TIFY2A protein (Arabidopsis thaliana)

STRING 9.05

TIFY2A protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	TIFY2A	TIFY2A; sequence-specific DNA binding / transcription factor/ zinc ion binding; member of a novel family of plant-specific GATA-type transcription factors. ; Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity) (302 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	GNC	GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor; GATA, nitrate- [...] (398 aa)	•	•	•	0.935
	ZML1	ZML1 (ZIM-LIKE 1); sequence-specific DNA binding / transcription factor/ zinc ion binding; memb [...] (297 aa)	•	•	•	0.925
	AT5G58575	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (181 aa)	•			0.923
	ACR6	ACR6; amino acid binding; Member of a small family of ACT domain containing proteins in Arabido [...] (433 aa)	•			0.923
	AT5G63230	unknown protein; glycosyl hydrolase family protein 17 (111 aa)		•		0.746
	AT5G63225	unknown protein; glycosyl hydrolase family protein 17 (110 aa)		•		0.746
	TIFY8	TIFY8 (TIFY DOMAIN PROTEIN 8); TIFY DOMAIN PROTEIN 8 (TIFY8); FUNCTIONS IN- molecular_function [...] (361 aa)		•		0.679
	AT3G55430	glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative; glycosyl hydrolase family [...] (449 aa)		•		0.679
	GATL10	GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase [...] (365 aa)		•		0.595
	AT3G20750	zinc finger (GATA type) family protein; zinc finger (GATA type) family protein; FUNCTIONS IN- t [...] (208 aa)		•		0.565

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink