E R + VN A +
Sbjct: 97 SMDGQELDGRSVRVNFANER 116
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
++++VG LSWN T+ L F FG++ + IM +RD+GR RGFGF+T++ A+
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 67 EMHGREFGDRVISVNKAQPK 86
++ +E R I VN A +
Sbjct: 62 ALNEQELDGRRIRVNVANAR 81
>gi|353241965|emb|CCA73743.1| probable heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 343
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGGL+ +VT L+ F +FGK+I+ +M++RDS R +GFGF+T+ D+ + +
Sbjct: 83 KMFVGGLAPSVTNEGLKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTFDDQSGAER-LFG 141
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSS 103
M G + I V AQP+ G SD GGYS+
Sbjct: 142 MPGLAIDGKTIEVKMAQPRAGLN-SDRSQNRGGYSN 176
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERD-SGRPRGFGFITYADRRAMDDAIRE 67
+FVGGL+W+ T+ L N F +FG++ C IM RD +GR RGF F+T+ D A++ + +
Sbjct: 1 MFVGGLNWDTTDDGLRNYFSQFGRVEACTIM--RDPAGRSRGFAFLTFEDPAAVNKVMVQ 58
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
H ++I +A P+ + + + GG
Sbjct: 59 EH--YLDGKIIDPKRAIPRTEHQRTVKMFVGG 88
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGG+S+ + L AF ++G++IE +++++R++GR RGF F+TY AI+
Sbjct: 40 SKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQ 99
Query: 67 EMHGREFGDRVISVNKAQ 84
+ G++ R + VN A
Sbjct: 100 ALDGQDLHGRRVRVNYAN 117
>gi|317968520|ref|ZP_07969910.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0205]
Length = 157
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG++ C + LERD+GR RGF F+ D + D AI +
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVANCSLPLERDTGRKRGFAFVELVDPESEDRAIDAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|226088567|dbj|BAH37028.1| RNA binding motif protein [Tokudaia osimensis]
Length = 279
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 10 FVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMH 69
F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ DA R+M+
Sbjct: 1 FIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMN 60
Query: 70 GREFGDRVISVNKAQ 84
G+ + I V +A
Sbjct: 61 GKSLDGKAIKVEQAT 75
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG LSWNV E L F+ FG++ +IM ER++GR RGFG++ YAD + A
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 69 HGREFGDRVISVNKAQPK 86
E R I+++ A+P+
Sbjct: 287 KDTELDGRTINLDYAKPR 304
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+ N +FVG L + V E + F+ G+I ++ + ++GRP+G+G++ ++ A
Sbjct: 329 ESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDEARQA 388
Query: 65 IREMHGREFGDRVISVNKAQPKMGGE 90
+ E+ G + G R I ++ + P+ GE
Sbjct: 389 LNELQGTDIGGRAIRLDFSTPRPQGE 414
>gi|358059659|dbj|GAA94591.1| hypothetical protein E5Q_01243 [Mixia osmundae IAM 14324]
Length = 294
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 48/213 (22%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY-ADRRAMDDAI 65
N+I++GGL + T L++ F + G +I ++ G+GF+ + ++ A+D
Sbjct: 24 NKIYIGGLPESTTTEDLQDCFGQIGPVITVELKS--------GYGFVEFGTEQHALDAVS 75
Query: 66 REMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGR 125
+ G G ++ +P+ + + G CFKCG
Sbjct: 76 KYNDGHFLGAQIKVEVSKRPRFRQQENGLG------------------------CFKCGE 111
Query: 126 PGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLG-GGRDRYIDDR-YDGGRYGDR 183
HWAR+CP+ G+ R G G Y+ R+ DDR Y G RY DR
Sbjct: 112 TSHWARECPNVRNGK-------LIRPPERGYGPPRRYMSPSPPPRHRDDRGYRGSRYDDR 164
Query: 184 DRYDSKDSKYGSRDRYVS------DRYPPAGDR 210
D Y+ + +Y R+R S DR PP+G R
Sbjct: 165 DDYNREPPRYRDRERDRSPADGYRDRSPPSGPR 197
>gi|343427628|emb|CBQ71156.1| related to glycine-rich RNA-binding protein [Sporisorium
reilianum SRZ2]
Length = 175
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN T+ L +AF +G++ + +M +R++GR RGFGF+T+A + D AI
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAA 63
Query: 68 MHGREFGDRVISVNKAQPK 86
+H +E R I VN A +
Sbjct: 64 LHDQELDGRRIRVNMANSR 82
>gi|452002034|gb|EMD94493.1| hypothetical protein COCHEDRAFT_1131167 [Cochliobolus
heterostrophus C5]
Length = 125
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+W+ ++ L + F+ FG + E ++ +RD+GR RGFGF+ YA D A++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 68 MHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 63 MNNEEFDGRRIRVDKA 78
>gi|325302660|tpg|DAA34468.1| TPA_exp: RNA-binding protein LARK [Amblyomma variegatum]
Length = 212
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 50/190 (26%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L LE F ++GK+ EC I+ + + F+ + AI
Sbjct: 2 KLYVGSLPEGCDAASLEALFAKYGKVEECDIV--------KNYAFVHMSSEDESKMAIDA 53
Query: 68 MHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKC 123
+H EF I+V +K +PK G GGRG C++C
Sbjct: 54 LHNSEFMGGKITVEASHSKVRPKPG--------------MGGRGQ-----------CYRC 88
Query: 124 GRPGHWARDCPSAVGGRGGAGGSF-------SSRSRFGGVGVRGDYLG---GGRDRYIDD 173
GR GHW+++CP R GA +R+ GVG D LG GG DR++D
Sbjct: 89 GRQGHWSKECPRNPNARFGAAVPMLPPGGGGGPLARYPGVGGGPDRLGYGSGGPDRFLD- 147
Query: 174 RYDGGRYGDR 183
GG YGDR
Sbjct: 148 --RGGAYGDR 155
>gi|320103893|ref|YP_004179484.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
gi|319751175|gb|ADV62935.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
Length = 104
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L ++ TE QL + F +G+++ QIM++R++ R RGFGFI R +AI
Sbjct: 2 KLYVGNLPYDTTEDQLIDVFSEYGEVVSAQIMIDRETNRSRGFGFIEM--RTGAQEAIEA 59
Query: 68 MHGREFGDRVISVNKAQPK 86
++G++F R ++VN+A+P+
Sbjct: 60 LNGQDFHGRSLTVNEARPR 78
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2;
Short=xCIRP2; AltName: Full=Glycine-rich RNA-binding
protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGL+++ E LE F ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 MMAMNGKAVDGRQIRVDQA 81
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGG+++ E+ LE F ++G + E ++ ERD+ R +GFGF+T+ + DA
Sbjct: 3 DEGKLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDA 62
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVSDH--GYRGGGYS-SGGRGSYGADRPGG 116
+ M+G+ R I V+ A G + G G YS GGR S G R GG
Sbjct: 63 LAGMNGKTVDGRQIRVDHAGKSSGNRSRSYQSGQSYGNYSFRGGRSSRGFSRDGG 117
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ + L F+ FG++ E ++ +RD+GR RGFGF+ + + AI+
Sbjct: 2 SKLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQ 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 53/79 (67%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+S++ + L +F R+G++I+ +++++R++GR RGFGF+T+A AI+
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 68 MHGREFGDRVISVNKAQPK 86
M G++ R I VN A +
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGL+W T L F FG++ + +M +R++GR RGFGF+T++ + AI
Sbjct: 2 SKLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIE 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ +EF R I V++A
Sbjct: 62 AMNEQEFEGRQIRVSEA 78
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ ++ L F+ FG++ E ++ +RD+GR RGFGF+ YA+ D A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQ 61
Query: 67 EMHGREFGDRVISVNKA 83
++ EF R I V+KA
Sbjct: 62 ALNNEEFDGRRIRVDKA 78
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 53/79 (67%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+S++ + L +F R+G++I+ +++++R++GR RGFGF+T+A AI+
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 68 MHGREFGDRVISVNKAQPK 86
M G++ R I VN A +
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|333377706|ref|ZP_08469439.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
gi|332883726|gb|EGK04006.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
Length = 106
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 54/81 (66%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IF+ GLS+++ + L + F+ +G+I ++++++ +GR +G+GF+ D A AI E+
Sbjct: 3 IFIAGLSYSINDNDLRDLFNEYGEISSAKVIMDKATGRSKGYGFVELEDNAAGQKAIEEL 62
Query: 69 HGREFGDRVISVNKAQPKMGG 89
+G E+ R ISV++A+P+ G
Sbjct: 63 NGAEYDGRTISVSEARPRTEG 83
>gi|281205541|gb|EFA79731.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 271
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N + V G S + + +L++ F FGKI+EC +M++ ++ RGFGFIT+ D+AIR
Sbjct: 55 NSLHVAGFSLKLKDEELKDKFTSFGKILECVVMVDPNTKISRGFGFITFGSADEADEAIR 114
Query: 67 EMHGREFGDRVISVNKAQ 84
M G + VI V+K++
Sbjct: 115 IMDGSKIDGNVIKVSKSK 132
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+ V ++ L +F FG ++E +I+ +R++GR RGFGF+T+A + A+
Sbjct: 39 SKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAVE 98
Query: 67 EMHGREFGDRVISVNKAQPK 86
M G++ R I VN AQ +
Sbjct: 99 AMDGKDLQGRSIRVNIAQER 118
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSWNV L F G+++ ++ ++R++G+ RGFG++T+A A+D AI +
Sbjct: 46 IFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAIAQ- 104
Query: 69 HGREFGDRVISVNKAQPKMGGEV 91
+G+E R ++++K+ K G V
Sbjct: 105 NGKEIDGRAVNIDKSIEKDKGAV 127
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A + + +FVG LSW+ TE L F+ +G I ++ +R++G+P+GF ++ ++D A
Sbjct: 139 ASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEAS 198
Query: 62 DDAIREMHGREFGDRVISVNKAQPK 86
A G E R I V+ +QP+
Sbjct: 199 KKAFEGAAGAEVAGRNIRVDFSQPR 223
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
M+ + + +F+G L + R LE+ F+++G+I+ C + G + F+ + D R
Sbjct: 1 MSRRSQGSLFIGRLDKHTRTRDLEDRFEKYGRILRCDVKY----GAEMAYAFLDFEDHRD 56
Query: 61 MDDAIREMHGREFG--DRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD 118
+DA++E +GRE+ V+ K P+ + S Y D
Sbjct: 57 AEDALKEENGREYQGVSMVVEWAKGAPRRQ-QSSQQAY---------------------D 94
Query: 119 DCFKCGRPGHWARDC 133
+C+KC R GHWARDC
Sbjct: 95 ECYKCHRSGHWARDC 109
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG LSWN + L F FG +++ +M +R++GR RGFGF+T++ + D AI
Sbjct: 5 KVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIGG 64
Query: 68 MHGREFGDRVISVNKAQPKMGG 89
++ +E R I VN A + G
Sbjct: 65 LNEQELDGRRIRVNLANARPAG 86
>gi|427796859|gb|JAA63881.1| Putative glycine rich protein, partial [Rhipicephalus pulchellus]
Length = 266
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 47/187 (25%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L LE F ++GK+ EC I+ + + F+ AI
Sbjct: 33 KLYVGSLPEGCDVASLEALFAKYGKVEECDIV--------KNYAFVHMNSEEESKLAIDA 84
Query: 68 MHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKC 123
+H EF I+V +K +PK G GGRG C++C
Sbjct: 85 LHNSEFMGGKITVEASHSKVRPKPG--------------MGGRG-----------QCYRC 119
Query: 124 GRPGHWARDCPSAVGGRGGAGGSFS-----SRSRFGGVG--VRGDYLGGGRDRYIDDRYD 176
GR GHW+++CP R G+G +R+ GVG R Y GG DR++D
Sbjct: 120 GRQGHWSKECPRNPNARFGSGVPMMPPGGGPLARYPGVGGPERLGYGSGGPDRFMD---R 176
Query: 177 GGRYGDR 183
GG YGDR
Sbjct: 177 GGAYGDR 183
>gi|8927581|gb|AAF82129.1|AF279289_1 testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ A+R+
Sbjct: 3 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 62
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 63 MNGKSLDGKAIKVAQAT 79
>gi|327279534|ref|XP_003224511.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Anolis
carolinensis]
Length = 231
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%)
Query: 1 MAGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRA 60
+ +E ++FVGGL+++ E+ LE F FG I E ++ ++++ R RGFGFIT+A+
Sbjct: 79 IMSSEEGKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEH 138
Query: 61 MDDAIREMHGREFGDRVISVNKA 83
DA+R M+G R I V+ A
Sbjct: 139 ASDAMRAMNGESVDGRQIRVDHA 161
>gi|225447494|ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL+ F+++G+I + +M +R +GRPRGFGFITYAD +D+ I+E
Sbjct: 19 KIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQE 78
Query: 68 MH 69
H
Sbjct: 79 TH 80
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V+E + +N F ++GK++E +I+ + + R RGFGFI + + + +DD +
Sbjct: 107 KIFVGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTN 166
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 167 GNMIDMEGTQVEIKKAEPK 185
>gi|358391693|gb|EHK41097.1| hypothetical protein TRIATDRAFT_301780 [Trichoderma atroviride
IMI 206040]
Length = 171
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ + AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRFVQEADAQAAID 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|427777187|gb|JAA54045.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 219
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 47/187 (25%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L LE F ++GK+ EC I+ + + F+ AI
Sbjct: 3 KLYVGSLPEGCDVASLEALFAKYGKVEECDIV--------KNYAFVHMNSEEESKLAIDA 54
Query: 68 MHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKC 123
+H EF I+V +K +PK G GGRG C++C
Sbjct: 55 LHNSEFMGGKITVEASHSKVRPKPG--------------MGGRG-----------QCYRC 89
Query: 124 GRPGHWARDCPSAVGGRGGAGGSFS-----SRSRFGGVG--VRGDYLGGGRDRYIDDRYD 176
GR GHW+++CP R G+G +R+ GVG R Y GG DR++D
Sbjct: 90 GRQGHWSKECPRNPNARFGSGVPMMPPGGGPLARYPGVGGPERLGYGSGGPDRFMD---R 146
Query: 177 GGRYGDR 183
GG YGDR
Sbjct: 147 GGAYGDR 153
>gi|148684930|gb|EDL16877.1| mCG114434 [Mus musculus]
Length = 153
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R +GF FIT+ + DA
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS+ E L AF ++G I + ++ ++++GR RGFGF+ Y DA
Sbjct: 3 DEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 MTAMNGKSLDGRAIRVDEA 81
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS++VT L++AF ++G + + Q+ ++++GRPRGFGF+ + + AI +
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
+G E+ R + VNKA+P+
Sbjct: 63 NGAEWMGRQLKVNKARPR 80
>gi|261859212|dbj|BAI46128.1| RNA binding motif protein, X-linked-like 2 [synthetic construct]
Length = 392
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ A+R+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVAQAT 85
>gi|449486950|ref|XP_004157451.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 163
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 55/82 (67%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS+N + L AF ++G+++E +++++ D+GR +GFGF+T++ + AI+
Sbjct: 70 SKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIK 129
Query: 67 EMHGREFGDRVISVNKAQPKMG 88
+ G++ G R I N A K+
Sbjct: 130 ALDGKDLGGRRIRCNYAVEKVA 151
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSW++ + L+ F+ G +I ++M ER + R RG+G++ + D+ + AI+EM
Sbjct: 198 IFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGYGYVDFEDKSYAEKAIKEM 257
Query: 69 HGREFGDRVISVNKAQPKMGG 89
HG+E R I+ + + K G
Sbjct: 258 HGKEIDGRPINCDMSTSKPAG 278
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+G LS+ L F ++G+I+ +I ++ +P+GFG++ Y A +
Sbjct: 299 LFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDATKAFEGL 358
Query: 69 HGREFGDRVISVNKAQPKMG 88
G +R + ++ + PK
Sbjct: 359 QGEYINNRPVRLDYSIPKQN 378
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ VTE +L++ F ++G ++E Q++ + ++ R RGFGF+ + +D+ + +
Sbjct: 110 KIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSK 169
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + D + + KA+PK
Sbjct: 170 GNMIDMADTQVEIKKAEPK 188
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
G +IF+GGL + T F ++G+I + IM +R +G+PRGFGFIT+AD +D
Sbjct: 15 GASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVD 74
Query: 63 DAIREMHGREFGDRVISVNKAQPKMGG 89
I + H + + + + PK G
Sbjct: 75 KVIEDTH--VINGKQVEIKRTIPKGAG 99
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL NVTE L F+R+GK++E IM +++ + RGFGF+++ D A+D + E
Sbjct: 104 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 68 MHGREFGDRVISVNKAQPK 86
H + + + +A+P+
Sbjct: 164 -HFVNLNGKQVEIKRAEPR 181
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
++ ++FVGGLSW T+ L+ F R+G++I+C +M +SGR RGFGF+T++D +
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLV 70
Query: 65 IR 66
++
Sbjct: 71 LQ 72
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGL ++ E LE AF ++G I + ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R+I V++A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
NR++VG LS++ T LE+AF G++ E + +R++G+PRGF F+T +A + AI
Sbjct: 3 NRLYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGSAQAANSAIS 62
Query: 67 EMHGREFGDRVISVNKAQ 84
+++G R + VN+AQ
Sbjct: 63 QLNGAVLDGRALKVNEAQ 80
>gi|392597031|gb|EIW86353.1| hypothetical protein CONPUDRAFT_133797 [Coniophora puteana
RWD-64-598 SS2]
Length = 453
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 28/129 (21%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VGGL + L+N F + G I+ ++ GFGF+ + R A ++++
Sbjct: 84 NKVYVGGLPEHTQTEDLQNCFGKLGSIVAIELKT--------GFGFVEFDSREAAEESVA 135
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRP 126
+ + F I V + + G ++ H SS CFKCG+P
Sbjct: 136 KYNEGYFMGNKIRVELSHSR--GRITKH------VSSDPSA------------CFKCGQP 175
Query: 127 GHWARDCPS 135
GHWAR+CP+
Sbjct: 176 GHWARECPN 184
>gi|168700972|ref|ZP_02733249.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 117
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
++VG +S++ TE +L F ++G + + QI+++R++GRPRGF F+ +D + AI+ +
Sbjct: 3 LYVGNMSFSTTEDELRELFSQYGTVTKAQIVMDRETGRPRGFAFVEMSD--GGEQAIQAL 60
Query: 69 HGREFGDRVISVNKAQPK 86
+G + G R ++VN+A+P+
Sbjct: 61 NGTQVGGRSLTVNEAKPR 78
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS+ E L AF ++G I + ++ ++++GR RGFGF+ Y + DA
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 LEGMNGKTLDGRAIRVDEA 81
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGL++ E LE AF ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 MMAMNGKSVDGRQIRVDQA 81
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+GGL+W T+ L+N F +FG+++EC +M + +GR RGFGF+T+ D + ++ + +
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVKE 60
Query: 69 H 69
H
Sbjct: 61 H 61
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+S ++ N F RFG +++ +M+++++GRPRGFGF+T+ A+D +
Sbjct: 84 KIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLES 143
Query: 68 MHGREFGDRVISVNKAQPK 86
+ I V +AQP+
Sbjct: 144 --PLAICGKNIEVKRAQPR 160
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS+ VTE L+ AF +GK+ Q+ +R++GRPRGF F+ AI +
Sbjct: 3 IYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E+ R + VNKA+P+
Sbjct: 63 DGAEWMGRDLKVNKAKPR 80
>gi|428300369|ref|YP_007138675.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428236913|gb|AFZ02703.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 115
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
I+VG LS++VT+ L F +G + Q+ +R++GR RGFGF+ A AI +
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGTVTRVQLPTDRETGRVRGFGFVEMESEAAETAAISAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E+ R + VNKA+PK
Sbjct: 63 DGAEWMGRALKVNKARPK 80
>gi|347832409|emb|CCD48106.1| hypothetical protein [Botryotinia fuckeliana]
Length = 200
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY-------ADRRA 60
++F+GGL+W+ E L F FG + E ++ +RD+GR RGFGF+ Y +
Sbjct: 3 KLFIGGLAWHTDENALREKFSEFGTVEEAVVVKDRDTGRSRGFGFVRYGQGNPDSSPEAD 62
Query: 61 MDDAIREMHGREFGDRVISVNKAQPKMGGEVS 92
+ AI+EM+ EF R I V+KA + G + S
Sbjct: 63 AEKAIQEMNSVEFDGRTIRVDKASERAGNDRS 94
>gi|431916162|gb|ELK16414.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Pteropus
alecto]
Length = 425
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N++F+GGLSW+ +++ L RFG++++C I + +GR RGFGF+ + D ++D +
Sbjct: 197 NKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVL- 255
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGG 99
E+ + ++I +A+ G E + GG
Sbjct: 256 ELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGG 288
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGL++ E LE AF ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 MMAMNGKSVDGRQIRVDQA 81
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+G+ RGFGF+TY A+D +
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 68 MHGREFGDRVISVNKAQPK 86
+F DR I + +A+P+
Sbjct: 304 KF-IDFKDRKIEIKRAEPR 321
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K+ ++F+GGL+W+ TE L F ++G + + +IM + +GR RGFGF+++ ++D
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
+ ++ H +VI +A P+
Sbjct: 215 EVVKTQHI--LDGKVIDPKRAIPR 236
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+G+ RGFGF+TY A+D +
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 68 MHGREFGDRVISVNKAQPK 86
+F DR I + +A+P+
Sbjct: 304 KF-IDFKDRKIEIKRAEPR 321
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K+ ++F+GGL+W+ TE L F ++G + + +IM + +GR RGFGF+++ ++D
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214
Query: 63 DAIREMH 69
+ ++ H
Sbjct: 215 EVVKTQH 221
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+G+ RGFGF+TY A+D +
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 68 MHGREFGDRVISVNKAQPK 86
+F DR I + +A+P+
Sbjct: 304 KF-IDFKDRKIEIKRAEPR 321
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K+ ++F+GGL+W+ TE L F ++G + + +IM + +GR RGFGF+++ ++D
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
+ ++ H +VI +A P+
Sbjct: 215 EVVKTQHI--LDGKVIDPKRAIPR 236
>gi|222112646|ref|YP_002554910.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732090|gb|ACM34910.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 121
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + ++ LE F +FG + ++M+ERD+GR +GFGF+ AI+
Sbjct: 3 NKLYVGNLPYTFRDQDLEQTFSQFGAVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
HG+ +G R + VN+A+P
Sbjct: 63 GAHGQNYGGRDLVVNEARP 81
>gi|154313713|ref|XP_001556182.1| hypothetical protein BC1G_05706 [Botryotinia fuckeliana B05.10]
Length = 197
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITY-------ADRR 59
+++F+GGL+W+ E L F FG + E ++ +RD+GR RGFGF+ Y +
Sbjct: 2 SKLFIGGLAWHTDENALREKFSEFGTVEEAVVVKDRDTGRSRGFGFVRYGQGNPDSSPEA 61
Query: 60 AMDDAIREMHGREFGDRVISVNKAQPKMGGEVS 92
+ AI+EM+ EF R I V+KA + G + S
Sbjct: 62 DAEKAIQEMNSVEFDGRTIRVDKASERAGNDRS 94
>gi|327493225|gb|AEA86319.1| glycine-rich RNA-binding protein [Solanum nigrum]
Length = 165
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
Query: 44 SGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG------------EV 91
SGR RGFGF+T+ ++RAM+DAI M+G + R I+V+KAQP+ G +
Sbjct: 4 SGRSRGFGFVTFDEKRAMEDAIEAMNGMDLDGRAITVDKAQPQQGSGRDFDSDRPRDRDR 63
Query: 92 SDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGHWARDCPS 135
RG S G G R G DC+ CG+PGH+AR+CPS
Sbjct: 64 DRGRDRGRDRGSRDYGGGGGGRGSGGGDCYNCGKPGHFARECPS 107
>gi|307107921|gb|EFN56162.1| hypothetical protein CHLNCDRAFT_22355 [Chlorella variabilis]
Length = 191
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
A +++ FVGG+SW++ + +L AF F + +M+++ +GR RGFGF+ + D+R
Sbjct: 14 APVQQHKCFVGGISWHLDDHKLREAFAEFNPT-DAVVMMDKMTGRSRGFGFVMFGDKRDQ 72
Query: 62 DDAIREMHGREFGDRVISVNKA 83
D AI MH E R ISV +A
Sbjct: 73 DAAIEAMHNTEVDGRRISVTRA 94
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++ + +E AF +FG + ++M+ERD+GR +GFGF+ + AI
Sbjct: 3 NKLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAIE 62
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G++ G R + VN+A+P
Sbjct: 63 GMNGQQIGGRGLVVNEARP 81
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+G+ RGFGF+TY A+D +
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 68 MHGREFGDRVISVNKAQPK 86
+F DR I + +A+P+
Sbjct: 304 KF-IDFKDRKIEIKRAEPR 321
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K+ ++F+GGL+W+ TE L F ++G + + +IM + +GR RGFGF+++ ++D
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
+ ++ H +VI +A P+
Sbjct: 215 EVVKTQHI--LDGKVIDPKRAIPR 236
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 29/127 (22%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+G L + R LE+ F +G+++ C I G FGF+ + DRR +DA+
Sbjct: 3 LFIGRLDRDTRVRDLEDIFQPYGRLVRCDIK----GGAVYSFGFVEFEDRRDAEDALNRE 58
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPGH 128
+GR I+V A+ G +R D CF+C +PGH
Sbjct: 59 NGRNVRGVRIAVEWAK-------------------------GQNRSADSDSCFRCNKPGH 93
Query: 129 WARDCPS 135
WA+DCP+
Sbjct: 94 WAKDCPN 100
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGL ++ E LE AF ++G I + ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R+I V++A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|90075670|dbj|BAE87515.1| unnamed protein product [Macaca fascicularis]
Length = 135
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ + A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ + T F+++G+I + IM +R +G+PRGFGF+TYAD +D I +
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
H + + + + PK G+ D
Sbjct: 80 TH--VINGKQVEIKRTIPKGSGQSKD 103
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL VTE + ++ F ++GK+ E QI+ + ++ R RGFGFI + +D+ + E
Sbjct: 108 KIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSE 167
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 168 GNMIDMAGTQVEIKKAEPK 186
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
I+VG LSWN+ ++ L+N F +G++ +I+ ++ + R +GFGF+ A AI
Sbjct: 2 NIYVGNLSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEA 61
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGY 101
++G E R I VN+++PK GG GGGY
Sbjct: 62 LNGTEVDGRNIVVNESRPKEGGN------SGGGY 89
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RIF+GGL + + +LE F+ FG + E + + P GFGFI + D R +DAIRE
Sbjct: 3 RIFIGGLPDDASRTELEREFEHFGSMREVWV-----ARNPPGFGFIVFDDPRDAEDAIRE 57
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPG 127
M GR + V KA RG ++ R S + C+ CG+ G
Sbjct: 58 MDGRRVCGMRVRVEKA-------------RGPNSNNRNRSS------AQNEKCYNCGKIG 98
Query: 128 HWARDCPS 135
H +RDC S
Sbjct: 99 HLSRDCRS 106
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I E +M +R++ + RGF FIT+ A+R+
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVAQAT 85
>gi|294054726|ref|YP_003548384.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614059|gb|ADE54214.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 147
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
++VG LS++ T+ LE F G + + I+ +R+SGRPRGF F++ M+ AI +
Sbjct: 1 MYVGNLSFDATQEDLEGLFSAHGTVTDVFILKDRESGRPRGFAFVSMETPEEMNAAIEAL 60
Query: 69 HGREFGDRVISVNKAQP 85
+G EF R +++N+A+P
Sbjct: 61 NGEEFMGRNLTINEARP 77
>gi|449463368|ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
gi|449496860|ref|XP_004160246.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
Length = 347
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+GGL+ + T Q F +G+I + IM +R +G+PRGFGFITYAD +D I +
Sbjct: 20 KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSD 93
H + + + + PK G+ D
Sbjct: 80 TH--VINGKQVEIKRTIPKGQGQSKD 103
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ VTE + ++ F ++GKI+E QI+ + ++ R RGFGFI + + +D+ + +
Sbjct: 108 KIFVGGIPSTVTEDEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSK 167
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 168 GNMIDMSGTQVEIKKAEPK 186
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++ + L+ AF + G + ++M+ERD+GR +GFGF+ AI
Sbjct: 9 NKLYVGNLPYSFRDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAIS 68
Query: 67 EMHGREFGDRVISVNKAQP 85
M+G++FG R + VN+A+P
Sbjct: 69 AMNGQQFGGRGLVVNEARP 87
>gi|395815171|ref|XP_003781108.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Otolemur
garnettii]
Length = 393
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE AF ++G+I+E +M +R++ + RGF F+T+ A R+
Sbjct: 9 KLFIGGLNPETDEKALEAAFGKYGRIVEVLLMKDRETSKSRGFAFVTFESPADAKAAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVAQAT 85
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+G+ RGFGF+TY A+D +
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 68 MHGREFGDRVISVNKAQPK 86
+F DR I + +A+P+
Sbjct: 304 KF-IDFKDRKIEIKRAEPR 321
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K+ ++F+GGL+W+ TE L F ++G + + +IM + +GR RGFGF+++ ++D
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
+ ++ H +VI +A P+
Sbjct: 215 EVVKTQHI--LDGKVIDPKRAIPR 236
>gi|221112058|ref|XP_002166471.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Hydra magnipapillata]
Length = 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
RIF+GGL + + +LE F+ FG + E + + P GFGFI + D R +DAIRE
Sbjct: 3 RIFIGGLPDDASRTELEREFEHFGSMREVWV-----ARNPPGFGFIVFDDPRDAEDAIRE 57
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKCGRPG 127
M GR + V KA RG ++ R S + C+ CG+ G
Sbjct: 58 MDGRRVCGMRVRVEKA-------------RGPNSNNRNRSS------AQNEKCYNCGKIG 98
Query: 128 HWARDCPS 135
H +RDC S
Sbjct: 99 HLSRDCRS 106
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYAD 57
++FVGGLSW T+ L+ F R+G +++C +M +SGR RGFGF+T+AD
Sbjct: 20 KLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFAD 69
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD----D 63
++F+GGL NVTE L F R+GK++E IM +++ + RGFGF+++ D A++ D
Sbjct: 110 KVFLGGLPSNVTETDLRQFFMRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVERCVAD 169
Query: 64 AIREMHGREFGDRVISVNKAQPK-MGGEVSDHGYRGGG 100
+HG++ + + KA+P+ G+++D G G
Sbjct: 170 HFVNLHGKQ-----VEIKKAEPRDASGKMNDSGNTWGA 202
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSWNV L F G+++ + ++R +GR RGFG++ ++ A++ AI E+
Sbjct: 335 IFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAI-EL 393
Query: 69 HGREFGDRVISVNKAQP 85
+G+E R ++V+K+ P
Sbjct: 394 NGKEIDGRAVNVDKSNP 410
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG LS+ + + L AF G++ ++ +R+SGRP+GFG++ ++D A M
Sbjct: 435 LFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAM 494
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + ++ +QP+
Sbjct: 495 QGVELDGRSVRLDFSQPR 512
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ A+R+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKTLDGKAIKVAQAT 85
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGL ++ E LE AF ++G I + ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R+I V++A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L+++V + L+ AF FG + ++M++RD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIE 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
M+G+ R I VN+A+P+
Sbjct: 63 GMNGQSLSGRAIVVNEARPR 82
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGLS++ E+ LE F ++G+I E ++ +R++ R R FGF+T+ + DA
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|297844820|ref|XP_002890291.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336133|gb|EFH66550.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++FVGGLS L+ AF FGKI++ ++L+R+SG RGFGF+TY ++A++
Sbjct: 36 SKLFVGGLSPATDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEDANNAMQ 95
Query: 67 EMHGREFGDRVISVNKA 83
MH +E R+I V+ A
Sbjct: 96 CMHNKELDGRIIGVSPA 112
>gi|427796855|gb|JAA63879.1| Putative glycine rich protein, partial [Rhipicephalus pulchellus]
Length = 249
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 47/187 (25%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L LE F ++GK+ EC I+ + + F+ AI
Sbjct: 33 KLYVGSLPEGCDVASLEALFAKYGKVEECDIV--------KNYAFVHMNSEEESKLAIDA 84
Query: 68 MHGREFGDRVISV----NKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQDDCFKC 123
+H EF I+V +K +PK G GGRG C++C
Sbjct: 85 LHNSEFMGGKITVEASHSKVRPKPG--------------MGGRG-----------QCYRC 119
Query: 124 GRPGHWARDCPSAVGGRGGAGGSFS-----SRSRFGGVG--VRGDYLGGGRDRYIDDRYD 176
GR GHW+++CP R G+G +R+ GVG R Y GG DR++D
Sbjct: 120 GRQGHWSKECPRNPNARFGSGVPMMPPGGGPLARYPGVGGPERLGYGSGGPDRFMD---R 176
Query: 177 GGRYGDR 183
GG YGDR
Sbjct: 177 GGAYGDR 183
>gi|320102269|ref|YP_004177860.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
gi|319749551|gb|ADV61311.1| RNP-1 like RNA-binding protein [Isosphaera pallida ATCC 43644]
Length = 129
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+++VG L+++ TE L + F +G+++ QI+++R++ R RGFGFI + D+AI
Sbjct: 5 KLYVGNLTFDTTEDNLIDLFSEYGEVVSAQIIIDRETNRSRGFGFIEMSS--GADEAINA 62
Query: 68 MHGREFGDRVISVNKAQPK 86
+HG+++ R ++VN+A+P+
Sbjct: 63 LHGQDYRGRNLTVNEARPR 81
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
Length = 130
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W V + L AF +G++ E +++++R++GR RGFGF+T+ + A++
Sbjct: 10 SKLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQ 69
Query: 67 EMHGREFGDRVISVNKA 83
M G E G R I V+ A
Sbjct: 70 GMDGHELGGRSIRVDYA 86
>gi|121596408|ref|YP_988304.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608488|gb|ABM44228.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 121
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + ++ LE F +FG + ++M+ERD+GR +GFGF+ AI
Sbjct: 3 NKLYVGNLPYTFRDQDLEQTFSQFGAVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIH 62
Query: 67 EMHGREFGDRVISVNKAQP 85
HG+ +G R + VN+A+P
Sbjct: 63 GAHGQNYGGRDLVVNEARP 81
>gi|148241113|ref|YP_001226270.1| RNA-binding protein [Synechococcus sp. RCC307]
gi|147849423|emb|CAK26917.1| RNA-binding protein, RRM domain [Synechococcus sp. RCC307]
Length = 204
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG++ C + LERD+GR RGF F+ AD + AI +
Sbjct: 3 IFVGNLPFRAEQEDIIELFASFGEVANCSLPLERDTGRKRGFAFVEMADEATEERAIEGL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGTELMGRPLRINKAEPR 80
>gi|123967549|ref|YP_001008407.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. AS9601]
gi|123197659|gb|ABM69300.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. AS9601]
Length = 203
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + F FG+++ C + LERD+GR RGF FI AD AI +
Sbjct: 3 IFVGNLPFRAEREDVIQLFAPFGEVLNCSLPLERDTGRKRGFAFIEMADEAIESTAIDGL 62
Query: 69 HGREFGDRVISVNKAQP 85
GRE R + +NKA+P
Sbjct: 63 QGRELMGRPLRINKAEP 79
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGL++ E LE AF ++G+I E ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 MMAMNGKSVDGRQIRVDQA 81
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N +F+GGL+W +TE + NAF FG++ ++ E DSGRP+GFG++ + + A+
Sbjct: 495 NTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALE 554
Query: 67 EMHGREFGDRVISVN 81
M+G+ G R I ++
Sbjct: 555 TMNGQALGGRPIRID 569
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
++VG LSWNV L++ F+++G +++ ++ +RDSGR RGFG++ +A A +E
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 69 HGREFGDRVISVNKAQPKMG 88
HG+E R + V+ QP G
Sbjct: 456 HGKELDGRALRVD-LQPARG 474
>gi|430813261|emb|CCJ29365.1| unnamed protein product [Pneumocystis jirovecii]
Length = 272
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+F+ G++ + E++LE F RFG +++C I+ + + RGFGF+T A D AI
Sbjct: 68 LFISGIAPRMDEKELEEIFSRFGNVVKCSIVSDPYTKESRGFGFVTMATPEDADKAIEAA 127
Query: 69 HGREFGDRVISVNKAQ 84
+G+E+ RV SV KA+
Sbjct: 128 NGQEYYGRVFSVEKAR 143
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG LSW+V + L+N F+ G +I +++ ER + R RG+G++ ++ + A + A++EM
Sbjct: 180 IFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERAVKEM 239
Query: 69 HGREFGDRVISVNKAQPKMGG 89
HG++ R I+ + + K G
Sbjct: 240 HGKQIDGREINCDMSTSKPAG 260
>gi|407035882|gb|EKE37908.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 300
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FV + + + F G + + +++ +++G+ RGFG++ + D A + + E
Sbjct: 141 VFVKNIPYGWATNDMYQYFASSGPV-KTRVITNKETGKSRGFGYLDFVDLEAANKFVEEH 199
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSG---GRGSYGADRPGGQDDCFKCGR 125
G E R + ++ A K GG+ ++G + G + S G+ + GG + CF CG+
Sbjct: 200 QGEEVDGRPLFLDLADGKKGGDKDNNGGKFGAFGSSNKTGKQHTYKGKQGGDNVCFNCGK 259
Query: 126 PGHWARDCPS 135
PGH +R+CP
Sbjct: 260 PGHMSRECPE 269
>gi|303271523|ref|XP_003055123.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463097|gb|EEH60375.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 432
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 10 FVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMH 69
VG +S++ +E+ L AF G+I +C+++ +RD+GRP+GF FIT+ D A A++ M
Sbjct: 1 MVGNMSYDTSEQTLAGAFGHLGRITDCKVITDRDTGRPKGFAFITFDDPNAAMQAVQTMS 60
Query: 70 GREFGDRVISVNKAQ 84
G+ R + V A+
Sbjct: 61 GQNVDGRSVRVEMAK 75
>gi|544421|sp|Q99069.1|GRP1_SORBI RecName: Full=Glycine-rich RNA-binding protein 1
gi|21623|emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 142
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 23 LENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNK 82
L +AF +G+++E +I+L+R++ R RGFGF+T++ AM AI M+G+E R I+VN+
Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNE 62
Query: 83 AQP 85
AQ
Sbjct: 63 AQS 65
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+G+ RGFGF+TY A+D +
Sbjct: 231 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 290
Query: 68 MHGREFGDRVISVNKAQPK 86
+F DR I + +A+P+
Sbjct: 291 KF-IDFKDRKIEIKRAEPR 308
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 3 GKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMD 62
K+ ++F+GGL+W+ TE L F ++G + + +IM + +GR RGFGF+++ ++D
Sbjct: 142 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 201
Query: 63 DAIREMHGREFGDRVISVNKAQPK 86
+ ++ H +VI +A P+
Sbjct: 202 EVVKTQHI--LDGKVIDPKRAIPR 223
>gi|67484322|ref|XP_657381.1| RNA-binding protein [Entamoeba histolytica HM-1:IMSS]
gi|56474635|gb|EAL51997.1| RNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449706848|gb|EMD46607.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 301
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FV + + + F G + + +++ +++G+ RGFG++ + D A + + E
Sbjct: 142 VFVKNIPYGWATNDMYQYFASSGPV-KTRVITNKETGKSRGFGYLDFVDLEAANKFVEEH 200
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSG---GRGSYGADRPGGQDDCFKCGR 125
G E R + ++ A K GG+ ++G + G + S G+ + GG + CF CG+
Sbjct: 201 QGEEVDGRPLFLDLADGKKGGDKDNNGGKFGAFGSSNKTGKQHTYKGKQGGDNVCFNCGK 260
Query: 126 PGHWARDCPS 135
PGH +R+CP
Sbjct: 261 PGHMSRECPE 270
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG LS++ TE L++ F G + E +M ++ +G+ RGFGF+T + AI
Sbjct: 3 NKLYVGNLSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFVTMSSSEEAQKAID 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
HG+ R ++VN+A+P+
Sbjct: 63 LFHGKTVQGRALTVNEARPR 82
>gi|406946237|gb|EKD77506.1| glycine-rich RNA-binding protein [uncultured bacterium]
Length = 113
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+++I+VG LS+N TE +L + F +FG I + +++++ ++GR +GFGFITYA + + A+
Sbjct: 3 QSKIYVGNLSYNTTEDELRDYFSQFGNIEDIKLIIDFNTGRSKGFGFITYASIQDCESAV 62
Query: 66 REMHGREFGDRVISVNKA 83
+G + G R + VN A
Sbjct: 63 TTANGVDMGGRKLKVNIA 80
>gi|47551207|ref|NP_999784.1| stage specific activator protein [Strongylocentrotus purpuratus]
gi|4071008|gb|AAC98546.1| stage specific activator protein [Strongylocentrotus purpuratus]
Length = 382
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG+S T+ L F G + + IM + D+G+ RGFGF+T A++ +R
Sbjct: 100 KVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAVEKLVR- 158
Query: 68 MHGREFGDRVISVNKAQPKM 87
MH E + + + KAQPKM
Sbjct: 159 MHHLELKGKSMEIKKAQPKM 178
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDS-GRPRGFGFITYADRRA 60
G++ +IFVGG+ N F++FGK+ + +M+++D G+ +GFGF+T+AD
Sbjct: 1 MGEEIGKIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPAC 60
Query: 61 MDDAIRE 67
+DD E
Sbjct: 61 VDDVTNE 67
>gi|319765041|ref|YP_004128978.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827233|ref|YP_004390536.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
gi|317119602|gb|ADV02091.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312605|gb|AEB87020.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
Length = 116
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++ ++ LE F ++G + ++M+ERD+GR +GFGF+ AI+
Sbjct: 3 NKLYVGNLPYSFRDQDLEQTFSQYGSVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
HG+ +G R + VN+A+P
Sbjct: 63 GAHGQNYGGRDLVVNEARP 81
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS+ E L AF ++G I + ++ ++++GR RGFGF+ Y + DA
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 LDAMNGKTLDGRAIRVDEA 81
>gi|75076898|sp|Q4R813.1|HNRGT_MACFA RecName: Full=RNA-binding motif protein, X-linked-like-2;
AltName: Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
gi|67968804|dbj|BAE00759.1| unnamed protein product [Macaca fascicularis]
Length = 394
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ A R+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVAQAT 85
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +V ++ E F ++G II+ Q+ML++D+G+ RGFGF+TY A+D +
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 68 MHGREFGDRVISVNKAQPK 86
+F DR I + +A+P+
Sbjct: 304 KF-IDFKDRKIEIKRAEPR 321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 2 AGKDENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAM 61
K+ ++F+GGL+W+ TE L F ++G + + +IM + +GR RGFGF+++ ++
Sbjct: 154 LSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSV 213
Query: 62 DDAIREMH 69
D+ ++ H
Sbjct: 214 DEVVKTQH 221
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGG+ +TE + ++ F FG+IIE QIM++ + R RGFGFIT+ + ++D+
Sbjct: 511 KIFVGGIPPGLTEVEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVDNIFSG 570
Query: 68 MHGREFGDRVISVNKAQPK 86
E G + + + KA PK
Sbjct: 571 DRIHELGGKQVEIKKAVPK 589
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++FVGG++W TE + F ++G+I + IM+++ +GRPRGFGF+T+ D D ++
Sbjct: 422 KLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 481
Query: 68 MHGREFGDRVISVNKAQPK 86
H R + V + P+
Sbjct: 482 DH--IIDGRAVEVKRTVPR 498
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL + TE F ++G+I++ IM ++ + +PRGFGFITY++ +D + +
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 68 MHGREFGDRVISVNKAQPK 86
+H EF + + + + PK
Sbjct: 84 IH--EFNGKQVEIKRTIPK 100
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +TE ++ F ++G +++ QIM + + R RGFGFI ++ + +DD +
Sbjct: 112 KIFVGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLAN 171
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + + KA+PK
Sbjct: 172 GNMIDLAGAKVEIKKAEPK 190
>gi|427703571|ref|YP_007046793.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427346739|gb|AFY29452.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 178
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
IFVG L + + + F FG+++ C + LERD+GR RGF FI AD AI +
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVVNCSLPLERDTGRKRGFAFIEMADADTETRAIDAL 62
Query: 69 HGREFGDRVISVNKAQPK 86
G E R + +NKA+P+
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|358379116|gb|EHK16797.1| hypothetical protein TRIVIDRAFT_174423 [Trichoderma virens
Gv29-8]
Length = 174
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+++F+GGL+W+ E L F+ FG + E ++ +RD+GR RGFGF+ Y AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYVQEADAQAAIA 61
Query: 67 EMHGREFGDRVISVNKA 83
M+ EF R I V+KA
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|410340767|gb|JAA39330.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340769|gb|JAA39331.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340771|gb|JAA39332.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340773|gb|JAA39333.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340775|gb|JAA39334.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340777|gb|JAA39335.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
+E ++FVGGL++N E+ LE+ F FG I E ++ +R++ R RGFGFIT+ A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFPIPEHASVA 63
Query: 65 IREMHGREFGDRVISVNKA 83
+R M+G R I V+ A
Sbjct: 64 MRAMNGESLDGRQIRVDHA 82
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
D+ ++FVGG+SW E +L F +G++ + +M ++ +GRPRGFGF+ ++D +D
Sbjct: 4 DQGKLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63
Query: 65 IREMHGREFGDRVISVNKAQPKMGGEVS 92
+++ H R + V +A + +VS
Sbjct: 64 LQDKH--NIDTREVDVKRAMSREEQQVS 89
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IFVGGL +T+ + F+ +G + + IM ++ + RPRGFGF+++ A+D + +
Sbjct: 111 KIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHK 170
Query: 68 MHGREFGDRVISVNKAQPK 86
+ + + V +A PK
Sbjct: 171 TF-HDLSGKQVEVKRALPK 188
>gi|153208628|ref|ZP_01946885.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
gi|120575889|gb|EAX32513.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
Length = 103
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+N+I+VG LS++VT +L++ F ++G+I E +++++R++GR +GF FITY + A +A+
Sbjct: 3 QNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAV 62
Query: 66 REMHGREFGDRVISVNKA 83
+ +G + R I VN A
Sbjct: 63 SKANGIDLQGRKIRVNIA 80
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++F+GGLS+ E L AF ++G I + ++ ++++GR RGFGF+ Y + DA
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R I V++A
Sbjct: 63 LEGMNGKTLDGRAIRVDEA 81
>gi|165919016|ref|ZP_02219102.1| RNA-binding protein [Coxiella burnetii Q321]
gi|165917271|gb|EDR35875.1| RNA-binding protein [Coxiella burnetii Q321]
Length = 107
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+N+I+VG LS++VT +L++ F ++G+I E +++++R++GR +GF FITY + A +A+
Sbjct: 3 QNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAV 62
Query: 66 REMHGREFGDRVISVNKA 83
+ +G + R I VN A
Sbjct: 63 SKANGIDLQGRKIRVNIA 80
>gi|161830439|ref|YP_001597044.1| RNA-binding protein [Coxiella burnetii RSA 331]
gi|161762306|gb|ABX77948.1| RNA-binding protein [Coxiella burnetii RSA 331]
Length = 107
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 6 ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAI 65
+N+I+VG LS++VT +L++ F ++G+I E +++++R++GR +GF FITY + A +A+
Sbjct: 3 QNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAV 62
Query: 66 REMHGREFGDRVISVNKA 83
+ +G + R I VN A
Sbjct: 63 SKANGIDLQGRKIRVNIA 80
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 29/127 (22%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R++VG L VT R++E+ F FG + + + +P GF FI + DRR +DAIR+
Sbjct: 3 RVYVGNLDPRVTAREIEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDRRDAEDAIRD 57
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD-DCFKCGRP 126
+ G+ +G+R + G G G DR GG D C++CG P
Sbjct: 58 LDGK----------------------NGWRVELSTKAGSGR-GRDRSGGSDMKCYECGEP 94
Query: 127 GHWARDC 133
GH+AR+C
Sbjct: 95 GHFAREC 101
>gi|347819855|ref|ZP_08873289.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 128
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L ++ + L+ F ++G + ++M+ERD+GR +GFGF+ AIR
Sbjct: 21 NKLYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIR 80
Query: 67 EMHGREFGDRVISVNKAQP 85
+HG+ FG R + VN+A+P
Sbjct: 81 GVHGQSFGGRDLVVNEARP 99
>gi|328786023|ref|XP_623841.3| PREDICTED: RNA-binding protein lark-like isoform 1 [Apis mellifera]
Length = 356
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 39/196 (19%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+IFVG L+ N Q+ F ++G ++EC I+ R +GF+ ++DAI+
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIV--------RNYGFVHLEATGDVNDAIK 140
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD--DCFKCG 124
E++GR + + V + ++ RPG D C++CG
Sbjct: 141 ELNGRMVDGQAMKVQISTSRV-----------------------RQRPGMGDPEQCYRCG 177
Query: 125 RPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD-GGRYGDR 183
R GHW+++CP GG GG R R G R Y ++ DR GGR+GD
Sbjct: 178 RGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPPPPPPFLRDRLMGGGRFGDY 232
Query: 184 DRYDSKDSKYGSRDRY 199
+ Y + +RD Y
Sbjct: 233 ESYYDRRGFEDTRDLY 248
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+G L+ T ++ F+++GK++EC ++ + +GF+ + A +AI+
Sbjct: 11 KIFIGNLADKTTNADIKPLFEKYGKVVECDVV--------KNYGFVHMENEEAGRNAIQN 62
Query: 68 MHGREFGDRVISVNKAQPKMG 88
++G + I A+ + G
Sbjct: 63 LNGHIVHGQEIKCEAAKSRKG 83
>gi|160901477|ref|YP_001567059.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333917515|ref|YP_004491247.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160367061|gb|ABX38674.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333747715|gb|AEF92892.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 124
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L + + LE AF FG + ++M+ERD+GR +GFGF+ AI+
Sbjct: 3 NKLYVGNLPYTFRDSDLEQAFSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 67 EMHGREFGDRVISVNKAQP 85
+HG+ G R + VN+A+P
Sbjct: 63 GLHGQNRGGRDLVVNEARP 81
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 29/127 (22%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
R++VG L VT R++E+ F FG + + + +P GF FI + DRR +DAIR+
Sbjct: 3 RVYVGNLDPRVTAREIEDEFRVFGVLRSVWV-----ARKPPGFAFIDFDDRRDAEDAIRD 57
Query: 68 MHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD-DCFKCGRP 126
+ G+ +G+R + G G G DR GG D C++CG P
Sbjct: 58 LDGK----------------------NGWRVELSTKAGSGR-GRDRSGGSDMKCYECGEP 94
Query: 127 GHWARDC 133
GH+AR+C
Sbjct: 95 GHFAREC 101
>gi|332211654|ref|XP_003254929.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Nomascus
leucogenys]
Length = 393
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+I+E +M +R++ + RGF F+T+ A R+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68
Query: 68 MHGREFGDRVISVNKAQ 84
M+G+ + I V +A
Sbjct: 69 MNGKSLDGKAIKVAQAT 85
>gi|380021805|ref|XP_003694747.1| PREDICTED: RNA-binding protein lark-like [Apis florea]
Length = 351
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 39/196 (19%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
+IFVG L+ N Q+ F ++G ++EC I+ R +GF+ ++DAI+
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIV--------RNYGFVHLEATGDVNDAIK 140
Query: 67 EMHGREFGDRVISVNKAQPKMGGEVSDHGYRGGGYSSGGRGSYGADRPGGQD--DCFKCG 124
E++GR + + V + ++ RPG D C++CG
Sbjct: 141 ELNGRMVDGQAMKVQISTSRV-----------------------RQRPGMGDPEQCYRCG 177
Query: 125 RPGHWARDCPSAVGGRGGAGGSFSSRSRFGGVGVRGDYLGGGRDRYIDDRYD-GGRYGDR 183
R GHW+++CP GG GG R R G R Y ++ DR GGR+GD
Sbjct: 178 RGGHWSKECPK--GGMGGGPDRNGYRDRMFG---RDPYPPPPPPPFLRDRLMGGGRFGDY 232
Query: 184 DRYDSKDSKYGSRDRY 199
+ Y + +RD Y
Sbjct: 233 ESYYDRRGFEDTRDLY 248
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
+IF+G L+ T ++ F+++GK++EC ++ + +GF+ + A +AI+
Sbjct: 11 KIFIGNLADKTTNADIKPLFEKYGKVVECDVV--------KNYGFVHMENEEAGRNAIQN 62
Query: 68 MHGREFGDRVISVNKAQPKMG 88
++G + I A+ + G
Sbjct: 63 LNGHIVHGQEIKCEAAKSRKG 83
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 5 DENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDA 64
DE ++FVGGL ++ E LE AF ++G I + ++ +R++ R RGFGF+T+ + DA
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 65 IREMHGREFGDRVISVNKA 83
+ M+G+ R+I V++A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+G L++ T+ L F G++ E +++ +RDSGR +GFGF+TY + D AI+E
Sbjct: 4 KLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAIKE 63
Query: 68 MHGREFGDRVISVNKAQPK 86
+ E R I VN+A+P+
Sbjct: 64 LDNSELDGRNIHVNEARPR 82
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N+++VG L+++V + L AF +FG + ++M++R++GR +GFGF+ AI
Sbjct: 3 NKLYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAIN 62
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G+ G R I VN+A+P+
Sbjct: 63 GLNGQAIGGRAIVVNEARPR 82
>gi|163916618|gb|AAI57793.1| LOC100135403 protein [Xenopus (Silurana) tropicalis]
Length = 375
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%)
Query: 8 RIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIRE 67
++F+GGL+ E+ LE F ++G+++E +M +R++ + RGF F+T+ DA RE
Sbjct: 9 KLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 68 MHGREFGDRVISVNKA 83
++G+ + I V +A
Sbjct: 69 LNGKALDGKPIKVEQA 84
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%)
Query: 9 IFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREM 68
+FVG LSWN+ E L F+ FG+I+ C+I+ +R++GR +GFG++ +A A EM
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Query: 69 HGREFGDRVISVNKAQPKMGGEVSDHGYRGGGY 101
H E R ++V+ + P+ + R Y
Sbjct: 296 HQYELDGRPLNVDFSTPRQKPDAGKTNDRANKY 328
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 7 NRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIR 66
N +F+G LS++ T ++ F +G I + +RD+G +GFG++ + + A+
Sbjct: 337 NTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALD 396
Query: 67 EMHGREFGDRVISVNKAQPK 86
++G++ R I ++ A P+
Sbjct: 397 ALNGQDIAGRNIRIDYAAPR 416
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.143 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,784,944,595
Number of Sequences: 23463169
Number of extensions: 315006736
Number of successful extensions: 1304467
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17791
Number of HSP's successfully gapped in prelim test: 17590
Number of HSP's that attempted gapping in prelim test: 1027798
Number of HSP's gapped (non-prelim): 167436
length of query: 280
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 140
effective length of database: 9,074,351,707
effective search space: 1270409238980
effective search space used: 1270409238980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)