Query 023561
Match_columns 280
No_of_seqs 121 out of 1774
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 04:59:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023561.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023561hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.7E-52 3.8E-57 374.7 23.2 228 14-268 1-229 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 1.4E-50 2.9E-55 356.5 23.7 258 15-277 1-259 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 2.7E-50 5.8E-55 349.7 23.6 265 11-277 2-267 (375)
4 KOG0023 Alcohol dehydrogenase, 100.0 1.7E-46 3.6E-51 327.4 22.0 247 12-277 5-255 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 1.3E-44 2.7E-49 316.3 20.7 233 15-271 3-240 (354)
6 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.4E-41 2.9E-46 314.1 29.1 259 17-277 2-260 (368)
7 PLN02740 Alcohol dehydrogenase 100.0 4.5E-41 9.6E-46 312.0 27.9 265 12-277 6-273 (381)
8 cd08300 alcohol_DH_class_III c 100.0 1.2E-40 2.6E-45 307.7 29.1 261 15-277 1-261 (368)
9 cd08301 alcohol_DH_plants Plan 100.0 3.9E-40 8.3E-45 304.3 29.2 261 15-277 1-262 (369)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 2.1E-40 4.6E-45 306.3 27.3 256 17-277 1-264 (371)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 8.5E-40 1.8E-44 300.9 27.6 248 16-277 1-250 (358)
12 cd08239 THR_DH_like L-threonin 100.0 1.7E-39 3.8E-44 296.2 26.9 234 17-277 1-236 (339)
13 PLN02827 Alcohol dehydrogenase 100.0 4.4E-39 9.5E-44 298.5 28.8 260 12-277 8-268 (378)
14 cd08277 liver_alcohol_DH_like 100.0 1.7E-38 3.7E-43 293.1 28.1 259 15-277 1-259 (365)
15 COG0604 Qor NADPH:quinone redu 100.0 6.8E-39 1.5E-43 291.1 23.9 212 17-278 1-217 (326)
16 TIGR02819 fdhA_non_GSH formald 100.0 1.9E-38 4.2E-43 295.5 27.3 241 16-277 2-259 (393)
17 COG1063 Tdh Threonine dehydrog 100.0 1E-38 2.2E-43 292.9 25.0 238 17-278 1-244 (350)
18 PRK09880 L-idonate 5-dehydroge 100.0 4.2E-38 9.1E-43 288.1 25.1 214 14-255 2-223 (343)
19 cd08299 alcohol_DH_class_I_II_ 100.0 4.9E-37 1.1E-41 284.3 29.6 264 11-277 2-265 (373)
20 PLN02586 probable cinnamyl alc 100.0 1.7E-37 3.8E-42 286.0 26.0 224 12-255 8-237 (360)
21 TIGR03201 dearomat_had 6-hydro 100.0 3.9E-37 8.4E-42 282.3 25.3 230 20-274 2-239 (349)
22 TIGR02822 adh_fam_2 zinc-bindi 100.0 9.4E-37 2E-41 277.9 24.1 212 19-254 1-217 (329)
23 PRK10309 galactitol-1-phosphat 100.0 2.2E-36 4.8E-41 276.8 26.6 233 17-279 1-235 (347)
24 cd08278 benzyl_alcohol_DH Benz 100.0 8E-36 1.7E-40 275.2 28.7 258 15-277 1-259 (365)
25 cd05279 Zn_ADH1 Liver alcohol 100.0 1.5E-35 3.2E-40 273.5 28.4 258 17-277 1-258 (365)
26 cd08230 glucose_DH Glucose deh 100.0 5.9E-36 1.3E-40 275.0 25.4 214 17-255 1-227 (355)
27 PLN02178 cinnamyl-alcohol dehy 100.0 1.1E-35 2.5E-40 275.3 27.1 230 19-275 9-245 (375)
28 cd08231 MDR_TM0436_like Hypoth 100.0 1.8E-35 3.8E-40 272.1 27.3 244 18-277 2-254 (361)
29 cd08233 butanediol_DH_like (2R 100.0 3.4E-35 7.5E-40 269.2 27.1 233 17-277 1-246 (351)
30 KOG1197 Predicted quinone oxid 100.0 6.8E-36 1.5E-40 253.1 19.6 215 12-279 4-222 (336)
31 cd08285 NADP_ADH NADP(H)-depen 100.0 6.4E-35 1.4E-39 267.4 27.7 237 17-277 1-240 (351)
32 PLN02514 cinnamyl-alcohol dehy 100.0 7.8E-35 1.7E-39 268.0 26.8 225 15-255 8-234 (357)
33 cd05278 FDH_like Formaldehyde 100.0 3.3E-34 7.2E-39 261.5 26.4 237 17-277 1-241 (347)
34 cd08296 CAD_like Cinnamyl alco 100.0 5.2E-34 1.1E-38 259.7 27.4 225 17-268 1-226 (333)
35 cd05284 arabinose_DH_like D-ar 100.0 1.3E-33 2.9E-38 257.0 26.7 234 17-277 1-240 (340)
36 PRK10083 putative oxidoreducta 100.0 9.4E-34 2E-38 258.1 25.6 222 17-266 1-223 (339)
37 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.7E-33 3.7E-38 257.9 27.2 233 17-277 1-248 (350)
38 cd08237 ribitol-5-phosphate_DH 100.0 4.9E-34 1.1E-38 261.2 21.1 205 15-249 1-212 (341)
39 cd08279 Zn_ADH_class_III Class 100.0 4.7E-33 1E-37 256.5 27.6 255 17-277 1-256 (363)
40 cd08283 FDH_like_1 Glutathione 100.0 1.2E-32 2.5E-37 256.1 27.8 248 17-277 1-259 (386)
41 cd08286 FDH_like_ADH2 formalde 100.0 1.1E-32 2.4E-37 251.7 27.1 236 17-277 1-240 (345)
42 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.9E-32 4.2E-37 250.8 26.5 236 17-277 1-248 (350)
43 cd08246 crotonyl_coA_red croto 100.0 1.6E-32 3.5E-37 255.4 26.3 243 13-279 9-291 (393)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.8E-32 6E-37 249.1 27.3 235 17-276 1-237 (345)
45 PRK09422 ethanol-active dehydr 100.0 3.2E-32 6.9E-37 247.8 27.1 234 17-278 1-236 (338)
46 cd08238 sorbose_phosphate_red 100.0 1.6E-32 3.4E-37 257.2 25.4 227 15-278 1-263 (410)
47 cd08263 Zn_ADH10 Alcohol dehyd 100.0 7.2E-32 1.6E-36 248.8 27.4 254 17-277 1-261 (367)
48 PRK05396 tdh L-threonine 3-deh 100.0 5E-32 1.1E-36 247.2 26.0 233 17-277 1-237 (341)
49 cd08265 Zn_ADH3 Alcohol dehydr 100.0 9.2E-32 2E-36 249.8 26.8 237 16-277 28-280 (384)
50 cd08282 PFDH_like Pseudomonas 100.0 1.8E-31 4E-36 247.0 28.1 242 17-277 1-248 (375)
51 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.5E-31 3.2E-36 243.6 26.8 231 17-277 1-232 (337)
52 cd08284 FDH_like_2 Glutathione 100.0 1.9E-31 4.1E-36 243.3 26.8 235 17-277 1-240 (344)
53 cd08287 FDH_like_ADH3 formalde 100.0 2.2E-31 4.8E-36 243.0 26.9 233 17-277 1-242 (345)
54 cd08235 iditol_2_DH_like L-idi 100.0 2.7E-31 5.9E-36 242.1 27.2 233 17-277 1-239 (343)
55 TIGR01751 crot-CoA-red crotony 100.0 2.1E-31 4.6E-36 248.5 26.7 241 14-277 5-285 (398)
56 PRK13771 putative alcohol dehy 100.0 1.2E-31 2.7E-36 243.5 24.4 213 17-254 1-214 (334)
57 PLN02702 L-idonate 5-dehydroge 100.0 5.2E-31 1.1E-35 242.8 28.0 238 14-277 15-259 (364)
58 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 5.6E-31 1.2E-35 238.9 26.6 234 17-277 1-237 (338)
59 cd05285 sorbitol_DH Sorbitol d 100.0 5.5E-31 1.2E-35 240.6 26.3 232 19-277 1-239 (343)
60 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1E-30 2.2E-35 236.4 26.9 223 17-268 1-224 (332)
61 cd08297 CAD3 Cinnamyl alcohol 100.0 1.1E-30 2.4E-35 238.0 27.3 235 17-278 1-240 (341)
62 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.2E-30 2.5E-35 236.3 25.6 226 17-277 1-228 (325)
63 cd05283 CAD1 Cinnamyl alcohol 100.0 1.5E-30 3.1E-35 237.4 25.8 221 18-255 1-222 (337)
64 cd08291 ETR_like_1 2-enoyl thi 100.0 6.4E-31 1.4E-35 238.4 23.2 207 17-277 1-217 (324)
65 cd08245 CAD Cinnamyl alcohol d 100.0 3.2E-30 6.9E-35 233.9 26.2 214 18-255 1-215 (330)
66 cd08266 Zn_ADH_like1 Alcohol d 100.0 5.2E-30 1.1E-34 231.8 26.7 235 17-277 1-240 (342)
67 cd05281 TDH Threonine dehydrog 100.0 3E-30 6.6E-35 235.6 25.3 232 17-277 1-236 (341)
68 cd08242 MDR_like Medium chain 100.0 3E-30 6.5E-35 233.1 24.9 207 17-255 1-208 (319)
69 cd08236 sugar_DH NAD(P)-depend 100.0 4.4E-30 9.4E-35 234.3 26.0 231 17-277 1-232 (343)
70 cd08298 CAD2 Cinnamyl alcohol 100.0 3.5E-30 7.7E-35 233.5 25.0 215 17-255 1-220 (329)
71 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.7E-30 1.2E-34 233.4 26.3 222 17-277 1-238 (341)
72 cd08234 threonine_DH_like L-th 100.0 5.8E-30 1.3E-34 232.4 26.1 230 17-277 1-231 (334)
73 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.1E-29 2.3E-34 229.0 26.3 233 17-277 1-238 (306)
74 cd08292 ETR_like_2 2-enoyl thi 100.0 6E-30 1.3E-34 231.0 24.4 207 17-277 1-213 (324)
75 TIGR00692 tdh L-threonine 3-de 100.0 1.6E-29 3.5E-34 230.7 25.3 227 23-277 5-235 (340)
76 TIGR03366 HpnZ_proposed putati 100.0 3.7E-30 8.1E-35 229.3 20.5 184 73-277 1-192 (280)
77 cd08232 idonate-5-DH L-idonate 100.0 1.9E-29 4.1E-34 229.8 24.7 215 21-255 2-219 (339)
78 TIGR01202 bchC 2-desacetyl-2-h 100.0 8.5E-30 1.8E-34 230.1 20.8 183 16-244 1-187 (308)
79 cd08293 PTGR2 Prostaglandin re 100.0 3.7E-29 8E-34 228.4 25.1 195 29-277 23-229 (345)
80 TIGR02817 adh_fam_1 zinc-bindi 100.0 4.1E-29 8.9E-34 227.0 24.1 209 18-277 1-221 (336)
81 PRK10754 quinone oxidoreductas 100.0 1.6E-28 3.5E-33 222.4 25.0 210 16-277 1-214 (327)
82 cd08274 MDR9 Medium chain dehy 100.0 1.8E-28 3.9E-33 223.9 24.7 223 17-277 1-248 (350)
83 cd08295 double_bond_reductase_ 100.0 2.2E-28 4.7E-33 223.2 24.7 208 15-277 6-226 (338)
84 cd08294 leukotriene_B4_DH_like 100.0 2.3E-28 4.9E-33 221.3 24.6 200 16-277 2-216 (329)
85 cd08290 ETR 2-enoyl thioester 100.0 3.7E-28 7.9E-33 221.3 23.4 212 17-277 1-226 (341)
86 KOG0025 Zn2+-binding dehydroge 100.0 2E-28 4.4E-33 211.0 19.9 195 13-256 16-219 (354)
87 PLN03154 putative allyl alcoho 100.0 2.7E-27 5.8E-32 217.3 26.6 211 12-277 4-233 (348)
88 cd08276 MDR7 Medium chain dehy 100.0 3.9E-27 8.4E-32 213.2 27.3 230 17-277 1-234 (336)
89 TIGR02825 B4_12hDH leukotriene 100.0 2.8E-27 6.1E-32 214.6 24.4 188 29-277 19-212 (325)
90 cd08249 enoyl_reductase_like e 100.0 1.3E-27 2.7E-32 218.3 22.1 214 17-277 1-226 (339)
91 PTZ00354 alcohol dehydrogenase 100.0 3.3E-27 7.1E-32 213.7 24.4 209 16-277 1-215 (334)
92 cd05188 MDR Medium chain reduc 100.0 3.1E-27 6.8E-32 206.9 23.0 204 43-277 1-206 (271)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 7.6E-27 1.6E-31 210.7 25.6 193 17-255 1-200 (325)
94 cd08244 MDR_enoyl_red Possible 100.0 9.2E-27 2E-31 210.0 25.6 209 17-277 1-216 (324)
95 cd08250 Mgc45594_like Mgc45594 100.0 1.5E-26 3.1E-31 209.7 25.3 206 16-277 1-212 (329)
96 cd08289 MDR_yhfp_like Yhfp put 100.0 1.6E-26 3.4E-31 209.0 24.5 211 17-277 1-218 (326)
97 cd08243 quinone_oxidoreductase 100.0 2.9E-26 6.3E-31 205.9 25.3 210 17-277 1-213 (320)
98 cd08248 RTN4I1 Human Reticulon 100.0 2.1E-26 4.7E-31 210.3 23.0 208 17-277 1-232 (350)
99 cd08252 AL_MDR Arginate lyase 99.9 6E-26 1.3E-30 206.0 24.8 210 17-277 1-222 (336)
100 TIGR02823 oxido_YhdH putative 99.9 8.2E-26 1.8E-30 204.2 25.0 207 18-275 1-214 (323)
101 cd08253 zeta_crystallin Zeta-c 99.9 1.3E-25 2.8E-30 201.3 25.6 213 17-277 1-218 (325)
102 cd08271 MDR5 Medium chain dehy 99.9 1.5E-25 3.2E-30 201.7 25.8 210 17-277 1-214 (325)
103 cd05276 p53_inducible_oxidored 99.9 1.2E-25 2.7E-30 201.0 23.7 208 17-277 1-213 (323)
104 cd08288 MDR_yhdh Yhdh putative 99.9 1.7E-25 3.8E-30 202.0 24.9 193 17-255 1-200 (324)
105 KOG1198 Zinc-binding oxidoredu 99.9 4.2E-26 9E-31 208.1 20.4 196 29-277 20-230 (347)
106 cd05282 ETR_like 2-enoyl thioe 99.9 1.5E-25 3.3E-30 202.0 23.5 196 29-277 14-212 (323)
107 cd08269 Zn_ADH9 Alcohol dehydr 99.9 1.6E-25 3.5E-30 200.9 23.4 197 24-277 3-203 (312)
108 cd08272 MDR6 Medium chain dehy 99.9 3.9E-25 8.4E-30 198.7 25.1 212 17-278 1-217 (326)
109 cd08247 AST1_like AST1 is a cy 99.9 3.4E-25 7.3E-30 203.0 25.1 212 18-277 2-230 (352)
110 cd05286 QOR2 Quinone oxidoredu 99.9 7.5E-25 1.6E-29 195.6 25.0 207 18-278 1-211 (320)
111 cd08268 MDR2 Medium chain dehy 99.9 2E-24 4.4E-29 193.9 25.6 213 17-277 1-218 (328)
112 cd08270 MDR4 Medium chain dehy 99.9 7E-25 1.5E-29 196.3 21.4 181 17-252 1-183 (305)
113 cd08273 MDR8 Medium chain dehy 99.9 1.5E-24 3.3E-29 196.3 23.3 204 17-277 1-208 (331)
114 cd05288 PGDH Prostaglandin deh 99.9 4.7E-24 1E-28 193.1 24.2 203 17-277 2-219 (329)
115 TIGR02824 quinone_pig3 putativ 99.9 9.4E-24 2E-28 189.4 24.5 208 17-277 1-213 (325)
116 cd08251 polyketide_synthase po 99.9 9.5E-24 2.1E-28 187.7 23.7 190 36-277 2-194 (303)
117 cd05289 MDR_like_2 alcohol deh 99.9 2.6E-23 5.7E-28 185.2 22.3 191 17-255 1-197 (309)
118 cd08241 QOR1 Quinone oxidoredu 99.9 5.8E-23 1.2E-27 183.9 24.0 207 17-277 1-213 (323)
119 COG2130 Putative NADP-dependen 99.9 2.7E-23 5.8E-28 180.9 20.2 193 28-277 26-224 (340)
120 cd08267 MDR1 Medium chain dehy 99.9 5.6E-23 1.2E-27 184.4 21.7 194 30-277 15-213 (319)
121 cd08275 MDR3 Medium chain dehy 99.9 1.6E-22 3.5E-27 182.8 24.6 206 18-277 1-211 (337)
122 cd05195 enoyl_red enoyl reduct 99.9 1.2E-22 2.5E-27 178.8 21.3 180 42-277 1-184 (293)
123 PF08240 ADH_N: Alcohol dehydr 99.9 2E-23 4.4E-28 160.3 9.4 108 41-170 1-109 (109)
124 smart00829 PKS_ER Enoylreducta 99.9 8.3E-22 1.8E-26 173.4 20.7 175 46-277 2-180 (288)
125 cd08255 2-desacetyl-2-hydroxye 99.8 9.2E-18 2E-22 148.5 16.3 131 69-253 19-150 (277)
126 KOG1196 Predicted NAD-dependen 99.8 2.3E-16 4.9E-21 137.4 21.7 204 16-276 3-227 (343)
127 KOG1202 Animal-type fatty acid 99.6 4.1E-16 9E-21 154.1 9.8 188 29-279 1429-1632(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 98.8 3.3E-08 7.2E-13 77.5 8.9 63 212-278 1-64 (130)
129 PRK09424 pntA NAD(P) transhydr 98.2 6.2E-06 1.3E-10 79.1 8.7 55 199-254 162-217 (509)
130 cd00401 AdoHcyase S-adenosyl-L 97.5 0.00041 8.9E-09 65.1 8.5 58 190-248 189-247 (413)
131 TIGR01035 hemA glutamyl-tRNA r 97.5 3.7E-06 8E-11 79.2 -5.2 134 72-247 88-226 (417)
132 cd05213 NAD_bind_Glutamyl_tRNA 97.3 0.00037 8E-09 63.2 5.0 82 165-247 139-224 (311)
133 TIGR00561 pntA NAD(P) transhyd 97.1 0.0018 3.9E-08 62.3 7.5 50 200-250 162-211 (511)
134 PRK00517 prmA ribosomal protei 96.9 0.0046 9.9E-08 54.2 8.4 83 155-244 78-160 (250)
135 PRK05476 S-adenosyl-L-homocyst 96.8 0.0082 1.8E-07 56.6 9.7 58 189-247 198-256 (425)
136 PRK12771 putative glutamate sy 96.7 0.0046 9.9E-08 60.6 7.3 56 198-254 133-209 (564)
137 PF01488 Shikimate_DH: Shikima 96.7 0.0067 1.4E-07 48.1 7.0 48 199-246 9-57 (135)
138 PRK00045 hemA glutamyl-tRNA re 96.6 0.0043 9.4E-08 58.7 6.1 135 72-247 90-228 (423)
139 TIGR00936 ahcY adenosylhomocys 96.5 0.012 2.7E-07 55.1 8.3 56 191-247 183-239 (406)
140 PRK08306 dipicolinate synthase 96.4 0.025 5.5E-07 50.9 9.8 46 201-247 151-196 (296)
141 COG4221 Short-chain alcohol de 96.4 0.016 3.5E-07 50.2 8.1 74 201-277 5-86 (246)
142 PRK08017 oxidoreductase; Provi 96.3 0.016 3.5E-07 50.1 7.8 47 203-250 3-50 (256)
143 PRK05993 short chain dehydroge 96.2 0.04 8.7E-07 48.6 9.8 48 201-249 3-51 (277)
144 PLN02494 adenosylhomocysteinas 96.1 0.024 5.2E-07 54.0 8.2 57 190-247 241-298 (477)
145 PRK08324 short chain dehydroge 96.0 0.03 6.6E-07 56.2 8.8 78 155-244 386-464 (681)
146 PF11017 DUF2855: Protein of u 96.0 0.18 3.9E-06 45.6 12.7 96 155-255 90-191 (314)
147 PRK08177 short chain dehydroge 95.8 0.054 1.2E-06 46.1 8.6 43 203-246 2-45 (225)
148 COG3967 DltE Short-chain dehyd 95.8 0.052 1.1E-06 46.0 8.0 68 201-269 4-76 (245)
149 PRK05786 fabG 3-ketoacyl-(acyl 95.6 0.088 1.9E-06 44.9 9.2 41 201-242 4-45 (238)
150 PF01262 AlaDh_PNT_C: Alanine 95.6 0.039 8.4E-07 45.3 6.4 48 202-250 20-67 (168)
151 COG0300 DltE Short-chain dehyd 95.6 0.084 1.8E-06 46.7 8.8 44 200-244 4-48 (265)
152 PRK06139 short chain dehydroge 95.6 0.089 1.9E-06 48.1 9.3 48 200-248 5-57 (330)
153 TIGR00518 alaDH alanine dehydr 95.5 0.067 1.4E-06 49.8 8.4 46 201-247 166-212 (370)
154 PRK05693 short chain dehydroge 95.5 0.071 1.5E-06 46.8 8.2 46 203-249 2-48 (274)
155 PRK03369 murD UDP-N-acetylmura 95.4 0.054 1.2E-06 52.2 7.6 50 198-248 8-57 (488)
156 PRK12549 shikimate 5-dehydroge 95.3 0.11 2.4E-06 46.4 8.7 44 200-243 125-168 (284)
157 TIGR02853 spore_dpaA dipicolin 95.2 0.15 3.3E-06 45.7 9.5 46 201-247 150-195 (287)
158 PRK06182 short chain dehydroge 95.2 0.093 2E-06 46.0 8.0 47 201-248 2-49 (273)
159 PRK06949 short chain dehydroge 95.2 0.11 2.3E-06 45.0 8.1 43 200-243 7-50 (258)
160 PRK06057 short chain dehydroge 95.2 0.11 2.3E-06 45.2 8.1 46 201-247 6-53 (255)
161 PRK04148 hypothetical protein; 95.2 0.091 2E-06 41.6 6.9 55 195-251 10-64 (134)
162 PRK06101 short chain dehydroge 95.1 0.15 3.2E-06 43.9 8.8 43 203-246 2-45 (240)
163 PRK07825 short chain dehydroge 95.0 0.12 2.5E-06 45.4 8.1 44 202-246 5-50 (273)
164 PRK12550 shikimate 5-dehydroge 95.0 0.15 3.2E-06 45.4 8.7 46 198-243 118-163 (272)
165 PTZ00075 Adenosylhomocysteinas 95.0 0.19 4E-06 48.1 9.7 80 166-247 217-298 (476)
166 COG0169 AroE Shikimate 5-dehyd 95.0 0.12 2.7E-06 46.1 8.0 46 199-244 123-168 (283)
167 PRK07060 short chain dehydroge 94.9 0.23 4.9E-06 42.5 9.4 47 201-248 8-56 (245)
168 PRK11873 arsM arsenite S-adeno 94.9 0.076 1.6E-06 46.9 6.5 48 196-244 72-120 (272)
169 PRK12829 short chain dehydroge 94.9 0.15 3.2E-06 44.2 8.3 47 197-244 6-53 (264)
170 cd01075 NAD_bind_Leu_Phe_Val_D 94.9 0.26 5.5E-06 41.8 9.4 47 200-247 26-73 (200)
171 PRK06200 2,3-dihydroxy-2,3-dih 94.8 0.16 3.4E-06 44.3 8.2 43 201-244 5-48 (263)
172 PRK14027 quinate/shikimate deh 94.8 0.14 3.1E-06 45.8 8.0 44 200-243 125-168 (283)
173 PRK06196 oxidoreductase; Provi 94.8 0.18 4E-06 45.4 8.9 41 201-242 25-66 (315)
174 PRK08339 short chain dehydroge 94.7 0.19 4.1E-06 44.0 8.6 42 201-243 7-49 (263)
175 PRK08217 fabG 3-ketoacyl-(acyl 94.7 0.26 5.6E-06 42.2 9.3 41 201-242 4-45 (253)
176 TIGR01809 Shik-DH-AROM shikima 94.7 0.094 2E-06 46.9 6.6 42 201-242 124-165 (282)
177 PRK06500 short chain dehydroge 94.6 0.27 6E-06 42.1 9.3 46 201-247 5-52 (249)
178 PRK07904 short chain dehydroge 94.6 0.29 6.4E-06 42.6 9.5 39 199-238 5-45 (253)
179 PRK06198 short chain dehydroge 94.6 0.25 5.5E-06 42.7 9.1 41 200-240 4-45 (260)
180 PRK00258 aroE shikimate 5-dehy 94.6 0.21 4.6E-06 44.5 8.6 44 200-243 121-164 (278)
181 PRK05867 short chain dehydroge 94.5 0.17 3.8E-06 43.7 7.8 42 201-243 8-50 (253)
182 PRK07831 short chain dehydroge 94.5 0.2 4.3E-06 43.6 8.1 43 199-242 14-58 (262)
183 PF02826 2-Hacid_dh_C: D-isome 94.5 0.13 2.9E-06 42.5 6.6 46 200-246 34-79 (178)
184 PRK08265 short chain dehydroge 94.4 0.21 4.6E-06 43.5 8.3 46 201-247 5-52 (261)
185 KOG1209 1-Acyl dihydroxyaceton 94.4 0.22 4.8E-06 42.6 7.7 77 200-277 5-86 (289)
186 TIGR03325 BphB_TodD cis-2,3-di 94.3 0.2 4.3E-06 43.7 7.8 43 201-244 4-47 (262)
187 cd01080 NAD_bind_m-THF_DH_Cycl 94.2 0.39 8.5E-06 39.5 8.7 72 180-254 22-95 (168)
188 PRK07677 short chain dehydroge 94.1 0.22 4.9E-06 43.0 7.7 41 202-243 1-42 (252)
189 TIGR01832 kduD 2-deoxy-D-gluco 94.1 0.35 7.6E-06 41.5 8.8 35 201-236 4-39 (248)
190 TIGR01318 gltD_gamma_fam gluta 94.1 0.18 3.8E-06 48.4 7.4 52 201-253 140-212 (467)
191 PRK05866 short chain dehydroge 94.1 0.29 6.4E-06 43.7 8.5 41 201-242 39-80 (293)
192 PRK06953 short chain dehydroge 94.0 0.42 9.1E-06 40.4 9.1 45 203-248 2-47 (222)
193 PRK06603 enoyl-(acyl carrier p 94.0 0.29 6.2E-06 42.8 8.2 36 200-236 6-44 (260)
194 PRK12548 shikimate 5-dehydroge 94.0 0.27 5.8E-06 44.1 8.1 37 200-236 124-160 (289)
195 PRK09291 short chain dehydroge 94.0 0.37 8E-06 41.6 8.8 41 202-243 2-43 (257)
196 PRK13394 3-hydroxybutyrate deh 93.9 0.46 9.9E-06 41.0 9.3 40 201-241 6-46 (262)
197 PRK07814 short chain dehydroge 93.9 0.18 3.8E-06 44.1 6.6 41 201-242 9-50 (263)
198 PF13460 NAD_binding_10: NADH( 93.9 0.65 1.4E-05 37.9 9.7 36 205-241 1-37 (183)
199 cd01078 NAD_bind_H4MPT_DH NADP 93.9 0.36 7.8E-06 40.3 8.2 43 200-243 26-69 (194)
200 PRK07576 short chain dehydroge 93.8 0.31 6.8E-06 42.6 8.1 41 200-241 7-48 (264)
201 PRK06841 short chain dehydroge 93.8 0.28 6.2E-06 42.3 7.8 44 201-245 14-58 (255)
202 PRK07109 short chain dehydroge 93.8 0.54 1.2E-05 42.9 9.9 42 200-242 6-48 (334)
203 PRK06180 short chain dehydroge 93.8 0.3 6.4E-06 43.0 8.0 43 201-244 3-46 (277)
204 PRK06125 short chain dehydroge 93.8 0.54 1.2E-05 40.8 9.5 41 201-242 6-47 (259)
205 COG0031 CysK Cysteine synthase 93.8 0.65 1.4E-05 41.8 10.0 75 194-269 54-132 (300)
206 PRK06505 enoyl-(acyl carrier p 93.8 0.29 6.3E-06 43.2 7.9 36 201-237 6-44 (271)
207 PRK05872 short chain dehydroge 93.8 0.19 4.1E-06 44.9 6.7 45 201-246 8-54 (296)
208 PRK08267 short chain dehydroge 93.8 0.47 1E-05 41.1 9.1 41 203-244 2-43 (260)
209 PRK07326 short chain dehydroge 93.7 0.32 6.9E-06 41.4 7.8 41 201-242 5-46 (237)
210 PRK07533 enoyl-(acyl carrier p 93.7 0.33 7.2E-06 42.3 8.0 37 201-238 9-48 (258)
211 PRK07231 fabG 3-ketoacyl-(acyl 93.7 0.2 4.2E-06 43.0 6.5 41 201-242 4-45 (251)
212 PRK08264 short chain dehydroge 93.7 0.48 1E-05 40.4 8.8 41 201-241 5-46 (238)
213 PRK09072 short chain dehydroge 93.6 0.5 1.1E-05 41.1 9.0 42 201-243 4-46 (263)
214 PRK12939 short chain dehydroge 93.6 0.58 1.3E-05 40.0 9.3 42 200-242 5-47 (250)
215 PRK06484 short chain dehydroge 93.6 0.4 8.7E-06 46.2 9.1 47 200-247 3-51 (520)
216 PRK05875 short chain dehydroge 93.6 0.36 7.9E-06 42.2 8.1 40 201-241 6-46 (276)
217 PRK12481 2-deoxy-D-gluconate 3 93.6 0.62 1.3E-05 40.3 9.5 46 201-247 7-55 (251)
218 PRK07523 gluconate 5-dehydroge 93.5 0.23 5E-06 43.0 6.7 40 201-241 9-49 (255)
219 PRK12749 quinate/shikimate deh 93.5 0.32 6.9E-06 43.7 7.7 37 200-236 122-158 (288)
220 PRK12742 oxidoreductase; Provi 93.5 0.71 1.5E-05 39.2 9.6 47 201-248 5-54 (237)
221 PRK13940 glutamyl-tRNA reducta 93.5 0.41 8.9E-06 45.2 8.7 50 197-246 176-226 (414)
222 PRK05717 oxidoreductase; Valid 93.4 0.4 8.8E-06 41.5 8.0 47 200-247 8-56 (255)
223 PRK06484 short chain dehydroge 93.4 0.48 1E-05 45.7 9.3 47 200-247 267-315 (520)
224 PRK05876 short chain dehydroge 93.4 0.74 1.6E-05 40.6 9.8 42 200-242 4-46 (275)
225 PRK07478 short chain dehydroge 93.4 0.41 8.9E-06 41.3 8.0 41 201-242 5-46 (254)
226 PRK07454 short chain dehydroge 93.3 0.52 1.1E-05 40.3 8.5 42 200-242 4-46 (241)
227 PRK07062 short chain dehydroge 93.3 0.25 5.3E-06 43.0 6.5 41 201-242 7-48 (265)
228 PLN03209 translocon at the inn 93.3 0.21 4.6E-06 48.9 6.5 47 195-242 73-120 (576)
229 PRK06914 short chain dehydroge 93.2 0.56 1.2E-05 41.2 8.7 41 201-242 2-43 (280)
230 TIGR03206 benzo_BadH 2-hydroxy 93.2 0.46 1E-05 40.7 8.0 41 201-242 2-43 (250)
231 PRK12769 putative oxidoreducta 93.2 0.25 5.5E-06 49.4 7.1 52 200-252 325-397 (654)
232 cd01065 NAD_bind_Shikimate_DH 93.2 0.69 1.5E-05 36.8 8.5 48 200-247 17-65 (155)
233 PRK12828 short chain dehydroge 93.1 0.26 5.7E-06 41.8 6.3 37 201-238 6-43 (239)
234 PRK07067 sorbitol dehydrogenas 93.1 0.55 1.2E-05 40.6 8.4 43 201-244 5-48 (257)
235 PRK08862 short chain dehydroge 93.1 0.52 1.1E-05 40.4 8.2 41 201-242 4-45 (227)
236 PRK07024 short chain dehydroge 93.1 0.53 1.1E-05 40.8 8.3 41 202-243 2-43 (257)
237 PRK12809 putative oxidoreducta 93.1 0.27 5.9E-06 49.0 7.2 53 201-254 309-382 (639)
238 PRK08703 short chain dehydroge 93.1 0.27 5.9E-06 42.1 6.4 41 201-242 5-46 (239)
239 PRK07890 short chain dehydroge 93.1 0.3 6.4E-06 42.2 6.7 43 200-243 3-46 (258)
240 PRK12823 benD 1,6-dihydroxycyc 93.1 0.45 9.7E-06 41.2 7.8 40 201-241 7-47 (260)
241 cd05311 NAD_bind_2_malic_enz N 93.1 0.53 1.2E-05 40.6 8.0 36 200-235 23-60 (226)
242 PF02737 3HCDH_N: 3-hydroxyacy 93.0 0.32 6.9E-06 40.4 6.4 39 204-243 1-39 (180)
243 PRK07063 short chain dehydroge 93.0 0.3 6.5E-06 42.4 6.6 41 201-242 6-47 (260)
244 PLN02780 ketoreductase/ oxidor 93.0 0.25 5.5E-06 44.8 6.3 41 201-242 52-93 (320)
245 PRK08213 gluconate 5-dehydroge 93.0 0.31 6.8E-06 42.2 6.7 43 200-243 10-53 (259)
246 PRK05653 fabG 3-ketoacyl-(acyl 93.0 0.65 1.4E-05 39.4 8.6 40 201-241 4-44 (246)
247 PRK07035 short chain dehydroge 93.0 0.32 7E-06 41.9 6.7 41 201-242 7-48 (252)
248 PRK05854 short chain dehydroge 92.9 0.31 6.7E-06 44.0 6.6 41 201-242 13-54 (313)
249 PRK06138 short chain dehydroge 92.8 0.56 1.2E-05 40.2 8.0 41 201-242 4-45 (252)
250 PRK08340 glucose-1-dehydrogena 92.8 0.6 1.3E-05 40.5 8.2 38 204-242 2-40 (259)
251 PRK08628 short chain dehydroge 92.8 0.55 1.2E-05 40.6 7.9 43 201-244 6-49 (258)
252 PRK08945 putative oxoacyl-(acy 92.7 0.34 7.4E-06 41.6 6.4 42 199-241 9-51 (247)
253 PRK08277 D-mannonate oxidoredu 92.7 0.59 1.3E-05 41.0 8.0 40 201-241 9-49 (278)
254 PRK06194 hypothetical protein; 92.7 0.34 7.5E-06 42.6 6.6 41 201-242 5-46 (287)
255 PRK06172 short chain dehydroge 92.7 0.36 7.8E-06 41.6 6.6 39 201-240 6-45 (253)
256 PRK08589 short chain dehydroge 92.6 0.57 1.2E-05 41.1 7.9 35 201-236 5-40 (272)
257 PRK08303 short chain dehydroge 92.6 0.71 1.5E-05 41.6 8.6 34 201-235 7-41 (305)
258 PRK11705 cyclopropane fatty ac 92.6 0.55 1.2E-05 43.9 8.0 58 185-244 151-208 (383)
259 PRK08415 enoyl-(acyl carrier p 92.6 0.69 1.5E-05 40.9 8.3 35 201-236 4-41 (274)
260 PRK09186 flagellin modificatio 92.5 0.37 8.1E-06 41.5 6.5 41 201-242 3-44 (256)
261 PRK05884 short chain dehydroge 92.5 0.84 1.8E-05 38.9 8.6 44 204-248 2-47 (223)
262 PF00106 adh_short: short chai 92.5 0.42 9E-06 38.3 6.4 33 203-235 1-34 (167)
263 TIGR00507 aroE shikimate 5-deh 92.5 0.71 1.5E-05 40.8 8.3 43 199-242 114-156 (270)
264 PRK06483 dihydromonapterin red 92.5 0.92 2E-05 38.6 8.8 45 202-247 2-48 (236)
265 PRK08251 short chain dehydroge 92.5 0.91 2E-05 38.9 8.8 40 202-242 2-42 (248)
266 PRK06114 short chain dehydroge 92.5 0.74 1.6E-05 39.8 8.3 35 201-236 7-42 (254)
267 PRK06124 gluconate 5-dehydroge 92.4 0.41 9E-06 41.3 6.7 41 200-241 9-50 (256)
268 COG2518 Pcm Protein-L-isoaspar 92.4 0.93 2E-05 38.6 8.3 69 175-248 48-120 (209)
269 TIGR00406 prmA ribosomal prote 92.4 0.95 2.1E-05 40.5 9.0 44 199-244 157-200 (288)
270 PF02254 TrkA_N: TrkA-N domain 92.3 0.7 1.5E-05 34.9 7.1 46 205-252 1-46 (116)
271 PRK08085 gluconate 5-dehydroge 92.3 0.43 9.4E-06 41.2 6.7 40 201-241 8-48 (254)
272 PRK12367 short chain dehydroge 92.3 1.1 2.4E-05 38.9 9.2 35 201-236 13-48 (245)
273 PRK09242 tropinone reductase; 92.3 0.43 9.4E-06 41.3 6.6 41 201-242 8-49 (257)
274 PRK07453 protochlorophyllide o 92.3 0.4 8.8E-06 43.2 6.6 41 201-242 5-46 (322)
275 PF00670 AdoHcyase_NAD: S-aden 92.2 0.7 1.5E-05 37.8 7.1 53 193-246 13-66 (162)
276 PRK07774 short chain dehydroge 92.2 0.47 1E-05 40.7 6.6 40 201-241 5-45 (250)
277 PRK08159 enoyl-(acyl carrier p 92.2 0.82 1.8E-05 40.3 8.3 36 200-236 8-46 (272)
278 PRK08643 acetoin reductase; Va 92.1 0.46 9.9E-06 41.0 6.6 40 202-242 2-42 (256)
279 PRK12384 sorbitol-6-phosphate 92.1 0.68 1.5E-05 40.0 7.6 39 202-241 2-41 (259)
280 PRK07806 short chain dehydroge 92.1 0.96 2.1E-05 38.8 8.5 35 201-236 5-40 (248)
281 PRK07791 short chain dehydroge 92.0 1.8 3.8E-05 38.4 10.3 36 200-236 4-40 (286)
282 KOG1201 Hydroxysteroid 17-beta 92.0 0.99 2.2E-05 40.4 8.4 46 200-246 36-86 (300)
283 PRK06197 short chain dehydroge 92.0 0.41 9E-06 42.8 6.3 40 200-240 14-54 (306)
284 PRK12826 3-ketoacyl-(acyl-carr 91.9 0.96 2.1E-05 38.6 8.3 39 201-240 5-44 (251)
285 PRK12936 3-ketoacyl-(acyl-carr 91.9 1.7 3.6E-05 37.0 9.7 42 201-243 5-47 (245)
286 TIGR01963 PHB_DH 3-hydroxybuty 91.9 0.46 1E-05 40.8 6.3 41 202-243 1-42 (255)
287 PRK08226 short chain dehydroge 91.9 0.99 2.1E-05 39.1 8.4 41 201-242 5-46 (263)
288 PRK01438 murD UDP-N-acetylmura 91.8 0.75 1.6E-05 44.1 8.2 50 200-250 14-68 (480)
289 PRK12429 3-hydroxybutyrate deh 91.8 0.52 1.1E-05 40.5 6.6 41 201-242 3-44 (258)
290 COG1748 LYS9 Saccharopine dehy 91.8 0.62 1.4E-05 43.5 7.3 44 203-246 2-45 (389)
291 PRK07074 short chain dehydroge 91.8 0.93 2E-05 39.1 8.1 41 202-243 2-43 (257)
292 PRK06720 hypothetical protein; 91.8 1.1 2.4E-05 36.7 8.1 38 201-239 15-53 (169)
293 PRK06079 enoyl-(acyl carrier p 91.8 0.91 2E-05 39.4 8.0 44 201-245 6-52 (252)
294 PRK07856 short chain dehydroge 91.7 1.3 2.7E-05 38.2 8.9 37 201-238 5-42 (252)
295 PRK10538 malonic semialdehyde 91.7 0.98 2.1E-05 38.9 8.1 43 204-247 2-46 (248)
296 PRK08690 enoyl-(acyl carrier p 91.7 1 2.2E-05 39.3 8.3 36 200-236 4-42 (261)
297 PRK07102 short chain dehydroge 91.6 1.4 3E-05 37.8 8.9 38 203-241 2-40 (243)
298 PRK06935 2-deoxy-D-gluconate 3 91.6 0.89 1.9E-05 39.4 7.8 35 200-235 13-48 (258)
299 KOG1014 17 beta-hydroxysteroid 91.5 1.7 3.6E-05 39.2 9.4 68 200-271 47-124 (312)
300 PRK06181 short chain dehydroge 91.5 0.56 1.2E-05 40.7 6.5 38 202-240 1-39 (263)
301 PRK08263 short chain dehydroge 91.5 1.1 2.3E-05 39.4 8.2 42 202-244 3-45 (275)
302 PF02558 ApbA: Ketopantoate re 91.4 0.46 1E-05 37.7 5.4 41 205-247 1-41 (151)
303 PRK07792 fabG 3-ketoacyl-(acyl 91.4 1.6 3.5E-05 39.1 9.4 35 200-235 10-45 (306)
304 PRK08993 2-deoxy-D-gluconate 3 91.4 1.2 2.6E-05 38.5 8.3 36 200-236 8-44 (253)
305 PRK06463 fabG 3-ketoacyl-(acyl 91.4 1 2.2E-05 39.0 7.8 46 201-247 6-53 (255)
306 PRK06398 aldose dehydrogenase; 91.3 0.55 1.2E-05 40.9 6.1 37 201-238 5-42 (258)
307 KOG1205 Predicted dehydrogenas 91.3 0.88 1.9E-05 40.6 7.4 49 200-249 10-63 (282)
308 PF13823 ADH_N_assoc: Alcohol 91.3 0.17 3.6E-06 27.3 1.7 22 17-39 1-22 (23)
309 PRK06482 short chain dehydroge 91.3 1.1 2.3E-05 39.3 8.0 41 203-244 3-44 (276)
310 PLN02253 xanthoxin dehydrogena 91.2 0.66 1.4E-05 40.7 6.6 40 201-241 17-57 (280)
311 PRK07666 fabG 3-ketoacyl-(acyl 91.1 0.72 1.6E-05 39.4 6.6 40 201-241 6-46 (239)
312 PRK06940 short chain dehydroge 91.1 1.5 3.3E-05 38.5 8.9 39 202-242 2-40 (275)
313 PRK06128 oxidoreductase; Provi 91.0 1.8 3.9E-05 38.6 9.4 34 201-235 54-88 (300)
314 PRK07577 short chain dehydroge 91.0 0.99 2.1E-05 38.2 7.4 37 201-238 2-39 (234)
315 PLN00203 glutamyl-tRNA reducta 90.9 1.1 2.4E-05 43.6 8.3 44 201-244 265-308 (519)
316 PRK08642 fabG 3-ketoacyl-(acyl 90.9 2.3 5E-05 36.4 9.7 41 201-242 4-46 (253)
317 PRK00811 spermidine synthase; 90.7 0.86 1.9E-05 40.7 6.9 44 200-244 75-118 (283)
318 PRK00377 cbiT cobalt-precorrin 90.7 0.87 1.9E-05 38.2 6.6 49 194-243 33-82 (198)
319 PRK08261 fabG 3-ketoacyl-(acyl 90.7 1.8 3.9E-05 41.0 9.5 47 201-248 209-259 (450)
320 PRK08063 enoyl-(acyl carrier p 90.7 1.5 3.2E-05 37.6 8.2 38 201-239 3-42 (250)
321 PF06325 PrmA: Ribosomal prote 90.7 0.49 1.1E-05 42.6 5.3 74 163-243 127-201 (295)
322 PRK07984 enoyl-(acyl carrier p 90.6 1.4 3.1E-05 38.6 8.2 35 201-236 5-42 (262)
323 PRK06179 short chain dehydroge 90.6 0.6 1.3E-05 40.7 5.8 39 201-240 3-42 (270)
324 PLN02366 spermidine synthase 90.6 0.89 1.9E-05 41.2 6.9 45 199-244 89-133 (308)
325 PF12847 Methyltransf_18: Meth 90.6 0.81 1.7E-05 34.0 5.8 42 201-244 1-43 (112)
326 PRK11761 cysM cysteine synthas 90.6 4.3 9.4E-05 36.4 11.4 61 194-254 55-117 (296)
327 PRK12743 oxidoreductase; Provi 90.6 1.6 3.4E-05 37.8 8.3 36 202-238 2-39 (256)
328 PLN00141 Tic62-NAD(P)-related 90.5 1.7 3.7E-05 37.6 8.5 40 201-241 16-56 (251)
329 KOG0725 Reductases with broad 90.5 0.79 1.7E-05 40.7 6.4 43 200-243 6-49 (270)
330 COG0373 HemA Glutamyl-tRNA red 90.5 1.8 3.9E-05 40.8 9.0 53 195-247 171-224 (414)
331 PRK07832 short chain dehydroge 90.5 0.78 1.7E-05 40.1 6.4 38 203-241 1-39 (272)
332 PRK06113 7-alpha-hydroxysteroi 90.4 0.89 1.9E-05 39.3 6.6 40 201-241 10-50 (255)
333 PRK06701 short chain dehydroge 90.4 2.5 5.5E-05 37.5 9.6 38 198-236 42-80 (290)
334 PF08659 KR: KR domain; Inter 90.2 1.8 3.8E-05 35.8 8.0 45 204-248 2-54 (181)
335 PRK08219 short chain dehydroge 90.2 2 4.4E-05 36.0 8.6 40 202-243 3-43 (227)
336 COG4122 Predicted O-methyltran 90.2 1.9 4E-05 37.1 8.2 83 194-279 52-139 (219)
337 PRK02472 murD UDP-N-acetylmura 90.1 1.4 3E-05 41.8 8.1 47 201-248 4-54 (447)
338 PRK10669 putative cation:proto 90.1 0.8 1.7E-05 44.9 6.7 47 203-250 418-464 (558)
339 TIGR02469 CbiT precorrin-6Y C5 90.1 1.4 3E-05 33.2 6.7 50 193-243 11-60 (124)
340 PRK07097 gluconate 5-dehydroge 90.1 0.96 2.1E-05 39.4 6.6 41 201-242 9-50 (265)
341 COG2264 PrmA Ribosomal protein 90.0 1.6 3.5E-05 39.3 7.9 81 156-243 121-202 (300)
342 cd05211 NAD_bind_Glu_Leu_Phe_V 90.0 2.1 4.5E-05 36.7 8.4 47 200-246 21-77 (217)
343 PRK08261 fabG 3-ketoacyl-(acyl 90.0 0.33 7.2E-06 46.0 3.8 59 196-255 28-92 (450)
344 PLN03013 cysteine synthase 89.9 4.1 9E-05 38.6 11.0 60 194-253 166-228 (429)
345 PRK12937 short chain dehydroge 89.9 3.3 7.1E-05 35.2 9.7 35 200-235 3-38 (245)
346 PRK06997 enoyl-(acyl carrier p 89.9 1.4 3E-05 38.5 7.4 33 201-234 5-40 (260)
347 PF07991 IlvN: Acetohydroxy ac 89.9 1.3 2.7E-05 36.3 6.5 46 201-247 3-49 (165)
348 PLN02520 bifunctional 3-dehydr 89.8 0.9 2E-05 44.3 6.7 42 201-243 378-419 (529)
349 KOG1252 Cystathionine beta-syn 89.7 1.7 3.6E-05 39.6 7.7 59 194-253 95-157 (362)
350 PRK13656 trans-2-enoyl-CoA red 89.7 2.2 4.7E-05 40.0 8.7 33 200-234 39-74 (398)
351 PRK08594 enoyl-(acyl carrier p 89.6 1.6 3.5E-05 38.0 7.6 34 201-235 6-42 (257)
352 PF00070 Pyr_redox: Pyridine n 89.6 0.92 2E-05 32.0 5.0 32 204-236 1-32 (80)
353 PF02353 CMAS: Mycolic acid cy 89.6 0.69 1.5E-05 41.1 5.3 49 193-243 54-102 (273)
354 PRK12938 acetyacetyl-CoA reduc 89.6 3.2 6.9E-05 35.4 9.4 31 201-232 2-33 (246)
355 COG2230 Cfa Cyclopropane fatty 89.5 2.3 4.9E-05 38.0 8.4 54 189-244 60-113 (283)
356 PRK05565 fabG 3-ketoacyl-(acyl 89.4 1.2 2.6E-05 37.9 6.6 40 202-242 5-46 (247)
357 CHL00194 ycf39 Ycf39; Provisio 89.3 1.1 2.4E-05 40.3 6.6 43 204-247 2-45 (317)
358 COG0569 TrkA K+ transport syst 89.2 2.5 5.5E-05 36.4 8.4 44 204-248 2-47 (225)
359 TIGR01138 cysM cysteine syntha 89.2 5.5 0.00012 35.6 10.9 59 194-252 51-111 (290)
360 KOG1208 Dehydrogenases with di 89.2 1.1 2.3E-05 40.8 6.3 43 200-243 33-76 (314)
361 PRK06035 3-hydroxyacyl-CoA deh 89.1 1.1 2.4E-05 39.9 6.4 38 203-241 4-41 (291)
362 PRK05557 fabG 3-ketoacyl-(acyl 89.0 2.7 5.9E-05 35.6 8.5 35 201-236 4-39 (248)
363 PRK07502 cyclohexadienyl dehyd 88.9 1.2 2.6E-05 40.1 6.4 45 203-247 7-52 (307)
364 PRK14192 bifunctional 5,10-met 88.9 3.2 7E-05 37.1 9.0 55 199-255 156-211 (283)
365 PRK12745 3-ketoacyl-(acyl-carr 88.8 2.5 5.5E-05 36.2 8.2 33 203-236 3-36 (256)
366 COG1086 Predicted nucleoside-d 88.7 2.4 5.3E-05 41.3 8.5 79 198-278 246-331 (588)
367 PRK07775 short chain dehydroge 88.7 1.4 3E-05 38.7 6.6 39 201-240 9-48 (274)
368 PRK06523 short chain dehydroge 88.7 0.86 1.9E-05 39.4 5.2 37 200-237 7-44 (260)
369 COG0686 Ald Alanine dehydrogen 88.7 0.71 1.5E-05 41.7 4.6 44 203-247 169-213 (371)
370 PLN02565 cysteine synthase 88.7 5.3 0.00012 36.4 10.5 59 194-252 58-119 (322)
371 PRK09260 3-hydroxybutyryl-CoA 88.6 1.2 2.6E-05 39.7 6.1 40 203-243 2-41 (288)
372 PRK12814 putative NADPH-depend 88.6 1.3 2.9E-05 44.3 7.1 53 200-253 191-264 (652)
373 PF03721 UDPG_MGDP_dh_N: UDP-g 88.6 0.98 2.1E-05 37.7 5.2 58 204-269 2-59 (185)
374 PRK07424 bifunctional sterol d 88.4 1.2 2.7E-05 41.9 6.3 39 201-240 177-216 (406)
375 PRK11823 DNA repair protein Ra 88.4 3.7 8E-05 39.2 9.6 79 197-279 75-163 (446)
376 PLN02823 spermine synthase 88.4 2.1 4.5E-05 39.3 7.6 43 201-244 103-145 (336)
377 PLN02657 3,8-divinyl protochlo 88.4 3.2 6.8E-05 38.8 9.1 40 198-238 56-96 (390)
378 PF01210 NAD_Gly3P_dh_N: NAD-d 88.4 1.6 3.4E-05 35.3 6.2 40 204-244 1-40 (157)
379 COG0654 UbiH 2-polyprenyl-6-me 88.3 0.97 2.1E-05 42.0 5.6 44 203-247 3-60 (387)
380 PRK06522 2-dehydropantoate 2-r 88.3 1.4 3E-05 39.2 6.5 43 204-247 2-44 (304)
381 TIGR02964 xanthine_xdhC xanthi 88.2 1 2.3E-05 39.4 5.4 39 198-237 96-134 (246)
382 KOG2304 3-hydroxyacyl-CoA dehy 88.2 0.95 2.1E-05 39.1 4.9 46 198-244 7-52 (298)
383 PRK08278 short chain dehydroge 88.2 2.6 5.7E-05 36.9 8.1 36 201-237 5-41 (273)
384 TIGR01136 cysKM cysteine synth 88.2 8.4 0.00018 34.5 11.4 59 195-253 51-111 (299)
385 TIGR01289 LPOR light-dependent 88.2 1.6 3.4E-05 39.4 6.7 40 202-242 3-44 (314)
386 PRK13403 ketol-acid reductoiso 88.1 1.4 3.1E-05 40.1 6.3 47 200-247 14-60 (335)
387 PRK13984 putative oxidoreducta 88.1 1.6 3.5E-05 43.2 7.3 54 199-253 280-354 (604)
388 PRK14982 acyl-ACP reductase; P 88.1 1.5 3.2E-05 40.3 6.5 45 199-243 152-198 (340)
389 PRK01390 murD UDP-N-acetylmura 88.0 1.3 2.9E-05 42.1 6.5 46 201-247 8-53 (460)
390 PRK03562 glutathione-regulated 87.9 1.5 3.2E-05 43.8 6.8 48 202-250 400-447 (621)
391 PRK05855 short chain dehydroge 87.9 2.3 4.9E-05 41.2 8.1 41 201-242 314-355 (582)
392 PRK07370 enoyl-(acyl carrier p 87.9 2.4 5.1E-05 36.9 7.5 33 201-234 5-40 (258)
393 TIGR02415 23BDH acetoin reduct 87.9 1.6 3.4E-05 37.5 6.3 37 203-240 1-38 (254)
394 PRK07985 oxidoreductase; Provi 87.9 2.3 5E-05 37.9 7.6 35 200-235 47-82 (294)
395 PF13478 XdhC_C: XdhC Rossmann 87.9 0.49 1.1E-05 37.5 2.8 33 205-238 1-33 (136)
396 PLN02986 cinnamyl-alcohol dehy 87.9 1.2 2.7E-05 39.9 5.9 37 201-238 4-41 (322)
397 cd05191 NAD_bind_amino_acid_DH 87.9 2.6 5.7E-05 30.2 6.5 35 200-234 21-55 (86)
398 PLN02896 cinnamyl-alcohol dehy 87.8 1.6 3.4E-05 39.9 6.6 39 200-239 8-47 (353)
399 PLN02686 cinnamoyl-CoA reducta 87.8 1.5 3.2E-05 40.5 6.5 44 199-243 50-94 (367)
400 PRK06141 ornithine cyclodeamin 87.8 2.5 5.4E-05 38.3 7.8 46 198-243 121-167 (314)
401 PRK09135 pteridine reductase; 87.8 1.8 4E-05 36.8 6.7 34 201-235 5-39 (249)
402 PLN02583 cinnamoyl-CoA reducta 87.8 1.4 3.1E-05 39.2 6.2 35 200-235 4-39 (297)
403 PRK14175 bifunctional 5,10-met 87.8 4.2 9.1E-05 36.4 9.0 71 181-254 137-209 (286)
404 TIGR02632 RhaD_aldol-ADH rhamn 87.7 2.3 4.9E-05 42.8 8.1 41 201-242 413-454 (676)
405 PRK07340 ornithine cyclodeamin 87.7 3.5 7.7E-05 37.2 8.7 45 199-243 122-167 (304)
406 PRK03659 glutathione-regulated 87.7 1.5 3.3E-05 43.5 6.7 47 203-250 401-447 (601)
407 PRK00141 murD UDP-N-acetylmura 87.7 2.2 4.8E-05 40.9 7.8 50 198-248 11-61 (473)
408 PRK07417 arogenate dehydrogena 87.6 1.6 3.4E-05 38.8 6.3 43 204-247 2-44 (279)
409 PLN02556 cysteine synthase/L-3 87.6 7.5 0.00016 36.1 10.9 58 195-252 103-163 (368)
410 PRK08293 3-hydroxybutyryl-CoA 87.6 1.6 3.5E-05 38.9 6.4 39 203-242 4-42 (287)
411 PRK01581 speE spermidine synth 87.5 3.4 7.4E-05 38.3 8.5 45 199-244 148-192 (374)
412 PLN03139 formate dehydrogenase 87.5 1.4 3E-05 41.3 6.0 45 201-246 198-242 (386)
413 PRK05650 short chain dehydroge 87.5 1.6 3.5E-05 38.1 6.2 38 203-241 1-39 (270)
414 PRK08416 7-alpha-hydroxysteroi 87.5 1.6 3.5E-05 37.8 6.2 39 200-239 6-46 (260)
415 PF03446 NAD_binding_2: NAD bi 87.5 2.1 4.7E-05 34.6 6.5 44 203-247 2-45 (163)
416 PRK06924 short chain dehydroge 87.4 3.2 6.8E-05 35.6 8.0 39 203-242 2-42 (251)
417 PRK12810 gltD glutamate syntha 87.3 2.3 5E-05 40.8 7.6 35 200-235 141-175 (471)
418 TIGR01139 cysK cysteine syntha 87.2 7.9 0.00017 34.6 10.6 60 195-254 50-111 (298)
419 PF01494 FAD_binding_3: FAD bi 87.2 0.99 2.2E-05 40.5 4.8 32 204-236 3-34 (356)
420 PRK05599 hypothetical protein; 87.1 3.7 7.9E-05 35.4 8.2 38 203-242 1-39 (246)
421 PRK08618 ornithine cyclodeamin 87.1 3.1 6.8E-05 37.8 8.1 46 198-243 123-169 (325)
422 PF13241 NAD_binding_7: Putati 87.0 0.76 1.6E-05 34.4 3.3 35 201-236 6-40 (103)
423 PRK06171 sorbitol-6-phosphate 87.0 1.2 2.6E-05 38.7 5.1 37 201-238 8-45 (266)
424 PRK07201 short chain dehydroge 87.0 2.4 5.2E-05 42.1 7.8 40 202-242 371-411 (657)
425 KOG1207 Diacetyl reductase/L-x 87.0 2 4.3E-05 35.7 5.9 44 201-245 6-50 (245)
426 TIGR02622 CDP_4_6_dhtase CDP-g 86.9 1.5 3.2E-05 40.0 5.9 37 201-238 3-40 (349)
427 PRK12935 acetoacetyl-CoA reduc 86.9 3.4 7.5E-05 35.2 7.9 33 201-234 5-38 (247)
428 PRK07066 3-hydroxybutyryl-CoA 86.9 1.9 4.1E-05 39.3 6.4 38 203-241 8-45 (321)
429 PRK07574 formate dehydrogenase 86.8 1.7 3.6E-05 40.7 6.2 35 201-236 191-225 (385)
430 PRK12746 short chain dehydroge 86.8 1.8 3.9E-05 37.1 6.1 38 201-239 5-44 (254)
431 COG0334 GdhA Glutamate dehydro 86.8 4.1 8.9E-05 38.2 8.5 59 176-237 182-241 (411)
432 PRK05714 2-octaprenyl-3-methyl 86.7 1.4 3.1E-05 41.0 5.8 32 204-236 4-35 (405)
433 COG0569 TrkA K+ transport syst 86.6 6.7 0.00015 33.7 9.4 77 193-273 58-137 (225)
434 KOG4169 15-hydroxyprostaglandi 86.6 2.2 4.9E-05 36.9 6.2 44 202-246 5-49 (261)
435 PF13450 NAD_binding_8: NAD(P) 86.6 1.4 3E-05 30.3 4.2 29 207-236 1-29 (68)
436 PRK12747 short chain dehydroge 86.6 2.2 4.8E-05 36.7 6.5 38 201-239 3-42 (252)
437 PRK09310 aroDE bifunctional 3- 86.6 3.6 7.8E-05 39.6 8.5 41 201-242 331-371 (477)
438 TIGR00438 rrmJ cell division p 86.6 4.9 0.00011 33.2 8.4 76 196-278 27-104 (188)
439 PF00899 ThiF: ThiF family; I 86.6 1.6 3.5E-05 34.1 5.2 34 202-235 2-35 (135)
440 PRK06849 hypothetical protein; 86.5 3.6 7.8E-05 38.3 8.3 72 201-275 3-79 (389)
441 PLN02928 oxidoreductase family 86.5 1.5 3.2E-05 40.5 5.6 34 201-235 158-191 (347)
442 PF03807 F420_oxidored: NADP o 86.4 2.9 6.3E-05 30.3 6.2 43 204-247 1-48 (96)
443 PF09445 Methyltransf_15: RNA 86.4 0.65 1.4E-05 38.1 2.8 70 205-279 2-76 (163)
444 PRK08220 2,3-dihydroxybenzoate 86.4 2.9 6.4E-05 35.7 7.2 35 201-236 7-42 (252)
445 TIGR02355 moeB molybdopterin s 86.2 1.5 3.2E-05 38.3 5.2 35 202-236 24-58 (240)
446 PLN02989 cinnamyl-alcohol dehy 86.1 1.7 3.7E-05 39.0 5.8 37 201-238 4-41 (325)
447 PRK09496 trkA potassium transp 86.1 4.6 0.0001 38.2 8.9 45 200-245 229-273 (453)
448 PRK15181 Vi polysaccharide bio 86.1 1.5 3.3E-05 40.0 5.5 47 188-236 2-49 (348)
449 TIGR01317 GOGAT_sm_gam glutama 86.1 2.6 5.5E-05 40.7 7.2 35 200-235 141-175 (485)
450 PRK09730 putative NAD(P)-bindi 86.1 3.9 8.4E-05 34.7 7.8 36 203-239 2-39 (247)
451 PF01135 PCMT: Protein-L-isoas 86.0 3.2 6.9E-05 35.4 7.0 59 182-243 55-114 (209)
452 TIGR01829 AcAcCoA_reduct aceto 86.0 2.3 5.1E-05 36.0 6.3 35 203-238 1-37 (242)
453 PRK14967 putative methyltransf 86.0 3.7 8E-05 35.1 7.5 48 195-244 30-77 (223)
454 PLN02778 3,5-epimerase/4-reduc 86.0 3 6.4E-05 37.4 7.2 53 201-254 8-65 (298)
455 TIGR02356 adenyl_thiF thiazole 86.0 1.6 3.5E-05 36.9 5.2 35 201-235 20-54 (202)
456 PRK06719 precorrin-2 dehydroge 85.8 2.1 4.5E-05 34.8 5.5 32 201-233 12-43 (157)
457 COG2242 CobL Precorrin-6B meth 85.8 3.3 7.1E-05 34.6 6.7 53 195-248 28-84 (187)
458 PRK06753 hypothetical protein; 85.7 1.2 2.7E-05 40.8 4.7 32 204-236 2-33 (373)
459 PRK08328 hypothetical protein; 85.7 1.6 3.5E-05 37.8 5.1 34 202-235 27-60 (231)
460 smart00822 PKS_KR This enzymat 85.7 7.8 0.00017 30.5 8.9 35 203-237 1-36 (180)
461 PRK07889 enoyl-(acyl carrier p 85.7 4.5 9.7E-05 35.1 8.0 35 200-235 5-42 (256)
462 PRK06077 fabG 3-ketoacyl-(acyl 85.6 5.8 0.00013 33.8 8.6 32 201-233 5-37 (252)
463 PRK07530 3-hydroxybutyryl-CoA 85.6 2.4 5.3E-05 37.8 6.4 39 203-242 5-43 (292)
464 PRK12921 2-dehydropantoate 2-r 85.6 2.1 4.5E-05 38.2 6.0 42 204-247 2-43 (305)
465 PRK06130 3-hydroxybutyryl-CoA 85.5 2.4 5.1E-05 38.2 6.4 40 203-243 5-44 (311)
466 PRK13243 glyoxylate reductase; 85.5 2.4 5.2E-05 38.8 6.4 36 201-237 149-184 (333)
467 PRK08163 salicylate hydroxylas 85.4 1.4 2.9E-05 40.9 4.9 34 202-236 4-37 (396)
468 PRK06129 3-hydroxyacyl-CoA deh 85.4 2.3 5E-05 38.3 6.2 38 203-241 3-40 (308)
469 PRK06847 hypothetical protein; 85.4 1.4 3.1E-05 40.4 5.0 34 202-236 4-37 (375)
470 COG1052 LdhA Lactate dehydroge 85.4 2.2 4.8E-05 38.9 6.1 36 201-237 145-180 (324)
471 PRK06947 glucose-1-dehydrogena 85.4 3.8 8.2E-05 35.0 7.4 37 203-240 3-41 (248)
472 TIGR01470 cysG_Nterm siroheme 85.4 2 4.3E-05 36.5 5.5 35 201-236 8-42 (205)
473 PRK08936 glucose-1-dehydrogena 85.4 2.6 5.6E-05 36.5 6.4 35 200-235 5-40 (261)
474 PLN02545 3-hydroxybutyryl-CoA 85.3 2.5 5.5E-05 37.7 6.4 37 203-240 5-41 (295)
475 PRK12859 3-ketoacyl-(acyl-carr 85.3 5.2 0.00011 34.6 8.3 33 200-233 4-39 (256)
476 PRK09134 short chain dehydroge 85.3 2.8 6.1E-05 36.2 6.6 38 201-239 8-47 (258)
477 PLN02650 dihydroflavonol-4-red 85.3 2 4.2E-05 39.2 5.8 39 201-240 4-43 (351)
478 PRK05708 2-dehydropantoate 2-r 85.2 2 4.3E-05 38.7 5.7 41 203-244 3-43 (305)
479 PRK04457 spermidine synthase; 85.2 5.3 0.00011 35.2 8.3 44 200-244 65-108 (262)
480 PF02719 Polysacc_synt_2: Poly 85.2 1.9 4.1E-05 38.8 5.4 73 205-278 1-83 (293)
481 KOG1502 Flavonol reductase/cin 85.2 3.2 7E-05 37.8 6.9 45 201-246 5-53 (327)
482 PF13738 Pyr_redox_3: Pyridine 85.1 1.2 2.6E-05 36.9 4.0 32 206-237 1-32 (203)
483 COG3380 Predicted NAD/FAD-depe 85.1 2.2 4.7E-05 38.0 5.5 69 203-276 2-79 (331)
484 PRK13942 protein-L-isoaspartat 85.0 6.4 0.00014 33.4 8.5 51 193-244 68-119 (212)
485 PLN02730 enoyl-[acyl-carrier-p 85.0 2 4.3E-05 38.8 5.6 38 200-239 7-47 (303)
486 PRK09496 trkA potassium transp 85.0 2.6 5.7E-05 39.8 6.7 44 204-248 2-46 (453)
487 PRK07819 3-hydroxybutyryl-CoA 85.0 2.6 5.7E-05 37.6 6.3 38 203-241 6-43 (286)
488 PRK00676 hemA glutamyl-tRNA re 84.9 3.5 7.6E-05 37.8 7.1 43 196-238 168-210 (338)
489 PRK08410 2-hydroxyacid dehydro 84.9 1.9 4E-05 39.1 5.4 34 201-235 144-177 (311)
490 PF05368 NmrA: NmrA-like famil 84.9 8 0.00017 32.8 9.1 45 205-250 1-48 (233)
491 PRK07023 short chain dehydroge 84.8 3.8 8.2E-05 35.0 7.1 34 204-238 3-37 (243)
492 PRK00421 murC UDP-N-acetylmura 84.8 2.6 5.7E-05 40.2 6.6 50 198-248 3-54 (461)
493 PLN02172 flavin-containing mon 84.8 1.5 3.2E-05 42.1 4.9 35 201-236 9-43 (461)
494 PLN02662 cinnamyl-alcohol dehy 84.8 2.1 4.6E-05 38.2 5.7 37 201-238 3-40 (322)
495 PRK08309 short chain dehydroge 84.5 6.9 0.00015 32.3 8.2 39 204-243 2-40 (177)
496 cd01562 Thr-dehyd Threonine de 84.4 7.7 0.00017 34.6 9.2 52 202-253 65-118 (304)
497 TIGR02354 thiF_fam2 thiamine b 84.3 2.2 4.8E-05 36.1 5.2 34 202-235 21-54 (200)
498 PLN00011 cysteine synthase 84.3 12 0.00026 34.0 10.4 61 193-253 59-122 (323)
499 PRK05690 molybdopterin biosynt 84.3 2.3 4.9E-05 37.2 5.4 34 202-235 32-65 (245)
500 PRK07236 hypothetical protein; 84.3 1.7 3.7E-05 40.3 4.9 34 202-236 6-39 (386)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.7e-52 Score=374.67 Aligned_cols=228 Identities=32% Similarity=0.483 Sum_probs=215.2
Q ss_pred cceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 023561 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 14 ~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|++|||+++.++++|++++|++.|+|+++||+|||+++|+|++|++.+.|.++...+|+++|||.+|+|+++|++|+.|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCEEEe-cCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCC
Q 023561 94 EGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (280)
Q Consensus 94 ~Gd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 172 (280)
+||||.+ +...+|++|.+|++|++++|++... .|++.+| +|+||+++++.+++++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCC
Confidence 9999988 8889999999999999999999775 6777777 999999999999999999
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
++++++||.+.|++.|+|+++ +..++++|++|+|.|.|++|++++|+|+++|+ +|++++++++|+++++++|+++++|
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999976 55899999999999999999999999999997 9999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHh
Q 023561 253 SKNCGDKSVSQVLLSI 268 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~ 268 (280)
..+ +++.+.+++.
T Consensus 217 ~~~---~~~~~~~~~~ 229 (339)
T COG1064 217 SSD---SDALEAVKEI 229 (339)
T ss_pred cCC---chhhHHhHhh
Confidence 766 6777777764
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.4e-50 Score=356.50 Aligned_cols=258 Identities=44% Similarity=0.722 Sum_probs=248.2
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
+++||+++.++++||+++|+.+++|+++|||||+.++|+|++|...++|..|.. +|.++|||++|+|+++|++|.++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 468999999999999999999999999999999999999999999999999986 9999999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|+..+..+|++|.+|.+|.+++|...+.++..|...+|+.++. .++++..|+.+.++|++|.+++..++++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999999999999999999999999999998888999999999998 899999999999999999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
+++.++++.|...|.+.++.+.+++++|++|.|+|.|++|++++|-|+..|+.+||++|.+++|++++++||+++++|+.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCc-cHHHHHHHhcCCCceEEE
Q 023561 255 NCGDK-SVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 255 ~~~~~-~~~~~v~~~~~gg~~~v~ 277 (280)
+ . +..+.+.++|++|.+.++
T Consensus 239 ~---~~~vv~~i~~~T~gG~d~~~ 259 (366)
T COG1062 239 E---VDDVVEAIVELTDGGADYAF 259 (366)
T ss_pred h---hhhHHHHHHHhcCCCCCEEE
Confidence 7 4 699999999998876654
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-50 Score=349.74 Aligned_cols=265 Identities=52% Similarity=0.876 Sum_probs=250.3
Q ss_pred CCCcceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCC
Q 023561 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 11 ~~~~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
.++.++|||++..++++||.++|+.+++|+..||+||+.++++|++|...|+|..+...+|.++|||++|+|+.+|++|.
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 45778999999999999999999999999999999999999999999999999988788999999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCC-CCCCCccccccCCceeecccccceeeeeEEeecccEEE
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (280)
++++||+|+......|+.|++|+++..|+|.+.+.+.+.+. ..+|..||. .+|+.+.||.+..+|+||.+++...+.+
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEe
Confidence 99999999999999999999999999999999988864444 459999999 8999999999999999999999999999
Q ss_pred cCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 170 iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
|++..+++.++++.|.++|+|.|+++.+++++|+++.|+|.|++|+++++-+|+.|+.++|++|.+++|.+.++++|+++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 250 FVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 250 vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
++|+.+ ..+...+.++|.|+||+|.-+
T Consensus 241 ~iNp~d-~~~~i~evi~EmTdgGvDysf 267 (375)
T KOG0022|consen 241 FINPKD-LKKPIQEVIIEMTDGGVDYSF 267 (375)
T ss_pred ecChhh-ccccHHHHHHHHhcCCceEEE
Confidence 999985 234788999999999986544
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-46 Score=327.37 Aligned_cols=247 Identities=28% Similarity=0.417 Sum_probs=223.2
Q ss_pred CCcceeeeeeecCCCC--CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCC
Q 023561 12 GKPIQCRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (280)
Q Consensus 12 ~~~~~~~a~~~~~~g~--~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v 89 (280)
..+.++++|.+..+++ ++++.+++.|+|+++||+||++++|||++|++.|.|.++...+|.++|||.+|+|+++|++|
T Consensus 5 ~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V 84 (360)
T KOG0023|consen 5 SIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNV 84 (360)
T ss_pred cCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCc
Confidence 3567899999998888 46679999999999999999999999999999999999988999999999999999999999
Q ss_pred CCCCCCCEE-EecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEE
Q 023561 90 DGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (280)
Q Consensus 90 ~~~~~Gd~V-~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (280)
+.|++||+| +-....+|.+|.+|.++++++|++...+ ..|...|| ..+.|+|++|+++++.+++
T Consensus 85 ~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DG--------------t~~~ggf~~~~~v~~~~a~ 149 (360)
T KOG0023|consen 85 TGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDG--------------TITQGGFQEYAVVDEVFAI 149 (360)
T ss_pred ccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCC--------------CCccCccceeEEEeeeeEE
Confidence 999999999 6677789999999999999999985544 57888888 4445699999999999999
Q ss_pred EcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHHcCC
Q 023561 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGV 247 (280)
Q Consensus 169 ~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~Ga 247 (280)
+||++++.++||.+.|+..|+|.+| ...++.+|+++.|.|+|++|++++|+||+||. +|+++++++ +|.+.++.+||
T Consensus 150 kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGA 227 (360)
T KOG0023|consen 150 KIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGA 227 (360)
T ss_pred ECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCc
Confidence 9999999999999999999999965 66788899999999997799999999999999 899999887 67777778999
Q ss_pred cEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 248 TEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 248 ~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+.+++..+ ++++.+.+++.++++++.+.
T Consensus 228 d~fv~~~~--d~d~~~~~~~~~dg~~~~v~ 255 (360)
T KOG0023|consen 228 DVFVDSTE--DPDIMKAIMKTTDGGIDTVS 255 (360)
T ss_pred ceeEEecC--CHHHHHHHHHhhcCcceeee
Confidence 99998773 48999999999999887665
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-44 Score=316.27 Aligned_cols=233 Identities=28% Similarity=0.445 Sum_probs=206.5
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCC-CCCeEEEEeeeeecChhhhhhhhcCCCC---CCCCcccccceeEEEEEeCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~-~~~eVlIkv~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
.+|+|+++.++++ ++++++|.|++ .|+||+|++.++|||++|++.|...... .+.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 5689999999998 99999999998 8999999999999999999999876543 35799999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEc
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 170 (280)
++++||||++-|..+|+.|++|++|++|+||...+. .-...+| ++++|++.++++++++
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~--atpp~~G-------------------~la~y~~~~~dfc~KL 140 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC--ATPPVDG-------------------TLAEYYVHPADFCYKL 140 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccc--cCCCcCC-------------------ceEEEEEechHheeeC
Confidence 999999999999999999999999999999998873 1223456 9999999999999999
Q ss_pred CCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 171 P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
||++|++++|++. +++++|+| .+++++++|.+|||+|+|++|+++...||++|+.+|++++..+.|+++++++|++.+
T Consensus 141 Pd~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 141 PDNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred CCCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 9999999999988 89999995 688999999999999999999999999999999999999999999999999999988
Q ss_pred EcCCCCC-CccHHHHHHHhcCC
Q 023561 251 VNSKNCG-DKSVSQVLLSIYDL 271 (280)
Q Consensus 251 i~~~~~~-~~~~~~~v~~~~~g 271 (280)
.+..... .+++.+.+....+.
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~ 240 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGK 240 (354)
T ss_pred eeccccccHHHHHHHHHhhccc
Confidence 7655411 13344444444443
No 6
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.4e-41 Score=314.14 Aligned_cols=259 Identities=46% Similarity=0.735 Sum_probs=217.2
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++...+++++++++|.|+|.++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|++++.|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 78999988887899999999999999999999999999999999988765556799999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
||++.+..+|++|.+|+.|..++|++.......|+..+|+.++.. .|....+..+.|+|+||+++|.++++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSK-DGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCcccccc-CCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999988899999999999999999985432223443333222210 1111111222469999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~ 256 (280)
++++++.+++.|+|+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++|+.+
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~- 239 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND- 239 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-
Confidence 9999999999999998878889999999999999999999999999999977999999999999999999999998763
Q ss_pred CCccHHHHHHHhcCCCceEEE
Q 023561 257 GDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 257 ~~~~~~~~v~~~~~gg~~~v~ 277 (280)
.++++.+.+++++++|+|.++
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vi 260 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSF 260 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEE
Confidence 124567778888877664443
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.5e-41 Score=312.04 Aligned_cols=265 Identities=52% Similarity=0.889 Sum_probs=217.1
Q ss_pred CCcceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCC
Q 023561 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 12 ~~~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
+++++|||+++.++++++++++++.|.|+++||+||++++|||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence 46678999999999887999999999999999999999999999999999887532 35789999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCC-CCCCCCcccccc-CCceeecccccceeeeeEEeecccEE
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDL-RGETIHHFVSVSSFSEYTVLDIAHVV 168 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g-~~~~G~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (280)
.|++||+|++.+..+|+.|.+|+.+..+.|++.......+ ...+|..+++.. .+....++...|+|+||++++..+++
T Consensus 86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 9999999999999999999999999999999865321000 000110000000 00001112224699999999999999
Q ss_pred EcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 169 ~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
++|+++++++++.+.+++.|+|.++++..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 245 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGIT 245 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCc
Confidence 99999999999999999999999887888999999999999999999999999999997799999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 249 EFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 249 ~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++|+++ .++++.+.+++++++++|.+.
T Consensus 246 ~~i~~~~-~~~~~~~~v~~~~~~g~dvvi 273 (381)
T PLN02740 246 DFINPKD-SDKPVHERIREMTGGGVDYSF 273 (381)
T ss_pred EEEeccc-ccchHHHHHHHHhCCCCCEEE
Confidence 9998775 113477888888876664443
No 8
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.2e-40 Score=307.69 Aligned_cols=261 Identities=48% Similarity=0.801 Sum_probs=218.4
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
.+|||+++.+.+++++++++|.|.|+++||+||++++|+|++|++++.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 36899999888888999999999999999999999999999999999887665567999999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|++.+..+|+.|.+|+.++++.|++.....+.|...+|..++.. +|....++.+.|+|+||+.++...++++|+++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSC-KGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCcccccc-CCcccccccccccceeEEEEchhceEeCCCCC
Confidence 99999988899999999999999999875432122333333111100 01111112234699999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
++.+++++.+++.|+|+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~ 239 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 99999999999999999887888999999999999999999999999999997799999999999999999999999987
Q ss_pred CCCCccHHHHHHHhcCCCceEEE
Q 023561 255 NCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+ .++++.+.+++++++|+|.++
T Consensus 240 ~-~~~~~~~~v~~~~~~g~d~vi 261 (368)
T cd08300 240 D-HDKPIQQVLVEMTDGGVDYTF 261 (368)
T ss_pred c-cchHHHHHHHHHhCCCCcEEE
Confidence 5 112578888888877765544
No 9
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.9e-40 Score=304.26 Aligned_cols=261 Identities=53% Similarity=0.911 Sum_probs=216.0
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
++|||+++.++++++++++++.|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 37999999988888999999999999999999999999999999999887655567999999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCC-CCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~-~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
||+|++.+..+|++|.+|+.+.++.|++.......|... ++..++. ..|....++...|+|+||++++..+++++|++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 999999999999999999999999999864321112211 0000000 00111111223468999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+++++++++.+.+.|+|.++++..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~ 239 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNP 239 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcc
Confidence 99999999999999999988888899999999999999999999999999999779999999999999999999999987
Q ss_pred CCCCCccHHHHHHHhcCCCceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
.+ .++++.+.++++++++++.+.
T Consensus 240 ~~-~~~~~~~~v~~~~~~~~d~vi 262 (369)
T cd08301 240 KD-HDKPVQEVIAEMTGGGVDYSF 262 (369)
T ss_pred cc-cchhHHHHHHHHhCCCCCEEE
Confidence 64 113567778888776664443
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.1e-40 Score=306.33 Aligned_cols=256 Identities=36% Similarity=0.571 Sum_probs=214.3
Q ss_pred eeeeeecCCCC--------CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCC
Q 023561 17 CRAAIATAPGE--------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (280)
Q Consensus 17 ~~a~~~~~~g~--------~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~ 88 (280)
|||+++.++|. .+++++++.|+|+++||+|||.+++||++|++++.|..+. .+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR-PLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC-CCCccCCccceeEEEEeCCC
Confidence 78999998763 4899999999999999999999999999999999887543 46899999999999999999
Q ss_pred CCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEE
Q 023561 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (280)
Q Consensus 89 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (280)
+.+|++||+|++.+..+|++|..|+.|.+++|++.......|...+|...+. .++....+..+.|+|+||+.++..+++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLR-LRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCccccc-ccCcccccccCcccceeeEEecccceE
Confidence 9999999999988888999999999999999998654322332222210000 000001111123599999999999999
Q ss_pred EcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 169 ~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
++|+++++++|+.+.++..|||.++.+..++++|++|+|.|+|++|++++|+|+.+|++.|++++.+++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999887888999999999999999999999999999997799999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 249 EFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 249 ~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++++++ +++.+.+++++++++|.++
T Consensus 239 ~~i~~~~---~~~~~~i~~~~~~g~d~vi 264 (371)
T cd08281 239 ATVNAGD---PNAVEQVRELTGGGVDYAF 264 (371)
T ss_pred eEeCCCc---hhHHHHHHHHhCCCCCEEE
Confidence 9999877 7888889988877765444
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=8.5e-40 Score=300.90 Aligned_cols=248 Identities=33% Similarity=0.548 Sum_probs=213.3
Q ss_pred eeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 16 ~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
||||+++.++++++++++++.|+|+++||+|||.++|+|++|++.+.|..+. .+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND-EFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc-cCCcccccceEEEEEEeCCCCcccCCC
Confidence 6999999999988999999999999999999999999999999999886542 468999999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCc-CCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
|+|++.+..+|+.|.+|..|+.++|+...... ..+. .+| .......+.|+|+||+.++..+++++|+++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~ 149 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TELSPALGIGAFAEKTLVHAGQCTKVDPAA 149 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------cccccccccccccceEEEehhheEECCCCC
Confidence 99999999999999999999999998632210 0000 011 000001123599999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
++++|+.+.+.+.++|.++.+...+++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++++++++
T Consensus 150 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~ 229 (358)
T TIGR03451 150 DPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS 229 (358)
T ss_pred ChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC
Confidence 99999999999999998777788899999999999999999999999999996799999999999999999999999987
Q ss_pred CCCCccHHHHHHHhcCC-CceEEE
Q 023561 255 NCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+ +++.+.+++++++ |+|.+.
T Consensus 230 ~---~~~~~~i~~~~~~~g~d~vi 250 (358)
T TIGR03451 230 G---TDPVEAIRALTGGFGADVVI 250 (358)
T ss_pred C---cCHHHHHHHHhCCCCCCEEE
Confidence 7 7888899999887 775444
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.7e-39 Score=296.16 Aligned_cols=234 Identities=28% Similarity=0.392 Sum_probs=208.0
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++.+++. +++++++.|.|+++||+||+.++++|++|++.+.+.... ...|.++|||++|+|+++|+++++|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 68999988765 999999999999999999999999999999988765432 2358899999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
|+|++.+...|+.|.+|+.|+++.|++... .+|...+| +|+||++++..+++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999987653 24555556 999999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
+++|+++.+++.|+|+++ +...+++|++|||+|+|++|++++|+|+.+|++.|++++++++|+++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999975 5678899999999999999999999999999955999999999999999999999999876
Q ss_pred CCCccHHHHHHHhcCC-CceEEE
Q 023561 256 CGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 256 ~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++ .+.+++++++ ++|.+.
T Consensus 218 ---~~-~~~~~~~~~~~~~d~vi 236 (339)
T cd08239 218 ---DD-VQEIRELTSGAGADVAI 236 (339)
T ss_pred ---ch-HHHHHHHhCCCCCCEEE
Confidence 55 6778888877 775554
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.4e-39 Score=298.48 Aligned_cols=260 Identities=46% Similarity=0.824 Sum_probs=210.8
Q ss_pred CCcceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023561 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (280)
Q Consensus 12 ~~~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 91 (280)
+...+|||+++.++++.+++++++.|+|+++||+|||.++|+|++|++.+.+.. .+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~ 84 (378)
T PLN02827 8 PNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTE 84 (378)
T ss_pred cccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcc
Confidence 344679999999888779999999999999999999999999999999887652 35889999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCC-CCCccccccCCceeecccccceeeeeEEeecccEEEc
Q 023561 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (280)
Q Consensus 92 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~-~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 170 (280)
|++||+|++.+..+|++|.+|+.|.+++|++.... ..|... ++..+|. ..|....++...|+|+||+.++...++++
T Consensus 85 ~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~i 162 (378)
T PLN02827 85 FEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
T ss_pred cCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCcccccccccccceeeEEechhheEEC
Confidence 99999999998899999999999999999874321 011100 0000000 00000000012359999999999999999
Q ss_pred CCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 171 P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
|+++++++++.+.+.+.++|.++++..++++|++|||+|+|++|++++|+|+++|++.|++++.+++|+++++++|++++
T Consensus 163 P~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~ 242 (378)
T PLN02827 163 DPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDF 242 (378)
T ss_pred CCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE
Confidence 99999999999988989999877777889999999999999999999999999999778899989999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 251 VNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 251 i~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++++ .++++.+.+++++++|+|.+.
T Consensus 243 i~~~~-~~~~~~~~v~~~~~~g~d~vi 268 (378)
T PLN02827 243 INPND-LSEPIQQVIKRMTGGGADYSF 268 (378)
T ss_pred Ecccc-cchHHHHHHHHHhCCCCCEEE
Confidence 98764 113677788888876765443
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.7e-38 Score=293.07 Aligned_cols=259 Identities=48% Similarity=0.846 Sum_probs=214.6
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
+++||+++.+.+++++++++|.|.|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4689999998887799999999999999999999999999999999988664 357899999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|++.+..+|++|.+|+.|.+++|++..+. ..|...+|.-++.. .|.-..++.+.|+|+||++++..+++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999988899999999999999999986542 11222222100000 00000011224699999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
++++++++.+++.|+|+++.+...+++|++|+|+|+|++|++++++|+.+|+++|++++++++|+++++++|++++++++
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999877888999999999999999999999999999997799999999999999999999999876
Q ss_pred CCCCccHHHHHHHhcCCCceEEE
Q 023561 255 NCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+ .+.++.+.+++++++++|.+.
T Consensus 238 ~-~~~~~~~~~~~~~~~g~d~vi 259 (365)
T cd08277 238 D-SDKPVSEVIREMTGGGVDYSF 259 (365)
T ss_pred c-ccchHHHHHHHHhCCCCCEEE
Confidence 5 113457778888776665443
No 15
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=6.8e-39 Score=291.08 Aligned_cols=212 Identities=27% Similarity=0.313 Sum_probs=189.8
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++.+++.+ ++++|+|.|.|+++||||||+++|||+.|..+++|. .+...+|.++|.|++|+|+++|++++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 688999888876 889999999999999999999999999999999997 33356899999999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+... . .+ .+ |+|+||+.+|+++++++|++
T Consensus 81 ~GdrV~~~~-~------------------------~~--~~-------------------G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-G------------------------VG--RD-------------------GGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-C------------------------CC--CC-------------------CcceeEEEecHHHceeCCCC
Confidence 999997542 0 00 23 39999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+|+++||++++++.|||+++....++++|++|||+|+ |++|++++|+||++|+ .++++..++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999997 9999999999999998 6666666777777999999999999
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEEe
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTISV 278 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~~ 278 (280)
|++ +++.+.++++++| |+|.|..
T Consensus 194 y~~---~~~~~~v~~~t~g~gvDvv~D 217 (326)
T COG0604 194 YRE---EDFVEQVRELTGGKGVDVVLD 217 (326)
T ss_pred CCc---ccHHHHHHHHcCCCCceEEEE
Confidence 998 7899999999999 8866653
No 16
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.9e-38 Score=295.46 Aligned_cols=241 Identities=26% Similarity=0.339 Sum_probs=197.3
Q ss_pred eeeeeeecCCCCCcEEEEeecCCCC-------CCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCC
Q 023561 16 QCRAAIATAPGEPLVIDEVIVDPPN-------SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (280)
Q Consensus 16 ~~~a~~~~~~g~~l~~~~~~~p~~~-------~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~ 88 (280)
-|||+++.++++ ++++++|.|+|+ ++||||||+++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 378999998887 999999999874 68999999999999999999988654 246899999999999999999
Q ss_pred CCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCc---CCCCCCCCCccccccCCceeecccccceeeeeEEeecc
Q 023561 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI---SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (280)
Q Consensus 89 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~---~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 165 (280)
+.+|++||||++.+...|+.|.+|+.|++++|++..... .+|+...| ...|+|+||+.+|..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG---------------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC---------------CCCCceEEEEEechh
Confidence 999999999999999999999999999999999753210 01211000 002499999999964
Q ss_pred --cEEEcCCCCCh----hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 023561 166 --HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF 239 (280)
Q Consensus 166 --~~~~iP~~ls~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~ 239 (280)
+++++|++++. .+++.+.+++.++|+++ ...++++|++|+|.|+|++|++++++|+.+|++.+++++.+++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998754 34667778999999965 567899999999988899999999999999997677778888999
Q ss_pred HHHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 240 EIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 240 ~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++++++|++.+++.++ .++.+.+.+++++ ++|.++
T Consensus 224 ~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvi 259 (393)
T TIGR02819 224 AQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAV 259 (393)
T ss_pred HHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEE
Confidence 9999999975443333 5677888888887 665443
No 17
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1e-38 Score=292.91 Aligned_cols=238 Identities=27% Similarity=0.348 Sum_probs=196.2
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR-ILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~-i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|++++++.+++..++++.+.|.+.++||+|||.++|||+||++.+.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 56777777666455888877778999999999999999999999999877655565 99999999999999 77889999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCc--CCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEE-cCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI--SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK-VDP 172 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~--~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-iP~ 172 (280)
|||++.+..+|+.|.+|+.|.+++|++..+.. .++...+| +|+||+.+|.++.+. +|+
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G-------------------~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG-------------------GFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC-------------------ceEEEEEeccccCeecCCC
Confidence 99999999999999999999999999654310 11111344 999999999755555 578
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCCcEEE
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV 251 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga~~vi 251 (280)
++ +.+++++..++++++++.......+++++|+|+|+|++|++++++++.+|+.+||+++.+++|++++++ .|++.++
T Consensus 141 ~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~ 219 (350)
T COG1063 141 GI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV 219 (350)
T ss_pred CC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence 88 455555566999998864555566666799999999999999999999999999999999999999999 7777777
Q ss_pred cCCCCCCccHHHHHHHhcCC-CceEEEe
Q 023561 252 NSKNCGDKSVSQVLLSIYDL-PLLTISV 278 (280)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~g-g~~~v~~ 278 (280)
+..+ ++....++++++| |+|.++.
T Consensus 220 ~~~~---~~~~~~~~~~t~g~g~D~vie 244 (350)
T COG1063 220 NPSE---DDAGAEILELTGGRGADVVIE 244 (350)
T ss_pred cCcc---ccHHHHHHHHhCCCCCCEEEE
Confidence 7665 4778888899999 8866653
No 18
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.2e-38 Score=288.07 Aligned_cols=214 Identities=23% Similarity=0.412 Sum_probs=186.8
Q ss_pred cceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhh-cCCC--CCCCCcccccceeEEEEEeCCCCC
Q 023561 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 14 ~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
..++||++++++++ +++++++.| +.++||||||.++|||++|++++. +... ...+|.++|||++|+|+++ +++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 45789999999888 999999987 689999999999999999999875 3322 1356999999999999999 788
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCC-----CCCCCccccccCCceeecccccceeeeeEEeecc
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-----PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-----~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 165 (280)
+|++||+|++.+..+|++|.+|+.|++++|++..+ +|. ..+| +|+||++++.+
T Consensus 78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~~~~~G-------------------~~aey~~v~~~ 135 (343)
T PRK09880 78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYFPHVDG-------------------GFTRYKVVDTA 135 (343)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccccCCCCC-------------------ceeeeEEechH
Confidence 99999999999999999999999999999998654 222 1234 99999999999
Q ss_pred cEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHc
Q 023561 166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (280)
Q Consensus 166 ~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 245 (280)
.++++|+++++++++. ..+++++|+++ ......+|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++
T Consensus 136 ~~~~~P~~l~~~~aa~-~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l 213 (343)
T PRK09880 136 QCIPYPEKADEKVMAF-AEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM 213 (343)
T ss_pred HeEECCCCCCHHHHHh-hcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc
Confidence 9999999999987664 45788999976 455667899999999999999999999999997899999999999999999
Q ss_pred CCcEEEcCCC
Q 023561 246 GVTEFVNSKN 255 (280)
Q Consensus 246 Ga~~vi~~~~ 255 (280)
|+++++|+++
T Consensus 214 Ga~~vi~~~~ 223 (343)
T PRK09880 214 GADKLVNPQN 223 (343)
T ss_pred CCcEEecCCc
Confidence 9999999876
No 19
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=4.9e-37 Score=284.26 Aligned_cols=264 Identities=44% Similarity=0.738 Sum_probs=216.8
Q ss_pred CCCcceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCC
Q 023561 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 11 ~~~~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
+++-.+|||+++.+++++++++++|.|+|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++
T Consensus 2 ~~~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 2 AGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred CcccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCc
Confidence 34557899999998887899999999999999999999999999999999988763 34688999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEc
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 170 (280)
.+++||+|++.+..+|++|.+|+.++++.|++.......|...++.-+++ -+|.+..++...|+|+||++++.++++++
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~e~~~v~~~~~~~l 159 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKI 159 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccccccCCCcccceEEecccceeeC
Confidence 99999999998889999999999999999998643110122111100000 01122223333469999999999999999
Q ss_pred CCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 171 P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
|+++++.+++++.+++.++|.++.+..++++|++|+|+|+|++|++++++|+.+|+++|++++++++|++.++++|++++
T Consensus 160 P~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~ 239 (373)
T cd08299 160 DAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATEC 239 (373)
T ss_pred CCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE
Confidence 99999999999999999999988888899999999999889999999999999999779999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 251 VNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 251 i~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++.+ ..+++.+.+.+++++++|.+.
T Consensus 240 i~~~~-~~~~~~~~v~~~~~~~~d~vl 265 (373)
T cd08299 240 INPQD-YKKPIQEVLTEMTDGGVDFSF 265 (373)
T ss_pred ecccc-cchhHHHHHHHHhCCCCeEEE
Confidence 98765 112367777777766664443
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.7e-37 Score=285.99 Aligned_cols=224 Identities=24% Similarity=0.349 Sum_probs=190.8
Q ss_pred CCcceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023561 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (280)
Q Consensus 12 ~~~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 91 (280)
.-+++++++.+.+..+++++.+++.|+|+++||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 34577888888887777999999999999999999999999999999999886554457899999999999999999999
Q ss_pred CCCCCEEEecCC-CCCCCChhhcCCCCCCCCCCCCCc----CCCCCCCCCccccccCCceeecccccceeeeeEEeeccc
Q 023561 92 VVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH 166 (280)
Q Consensus 92 ~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 166 (280)
|++||+|++.+. .+|++|.+|+.|.+++|++..+.. +.|...+| +|+||++++.+.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~ 148 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYG-------------------GYSDMIVVDQHF 148 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCC-------------------ccceEEEEchHH
Confidence 999999986554 579999999999999999864320 00222234 999999999999
Q ss_pred EEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHHc
Q 023561 167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRF 245 (280)
Q Consensus 167 ~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~ 245 (280)
++++|+++++++++.+.+...|+|+++.+...+++|++|+|.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++
T Consensus 149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~ 227 (360)
T PLN02586 149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227 (360)
T ss_pred eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence 999999999999999999999999977666667899999999999999999999999999 67777666554 5566789
Q ss_pred CCcEEEcCCC
Q 023561 246 GVTEFVNSKN 255 (280)
Q Consensus 246 Ga~~vi~~~~ 255 (280)
|+++++++.+
T Consensus 228 Ga~~vi~~~~ 237 (360)
T PLN02586 228 GADSFLVSTD 237 (360)
T ss_pred CCcEEEcCCC
Confidence 9999998764
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.9e-37 Score=282.29 Aligned_cols=230 Identities=26% Similarity=0.449 Sum_probs=201.1
Q ss_pred eeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 023561 20 AIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (280)
Q Consensus 20 ~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 98 (280)
+++.+++++++++++|.|.|+++||+||+.++++|++|++.+.+. .+...+|.++|||++|+|+++|+++..+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 567778877999999999999999999999999999999887443 3233568999999999999999999887 99999
Q ss_pred EecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCC------
Q 023561 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP------ 172 (280)
Q Consensus 99 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~------ 172 (280)
++.+..+|+.|.+|+.|++++|..... .|...+| +|+||+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccccc
Confidence 999999999999999999999987543 3444455 999999999999999999
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
++++++++.+.+++.++|+++ ...++++|++|+|+|+|++|++++++|+.+|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 899999999989999999975 45789999999999999999999999999999 7999999999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcCC-Cce
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLL 274 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~ 274 (280)
+.+.+.+++.+.+++++++ |++
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d 239 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLR 239 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCC
Confidence 7662223677888888887 775
No 22
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=9.4e-37 Score=277.86 Aligned_cols=212 Identities=24% Similarity=0.299 Sum_probs=188.7
Q ss_pred eeeecCCCC----CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 19 AAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 19 a~~~~~~g~----~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
|+++.++|. .++++++|.|+|+++||+||+.++|+|++|++++.|.++....|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 355655653 3899999999999999999999999999999999887654445789999999999999999999999
Q ss_pred CCEEEecCC-CCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 95 GDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 95 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
||+|++.+. .+|+.|.+|+.|.+++|++..+ .|...+| +|+||+.++..+++++|++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~ 138 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTG 138 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCC
Confidence 999987654 4799999999999999998664 4544455 9999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+++++++.+.+++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++|+
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~ 216 (329)
T TIGR02822 139 YDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGA 216 (329)
T ss_pred CCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccc
Confidence 99999999999999999976 56889999999999999999999999999999 79999999999999999999999885
Q ss_pred C
Q 023561 254 K 254 (280)
Q Consensus 254 ~ 254 (280)
.
T Consensus 217 ~ 217 (329)
T TIGR02822 217 Y 217 (329)
T ss_pred c
Confidence 4
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-36 Score=276.76 Aligned_cols=233 Identities=26% Similarity=0.416 Sum_probs=199.8
Q ss_pred eeeeeecCCCCCcEEEEeecCCC-CCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~-~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++++++. ++++++|.|.| .++||+|||.++++|++|...+..... ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 68999998876 99999999998 589999999999999999875432211 1358899999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
|+|++.+..+|+.|.+|+.|++++|+...+ +|...+| +|+||+.++...++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999987543 4444455 999999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
+++++.+. ++.+++.+ ++...+++|++|+|+|+|++|++++|+|+.+|++.|++++++++|+++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998874 56667775 46678899999999999999999999999999966899999999999999999999999876
Q ss_pred CCCccHHHHHHHhcCC-CceEEEec
Q 023561 256 CGDKSVSQVLLSIYDL-PLLTISVS 279 (280)
Q Consensus 256 ~~~~~~~~~v~~~~~g-g~~~v~~~ 279 (280)
.+ .+.+.+++.+ +++++++|
T Consensus 215 ---~~-~~~~~~~~~~~~~d~~v~d 235 (347)
T PRK10309 215 ---MS-APQIQSVLRELRFDQLILE 235 (347)
T ss_pred ---cC-HHHHHHHhcCCCCCeEEEE
Confidence 44 5567777777 77756655
No 24
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=8e-36 Score=275.23 Aligned_cols=258 Identities=34% Similarity=0.579 Sum_probs=216.9
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
++|||+++.++++++++++++.|.+.++||+||+.++++|++|+.+..+.++ ...|.++|||++|+|+++|+++..|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 5789999999877799999999999999999999999999999999988765 346889999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCcee-ecccccceeeeeEEeecccEEEcCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI-HHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
||+|++.+. .|+.|.+|+.++.++|+.....+..|..++|.-.+++..|.++ .+++..|+|++|+.++..+++++|++
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 999998764 8999999999999999986654444444443211111111110 11334569999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+++.+++.+++++.||+.++.....++++++|+|+|+|.+|++++++|+++|++.+++++++++|.++++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999988888889999999999889999999999999999779999999999999999999999998
Q ss_pred CCCCCccHHHHHHHhcCCCceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
++ .++.+.+++.++.+++.+.
T Consensus 239 ~~---~~~~~~v~~~~~~~~d~vl 259 (365)
T cd08278 239 KE---EDLVAAIREITGGGVDYAL 259 (365)
T ss_pred CC---cCHHHHHHHHhCCCCcEEE
Confidence 76 7788888888833775554
No 25
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.5e-35 Score=273.46 Aligned_cols=258 Identities=42% Similarity=0.720 Sum_probs=218.1
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
+||+++.++++++++++++.|.++++||+||+.++++|++|++.+.+..+ ...|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 57899998887799999999999999999999999999999999888754 34678999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|++.+..+|++|.+|+.+.+++|+...+.+..|...+|...|.- +|-...|+.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999998899999999999999999998765444544444222210 1222234444569999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~ 256 (280)
++++++.+++.++|.++.+...+++|++|||+|+|++|++++++|+.+|+..|++++++++|++.++++|+++++++++
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~- 237 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD- 237 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc-
Confidence 9999999899999998888889999999999988999999999999999977888888999999999999999998876
Q ss_pred CCccHHHHHHHhcCCCceEEE
Q 023561 257 GDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 257 ~~~~~~~~v~~~~~gg~~~v~ 277 (280)
.+.++.+.+++++++++|.+.
T Consensus 238 ~~~~~~~~l~~~~~~~~d~vi 258 (365)
T cd05279 238 QDKPIVEVLTEMTDGGVDYAF 258 (365)
T ss_pred ccchHHHHHHHHhCCCCcEEE
Confidence 111677888888855765444
No 26
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=5.9e-36 Score=275.01 Aligned_cols=214 Identities=26% Similarity=0.325 Sum_probs=176.9
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++...+.+++++++|.|+|+++||||||+++|||++|++++.|.++. ...|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 578888865544999999999999999999999999999999999987532 245789999999999999999 9999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCC-CCCCCccccccCCceeecccccceeeeeEEeecccEEEcCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 172 (280)
+||+|++.+..+|++|.+|+.|++++|+...+. ..|. ..+| +|+||++++.+.++++|+
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~G-------------------~~aey~~~~~~~~~~~P~ 139 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLHG-------------------FMREYFVDDPEYLVKVPP 139 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCCc-------------------cceeEEEeccccEEECCC
Confidence 999999988889999999999999999875431 0121 1234 899999999999999999
Q ss_pred CCChhhhcccchhhHHHHHHHHH------HcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHH
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGK 243 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~------~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~---~~~~~~~~~ 243 (280)
+++ ++ +.+..++.+++.++.. ..+.++|++|+|+|+|++|++++|+||.+|+ +|+++++ +++|+++++
T Consensus 140 ~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 140 SLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred CCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence 999 43 4444466665544322 2235789999999999999999999999999 7898887 688999999
Q ss_pred HcCCcEEEcCCC
Q 023561 244 RFGVTEFVNSKN 255 (280)
Q Consensus 244 ~~Ga~~vi~~~~ 255 (280)
++|++. +++.+
T Consensus 217 ~~Ga~~-v~~~~ 227 (355)
T cd08230 217 ELGATY-VNSSK 227 (355)
T ss_pred HcCCEE-ecCCc
Confidence 999987 46554
No 27
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-35 Score=275.34 Aligned_cols=230 Identities=23% Similarity=0.324 Sum_probs=187.8
Q ss_pred eeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 023561 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (280)
Q Consensus 19 a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 98 (280)
+++..+.++++++.+++.|+|+++||+|||.++|||++|++++.|.++...+|.++|||++|+|+++|+++++|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 34444544569999999999999999999999999999999998875433568999999999999999999999999999
Q ss_pred EecCCC-CCCCChhhcCCCCCCCCCCCCCc----CCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 99 IPHFLA-DCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 99 ~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
++.+.. +|+.|.+|+.|++++|++..+.. ..|...+| +|+||++++.++++++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQG-------------------GYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCC-------------------ccccEEEEchHHeEECCCC
Confidence 866654 69999999999999999865310 01222234 9999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcC-CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHcCCcEEE
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFV 251 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~Ga~~vi 251 (280)
+++++++++.+...|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +++.++++|+++++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999987644433 3689999999999999999999999999 6888876654 57888899999999
Q ss_pred cCCCCCCccHHHHHHHhcCCCceE
Q 023561 252 NSKNCGDKSVSQVLLSIYDLPLLT 275 (280)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~gg~~~ 275 (280)
++.+ . +.+.+.++ ++|.
T Consensus 229 ~~~~---~---~~v~~~~~-~~D~ 245 (375)
T PLN02178 229 VTTD---S---QKMKEAVG-TMDF 245 (375)
T ss_pred cCcC---H---HHHHHhhC-CCcE
Confidence 8754 2 34555553 4433
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.8e-35 Score=272.10 Aligned_cols=244 Identities=28% Similarity=0.383 Sum_probs=207.9
Q ss_pred eeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 023561 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG------ 91 (280)
Q Consensus 18 ~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~------ 91 (280)
||+++.++++.+++++++.|.|+++||+||+.++++|++|+....|.++...+|.++|||++|+|+++|+++..
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998877999999999999999999999999999999999887653457889999999999999999986
Q ss_pred CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCC-CCccccccCCceeecccccceeeeeEEeecc-cEEE
Q 023561 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVK 169 (280)
Q Consensus 92 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~-G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~ 169 (280)
|++||+|++.+..+|+.|.+|+.+.+++|++..+ +|...+ |. ....|+|++|++++.+ ++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~~~ 145 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAIVR 145 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCceEE
Confidence 9999999999999999999999999999998765 332211 00 0012499999999986 7999
Q ss_pred cCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 170 iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
+|++++..+++++++++.|||.++.+....++|++|||+|+|++|++++++|+.+|++.|+++++++++.++++++|+++
T Consensus 146 lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~ 225 (361)
T cd08231 146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225 (361)
T ss_pred CCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCe
Confidence 99999999999988899999998766666679999999988999999999999999977899999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 250 FVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 250 vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++++++....++.+.+++++++ ++|.++
T Consensus 226 vi~~~~~~~~~~~~~i~~~~~~~~~d~vi 254 (361)
T cd08231 226 TIDIDELPDPQRRAIVRDITGGRGADVVI 254 (361)
T ss_pred EEcCcccccHHHHHHHHHHhCCCCCcEEE
Confidence 9988752222344678888887 775554
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.4e-35 Score=269.19 Aligned_cols=233 Identities=26% Similarity=0.388 Sum_probs=203.9
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC-----------CCCCCcccccceeEEEEEe
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV 85 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~-----------~~~~p~i~G~e~~G~V~~v 85 (280)
|||+++.+++. +++++++.|+|.++||+||+.++++|++|+..+.+... ....|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 68999998776 99999999999999999999999999999887653211 0136889999999999999
Q ss_pred CCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCC-CCCCccccccCCceeecccccceeeeeEEeec
Q 023561 86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (280)
Q Consensus 86 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 164 (280)
|++++.|++||+|+..+..+|++|.+|+.+..++|+...+ .|+. .+| +|++|+.++.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~a~~~~~~~ 137 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGGG-------------------GFAEYVVVPA 137 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCCC-------------------ceeeEEEech
Confidence 9999999999999999999999999999999999987542 2221 134 8999999999
Q ss_pred ccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 165 ~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
..++++|+++++++++.+ .+..|||.++ ...++++|++|+|+|+|.+|++++|+|+.+|++.|+++++++++.+++++
T Consensus 138 ~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~ 215 (351)
T cd08233 138 YHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE 215 (351)
T ss_pred HHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 999999999999998876 5788999976 78889999999999999999999999999999789999999999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 245 FGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 245 ~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+|++.++++++ .++.+.+++++++ ++|.+.
T Consensus 216 ~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vi 246 (351)
T cd08233 216 LGATIVLDPTE---VDVVAEVRKLTGGGGVDVSF 246 (351)
T ss_pred hCCCEEECCCc---cCHHHHHHHHhCCCCCCEEE
Confidence 99999999887 7888999998887 665554
No 30
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.8e-36 Score=253.07 Aligned_cols=215 Identities=26% Similarity=0.271 Sum_probs=198.3
Q ss_pred CCcceeeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCC
Q 023561 12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (280)
Q Consensus 12 ~~~~~~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v 89 (280)
..++..|.+++++.|.. +++++.|+|+|.++|++||..++|+|+.|..+.+|.+....+|.++|-|.+|+|+++|+++
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 35677899999988865 9999999999999999999999999999999999999666889999999999999999999
Q ss_pred CCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEE
Q 023561 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (280)
Q Consensus 90 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (280)
.++++||||+... +.| .|+|++.+|...+++
T Consensus 84 tdrkvGDrVayl~------------------------------~~g-------------------~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN------------------------------PFG-------------------AYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec------------------------------cch-------------------hhheeccccceeecc
Confidence 9999999996321 233 899999999999999
Q ss_pred cCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 170 iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
+|+.+++++||++.....|||.-+++..++++|++|||+.+ |++|+++.|++|+.|+ .+|++..+++|++.+++.|++
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999998889999999999999986 9999999999999999 899999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHHhcCC-CceEEEec
Q 023561 249 EFVNSKNCGDKSVSQVLLSIYDL-PLLTISVS 279 (280)
Q Consensus 249 ~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~~~ 279 (280)
+.|+++. +++.+++.+.|+| |+|.+..+
T Consensus 194 h~I~y~~---eD~v~~V~kiTngKGVd~vyDs 222 (336)
T KOG1197|consen 194 HPIDYST---EDYVDEVKKITNGKGVDAVYDS 222 (336)
T ss_pred ceeeccc---hhHHHHHHhccCCCCceeeecc
Confidence 9999998 9999999999999 88776643
No 31
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.4e-35 Score=267.39 Aligned_cols=237 Identities=28% Similarity=0.330 Sum_probs=207.1
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.+++. +++++++.|.+.++||+||++++++|++|++.+.+..+....|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 68999999886 89999999999999999999999999999998887665445689999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc--cEEEcCCCC
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~l 174 (280)
+|++.+..+|+.|..|..|+.+.|+........+...+| +|++|+.++.. .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g-------------------~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDG-------------------VFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCc-------------------ceeEEEEcchhhCceEECCCCC
Confidence 999988889999999999999999875311001111234 89999999974 899999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
++.+++.++..+.|+|++ .+...+++|++|||+|+|++|++++++|+.+|++.+++++++++|.++++++|++++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 999999998899999997 4778899999999998899999999999999997799999999999999999999999987
Q ss_pred CCCCccHHHHHHHhcCC-CceEEE
Q 023561 255 NCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+ .++.+.+++++++ ++|.+.
T Consensus 220 ~---~~~~~~i~~~~~~~~~d~vl 240 (351)
T cd08285 220 N---GDVVEQILKLTGGKGVDAVI 240 (351)
T ss_pred C---CCHHHHHHHHhCCCCCcEEE
Confidence 6 7788888888877 775554
No 32
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.8e-35 Score=268.00 Aligned_cols=225 Identities=23% Similarity=0.338 Sum_probs=188.9
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
.+++|+++.++++++++++++.|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 35899999999999999999999999999999999999999999999887644456899999999999999999999999
Q ss_pred CCEEEecCCC-CCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 95 GDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 95 Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
||+|++.+.. .|++|.+|+.|.+++|++..+.... ....| ....|+|+||++++...++++|++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~-~~~~g--------------~~~~G~~aey~~v~~~~~~~iP~~ 152 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYND-VYTDG--------------KPTQGGFASAMVVDQKFVVKIPEG 152 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccc-cccCC--------------ccCCCccccEEEEchHHeEECCCC
Confidence 9999865544 6999999999999999886432100 00011 011249999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~Ga~~vi~ 252 (280)
+++++++.+++.+.|||.++......++|++|+|+|+|++|++++++|+.+|+ ++++++.++++++.+ +++|++++++
T Consensus 153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~ 231 (357)
T PLN02514 153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV 231 (357)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence 99999999999999999977655566899999999889999999999999999 677777777666554 5699998887
Q ss_pred CCC
Q 023561 253 SKN 255 (280)
Q Consensus 253 ~~~ 255 (280)
+.+
T Consensus 232 ~~~ 234 (357)
T PLN02514 232 SSD 234 (357)
T ss_pred CCC
Confidence 654
No 33
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=3.3e-34 Score=261.52 Aligned_cols=237 Identities=30% Similarity=0.440 Sum_probs=209.5
Q ss_pred eeeeeecCCCCCcEEEEeecCCC-CCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~-~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++.+++. ++++++|.|.| .++||+||+.++++|++|+..+.+.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 57999988877 89999999999 89999999999999999999998877655678999999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc--cEEEcCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 173 (280)
|+|+..+..+|+.|.+|..|+.++|+........+...+| +|++|++++.+ +++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDG-------------------GQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCC-------------------eeeEEEEecchhCeEEECCCC
Confidence 9999999999999999999999999987654222322334 99999999987 99999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+++++++.+++++.|||+++ ...+++++++|||.|+|.+|.+++++|+.+|...++++++++++.++++++|+++++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999976 67789999999998889999999999999997578888888999999999999999998
Q ss_pred CCCCCccHHHHHHHhcCC-CceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++ .++.+.+++++++ +++.+.
T Consensus 220 ~~---~~~~~~i~~~~~~~~~d~vl 241 (347)
T cd05278 220 KN---GDIVEQILELTGGRGVDCVI 241 (347)
T ss_pred Cc---chHHHHHHHHcCCCCCcEEE
Confidence 87 6788888888876 665444
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5.2e-34 Score=259.74 Aligned_cols=225 Identities=24% Similarity=0.419 Sum_probs=200.2
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.++++++++++++.|++.++||+||+.++++|++|...+.|..+....|.++|||++|+|+++|+++.+|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 68999999866799999999999999999999999999999999988664445688999999999999999999999999
Q ss_pred EEEecC-CCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 97 ~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
+|++.+ ...|++|.+|+.|+++.|..... .|...+| +|++|+.++...++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCC
Confidence 998754 46799999999999999998764 3333344 899999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
+.+++.+.+.+.|+|.++. ...+.++++|+|+|+|++|++++++|+.+|+ .++++++++++++.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 9999999999999999764 4589999999999999999999999999999 7999999999999999999999999876
Q ss_pred CCCccHHHHHHHh
Q 023561 256 CGDKSVSQVLLSI 268 (280)
Q Consensus 256 ~~~~~~~~~v~~~ 268 (280)
.++.+.++++
T Consensus 217 ---~~~~~~~~~~ 226 (333)
T cd08296 217 ---EDVAEALQEL 226 (333)
T ss_pred ---ccHHHHHHhc
Confidence 6677777766
No 35
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.3e-33 Score=257.02 Aligned_cols=234 Identities=30% Similarity=0.443 Sum_probs=209.0
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||++++++++++++++++.|.+.++||+||+.++++|++|+..+.+.++ ...+|.++|||++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999998877899999999999999999999999999999999887654 235678999999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+..+...|+.|..|..|..++|++..+ .|...+| +|++|+.++..+++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence 99999999989999999999999999999886 4555556 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHH-cCCCCCCEEEEECccHHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHcCCcEEE
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEFV 251 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~G~g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~Ga~~vi 251 (280)
+++++++.+++.+.|||.++... ..+.++++|||+|+|.+|++++++|+.+| . +|+++.+++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999987665 46888999999999789999999999999 6 788888899999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 252 NSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++++ . +.+.+++++++ +++.+.
T Consensus 218 ~~~~---~-~~~~i~~~~~~~~~dvvl 240 (340)
T cd05284 218 NASD---D-VVEEVRELTGGRGADAVI 240 (340)
T ss_pred cCCc---c-HHHHHHHHhCCCCCCEEE
Confidence 9886 5 88888888877 665554
No 36
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=9.4e-34 Score=258.09 Aligned_cols=222 Identities=24% Similarity=0.453 Sum_probs=195.1
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.+++. +++++++.|.|+++|++||+.++++|++|+..+.+..+...+|.++|||++|+|+.+|+++..+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999998875 99999999999999999999999999999999988765445789999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|++.+..+|+.|.+|..+++++|++... .+...+| +|++|+.++...++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG-------------------GFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEccCC-------------------cceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999976432 2222234 8999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
.+++ +..++.++|. +.+..++++|++|+|+|+|++|++++++|+. +|++.+++++++++|+++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4457788885 6678899999999999999999999999996 69977899999999999999999999999876
Q ss_pred CCCccHHHHHH
Q 023561 256 CGDKSVSQVLL 266 (280)
Q Consensus 256 ~~~~~~~~~v~ 266 (280)
.++.+.+.
T Consensus 216 ---~~~~~~~~ 223 (339)
T PRK10083 216 ---EPLGEALE 223 (339)
T ss_pred ---ccHHHHHh
Confidence 56666664
No 37
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.7e-33 Score=257.88 Aligned_cols=233 Identities=25% Similarity=0.411 Sum_probs=204.6
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC---------CCCCcccccceeEEEEEeCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---------AVFPRILGHEAIGVVESVGE 87 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~---------~~~p~i~G~e~~G~V~~vG~ 87 (280)
|||+++++++. +++++++.|++.++||+||+.++++|+.|+..+.|.... ...|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999998876 999999999999999999999999999999988875311 14577899999999999999
Q ss_pred CCC--CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCC--CCCCccccccCCceeecccccceeeeeEEee
Q 023561 88 NVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP--RDQTSRFKDLRGETIHHFVSVSSFSEYTVLD 163 (280)
Q Consensus 88 ~v~--~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~--~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 163 (280)
+++ .|++||+|+..+..+|++|..|+.|..+.|+...+ +|+. .+| +|++|+.++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~g-------------------~~~~~~~~~ 137 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNNVNG-------------------GMAEYMRFP 137 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccCCCC-------------------cceeeEEcc
Confidence 998 89999999999999999999999999999986542 3331 234 899999999
Q ss_pred cc-cEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 164 IA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 164 ~~-~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+ .++++|+++++.+++++ .++.|+|.++ +..++++|++|+|.|+|.+|.+++++|+++|+..+++++++++|.+++
T Consensus 138 ~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~ 215 (350)
T cd08256 138 KEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA 215 (350)
T ss_pred cccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH
Confidence 87 67899999999999988 7999999976 788999999999977799999999999999997788999999999999
Q ss_pred HHcCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 243 KRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 243 ~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+++|++.++++++ .++.+.+.+++++ ++|.+.
T Consensus 216 ~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvl 248 (350)
T cd08256 216 RKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYI 248 (350)
T ss_pred HHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEE
Confidence 9999999998876 7888889998887 775544
No 38
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.9e-34 Score=261.18 Aligned_cols=205 Identities=21% Similarity=0.176 Sum_probs=170.2
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC----CCCCcccccceeEEEEEeCCCCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~----~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
+..||++++++++ +++++++.|+ +++||||||+++|||++|++++.|.+.. ..+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 3578999999987 9999999995 9999999999999999999999987532 257999999999999998764
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEc
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 170 (280)
+|++||||++.+..+|+ |..| +..++|++..+ .|...+| +|+||+++|.++++++
T Consensus 77 ~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 131 (341)
T cd08237 77 TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKL 131 (341)
T ss_pred ccCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEEC
Confidence 79999999998887777 4455 35677876543 2333345 8999999999999999
Q ss_pred CCCCChhhhcccchhhHHHHHHHHH--HcCCCCCCEEEEECccHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHcCC
Q 023561 171 DPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 171 P~~ls~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~G~g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
|+++++++|+++. +++++|+++.. ...+++|++|+|+|+|++|++++|+++. +|..+|++++++++|+++++++++
T Consensus 132 P~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~ 210 (341)
T cd08237 132 PDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADE 210 (341)
T ss_pred CCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCc
Confidence 9999999887654 88899987643 3456889999999999999999999986 666589999999999999887665
Q ss_pred cE
Q 023561 248 TE 249 (280)
Q Consensus 248 ~~ 249 (280)
+.
T Consensus 211 ~~ 212 (341)
T cd08237 211 TY 212 (341)
T ss_pred ee
Confidence 43
No 39
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=4.7e-33 Score=256.49 Aligned_cols=255 Identities=41% Similarity=0.634 Sum_probs=212.0
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.+++.++++++++.|.+.++||+||+.++++|+.|...+.+.++ ..+|.++|+|++|+|+++|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 68999999888899999999999999999999999999999999888765 35678999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|+..+..+|++|.+|..++.++|+...+.. +|...++..++.- -|.......+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGIL-GGQLPDGTRRFTA-DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCccccccc-ccccCCCcccccc-cCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 9999999999999999999999998764320 1111111000000 0001101122359999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~ 256 (280)
.+++++.+++.++|.++.+...+.++++|+|+|+|.+|.+++++|+.+|++.|+++.+++++.++++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999998888889999999999977999999999999999966999999999999999999999998876
Q ss_pred CCccHHHHHHHhcCC-CceEEE
Q 023561 257 GDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 257 ~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.++.+.+++++.+ +++.+.
T Consensus 237 --~~~~~~l~~~~~~~~vd~vl 256 (363)
T cd08279 237 --DDAVEAVRDLTDGRGADYAF 256 (363)
T ss_pred --ccHHHHHHHHcCCCCCCEEE
Confidence 6788888888866 665443
No 40
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.2e-32 Score=256.06 Aligned_cols=248 Identities=27% Similarity=0.366 Sum_probs=207.0
Q ss_pred eeeeeecCCCCCcEEEEeecCCCC-CCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~-~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++.++++ +++++++.|.|. ++||+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++.++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 68999988765 999999999984 9999999999999999999999887655678999999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCc-CCC---CCCCCCccccccCCceeeccc--ccceeeeeEEeecc--cE
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPW---MPRDQTSRFKDLRGETIHHFV--SVSSFSEYTVLDIA--HV 167 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g---~~~~G~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~--~~ 167 (280)
|+|+..+...|++|.+|+.+.++.|++..... +.+ ....|..++ .+++ ..|+|++|++++.+ .+
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~v~~~~~~~ 151 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGY--------SHLTGGYAGGQAEYVRVPFADVGP 151 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccccccc--------ccccCCCCCeeEEEEEcccccCeE
Confidence 99999888899999999999999999865431 111 111110000 0000 13599999999987 89
Q ss_pred EEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 168 ~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
+++|+++++.+++++++...|+|+++ ....+.+|++|+|+|+|.+|.+++++|+..|...++++++++++.+++++++.
T Consensus 152 ~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~ 230 (386)
T cd08283 152 FKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG 230 (386)
T ss_pred EECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence 99999999999999998999999987 78889999999999889999999999999998679999999999999999844
Q ss_pred cEEEcCCCCCCc-cHHHHHHHhcCC-CceEEE
Q 023561 248 TEFVNSKNCGDK-SVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 248 ~~vi~~~~~~~~-~~~~~v~~~~~g-g~~~v~ 277 (280)
..++++.+ . ++.+.+++++++ ++|.+.
T Consensus 231 ~~vi~~~~---~~~~~~~l~~~~~~~~~D~vl 259 (386)
T cd08283 231 AETINFEE---VDDVVEALRELTGGRGPDVCI 259 (386)
T ss_pred cEEEcCCc---chHHHHHHHHHcCCCCCCEEE
Confidence 46787765 4 488888888887 665443
No 41
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.1e-32 Score=251.71 Aligned_cols=236 Identities=28% Similarity=0.384 Sum_probs=207.2
Q ss_pred eeeeeecCCCCCcEEEEeecCCC-CCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~-~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++.+++. +++++++.|+| .++||+||++++++|++|+..+.|.++...+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999998886 99999999996 79999999999999999999998876544558899999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc--cEEEcCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 173 (280)
|+|+..+...|++|.+|..+..+.|....+. .|...+| +|++|+.++.. .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLIDG-------------------TQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccCC-------------------eeeeEEEcccccCceEECCCC
Confidence 9999998899999999999999999876542 2222334 89999999987 89999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
++..+++.+.+.+.+||.++....++.++++|+|.|+|.+|.+++++|+.+|+.++++++++++|.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999988999999877777889999999999889999999999999995488889999999999999999999998
Q ss_pred CCCCCccHHHHHHHhcCC-CceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++ .++.+.+.+++++ +++.+.
T Consensus 219 ~~---~~~~~~i~~~~~~~~~d~vl 240 (345)
T cd08286 219 AK---GDAIEQVLELTDGRGVDVVI 240 (345)
T ss_pred cc---ccHHHHHHHHhCCCCCCEEE
Confidence 76 6777888888877 665444
No 42
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.9e-32 Score=250.78 Aligned_cols=236 Identities=27% Similarity=0.396 Sum_probs=205.9
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC------------CCCCCcccccceeEEEEE
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF------------PAVFPRILGHEAIGVVES 84 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~------------~~~~p~i~G~e~~G~V~~ 84 (280)
|||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.+.++ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 78999988888899999999999999999999999999999998877543 123467899999999999
Q ss_pred eCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeec
Q 023561 85 VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (280)
Q Consensus 85 vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 164 (280)
+|+++.++++||+|+..+...|++|.+|..+..++|.+..+. |....| +|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g-------------------~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---GIFQDG-------------------GYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---eeeccC-------------------cceeeEEecH
Confidence 999999999999999999999999999999999999886542 222334 8999999999
Q ss_pred ccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 165 ~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
..++++|+++++.+++.+.+.+.|||+++......+++++|+|+|+|.+|++++++|+.+|++.|++++.+++|.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999987666666789999999889999999999999999888999999999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 245 FGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 245 ~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+|++.+++.++ .++.+.+.+..+++++.+.
T Consensus 219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vi 248 (350)
T cd08240 219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVI 248 (350)
T ss_pred hCCcEEecCCC---ccHHHHHHHHhCCCCcEEE
Confidence 99999988876 6777778877665654443
No 43
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.6e-32 Score=255.44 Aligned_cols=243 Identities=19% Similarity=0.172 Sum_probs=202.6
Q ss_pred Ccceeeeeeec--CCCC---CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC----------CCCCcccccc
Q 023561 13 KPIQCRAAIAT--APGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----------AVFPRILGHE 77 (280)
Q Consensus 13 ~~~~~~a~~~~--~~g~---~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~----------~~~p~i~G~e 77 (280)
.+.+|||+++. ++|. .+++++++.|.++++||+||+.++++|++|++.+.+.... ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 56789999885 3333 3789999999999999999999999999999887765210 1123588999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCC-CCCCccccccCCceeeccccccee
Q 023561 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSF 156 (280)
Q Consensus 78 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~ 156 (280)
++|+|+++|++++.+++||+|++.+...|++|..|+.+..++|+...+ +|.. .+| +|
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~g-------------------~~ 146 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNYG-------------------SF 146 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCCC-------------------cc
Confidence 999999999999999999999999999999999999999999987654 3432 234 89
Q ss_pred eeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHH--cCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc
Q 023561 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (280)
Q Consensus 157 ~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~ 233 (280)
++|++++..+++++|+++++.+++.+.+++.|||+++... .+++++++|+|+|+ |++|++++++|+.+|+ .+++++
T Consensus 147 a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~ 225 (393)
T cd08246 147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVV 225 (393)
T ss_pred eeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEe
Confidence 9999999999999999999999999999999999987554 67899999999998 9999999999999999 677888
Q ss_pred CChhHHHHHHHcCCcEEEcCCCCC-------------------CccHHHHHHHhcCC--CceEEEec
Q 023561 234 VISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQVLLSIYDL--PLLTISVS 279 (280)
Q Consensus 234 ~~~~~~~~~~~~Ga~~vi~~~~~~-------------------~~~~~~~v~~~~~g--g~~~v~~~ 279 (280)
++++|+++++++|+++++++++.+ ...+.+.+.+++++ ++ ++++|
T Consensus 226 ~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~-d~vid 291 (393)
T cd08246 226 SSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDP-DIVFE 291 (393)
T ss_pred CCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCC-eEEEE
Confidence 899999999999999999875410 01366778888877 45 44444
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.8e-32 Score=249.15 Aligned_cols=235 Identities=31% Similarity=0.450 Sum_probs=206.7
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.+++.++++++.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|+|++|+|+.+|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 69999998888899999999999999999999999999999999988766556688999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc--cEEEcCCCC
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~l 174 (280)
+|+..+...|++|.+|..|..++|++... .|...+| +|++|++++.. +++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG-------------------SFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------------cceeEEEcccccCceEECCCCC
Confidence 99887888999999999999999999643 3333345 89999999975 899999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
++.+++.+.+++.|||+++.+..++.++++|+|+|+|++|++++++|+..|+ .|+++.+++++.+.++++|++++++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999998999999987778889999999999999999999999999999 789998899999999999999999876
Q ss_pred CCCCccHHHHHHHhcCCCceEE
Q 023561 255 NCGDKSVSQVLLSIYDLPLLTI 276 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~gg~~~v 276 (280)
+ +.++.+.+.+++++++|.+
T Consensus 218 ~--~~~~~~~~~~~~~~~~d~v 237 (345)
T cd08260 218 E--VEDVAAAVRDLTGGGAHVS 237 (345)
T ss_pred c--chhHHHHHHHHhCCCCCEE
Confidence 3 2456677777766555433
No 45
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.2e-32 Score=247.79 Aligned_cols=234 Identities=25% Similarity=0.383 Sum_probs=202.0
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||++++++++...++++|.|.|.++||+||+.++++|++|+..+.+..+. ..|.++|||++|+|+.+|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999998874449999999999999999999999999999988886543 3477899999999999999999999999
Q ss_pred EEEecCC-CCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 97 VVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 97 ~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
+|++.+. .+|+.|.+|..+..++|..... .|+.++| +|++|+.++..+++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCC
Confidence 9987554 6799999999999999987653 4444555 999999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
+.+++.+.+...|+|+++ ....+++|++|||+|+|++|++++++|+. .|+ +|+++++++++++.++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999976 77889999999999999999999999998 599 899999999999999999999999875
Q ss_pred CCCCccHHHHHHHhcCCCceEEEe
Q 023561 255 NCGDKSVSQVLLSIYDLPLLTISV 278 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~gg~~~v~~ 278 (280)
. ..++.+.+++.++ +++.+++
T Consensus 216 ~--~~~~~~~v~~~~~-~~d~vi~ 236 (338)
T PRK09422 216 R--VEDVAKIIQEKTG-GAHAAVV 236 (338)
T ss_pred c--cccHHHHHHHhcC-CCcEEEE
Confidence 3 1456677777766 5554443
No 46
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.6e-32 Score=257.15 Aligned_cols=227 Identities=20% Similarity=0.252 Sum_probs=183.1
Q ss_pred ceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhh-hcCCC----C--CCCCcccccceeEEEEEeCC
Q 023561 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDF----P--AVFPRILGHEAIGVVESVGE 87 (280)
Q Consensus 15 ~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~-~g~~~----~--~~~p~i~G~e~~G~V~~vG~ 87 (280)
|+|||+++.+++. ++++++|.|+|+++||+|||.++|||++|++.+ .|... . ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 4689999999886 999999999999999999999999999999976 45321 1 13688999999999999999
Q ss_pred CCC-CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc-
Q 023561 88 NVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA- 165 (280)
Q Consensus 88 ~v~-~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 165 (280)
+++ .|++||||++.+...|+.|..|. + +|...+| +|+||++++..
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~-------------~g~~~~G-------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G-------------YSYTYPG-------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C-------------ccccCCC-------------------cceEEEEecHHh
Confidence 998 59999999998888898887762 1 2333345 99999999986
Q ss_pred ---cEEEcCCCCChhhhcccchhhH---HHHHHH--------HHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcC--CCe
Q 023561 166 ---HVVKVDPTVPPNRACLLSCGVS---TGVGAA--------WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG--ATR 228 (280)
Q Consensus 166 ---~~~~iP~~ls~~~aa~l~~~~~---ta~~~l--------~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g--~~~ 228 (280)
.++++|+++++++++++. +++ +++.++ .+..++++|++|+|+|+ |++|++++|+|+.+| +.+
T Consensus 127 ~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~ 205 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSL 205 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCce
Confidence 689999999999988652 222 233322 24567899999999986 999999999999975 457
Q ss_pred EEEEcCChhHHHHHHHc--------CCc-EEEcCCCCCCccHHHHHHHhcCC-CceEEEe
Q 023561 229 IIGVDVISEKFEIGKRF--------GVT-EFVNSKNCGDKSVSQVLLSIYDL-PLLTISV 278 (280)
Q Consensus 229 vi~~~~~~~~~~~~~~~--------Ga~-~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~~ 278 (280)
|++++.+++|+++++++ |++ .++++++ ++++.+.+++++++ |+|.++.
T Consensus 206 Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid 263 (410)
T cd08238 206 LVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFV 263 (410)
T ss_pred EEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEE
Confidence 99999999999999997 776 5677653 24688889999888 7766553
No 47
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=7.2e-32 Score=248.84 Aligned_cols=254 Identities=30% Similarity=0.427 Sum_probs=210.9
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG---VV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~---~~ 93 (280)
|||+++.+++.+++++++|.|.++++||+||+.++++|++|+.++.+.++. .+|.++|||++|+|+.+|+++.+ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999988777999999999999999999999999999999988887653 56889999999999999999988 99
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCC-CCCCCccccccCCceeecc--cccceeeeeEEeecccEEEc
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHF--VSVSSFSEYTVLDIAHVVKV 170 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~i 170 (280)
+||+|+..+..+|++|.+|..+++++|+...+.+..+. .+.|-..+. ..-.+++ +..|+|++|+.++.+.++++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLF---RLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCccccc---ccCCCccccccCCcceeEEEechhhEEEC
Confidence 99999998888999999999999999998653211110 111100000 0000001 12358999999999999999
Q ss_pred CCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 171 P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
|+++++.+++.+.+++.|||.++.....+.++++|+|+|+|.+|.+++++|+..|++.+++++.++++.+.++++|++.+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v 236 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT 236 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence 99999999999999999999988777788999999999889999999999999999658999889999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 251 VNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 251 i~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+++++ .++.+.+++++++ +++.+.
T Consensus 237 ~~~~~---~~~~~~l~~~~~~~~~d~vl 261 (367)
T cd08263 237 VNAAK---EDAVAAIREITGGRGVDVVV 261 (367)
T ss_pred ecCCc---ccHHHHHHHHhCCCCCCEEE
Confidence 99887 7788888888876 665554
No 48
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5e-32 Score=247.19 Aligned_cols=233 Identities=26% Similarity=0.395 Sum_probs=198.9
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
||++++.+++++++++++|.|.|.++||+||++++++|++|+.++.+.. .....|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 5899999888889999999999999999999999999999998766532 1124577899999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|++.+..+|..|..|..+.+++|++..+ .+...+| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------------AFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------------cceeeEEechHHeEECcCC
Confidence 99999999999999999999999999988542 3333445 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+++.+++.+ ..+.+++.++.. ...+|++|+|.|+|.+|.+++++|+.+|++.|++++.++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888755 466666665432 34689999998889999999999999999668888888999999999999999998
Q ss_pred CCCCCccHHHHHHHhcCC-CceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++ .++.+.+++++++ +++.+.
T Consensus 216 ~~---~~~~~~~~~~~~~~~~d~v~ 237 (341)
T PRK05396 216 AK---EDLRDVMAELGMTEGFDVGL 237 (341)
T ss_pred cc---ccHHHHHHHhcCCCCCCEEE
Confidence 87 7788889888877 775554
No 49
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=9.2e-32 Score=249.84 Aligned_cols=237 Identities=24% Similarity=0.378 Sum_probs=198.0
Q ss_pred eeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCC------C-CCCCCcccccceeEEEEEeCCC
Q 023561 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD------F-PAVFPRILGHEAIGVVESVGEN 88 (280)
Q Consensus 16 ~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~------~-~~~~p~i~G~e~~G~V~~vG~~ 88 (280)
++.+.++..+ .++++++|.|+++++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++|++
T Consensus 28 ~~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 105 (384)
T cd08265 28 NLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKN 105 (384)
T ss_pred cceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCC
Confidence 4444555532 49999999999999999999999999999998876321 1 1345789999999999999999
Q ss_pred CCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEE
Q 023561 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (280)
Q Consensus 89 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (280)
+..|++||+|++.+..+|+.|..|+.+++++|..... .|...+| +|++|+.++...++
T Consensus 106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~~ 163 (384)
T cd08265 106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYAW 163 (384)
T ss_pred CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHeE
Confidence 9999999999999999999999999999999997553 3433345 89999999999999
Q ss_pred EcCCCC-------ChhhhcccchhhHHHHHHHHHH-cCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 169 KVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 169 ~iP~~l-------s~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
++|+++ ++. ++++..++.++|+++... .++++|++|+|+|+|++|++++++|+.+|+..|++++++++|.+
T Consensus 164 ~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~ 242 (384)
T cd08265 164 EINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN 242 (384)
T ss_pred ECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 999863 445 555556889999987665 68999999999988999999999999999977999998999999
Q ss_pred HHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 241 IGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 241 ~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+++++|+++++++++....++.+.+++++++ ++|.+.
T Consensus 243 ~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvl 280 (384)
T cd08265 243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQV 280 (384)
T ss_pred HHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEE
Confidence 9999999999988752224788889999988 775444
No 50
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.8e-31 Score=247.03 Aligned_cols=242 Identities=25% Similarity=0.347 Sum_probs=200.0
Q ss_pred eeeeeecCCCCCcEEEEeecCCC-CCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~-~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
||++++.+++. ++++++|+|.+ +++||+||++++++|++|++...|..+ ..+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 57888888764 99999999996 799999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc--cEEEcCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 173 (280)
|+|+..+..+|+.|..|..++.+.|.+..+. ++....|.... ....|+|++|++++.. .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG--RAGGAYGYVDM----------GPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc--ccccccccccc----------CCCCCeeeeEEEeecccCcEEECCCC
Confidence 9999999999999999999999999874321 00000110000 0012489999999976 89999999
Q ss_pred CChh---hhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 174 VPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 174 ls~~---~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
+++. +++.+.+++.|+|+++ ....+.+|++|+|.|+|++|++++++|+++|+..|++++++++|+++++++|++ .
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-P 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-E
Confidence 9998 5677788899999976 788899999999988899999999999999986788899999999999999994 5
Q ss_pred EcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 251 VNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 251 i~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++++ +++.+.+.++++++++.++
T Consensus 225 v~~~~---~~~~~~i~~~~~~~~d~v~ 248 (375)
T cd08282 225 IDFSD---GDPVEQILGLEPGGVDRAV 248 (375)
T ss_pred eccCc---ccHHHHHHHhhCCCCCEEE
Confidence 67765 7788888888765554443
No 51
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.5e-31 Score=243.59 Aligned_cols=231 Identities=32% Similarity=0.521 Sum_probs=202.5
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++++++. +++++++.|++.++|++|||.++++|+.|+....+..+...+|.++|+|++|+|+.+|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999988875 99999999999999999999999999999999888765555688899999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|+..+..+|+.|..|+.+..++|.+... .+....| +|++|+.++.+ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRDG-------------------GFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCCC-------------------cceeEEEechh-eEECCCCCCH
Confidence 99998889999999999999999965543 2222233 89999999999 9999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~ 256 (280)
++++++ ..+.+++.++ ...++.+|++|||+|+|.+|.+++++|+.+|+ +|+++.+++++.++++++|+++++++++
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999877 4777888865 77889999999999889999999999999999 7888888899999999999999999887
Q ss_pred CCccHHHHHHHhcCC-CceEEE
Q 023561 257 GDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 257 ~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.++.+.+.+++++ +++.+.
T Consensus 213 --~~~~~~l~~~~~~~~vd~vl 232 (337)
T cd08261 213 --EDVAARLRELTDGEGADVVI 232 (337)
T ss_pred --cCHHHHHHHHhCCCCCCEEE
Confidence 6788889888877 665554
No 52
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.9e-31 Score=243.27 Aligned_cols=235 Identities=25% Similarity=0.372 Sum_probs=200.3
Q ss_pred eeeeeecCCCCCcEEEEeecCCCC-CCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~-~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++.+++. ++++++++|.|. ++||+||+.++++|+.|.....+.++ ...|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 57899987754 999999999985 99999999999999999988887654 2457889999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCC-CCCCCccccccCCceeecccccceeeeeEEeecc--cEEEcCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDP 172 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~ 172 (280)
|+|+..+..+|++|.+|..+.+++|++.......+. ..+ |+|++|+.++.+ .++++|+
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~~~v~~~~~~~~~~p~ 139 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLD-------------------GAQAEYVRVPFADGTLLKLPD 139 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCC-------------------CceeEEEEcccccCceEECCC
Confidence 999998889999999999999999988643200010 112 389999999865 9999999
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
++++.+++.+++++.|||+++. ..++.++++|+|+|+|.+|.+++++|+.+|+.++++++++++|.++++++|+. +++
T Consensus 140 ~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~ 217 (344)
T cd08284 140 GLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PIN 217 (344)
T ss_pred CCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEe
Confidence 9999999999999999999764 57889999999998899999999999999976788888889999999999986 466
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.+. .++.+.+.+++++ ++|.+.
T Consensus 218 ~~~---~~~~~~l~~~~~~~~~dvvi 240 (344)
T cd08284 218 FED---AEPVERVREATEGRGADVVL 240 (344)
T ss_pred cCC---cCHHHHHHHHhCCCCCCEEE
Confidence 665 6788888888887 775544
No 53
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.2e-31 Score=243.01 Aligned_cols=233 Identities=29% Similarity=0.393 Sum_probs=199.7
Q ss_pred eeeeeecCCCCCcEEEEeecCCC-CCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~-~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++.+++. +++++.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 68999988776 99999999996 8999999999999999999888876543 457899999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc--cEEEcCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 173 (280)
|+|++....+|+.|.+|+.+..++|....+ .|...+| +|++|+.++.. .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999999997654 4445556 89999999974 99999999
Q ss_pred CChhhhc-----ccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 174 VPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 174 ls~~~aa-----~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
+++..+. .+.+.+.++|+++ ...++++|++|+|.|+|.+|++++++|+.+|++.++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9982221 2235678888865 577899999999988899999999999999997799999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 249 EFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 249 ~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.++++++ .++.+.+.+.+++ +++.+.
T Consensus 216 ~v~~~~~---~~~~~~i~~~~~~~~~d~il 242 (345)
T cd08287 216 DIVAERG---EEAVARVRELTGGVGADAVL 242 (345)
T ss_pred eEecCCc---ccHHHHHHHhcCCCCCCEEE
Confidence 9999987 7788888888877 775554
No 54
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.7e-31 Score=242.12 Aligned_cols=233 Identities=27% Similarity=0.408 Sum_probs=204.6
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++++++. +.+++.+.|.+.+++|+||++++++|+.|+.++.+..+....|.++|+|++|+|+.+|++++.|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 58999998875 99999999999999999999999999999999887654334577899999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeeccc-----EEEcC
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-----VVKVD 171 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~iP 171 (280)
+|+..+...|++|+.|..++.++|+...+ .|...+| +|++|++++..+ ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG-------------------GFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------------cceeeEEecccccccccEEECC
Confidence 99999999999999999999999988654 3433445 899999999998 99999
Q ss_pred CCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEE
Q 023561 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (280)
Q Consensus 172 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi 251 (280)
+++++.+++.+ +++.+||+++ ...++++|++|+|+|+|.+|.+++++|+..|.+.++++.+++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQ-RKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999999876 6889999976 455899999999998899999999999999995488888899999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 252 NSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++++ .++.+.+++++++ ++|.++
T Consensus 216 ~~~~---~~~~~~i~~~~~~~~vd~vl 239 (343)
T cd08235 216 DAAE---EDLVEKVRELTDGRGADVVI 239 (343)
T ss_pred cCCc---cCHHHHHHHHhCCcCCCEEE
Confidence 9887 7888888888887 665554
No 55
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.1e-31 Score=248.49 Aligned_cols=241 Identities=21% Similarity=0.195 Sum_probs=200.4
Q ss_pred cceeeeeeecC--CCCC---cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC----------CCCCC-cccccc
Q 023561 14 PIQCRAAIATA--PGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFP-RILGHE 77 (280)
Q Consensus 14 ~~~~~a~~~~~--~g~~---l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~----------~~~~p-~i~G~e 77 (280)
+.+|||+++.. +++| +++++++.|.|.++|++||+.++++|++|.+...+... ....| .++|||
T Consensus 5 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e 84 (398)
T TIGR01751 5 PETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSD 84 (398)
T ss_pred chhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccc
Confidence 46799999954 5543 99999999999999999999999999999877655321 00123 379999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCC-CCCCccccccCCceeeccccccee
Q 023561 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSF 156 (280)
Q Consensus 78 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~ 156 (280)
++|+|+++|+++..|++||+|++.+...|++|.+|+.|+...|+.... +|.. .+| +|
T Consensus 85 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~g-------------------~~ 142 (398)
T TIGR01751 85 ASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNFG-------------------SF 142 (398)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCCc-------------------cc
Confidence 999999999999999999999999999999999999999999987542 2221 233 89
Q ss_pred eeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHH--HcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc
Q 023561 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (280)
Q Consensus 157 ~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~ 233 (280)
++|++++..+++++|+++++++++.+.+...|+|+++.. ..++.+|++|+|+|+ |.+|++++++|+++|+ ++++++
T Consensus 143 ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~ 221 (398)
T TIGR01751 143 AEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVV 221 (398)
T ss_pred eEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEc
Confidence 999999999999999999999999999999999997654 467899999999998 9999999999999999 677777
Q ss_pred CChhHHHHHHHcCCcEEEcCCCCC-------------------CccHHHHHHHhcCC-CceEEE
Q 023561 234 VISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 234 ~~~~~~~~~~~~Ga~~vi~~~~~~-------------------~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+++++.+.++++|++.++|+++.. ...+.+.+.+++++ +++.++
T Consensus 222 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vl 285 (398)
T TIGR01751 222 SSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVF 285 (398)
T ss_pred CCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEE
Confidence 888999999999999999875410 01355677888887 665544
No 56
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-31 Score=243.49 Aligned_cols=213 Identities=29% Similarity=0.408 Sum_probs=191.3
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.+++++++++++|.|.+.++|++||+.++++|++|+..+.+..+...+|.++|||++|+|+.+|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 68999999998899999999999999999999999999999998888765555678999999999999999998899999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|++.+..+|++|.+|..+.+++|+.... +|...+| +|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCH
Confidence 99998889999999999999999999654 4544455 8999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
.+++.+.+.+.++|+++.+. .+.++++|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++ ++++++++
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~ 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch
Confidence 99999999999999976554 8899999999998 9999999999999999 788888889999988888 76666543
No 57
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=5.2e-31 Score=242.84 Aligned_cols=238 Identities=29% Similarity=0.396 Sum_probs=194.2
Q ss_pred cceeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC---CCCCCcccccceeEEEEEeCCCCC
Q 023561 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 14 ~~~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
-.+++++++..++. +++++++.|.|.++||+||+.++++|++|+..+.+... ....|.++|||++|+|+++|+++.
T Consensus 15 ~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 15 EEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred ccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 34566777776655 99999999999999999999999999999998876321 113577899999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCC-CCCCCccccccCCceeecccccceeeeeEEeecccEEE
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (280)
+|++||+|++.+..+|+.|..|..|..++|++..+ ++. ..+| +|++|+.++.+.+++
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~g-------------------~~~~y~~v~~~~~~~ 151 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVHG-------------------SLANQVVHPADLCFK 151 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCCC-------------------cccceEEcchHHeEE
Confidence 99999999999999999999999999999987543 221 1234 899999999999999
Q ss_pred cCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 170 iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
+|+++++.++++. .++.++|.++ +..++.++++|+|+|+|++|++++++|+.+|++.+++++++++|.++++++|+++
T Consensus 152 ~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~ 229 (364)
T PLN02702 152 LPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADE 229 (364)
T ss_pred CCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE
Confidence 9999999988753 2555677765 7788999999999988999999999999999977899999999999999999998
Q ss_pred EEcCCCCCCccHHHHHHHh--cCC-CceEEE
Q 023561 250 FVNSKNCGDKSVSQVLLSI--YDL-PLLTIS 277 (280)
Q Consensus 250 vi~~~~~~~~~~~~~v~~~--~~g-g~~~v~ 277 (280)
+++++. ...++.+.+.++ +.+ +++.+.
T Consensus 230 ~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi 259 (364)
T PLN02702 230 IVLVST-NIEDVESEVEEIQKAMGGGIDVSF 259 (364)
T ss_pred EEecCc-ccccHHHHHHHHhhhcCCCCCEEE
Confidence 876542 124566666654 223 554443
No 58
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=5.6e-31 Score=238.91 Aligned_cols=234 Identities=32% Similarity=0.437 Sum_probs=205.4
Q ss_pred eeeeeecCCCCC-cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 17 CRAAIATAPGEP-LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 17 ~~a~~~~~~g~~-l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
||++++..++++ +.+++.+.|.+.++||+||+.++++|+.|.....+.++ ...+|.++|+|++|+|+.+|+++..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 689999999987 68888899999999999999999999999999888765 2345789999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|+..+..+|+.|.+|..++.+.|..... .|...+| +|++|+.++...++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999977643 3444445 89999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
++.+++.+..++.|||.++....+++++++|||.|+|.+|.+++++|+..|+ +|++++.++++.+.++++|++++++.+
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999988777889999999998889999999999999999 799999999999999999999998877
Q ss_pred CCCCccHHHHHHHhcCC-CceEEE
Q 023561 255 NCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+ ..+.+.+ +.+++ ++|.+.
T Consensus 218 ~---~~~~~~~-~~~~~~~~D~vi 237 (338)
T cd08254 218 D---DSPKDKK-AAGLGGGFDVIF 237 (338)
T ss_pred C---cCHHHHH-HHhcCCCceEEE
Confidence 6 5666666 55666 665443
No 59
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.5e-31 Score=240.64 Aligned_cols=232 Identities=31% Similarity=0.462 Sum_probs=196.7
Q ss_pred eeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcC-CC--CCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DF--PAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 19 a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~-~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|++++++.. +++++++.|.|.++||+||+.++++|+.|...+.+. .. ....|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467788854 999999999999999999999999999998876432 11 11357789999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
|+|++.+..+|++|.+|..|..++|++..+. .....+| +|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVDG-------------------TLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCCC-------------------ceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999975431 0111234 899999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
+.+++.+ .++.++++++ ...++++|++|+|.|+|++|.+++++|+.+|++.|+++.+++++.++++++|++.++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 4788999875 8889999999999988999999999999999955899988999999999999999998876
Q ss_pred CCCcc---HHHHHHHhcCC-CceEEE
Q 023561 256 CGDKS---VSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 256 ~~~~~---~~~~v~~~~~g-g~~~v~ 277 (280)
.+ +.+.+.+.+++ ++|.++
T Consensus 217 ---~~~~~~~~~~~~~~~~~~~d~vl 239 (343)
T cd05285 217 ---EDTPESAEKIAELLGGKGPDVVI 239 (343)
T ss_pred ---ccchhHHHHHHHHhCCCCCCEEE
Confidence 44 37788888877 665554
No 60
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1e-30 Score=236.45 Aligned_cols=223 Identities=35% Similarity=0.526 Sum_probs=196.1
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++..+++++.++++|.|.+.++||+|+++++++|++|+..+.|..+....|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 58999987666699999999999999999999999999999999988766556688999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|+..+...|++|.+|+.+..++|++.. .+|....| +|++|++++...++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG-------------------GFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC-------------------eeeeEEEechhheEECCCCCCH
Confidence 9999998999999999999999999852 24544455 8999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
++++.+.+++.+||.++.. ..+.++++++|+|+ |++|++++++++..|. .++++.+++++.+.++++|++.+++.+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~- 215 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS- 215 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH-
Confidence 9999999999999997765 88999999999998 9999999999999999 788888888999999889988877543
Q ss_pred CCCccHHHHHHHh
Q 023561 256 CGDKSVSQVLLSI 268 (280)
Q Consensus 256 ~~~~~~~~~v~~~ 268 (280)
. +.+.+.+.
T Consensus 216 ---~-~~~~~~~~ 224 (332)
T cd08259 216 ---K-FSEDVKKL 224 (332)
T ss_pred ---H-HHHHHHhc
Confidence 2 44555544
No 61
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-30 Score=238.00 Aligned_cols=235 Identities=29% Similarity=0.412 Sum_probs=205.9
Q ss_pred eeeeeecCCC-CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 17 ~~a~~~~~~g-~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
|||+++.+++ ..+++++++.|.|.++|++||+.++++|++|..++.+..+. ...|.++|||++|+|+++|+++..+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 6899998877 34999999999999999999999999999999988876543 234678899999999999999999999
Q ss_pred CCEEEecC-CCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 95 GDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 95 Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
||+|+..+ ...|++|.+|+.++..+|++... .|+...| +|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCC
Confidence 99998765 57899999999999999998754 3444445 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+.....|||.++.. .+++++++|||+|+ +.+|.+++++|+.+|+ +|+++.+++++.+.++++|++++++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999989899999997654 58999999999998 7799999999999999 8999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEEe
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTISV 278 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~~ 278 (280)
+++ .++.+.+.+++++ +++.+..
T Consensus 217 ~~~---~~~~~~~~~~~~~~~vd~vl~ 240 (341)
T cd08297 217 FKK---SDDVEAVKELTGGGGAHAVVV 240 (341)
T ss_pred CCC---ccHHHHHHHHhcCCCCCEEEE
Confidence 887 6788889988877 7766553
No 62
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.2e-30 Score=236.26 Aligned_cols=226 Identities=27% Similarity=0.355 Sum_probs=190.5
Q ss_pred eeeeeecCCC-CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g-~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+.. ...+|.++|||++|+|+.+|+++..|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK-VKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC-CCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6888887766 458888988888999999999999999999998876432 22357789999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
|+|++.+...|+.|.+|..|..++|++..+ +|....| +|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCC
Confidence 999999999999999999999999997543 3443444 899999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
+.+++.+.+.+.++|+++. ..++++|++|+|+|+ |++|++++++|+.+|+ .++++. +.+.++++|++++++++
T Consensus 138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch
Confidence 9999999999999999764 488999999999998 9999999999999999 677775 34677789999998765
Q ss_pred CCCCccHHHHHHHhcCCCceEEE
Q 023561 255 NCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+ ..+.+++++ +++|.+.
T Consensus 212 ~-----~~~~l~~~~-~~~d~vl 228 (325)
T cd08264 212 E-----VEEKVKEIT-KMADVVI 228 (325)
T ss_pred H-----HHHHHHHHh-CCCCEEE
Confidence 4 245566666 5554443
No 63
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.98 E-value=1.5e-30 Score=237.42 Aligned_cols=221 Identities=23% Similarity=0.345 Sum_probs=190.9
Q ss_pred eeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 023561 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (280)
Q Consensus 18 ~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 97 (280)
|++++++.+..|++++++.|+|.++||+||+.++++|++|+....+......+|.++|||++|+|+++|+++.+|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57888888877999999999999999999999999999999998887654556889999999999999999999999999
Q ss_pred EE-ecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 98 VI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 98 V~-~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
|+ ......|++|.+|+.+..++|++..... .|....| ....|+|++|+.++...++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCCCH
Confidence 97 4455689999999999999999865431 1111111 112348999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
.+++.+.+...+||.++ +...+++|++++|.|.|.+|++++++++.+|+ .++++++++++++.++++|++.+++.+.
T Consensus 146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD 222 (337)
T ss_pred HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc
Confidence 99999999999999965 45568999999998889999999999999999 8999999999999999999999988765
No 64
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.98 E-value=6.4e-31 Score=238.41 Aligned_cols=207 Identities=19% Similarity=0.219 Sum_probs=177.0
Q ss_pred eeeeeecCCCC-----CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCC
Q 023561 17 CRAAIATAPGE-----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 17 ~~a~~~~~~g~-----~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
|||+++.+++. .++++++|.|.|+++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 68999998885 3788899999999999999999999999999999887643 35689999999999999999998
Q ss_pred C-CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEE
Q 023561 91 G-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (280)
Q Consensus 91 ~-~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (280)
+ |++||+|+..+. .+| +|++|++++.+.+++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~~g-------------------~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------SYG-------------------TYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------CCC-------------------cchheeeecHHHeEE
Confidence 6 999999974310 023 899999999999999
Q ss_pred cCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEE-Cc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 170 iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
+|+++++.+++.+.+...|+|. +.+.... ++++++|+ |+ |++|++++|+|+.+|+ +|++++++++|+++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 9999999999988878889975 4555555 56666665 55 9999999999999999 79999999999999999999
Q ss_pred cEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 248 TEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 248 ~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++++++++ +++.+.+++++++ +++.+.
T Consensus 190 ~~~i~~~~---~~~~~~v~~~~~~~~~d~vi 217 (324)
T cd08291 190 EYVLNSSD---PDFLEDLKELIAKLNATIFF 217 (324)
T ss_pred cEEEECCC---ccHHHHHHHHhCCCCCcEEE
Confidence 99999887 7899999999887 775544
No 65
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.98 E-value=3.2e-30 Score=233.87 Aligned_cols=214 Identities=29% Similarity=0.443 Sum_probs=190.3
Q ss_pred eeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 023561 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (280)
Q Consensus 18 ~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 97 (280)
||+++.++|..+++++++.|.+.++|++||+.++++|++|...+.+......+|.++|||++|+|+.+|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899988767999999999999999999999999999999998887654456889999999999999999999999999
Q ss_pred EEecCC-CCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 98 VIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 98 V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
|++.+. .+|++|.+|+.++.++|++..+ ++....| +|++|+.++.++++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCH
Confidence 987655 6799999999999999999754 3332334 8999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
.+++.+.+...+||.++. ...+.++++|+|+|+|.+|.+++++|+.+|+ +|+++.+++++.+.++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALR-DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHH-hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC
Confidence 999999989999999764 4789999999999888899999999999999 7999999999999999999988887654
No 66
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.98 E-value=5.2e-30 Score=231.85 Aligned_cols=235 Identities=22% Similarity=0.318 Sum_probs=202.9
Q ss_pred eeeeeecCCCC--CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~--~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++...+. .+++++.+.|.+.+++|+||+.++++|++|+.++.|..+. ...|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 57888874443 2788888888889999999999999999999998876542 24578899999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|++.+...|+.|.+|..+.+++|+...+ .|....| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999987543 4444445 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+++++.++|.++.+..++.++++++|+|+ +.+|++++++++..|+ +++.+++++++.+.++++|.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999998899999998888889999999999998 7999999999999999 7888888999999998899888887
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
..+ .++.+.+.+.+.+ +++.++
T Consensus 218 ~~~---~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 218 YRK---EDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred cCC---hHHHHHHHHHhCCCCCcEEE
Confidence 665 6677777777766 665544
No 67
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=3e-30 Score=235.56 Aligned_cols=232 Identities=28% Similarity=0.424 Sum_probs=195.0
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++++++..+++++.+.|.|.++|++||+.++++|+.|+.++.+.. .....|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888779999999999999999999999999999988765421 1123567899999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+..+.++|+.|.+|+.+++++|+... ..|....| +|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVDTDG-------------------CFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEeccCCC-------------------cceEEEEechHHcEECcCC
Confidence 9999999999999999999999999997642 23333344 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
++.+++ ++..++.++++++. ...++|++|+|.|+|.+|.+++++|+.+|...|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998555 55557788887654 455789999998889999999999999998668888888999999999999999987
Q ss_pred CCCCCccHHHHHHHhcCC-CceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+. .++. .+.+++++ +++.+.
T Consensus 216 ~~---~~~~-~~~~~~~~~~vd~vl 236 (341)
T cd05281 216 RE---EDVV-EVKSVTDGTGVDVVL 236 (341)
T ss_pred cc---ccHH-HHHHHcCCCCCCEEE
Confidence 76 6777 78888877 664444
No 68
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.97 E-value=3e-30 Score=233.13 Aligned_cols=207 Identities=25% Similarity=0.428 Sum_probs=181.6
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.+++. +++++++.|+++++||+||+.++++|++|...+.|..+ .|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 58999988764 99999999999999999999999999999999888654 4788999999999999998 68999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCC-CCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
+|...+..+|+.|.+|..|....|+.... .+. ..+| +|++|++++.++++++|++++
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~ 131 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG-------------------AFAEYLTLPLENLHVVPDLVP 131 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------------ceEEEEEechHHeEECcCCCC
Confidence 99999999999999999999998888653 333 1344 899999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
..+++.+ .++.++|. +.+..+++++++|+|+|+|.+|.+++++|+.+|+ ++++++.++++++.++++|++.+++++.
T Consensus 132 ~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~ 208 (319)
T cd08242 132 DEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA 208 (319)
T ss_pred HHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc
Confidence 9888864 35566665 5678889999999999889999999999999999 6899998999999999999988887654
No 69
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.97 E-value=4.4e-30 Score=234.32 Aligned_cols=231 Identities=28% Similarity=0.474 Sum_probs=200.9
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++++++. +.+++.+.|++.++||+||+.++++|+.|+....+.+. ...|.++|+|++|+|+.+|+++..|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999998876 99999999999999999999999999999998877652 24578899999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|+..+...|+.|.+|..+++..|+.... +|...+| +|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG-------------------AFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------------cccceEEechHHeEECcCCCCH
Confidence 99999888999999999999999988542 4433445 8999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~ 256 (280)
.+++++ ....++|.++. ...++++++|+|+|+|.+|.+++++|+.+|++.++++.+++++.++++++|++.++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999887 57889999764 778899999999988999999999999999955999998899999999999999998876
Q ss_pred CCccHHHHHHHhcCC-CceEEE
Q 023561 257 GDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 257 ~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.. .+.+++.+++ +++.+.
T Consensus 214 --~~-~~~~~~~~~~~~~d~vl 232 (343)
T cd08236 214 --ED-VEKVRELTEGRGADLVI 232 (343)
T ss_pred --cc-HHHHHHHhCCCCCCEEE
Confidence 55 6777777777 665544
No 70
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.97 E-value=3.5e-30 Score=233.48 Aligned_cols=215 Identities=28% Similarity=0.450 Sum_probs=191.9
Q ss_pred eeeeeecCCCC----CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 023561 17 CRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (280)
Q Consensus 17 ~~a~~~~~~g~----~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 92 (280)
|||+++.+++. ++++++.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68899988883 58898988888999999999999999999999988876655568899999999999999999999
Q ss_pred CCCCEEEecCC-CCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcC
Q 023561 93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (280)
Q Consensus 93 ~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 171 (280)
++||+|++.+. .+|++|.+|+.+..++|+...+ +|...+| +|++|+.++...++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECC
Confidence 99999976544 6799999999999999998764 4443445 89999999999999999
Q ss_pred CCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEE
Q 023561 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (280)
Q Consensus 172 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi 251 (280)
+++++.+++.+.+++.|||+++ +..+++++++|+|+|+|++|++++++++..|+ +|+++..++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999976 88899999999999889999999999999998 889998899999999999998888
Q ss_pred cCCC
Q 023561 252 NSKN 255 (280)
Q Consensus 252 ~~~~ 255 (280)
+.+.
T Consensus 217 ~~~~ 220 (329)
T cd08298 217 DSDD 220 (329)
T ss_pred ccCc
Confidence 7653
No 71
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=5.7e-30 Score=233.37 Aligned_cols=222 Identities=24% Similarity=0.309 Sum_probs=184.9
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC-----------CCCCCcccccceeEEEEEe
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV 85 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~-----------~~~~p~i~G~e~~G~V~~v 85 (280)
|||+++.++ ++++++++.|++.++||+||+.++++|+.|+..+.|... ....|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 588998766 599999999999999999999999999999999887321 1235788999999999999
Q ss_pred CCCCCC-CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeec
Q 023561 86 GENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (280)
Q Consensus 86 G~~v~~-~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 164 (280)
|+++++ |++||+|+..+...|+.|..|..|+. ...+| +|++|++++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-------------~~~~g-------------------~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-------------PEAPG-------------------GYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-------------cCCCC-------------------ceeeeEEech
Confidence 999987 99999999999999999999932211 01123 8999999999
Q ss_pred ccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 165 ~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+.++++|+++++.+++ +..++.++|++ ....++++|++|||+|+|.+|.+++++|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 55688899987 578899999999999889999999999999999778888889999999999
Q ss_pred cCCcEEEcCCCCCCccHHH---HHHHhcCC-CceEEE
Q 023561 245 FGVTEFVNSKNCGDKSVSQ---VLLSIYDL-PLLTIS 277 (280)
Q Consensus 245 ~Ga~~vi~~~~~~~~~~~~---~v~~~~~g-g~~~v~ 277 (280)
+|+++++++++ .+..+ .+.+.+++ +++.+.
T Consensus 205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vi 238 (341)
T cd08262 205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIF 238 (341)
T ss_pred cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEE
Confidence 99999998775 32211 35555655 665444
No 72
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=5.8e-30 Score=232.37 Aligned_cols=230 Identities=29% Similarity=0.458 Sum_probs=199.1
Q ss_pred eeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 96 (280)
|||+++.+++. +++++++.|++.++||+||++++++|+.|.....|..+. .+|.++|+|++|+|+.+|++++++++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998885 999999999999999999999999999999998887653 3688999999999999999999999999
Q ss_pred EEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCCh
Q 023561 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (280)
Q Consensus 97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~ 176 (280)
+|+..+...|++|.+|..++.++|+.... .|...+| +|++|++++..+++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCH
Confidence 99998888999999999999999988753 4443455 8999999999999999999999
Q ss_pred hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCC
Q 023561 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (280)
Q Consensus 177 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~ 256 (280)
.+++.+ ..+.+++.++ ...++.++++|+|+|+|.+|.+++++|+..|++.++++++++++.+.++++|++.++++++
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998876 6788898876 7889999999999988999999999999999955888999999999999999998888776
Q ss_pred CCccHHHHHHHhcCC-CceEEE
Q 023561 257 GDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 257 ~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.++... +.+.+ ++|.++
T Consensus 214 --~~~~~~--~~~~~~~vd~v~ 231 (334)
T cd08234 214 --EDPEAQ--KEDNPYGFDVVI 231 (334)
T ss_pred --CCHHHH--HHhcCCCCcEEE
Confidence 454444 34444 664444
No 73
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.97 E-value=1.1e-29 Score=228.98 Aligned_cols=233 Identities=27% Similarity=0.442 Sum_probs=197.6
Q ss_pred eeeeeecCCC-CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g-~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++++.+ ..+++++++.|.+.++||+||+.++++|++|...+.+.+.....|.++|+|++|+|+.+|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788888655 349999999999999999999999999999999888875333457899999999999999999999999
Q ss_pred CEEEecCC-CCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 96 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
|+|+..+. .+|+.|.+|..+....|++.. .+|...+| +|++|++++...++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRK---GIGTQADG-------------------GFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCc---eeeecCCC-------------------ceEEEEEcchHHeEECcCCC
Confidence 99988775 679999999999999998742 13333344 89999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEE--cCChhHHHHHHHcCCcEEEc
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV--DVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~Ga~~vi~ 252 (280)
++.+++ +.....++|+++....+++++++|+|.|+|.+|.+++++|+.+|+ +|+++ ..++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 556888999988888899999999998779999999999999999 67666 335568888999999888 8
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++. .++.+.+.+++++ +++.+.
T Consensus 216 ~~~---~~~~~~l~~~~~~~~vd~vl 238 (306)
T cd08258 216 GGE---EDLAELVNEITDGDGADVVI 238 (306)
T ss_pred CCc---CCHHHHHHHHcCCCCCCEEE
Confidence 776 7888888888876 665544
No 74
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.97 E-value=6e-30 Score=231.00 Aligned_cols=207 Identities=24% Similarity=0.248 Sum_probs=181.6
Q ss_pred eeeeeecCCCCC---cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 023561 17 CRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGV 92 (280)
Q Consensus 17 ~~a~~~~~~g~~---l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~ 92 (280)
|||+++.+++.+ ++++++|.|.+.++||+||+.++++|++|+..+.|.++ ....|.++|||++|+|+++|+++..+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999887753 78999999999999999999999999999999988764 23468899999999999999999999
Q ss_pred CCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCC
Q 023561 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (280)
Q Consensus 93 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 172 (280)
++||+|++.+ .. |+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAP------------------------------VH-------------------GTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEecc------------------------------CC-------------------CcceeEEEEchHHeEECCC
Confidence 9999997431 11 2899999999999999999
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEE
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi 251 (280)
++++++++.+.+...++|+++ ...++++|++|||+|+ |.+|++++++|+++|+ .++++..++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999888889999865 5688999999999998 9999999999999999 778887788888888889999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 252 NSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
++++ .++.+.+.+++++ |++.+.
T Consensus 190 ~~~~---~~~~~~i~~~~~~~~~d~v~ 213 (324)
T cd08292 190 STEQ---PGWQDKVREAAGGAPISVAL 213 (324)
T ss_pred cCCC---chHHHHHHHHhCCCCCcEEE
Confidence 8877 7888999999988 776554
No 75
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=1.6e-29 Score=230.71 Aligned_cols=227 Identities=27% Similarity=0.446 Sum_probs=193.8
Q ss_pred cCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 023561 23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99 (280)
Q Consensus 23 ~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~ 99 (280)
++++.+++++++|.|.|.++||+||+.++++|+.|..++.+... ....|.++|+|++|+|+++|++++.|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 57788899999999999999999999999999999987655321 123467899999999999999999999999999
Q ss_pred ecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhh
Q 023561 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA 179 (280)
Q Consensus 100 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~a 179 (280)
+.+...|++|..|..+..++|++... +|+...| +|++|++++.+.++++|+++++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------CFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---EeecCCC-------------------cceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999999743 3333344 8999999999999999999998655
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCc
Q 023561 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK 259 (280)
Q Consensus 180 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~ 259 (280)
++..++.++++++ ....++|++|+|.|+|++|.+++++|+.+|.+.|++++++++|.++++++|++.++++++ .
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~ 216 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E 216 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence 4566888888865 345678999999888999999999999999955888888899999999999999998876 7
Q ss_pred cHHHHHHHhcCC-CceEEE
Q 023561 260 SVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 260 ~~~~~v~~~~~g-g~~~v~ 277 (280)
++.+.+.+++++ +++.+.
T Consensus 217 ~~~~~l~~~~~~~~~d~vl 235 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFL 235 (340)
T ss_pred CHHHHHHHhcCCCCCCEEE
Confidence 788889888877 775554
No 76
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=3.7e-30 Score=229.29 Aligned_cols=184 Identities=21% Similarity=0.319 Sum_probs=153.7
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCce
Q 023561 73 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 146 (280)
Q Consensus 73 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~ 146 (280)
++|||++|+|+++|++++ +|++||||++.+..+|+.|.+|+.|+++.|++..+ +|....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~----------- 66 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALD----------- 66 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCccccc-----------
Confidence 579999999999999998 89999999999999999999999999999998654 2321100
Q ss_pred eecccccceeeeeEEeecc-cEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcC
Q 023561 147 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 225 (280)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~-~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g 225 (280)
......|+|+||+++|.. +++++|+++++++++.+.+.+.|+|+++ +.....+|++|+|+|+|++|++++|+|+.+|
T Consensus 67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 000012499999999987 7999999999999999998999999965 4556679999999999999999999999999
Q ss_pred CCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 226 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 226 ~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+++|++++++++|+++++++|++.++++++ ..+.+++++++ |+|.++
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vi 192 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVAL 192 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEE
Confidence 966999999999999999999999998654 24567777777 765544
No 77
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.97 E-value=1.9e-29 Score=229.76 Aligned_cols=215 Identities=30% Similarity=0.478 Sum_probs=179.4
Q ss_pred eecCCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhh-cCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 023561 21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (280)
Q Consensus 21 ~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~-g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 97 (280)
++++.+. ++++++++|.+.++||+||+.++++|++|+.... +.... ...|.++|||++|+|+++|+++.+|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4566665 9999999999999999999999999999988763 32211 235778999999999999999999999999
Q ss_pred EEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChh
Q 023561 98 VIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPN 177 (280)
Q Consensus 98 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~ 177 (280)
|+..+..+|+.|.+|..|+.++|++..+ ++... + .....|+|++|++++.+.++++|+++++.
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~-~-------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAM-R-------------FPHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecc-c-------------cCCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999998543 22110 0 00012389999999999999999999999
Q ss_pred hhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 178 RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 178 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
+|+. ..++.++|.++.+.... ++++|||.|+|.+|.+++++|+.+|++.++++++++++.++++++|+++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~ 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc
Confidence 9876 46888999876555455 8999999888999999999999999967899998899999999999999998765
No 78
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.97 E-value=8.5e-30 Score=230.06 Aligned_cols=183 Identities=21% Similarity=0.296 Sum_probs=150.1
Q ss_pred eeeeeeecCCCCCcEEEEeecCCCCCCeEEEEeeeeecC-hhhhhhhhcCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 023561 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLC-HSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG 91 (280)
Q Consensus 16 ~~~a~~~~~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~-~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~ 91 (280)
++||+++.+++. +++++++.|+|+++|||||+++++|| ++|++++.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 578999988876 99999999999999999999999996 7999988887643 2579999999999999999998 6
Q ss_pred CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcC
Q 023561 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (280)
Q Consensus 92 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 171 (280)
|++||||+.. |..|..|.. | ..| +|+||++++.+.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~--~~G-------------------~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G--LFG-------------------GASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c--cCC-------------------cccceEEcCHHHceeCC
Confidence 9999999863 222322210 1 123 89999999999999999
Q ss_pred CCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 172 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
++++++. +.+. ++.|||+++.+ . ..++++++|+|+|++|++++|+|+.+|++.|++++.+++|++.+++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~ 187 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG 187 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh
Confidence 9999864 4444 67899997644 3 3468899999999999999999999999778888888888877654
No 79
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.97 E-value=3.7e-29 Score=228.39 Aligned_cols=195 Identities=21% Similarity=0.207 Sum_probs=162.9
Q ss_pred cEEEEeecCCCC-CCeEEEEeeeeecChhhhhhhh---cCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCC
Q 023561 29 LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA 104 (280)
Q Consensus 29 l~~~~~~~p~~~-~~eVlIkv~~~~i~~~D~~~~~---g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 104 (280)
+++++++.|+|. ++||||||+++|||+.|...+. +......+|.++|||++|+|+++|+++++|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 889999999875 9999999999999999864332 1111124678999999999999999999999999996310
Q ss_pred CCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhh----hc
Q 023561 105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----AC 180 (280)
Q Consensus 105 ~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~----aa 180 (280)
++|+||++++.+.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 1699999999999999999864432 44
Q ss_pred ccchhhHHHHHHHHHHcCCCCC--CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCCcEEEcCCCC
Q 023561 181 LLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNC 256 (280)
Q Consensus 181 ~l~~~~~ta~~~l~~~~~~~~g--~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga~~vi~~~~~ 256 (280)
.+..++.|||+++.+..++++| ++|||+|+ |++|++++|+|+++|+.+|++++++++|.+++++ +|+++++++++
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 5667899999988777788877 99999998 9999999999999998679999999999999887 99999999887
Q ss_pred CCccHHHHHHHhcCCCceEEE
Q 023561 257 GDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 257 ~~~~~~~~v~~~~~gg~~~v~ 277 (280)
.++.+.+++++++|+|.+.
T Consensus 211 --~~~~~~i~~~~~~gvd~vi 229 (345)
T cd08293 211 --DNVAERLRELCPEGVDVYF 229 (345)
T ss_pred --CCHHHHHHHHCCCCceEEE
Confidence 7888999988765765554
No 80
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.97 E-value=4.1e-29 Score=226.99 Aligned_cols=209 Identities=21% Similarity=0.202 Sum_probs=177.5
Q ss_pred eeeeecCC---CCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 023561 18 RAAIATAP---GEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (280)
Q Consensus 18 ~a~~~~~~---g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 92 (280)
||+++.++ +++ ++++++|.|+|+++||+||++++++|+.|..++.+..+...+|.++|+|++|+|+++|+++..|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57788776 443 8888999999999999999999999999999888866544568899999999999999999999
Q ss_pred CCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCC
Q 023561 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (280)
Q Consensus 93 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 172 (280)
++||+|+... +...+| +|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~---------------------------~~~~~g-------------------~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAG---------------------------DIDRPG-------------------SNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcC---------------------------CCCCCC-------------------cccceEEEcHHHcccCCC
Confidence 9999997421 011123 899999999999999999
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCC-----CCEEEEECc-cHHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHc
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRF 245 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~G~-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~ 245 (280)
++++++++.++++..|||.++....++++ |++|||+|+ |++|.+++++|+.+ |+ +|+++.+++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999998878888877 999999997 99999999999998 99 899998889999999999
Q ss_pred CCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 246 GVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 246 Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
|++++++++. ++.+.+.+..+++++.+.
T Consensus 194 g~~~~~~~~~----~~~~~i~~~~~~~vd~vl 221 (336)
T TIGR02817 194 GAHHVIDHSK----PLKAQLEKLGLEAVSYVF 221 (336)
T ss_pred CCCEEEECCC----CHHHHHHHhcCCCCCEEE
Confidence 9999998653 566777775433665554
No 81
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.97 E-value=1.6e-28 Score=222.43 Aligned_cols=210 Identities=20% Similarity=0.204 Sum_probs=184.8
Q ss_pred eeeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 023561 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 16 ~~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
+|||+++.++|.+ +++++++.|.|.++||+||+.++|+|++|+.+..+.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999887764 88999999999999999999999999999998888765545688999999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-----------------------------~-------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS-----------------------------A-------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC-----------------------------C-------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999963210 0 138999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+.+...++|.++.....+++|++|+|+|+ |.+|.+++++++.+|+ .+++++.++++++.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999888899999998777788999999999986 9999999999999999 7888888999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.++ .++.+.+++++++ +++.+.
T Consensus 192 ~~~---~~~~~~~~~~~~~~~~d~vl 214 (327)
T PRK10754 192 YRE---ENIVERVKEITGGKKVRVVY 214 (327)
T ss_pred CCC---CcHHHHHHHHcCCCCeEEEE
Confidence 876 7888899999888 765444
No 82
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.8e-28 Score=223.94 Aligned_cols=223 Identities=25% Similarity=0.311 Sum_probs=178.5
Q ss_pred eeeeeecCCCCC--cEEEE-eecCCCCCCeEEEEeeeeecChhhhhhhhcCCC--------------------CCCCCcc
Q 023561 17 CRAAIATAPGEP--LVIDE-VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------------------PAVFPRI 73 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~-~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~i 73 (280)
|||+++..++.+ +++++ ++.|.|.+++|+||+.++++|++|+.++.|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 578888876643 55554 577788999999999999999999998877542 1346889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeeccccc
Q 023561 74 LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSV 153 (280)
Q Consensus 74 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~ 153 (280)
+|||++|+|+++|+++..|++||+|+..+...|++|..|. .... .|...+|
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~--------~~~~---~~~~~~g------------------ 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA--------DIDY---IGSERDG------------------ 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc--------cccc---cCCCCCc------------------
Confidence 9999999999999999999999999988888887765532 1111 2222234
Q ss_pred ceeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEE
Q 023561 154 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (280)
Q Consensus 154 g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~ 232 (280)
+|++|+.++...++++|+++++.+++.+.+++.|+|.++ ....+++|++|+|+|+ |++|++++++|+.+|+ +++++
T Consensus 132 -~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 132 -GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred -cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 899999999999999999999999999999999999965 7788999999999998 9999999999999999 67777
Q ss_pred cCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 233 ~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
..++ +++.++++|++.+++... ..+.+ .+.+++ ++|.+.
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi 248 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVA 248 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEE
Confidence 7655 888889999987666543 34433 555666 665444
No 83
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.97 E-value=2.2e-28 Score=223.20 Aligned_cols=208 Identities=22% Similarity=0.244 Sum_probs=172.2
Q ss_pred ceeeeeeecCCCC-CcEEEEeec----CCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccce--eEEEEEeC
Q 023561 15 IQCRAAIATAPGE-PLVIDEVIV----DPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEA--IGVVESVG 86 (280)
Q Consensus 15 ~~~~a~~~~~~g~-~l~~~~~~~----p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~--~G~V~~vG 86 (280)
.-+|+++...+.. .|++++.++ |+|+++||||||++++||+.|+..+.|.... ...|.++|++. .|.+..+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~ 85 (338)
T cd08295 6 VILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD 85 (338)
T ss_pred EEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence 3467777644443 399999887 8899999999999999999999998885432 24578889754 45555678
Q ss_pred CCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeec-c
Q 023561 87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-A 165 (280)
Q Consensus 87 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~ 165 (280)
+++..|++||+|+.. |+|+||++++. .
T Consensus 86 ~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~ 113 (338)
T cd08295 86 SGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQ 113 (338)
T ss_pred cCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchh
Confidence 888899999999521 27999999999 7
Q ss_pred cEEEcC-CCCChh-hhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 166 HVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 166 ~~~~iP-~~ls~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.++++| +++++. +++++.+++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++++|.+++
T Consensus 114 ~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~ 192 (338)
T cd08295 114 DLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLL 192 (338)
T ss_pred ceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999995 678886 788899999999998878889999999999998 9999999999999999 799999999999999
Q ss_pred HH-cCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 243 KR-FGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 243 ~~-~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
++ +|+++++++++ ++++.+.+++.+++|++.++
T Consensus 193 ~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~ 226 (338)
T cd08295 193 KNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYF 226 (338)
T ss_pred HHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEE
Confidence 98 99999999754 14788888887765765544
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.97 E-value=2.3e-28 Score=221.33 Aligned_cols=200 Identities=20% Similarity=0.213 Sum_probs=168.2
Q ss_pred eeeeeeecCC--CCC----cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCC
Q 023561 16 QCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (280)
Q Consensus 16 ~~~a~~~~~~--g~~----l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v 89 (280)
+||||++.++ |++ +++++++.|+|+++||||||++++||+.|...... . ...|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~-~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L-NEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C-CCCCcEecceEEEEEec---CC
Confidence 6899999883 433 88999999999999999999999999887652221 1 13588999999999995 44
Q ss_pred CCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc---c
Q 023561 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA---H 166 (280)
Q Consensus 90 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~ 166 (280)
+.|++||+|+.. ++|++|++++.. .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 579999999631 168999999999 9
Q ss_pred EEEcCCCCCh-----hhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 167 VVKVDPTVPP-----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 167 ~~~iP~~ls~-----~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
++++|++++. .+++++++++.|||+++.+..++++|++|||+|+ |++|.+++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 9999999982 2234677899999998888899999999999997 9999999999999999 7999999999999
Q ss_pred HHHHcCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 241 IGKRFGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 241 ~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++++|+++++++++ +++.+.+++++++|++.+.
T Consensus 183 ~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vl 216 (329)
T cd08294 183 WLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYF 216 (329)
T ss_pred HHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEE
Confidence 999999999999987 7888888888766765544
No 85
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.96 E-value=3.7e-28 Score=221.32 Aligned_cols=212 Identities=24% Similarity=0.268 Sum_probs=178.5
Q ss_pred eeeeeecCCCCC---cEEEEeecCCCCC-CeEEEEeeeeecChhhhhhhhcCCCCC-C----CCcccccceeEEEEEeCC
Q 023561 17 CRAAIATAPGEP---LVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKMKDFPA-V----FPRILGHEAIGVVESVGE 87 (280)
Q Consensus 17 ~~a~~~~~~g~~---l~~~~~~~p~~~~-~eVlIkv~~~~i~~~D~~~~~g~~~~~-~----~p~i~G~e~~G~V~~vG~ 87 (280)
|||+++.+.+.+ +.++++|.|.|.+ +||+||+.++++|++|...+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999988875 8999999999888 999999999999999999988875421 2 577899999999999999
Q ss_pred CCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccE
Q 023561 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (280)
Q Consensus 88 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 167 (280)
++..|++||+|+.... .. |+|++|+.++...+
T Consensus 81 ~v~~~~~Gd~V~~~~~-----------------------------~~-------------------g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP-----------------------------GL-------------------GTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC-----------------------------CC-------------------ccchheEeccHHHe
Confidence 9999999999974321 11 38999999999999
Q ss_pred EEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHH
Q 023561 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIG 242 (280)
Q Consensus 168 ~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~----~~~~~~ 242 (280)
+++|+++++.+++.+++.+.|+|+++.....++++++|||+|+ |++|++++++|+..|+ +++++..++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999998877788999999999998 9999999999999999 666666554 678888
Q ss_pred HHcCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 243 KRFGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 243 ~~~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++|+++++++++....++.+.+..+++++++.+.
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vl 226 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLAL 226 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEE
Confidence 89999999988761001677778877765554443
No 86
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.96 E-value=2e-28 Score=211.02 Aligned_cols=195 Identities=24% Similarity=0.326 Sum_probs=171.1
Q ss_pred CcceeeeeeecCCCCC---cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCC
Q 023561 13 KPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGEN 88 (280)
Q Consensus 13 ~~~~~~a~~~~~~g~~---l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~ 88 (280)
++...|++++.++|+| ++++++++|....++|+||.+|+.||++|+..++|.+|- +.+|.+-|.|++|+|+.+|++
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 5567899999999988 888999999988888999999999999999999999986 468999999999999999999
Q ss_pred CCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEE
Q 023561 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (280)
Q Consensus 89 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (280)
+++|++||+|+.... +.|+|++|.+.+++.++
T Consensus 96 vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~Li 127 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDLI 127 (354)
T ss_pred cCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccceE
Confidence 999999999985432 12489999999999999
Q ss_pred EcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHH
Q 023561 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE----KFEIGK 243 (280)
Q Consensus 169 ~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~----~~~~~~ 243 (280)
++++.++.+.||++..+..|||+.+.+-.++++||+|+-.|+ +++|.+.+|+||+.|.+.|-++ |+.. -.+.++
T Consensus 128 ~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk 206 (354)
T KOG0025|consen 128 KVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLK 206 (354)
T ss_pred EcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHH
Confidence 999999999999999999999998888899999999999998 9999999999999999655555 4433 334455
Q ss_pred HcCCcEEEcCCCC
Q 023561 244 RFGVTEFVNSKNC 256 (280)
Q Consensus 244 ~~Ga~~vi~~~~~ 256 (280)
.+||++||...++
T Consensus 207 ~lGA~~ViTeeel 219 (354)
T KOG0025|consen 207 SLGATEVITEEEL 219 (354)
T ss_pred HcCCceEecHHHh
Confidence 6999999976653
No 87
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.96 E-value=2.7e-27 Score=217.30 Aligned_cols=211 Identities=18% Similarity=0.243 Sum_probs=169.3
Q ss_pred CCcceeeeeeecC-C-CC----CcEEEE---eecCC-CCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCccccc--cee
Q 023561 12 GKPIQCRAAIATA-P-GE----PLVIDE---VIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH--EAI 79 (280)
Q Consensus 12 ~~~~~~~a~~~~~-~-g~----~l~~~~---~~~p~-~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~--e~~ 79 (280)
+...++|.+++.+ + |. .|++++ .+.|. ++++|||||+.++++|+.|...+.+.......|.++|+ |++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~ 83 (348)
T PLN03154 4 GQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGF 83 (348)
T ss_pred CccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEee
Confidence 3445678888843 2 21 288877 35553 47999999999999999988755442222235889998 889
Q ss_pred EEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeee
Q 023561 80 GVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEY 159 (280)
Q Consensus 80 G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~ 159 (280)
|+|..+|++++.|++||+|+.. |+|+||
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey 111 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEY 111 (348)
T ss_pred EEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEE
Confidence 9999999999999999999521 279999
Q ss_pred EEeecc--cEEE--cCCCCChh-hhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc
Q 023561 160 TVLDIA--HVVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (280)
Q Consensus 160 ~~~~~~--~~~~--iP~~ls~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~ 233 (280)
++++.. ++++ +|+++++. +++++++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus 112 ~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~ 190 (348)
T PLN03154 112 SLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 190 (348)
T ss_pred EEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEc
Confidence 999875 3544 58999986 678889999999998878889999999999998 9999999999999999 799999
Q ss_pred CChhHHHHHH-HcCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 234 VISEKFEIGK-RFGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 234 ~~~~~~~~~~-~~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
++++|+++++ ++|+++++|+++ .+++.+.+++++++|+|.++
T Consensus 191 ~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~ 233 (348)
T PLN03154 191 GSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYF 233 (348)
T ss_pred CCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEE
Confidence 9999999997 799999999864 13677888888766775544
No 88
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.9e-27 Score=213.15 Aligned_cols=230 Identities=25% Similarity=0.295 Sum_probs=190.6
Q ss_pred eeeeeecCCC--CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g--~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||++++..+ +.+++++.+.|.+.++|++||+.++++|++|+....+..+. ...|.++|||++|+|+.+|+++++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998665 34888888888899999999999999999999988776543 23678899999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+......|..+.+ +.|.... +.|...+| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~------~~~~~~~---~~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPP------TAEDEAS---ALGGPIDG-------------------VLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccccc------ccccccc---ccccccCc-------------------eeeeEEEecHHHeEECCCC
Confidence 999998876655543322 3342211 23333344 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+++.+++.+.+.+.++|.++.....+++|++|+|+|+|++|++++++++++|+ +|++++.++++++.++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999987777889999999999889999999999999999 78999999999999999999999887
Q ss_pred CCCCCccHHHHHHHhcCC-CceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+. ..++.+.+++.+++ +++.+.
T Consensus 212 ~~--~~~~~~~~~~~~~~~~~d~~i 234 (336)
T cd08276 212 RT--TPDWGEEVLKLTGGRGVDHVV 234 (336)
T ss_pred Cc--ccCHHHHHHHHcCCCCCcEEE
Confidence 53 25677888888887 765544
No 89
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.96 E-value=2.8e-27 Score=214.61 Aligned_cols=188 Identities=21% Similarity=0.197 Sum_probs=158.5
Q ss_pred cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCC
Q 023561 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTE 108 (280)
Q Consensus 29 l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~ 108 (280)
|++++++.|+|+++||||||+++++|+.+. .|.+.....|.++|.|++|+|+++|+ .|++||+|+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 889999999999999999999999999764 34333223478999999999999874 59999999631
Q ss_pred ChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEc----CCCCChhhh-cccc
Q 023561 109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLS 183 (280)
Q Consensus 109 c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i----P~~ls~~~a-a~l~ 183 (280)
++|++|++++.+.+.++ |++++++++ ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 15899999999888877 899999987 6788
Q ss_pred hhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHH
Q 023561 184 CGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS 262 (280)
Q Consensus 184 ~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~ 262 (280)
+++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|.++++++|+++++++++ .+.+.
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~ 197 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLE 197 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHH
Confidence 899999998888899999999999997 9999999999999999 7999999999999999999999999875 12566
Q ss_pred HHHHHhcCCCceEEE
Q 023561 263 QVLLSIYDLPLLTIS 277 (280)
Q Consensus 263 ~~v~~~~~gg~~~v~ 277 (280)
+.+++.+++|+|.+.
T Consensus 198 ~~~~~~~~~gvdvv~ 212 (325)
T TIGR02825 198 ETLKKASPDGYDCYF 212 (325)
T ss_pred HHHHHhCCCCeEEEE
Confidence 666666554765544
No 90
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.96 E-value=1.3e-27 Score=218.31 Aligned_cols=214 Identities=26% Similarity=0.347 Sum_probs=178.9
Q ss_pred eeeeeecCCC-CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g-~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||++++.++ .++++++++.|+|+++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899999884 348999999999999999999999999999988775543 12347789999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
|+|+......|+ +...+ |+|++|++++...++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------NDPRN-------------------GAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------CCCCC-------------------CcccceEEechhheEECCCCCC
Confidence 999865432211 11112 3899999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCC----------CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+.+++.+++.+.|+|.++.+..++ +++++|+|+|+ |.+|++++++|+.+|+ .|+++. +++|++.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987665544 78999999998 9999999999999999 677776 5689999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 245 FGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 245 ~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+|+++++++++ .++.+.++++++++++.+.
T Consensus 197 ~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl 226 (339)
T cd08249 197 LGADAVFDYHD---PDVVEDIRAATGGKLRYAL 226 (339)
T ss_pred cCCCEEEECCC---chHHHHHHHhcCCCeeEEE
Confidence 99999999877 7888888888766765444
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.96 E-value=3.3e-27 Score=213.66 Aligned_cols=209 Identities=22% Similarity=0.264 Sum_probs=179.5
Q ss_pred eeeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 023561 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (280)
Q Consensus 16 ~~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~ 92 (280)
||||+++.+++.. +++++.+.|.+.++||+||+.++++|+.|.....+..+. ...|.++|||++|+|+++|+++..+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6899999987753 777788888899999999999999999999888876532 3456789999999999999999999
Q ss_pred CCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCC
Q 023561 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (280)
Q Consensus 93 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 172 (280)
++||+|+... .+ |+|++|++++..+++++|+
T Consensus 81 ~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL------------------------------PG-------------------GGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec------------------------------CC-------------------CceeeEEEecHHHcEeCCC
Confidence 9999996321 11 2899999999999999999
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEE
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi 251 (280)
++++.+++.+.+++.++|.++.+...++++++|+|+|+ |.+|++++++|+++|+ .++++.+++++.+.++++|+++++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998877788999999999997 9999999999999999 666688889999999999999999
Q ss_pred cCCCCCCcc-HHHHHHHhcCC-CceEEE
Q 023561 252 NSKNCGDKS-VSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 252 ~~~~~~~~~-~~~~v~~~~~g-g~~~v~ 277 (280)
++.. .+ +.+.+++.+++ +++.+.
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~d~~i 215 (334)
T PTZ00354 191 RYPD---EEGFAPKVKKLTGEKGVNLVL 215 (334)
T ss_pred ecCC---hhHHHHHHHHHhCCCCceEEE
Confidence 8765 44 77888888877 765544
No 92
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.96 E-value=3.1e-27 Score=206.89 Aligned_cols=204 Identities=31% Similarity=0.457 Sum_probs=175.3
Q ss_pred eEEEEeeeeecChhhhhhhhcCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCC
Q 023561 43 EVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (280)
Q Consensus 43 eVlIkv~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~ 121 (280)
||+||+.++++|+.|+..+.+..+ ....|.++|||++|+|+++|+++..|++||+|+..+...|+.|++|+. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999988764 335678999999999999999999999999999999999999999997 676
Q ss_pred CCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCC
Q 023561 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (280)
Q Consensus 122 ~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~ 201 (280)
.... .+....| +|++|+.++...++++|+++++.+++.+++++.+||.++.....+.+
T Consensus 77 ~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LGEGLDG-------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---eccccCC-------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 6543 3333344 89999999999999999999999999998999999998777666799
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+++|+|+|+|++|++++++++..|. +|+++++++++.+.++++|++++++..+ .++.+.+. .+.+ ++|.++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi 206 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVI 206 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEE
Confidence 9999999995599999999999997 8999999999999999999999988776 66666666 5555 665554
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.96 E-value=7.6e-27 Score=210.68 Aligned_cols=193 Identities=20% Similarity=0.217 Sum_probs=164.5
Q ss_pred eeeeeecCCCC--CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~--~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||++++++++ +++++++|.|.|.++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 68999998886 6999999999999999999999999999999998887543 235788999999999998 456799
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+.... ..|+..+| +|++|+.++.++++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~~~g-------------------~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMNTDG-------------------GFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCCCCc-------------------eeEEEEEEchhhEEECCCC
Confidence 9999975421 02333344 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHc--CCC-CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTA--NVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~--~~~-~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
+++.+++.+.+.+.++|.++.... .+. .+++|+|+|+ |.+|++++++|+.+|+ .|+++++++++++.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999998765443 335 3579999998 9999999999999999 6999999999999999999999
Q ss_pred EEcCCC
Q 023561 250 FVNSKN 255 (280)
Q Consensus 250 vi~~~~ 255 (280)
++++++
T Consensus 195 ~~~~~~ 200 (325)
T cd05280 195 VLDRED 200 (325)
T ss_pred EEcchh
Confidence 988654
No 94
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.96 E-value=9.2e-27 Score=210.03 Aligned_cols=209 Identities=21% Similarity=0.255 Sum_probs=179.1
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG 91 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~ 91 (280)
|||+++++++.+ +++++.+.|.+.++||+||+.++++|++|+....|..+. ...|.++|||++|+|+.+|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 688998876653 667777777789999999999999999999988776432 345788999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcC
Q 023561 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (280)
Q Consensus 92 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 171 (280)
+++||+|+.... ..+ |+|++|+.++..+++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~~~-------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------RAG-------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------CCC-------------------ceeeEEEEEchHHeEeCC
Confidence 999999975321 112 389999999999999999
Q ss_pred CCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 172 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
+++++.+++.+.+.+.|+|. +....+++++++|+|+|+ |.+|.+++++|+.+|+ .|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 99999999999989999964 678889999999999997 9999999999999999 79999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 251 VNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 251 i~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+++.+ .++.+.+.+++++ +++.+.
T Consensus 192 ~~~~~---~~~~~~~~~~~~~~~~d~vl 216 (324)
T cd08244 192 VDYTR---PDWPDQVREALGGGGVTVVL 216 (324)
T ss_pred EecCC---ccHHHHHHHHcCCCCceEEE
Confidence 98876 7788888888887 665554
No 95
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=1.5e-26 Score=209.65 Aligned_cols=206 Identities=26% Similarity=0.281 Sum_probs=176.5
Q ss_pred eeeeeeecCCCC----CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCC
Q 023561 16 QCRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (280)
Q Consensus 16 ~~~a~~~~~~g~----~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~ 90 (280)
.|||+++.+++. ++++++++.|.|.++|++||+.++++|++|+....|..+. ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 389999987664 5999999999999999999999999999999988876543 35688999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEc
Q 023561 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (280)
Q Consensus 91 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 170 (280)
.+++||+|+... .|+|++|+.++...++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999997421 138999999999999999
Q ss_pred CCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 171 P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
|++ ..+++.+.+++.|+|+++.+...+.++++|+|+|+ |.+|.+++++++..|+ .|+++.+++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 34667788899999998877788999999999997 9999999999999999 7888888899999999999999
Q ss_pred EEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 250 FVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 250 vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+++.++ .++.+.+.+..+.+++.+.
T Consensus 188 v~~~~~---~~~~~~~~~~~~~~vd~v~ 212 (329)
T cd08250 188 PINYKT---EDLGEVLKKEYPKGVDVVY 212 (329)
T ss_pred EEeCCC---ccHHHHHHHhcCCCCeEEE
Confidence 988776 6677777766544665444
No 96
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.95 E-value=1.6e-26 Score=208.99 Aligned_cols=211 Identities=15% Similarity=0.159 Sum_probs=169.3
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCC-CCCCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++.+++++ +++++++.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.| +..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 689999988764 8899999999999999999999999999987665321 122458899999999999954 56799
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+..+. ..|...+| +|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSY------------------------DLGVSHHG-------------------GYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEccc------------------------ccCCCCCC-------------------cceeEEEEcHHHeEECCCC
Confidence 9999975421 02222334 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHH--cCC-CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRT--ANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~--~~~-~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
+++.+++.+++...|+|.++... ..+ ..+++|+|+|+ |.+|.+++++|+.+|+ +|+++.+++++.+.++++|+++
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999998865432 233 34789999998 9999999999999999 7899999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 250 FVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 250 vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
++++++ . ..+.+.++++++++.+.
T Consensus 195 v~~~~~---~-~~~~~~~~~~~~~d~vl 218 (326)
T cd08289 195 VIPREE---L-QEESIKPLEKQRWAGAV 218 (326)
T ss_pred EEcchh---H-HHHHHHhhccCCcCEEE
Confidence 998765 3 34556666433665443
No 97
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.95 E-value=2.9e-26 Score=205.87 Aligned_cols=210 Identities=24% Similarity=0.303 Sum_probs=176.0
Q ss_pred eeeeeecCCCC--CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 17 ~~a~~~~~~g~--~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
||++++.+.+. .+++++.+.|.+.++||+||++++++|+.|+....+..+....|.++|||++|+|+++|. ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 57888877664 377778888888999999999999999999999888664445678999999999999995 57999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|+.... .++...+| +|++|+.++...++++|+++
T Consensus 79 Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMG------------------------GMGRTFDG-------------------SYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecC------------------------CCCCCCCc-------------------ccceEEEcCHHHcEeCCCCC
Confidence 999975421 01111223 89999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
++.+++.+.+++.++|.++.+...+.+|++|+|+|+ |.+|.+++++|+.+|+ .|+++..++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999998877788999999999998 9999999999999999 78999889999999999999888754
Q ss_pred CCCCCccHHHHHHHhcCCCceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
. .++.+.++++ +.+++.+.
T Consensus 195 -~---~~~~~~i~~~-~~~~d~vl 213 (320)
T cd08243 195 -D---GAIAEQLRAA-PGGFDKVL 213 (320)
T ss_pred -C---ccHHHHHHHh-CCCceEEE
Confidence 3 4677778877 44765554
No 98
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.95 E-value=2.1e-26 Score=210.25 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=171.4
Q ss_pred eeeeeecCCCCC---cEEEEeecCCCC-CCeEEEEeeeeecChhhhhhhhcCCC---------------CCCCCcccccc
Q 023561 17 CRAAIATAPGEP---LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDF---------------PAVFPRILGHE 77 (280)
Q Consensus 17 ~~a~~~~~~g~~---l~~~~~~~p~~~-~~eVlIkv~~~~i~~~D~~~~~g~~~---------------~~~~p~i~G~e 77 (280)
|||+++++++++ +++++++.|.|. ++||+||+.++++|++|+.+..+... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 688998888875 899999999994 99999999999999999998877421 12458899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceee
Q 023561 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157 (280)
Q Consensus 78 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~ 157 (280)
++|+|+.+|+++.+|++||+|+..+. ...+ |+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~-------------------g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVP---------------------------PWSQ-------------------GTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecC---------------------------CCCC-------------------ccce
Confidence 99999999999999999999975321 0112 3899
Q ss_pred eeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCC----CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEE
Q 023561 158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (280)
Q Consensus 158 ~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~ 232 (280)
+|+.++...++++|+++++.+++.+.+++.|+|.++.+...+.+ |++|+|+|+ |++|.+++++++.+|+ .|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998767666654 999999997 9999999999999999 67777
Q ss_pred cCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 233 ~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
.++ ++.+.++++|++.+++.++ .++.+.+.+. +++|.++
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi 232 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVIL 232 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEE
Confidence 654 6888889999998888765 5555554432 2554443
No 99
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.95 E-value=6e-26 Score=206.05 Aligned_cols=210 Identities=24% Similarity=0.217 Sum_probs=175.4
Q ss_pred eeeeeecCCCCC-----cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023561 17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (280)
Q Consensus 17 ~~a~~~~~~g~~-----l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 91 (280)
|||+++++++++ ++.++++.|.+.++||+||+.++++|++|+..+.+..+....|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 579999988864 666778888889999999999999999999988776553345778999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcC
Q 023561 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (280)
Q Consensus 92 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 171 (280)
|++||+|..... ...+| +|++|+.++..+++++|
T Consensus 81 ~~~Gd~V~~~~~---------------------------~~~~g-------------------~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGD---------------------------ITRPG-------------------SNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCC---------------------------CCCCc-------------------cceEEEEEchHHeeeCC
Confidence 999999974210 01123 89999999999999999
Q ss_pred CCCChhhhcccchhhHHHHHHHHHHcCCCC-----CCEEEEECc-cHHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH
Q 023561 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 172 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~G~-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~ 244 (280)
+++++++++.+++.+.++|.++.+...+.+ |++|+|+|+ |++|.+++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998777788877 999999997 999999999999999 7 89999989999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 245 FGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 245 ~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
+|+++++++++ ++.+.++...+++++.+.
T Consensus 194 ~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl 222 (336)
T cd08252 194 LGADHVINHHQ----DLAEQLEALGIEPVDYIF 222 (336)
T ss_pred cCCcEEEeCCc----cHHHHHHhhCCCCCCEEE
Confidence 99999998753 455566544333665443
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.95 E-value=8.2e-26 Score=204.22 Aligned_cols=207 Identities=17% Similarity=0.154 Sum_probs=167.2
Q ss_pred eeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 18 ~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
||+++.+.+.+ ++++++|.|.+.++||+||+.++++|++|+..+.|..+. ...|.++|||++|+|+. .++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 68888877763 789999999999999999999999999999988886532 34588899999999998 56678999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|+..... .|...+| +|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~~~g-------------------~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVSHDG-------------------GYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCCCCc-------------------cceEEEEEchhheEECCCCC
Confidence 9999754210 1222233 89999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHH--cCCCCCC-EEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 175 PPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~--~~~~~g~-~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
++.+++++.+.+.+++.++... ..+.+++ +|+|+|+ |.+|.+++++|+.+|+ .++++..++++.+.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999998999998765332 3478898 9999998 9999999999999999 67777778888899999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCCCceE
Q 023561 251 VNSKNCGDKSVSQVLLSIYDLPLLT 275 (280)
Q Consensus 251 i~~~~~~~~~~~~~v~~~~~gg~~~ 275 (280)
++.++ .+. .++++++++++.
T Consensus 195 ~~~~~---~~~--~~~~~~~~~~d~ 214 (323)
T TIGR02823 195 IDRED---LSP--PGKPLEKERWAG 214 (323)
T ss_pred Ecccc---HHH--HHHHhcCCCceE
Confidence 88654 322 445555445433
No 101
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.95 E-value=1.3e-25 Score=201.27 Aligned_cols=213 Identities=27% Similarity=0.329 Sum_probs=182.2
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
||++++.+++.+ +++++++.|.+.+++|+|++.++++|++|+....+.... ...|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578888876653 888899999999999999999999999999888775532 34688999999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+..+.. . ....| ++++|+.++...++++|++
T Consensus 81 ~Gd~v~~~~~~------------------------~-~~~~g-------------------~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG------------------------W-GRRQG-------------------TAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc------------------------c-CCCCc-------------------ceeeEEEecHHHcEeCCCC
Confidence 99999754310 0 00123 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+.+++.++|.++....++.+|++++|+|+ |.+|.+++++++..|+ .|+++++++++.+.++++|++.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998777789999999999997 9999999999999999 7999999999999999999999988
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
... .++.+.+.+++.+ +++.+.
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~d~vi 218 (325)
T cd08253 196 YRA---EDLADRILAATAGQGVDVII 218 (325)
T ss_pred CCC---cCHHHHHHHHcCCCceEEEE
Confidence 776 6788888888776 775554
No 102
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.5e-25 Score=201.68 Aligned_cols=210 Identities=26% Similarity=0.380 Sum_probs=180.1
Q ss_pred eeeeeecCCC--CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 17 ~~a~~~~~~g--~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
|||+++.+++ +.+++++++.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|+++..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 6899999988 35999999999999999999999999999999888776533234778999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|+.... +..+| +|++|+.++...++++|+++
T Consensus 81 Gd~V~~~~~---------------------------~~~~~-------------------~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHAS---------------------------LARGG-------------------SFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccC---------------------------CCCCc-------------------cceeEEEeCHHHeEECCCCC
Confidence 999975321 11123 89999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+..+++.+.+++.+++.++.+..++.+|++++|+|+ |.+|++++++++..|+ .++.+. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999998878888999999999998 8999999999999999 677665 6778888888999999987
Q ss_pred CCCCCccHHHHHHHhcCC-CceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.. .++.+.+++.+++ +++.+.
T Consensus 193 ~~---~~~~~~~~~~~~~~~~d~vi 214 (325)
T cd08271 193 ND---EDVCERIKEITGGRGVDAVL 214 (325)
T ss_pred CC---ccHHHHHHHHcCCCCCcEEE
Confidence 76 6777888888777 765554
No 103
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.95 E-value=1.2e-25 Score=200.97 Aligned_cols=208 Identities=25% Similarity=0.321 Sum_probs=179.4
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++.+.+.+ +++++++.|.+.++|++||+.++++|+.|+....+..+. ..+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 689999876543 778888888889999999999999999999888775532 34578999999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL------------------------------AG-------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec------------------------------CC-------------------CceeEEEEcCHHHhccCCCC
Confidence 999996421 11 28999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+..++.++|.++.+...+.++++|+|+|+ |.+|++++++++..|+ .++++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998777788999999999997 9999999999999999 7899998999999999999988888
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
... .++.+.+.+.+.+ +++.++
T Consensus 191 ~~~---~~~~~~~~~~~~~~~~d~vi 213 (323)
T cd05276 191 YRT---EDFAEEVKEATGGRGVDVIL 213 (323)
T ss_pred CCc---hhHHHHHHHHhCCCCeEEEE
Confidence 776 6777888887766 665544
No 104
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.95 E-value=1.7e-25 Score=202.03 Aligned_cols=193 Identities=14% Similarity=0.126 Sum_probs=161.5
Q ss_pred eeeeeecCCCC--CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~--~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++.++|. .++++++|.|.|+++||+||+.++++|++|...+.+.... ...|.++|||++|+|++ +++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 68999998775 4999999999999999999999999999999988776532 23578899999999999 7777899
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+..... .|...+| +|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~~~g-------------------~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG------------------------VGERHWG-------------------GYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc------------------------CCCCCCC-------------------cceeEEEEchHHeeeCCCC
Confidence 99999753210 1111123 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHH--HHcCCC-CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 174 VPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~--~~~~~~-~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
+++.+++.+.+.+.+++.++. +..... ++++|+|+|+ |++|.+++++|+.+|+ +++++..+++|.+.++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999988888887543 234455 5789999998 9999999999999999 7888888999999999999999
Q ss_pred EEcCCC
Q 023561 250 FVNSKN 255 (280)
Q Consensus 250 vi~~~~ 255 (280)
++++++
T Consensus 195 ~~~~~~ 200 (324)
T cd08288 195 IIDRAE 200 (324)
T ss_pred EEEcch
Confidence 998765
No 105
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.95 E-value=4.2e-26 Score=208.14 Aligned_cols=196 Identities=28% Similarity=0.434 Sum_probs=158.8
Q ss_pred cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCC----CCCcccccceeEEEEE---eC-CCCCCCCCCCEEEe
Q 023561 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA----VFPRILGHEAIGVVES---VG-ENVDGVVEGDVVIP 100 (280)
Q Consensus 29 l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~----~~p~i~G~e~~G~V~~---vG-~~v~~~~~Gd~V~~ 100 (280)
...++.++|.|.+++++|++.++++|+.|+.+..|..... .+|.+++.++.|++.. .| ..+.....||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 5557889999999999999999999999999999987642 3565555555444322 23 11223444444421
Q ss_pred cCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhc
Q 023561 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180 (280)
Q Consensus 101 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa 180 (280)
+...|+|+||+++|...++++|+++++.+||
T Consensus 100 -------------------------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 -------------------------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred -------------------------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 1122499999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHc------CCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcC
Q 023561 181 LLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 181 ~l~~~~~ta~~~l~~~~------~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~ 253 (280)
+++.++.|||.++.+.. +.++|+.|||+|+ |++|.+++|+|+..++ ..+++..+++++++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999987 9999999999999996 45555568999999999999999999
Q ss_pred CCCCCccHHHHHHHhcCCCceEEE
Q 023561 254 KNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
++ +++.+.+++.+++++|.|.
T Consensus 210 ~~---~~~~e~~kk~~~~~~DvVl 230 (347)
T KOG1198|consen 210 KD---ENVVELIKKYTGKGVDVVL 230 (347)
T ss_pred CC---HHHHHHHHhhcCCCccEEE
Confidence 98 9999999998844775554
No 106
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.94 E-value=1.5e-25 Score=201.96 Aligned_cols=196 Identities=22% Similarity=0.273 Sum_probs=171.6
Q ss_pred cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCC
Q 023561 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCT 107 (280)
Q Consensus 29 l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~ 107 (280)
+++++.+.|.+.++||+||+.++++|+.|..++.+.... ...|.++|||++|+|+.+|+++..+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 567788888899999999999999999999988776532 345789999999999999999999999999975321
Q ss_pred CChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhcccchhhH
Q 023561 108 ECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187 (280)
Q Consensus 108 ~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ 187 (280)
+ |+|++|+.++...++++|+++++.+++.+.+...
T Consensus 90 --------------------------~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 --------------------------E-------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred --------------------------C-------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 1 2899999999999999999999999999888999
Q ss_pred HHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHH
Q 023561 188 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLL 266 (280)
Q Consensus 188 ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~ 266 (280)
++|.++.....+.+|++|+|+|+ |.+|.+++++|+.+|+ .++++.+++++++.++++|+++++++++ .++.+.+.
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~ 200 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVK 200 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHH
Confidence 99998877778899999999998 9999999999999999 7888888889999999999999999876 67888888
Q ss_pred HhcCC-CceEEE
Q 023561 267 SIYDL-PLLTIS 277 (280)
Q Consensus 267 ~~~~g-g~~~v~ 277 (280)
+++++ +++.+.
T Consensus 201 ~~~~~~~~d~vl 212 (323)
T cd05282 201 EATGGAGARLAL 212 (323)
T ss_pred HHhcCCCceEEE
Confidence 88887 775554
No 107
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.94 E-value=1.6e-25 Score=200.91 Aligned_cols=197 Identities=23% Similarity=0.368 Sum_probs=165.8
Q ss_pred CCCCCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhh-hcCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEEe
Q 023561 24 APGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDVVIP 100 (280)
Q Consensus 24 ~~g~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~-~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 100 (280)
+.+. +++++++.|++.++||+||+.++++|+.|+..+ .+..+. ...|.++|+|++|+|+.+|++++.+++||+|+.
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 999999999999999999999999999999887 665432 124788999999999999999999999999975
Q ss_pred cCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhc
Q 023561 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180 (280)
Q Consensus 101 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa 180 (280)
.. .|+|++|+.++.+.++++|+++ ..++
T Consensus 82 ~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~ 109 (312)
T cd08269 82 LS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQA 109 (312)
T ss_pred ec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhhH
Confidence 31 1289999999999999999998 2333
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCcc
Q 023561 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS 260 (280)
Q Consensus 181 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~ 260 (280)
....++.+++.++. ..+++++++|+|+|+|.+|.+++++|+.+|++.++++.+++++.++++++|++++++.+. .+
T Consensus 110 ~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~ 185 (312)
T cd08269 110 FPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EA 185 (312)
T ss_pred HhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cC
Confidence 32367888888654 788999999999988999999999999999954899998999999999999999998776 77
Q ss_pred HHHHHHHhcCC-CceEEE
Q 023561 261 VSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 261 ~~~~v~~~~~g-g~~~v~ 277 (280)
+.+.+.+++++ +++.+.
T Consensus 186 ~~~~l~~~~~~~~vd~vl 203 (312)
T cd08269 186 IVERVRELTGGAGADVVI 203 (312)
T ss_pred HHHHHHHHcCCCCCCEEE
Confidence 88899998887 775554
No 108
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=3.9e-25 Score=198.67 Aligned_cols=212 Identities=24% Similarity=0.264 Sum_probs=180.2
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++..++.+ +++++.+.|.+.++||+|++.++++|++|..+..+.... ...|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999888765 788888888899999999999999999999988776432 23577899999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+.... + .+ ... |+|++|+.++..+++++|++
T Consensus 81 ~Gd~V~~~~~-----------~-------------~~-~~~-------------------g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG-----------G-------------LG-GLQ-------------------GSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC-----------C-------------cC-CCC-------------------CceeEEEEecHHHcccCCCC
Confidence 9999975321 0 00 012 38999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+++.+.++|.++.+..+++++++++|+|+ |.+|++++++++.+|+ .|+++.++ ++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999899999998888899999999999997 9999999999999999 78888877 8999999999998888
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEEe
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTISV 278 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~~ 278 (280)
... . +.+.+.+++++ +++.+..
T Consensus 195 ~~~---~-~~~~~~~~~~~~~~d~v~~ 217 (326)
T cd08272 195 YRE---T-VVEYVAEHTGGRGFDVVFD 217 (326)
T ss_pred cch---h-HHHHHHHhcCCCCCcEEEE
Confidence 776 5 78888888887 7765543
No 109
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.94 E-value=3.4e-25 Score=203.02 Aligned_cols=212 Identities=19% Similarity=0.246 Sum_probs=168.8
Q ss_pred eeeeecCCCCCcEEEEeecCCC---CCCeEEEEeeeeecChhhhhhhhcCCCCCC-CCcccccceeEEEEEeCCCCC-CC
Q 023561 18 RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRILGHEAIGVVESVGENVD-GV 92 (280)
Q Consensus 18 ~a~~~~~~g~~l~~~~~~~p~~---~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~-~p~i~G~e~~G~V~~vG~~v~-~~ 92 (280)
||+++.+++.++++++++.|.| .++||+||+.++++|++|+..+.+...... .|.++|||++|+|+++|+++. .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888888887776 899999999999999999988754322212 377899999999999999998 89
Q ss_pred CCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecc----cEE
Q 023561 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA----HVV 168 (280)
Q Consensus 93 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 168 (280)
++||+|+......| ... |+|++|++++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~-------------------------~~~-------------------g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY-------------------------GGQ-------------------GTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC-------------------------CCC-------------------ceeeEEEEEccccccceeE
Confidence 99999975432111 012 389999999987 789
Q ss_pred EcCCCCChhhhcccchhhHHHHHHHHHHc-CCCCCCEEEEECc-cHHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHc
Q 023561 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF 245 (280)
Q Consensus 169 ~iP~~ls~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~G~-g~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~ 245 (280)
++|+++++.+++.+++.+.|+|.++.+.. .+++|++|+|+|+ |.+|.+++++|+.++. +.++++. ++++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999876666 7999999999998 8999999999999854 3567765 45556678889
Q ss_pred CCcEEEcCCCCCCcc---HHHHHHHhcC-C-CceEEE
Q 023561 246 GVTEFVNSKNCGDKS---VSQVLLSIYD-L-PLLTIS 277 (280)
Q Consensus 246 Ga~~vi~~~~~~~~~---~~~~v~~~~~-g-g~~~v~ 277 (280)
|+++++++++ .+ +...+.+.+. + +++.+.
T Consensus 197 g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl 230 (352)
T cd08247 197 GADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLIL 230 (352)
T ss_pred CCCEEEecCC---CcccchHHHHHHhhcCCCCceEEE
Confidence 9999998766 33 4455555443 5 665444
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.94 E-value=7.5e-25 Score=195.61 Aligned_cols=207 Identities=27% Similarity=0.311 Sum_probs=177.4
Q ss_pred eeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 18 ~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
||+....++.+ +.+++.+.|.+.++||+||+.++++|++|+....+..+. .+|.++|||++|+|+.+|+++.++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 45666655543 667777777788999999999999999999988776543 457789999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
|+|+... .. |+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG------------------------------PP-------------------GAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec------------------------------CC-------------------CceeEEEEecHHHceeCCCCCC
Confidence 9997421 01 2899999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
..+++.+.+...++|.++.+..++++|++|+|+|+ |++|.+++++++.+|+ .|+++..++++.++++++|++++++.+
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999888899999998877888999999999997 9999999999999999 789998899999999999999999877
Q ss_pred CCCCccHHHHHHHhcCC-CceEEEe
Q 023561 255 NCGDKSVSQVLLSIYDL-PLLTISV 278 (280)
Q Consensus 255 ~~~~~~~~~~v~~~~~g-g~~~v~~ 278 (280)
+ .++.+.+++++++ +++.++.
T Consensus 190 ~---~~~~~~~~~~~~~~~~d~vl~ 211 (320)
T cd05286 190 D---EDFVERVREITGGRGVDVVYD 211 (320)
T ss_pred c---hhHHHHHHHHcCCCCeeEEEE
Confidence 6 7788888888877 7765553
No 111
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=2e-24 Score=193.92 Aligned_cols=213 Identities=28% Similarity=0.321 Sum_probs=179.7
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+++...+.+ +++++++.|.+.+++++|++.++++|+.|.....+.... ...|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 578888775542 777788888889999999999999999999887765432 23477899999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+..+. .++..+| ++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------~~~~~~g-------------------~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPA-------------------------ADLGQYG-------------------TYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccc-------------------------cccCCCc-------------------cceEEEEechHhcEeCCCC
Confidence 9999975432 1111123 8999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+.+++.++|.++.....+.++++++|+|+ |.+|.+++++++..|+ .++.++.++++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877888999999999998 9999999999999999 7888888899999998899988888
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
.+. .++.+.+.+.+.+ +++.+.
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~d~vi 218 (328)
T cd08268 196 TDE---EDLVAEVLRITGGKGVDVVF 218 (328)
T ss_pred cCC---ccHHHHHHHHhCCCCceEEE
Confidence 776 6777888888776 665554
No 112
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=7e-25 Score=196.31 Aligned_cols=181 Identities=24% Similarity=0.280 Sum_probs=155.6
Q ss_pred eeeeeecCCC-CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023561 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (280)
Q Consensus 17 ~~a~~~~~~g-~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 95 (280)
|||+++.+.+ ..+++++.+.|.+.++||+||+.++++|+.|....... ..|.++|||++|+|+++|+++..|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 5788888755 12777799999999999999999999999999876522 236789999999999999999999999
Q ss_pred CEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCC
Q 023561 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (280)
Q Consensus 96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls 175 (280)
|+|+... .+ |+|++|+.++.++++++|++++
T Consensus 77 d~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~~~ 107 (305)
T cd08270 77 ARVVGLG------------------------------AM-------------------GAWAELVAVPTGWLAVLPDGVS 107 (305)
T ss_pred CEEEEec------------------------------CC-------------------cceeeEEEEchHHeEECCCCCC
Confidence 9996421 12 3899999999999999999999
Q ss_pred hhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++++.+++.+.|||+++...... +|++|+|+|+ |++|.+++++++..|+ +++.+++++++++.++++|++.+++
T Consensus 108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 183 (305)
T cd08270 108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVV 183 (305)
T ss_pred HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 999999999999999976555444 5999999998 9999999999999999 7999988999999999999876553
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=1.5e-24 Score=196.31 Aligned_cols=204 Identities=25% Similarity=0.300 Sum_probs=169.6
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
.||+++...+.+ +++++.+.|.|.++||+|++.++++|++|+.++.+..+. ..+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 478888887754 888899999999999999999999999999988876543 24678999999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|..... . |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~ 111 (331)
T cd08273 81 VGDRVAALTR------------------------------V-------------------GGNAEYINLDAKYLVPVPEG 111 (331)
T ss_pred CCCEEEEeCC------------------------------C-------------------cceeeEEEechHHeEECCCC
Confidence 9999974311 1 28999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+.+++.++|.++.+...+.+|++|+|+|+ |.+|.+++++++.+|+ .|+++.. +++.+.++++|+.. ++
T Consensus 112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~ 188 (331)
T cd08273 112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID 188 (331)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence 9999999999999999998777788999999999998 9999999999999999 7888887 88999999999764 44
Q ss_pred CCCCCCccHHHHHHHhcCCCceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
.+. .++.+. +..+++++.+.
T Consensus 189 ~~~---~~~~~~--~~~~~~~d~vl 208 (331)
T cd08273 189 YRT---KDWLPA--MLTPGGVDVVF 208 (331)
T ss_pred CCC---cchhhh--hccCCCceEEE
Confidence 443 333333 33334554443
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.93 E-value=4.7e-24 Score=193.05 Aligned_cols=203 Identities=20% Similarity=0.177 Sum_probs=167.3
Q ss_pred eeeeeecCCC------CCcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC---CCCCcccccceeEEEEEeCC
Q 023561 17 CRAAIATAPG------EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGE 87 (280)
Q Consensus 17 ~~a~~~~~~g------~~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~ 87 (280)
+|||++.+.+ +.+++++++.|++.++||+||+.++++|+.|...+.+.... ...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 5778776533 12889999999999999999999999999887655543211 12346789999999999996
Q ss_pred CCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeec-cc
Q 023561 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AH 166 (280)
Q Consensus 88 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~ 166 (280)
+ .+++||+|+.. ++|++|+.++. ..
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 4 79999999631 16999999999 99
Q ss_pred EEEcCCCCC--hhhhcc-cchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 167 VVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 167 ~~~iP~~ls--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++|++++ +.+++. +.+++.|+|+++.+...+.++++|+|+|+ |.+|.+++++++..|+ .|+++++++++.+.+
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999995 445544 78899999998877788899999999996 9999999999999999 789999899999999
Q ss_pred HH-cCCcEEEcCCCCCCccHHHHHHHhcCCCceEEE
Q 023561 243 KR-FGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 243 ~~-~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
++ +|+++++++++ .++.+.+.++++++++.+.
T Consensus 187 ~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi 219 (329)
T cd05288 187 VEELGFDAAINYKT---PDLAEALKEAAPDGIDVYF 219 (329)
T ss_pred HhhcCCceEEecCC---hhHHHHHHHhccCCceEEE
Confidence 88 99999999876 6788888888755665444
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.93 E-value=9.4e-24 Score=189.35 Aligned_cols=208 Identities=25% Similarity=0.293 Sum_probs=177.0
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 93 (280)
|||+.+...+.+ +++++.+.|.+.+++++||+.++++|+.|.....+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 578888776654 667777777789999999999999999999888765432 23578999999999999999999999
Q ss_pred CCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCC
Q 023561 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (280)
Q Consensus 94 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 173 (280)
+||+|+... .+ |+|++|+.++...++++|++
T Consensus 81 ~Gd~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV------------------------------AG-------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc------------------------------CC-------------------CcceeEEEecHHHcEeCCCC
Confidence 999996421 11 28999999999999999999
Q ss_pred CChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 174 ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
+++.+++.+.+++.++|.++.+...++++++++|+|+ |++|.+++++++.+|+ +++++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998788889999999999997 9999999999999999 7888888999999998899988888
Q ss_pred CCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
... .++.+.+++..++ +++.++
T Consensus 191 ~~~---~~~~~~~~~~~~~~~~d~~i 213 (325)
T TIGR02824 191 YRE---EDFVEVVKAETGGKGVDVIL 213 (325)
T ss_pred cCc---hhHHHHHHHHcCCCCeEEEE
Confidence 766 6788888888776 665444
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.93 E-value=9.5e-24 Score=187.72 Aligned_cols=190 Identities=25% Similarity=0.313 Sum_probs=165.7
Q ss_pred cCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcC
Q 023561 36 VDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRS 114 (280)
Q Consensus 36 ~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~ 114 (280)
.|.+.+++++||+.++++|+.|+....+.++. ..+|.++|+|++|+|+++|+++.++++||+|+....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 57889999999999999999999988876542 346889999999999999999999999999975421
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHH
Q 023561 115 KKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194 (280)
Q Consensus 115 g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~ 194 (280)
... |+|++|+.++.+.++++|++++..+++.++.++.++|.++
T Consensus 71 -----------------~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 71 -----------------ESM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -----------------CCC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 011 3899999999999999999999999999999999999975
Q ss_pred HHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-C
Q 023561 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-P 272 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g 272 (280)
+...+++|++|+|+|+ |.+|.+++++++.+|+ +++++.+++++.+.++++|++.+++... .++.+.+.+++++ +
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~ 189 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRG 189 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCC
Confidence 6788999999999976 9999999999999999 7999998999999999999999998876 7788888888887 6
Q ss_pred ceEEE
Q 023561 273 LLTIS 277 (280)
Q Consensus 273 ~~~v~ 277 (280)
++.+.
T Consensus 190 ~d~v~ 194 (303)
T cd08251 190 VDVVI 194 (303)
T ss_pred ceEEE
Confidence 65443
No 117
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.92 E-value=2.6e-23 Score=185.17 Aligned_cols=191 Identities=25% Similarity=0.349 Sum_probs=162.2
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG 91 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~ 91 (280)
|||+++..++.. +++++.+.|.++++||+||+.++++|++|+..+.+... ....|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888877753 56778888888999999999999999999998877642 2345889999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcC
Q 023561 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (280)
Q Consensus 92 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 171 (280)
+++||+|+..+.. ..+ |+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~---------------------------~~~-------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF---------------------------TRG-------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC---------------------------CCC-------------------CcceeEEEecHHHhccCC
Confidence 9999999754210 012 389999999999999999
Q ss_pred CCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 172 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
+++++.+++.+.+...+++.++.+...+.++++|+|+|+ |.+|++++++++..|+ .++++..++ +.+.++++|++++
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999988899999998776667899999999997 9999999999999999 677777666 8888888999888
Q ss_pred EcCCC
Q 023561 251 VNSKN 255 (280)
Q Consensus 251 i~~~~ 255 (280)
++.+.
T Consensus 193 ~~~~~ 197 (309)
T cd05289 193 IDYTK 197 (309)
T ss_pred EeCCC
Confidence 87765
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.92 E-value=5.8e-23 Score=183.89 Aligned_cols=207 Identities=27% Similarity=0.407 Sum_probs=175.3
Q ss_pred eeeeeecCCCCC--cEEEEeecCCCC-CCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 023561 17 CRAAIATAPGEP--LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (280)
Q Consensus 17 ~~a~~~~~~g~~--l~~~~~~~p~~~-~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~ 92 (280)
|+|+++..++.+ +++.+.+ |.+. ++|++||+.++++|++|+..+.+.... ...|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 578888754433 7777777 7666 499999999999999999988776532 2346689999999999999999999
Q ss_pred CCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCC
Q 023561 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (280)
Q Consensus 93 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 172 (280)
++||+|+..+ .. |+|++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT------------------------------GQ-------------------GGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec------------------------------CC-------------------ceeEEEEEcCHHHceeCCC
Confidence 9999997532 01 2899999999999999999
Q ss_pred CCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEE
Q 023561 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (280)
Q Consensus 173 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi 251 (280)
+++..+++.+..+..++|.++.+..++.++++|+|+|+ |.+|.+++++++..|+ .|++++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999998888899999998777788999999999998 9999999999999999 789998899999999999998888
Q ss_pred cCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 252 NSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+... .++.+.+.+.+++ +++.+.
T Consensus 190 ~~~~---~~~~~~i~~~~~~~~~d~v~ 213 (323)
T cd08241 190 DYRD---PDLRERVKALTGGRGVDVVY 213 (323)
T ss_pred ecCC---ccHHHHHHHHcCCCCcEEEE
Confidence 8776 7788888888877 665554
No 119
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.92 E-value=2.7e-23 Score=180.91 Aligned_cols=193 Identities=23% Similarity=0.255 Sum_probs=159.9
Q ss_pred CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEe--CCCCCCCCCCCEEEecCCCC
Q 023561 28 PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESV--GENVDGVVEGDVVIPHFLAD 105 (280)
Q Consensus 28 ~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~v--G~~v~~~~~Gd~V~~~~~~~ 105 (280)
+|+++++++|+|+++|||||+++.++.+.....++-.. .--.|+-+|....|.++.. -|+.+.|++||.|+...
T Consensus 26 ~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~-SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~--- 101 (340)
T COG2130 26 DFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAP-SYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS--- 101 (340)
T ss_pred CceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCc-ccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc---
Confidence 39999999999999999999999999985544333222 2223566666655554443 26678899999996321
Q ss_pred CCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhh--cccc
Q 023561 106 CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA--CLLS 183 (280)
Q Consensus 106 c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~a--a~l~ 183 (280)
+|++|.+++.+.+.++++..-+..+ ..+.
T Consensus 102 -------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLG 132 (340)
T COG2130 102 -------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLG 132 (340)
T ss_pred -------------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhcC
Confidence 7999999999999999865433333 3466
Q ss_pred hhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCCcEEEcCCCCCCccH
Q 023561 184 CGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSV 261 (280)
Q Consensus 184 ~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga~~vi~~~~~~~~~~ 261 (280)
.+..|||.++++....++|++|+|-++ |++|..+.|+||..|+ +||.+..+++|.+++++ +|.|.+|||+. +++
T Consensus 133 mpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~ 208 (340)
T COG2130 133 MPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDF 208 (340)
T ss_pred CchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccH
Confidence 799999999999999999999999998 9999999999999999 99999999999999998 99999999999 899
Q ss_pred HHHHHHhcCCCceEEE
Q 023561 262 SQVLLSIYDLPLLTIS 277 (280)
Q Consensus 262 ~~~v~~~~~gg~~~v~ 277 (280)
.+.+++.++.|+|..+
T Consensus 209 ~~~L~~a~P~GIDvyf 224 (340)
T COG2130 209 AQALKEACPKGIDVYF 224 (340)
T ss_pred HHHHHHHCCCCeEEEE
Confidence 9999999999987654
No 120
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.91 E-value=5.6e-23 Score=184.41 Aligned_cols=194 Identities=23% Similarity=0.253 Sum_probs=161.4
Q ss_pred EEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC---CCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCC
Q 023561 30 VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADC 106 (280)
Q Consensus 30 ~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c 106 (280)
++++.+.|.|.++||+|+++++++|++|...+.+..+. ...|.++|||++|+|.++|+++..+++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 77888999999999999999999999999988776521 2346789999999999999999999999999754221
Q ss_pred CCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhcccchhh
Q 023561 107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186 (280)
Q Consensus 107 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~ 186 (280)
... |+|++|+.++.+.++++|+++++.+++.+.+++
T Consensus 93 -------------------------~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KGG-------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CCC-------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 011 289999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHH
Q 023561 187 STGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVL 265 (280)
Q Consensus 187 ~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v 265 (280)
.++|+++.....+++|++|+|+|+ |++|++++++|+.+|+ +|+++..+ ++.+.++++|++++++.+. .++.
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~--- 200 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV--- 200 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence 999998777777999999999998 9999999999999999 78888755 8888889999988888765 3332
Q ss_pred HHhcCC-CceEEE
Q 023561 266 LSIYDL-PLLTIS 277 (280)
Q Consensus 266 ~~~~~g-g~~~v~ 277 (280)
++.+.+ ++|.+.
T Consensus 201 ~~~~~~~~~d~vi 213 (319)
T cd08267 201 ALTAGGEKYDVIF 213 (319)
T ss_pred hhccCCCCCcEEE
Confidence 344555 554443
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.91 E-value=1.6e-22 Score=182.77 Aligned_cols=206 Identities=23% Similarity=0.280 Sum_probs=169.6
Q ss_pred eeeeecCCCC--CcEEEEeecCCCCCCeEEEEeeeeecChhhhhhhhcCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 023561 18 RAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (280)
Q Consensus 18 ~a~~~~~~g~--~l~~~~~~~p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 94 (280)
||+++...+. .+++++.+.|.|.++||+||+.++++|++|..++.+.... ...|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4566665553 3778888888889999999999999999999988876532 245778999999999999999999999
Q ss_pred CCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCC
Q 023561 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (280)
Q Consensus 95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~l 174 (280)
||+|+.... + |+|++|+.++...++++|+++
T Consensus 81 G~~V~~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR------------------------------F-------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC------------------------------C-------------------CeeeeEEEecHHHeEECCCCC
Confidence 999974311 1 289999999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
++.+++.+.+++.++|.++.+..++++|++|+|+|+ |.+|.+++++++.+ +. .++.. ..+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999999999999998888889999999999998 99999999999998 33 22222 2456888888899998988
Q ss_pred CCCCCCccHHHHHHHhcCCCceEEE
Q 023561 253 SKNCGDKSVSQVLLSIYDLPLLTIS 277 (280)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~gg~~~v~ 277 (280)
.+. .++.+.+++.++++++.+.
T Consensus 190 ~~~---~~~~~~~~~~~~~~~d~v~ 211 (337)
T cd08275 190 YRT---QDYVEEVKKISPEGVDIVL 211 (337)
T ss_pred CCC---CcHHHHHHHHhCCCceEEE
Confidence 876 7788888888755665444
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.91 E-value=1.2e-22 Score=178.83 Aligned_cols=180 Identities=25% Similarity=0.242 Sum_probs=158.4
Q ss_pred CeEEEEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCC
Q 023561 42 HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (280)
Q Consensus 42 ~eVlIkv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~ 121 (280)
+||+||+.++++|++|+....+..+ ..|.++|||++|+|+++|+++..+++||+|....
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 5899999999999999999887653 4578999999999999999999999999997431
Q ss_pred CCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCC
Q 023561 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (280)
Q Consensus 122 ~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~ 201 (280)
+ |+|++|+.++...++++|+++++.+++.+.++..++|.++.+...+++
T Consensus 60 ------------~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 ------------P-------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred ------------c-------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1 289999999999999999999999999998999999998878789999
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC--CcEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G--a~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
|++|+|+|+ |.+|++++++++.+|+ +++++..++++.+.++++| ++.+++... .++.+.+++++++ +++.+.
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi 184 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVL 184 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEE
Confidence 999999986 9999999999999999 7899988889999999888 788888766 6788888888877 665544
No 123
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=2e-23 Score=160.35 Aligned_cols=108 Identities=35% Similarity=0.541 Sum_probs=95.9
Q ss_pred CCeEEEEeeeeecChhhhhhhhcC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCC
Q 023561 41 SHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNL 119 (280)
Q Consensus 41 ~~eVlIkv~~~~i~~~D~~~~~g~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~ 119 (280)
|+|||||++++|||++|++++.+. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999994 4446789999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEc
Q 023561 120 CSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (280)
Q Consensus 120 c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 170 (280)
|++... +|...+| +|+||++++.++++|+
T Consensus 81 c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 988665 6766777 9999999999999985
No 124
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.89 E-value=8.3e-22 Score=173.37 Aligned_cols=175 Identities=24% Similarity=0.250 Sum_probs=154.2
Q ss_pred EEeeeeecChhhhhhhhcCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCC
Q 023561 46 VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125 (280)
Q Consensus 46 Ikv~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~ 125 (280)
||+.++++|++|+....+.++ .|.++|||++|+|+++|+++..|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 799999999999999887654 367899999999999999999999999997431
Q ss_pred CcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEE
Q 023561 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205 (280)
Q Consensus 126 ~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V 205 (280)
.|+|++|+.++.+.++++|+++++.+++.+.+.+.++|.++.+...+.+|++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 13899999999999999999999999999999999999987788889999999
Q ss_pred EEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC--cEEEcCCCCCCccHHHHHHHhcCC-CceEEE
Q 023561 206 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQVLLSIYDL-PLLTIS 277 (280)
Q Consensus 206 lI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga--~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~ 277 (280)
+|+|+ |.+|++++++++..|+ +|+++++++++++.++++|+ +.++++.+ .++.+.+.+++++ +++.+.
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi 180 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVL 180 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEE
Confidence 99996 9999999999999999 79999989999999999998 78888776 6788888888877 664443
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.77 E-value=9.2e-18 Score=148.53 Aligned_cols=131 Identities=29% Similarity=0.444 Sum_probs=116.3
Q ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceee
Q 023561 69 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148 (280)
Q Consensus 69 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~ 148 (280)
.+|.++|||++|+|+++|+++++|++||+|+...
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------------- 52 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---------------------------------------------- 52 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----------------------------------------------
Confidence 4789999999999999999999999999997421
Q ss_pred cccccceeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCe
Q 023561 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 228 (280)
Q Consensus 149 ~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~ 228 (280)
.|++|+.++.+.++++|+++++.+++.+ +++.++|+++ ...++++|++++|+|+|.+|++++++|+.+|++.
T Consensus 53 ------~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 53 ------PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred ------CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 5899999999999999999999999888 7899999975 5788999999999988999999999999999944
Q ss_pred EEEEcCChhHHHHHHHcC-CcEEEcC
Q 023561 229 IIGVDVISEKFEIGKRFG-VTEFVNS 253 (280)
Q Consensus 229 vi~~~~~~~~~~~~~~~G-a~~vi~~ 253 (280)
|+++++++++.++++++| ++++++.
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~ 150 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAAD 150 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCcccccc
Confidence 999999999999999998 4555543
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.76 E-value=2.3e-16 Score=137.43 Aligned_cols=204 Identities=22% Similarity=0.211 Sum_probs=152.0
Q ss_pred eeeeeeecCC--CC----CcEEE--Eeec-CCCCCCeEEEEeeeeecChhhhhhhhcCCCCC-CCCccccc----ceeEE
Q 023561 16 QCRAAIATAP--GE----PLVID--EVIV-DPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA-VFPRILGH----EAIGV 81 (280)
Q Consensus 16 ~~~a~~~~~~--g~----~l~~~--~~~~-p~~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~-~~p~i~G~----e~~G~ 81 (280)
+.|.+++.++ |- ++.++ +.++ .++++++||||.++.+..+.....+.-..+.. -.|+.+|. .++|+
T Consensus 3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~k 82 (343)
T KOG1196|consen 3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAK 82 (343)
T ss_pred cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEE
Confidence 4556666542 22 24443 3343 34589999999999999887765554333221 11232322 67999
Q ss_pred EEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEE
Q 023561 82 VESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161 (280)
Q Consensus 82 V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (280)
|++. +.+++++||.|.... +|.||.+
T Consensus 83 Vi~S--~~~~~~~GD~v~g~~----------------------------------------------------gWeeysi 108 (343)
T KOG1196|consen 83 VIDS--GHPNYKKGDLVWGIV----------------------------------------------------GWEEYSV 108 (343)
T ss_pred EEec--CCCCCCcCceEEEec----------------------------------------------------cceEEEE
Confidence 9995 557899999994211 6999999
Q ss_pred eecc--cEEEcCC--CCChhhh-cccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 162 LDIA--HVVKVDP--TVPPNRA-CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 162 ~~~~--~~~~iP~--~ls~~~a-a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
+... ..++++. ++++.-. .++..+..|||...++....++|++|+|-|| |.+|.++.|+|+.+|+ .||.+..+
T Consensus 109 i~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS 187 (343)
T KOG1196|consen 109 ITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGS 187 (343)
T ss_pred ecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCC
Confidence 9764 4455554 4444333 2466789999999999999999999999998 9999999999999999 99999999
Q ss_pred hhHHHHHHH-cCCcEEEcCCCCCCccHHHHHHHhcCCCceEE
Q 023561 236 SEKFEIGKR-FGVTEFVNSKNCGDKSVSQVLLSIYDLPLLTI 276 (280)
Q Consensus 236 ~~~~~~~~~-~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~~~v 276 (280)
++|..+++. +|.+..+||.+ +.+..+.++++.+.|+|..
T Consensus 188 ~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~GIDiY 227 (343)
T KOG1196|consen 188 KEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPEGIDIY 227 (343)
T ss_pred hhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCCcceEE
Confidence 999999986 89999999998 3488889999888888654
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.65 E-value=4.1e-16 Score=154.07 Aligned_cols=188 Identities=20% Similarity=0.113 Sum_probs=157.3
Q ss_pred cEEEEeecC--C-CCCCeEEEEeeeeecChhhhhhhhcCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 023561 29 LVIDEVIVD--P-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF-------PRILGHEAIGVVESVGENVDGVVEGDVV 98 (280)
Q Consensus 29 l~~~~~~~p--~-~~~~eVlIkv~~~~i~~~D~~~~~g~~~~~~~-------p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 98 (280)
++..+-|.. . ..++.=+--|-|+.+|+.|+...+|+.+.... ..++|-|++|+- +-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCcEE
Confidence 455554443 2 24566677899999999999999999876433 368999999873 449999
Q ss_pred EecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeecccccceeeeeEEeecccEEEcCCCCChhh
Q 023561 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 178 (280)
Q Consensus 99 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ls~~~ 178 (280)
. |+-+.- ++++-+.++.+++|.+|.+-..++
T Consensus 1499 M------------------------------~mvpAk-------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 M------------------------------GMVPAK-------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred E------------------------------Eeeehh-------------------hhhhhhhcchhhhhhCCcccchhh
Confidence 4 333222 789999999999999999999999
Q ss_pred hcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----cCCcEEEcC
Q 023561 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNS 253 (280)
Q Consensus 179 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~Ga~~vi~~ 253 (280)
|++.+|.++|+|+|+..+...++|+++|||++ |++|.+||..|.+.|+ +|+.+..+.+|++++.+ +-.+.+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 99999999999999999999999999999976 9999999999999999 89999999999999975 445677788
Q ss_pred CCCCCccHHHHHHHhcCC-CceEEEec
Q 023561 254 KNCGDKSVSQVLLSIYDL-PLLTISVS 279 (280)
Q Consensus 254 ~~~~~~~~~~~v~~~~~g-g~~~v~~~ 279 (280)
++ .+|..-++..|.| |++.|.++
T Consensus 1609 Rd---tsFEq~vl~~T~GrGVdlVLNS 1632 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNS 1632 (2376)
T ss_pred cc---ccHHHHHHHHhcCCCeeeehhh
Confidence 77 8999999999999 98888765
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=98.79 E-value=3.3e-08 Score=77.46 Aligned_cols=63 Identities=19% Similarity=0.318 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEEe
Q 023561 212 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTISV 278 (280)
Q Consensus 212 ~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~~ 278 (280)
++|++++|+|+.+|+ +|++++++++|+++++++|+++++++++ .++.+.+++++++ +++.++.
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid 64 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVID 64 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEE
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEE
Confidence 589999999999996 9999999999999999999999999998 8899999999998 7765543
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.19 E-value=6.2e-06 Score=79.13 Aligned_cols=55 Identities=24% Similarity=0.255 Sum_probs=50.1
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE-EcCC
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSK 254 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~ 254 (280)
..++++|+|+|+|.+|+++++.|+.+|+ +|+++|.+++|++.++++|++.+ +|..
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~ 217 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFE 217 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccc
Confidence 4579999999999999999999999999 89999999999999999999854 6654
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=97.51 E-value=0.00041 Score=65.11 Aligned_cols=58 Identities=24% Similarity=0.278 Sum_probs=49.8
Q ss_pred HHHHHHHcC-CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 190 VGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 190 ~~~l~~~~~-~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
+.++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|++.++.+|++
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~ 247 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYE 247 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCE
Confidence 344555544 3689999999999999999999999999 899999999999999988874
No 131
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.51 E-value=3.7e-06 Score=79.25 Aligned_cols=134 Identities=19% Similarity=0.178 Sum_probs=86.7
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeeccc
Q 023561 72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV 151 (280)
Q Consensus 72 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~ 151 (280)
..-|.|+++.+.+|++++++.-+|+ +.+ |+.|..| ++.|.+... .|...++
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE-----~qI-~gQvk~a----~~~a~~~~~---~g~~l~~---------------- 138 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGE-----TQI-LGQVKNA----YKVAQEEKT---VGKVLER---------------- 138 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHHHH----HHHHHHcCC---chHHHHH----------------
Confidence 3568999999999999987744444 444 7878877 333433322 3333333
Q ss_pred ccceeeeeEEeecccEEE---c-CCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCC
Q 023561 152 SVSSFSEYTVLDIAHVVK---V-DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 227 (280)
Q Consensus 152 ~~g~~~~~~~~~~~~~~~---i-P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~ 227 (280)
.|++++.++. .+.. + +..+|...+| ...+.+.....++++|+|+|+|.+|..+++.++..|+.
T Consensus 139 ---lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~ 205 (417)
T TIGR01035 139 ---LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVG 205 (417)
T ss_pred ---HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCC
Confidence 7888877765 2222 2 2222222221 11122334456789999999999999999999999976
Q ss_pred eEEEEcCChhHHH-HHHHcCC
Q 023561 228 RIIGVDVISEKFE-IGKRFGV 247 (280)
Q Consensus 228 ~vi~~~~~~~~~~-~~~~~Ga 247 (280)
+|++++++.++.+ +++++|.
T Consensus 206 ~V~v~~rs~~ra~~la~~~g~ 226 (417)
T TIGR01035 206 KILIANRTYERAEDLAKELGG 226 (417)
T ss_pred EEEEEeCCHHHHHHHHHHcCC
Confidence 8999999988754 5555654
No 132
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.27 E-value=0.00037 Score=63.19 Aligned_cols=82 Identities=22% Similarity=0.240 Sum_probs=63.6
Q ss_pred ccEEEcCCCCChhhhcccchhhHHHHHHHHHHcC---CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHH-H
Q 023561 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-E 240 (280)
Q Consensus 165 ~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~-~ 240 (280)
+..+++|+.++.+.++... +.++++.++..... ..++++|+|+|+|.+|..+++.++..|...|++++++.+|. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4567889999888887755 66677665433222 24789999999999999999999988877899999998765 6
Q ss_pred HHHHcCC
Q 023561 241 IGKRFGV 247 (280)
Q Consensus 241 ~~~~~Ga 247 (280)
+++++|+
T Consensus 218 la~~~g~ 224 (311)
T cd05213 218 LAKELGG 224 (311)
T ss_pred HHHHcCC
Confidence 6667776
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=97.05 E-value=0.0018 Score=62.30 Aligned_cols=50 Identities=26% Similarity=0.280 Sum_probs=46.0
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
.++++|+|+|+|.+|++++++++.+|+ .|++++++.++++.++++|++.+
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v 211 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFL 211 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEE
Confidence 457899999999999999999999999 79999999999999999999753
No 134
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=96.92 E-value=0.0046 Score=54.22 Aligned_cols=83 Identities=22% Similarity=0.254 Sum_probs=55.5
Q ss_pred eeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC
Q 023561 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234 (280)
Q Consensus 155 ~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~ 234 (280)
+|.+|.. +...++.+++++++..+.--. +.. ....+. ....++++||-+|.|. |.+++.+++ .|...|+++|.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 3666544 667789999998888764211 111 111111 1256889999999876 887776554 67767999999
Q ss_pred ChhHHHHHHH
Q 023561 235 ISEKFEIGKR 244 (280)
Q Consensus 235 ~~~~~~~~~~ 244 (280)
++...+.+++
T Consensus 151 s~~~l~~A~~ 160 (250)
T PRK00517 151 DPQAVEAARE 160 (250)
T ss_pred CHHHHHHHHH
Confidence 9987776654
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.82 E-value=0.0082 Score=56.62 Aligned_cols=58 Identities=29% Similarity=0.284 Sum_probs=45.6
Q ss_pred HHHHHHHHcCCC-CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 189 GVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 189 a~~~l~~~~~~~-~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
.|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.|...+...|+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~ 256 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGF 256 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCC
Confidence 445444443544 89999999999999999999999999 89999998877655544443
No 136
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=96.69 E-value=0.0046 Score=60.64 Aligned_cols=56 Identities=20% Similarity=0.246 Sum_probs=46.8
Q ss_pred CCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC---------------------hhHHHHHHHcCCcEEEcCC
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~---------------------~~~~~~~~~~Ga~~vi~~~ 254 (280)
....|++|+|+|+|++|+.+++.++..|+ +|++++.. +.+++.++++|++..++..
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~ 209 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVR 209 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCE
Confidence 35789999999999999999999999999 68888742 3567788899998777643
No 137
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.69 E-value=0.0067 Score=48.06 Aligned_cols=48 Identities=31% Similarity=0.351 Sum_probs=41.5
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cC
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG 246 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G 246 (280)
--++++++|+|+|++|.+++..+...|+++++++.|+.+|.+.+.+ ++
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~ 57 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG 57 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC
Confidence 3568999999999999999999999999889999999988776654 53
No 138
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.59 E-value=0.0043 Score=58.68 Aligned_cols=135 Identities=21% Similarity=0.189 Sum_probs=81.5
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCChhhcCCCCCCCCCCCCCcCCCCCCCCCccccccCCceeeccc
Q 023561 72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV 151 (280)
Q Consensus 72 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~ 151 (280)
..-|||+++-+.+|++++++.-+|..-+ |+.|+.+ + ..|.+... .|...++
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~a---~-~~a~~~g~---~g~~l~~---------------- 140 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKDA---Y-ALAQEAGT---VGTILNR---------------- 140 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHHH---H-HHHHHcCC---chHHHHH----------------
Confidence 4569999999999999988755565433 3333321 1 01111100 1111111
Q ss_pred ccceeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcC---CCCCCEEEEECccHHHHHHHHHHHHcCCCe
Q 023561 152 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGLGSIGLAVAEGARLCGATR 228 (280)
Q Consensus 152 ~~g~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~VlI~G~g~~G~~a~~la~~~g~~~ 228 (280)
.|++. +++|+.+..+.+.. ..+.++++.++..... ..++++|+|+|+|.+|.++++.++..|++.
T Consensus 141 ---lf~~a--------~~~~k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~ 208 (423)
T PRK00045 141 ---LFQKA--------FSVAKRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRK 208 (423)
T ss_pred ---HHHHH--------HHHHhhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCe
Confidence 44443 33344443333322 2245555555432222 367899999999999999999999999888
Q ss_pred EEEEcCChhHHH-HHHHcCC
Q 023561 229 IIGVDVISEKFE-IGKRFGV 247 (280)
Q Consensus 229 vi~~~~~~~~~~-~~~~~Ga 247 (280)
|++++++.++.+ +++++|.
T Consensus 209 V~v~~r~~~ra~~la~~~g~ 228 (423)
T PRK00045 209 ITVANRTLERAEELAEEFGG 228 (423)
T ss_pred EEEEeCCHHHHHHHHHHcCC
Confidence 999999988855 5666764
No 139
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.47 E-value=0.012 Score=55.08 Aligned_cols=56 Identities=32% Similarity=0.334 Sum_probs=45.5
Q ss_pred HHHHHHcC-CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 191 GAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 191 ~~l~~~~~-~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|...++..|+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~ 239 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGF 239 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCC
Confidence 33444444 4689999999999999999999999999 79999988887766666665
No 140
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.44 E-value=0.025 Score=50.91 Aligned_cols=46 Identities=24% Similarity=0.389 Sum_probs=41.3
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
.+++++|+|.|.+|..+++.++.+|+ +|++++++.++.+.++++|+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~ 196 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGL 196 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 68999999999999999999999999 89999999888777776664
No 141
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.43 E-value=0.016 Score=50.22 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=52.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCC----cEEEcCCCCCCccHHHHHHHhcCC-C-
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV----TEFVNSKNCGDKSVSQVLLSIYDL-P- 272 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga----~~vi~~~~~~~~~~~~~v~~~~~g-g- 272 (280)
+++.++|.|+ +++|.+.++.+...|+ +|+.+.|..+|++.+.. ++. ...+|..+ .+.....+..+... |
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4588999999 9999999999999999 99999999999988875 773 23344443 23444445444444 4
Q ss_pred ceEEE
Q 023561 273 LLTIS 277 (280)
Q Consensus 273 ~~~v~ 277 (280)
+|.++
T Consensus 82 iDiLv 86 (246)
T COG4221 82 IDILV 86 (246)
T ss_pred ccEEE
Confidence 44443
No 142
>PRK08017 oxidoreductase; Provisional
Probab=96.34 E-value=0.016 Score=50.14 Aligned_cols=47 Identities=23% Similarity=0.308 Sum_probs=40.8
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
++++|+|+ |++|...++.+...|. +|++++++.++.+.+++.+++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~ 50 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGI 50 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEE
Confidence 57999998 9999999999999999 89999999998888887776543
No 143
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.04 Score=48.62 Aligned_cols=48 Identities=19% Similarity=0.204 Sum_probs=40.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
.+++++|+|+ |++|...++.+...|+ +|+++++++++++.+.+.+++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~ 51 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEA 51 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceE
Confidence 4678999998 9999999988888999 8999999988888777766543
No 144
>PLN02494 adenosylhomocysteinase
Probab=96.13 E-value=0.024 Score=54.00 Aligned_cols=57 Identities=25% Similarity=0.298 Sum_probs=45.2
Q ss_pred HHHHHHHcCC-CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 190 ~~~l~~~~~~-~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
+.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~ 298 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGY 298 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCC
Confidence 4445555454 679999999999999999999999999 89999988877555554444
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=95.99 E-value=0.03 Score=56.19 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=55.6
Q ss_pred eeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc
Q 023561 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (280)
Q Consensus 155 ~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~ 233 (280)
++++|..++...+|.+ +..+.+++..... ......+|+++||+|+ |++|...++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5677777777777766 5555555532100 0122346899999997 9999999999999999 899999
Q ss_pred CChhHHHHHHH
Q 023561 234 VISEKFEIGKR 244 (280)
Q Consensus 234 ~~~~~~~~~~~ 244 (280)
++.++++.+.+
T Consensus 454 r~~~~~~~~~~ 464 (681)
T PRK08324 454 LDEEAAEAAAA 464 (681)
T ss_pred CCHHHHHHHHH
Confidence 99887665543
No 146
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=95.96 E-value=0.18 Score=45.59 Aligned_cols=96 Identities=11% Similarity=0.113 Sum_probs=58.6
Q ss_pred eeeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHHcC---CCCCCEEEEECc-cHHHHHHHHHHH-HcCCCeE
Q 023561 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI 229 (280)
Q Consensus 155 ~~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~VlI~G~-g~~G~~a~~la~-~~g~~~v 229 (280)
.|-+|.++..+..+. +.....++..-+ -+.|.|. +.+-.. .-..+.|+|.++ +-.++..+.+++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~--~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD--PEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC--cchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 566777776554431 111222222222 4455554 433332 233467788887 778887777777 4554488
Q ss_pred EEEcCChhHHHHHHHcCC-cEEEcCCC
Q 023561 230 IGVDVISEKFEIGKRFGV-TEFVNSKN 255 (280)
Q Consensus 230 i~~~~~~~~~~~~~~~Ga-~~vi~~~~ 255 (280)
|.+. ++.+....+++|. ++++.|++
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~ 191 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD 191 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh
Confidence 8886 5667779999998 78888876
No 147
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.054 Score=46.12 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=35.6
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 246 (280)
++++|+|+ |++|...+..+...|+ +|+++++++++.+.+++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 45 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALP 45 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhcc
Confidence 57899998 9999998888888899 8999999887776665544
No 148
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=95.84 E-value=0.052 Score=46.01 Aligned_cols=68 Identities=25% Similarity=0.281 Sum_probs=48.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC---cEEEcCCCC-CCccHHHHHHHhc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV---TEFVNSKNC-GDKSVSQVLLSIY 269 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~-~~~~~~~~v~~~~ 269 (280)
.|.+|||.|+ +++|+..++-....|- .||+++|++++++.++..-. ..+.|..+- ....+.+++++-.
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhC
Confidence 4789999987 8999999888888888 89999999999999987332 344454430 1122555555443
No 149
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.65 E-value=0.088 Score=44.95 Aligned_cols=41 Identities=29% Similarity=0.242 Sum_probs=36.1
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++|+|+|+ |++|..+++.+...|+ +|+.+++++++.+.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~ 45 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRM 45 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4689999998 9999999999999999 899999988877655
No 150
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.59 E-value=0.039 Score=45.32 Aligned_cols=48 Identities=27% Similarity=0.328 Sum_probs=41.3
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
..+|+|+|+|.+|..|+.+++.+|+ +++..+...++++..+..++..+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i 67 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFI 67 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEES
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceE
Confidence 4789999999999999999999999 89999999999998888887544
No 151
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=95.58 E-value=0.084 Score=46.68 Aligned_cols=44 Identities=27% Similarity=0.286 Sum_probs=39.2
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
..+++++|+|+ +++|...+..+...|. ++|.+.|+++|++.+.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~ 48 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAK 48 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHH
Confidence 56789999999 9999999999999999 99999999999887753
No 152
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.089 Score=48.06 Aligned_cols=48 Identities=31% Similarity=0.357 Sum_probs=39.0
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHcCCc
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT 248 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~Ga~ 248 (280)
.++++++|+|+ |++|...++.+...|+ +|+++++++++++.+ ++.|.+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~ 57 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAE 57 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCc
Confidence 35789999998 9999999999999999 799999988876544 345654
No 153
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.52 E-value=0.067 Score=49.75 Aligned_cols=46 Identities=26% Similarity=0.304 Sum_probs=38.2
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV 247 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga 247 (280)
++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.. +|.
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~ 212 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGG 212 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCc
Confidence 34669999999999999999999999 79999998887766643 443
No 154
>PRK05693 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.071 Score=46.83 Aligned_cols=46 Identities=26% Similarity=0.313 Sum_probs=38.5
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcE
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~ 249 (280)
+++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~ 48 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTA 48 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeE
Confidence 57899998 9999999998888999 8999999888877776666543
No 155
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.37 E-value=0.054 Score=52.23 Aligned_cols=50 Identities=26% Similarity=0.264 Sum_probs=42.9
Q ss_pred CCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
++.++++|+|+|.|..|++++.+++..|+ .|+++|..+++.+.++++|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~ 57 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVA 57 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCE
Confidence 35678999999999999999999999999 899999877777767777773
No 156
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.25 E-value=0.11 Score=46.43 Aligned_cols=44 Identities=27% Similarity=0.229 Sum_probs=38.3
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
..+++|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 45689999999999999999999999989999999988766553
No 157
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.21 E-value=0.15 Score=45.65 Aligned_cols=46 Identities=26% Similarity=0.413 Sum_probs=39.3
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
.|++++|+|.|.+|...+..++.+|+ +|+++++++++.+.+.++|.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~ 195 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGL 195 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCC
Confidence 57899999999999999999999999 89999998887665555443
No 158
>PRK06182 short chain dehydrogenase; Validated
Probab=95.18 E-value=0.093 Score=46.04 Aligned_cols=47 Identities=23% Similarity=0.253 Sum_probs=39.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
++++++|+|+ |++|...++.+...|+ +|+++++++++++.+...++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~ 49 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVH 49 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCe
Confidence 3678999998 9999999998888899 899999998887766655553
No 159
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.11 Score=45.05 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=36.5
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
..+++++|+|+ |++|...+..+...|+ +|+++++++++++.+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~ 50 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELR 50 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 45799999998 9999999998888999 8999999887765543
No 160
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.11 Score=45.15 Aligned_cols=46 Identities=30% Similarity=0.317 Sum_probs=37.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~Ga 247 (280)
++++|+|+|+ |++|...++.+...|+ .|+++++++.+.+.. ++++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~ 53 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGG 53 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC
Confidence 5789999998 9999999999988999 889998887766544 34554
No 161
>PRK04148 hypothetical protein; Provisional
Probab=95.15 E-value=0.091 Score=41.58 Aligned_cols=55 Identities=24% Similarity=0.409 Sum_probs=42.1
Q ss_pred HHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEE
Q 023561 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi 251 (280)
+.....++.+++++|.| .|...+..+..+|. .|+++|.+++..+.+++.+.+.+.
T Consensus 10 ~~~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~ 64 (134)
T PRK04148 10 ENYEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFV 64 (134)
T ss_pred HhcccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEE
Confidence 33344567899999998 77655555557898 999999999999999888775443
No 162
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.15 Score=43.94 Aligned_cols=43 Identities=19% Similarity=0.155 Sum_probs=35.7
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 246 (280)
++++|.|+ |++|...+..+...|+ +|+++++++++++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~ 45 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQS 45 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc
Confidence 57899998 9999988888888899 7999999988877766543
No 163
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.12 Score=45.39 Aligned_cols=44 Identities=32% Similarity=0.320 Sum_probs=36.1
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HcC
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG 246 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G 246 (280)
+++++|+|+ |++|...++.+...|+ +|+++++++++++.+. +++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc
Confidence 679999998 9999999888888899 7888888888776543 354
No 164
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.01 E-value=0.15 Score=45.40 Aligned_cols=46 Identities=24% Similarity=0.083 Sum_probs=38.9
Q ss_pred CCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
....+++++|+|+|+.+.+++..+...|++++.++.|+.+|.+.+.
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la 163 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA 163 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 4455679999999999999999999999988999999988766553
No 165
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.00 E-value=0.19 Score=48.10 Aligned_cols=80 Identities=23% Similarity=0.347 Sum_probs=51.3
Q ss_pred cEEEcCCCCChhhhc-ccchhhHHHHHHHHHHcC-CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 166 HVVKVDPTVPPNRAC-LLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 166 ~~~~iP~~ls~~~aa-~l~~~~~ta~~~l~~~~~-~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
.++.+|+...-..+- .+.+..+ .+..+.+..+ .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+.
T Consensus 217 PV~nv~d~~tk~~aD~~~G~~~s-~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~ 294 (476)
T PTZ00075 217 PAINVNDSVTKSKFDNIYGCRHS-LIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAA 294 (476)
T ss_pred eEEEeCCcchHHHHHHHHHHHHH-HHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHH
Confidence 355666654433221 1222222 2233444433 4578999999999999999999999999 8999988766654333
Q ss_pred HcCC
Q 023561 244 RFGV 247 (280)
Q Consensus 244 ~~Ga 247 (280)
..|+
T Consensus 295 ~~G~ 298 (476)
T PTZ00075 295 MEGY 298 (476)
T ss_pred hcCc
Confidence 3443
No 166
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.95 E-value=0.12 Score=46.14 Aligned_cols=46 Identities=33% Similarity=0.291 Sum_probs=40.3
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
..++++++|+|+|+.+.+++..++..|+.+++++.|+.+|.+.+.+
T Consensus 123 ~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 123 DVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 3468999999999999999999999998899999999988776653
No 167
>PRK07060 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.23 Score=42.51 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=38.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCCc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT 248 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga~ 248 (280)
++++++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+..
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~ 56 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE 56 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe
Confidence 5689999998 9999999999999999 79999988877665544 4543
No 168
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=94.88 E-value=0.076 Score=46.92 Aligned_cols=48 Identities=33% Similarity=0.529 Sum_probs=40.2
Q ss_pred HcCCCCCCEEEEECccHHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHH
Q 023561 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR 244 (280)
Q Consensus 196 ~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~ 244 (280)
...+++|++||.+|.|. |..+..+++..+.. +|+++|.+++.++.+++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~ 120 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARA 120 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHH
Confidence 35688999999999877 88888888887753 79999999998888875
No 169
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.15 Score=44.21 Aligned_cols=47 Identities=28% Similarity=0.266 Sum_probs=38.6
Q ss_pred cCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 197 ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 197 ~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
...-+++++||+|+ |.+|...+..+...|+ +|+.++++++..+.+.+
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~ 53 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAA 53 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 34457799999998 9999999999889999 79999988776665544
No 170
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.86 E-value=0.26 Score=41.75 Aligned_cols=47 Identities=34% Similarity=0.483 Sum_probs=40.3
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV 247 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga 247 (280)
-.|++++|+|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +|+
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 467899999999999999999999999 88999999887776654 465
No 171
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=94.80 E-value=0.16 Score=44.31 Aligned_cols=43 Identities=28% Similarity=0.307 Sum_probs=36.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
++++++|+|+ +++|...++.+...|+ +|+++++++++.+.+.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~ 48 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQ 48 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 5789999998 9999999988888999 79999998887766654
No 172
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.79 E-value=0.14 Score=45.80 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=37.7
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
..+++++|+|+|+.+.+++..+...|+++++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 45789999999999999998888899989999999988766654
No 173
>PRK06196 oxidoreductase; Provisional
Probab=94.78 E-value=0.18 Score=45.37 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=34.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|+|+ |++|...+..+...|+ +|++++++.++.+.+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~ 66 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREA 66 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 5789999998 9999999888888999 889999887776544
No 174
>PRK08339 short chain dehydrogenase; Provisional
Probab=94.70 E-value=0.19 Score=44.01 Aligned_cols=42 Identities=21% Similarity=0.238 Sum_probs=35.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+++++||.|+ +++|...++.+...|+ +|+++++++++++.+.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~ 49 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAR 49 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 5789999998 9999999999989999 8999999877765443
No 175
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.70 E-value=0.26 Score=42.24 Aligned_cols=41 Identities=32% Similarity=0.342 Sum_probs=34.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|+|+ |++|...++.+...|. +|+.+++++++.+.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~ 45 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEA 45 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4789999998 9999999999988999 799999887665443
No 176
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.67 E-value=0.094 Score=46.87 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=37.3
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|+|+|+.+.+++..+...|+++++++.|+.+|.+.+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~L 165 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRL 165 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 578999999999999999999999998999999998876555
No 177
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.27 Score=42.10 Aligned_cols=46 Identities=28% Similarity=0.317 Sum_probs=37.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~Ga 247 (280)
++++++|.|+ |++|...++.+...|+ +|+++++++++.+.+. +++.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~ 52 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGE 52 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCC
Confidence 4789999998 9999999999999999 8999998877655443 4565
No 178
>PRK07904 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.29 Score=42.57 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=31.5
Q ss_pred CCCCCEEEEECc-cHHHHHHHHHHHHc-CCCeEEEEcCChhH
Q 023561 199 VEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK 238 (280)
Q Consensus 199 ~~~g~~VlI~G~-g~~G~~a~~la~~~-g~~~vi~~~~~~~~ 238 (280)
+..+++++|.|+ |++|...++-+... |+ +|+++++++++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~ 45 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDP 45 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcch
Confidence 456789999998 99999988776666 47 88888887764
No 179
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.25 Score=42.72 Aligned_cols=41 Identities=24% Similarity=0.214 Sum_probs=34.1
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
.++++++|.|+ |++|...++.+...|++.|++++++.++.+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE 45 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH
Confidence 35789999998 999999999998999954999998866554
No 180
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.56 E-value=0.21 Score=44.46 Aligned_cols=44 Identities=25% Similarity=0.178 Sum_probs=37.8
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
..+++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+.
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~ 164 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELA 164 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 46789999999999999999999999769999999988765553
No 181
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.50 E-value=0.17 Score=43.73 Aligned_cols=42 Identities=24% Similarity=0.166 Sum_probs=35.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
.++++||+|+ +++|...+..+...|+ +|+.++++.++.+.+.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~ 50 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLA 50 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHH
Confidence 5789999998 9999999998888999 8999998877665543
No 182
>PRK07831 short chain dehydrogenase; Provisional
Probab=94.50 E-value=0.2 Score=43.64 Aligned_cols=43 Identities=28% Similarity=0.358 Sum_probs=35.4
Q ss_pred CCCCCEEEEECc-c-HHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 199 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 199 ~~~g~~VlI~G~-g-~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+.++++++|+|+ | ++|...++.+...|+ +|+++++++++++..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~ 58 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGET 58 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 345789999997 6 799999999999999 788888887765544
No 183
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=94.45 E-value=0.13 Score=42.52 Aligned_cols=46 Identities=41% Similarity=0.532 Sum_probs=37.4
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 246 (280)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++...........+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~ 79 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFG 79 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccc
Confidence 458999999999999999999999999 9999998876655333333
No 184
>PRK08265 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.21 Score=43.53 Aligned_cols=46 Identities=28% Similarity=0.326 Sum_probs=37.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~Ga 247 (280)
.+++++|.|+ |++|...+..+...|+ +|++++++.++.+.+ ++++.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~ 52 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGE 52 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC
Confidence 4689999998 9999999988888999 899999987765544 34553
No 185
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.39 E-value=0.22 Score=42.57 Aligned_cols=77 Identities=21% Similarity=0.123 Sum_probs=53.1
Q ss_pred CCCCEEEEECc--cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HcCC-cEEEcCCCC-CCccHHHHHHHhcCCCce
Q 023561 200 EVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV-TEFVNSKNC-GDKSVSQVLLSIYDLPLL 274 (280)
Q Consensus 200 ~~g~~VlI~G~--g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~Ga-~~vi~~~~~-~~~~~~~~v~~~~~gg~~ 274 (280)
...+.|||.|. |++|.+.+.-...-|+ .|+++.+.-++...+. ++|. ..-+|..+. +...+...++..++|.+|
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 34578999974 9999998888888899 9999999999888887 6886 334454431 112234445555556665
Q ss_pred EEE
Q 023561 275 TIS 277 (280)
Q Consensus 275 ~v~ 277 (280)
.+.
T Consensus 84 ~L~ 86 (289)
T KOG1209|consen 84 LLY 86 (289)
T ss_pred EEE
Confidence 544
No 186
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.34 E-value=0.2 Score=43.66 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=36.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
++++++|.|+ |++|...++.+...|+ +|+++++++++.+.+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~ 47 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEA 47 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh
Confidence 4789999998 9999999988888999 89999988877766654
No 187
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.17 E-value=0.39 Score=39.52 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=48.1
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCEEEEECccH-HHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHHcCCcEEEcCC
Q 023561 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSK 254 (280)
Q Consensus 180 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~-~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~Ga~~vi~~~ 254 (280)
...+|....+...+.....--.+++|+|+|+|. +|..++..++..|+ +|.++.++.+.+. .+ ..+|-+|+..
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~l~~~l--~~aDiVIsat 95 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKNLKEHT--KQADIVIVAV 95 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchhHHHHH--hhCCEEEEcC
Confidence 445555555555343344456889999999986 59989999999999 7888887754332 33 3356666544
No 188
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.12 E-value=0.22 Score=43.00 Aligned_cols=41 Identities=29% Similarity=0.306 Sum_probs=34.4
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+++++|.|+ |++|...++.+...|+ +|+++++++++.+.+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~ 42 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAK 42 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 478999998 9999999999888999 8999998877655443
No 189
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=94.10 E-value=0.35 Score=41.53 Aligned_cols=35 Identities=26% Similarity=0.436 Sum_probs=30.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.+++++|.|+ |++|...+..+...|+ +|+++++++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~ 39 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSE 39 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCch
Confidence 5789999998 9999999988888999 888888765
No 190
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.06 E-value=0.18 Score=48.40 Aligned_cols=52 Identities=27% Similarity=0.402 Sum_probs=42.7
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHHcCCcEEEcC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~---------------------~~~~~~~~~Ga~~vi~~ 253 (280)
.+++|+|+|+|+.|+.++..++..|. .|++++..+ ...++++++|++..++.
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~ 212 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNC 212 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCC
Confidence 57899999999999999999999999 788887653 34677788998766654
No 191
>PRK05866 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.29 Score=43.68 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=34.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|+|+ |++|...++.+...|+ +|++++++.++++.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~ 80 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAV 80 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence 3588999998 9999999988888899 899999988776554
No 192
>PRK06953 short chain dehydrogenase; Provisional
Probab=94.03 E-value=0.42 Score=40.45 Aligned_cols=45 Identities=24% Similarity=0.290 Sum_probs=36.9
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~ 248 (280)
++++|+|+ |++|...++.+...|+ +|+.++++.++.+.++..+..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~ 47 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAE 47 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccce
Confidence 47899998 9999998887777899 789999988887777766653
No 193
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.03 E-value=0.29 Score=42.81 Aligned_cols=36 Identities=28% Similarity=0.231 Sum_probs=29.2
Q ss_pred CCCCEEEEECc-c--HHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 200 EVGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 200 ~~g~~VlI~G~-g--~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
-.|++++|.|+ + ++|.+.++.+...|+ +|+..++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~ 44 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSE 44 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCch
Confidence 35789999998 4 799998888888899 788877764
No 194
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.00 E-value=0.27 Score=44.09 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=32.2
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
..+++++|+|+|++|.+++..+...|+++|+++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4578999999999999988888889997799999885
No 195
>PRK09291 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.37 Score=41.56 Aligned_cols=41 Identities=22% Similarity=0.214 Sum_probs=34.1
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
++++||+|+ |++|...++.+...|+ +|+++.+++++.+.++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~ 43 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALR 43 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 468999998 9999999999999999 8888888876655443
No 196
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.94 E-value=0.46 Score=41.04 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=33.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
+++++||.|+ |.+|...+..+...|. +|+++++++++.+.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~ 46 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANA 46 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Confidence 4789999998 9999999988888999 78888888765443
No 197
>PRK07814 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.18 Score=44.05 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=35.1
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++||.|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~ 50 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEV 50 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 5789999998 9999999998888999 899999987765544
No 198
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=93.88 E-value=0.65 Score=37.87 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=33.2
Q ss_pred EEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 205 VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc
Confidence 789998 9999999999999997 89999999998776
No 199
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=93.87 E-value=0.36 Score=40.34 Aligned_cols=43 Identities=28% Similarity=0.265 Sum_probs=35.1
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
.++.+++|+|+ |.+|...+..+...|. +|+++.++.++.+.+.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~ 69 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAA 69 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHH
Confidence 36789999997 9999988888888887 8888898887765543
No 200
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.31 Score=42.56 Aligned_cols=41 Identities=27% Similarity=0.347 Sum_probs=34.6
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.++++++|.|+ |++|...++.+...|+ +|+.+++++++.+.
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~ 48 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDA 48 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 36789999998 9999999988888999 79999988766543
No 201
>PRK06841 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.28 Score=42.27 Aligned_cols=44 Identities=30% Similarity=0.346 Sum_probs=36.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 245 (280)
+++++||+|+ |++|...++.+...|+ +|+.++++++..+...++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~ 58 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQL 58 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh
Confidence 4789999998 9999998888888999 799999887766555553
No 202
>PRK07109 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.54 Score=42.89 Aligned_cols=42 Identities=26% Similarity=0.205 Sum_probs=35.3
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
-.+++++|+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~ 48 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEAL 48 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence 34689999998 9999999998888999 889899988776543
No 203
>PRK06180 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.3 Score=43.01 Aligned_cols=43 Identities=23% Similarity=0.210 Sum_probs=36.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
.++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~ 46 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEA 46 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHh
Confidence 3578999998 9999999988888899 89999998887766655
No 204
>PRK06125 short chain dehydrogenase; Provisional
Probab=93.82 E-value=0.54 Score=40.77 Aligned_cols=41 Identities=29% Similarity=0.283 Sum_probs=34.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|.|+ +++|...++.+...|+ +|+++++++++.+.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~ 47 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEAL 47 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 4789999998 9999999988888999 899999887766543
No 205
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=93.82 E-value=0.65 Score=41.79 Aligned_cols=75 Identities=19% Similarity=0.183 Sum_probs=53.6
Q ss_pred HHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEcCCCCC-CccHHHHHHHhc
Q 023561 194 WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNSKNCG-DKSVSQVLLSIY 269 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~~~~~~-~~~~~~~v~~~~ 269 (280)
.....+++|.+| |-+. |..|+..+.+++..|.+-++++.. +.+|.++++.+|+.-++.+.... -....++++++.
T Consensus 54 e~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~ 132 (300)
T COG0031 54 EKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELA 132 (300)
T ss_pred HHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHH
Confidence 455668999854 5565 999999999999999966666643 56899999999998887766311 133455544443
No 206
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.82 E-value=0.29 Score=43.15 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=30.2
Q ss_pred CCCEEEEECc-c--HHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 201 ~g~~VlI~G~-g--~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
+++++||+|+ + ++|.+.++.+...|+ +|+.++++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~ 44 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEA 44 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchH
Confidence 5789999998 4 899999988888999 7888877653
No 207
>PRK05872 short chain dehydrogenase; Provisional
Probab=93.77 E-value=0.19 Score=44.86 Aligned_cols=45 Identities=27% Similarity=0.383 Sum_probs=37.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HcC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG 246 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G 246 (280)
+++++||+|+ |++|...++.+...|+ +|+++++++++++.+. +++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~ 54 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELG 54 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc
Confidence 5789999998 9999999999999999 8999999888766543 354
No 208
>PRK08267 short chain dehydrogenase; Provisional
Probab=93.77 E-value=0.47 Score=41.12 Aligned_cols=41 Identities=22% Similarity=0.143 Sum_probs=34.6
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~ 43 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAA 43 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH
Confidence 57999998 9999999988888898 89999988887766543
No 209
>PRK07326 short chain dehydrogenase; Provisional
Probab=93.74 E-value=0.32 Score=41.42 Aligned_cols=41 Identities=24% Similarity=0.262 Sum_probs=34.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~ 46 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEA 46 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHH
Confidence 4689999998 9999999888888899 799999888766544
No 210
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.73 E-value=0.33 Score=42.29 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=30.4
Q ss_pred CCCEEEEECcc---HHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~g---~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.+++++|.|++ ++|...++.+...|+ +|++++++++.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~ 48 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKA 48 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhh
Confidence 57899999973 899999988888999 78888877543
No 211
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.72 E-value=0.2 Score=43.03 Aligned_cols=41 Identities=27% Similarity=0.300 Sum_probs=34.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++||+|+ |.+|...++.+...|. +|+++++++++.+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~ 45 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERV 45 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4679999998 9999999888888899 799999988766554
No 212
>PRK08264 short chain dehydrogenase; Validated
Probab=93.65 E-value=0.48 Score=40.37 Aligned_cols=41 Identities=24% Similarity=0.264 Sum_probs=34.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+++++|+|+ |.+|...+..+...|.++|++++++.++.+.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~ 46 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD 46 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence 4678999998 9999999998888998678999888766543
No 213
>PRK09072 short chain dehydrogenase; Provisional
Probab=93.64 E-value=0.5 Score=41.10 Aligned_cols=42 Identities=36% Similarity=0.439 Sum_probs=35.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
++++++|+|+ |++|...+..+...|+ +|+++++++++.+.+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~ 46 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALA 46 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence 4678999998 9999999888888999 7999999887766554
No 214
>PRK12939 short chain dehydrogenase; Provisional
Probab=93.62 E-value=0.58 Score=40.01 Aligned_cols=42 Identities=21% Similarity=0.206 Sum_probs=34.7
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.++++++|+|+ |++|...+..+...|+ +|+++++++++.+..
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~ 47 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEAREL 47 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 35789999998 9999999988888999 788888887755443
No 215
>PRK06484 short chain dehydrogenase; Validated
Probab=93.61 E-value=0.4 Score=46.23 Aligned_cols=47 Identities=21% Similarity=0.294 Sum_probs=38.7
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV 247 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~Ga 247 (280)
..+++++|+|+ +++|...++.+...|+ +|+.++++.++++.+. ++|.
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~ 51 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGP 51 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC
Confidence 35789999998 9999999999999999 8999998888766554 4654
No 216
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.36 Score=42.23 Aligned_cols=40 Identities=28% Similarity=0.324 Sum_probs=34.0
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
+++++||.|+ |.+|...++.+...|+ +|+.+++++++.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~ 46 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAA 46 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 4689999998 9999999999998999 89999988766443
No 217
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.58 E-value=0.62 Score=40.35 Aligned_cols=46 Identities=28% Similarity=0.399 Sum_probs=34.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~Ga 247 (280)
++++++|.|+ +++|...++.+...|+ +|+++++++. ..+.+++.+.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~ 55 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGR 55 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 7888876542 2233344554
No 218
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=93.55 E-value=0.23 Score=42.97 Aligned_cols=40 Identities=30% Similarity=0.388 Sum_probs=34.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~ 49 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAA 49 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Confidence 5789999998 9999999988888899 89999988766543
No 219
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.54 E-value=0.32 Score=43.66 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=31.3
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
..+++++|+|+|+.+.+++..+...|+++++++.|++
T Consensus 122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3668999999998898877777778998999999984
No 220
>PRK12742 oxidoreductase; Provisional
Probab=93.52 E-value=0.71 Score=39.21 Aligned_cols=47 Identities=23% Similarity=0.217 Sum_probs=34.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH-HHcCCc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVT 248 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~~Ga~ 248 (280)
+++++||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+ .++++.
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~ 54 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGAT 54 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCe
Confidence 4789999998 9999999999988999 6766644 44444443 446654
No 221
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=93.51 E-value=0.41 Score=45.20 Aligned_cols=50 Identities=18% Similarity=0.160 Sum_probs=40.9
Q ss_pred cCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HcC
Q 023561 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG 246 (280)
Q Consensus 197 ~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G 246 (280)
.....+++|+|+|+|.+|.+++..+...|+..++++.++.+|.+.+. +++
T Consensus 176 ~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~ 226 (414)
T PRK13940 176 LDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR 226 (414)
T ss_pred hcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc
Confidence 34456889999999999999999999999889999999987755544 455
No 222
>PRK05717 oxidoreductase; Validated
Probab=93.42 E-value=0.4 Score=41.46 Aligned_cols=47 Identities=23% Similarity=0.251 Sum_probs=36.0
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV 247 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~Ga 247 (280)
.+|++++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++.
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~ 56 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGE 56 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 35789999998 9999998888888898 888888776654443 34543
No 223
>PRK06484 short chain dehydrogenase; Validated
Probab=93.40 E-value=0.48 Score=45.68 Aligned_cols=47 Identities=30% Similarity=0.273 Sum_probs=39.1
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV 247 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga 247 (280)
..++++||.|+ +++|...++.+...|+ +|+.+++++++++.+.+ ++.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~ 315 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGD 315 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC
Confidence 35789999998 9999999988888999 89999998887776654 554
No 224
>PRK05876 short chain dehydrogenase; Provisional
Probab=93.39 E-value=0.74 Score=40.60 Aligned_cols=42 Identities=31% Similarity=0.265 Sum_probs=34.6
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
-++++++|+|+ |++|...+..+...|+ +|+++++++++++.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~ 46 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQA 46 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 35789999998 9999999988888999 788888887665543
No 225
>PRK07478 short chain dehydrogenase; Provisional
Probab=93.37 E-value=0.41 Score=41.34 Aligned_cols=41 Identities=22% Similarity=0.198 Sum_probs=34.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|.|+ |++|...+..+...|+ +|+.+++++++++.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~ 46 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQL 46 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4689999998 9999999988888999 799999887766544
No 226
>PRK07454 short chain dehydrogenase; Provisional
Probab=93.32 E-value=0.52 Score=40.26 Aligned_cols=42 Identities=21% Similarity=0.125 Sum_probs=35.1
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
...++++|.|+ |.+|...+..+...|. +|+++++++++.+.+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 46 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEAL 46 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 45678999998 9999999988888999 899999987765444
No 227
>PRK07062 short chain dehydrogenase; Provisional
Probab=93.32 E-value=0.25 Score=43.04 Aligned_cols=41 Identities=27% Similarity=0.251 Sum_probs=35.1
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|.|+ +++|...++.+...|+ +|+++++++++++.+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~ 48 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASA 48 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 5789999998 9999999999888999 799999988766543
No 228
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=93.31 E-value=0.21 Score=48.87 Aligned_cols=47 Identities=13% Similarity=0.101 Sum_probs=39.5
Q ss_pred HHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
...+.+.|+++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 3456778999999998 9999999988888999 889999988876543
No 229
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.25 E-value=0.56 Score=41.15 Aligned_cols=41 Identities=20% Similarity=0.085 Sum_probs=33.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.++++||+|+ |.+|...+..+...|+ +|++++++.++.+..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 43 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENL 43 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHH
Confidence 3578999998 9999999988888899 888888887765544
No 230
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.23 E-value=0.46 Score=40.70 Aligned_cols=41 Identities=27% Similarity=0.225 Sum_probs=34.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++||+|+ |.+|...+..+...|. +|+.++++.++.+.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~ 43 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKV 43 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHH
Confidence 4689999998 9999999988888899 888888887665444
No 231
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.20 E-value=0.25 Score=49.41 Aligned_cols=52 Identities=29% Similarity=0.312 Sum_probs=41.1
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHHcCCcEEEc
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVN 252 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~Ga~~vi~ 252 (280)
..+++|+|+|+|+.|+.++..++..|. .|++++..+. ..+.++++|++...+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~ 397 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELN 397 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECC
Confidence 357899999999999999999999999 7888886532 356667788754443
No 232
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=93.17 E-value=0.69 Score=36.79 Aligned_cols=48 Identities=35% Similarity=0.432 Sum_probs=37.3
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHHcCC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGV 247 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~Ga 247 (280)
..+.+++|+|.|.+|...++.+...|...|++++++.++.+. .++++.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~ 65 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE 65 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 557899999999999999988888875489999998877654 344443
No 233
>PRK12828 short chain dehydrogenase; Provisional
Probab=93.15 E-value=0.26 Score=41.76 Aligned_cols=37 Identities=30% Similarity=0.284 Sum_probs=32.1
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
+++++||+|+ |.+|...++.+...|+ +|++++++.++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~ 43 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAP 43 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHh
Confidence 4789999998 9999999988888899 79999887655
No 234
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=93.14 E-value=0.55 Score=40.61 Aligned_cols=43 Identities=28% Similarity=0.366 Sum_probs=35.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
.++++||.|+ |++|...+..+...|+ +|+.++++.++.+.+.+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~ 48 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAAL 48 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH
Confidence 4678999998 9999999988888999 89999998877655443
No 235
>PRK08862 short chain dehydrogenase; Provisional
Probab=93.14 E-value=0.52 Score=40.40 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=34.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+|++++|.|+ +++|...+..+...|+ +|+.+++++++++.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~ 45 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDT 45 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence 4789999998 8999998888888999 789999888776543
No 236
>PRK07024 short chain dehydrogenase; Provisional
Probab=93.14 E-value=0.53 Score=40.83 Aligned_cols=41 Identities=24% Similarity=0.150 Sum_probs=34.4
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+++++|+|+ |++|...+..+...|+ +|++++++.++++...
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~ 43 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFA 43 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 468999998 9999998888888899 8999999887766543
No 237
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.14 E-value=0.27 Score=49.03 Aligned_cols=53 Identities=25% Similarity=0.319 Sum_probs=43.7
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHHcCCcEEEcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~Ga~~vi~~~ 254 (280)
.+++|+|+|+|+.|+.++..++..|. .|++++..+. +.++++++|++..++..
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~ 382 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCE 382 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCc
Confidence 48999999999999999999999999 7888876652 56777889987666653
No 238
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.13 E-value=0.27 Score=42.07 Aligned_cols=41 Identities=27% Similarity=0.310 Sum_probs=34.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHH
Confidence 4689999998 9999999988888999 899999988766544
No 239
>PRK07890 short chain dehydrogenase; Provisional
Probab=93.12 E-value=0.3 Score=42.19 Aligned_cols=43 Identities=23% Similarity=0.305 Sum_probs=35.7
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
-++++++|.|+ |++|...+..+...|+ +|+++++++++.+.+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~ 46 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVA 46 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 35789999998 9999999988889999 8999998877655443
No 240
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=93.11 E-value=0.45 Score=41.20 Aligned_cols=40 Identities=38% Similarity=0.417 Sum_probs=32.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++++++|.|+ |++|...++.+...|+ +|+++++++...+.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~ 47 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEV 47 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHH
Confidence 4689999998 9999999988888999 88889887543333
No 241
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=93.05 E-value=0.53 Score=40.64 Aligned_cols=36 Identities=33% Similarity=0.379 Sum_probs=32.5
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCC--eEEEEcCC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~--~vi~~~~~ 235 (280)
-++.+++|+|+|+.|...+..+...|++ ++++++++
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 4568999999999999999988899998 89999998
No 242
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.04 E-value=0.32 Score=40.44 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=31.4
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+|.|+|+|.+|...+.++...|. .|+.++.+++.++..+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence 58899999999998888888899 9999999988765543
No 243
>PRK07063 short chain dehydrogenase; Provisional
Probab=93.03 E-value=0.3 Score=42.38 Aligned_cols=41 Identities=24% Similarity=0.262 Sum_probs=34.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|.|+ |++|...+..+...|+ +|+.+++++++.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~ 47 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERA 47 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4789999998 9999999998889999 789999887765544
No 244
>PLN02780 ketoreductase/ oxidoreductase
Probab=93.02 E-value=0.25 Score=44.82 Aligned_cols=41 Identities=22% Similarity=0.161 Sum_probs=35.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.|++++|+|+ +++|...+..+...|+ +|+.+++++++++.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHH
Confidence 5899999998 9999998887777899 799999998887654
No 245
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=92.99 E-value=0.31 Score=42.20 Aligned_cols=43 Identities=28% Similarity=0.366 Sum_probs=35.8
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
-+++++||.|+ |++|...++.+...|+ +|++++++.++++...
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~ 53 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAA 53 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 35789999998 9999999988888999 8999998877665443
No 246
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=92.99 E-value=0.65 Score=39.42 Aligned_cols=40 Identities=30% Similarity=0.324 Sum_probs=33.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
+++++||+|+ |.+|...+..+...|. .|+++.+++++.+.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~ 44 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEA 44 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHH
Confidence 3578999998 9999999988888899 69999988776443
No 247
>PRK07035 short chain dehydrogenase; Provisional
Probab=92.95 E-value=0.32 Score=41.90 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=34.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|.|+ |++|...++.+...|. +|+.++++.++.+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~ 48 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAV 48 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4689999998 9999999998888999 899999887665443
No 248
>PRK05854 short chain dehydrogenase; Provisional
Probab=92.88 E-value=0.31 Score=43.99 Aligned_cols=41 Identities=27% Similarity=0.282 Sum_probs=34.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|+|+ +++|...+..+...|+ +|++++++.++.+.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~ 54 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAA 54 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4789999998 9999999888888999 889899887765443
No 249
>PRK06138 short chain dehydrogenase; Provisional
Probab=92.83 E-value=0.56 Score=40.21 Aligned_cols=41 Identities=29% Similarity=0.280 Sum_probs=33.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|.|+ |.+|...++.+...|+ +|+.+.++.++.+..
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~ 45 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERV 45 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHH
Confidence 4689999998 9999998888778898 799998887655443
No 250
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=92.80 E-value=0.6 Score=40.53 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=31.9
Q ss_pred EEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 204 ~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++|+|+ +++|...++.+...|+ +|+.+++++++++.+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~ 40 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKA 40 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 6899998 9999999888888999 899999887765443
No 251
>PRK08628 short chain dehydrogenase; Provisional
Probab=92.77 E-value=0.55 Score=40.58 Aligned_cols=43 Identities=19% Similarity=0.125 Sum_probs=34.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+++++||+|+ |++|...+..+...|+ +++++++++++.+..++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~ 49 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEE 49 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHH
Confidence 4689999998 9999998888888899 78888888776644443
No 252
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=92.68 E-value=0.34 Score=41.64 Aligned_cols=42 Identities=24% Similarity=0.253 Sum_probs=34.8
Q ss_pred CCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 199 ~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
..++++++|.|+ |++|...++.+...|+ +|++++++.++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~ 51 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEA 51 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHH
Confidence 457899999998 9999998888888899 88999988765433
No 253
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=92.68 E-value=0.59 Score=40.99 Aligned_cols=40 Identities=35% Similarity=0.377 Sum_probs=33.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+++++|.|+ |++|...+..+...|+ +|+++++++++.+.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~ 49 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEA 49 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 4789999998 9999999998888999 89999988765543
No 254
>PRK06194 hypothetical protein; Provisional
Probab=92.67 E-value=0.34 Score=42.65 Aligned_cols=41 Identities=27% Similarity=0.404 Sum_probs=33.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.++++||+|+ |++|...+..+...|+ +|++++++.++++..
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 46 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRA 46 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence 3678999998 9999999988888899 899999876654443
No 255
>PRK06172 short chain dehydrogenase; Provisional
Probab=92.66 E-value=0.36 Score=41.63 Aligned_cols=39 Identities=26% Similarity=0.227 Sum_probs=33.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
++++++|.|+ |++|...+..+...|+ +|+.+++++++.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~ 45 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGE 45 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 4789999998 9999998888888898 7999998876644
No 256
>PRK08589 short chain dehydrogenase; Validated
Probab=92.61 E-value=0.57 Score=41.09 Aligned_cols=35 Identities=31% Similarity=0.354 Sum_probs=30.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
+++++||.|+ +++|...+..+...|+ +|+++++++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~ 40 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAE 40 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcH
Confidence 5789999998 9999998888888899 889888883
No 257
>PRK08303 short chain dehydrogenase; Provisional
Probab=92.60 E-value=0.71 Score=41.57 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=30.1
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.+++++|.|+ +++|...++.+...|+ +|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 5789999998 8999999988888999 88888876
No 258
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=92.59 E-value=0.55 Score=43.89 Aligned_cols=58 Identities=19% Similarity=0.307 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 185 ~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+-...+..+.+..++++|++||-+|.| .|..+..+++..|+ +|++++.+++.++.+++
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~ 208 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQE 208 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 344455556678889999999999974 46677888888888 89999999999888876
No 259
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.55 E-value=0.69 Score=40.88 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=29.6
Q ss_pred CCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.+++++|+|+ +++|.+.++.+...|+ +|+.+++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~ 41 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNE 41 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCH
Confidence 4789999997 4899999888888999 788888774
No 260
>PRK09186 flagellin modification protein A; Provisional
Probab=92.55 E-value=0.37 Score=41.51 Aligned_cols=41 Identities=29% Similarity=0.398 Sum_probs=34.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|.|+ |++|...+..+...|+ +|+++.+++++.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~ 44 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNEL 44 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHH
Confidence 4789999998 9999999988888999 788888887765544
No 261
>PRK05884 short chain dehydrogenase; Provisional
Probab=92.54 E-value=0.84 Score=38.85 Aligned_cols=44 Identities=25% Similarity=0.401 Sum_probs=35.0
Q ss_pred EEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HcCCc
Q 023561 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT 248 (280)
Q Consensus 204 ~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~Ga~ 248 (280)
+++|.|+ |++|...++.+...|+ +|+.+++++++++.+. +.++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~ 47 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVD 47 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCc
Confidence 5889998 9999999988888899 8888998887776543 35543
No 262
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=92.52 E-value=0.42 Score=38.26 Aligned_cols=33 Identities=33% Similarity=0.322 Sum_probs=28.0
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
++++|+|+ +++|...++.+...|...|+.+.++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec
Confidence 47899998 9999998877777777688888888
No 263
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=92.51 E-value=0.71 Score=40.83 Aligned_cols=43 Identities=23% Similarity=0.153 Sum_probs=35.4
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
...+++++|+|+|++|.+.+..+...|+ .|++++++++|.+.+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~l 156 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEEL 156 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 3557899999999999998888888898 889999987765443
No 264
>PRK06483 dihydromonapterin reductase; Provisional
Probab=92.50 E-value=0.92 Score=38.65 Aligned_cols=45 Identities=22% Similarity=0.164 Sum_probs=34.7
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHHcCC
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGV 247 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~Ga 247 (280)
++++||.|+ +++|...++.+...|+ +|+++++++++ .+.+++.|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~ 48 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGA 48 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC
Confidence 578999998 9999999988888999 88888877643 334444564
No 265
>PRK08251 short chain dehydrogenase; Provisional
Probab=92.49 E-value=0.91 Score=38.89 Aligned_cols=40 Identities=15% Similarity=0.182 Sum_probs=33.0
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++|+|+ |++|...+..+...|. +|+++++++++.+.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~ 42 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEEL 42 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 578999998 9999988877777898 888888888766544
No 266
>PRK06114 short chain dehydrogenase; Provisional
Probab=92.45 E-value=0.74 Score=39.81 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=30.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
++++++|.|+ +++|...++.+...|+ +|+++++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~ 42 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRT 42 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 5789999998 9999999998888999 888888764
No 267
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=92.44 E-value=0.41 Score=41.32 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=34.3
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
-++++++|.|+ |++|...+..+...|+ +|+.+++++++++.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~ 50 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEA 50 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHH
Confidence 35889999998 9999998888888899 89999988765443
No 268
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.37 E-value=0.93 Score=38.61 Aligned_cols=69 Identities=26% Similarity=0.324 Sum_probs=49.7
Q ss_pred ChhhhcccchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHHcCCc
Q 023561 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVT 248 (280)
Q Consensus 175 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~~Ga~ 248 (280)
+....-.++.+...|. +.+...+++|++||=+|+|. |..++-+++..+ +|+.+++.++-.+ .++.+|.+
T Consensus 48 pi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~ 120 (209)
T COG2518 48 PIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYE 120 (209)
T ss_pred cCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCC
Confidence 3334444554555554 56888999999999999754 888999999887 7999999876333 34557774
No 269
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=92.35 E-value=0.95 Score=40.48 Aligned_cols=44 Identities=23% Similarity=0.411 Sum_probs=34.6
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
..++++||-+|.|. |.+++.+++ .|..+|+++|.++...+.+++
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~ 200 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARK 200 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHH
Confidence 45789999999877 777777665 577799999999887766654
No 270
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=92.35 E-value=0.7 Score=34.86 Aligned_cols=46 Identities=33% Similarity=0.455 Sum_probs=38.4
Q ss_pred EEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEc
Q 023561 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 205 VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~ 252 (280)
|+|.|.|.+|...++.++..+. .|++++.++++.+.+++.|.. ++.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~ 46 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIY 46 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEE
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-ccc
Confidence 5788999999999999999665 899999999999999988854 443
No 271
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=92.33 E-value=0.43 Score=41.18 Aligned_cols=40 Identities=35% Similarity=0.537 Sum_probs=33.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~ 48 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAEL 48 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHH
Confidence 5789999998 9999999988888999 89999988766543
No 272
>PRK12367 short chain dehydrogenase; Provisional
Probab=92.31 E-value=1.1 Score=38.95 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=30.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.+++++|+|+ |++|...++.+...|+ +|+++++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~ 48 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSK 48 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCc
Confidence 4689999998 9999999988888999 888888765
No 273
>PRK09242 tropinone reductase; Provisional
Probab=92.30 E-value=0.43 Score=41.27 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=34.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|.|+ |++|...+..+...|+ +|++++++.++.+.+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~ 49 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQA 49 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 4789999998 9999999999888999 899998887765544
No 274
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=92.29 E-value=0.4 Score=43.23 Aligned_cols=41 Identities=27% Similarity=0.234 Sum_probs=34.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|+|+ |++|...++.+...|+ +|++++++.++.+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~ 46 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAA 46 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence 4789999998 9999999988888898 899999888776544
No 275
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=92.18 E-value=0.7 Score=37.76 Aligned_cols=53 Identities=26% Similarity=0.369 Sum_probs=37.9
Q ss_pred HHHHcC-CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC
Q 023561 193 AWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (280)
Q Consensus 193 l~~~~~-~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 246 (280)
+.+..+ .-.|++++|.|=|.+|...++.++.+|+ +|++++.++-+.-.+..-|
T Consensus 13 i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dG 66 (162)
T PF00670_consen 13 IMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDG 66 (162)
T ss_dssp HHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT
T ss_pred HHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcC
Confidence 444433 5678999999999999999999999999 9999999997766665444
No 276
>PRK07774 short chain dehydrogenase; Provisional
Probab=92.17 E-value=0.47 Score=40.71 Aligned_cols=40 Identities=30% Similarity=0.359 Sum_probs=33.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++++++|+|+ |.+|...+..+...|. +|+++++++++.+.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~ 45 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAER 45 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 5689999998 9999999988888898 89999988765433
No 277
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.16 E-value=0.82 Score=40.28 Aligned_cols=36 Identities=25% Similarity=0.303 Sum_probs=29.5
Q ss_pred CCCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 200 EVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 200 ~~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
-.++++||.|+ +++|...+..+...|+ +|+.+.+++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~ 46 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGD 46 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCch
Confidence 35789999997 5899999888888999 788777653
No 278
>PRK08643 acetoin reductase; Validated
Probab=92.13 E-value=0.46 Score=41.04 Aligned_cols=40 Identities=23% Similarity=0.265 Sum_probs=33.5
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++|.|+ |++|...++.+...|+ +|+.++++.++.+.+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~ 42 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAA 42 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 578999998 9999999988888999 899998887665443
No 279
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=92.11 E-value=0.68 Score=40.05 Aligned_cols=39 Identities=26% Similarity=0.306 Sum_probs=32.6
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++++||.|+ |.+|...+..+...|+ +|+.++++.++.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~ 41 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAAN 41 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHH
Confidence 578999998 9999998888888899 88999888765543
No 280
>PRK07806 short chain dehydrogenase; Provisional
Probab=92.06 E-value=0.96 Score=38.76 Aligned_cols=35 Identities=23% Similarity=0.195 Sum_probs=29.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
++++++|+|+ |++|...+..+...|. +|+++.++.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 4689999998 9999999988888898 788877754
No 281
>PRK07791 short chain dehydrogenase; Provisional
Probab=92.03 E-value=1.8 Score=38.41 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=30.0
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
-++++++|.|+ +++|...+..+...|+ +|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 46789999998 9999998888888999 788776653
No 282
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.98 E-value=0.99 Score=40.42 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=34.5
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHHcC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE----KFEIGKRFG 246 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~----~~~~~~~~G 246 (280)
-.|+.|||+|+ +++|++.++=...+|+ .++..|.+.+ ..+..++.|
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g 86 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIG 86 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcC
Confidence 46899999998 8999987777777788 7888887754 344445555
No 283
>PRK06197 short chain dehydrogenase; Provisional
Probab=91.98 E-value=0.41 Score=42.78 Aligned_cols=40 Identities=20% Similarity=0.221 Sum_probs=33.6
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
..+++++|.|+ |++|...+..+...|+ +|++++++.++.+
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~ 54 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGK 54 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 36789999998 9999999888888899 7888888876644
No 284
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=91.95 E-value=0.96 Score=38.62 Aligned_cols=39 Identities=28% Similarity=0.377 Sum_probs=32.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
.+++++|+|+ |.+|...+..+...|. +|++++++.++..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~ 44 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAA 44 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 4689999998 9999998888888898 8999998865443
No 285
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=91.90 E-value=1.7 Score=37.02 Aligned_cols=42 Identities=26% Similarity=0.225 Sum_probs=34.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
++++++|.|+ |.+|...+..+...|. .|+..+++.++++.+.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~ 47 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALA 47 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHH
Confidence 4689999998 9999998888888898 7888888777665543
No 286
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=91.89 E-value=0.46 Score=40.79 Aligned_cols=41 Identities=29% Similarity=0.388 Sum_probs=34.1
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
++++||.|+ |.+|...+..+...|. +|++++++.++.+.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~ 42 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAA 42 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 358999998 9999999988888899 8999998877665543
No 287
>PRK08226 short chain dehydrogenase; Provisional
Probab=91.85 E-value=0.99 Score=39.09 Aligned_cols=41 Identities=29% Similarity=0.361 Sum_probs=33.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
++++++|+|+ |++|...+..+...|+ +|+.++++++..+..
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~ 46 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLA 46 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHH
Confidence 5689999998 9999999988888999 799998877544433
No 288
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.84 E-value=0.75 Score=44.08 Aligned_cols=50 Identities=34% Similarity=0.323 Sum_probs=38.6
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh-----HHHHHHHcCCcEE
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEF 250 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~-----~~~~~~~~Ga~~v 250 (280)
..+++|+|+|+|.+|+.++.+++..|. .|++++..+. ..+.+++.|+...
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~ 68 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVR 68 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEE
Confidence 457899999999999999999999999 7888885542 2345666776543
No 289
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=91.84 E-value=0.52 Score=40.51 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=34.0
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++||+|+ |.+|...+..+...|. +|+++++++++.+..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~ 44 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAA 44 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4679999998 9999999988888899 889999887765443
No 290
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=91.83 E-value=0.62 Score=43.48 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=37.9
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 246 (280)
.+|||+|+|.+|..+++.+...+-.+|++.+++.++.+.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~ 45 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI 45 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc
Confidence 47899999999999999988888459999999999888887654
No 291
>PRK07074 short chain dehydrogenase; Provisional
Probab=91.81 E-value=0.93 Score=39.12 Aligned_cols=41 Identities=24% Similarity=0.373 Sum_probs=33.8
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+++++|+|+ |.+|...+..+...|+ +|++++++.++.+.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~ 43 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFA 43 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 468999998 9999998888888898 7999998877765443
No 292
>PRK06720 hypothetical protein; Provisional
Probab=91.80 E-value=1.1 Score=36.72 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=32.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF 239 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~ 239 (280)
++++++|.|+ +++|...+..+...|+ +|++++++.++.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 5789999998 8999998888888898 899998876654
No 293
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.77 E-value=0.91 Score=39.37 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=33.8
Q ss_pred CCCEEEEECcc---HHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHc
Q 023561 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (280)
Q Consensus 201 ~g~~VlI~G~g---~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 245 (280)
.+++++|.|++ ++|.+.++.+...|+ +|+.++++++..+.++++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~ 52 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKL 52 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhh
Confidence 57899999974 899998888888999 788888775444444443
No 294
>PRK07856 short chain dehydrogenase; Provisional
Probab=91.73 E-value=1.3 Score=38.24 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=32.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.+++++|+|+ |++|...++.+...|+ +|+.++++.++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh
Confidence 5789999998 9999999988888999 88999887655
No 295
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=91.67 E-value=0.98 Score=38.88 Aligned_cols=43 Identities=19% Similarity=0.273 Sum_probs=35.3
Q ss_pred EEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCC
Q 023561 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV 247 (280)
Q Consensus 204 ~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga 247 (280)
+++|.|+ |++|...+..+...|+ +|+++++++++++.+.. ++.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~ 46 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGD 46 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcc
Confidence 6899998 9999999988888999 89999998887766544 443
No 296
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.66 E-value=1 Score=39.26 Aligned_cols=36 Identities=28% Similarity=0.394 Sum_probs=28.9
Q ss_pred CCCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 200 EVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 200 ~~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
-++++++|.|+ +++|.+.++.+...|+ +|+.+.+.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~ 42 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVD 42 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcH
Confidence 35789999994 5899998888888999 787776554
No 297
>PRK07102 short chain dehydrogenase; Provisional
Probab=91.63 E-value=1.4 Score=37.76 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=32.3
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++++|+|+ |++|...+..+...|+ +|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 57999998 9999998888888899 89999988876544
No 298
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=91.58 E-value=0.89 Score=39.35 Aligned_cols=35 Identities=23% Similarity=0.165 Sum_probs=30.5
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
..++++||+|+ |++|...++.+...|+ +|++++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~ 48 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG 48 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC
Confidence 35789999998 9999999988888999 78888776
No 299
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=91.55 E-value=1.7 Score=39.19 Aligned_cols=68 Identities=25% Similarity=0.281 Sum_probs=48.8
Q ss_pred CCCCEEEEECc-cHHHHHH-HHHHHHcCCCeEEEEcCChhHHHHHHH-----cCC---cEEEcCCCCCCccHHHHHHHhc
Q 023561 200 EVGSTVVIFGL-GSIGLAV-AEGARLCGATRIIGVDVISEKFEIGKR-----FGV---TEFVNSKNCGDKSVSQVLLSIY 269 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a-~~la~~~g~~~vi~~~~~~~~~~~~~~-----~Ga---~~vi~~~~~~~~~~~~~v~~~~ 269 (280)
+.|++.+|.|+ .++|..- -+||+ .|+ +|+.+.|+++|++..++ .++ ..++|..+ +....+.+++..
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~--~~~~ye~i~~~l 122 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK--GDEVYEKLLEKL 122 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC--CchhHHHHHHHh
Confidence 45789999998 8999874 45666 999 79999999999877653 554 23456655 222577777766
Q ss_pred CC
Q 023561 270 DL 271 (280)
Q Consensus 270 ~g 271 (280)
.+
T Consensus 123 ~~ 124 (312)
T KOG1014|consen 123 AG 124 (312)
T ss_pred cC
Confidence 55
No 300
>PRK06181 short chain dehydrogenase; Provisional
Probab=91.54 E-value=0.56 Score=40.68 Aligned_cols=38 Identities=26% Similarity=0.356 Sum_probs=32.2
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
++++||.|+ |++|...++.+...|. +|+++++++++.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~ 39 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLA 39 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 357999998 9999999988888998 8999998876544
No 301
>PRK08263 short chain dehydrogenase; Provisional
Probab=91.49 E-value=1.1 Score=39.36 Aligned_cols=42 Identities=19% Similarity=0.125 Sum_probs=34.9
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
++++||.|+ |++|...+..+...|. .|+.++++.++++.+.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~ 45 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAE 45 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH
Confidence 578999998 9999998888888898 79999988877665544
No 302
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=91.44 E-value=0.46 Score=37.72 Aligned_cols=41 Identities=27% Similarity=0.361 Sum_probs=33.9
Q ss_pred EEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 205 VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
|+|+|+|.+|.+.+..++..|. .|..+.+.+ +.+.+++.|.
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~ 41 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGL 41 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCE
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeE
Confidence 6899999999998888877888 899998877 7777776554
No 303
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.38 E-value=1.6 Score=39.11 Aligned_cols=35 Identities=31% Similarity=0.371 Sum_probs=29.4
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
-++++++|+|+ +++|...+..+...|+ +|+++++.
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~ 45 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVA 45 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCC
Confidence 35789999998 9999998888888899 78887764
No 304
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=91.37 E-value=1.2 Score=38.52 Aligned_cols=36 Identities=25% Similarity=0.510 Sum_probs=30.1
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
..+++++|.|+ |++|...++.+...|+ +|+.+++.+
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~ 44 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVE 44 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcc
Confidence 34789999998 9999999998888999 788776543
No 305
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.36 E-value=1 Score=38.97 Aligned_cols=46 Identities=26% Similarity=0.231 Sum_probs=33.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHHcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGKRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~~~~Ga 247 (280)
.+++++|+|+ |++|...++.+...|+ +|+++.+ ++++.+.+++.++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~ 53 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGV 53 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCC
Confidence 4689999998 9999999988888999 6666644 4444445544443
No 306
>PRK06398 aldose dehydrogenase; Validated
Probab=91.30 E-value=0.55 Score=40.88 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=31.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.|+++||+|+ +++|...+..+...|+ +|+.+++++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~ 42 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPS 42 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccc
Confidence 4789999998 9999999999988999 88888876543
No 307
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.29 E-value=0.88 Score=40.65 Aligned_cols=49 Identities=29% Similarity=0.364 Sum_probs=35.0
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHcCCcE
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE 249 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~Ga~~ 249 (280)
..+++|+|.|+ +++|...+.-.-..|+ .++.+.+..++++.+ ++.+..+
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~ 63 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLE 63 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcC
Confidence 45799999999 9999988877777888 555555566555544 4555533
No 308
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=91.28 E-value=0.17 Score=27.29 Aligned_cols=22 Identities=18% Similarity=0.271 Sum_probs=15.5
Q ss_pred eeeeeecCCCCCcEEEEeecCCC
Q 023561 17 CRAAIATAPGEPLVIDEVIVDPP 39 (280)
Q Consensus 17 ~~a~~~~~~g~~l~~~~~~~p~~ 39 (280)
|||+++.++++ .+++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 79999999988 99999988865
No 309
>PRK06482 short chain dehydrogenase; Provisional
Probab=91.27 E-value=1.1 Score=39.29 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=34.8
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+++||+|+ |.+|...++.+...|. +|+++.+++++++.+++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~ 44 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKA 44 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 67999998 9999998888888898 89999998887766654
No 310
>PLN02253 xanthoxin dehydrogenase
Probab=91.18 E-value=0.66 Score=40.71 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=32.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+++++|.|+ |++|...+..+...|+ +|+++++++++.+.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~ 57 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQN 57 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Confidence 4689999998 9999998888888899 88888887665443
No 311
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.14 E-value=0.72 Score=39.36 Aligned_cols=40 Identities=25% Similarity=0.242 Sum_probs=33.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+++++|.|+ |++|...+..+...|+ .|+.+++++++.+.
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~ 46 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKA 46 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 4688999998 9999999988888999 89999988766543
No 312
>PRK06940 short chain dehydrogenase; Provisional
Probab=91.14 E-value=1.5 Score=38.53 Aligned_cols=39 Identities=31% Similarity=0.509 Sum_probs=30.7
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++|.|+|++|...+..+. .|. +|+.+++++++++.+
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~ 40 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAA 40 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHH
Confidence 467899999999998887774 788 899999887665433
No 313
>PRK06128 oxidoreductase; Provisional
Probab=91.00 E-value=1.8 Score=38.56 Aligned_cols=34 Identities=29% Similarity=0.193 Sum_probs=28.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.++++||.|+ |++|...+..+...|+ +|+++.++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~ 88 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLP 88 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCC
Confidence 5789999998 9999999888888899 77776543
No 314
>PRK07577 short chain dehydrogenase; Provisional
Probab=91.00 E-value=0.99 Score=38.23 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=31.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
++++++|.|+ |++|...+..+...|. +|++++++.++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~ 39 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID 39 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc
Confidence 3678999998 9999999988888998 88888887654
No 315
>PLN00203 glutamyl-tRNA reductase
Probab=90.92 E-value=1.1 Score=43.55 Aligned_cols=44 Identities=18% Similarity=0.328 Sum_probs=38.0
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
.+.+|+|+|+|.+|.+++..+...|++.|+++.++.++.+.+.+
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~ 308 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALRE 308 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Confidence 37899999999999999999999998789999999888665543
No 316
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.89 E-value=2.3 Score=36.36 Aligned_cols=41 Identities=24% Similarity=0.200 Sum_probs=30.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~ 242 (280)
.+++++|+|+ |++|...+..+...|+ +|+.+. +++++.+.+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~ 46 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEAL 46 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence 3578999998 9999999988888899 666654 344444433
No 317
>PRK00811 spermidine synthase; Provisional
Probab=90.75 E-value=0.86 Score=40.70 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=35.3
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
...++||++|+|. |..+..+++..+.++|++++.+++-.+.+++
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~ 118 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRK 118 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHH
Confidence 4568999998754 6667777777677799999999988888876
No 318
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=90.72 E-value=0.87 Score=38.19 Aligned_cols=49 Identities=18% Similarity=0.364 Sum_probs=39.9
Q ss_pred HHHcCCCCCCEEEEECccHHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH
Q 023561 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK 243 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~ 243 (280)
.....+.++++|+-+|+|. |.+++.+++..+. .+|++++.+++..+.++
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~ 82 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTR 82 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 3456888999999999877 8888888887642 48999999998877664
No 319
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.71 E-value=1.8 Score=41.05 Aligned_cols=47 Identities=32% Similarity=0.478 Sum_probs=35.0
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh--hHH-HHHHHcCCc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKF-EIGKRFGVT 248 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~--~~~-~~~~~~Ga~ 248 (280)
++++++|+|+ |++|...++.+...|+ +|+++++.+ +++ +..++++..
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~ 259 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGT 259 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCe
Confidence 5789999998 9999999999889999 788887643 232 233346653
No 320
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.70 E-value=1.5 Score=37.60 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=29.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEE-EcCChhHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKF 239 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~ 239 (280)
++++++|.|+ |.+|...+..+...|+ +|++ ..++.++.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~ 42 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAA 42 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHH
Confidence 4679999998 9999999988888999 5554 46665554
No 321
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=90.67 E-value=0.49 Score=42.59 Aligned_cols=74 Identities=22% Similarity=0.278 Sum_probs=43.2
Q ss_pred ecccEEEcCCCCChhhhcccchhhHHHHHHHHHHc-CCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 163 DIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 163 ~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
+...++.+.+++.+-.. ...|...++.... ...+|++||=+|.|. |.+++..++ +|+++|+++|.++.-.+.
T Consensus 127 ~~~~~I~idPg~AFGTG-----~H~TT~lcl~~l~~~~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~ 199 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTG-----HHPTTRLCLELLEKYVKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEA 199 (295)
T ss_dssp TTSEEEEESTTSSS-SS-----HCHHHHHHHHHHHHHSSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHH
T ss_pred CCcEEEEECCCCcccCC-----CCHHHHHHHHHHHHhccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHH
Confidence 34556677766665554 2222222222221 257889998888643 555555555 588899999998865555
Q ss_pred HH
Q 023561 242 GK 243 (280)
Q Consensus 242 ~~ 243 (280)
++
T Consensus 200 a~ 201 (295)
T PF06325_consen 200 AR 201 (295)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 322
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.65 E-value=1.4 Score=38.58 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=28.8
Q ss_pred CCCEEEEECc-c--HHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g--~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.+++++|.|+ + ++|.+.+..+...|+ +|+.+++++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~ 42 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQND 42 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecch
Confidence 5789999998 3 799998888888999 788887763
No 323
>PRK06179 short chain dehydrogenase; Provisional
Probab=90.63 E-value=0.6 Score=40.70 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=32.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
.+++++|+|+ |++|...++.+...|+ +|++++++.++.+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~ 42 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAA 42 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcc
Confidence 3578999998 9999998888888899 7999998766553
No 324
>PLN02366 spermidine synthase
Probab=90.62 E-value=0.89 Score=41.20 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=35.3
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
....++||++|+|. |.++..+++..+.++|.+++.+++-.+.+++
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~ 133 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKK 133 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence 35578999998755 5567778887777789999999887777776
No 325
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=90.61 E-value=0.81 Score=34.05 Aligned_cols=42 Identities=40% Similarity=0.622 Sum_probs=34.2
Q ss_pred CCCEEEEECccHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~ 244 (280)
|+++||-+|.|. |..++.+++. .++ +|++++.+++-++.+++
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~ 43 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARE 43 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHH
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHH
Confidence 578999998755 7778888884 566 89999999988888775
No 326
>PRK11761 cysM cysteine synthase B; Provisional
Probab=90.60 E-value=4.3 Score=36.42 Aligned_cols=61 Identities=18% Similarity=0.202 Sum_probs=46.8
Q ss_pred HHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEcCC
Q 023561 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~~~ 254 (280)
.+...+.+|++|+....|..|.+.+..++..|.+-++.+.. +++|.+.++.+|++-++...
T Consensus 55 ~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 55 EKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34445667788776666999999999999999966666653 45899999999998776553
No 327
>PRK12743 oxidoreductase; Provisional
Probab=90.56 E-value=1.6 Score=37.81 Aligned_cols=36 Identities=19% Similarity=-0.034 Sum_probs=28.8
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc-CChhH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEK 238 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~-~~~~~ 238 (280)
+++++|.|+ +++|...++.+...|+ +|+.+. ++.++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~ 39 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEG 39 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHH
Confidence 578999998 9999999999988999 676664 34443
No 328
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=90.53 E-value=1.7 Score=37.59 Aligned_cols=40 Identities=20% Similarity=0.119 Sum_probs=32.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+++|||+|+ |.+|...+..+...|. +|+++.++.++.+.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~ 56 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKT 56 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHH
Confidence 4579999998 9999999888888898 78888887776543
No 329
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=90.53 E-value=0.79 Score=40.70 Aligned_cols=43 Identities=23% Similarity=0.259 Sum_probs=37.0
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
-.|++++|+|+ .++|.+.+..+...|+ +|+++++++++.+..+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~ 49 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETA 49 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 46789999998 8999999999999999 8999999988765554
No 330
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=90.52 E-value=1.8 Score=40.78 Aligned_cols=53 Identities=25% Similarity=0.337 Sum_probs=43.4
Q ss_pred HHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHHcCC
Q 023561 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGV 247 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~Ga 247 (280)
....--.+.++||+|+|-+|.+++..+...|.+.|++.-|+.+|.+ +++++|+
T Consensus 171 ~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~ 224 (414)
T COG0373 171 RIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA 224 (414)
T ss_pred HHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC
Confidence 3334357899999999999999999999999889999999888765 4556884
No 331
>PRK07832 short chain dehydrogenase; Provisional
Probab=90.48 E-value=0.78 Score=40.15 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=31.5
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~ 39 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQ 39 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 36899998 9999999988888999 78888888766443
No 332
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=90.40 E-value=0.89 Score=39.28 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=33.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+++++|.|+ +++|...+..+...|+ +++.++++.++.+.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~ 50 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANH 50 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 4789999998 9999999988888999 78888877766543
No 333
>PRK06701 short chain dehydrogenase; Provisional
Probab=90.35 E-value=2.5 Score=37.54 Aligned_cols=38 Identities=32% Similarity=0.143 Sum_probs=31.0
Q ss_pred CCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 198 ~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
...+++++||.|+ |++|...+..+...|+ +|+.+++++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~ 80 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDE 80 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 3445789999998 9999998888888899 788887764
No 334
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=90.25 E-value=1.8 Score=35.75 Aligned_cols=45 Identities=24% Similarity=0.227 Sum_probs=34.4
Q ss_pred EEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh-------hHHHHHHHcCCc
Q 023561 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-------EKFEIGKRFGVT 248 (280)
Q Consensus 204 ~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~-------~~~~~~~~~Ga~ 248 (280)
++||+|+ |++|...++.+...+..+++.+.++. +.++.+++.|+.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~ 54 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGAR 54 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-E
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCc
Confidence 6899987 99999999998888888999999882 244555667774
No 335
>PRK08219 short chain dehydrogenase; Provisional
Probab=90.23 E-value=2 Score=35.98 Aligned_cols=40 Identities=20% Similarity=0.166 Sum_probs=31.3
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
.+++||+|+ |.+|...+..+... . +|++++++.++.+.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~ 43 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELA 43 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHH
Confidence 368999998 99998877766666 6 7999998877765554
No 336
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=90.22 E-value=1.9 Score=37.14 Aligned_cols=83 Identities=17% Similarity=0.140 Sum_probs=55.8
Q ss_pred HHHcCCCCCCEEEEECccHHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----cCCcEEEcCCCCCCccHHHHHHHh
Q 023561 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQVLLSI 268 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~Ga~~vi~~~~~~~~~~~~~v~~~ 268 (280)
......+..++||=+|. .+|..++++|..+. -.+++.++.++++.+.+++ .|.+..+..-. ..+..+.+.+.
T Consensus 52 ~~L~~~~~~k~iLEiGT-~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~~ 128 (219)
T COG4122 52 RLLARLSGPKRILEIGT-AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSRL 128 (219)
T ss_pred HHHHHhcCCceEEEeec-ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHhc
Confidence 34455567788887774 45788899999887 3379999999999888864 77754322111 02455666553
Q ss_pred cCCCceEEEec
Q 023561 269 YDLPLLTISVS 279 (280)
Q Consensus 269 ~~gg~~~v~~~ 279 (280)
..+.+|.|++|
T Consensus 129 ~~~~fDliFID 139 (219)
T COG4122 129 LDGSFDLVFID 139 (219)
T ss_pred cCCCccEEEEe
Confidence 44578888876
No 337
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.12 E-value=1.4 Score=41.80 Aligned_cols=47 Identities=21% Similarity=0.163 Sum_probs=36.1
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHHcCCc
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE----KFEIGKRFGVT 248 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~----~~~~~~~~Ga~ 248 (280)
.+++++|+|.|.+|.+++.+++..|+ +|++.+.+.. ..+.+++.|..
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~ 54 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIK 54 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCE
Confidence 46889999998899999999999999 8999886542 22344555654
No 338
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=90.11 E-value=0.8 Score=44.93 Aligned_cols=47 Identities=13% Similarity=0.318 Sum_probs=41.8
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
++++|.|.|.+|...++.++..|. +++++|.++++.+.+++.|...+
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i 464 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAV 464 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEE
Confidence 688999999999999999999998 89999999999999988776444
No 339
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=90.08 E-value=1.4 Score=33.23 Aligned_cols=50 Identities=22% Similarity=0.310 Sum_probs=39.0
Q ss_pred HHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 193 l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+.....+.++++|+-+|.|. |..+..+++..+...|+++|.++...+.++
T Consensus 11 ~~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 60 (124)
T TIGR02469 11 TLSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIE 60 (124)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHH
Confidence 34556677888999999866 888888888875458999999988777654
No 340
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=90.07 E-value=0.96 Score=39.37 Aligned_cols=41 Identities=32% Similarity=0.409 Sum_probs=33.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|+|+ +++|...+..+...|+ +|+.+++++++++.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~ 50 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKG 50 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 5789999998 9999988887788899 788888887665443
No 341
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=90.02 E-value=1.6 Score=39.27 Aligned_cols=81 Identities=23% Similarity=0.348 Sum_probs=47.8
Q ss_pred eeeeEEeecccEEEcCCCCChhhhcccchhhHHHHHHHHHH-cCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC
Q 023561 156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234 (280)
Q Consensus 156 ~~~~~~~~~~~~~~iP~~ls~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~ 234 (280)
|.+|..-....++++.+++.+-.. ....|.+ ++... ..+++|++||=+|.|. |.+++..+ .+|+++|+++|.
T Consensus 121 w~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~l-cL~~Le~~~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~Di 193 (300)
T COG2264 121 WREYPEPSDELNIELDPGLAFGTG----THPTTSL-CLEALEKLLKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVDI 193 (300)
T ss_pred CccCCCCCCceEEEEccccccCCC----CChhHHH-HHHHHHHhhcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEecC
Confidence 544432224566777777755432 2223333 23322 2356889998888743 66666544 468879999999
Q ss_pred ChhHHHHHH
Q 023561 235 ISEKFEIGK 243 (280)
Q Consensus 235 ~~~~~~~~~ 243 (280)
++...+.++
T Consensus 194 Dp~AV~aa~ 202 (300)
T COG2264 194 DPQAVEAAR 202 (300)
T ss_pred CHHHHHHHH
Confidence 886544444
No 342
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=90.01 E-value=2.1 Score=36.75 Aligned_cols=47 Identities=26% Similarity=0.303 Sum_probs=38.7
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh----------hHHHHHHHcC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS----------EKFEIGKRFG 246 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~----------~~~~~~~~~G 246 (280)
-.|.+|+|.|-|.+|..+++++...|.+.|.++|.+. +.++..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 4689999999999999999999999996777778776 6666666544
No 343
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.97 E-value=0.33 Score=46.04 Aligned_cols=59 Identities=12% Similarity=0.079 Sum_probs=43.9
Q ss_pred HcCCCCCCEEE----EECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCc-EEEcCCC
Q 023561 196 TANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKN 255 (280)
Q Consensus 196 ~~~~~~g~~Vl----I~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~-~vi~~~~ 255 (280)
..++++|+++| |+|+ |++|.+++++++..|+ .|+++...+.+....+..+.+ .+++.+.
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~ 92 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG 92 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC
Confidence 44667888887 7776 9999999999999999 888887666655444445555 4666654
No 344
>PLN03013 cysteine synthase
Probab=89.93 E-value=4.1 Score=38.64 Aligned_cols=60 Identities=20% Similarity=0.205 Sum_probs=45.3
Q ss_pred HHHcCCCCCCEEEEEC-ccHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEcC
Q 023561 194 WRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G-~g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~~ 253 (280)
.+...+.+|.+.+|.. .|..|++.+..++.+|++-++++.. +++|+++++.+||+-++..
T Consensus 166 ~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~ 228 (429)
T PLN03013 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228 (429)
T ss_pred HHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 3455667886655665 4999999999999999965555543 4679999999999866543
No 345
>PRK12937 short chain dehydrogenase; Provisional
Probab=89.91 E-value=3.3 Score=35.19 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=28.7
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.++++++|+|+ |++|...+..+...|. +++.+.++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~ 38 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAG 38 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCC
Confidence 35789999998 9999999999998999 66666543
No 346
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.89 E-value=1.4 Score=38.48 Aligned_cols=33 Identities=30% Similarity=0.426 Sum_probs=26.7
Q ss_pred CCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcC
Q 023561 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDV 234 (280)
Q Consensus 201 ~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~ 234 (280)
++++++|.|+ +++|.+.+..+...|+ +|+.+.+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~ 40 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYV 40 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEcc
Confidence 5789999994 5899998888888999 7777654
No 347
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=89.86 E-value=1.3 Score=36.29 Aligned_cols=46 Identities=30% Similarity=0.312 Sum_probs=34.8
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~Ga 247 (280)
++++|.|+|-|.-|++.++-+|..|. +|++..+..+ ..+.+++-|.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf 49 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGF 49 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCC
Confidence 57899999999999999999999999 6665555544 7888888775
No 348
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=89.77 E-value=0.9 Score=44.35 Aligned_cols=42 Identities=31% Similarity=0.399 Sum_probs=36.0
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
.+++++|+|+|++|.+++..+...|+ +|+++.++.+|.+.+.
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la 419 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELA 419 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHH
Confidence 46899999999999999999999999 8999999877765553
No 349
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=89.73 E-value=1.7 Score=39.64 Aligned_cols=59 Identities=20% Similarity=0.187 Sum_probs=47.9
Q ss_pred HHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHHcCCcEEEcC
Q 023561 194 WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~---~~~~~~~~~~~Ga~~vi~~ 253 (280)
.....+.+|+++||-.. |-+|...+.++...|. ++|++-. +.+|...++.+|+..+..+
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~tp 157 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILTP 157 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEecC
Confidence 44567899999999987 8999999999999999 5565543 4589999999999877654
No 350
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=89.67 E-value=2.2 Score=39.98 Aligned_cols=33 Identities=30% Similarity=0.408 Sum_probs=24.9
Q ss_pred CCCCEEEEECc-cHHHHH--HHHHHHHcCCCeEEEEcC
Q 023561 200 EVGSTVVIFGL-GSIGLA--VAEGARLCGATRIIGVDV 234 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~--a~~la~~~g~~~vi~~~~ 234 (280)
..++++||+|+ +++|++ .++.+ ..|+ +++++..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~ 74 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFF 74 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEec
Confidence 44589999998 899999 45555 7899 6677763
No 351
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.63 E-value=1.6 Score=37.99 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=28.2
Q ss_pred CCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 201 ~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.+++++|.|+ +++|...+..+...|+ +|+.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAG 42 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCc
Confidence 5789999997 4999998888888999 78887654
No 352
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=89.60 E-value=0.92 Score=31.98 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=28.0
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
+|+|+|+|.+|+-.+..++.+|. .|..+.+.+
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~-~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGK-EVTLIERSD 32 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTS-EEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHhCc-EEEEEeccc
Confidence 57899999999999999999998 788887764
No 353
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=89.57 E-value=0.69 Score=41.14 Aligned_cols=49 Identities=20% Similarity=0.308 Sum_probs=34.6
Q ss_pred HHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 193 l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+.+.+++++|++||-+|.| -|.++..+++..|+ +|+++..+++..+.++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~ 102 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYAR 102 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHH
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHH
Confidence 6678899999999999975 35677788888899 8999999988877764
No 354
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=89.57 E-value=3.2 Score=35.40 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=26.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEE
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~ 232 (280)
++++++|+|+ |++|...++.+...|+ +++++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~ 33 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAG 33 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEE
Confidence 3688999998 9999999999999999 66664
No 355
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=89.48 E-value=2.3 Score=38.03 Aligned_cols=54 Identities=19% Similarity=0.293 Sum_probs=44.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 189 a~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
++..+.+.+++++|++||=+|.|- |.+++.+|+..|+ +|++++-+++..+.+++
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~ 113 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEK 113 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHH
Confidence 334467889999999999999754 6678888998899 99999999987777654
No 356
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.40 E-value=1.2 Score=37.88 Aligned_cols=40 Identities=30% Similarity=0.385 Sum_probs=31.8
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG 242 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~ 242 (280)
++++||+|+ |.+|...+..+...|+ +++++ ++++++.+.+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~ 46 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQEL 46 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence 578999998 9999998887778899 67777 8877665433
No 357
>CHL00194 ycf39 Ycf39; Provisional
Probab=89.32 E-value=1.1 Score=40.27 Aligned_cols=43 Identities=19% Similarity=0.266 Sum_probs=34.2
Q ss_pred EEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 204 ~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
+|+|+|+ |.+|...+..+...|. .|+++.++.++...+...|+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v 45 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGA 45 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCC
Confidence 6999998 9999999988888898 78888887666554444444
No 358
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=89.24 E-value=2.5 Score=36.37 Aligned_cols=44 Identities=23% Similarity=0.314 Sum_probs=37.1
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH--cCCc
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVT 248 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~--~Ga~ 248 (280)
.++|+|+|.+|...++.+...|. .|++++.++++.+...+ ....
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~ 47 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH 47 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE
Confidence 58899999999999999999999 89999999998777333 5543
No 359
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=89.22 E-value=5.5 Score=35.61 Aligned_cols=59 Identities=17% Similarity=0.176 Sum_probs=44.8
Q ss_pred HHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEc
Q 023561 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~ 252 (280)
.+...+.++++|+....|..|.+.+..++.+|.+-++.+.. ++.|+++++.+|++-++.
T Consensus 51 ~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v 111 (290)
T TIGR01138 51 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILV 111 (290)
T ss_pred HHcCCCCCCCEEEEECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEe
Confidence 34445567777766556999999999999999966666654 357999999999976653
No 360
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.19 E-value=1.1 Score=40.80 Aligned_cols=43 Identities=26% Similarity=0.280 Sum_probs=36.3
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
-.|.+++|+|+ +++|..++.-+...|+ +|++..++.++.+.++
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~ 76 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAK 76 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHH
Confidence 45689999998 9999999999999998 9999999986655554
No 361
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=89.11 E-value=1.1 Score=39.94 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=33.3
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++|.|+|+|.+|...+..+...|. .|+++++++++++.
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~ 41 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKN 41 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHH
Confidence 579999999999998888888899 89999999887654
No 362
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=88.99 E-value=2.7 Score=35.57 Aligned_cols=35 Identities=29% Similarity=0.310 Sum_probs=28.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.+++++|.|+ |.+|...+..+...|+ +|+++.++.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~ 39 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASS 39 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 4578999998 9999999999888999 665655544
No 363
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=88.88 E-value=1.2 Score=40.07 Aligned_cols=45 Identities=29% Similarity=0.512 Sum_probs=38.3
Q ss_pred CEEEEECccHHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHcCC
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~Ga 247 (280)
.+|.|+|.|.+|...+..++..|. ..|+++++++++.+.+++.|.
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~ 52 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGL 52 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCC
Confidence 579999999999998888888874 379999999988888877775
No 364
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.85 E-value=3.2 Score=37.10 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=41.4
Q ss_pred CCCCCEEEEECccH-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCC
Q 023561 199 VEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (280)
Q Consensus 199 ~~~g~~VlI~G~g~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~ 255 (280)
.-.|++|+|+|.|. +|...+.++...|+ +|+++.+....+...- ..+|-+|+...
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~L~~~~-~~aDIvI~AtG 211 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQNLPELV-KQADIIVGAVG 211 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-ccCCEEEEccC
Confidence 36789999999976 99999999999999 8888876443332211 46788887653
No 365
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.76 E-value=2.5 Score=36.25 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=28.0
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
++++|.|+ |++|...+..+...|+ +|+.+++..
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCc
Confidence 67999998 9999999888888899 788887653
No 366
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=88.72 E-value=2.4 Score=41.29 Aligned_cols=79 Identities=18% Similarity=0.079 Sum_probs=49.1
Q ss_pred CCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----cCCcEEEcCCCCCCccHHHHHHHhcCC
Q 023561 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEFVNSKNCGDKSVSQVLLSIYDL 271 (280)
Q Consensus 198 ~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~Ga~~vi~~~~~~~~~~~~~v~~~~~g 271 (280)
+.-.|++|||.|+ |.+|.-.+.-....+.++++..++++.++-.++. ++...+.-+- .+-...+.+.+...+
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~i--gdVrD~~~~~~~~~~ 323 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYI--GDVRDRDRVERAMEG 323 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEe--cccccHHHHHHHHhc
Confidence 3456899999998 9999876644444588899999999987665542 3422211100 012224455555556
Q ss_pred -CceEEEe
Q 023561 272 -PLLTISV 278 (280)
Q Consensus 272 -g~~~v~~ 278 (280)
..|.|..
T Consensus 324 ~kvd~VfH 331 (588)
T COG1086 324 HKVDIVFH 331 (588)
T ss_pred CCCceEEE
Confidence 6766654
No 367
>PRK07775 short chain dehydrogenase; Provisional
Probab=88.72 E-value=1.4 Score=38.66 Aligned_cols=39 Identities=23% Similarity=0.130 Sum_probs=31.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
+.++++|+|+ |.+|...+..+...|+ +|+++.++.++.+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~ 48 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCE 48 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 3468999998 9999999988888899 7888887766544
No 368
>PRK06523 short chain dehydrogenase; Provisional
Probab=88.71 E-value=0.86 Score=39.41 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=31.4
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
-+++++||.|+ |++|...++.+...|+ +|++++++++
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~ 44 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRP 44 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChh
Confidence 35789999998 9999999988888899 7888887654
No 369
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=88.70 E-value=0.71 Score=41.70 Aligned_cols=44 Identities=27% Similarity=0.340 Sum_probs=38.7
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCC
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV 247 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga 247 (280)
.+|.|+|+|.+|.-++.+|.-+|+ +|...+.+.+|++.+.. ++.
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~ 213 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGG 213 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCc
Confidence 567778999999999999999999 89999999999998876 443
No 370
>PLN02565 cysteine synthase
Probab=88.68 E-value=5.3 Score=36.36 Aligned_cols=59 Identities=24% Similarity=0.196 Sum_probs=44.0
Q ss_pred HHHcCCCCCCEEEEEC-ccHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEc
Q 023561 194 WRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 194 ~~~~~~~~g~~VlI~G-~g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~ 252 (280)
.+...+.+|.+.+|.. .|..|.+.+..++.+|.+-+|++.. +++|++.++.+|++-++.
T Consensus 58 ~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~ 119 (322)
T PLN02565 58 EEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLT 119 (322)
T ss_pred HHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEe
Confidence 3444557786655655 4999999999999999965555543 458999999999976553
No 371
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=88.61 E-value=1.2 Score=39.74 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=33.9
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
++|.|+|+|.+|...++.+...|. .|++.++++++.+.+.
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGF-QTTLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHH
Confidence 468999999999998888888898 8999999988766643
No 372
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=88.59 E-value=1.3 Score=44.31 Aligned_cols=53 Identities=23% Similarity=0.230 Sum_probs=40.8
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHHcCCcEEEcC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNS 253 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~Ga~~vi~~ 253 (280)
..+++|+|+|+|+.|+.++..++..|. +|++++..+. ..+.++++|++..++.
T Consensus 191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~ 264 (652)
T PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNT 264 (652)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 357899999999999999999999999 7888876532 2455567887655544
No 373
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=88.57 E-value=0.98 Score=37.72 Aligned_cols=58 Identities=28% Similarity=0.435 Sum_probs=40.4
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhc
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIY 269 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~ 269 (280)
+|.|+|.|-+|+-.+..+...|. +|+++|.++++.+.+.+ |...+ .+ +...+.+++..
T Consensus 2 ~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~-g~~p~---~E---~~l~~ll~~~~ 59 (185)
T PF03721_consen 2 KIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN-GELPI---YE---PGLDELLKENV 59 (185)
T ss_dssp EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT-TSSSS----C---TTHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh-ccccc---cc---cchhhhhcccc
Confidence 68899999999999999999999 99999999999988875 32222 22 55556666544
No 374
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=88.45 E-value=1.2 Score=41.92 Aligned_cols=39 Identities=28% Similarity=0.492 Sum_probs=33.1
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
.+++++|.|+ |++|...+..+...|+ +|+++++++++++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~ 216 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKIT 216 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 4789999998 9999999988888899 8888888776654
No 375
>PRK11823 DNA repair protein RadA; Provisional
Probab=88.40 E-value=3.7 Score=39.23 Aligned_cols=79 Identities=18% Similarity=0.210 Sum_probs=40.4
Q ss_pred cCCCCCCEEEEECccHHH--HHHHHHHHH---cCCCeEEEEcCChhHHH---HHHHcCC--cEEEcCCCCCCccHHHHHH
Q 023561 197 ANVEVGSTVVIFGLGSIG--LAVAEGARL---CGATRIIGVDVISEKFE---IGKRFGV--TEFVNSKNCGDKSVSQVLL 266 (280)
Q Consensus 197 ~~~~~g~~VlI~G~g~~G--~~a~~la~~---~g~~~vi~~~~~~~~~~---~~~~~Ga--~~vi~~~~~~~~~~~~~v~ 266 (280)
..+.+|..++|.|..++| .++.|++.. .|. +++-++..+...+ .++.+|. +.+....+ .++.+.+.
T Consensus 75 GGi~~Gs~~lI~G~pG~GKTtL~lq~a~~~a~~g~-~vlYvs~Ees~~qi~~ra~rlg~~~~~l~~~~e---~~l~~i~~ 150 (446)
T PRK11823 75 GGLVPGSVVLIGGDPGIGKSTLLLQVAARLAAAGG-KVLYVSGEESASQIKLRAERLGLPSDNLYLLAE---TNLEAILA 150 (446)
T ss_pred CCccCCEEEEEECCCCCCHHHHHHHHHHHHHhcCC-eEEEEEccccHHHHHHHHHHcCCChhcEEEeCC---CCHHHHHH
Confidence 368889999999874444 445555553 255 5555554433222 2445775 22322222 33333333
Q ss_pred HhcCCCceEEEec
Q 023561 267 SIYDLPLLTISVS 279 (280)
Q Consensus 267 ~~~~gg~~~v~~~ 279 (280)
.+...+.+.+++|
T Consensus 151 ~i~~~~~~lVVID 163 (446)
T PRK11823 151 TIEEEKPDLVVID 163 (446)
T ss_pred HHHhhCCCEEEEe
Confidence 3322356666666
No 376
>PLN02823 spermine synthase
Probab=88.38 E-value=2.1 Score=39.35 Aligned_cols=43 Identities=23% Similarity=0.298 Sum_probs=34.6
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
..++|||+|+|. |..+..+++..+.++|++++.+++-.+++++
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~ 145 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRK 145 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence 457899998753 5566677787777799999999999998887
No 377
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=88.38 E-value=3.2 Score=38.81 Aligned_cols=40 Identities=23% Similarity=0.231 Sum_probs=33.3
Q ss_pred CCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 198 ~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.-..+.+|||+|+ |.+|...+..+...|. .|+++.++.++
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~ 96 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSG 96 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhh
Confidence 3456789999998 9999999988888898 88888887654
No 378
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=88.38 E-value=1.6 Score=35.29 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=35.7
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+|.|+|+|..|.+.+..+...|. +|....++++..+.+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~ 40 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINE 40 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHH
Confidence 58899999999999999999997 99999999888777765
No 379
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=88.33 E-value=0.97 Score=42.02 Aligned_cols=44 Identities=25% Similarity=0.359 Sum_probs=36.3
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC-h-------------hHHHHHHHcCC
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVI-S-------------EKFEIGKRFGV 247 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~-~-------------~~~~~~~~~Ga 247 (280)
-.|+|.|+|+.|++++.+++..|. +|.++++. + ..++.++++|+
T Consensus 3 ~dV~IvGaG~aGl~lA~~L~~~G~-~V~l~E~~~~~~~~~~r~~~l~~~~~~~L~~lG~ 60 (387)
T COG0654 3 LDVAIVGAGPAGLALALALARAGL-DVTLLERAPRELLERGRGIALSPNALRALERLGL 60 (387)
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-cEEEEccCccccccCceeeeecHhHHHHHHHcCC
Confidence 458999999999999999999998 89999886 1 23666777776
No 380
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=88.29 E-value=1.4 Score=39.21 Aligned_cols=43 Identities=19% Similarity=0.272 Sum_probs=35.4
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
+|+|+|+|.+|...+..+...|. .|+.+++++++.+.+++.|.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~ 44 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGL 44 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCC
Confidence 58999999999988887777887 79999987787777776554
No 381
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=88.24 E-value=1 Score=39.40 Aligned_cols=39 Identities=26% Similarity=0.359 Sum_probs=33.9
Q ss_pred CCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
.+.+-.+++|+|+|.++...+++|+.+|+ +|+++|..++
T Consensus 96 ~~~p~~~L~IfGaG~va~~la~la~~lGf-~V~v~D~R~~ 134 (246)
T TIGR02964 96 EAPPAPHVVLFGAGHVGRALVRALAPLPC-RVTWVDSREA 134 (246)
T ss_pred ccCCCCEEEEECCcHHHHHHHHHHhcCCC-EEEEEeCCcc
Confidence 35677899999999999999999999999 8888886544
No 382
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=88.23 E-value=0.95 Score=39.07 Aligned_cols=46 Identities=24% Similarity=0.328 Sum_probs=39.1
Q ss_pred CCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
+..+=+.|.|+|+|.+|.-.+|++...|. +|..++.+++.+..+++
T Consensus 7 ~~~~~~~V~ivGaG~MGSGIAQv~a~sg~-~V~l~d~~~~aL~~A~~ 52 (298)
T KOG2304|consen 7 NMAEIKNVAIVGAGQMGSGIAQVAATSGL-NVWLVDANEDALSRATK 52 (298)
T ss_pred ccccccceEEEcccccchhHHHHHHhcCC-ceEEecCCHHHHHHHHH
Confidence 34455789999999999999999999999 89999999887776643
No 383
>PRK08278 short chain dehydrogenase; Provisional
Probab=88.23 E-value=2.6 Score=36.93 Aligned_cols=36 Identities=39% Similarity=0.426 Sum_probs=30.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
.+++++|+|+ |++|...+..+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4689999998 9999999988888899 8888887653
No 384
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=88.21 E-value=8.4 Score=34.49 Aligned_cols=59 Identities=19% Similarity=0.254 Sum_probs=44.5
Q ss_pred HHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEcC
Q 023561 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~~ 253 (280)
+.....+|++|+-...|..|.+.+..++..|.+-++.+.. ++.|++.++.+|++-++..
T Consensus 51 ~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~ 111 (299)
T TIGR01136 51 KRGLLKPGDTIIEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTP 111 (299)
T ss_pred HcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 3444567777754455999999999999999976666654 3578999999999866543
No 385
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=88.19 E-value=1.6 Score=39.37 Aligned_cols=40 Identities=28% Similarity=0.202 Sum_probs=33.1
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcC-CCeEEEEcCChhHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIG 242 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~ 242 (280)
+++++|.|+ +++|...+..+...| . +|+.+++++++.+.+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~ 44 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQA 44 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHH
Confidence 678999998 999999888888889 7 888888887766544
No 386
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=88.13 E-value=1.4 Score=40.14 Aligned_cols=47 Identities=32% Similarity=0.396 Sum_probs=36.6
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
-.|++|.|+|-|.+|...++.++..|+ +|++..+.....+.++..|+
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~ 60 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGF 60 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCC
Confidence 457999999999999999999999999 78777655444445554454
No 387
>PRK13984 putative oxidoreductase; Provisional
Probab=88.12 E-value=1.6 Score=43.16 Aligned_cols=54 Identities=22% Similarity=0.277 Sum_probs=41.9
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHHcCCcEEEcC
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~---------------------~~~~~~~~~Ga~~vi~~ 253 (280)
.+.++.|+|+|+|+.|+.++..++..|. +|++++..+ ...+.++++|++.+++.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 354 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNT 354 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCC
Confidence 4568899999999999999999999999 788886543 13456677888665553
No 388
>PRK14982 acyl-ACP reductase; Provisional
Probab=88.10 E-value=1.5 Score=40.32 Aligned_cols=45 Identities=24% Similarity=0.266 Sum_probs=36.0
Q ss_pred CCCCCEEEEECc-cHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHH
Q 023561 199 VEVGSTVVIFGL-GSIGLAVAEGARL-CGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 199 ~~~g~~VlI~G~-g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~ 243 (280)
.-.+++|+|+|+ |.+|..+++.+.. .|..+++.+.++.+++..+.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La 198 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ 198 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH
Confidence 346789999998 9999988877764 57778999999887776654
No 389
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=87.98 E-value=1.3 Score=42.13 Aligned_cols=46 Identities=35% Similarity=0.466 Sum_probs=36.7
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
.+++|+|+|.|..|..++.+++..|+ .|.+.|........+++.|+
T Consensus 8 ~~~~i~viG~G~~G~~~a~~l~~~G~-~v~~~D~~~~~~~~l~~~g~ 53 (460)
T PRK01390 8 AGKTVAVFGLGGSGLATARALVAGGA-EVIAWDDNPASRAKAAAAGI 53 (460)
T ss_pred CCCEEEEEeecHhHHHHHHHHHHCCC-EEEEECCChhhHHHHHhcCc
Confidence 36789999999999999999999999 89999976544444555565
No 390
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=87.94 E-value=1.5 Score=43.77 Aligned_cols=48 Identities=25% Similarity=0.417 Sum_probs=42.6
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
.++|+|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~ 447 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVF 447 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEE
Confidence 3689999999999999999999999 89999999999999998886433
No 391
>PRK05855 short chain dehydrogenase; Validated
Probab=87.91 E-value=2.3 Score=41.25 Aligned_cols=41 Identities=27% Similarity=0.289 Sum_probs=34.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++++.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~ 355 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERT 355 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4578999998 9999998888888999 799999987766543
No 392
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=87.88 E-value=2.4 Score=36.92 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=26.8
Q ss_pred CCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcC
Q 023561 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDV 234 (280)
Q Consensus 201 ~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~ 234 (280)
.+++++|.|+ +++|...+..+...|+ +|+.+.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~ 40 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYL 40 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEec
Confidence 5789999996 4899998888888999 6776643
No 393
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=87.87 E-value=1.6 Score=37.48 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=30.8
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
++++|.|+ |++|...++.+...|+ +|+.+++++++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~ 38 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAK 38 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 47899998 9999999988888999 7888888765543
No 394
>PRK07985 oxidoreductase; Provisional
Probab=87.87 E-value=2.3 Score=37.87 Aligned_cols=35 Identities=20% Similarity=0.062 Sum_probs=29.4
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
-++++++|.|+ |++|...++.+...|+ +|+++.++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~ 82 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLP 82 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCC
Confidence 35689999998 9999999988888999 78777653
No 395
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=87.86 E-value=0.49 Score=37.53 Aligned_cols=33 Identities=42% Similarity=0.557 Sum_probs=27.2
Q ss_pred EEEECccHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 205 VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
++|+|+|.++...+++++.+|+ +|++++..+++
T Consensus 1 L~I~GaG~va~al~~la~~lg~-~v~v~d~r~e~ 33 (136)
T PF13478_consen 1 LVIFGAGHVARALARLAALLGF-RVTVVDPRPER 33 (136)
T ss_dssp EEEES-STCHHHHHHHHHHCTE-EEEEEES-CCC
T ss_pred CEEEeCcHHHHHHHHHHHhCCC-EEEEEcCCccc
Confidence 4788999999999999999999 88888877653
No 396
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=87.86 E-value=1.2 Score=39.91 Aligned_cols=37 Identities=19% Similarity=0.083 Sum_probs=30.4
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.|++|||+|+ |.+|...+..+...|. +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4789999998 9999998888888898 78777666543
No 397
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=87.86 E-value=2.6 Score=30.19 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=29.8
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~ 234 (280)
.++++++|+|.|.+|...++.+...+...+.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 56789999999999999999998886557888876
No 398
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=87.84 E-value=1.6 Score=39.88 Aligned_cols=39 Identities=18% Similarity=0.045 Sum_probs=32.2
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF 239 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~ 239 (280)
..+.+|||+|+ |.+|...++.+...|. +|++++++.++.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~ 47 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKS 47 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHH
Confidence 45689999998 9999999998888898 788887765543
No 399
>PLN02686 cinnamoyl-CoA reductase
Probab=87.83 E-value=1.5 Score=40.55 Aligned_cols=44 Identities=18% Similarity=0.055 Sum_probs=34.2
Q ss_pred CCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 199 ~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
...+++|||+|+ |.+|...+..+...|. +|+++.++.++.+.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 355789999998 9999999998888999 7877666655544433
No 400
>PRK06141 ornithine cyclodeaminase; Validated
Probab=87.82 E-value=2.5 Score=38.34 Aligned_cols=46 Identities=13% Similarity=0.037 Sum_probs=35.5
Q ss_pred CCCCCCEEEEECccHHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHH
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~~ 243 (280)
.-...++++|+|+|..|...+..+. ..+.++|.+..++.+|.+.+.
T Consensus 121 a~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a 167 (314)
T PRK06141 121 ARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALA 167 (314)
T ss_pred CCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHH
Confidence 3356789999999999998876444 467779999999988755543
No 401
>PRK09135 pteridine reductase; Provisional
Probab=87.81 E-value=1.8 Score=36.81 Aligned_cols=34 Identities=24% Similarity=0.172 Sum_probs=29.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.++++||+|+ |.+|...+..+...|+ +|++++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4689999998 9999998888888899 78888875
No 402
>PLN02583 cinnamoyl-CoA reductase
Probab=87.78 E-value=1.4 Score=39.21 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=29.9
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.++++|||+|+ |.+|...+..+...|. +|+++.++
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~-~V~~~~R~ 39 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGY-TVHAAVQK 39 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEEcC
Confidence 34678999998 9999999998888999 78888774
No 403
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.76 E-value=4.2 Score=36.44 Aligned_cols=71 Identities=14% Similarity=0.104 Sum_probs=47.4
Q ss_pred ccchhhHHHHHHHHHHcC-CCCCCEEEEECccH-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEEEcCC
Q 023561 181 LLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 181 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~G~g~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~ 254 (280)
.++|+....+. +++..+ --.|++++|+|.|. +|.-.+.++...|+ +|+++.+....++.. -..+|-+|+.-
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~l~~~-~~~ADIVIsAv 209 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKDMASY-LKDADVIVSAV 209 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchhHHHH-HhhCCEEEECC
Confidence 45665555555 444444 35789999999955 99999999999999 788887654333221 14456666543
No 404
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=87.74 E-value=2.3 Score=42.85 Aligned_cols=41 Identities=24% Similarity=0.221 Sum_probs=34.7
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.++++||+|+ |++|...++.+...|+ +|++++++.++.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~ 454 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAV 454 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHH
Confidence 4689999998 9999999988888899 899999887765544
No 405
>PRK07340 ornithine cyclodeaminase; Validated
Probab=87.70 E-value=3.5 Score=37.19 Aligned_cols=45 Identities=11% Similarity=-0.040 Sum_probs=36.1
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHH
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~ 243 (280)
-....+++|+|+|..|...+..+.. .+.++|.+.+++.+|.+.+.
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a 167 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFC 167 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH
Confidence 3566899999999999998887764 78888999999988755443
No 406
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=87.67 E-value=1.5 Score=43.50 Aligned_cols=47 Identities=17% Similarity=0.321 Sum_probs=42.0
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v 250 (280)
++|+|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~ 447 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVY 447 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEE
Confidence 689999999999999999999999 89999999999999998886433
No 407
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=87.66 E-value=2.2 Score=40.93 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=38.8
Q ss_pred CCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHHcCCc
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVT 248 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~Ga~ 248 (280)
..-.+++|+|+|.|..|.+++.+++..|+ .|++.|++..+.. +++++|+.
T Consensus 11 ~~~~~~~v~v~G~G~sG~a~a~~L~~~G~-~V~~~D~~~~~~~~~l~~~gi~ 61 (473)
T PRK00141 11 PQELSGRVLVAGAGVSGRGIAAMLSELGC-DVVVADDNETARHKLIEVTGVA 61 (473)
T ss_pred ccccCCeEEEEccCHHHHHHHHHHHHCCC-EEEEECCChHHHHHHHHhcCcE
Confidence 34456789999999999999999999999 8999997655443 34556664
No 408
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=87.64 E-value=1.6 Score=38.80 Aligned_cols=43 Identities=28% Similarity=0.349 Sum_probs=36.6
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
+|.|+|.|.+|...+..++..|. .|+++++++++.+.+.+.|.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~ 44 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGL 44 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCC
Confidence 58899999999988888887888 89999999988888877664
No 409
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=87.61 E-value=7.5 Score=36.15 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=45.2
Q ss_pred HHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEc
Q 023561 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVN 252 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~ 252 (280)
+...+.+|.+.+|... |..|++.+..++.+|.+-++++.. +.+|++.++.+|++-++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~ 163 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLT 163 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEE
Confidence 4555778876667665 999999999999999965555543 468999999999987654
No 410
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=87.57 E-value=1.6 Score=38.85 Aligned_cols=39 Identities=23% Similarity=0.333 Sum_probs=32.7
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+|.|+|+|.+|...++.+...|. +|+.+++++++++.+
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~ 42 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKA 42 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence 479999999999998888888888 899999988765544
No 411
>PRK01581 speE spermidine synthase; Validated
Probab=87.54 E-value=3.4 Score=38.34 Aligned_cols=45 Identities=24% Similarity=0.237 Sum_probs=35.6
Q ss_pred CCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 199 ~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
....++|||+|+| .|.++..+++..+..+|++++.+++-.+.+++
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~ 192 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARN 192 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Confidence 3455799999865 46677777777666799999999998998886
No 412
>PLN03139 formate dehydrogenase; Provisional
Probab=87.53 E-value=1.4 Score=41.28 Aligned_cols=45 Identities=24% Similarity=0.300 Sum_probs=35.8
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 246 (280)
.|++|.|+|.|.+|...++.++.+|+ +|++.++.....+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57899999999999999999999999 8899987643333333444
No 413
>PRK05650 short chain dehydrogenase; Provisional
Probab=87.53 E-value=1.6 Score=38.07 Aligned_cols=38 Identities=32% Similarity=0.218 Sum_probs=31.3
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++++|+|+ |++|...+..+...|. +|+.++++.++.+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~ 39 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEE 39 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 36899998 9999998888888899 78888888766543
No 414
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=87.51 E-value=1.6 Score=37.83 Aligned_cols=39 Identities=28% Similarity=0.170 Sum_probs=30.6
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc-CChhHH
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKF 239 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~ 239 (280)
-++++++|.|+ +++|...+..+...|+ +|+.+. +++++.
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 46 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEA 46 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHH
Confidence 35789999998 9999999988888999 677664 344443
No 415
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=87.47 E-value=2.1 Score=34.65 Aligned_cols=44 Identities=27% Similarity=0.311 Sum_probs=36.6
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
.+|.++|.|.+|...+.-+...|. +|.+.++++++.+.+.+.|+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTE
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhh
Confidence 368899999999998888888999 89999999999988887774
No 416
>PRK06924 short chain dehydrogenase; Provisional
Probab=87.43 E-value=3.2 Score=35.56 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=30.8
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIG 242 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~ 242 (280)
++++|+|+ |++|...++.+...|+ +|+++++++ ++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~ 42 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT-HVISISRTENKELTKL 42 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC-EEEEEeCCchHHHHHH
Confidence 47899998 9999998888888899 788888876 444433
No 417
>PRK12810 gltD glutamate synthase subunit beta; Reviewed
Probab=87.29 E-value=2.3 Score=40.78 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=30.4
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
+.+++|+|+|+|+.|+.++..++..|. +|++++..
T Consensus 141 ~~~~~VvIIGaGpAGl~aA~~l~~~G~-~V~vie~~ 175 (471)
T PRK12810 141 RTGKKVAVVGSGPAGLAAADQLARAGH-KVTVFERA 175 (471)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEecC
Confidence 456899999999999999999999999 78888754
No 418
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=87.21 E-value=7.9 Score=34.61 Aligned_cols=60 Identities=22% Similarity=0.238 Sum_probs=44.4
Q ss_pred HHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEcCC
Q 023561 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNSK 254 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~~~ 254 (280)
+...+.+|++|+-..+|..|.+.+..++..|.+-.+.+.. ++.|+++++.+|++-++...
T Consensus 50 ~~g~~~~g~~vv~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 111 (298)
T TIGR01139 50 KRGLLKPGKTIVEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPG 111 (298)
T ss_pred HcCCCCCCCEEEEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECC
Confidence 4444567777644445999999999999999965566654 35689999999997666543
No 419
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=87.20 E-value=0.99 Score=40.46 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=27.0
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.|+|+|+|+.|++++.+++..|. .|+++++.+
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G~-~v~i~E~~~ 34 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAGI-DVTIIERRP 34 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhccc-ccccchhcc
Confidence 48899999999999999999999 899998864
No 420
>PRK05599 hypothetical protein; Provisional
Probab=87.13 E-value=3.7 Score=35.39 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=29.6
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++|.|+ +++|...+..+. .|. +|+.+++++++++.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~ 39 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGL 39 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHH
Confidence 36899998 999988776655 487 888888888776544
No 421
>PRK08618 ornithine cyclodeaminase; Validated
Probab=87.13 E-value=3.1 Score=37.85 Aligned_cols=46 Identities=17% Similarity=0.048 Sum_probs=35.4
Q ss_pred CCCCCCEEEEECccHHHHHHHHH-HHHcCCCeEEEEcCChhHHHHHH
Q 023561 198 NVEVGSTVVIFGLGSIGLAVAEG-ARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~a~~l-a~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
..+..++++|+|+|..|...+.. +...+++.|.+++++++|.+.+.
T Consensus 123 a~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~ 169 (325)
T PRK08618 123 AREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFA 169 (325)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHH
Confidence 33566899999999999877654 44678889999999988765443
No 422
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=87.05 E-value=0.76 Score=34.39 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=30.0
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.|++|||+|+|.+|..-++.+...|+ +|+++....
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~ 40 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI 40 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch
Confidence 57899999999999999999999999 888887763
No 423
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=87.01 E-value=1.2 Score=38.72 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=31.0
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.+++++|.|+ |++|...+..+...|+ +|+.+++++++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~ 45 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGD 45 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCccc
Confidence 4689999998 9999999998888999 78888776543
No 424
>PRK07201 short chain dehydrogenase; Provisional
Probab=87.00 E-value=2.4 Score=42.14 Aligned_cols=40 Identities=30% Similarity=0.289 Sum_probs=34.1
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
+++++|+|+ |++|...+..+...|+ +|+++++++++++.+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 411 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDEL 411 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence 678999998 9999999888888899 899999988775544
No 425
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=87.00 E-value=2 Score=35.70 Aligned_cols=44 Identities=20% Similarity=0.236 Sum_probs=38.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 245 (280)
.|..|++.|+ -++|...++-+...|+ .||++.++++.+..+-+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e 50 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE 50 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence 5789999998 6899999999999999 899999999887776553
No 426
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=86.93 E-value=1.5 Score=40.01 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=31.5
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
++++|||.|+ |.+|...+..+...|. +|++++++...
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~ 40 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPT 40 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCcc
Confidence 4789999998 9999999999988998 78888876543
No 427
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=86.92 E-value=3.4 Score=35.22 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=26.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV 234 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~ 234 (280)
.+++++|.|+ |++|...+..+...|+ +|+++.+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~ 38 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYN 38 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcC
Confidence 4789999998 9999999888888899 6665543
No 428
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.87 E-value=1.9 Score=39.34 Aligned_cols=38 Identities=21% Similarity=0.196 Sum_probs=32.8
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
++|.|+|+|.+|...++.+...|. .|++.+.+++.++.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 689999999999998888888999 89999998765443
No 429
>PRK07574 formate dehydrogenase; Provisional
Probab=86.83 E-value=1.7 Score=40.72 Aligned_cols=35 Identities=34% Similarity=0.369 Sum_probs=31.9
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.|++|.|+|.|.+|...++.++.+|+ +|++.++..
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~ 225 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHR 225 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCC
Confidence 46899999999999999999999999 899999865
No 430
>PRK12746 short chain dehydrogenase; Provisional
Probab=86.83 E-value=1.8 Score=37.14 Aligned_cols=38 Identities=21% Similarity=0.130 Sum_probs=29.9
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEE-EcCChhHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKF 239 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~ 239 (280)
.+++++|.|+ |++|...++.+...|. +|++ ..+++++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHH
Confidence 4689999998 9999999988888898 6655 45666554
No 431
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=86.76 E-value=4.1 Score=38.22 Aligned_cols=59 Identities=20% Similarity=0.220 Sum_probs=41.4
Q ss_pred hhhhcccchhhHHHHHHHHHHcCC-CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 176 PNRACLLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 176 ~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
..+|....+.+.+- .+...... -+|.+|.|.|-|.+|..+++.+...|+ +|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~--~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 182 RSEATGYGVFYAIR--EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCcccceehHHHHH--HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 34555555443333 23444454 589999999999999999999999999 6666665543
No 432
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=86.71 E-value=1.4 Score=40.97 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=27.4
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.|+|+|+|+.|++++..+...|. +|++++..+
T Consensus 4 dV~IVGaG~aGl~~A~~L~~~G~-~v~viE~~~ 35 (405)
T PRK05714 4 DLLIVGAGMVGSALALALQGSGL-EVLLLDGGP 35 (405)
T ss_pred cEEEECccHHHHHHHHHHhcCCC-EEEEEcCCC
Confidence 58999999999998888888898 899988654
No 433
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=86.64 E-value=6.7 Score=33.75 Aligned_cols=77 Identities=16% Similarity=0.164 Sum_probs=60.1
Q ss_pred HHHHcCCCCCCEEEEE-CccHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcC
Q 023561 193 AWRTANVEVGSTVVIF-GLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYD 270 (280)
Q Consensus 193 l~~~~~~~~g~~VlI~-G~g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~ 270 (280)
.++.+.+..=+.+++. |..-+-+.++++++. .|..++++-.++++..+.++++|+++++++.. .....+.+...
T Consensus 58 ~L~~agi~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~~~~~~~~~~~g~~~ii~Pe~----~~~~~l~~~i~ 133 (225)
T COG0569 58 VLEEAGIDDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARNPEHEKVLEKLGADVIISPEK----LAAKRLARLIV 133 (225)
T ss_pred HHHhcCCCcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecCHHHHHHHHHcCCcEEECHHH----HHHHHHHHHhc
Confidence 4566677777776554 667888889999977 89989999999999999999999999998873 56666666544
Q ss_pred C-Cc
Q 023561 271 L-PL 273 (280)
Q Consensus 271 g-g~ 273 (280)
. +.
T Consensus 134 ~p~~ 137 (225)
T COG0569 134 TPGA 137 (225)
T ss_pred CCCh
Confidence 4 43
No 434
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=86.63 E-value=2.2 Score=36.90 Aligned_cols=44 Identities=25% Similarity=0.354 Sum_probs=33.1
Q ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcC
Q 023561 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (280)
Q Consensus 202 g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 246 (280)
|+.+++.|+ |++|+.....+...|+ .+.+++-+.|+.+...++-
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ 49 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQ 49 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHh
Confidence 889999987 9999999988888999 4555555556555555543
No 435
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=86.62 E-value=1.4 Score=30.33 Aligned_cols=29 Identities=31% Similarity=0.299 Sum_probs=25.0
Q ss_pred EECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 207 IFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 207 I~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
|+|+|..|+.++..++..|. +|.++++.+
T Consensus 1 IiGaG~sGl~aA~~L~~~g~-~v~v~E~~~ 29 (68)
T PF13450_consen 1 IIGAGISGLAAAYYLAKAGY-RVTVFEKND 29 (68)
T ss_dssp EES-SHHHHHHHHHHHHTTS-EEEEEESSS
T ss_pred CEeeCHHHHHHHHHHHHCCC-cEEEEecCc
Confidence 67999999999999998999 999998765
No 436
>PRK12747 short chain dehydrogenase; Provisional
Probab=86.61 E-value=2.2 Score=36.65 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=29.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc-CChhHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKF 239 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~ 239 (280)
.+++++|+|+ +++|...++.+...|+ +|+++. +.+++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4789999998 9999999998888999 676653 444443
No 437
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=86.60 E-value=3.6 Score=39.64 Aligned_cols=41 Identities=22% Similarity=0.212 Sum_probs=35.2
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+++++|+|+|++|.+++..+...|+ ++++.+++.++.+.+
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G~-~V~i~~R~~~~~~~l 371 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAGA-ELLIFNRTKAHAEAL 371 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 56899999999999999999999999 888888887776554
No 438
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=86.58 E-value=4.9 Score=33.24 Aligned_cols=76 Identities=20% Similarity=0.180 Sum_probs=43.9
Q ss_pred HcCCCCCCEEEEECccHHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHcCCcEEEcCCCCCCccHHHHHHHhcCC-Cc
Q 023561 196 TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQVLLSIYDL-PL 273 (280)
Q Consensus 196 ~~~~~~g~~VlI~G~g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~ 273 (280)
...+++|++||.+|+|.-++ +..+++. .+..+|+++|.++.+ ...++. ++..+- .+....+.+++..+. ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~-~~~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDF-TDEEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeC-CChhHHHHHHHHhCCCCc
Confidence 34568999999999866444 4444443 344479999988754 123443 332221 114445566665655 67
Q ss_pred eEEEe
Q 023561 274 LTISV 278 (280)
Q Consensus 274 ~~v~~ 278 (280)
|.|..
T Consensus 100 D~V~~ 104 (188)
T TIGR00438 100 DVVMS 104 (188)
T ss_pred cEEEc
Confidence 66653
No 439
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=86.57 E-value=1.6 Score=34.11 Aligned_cols=34 Identities=32% Similarity=0.420 Sum_probs=29.9
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
..+|+|+|+|++|...+..+...|..+++.+|.+
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 3689999999999999999999999999999865
No 440
>PRK06849 hypothetical protein; Provisional
Probab=86.53 E-value=3.6 Score=38.28 Aligned_cols=72 Identities=22% Similarity=0.180 Sum_probs=46.0
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCCcEE--Ec-CCCCCCccHHHHHHHhcCC-CceE
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF--VN-SKNCGDKSVSQVLLSIYDL-PLLT 275 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga~~v--i~-~~~~~~~~~~~~v~~~~~g-g~~~ 275 (280)
...+|||+|+ .+.|+..+..++..|. +|++++..+...... +..+++. +. ++. +++.+.+.+.++... +++.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~-s~~~d~~~~~p~p~~-d~~~~~~~L~~i~~~~~id~ 79 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRF-SRAVDGFYTIPSPRW-DPDAYIQALLSIVQRENIDL 79 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHH-HHhhhheEEeCCCCC-CHHHHHHHHHHHHHHcCCCE
Confidence 4589999998 6789999999999999 899998775443321 1222322 21 221 224566777776544 5543
No 441
>PLN02928 oxidoreductase family protein
Probab=86.48 E-value=1.5 Score=40.47 Aligned_cols=34 Identities=32% Similarity=0.615 Sum_probs=31.5
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.|+++.|+|.|.+|...++.++.+|+ +|++++++
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~ 191 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRS 191 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCC
Confidence 47899999999999999999999999 89999875
No 442
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=86.45 E-value=2.9 Score=30.28 Aligned_cols=43 Identities=30% Similarity=0.408 Sum_probs=33.8
Q ss_pred EEEEECccHHHHHHHHHHHHcC---CCeEE-EEcCChhHHHHHH-HcCC
Q 023561 204 TVVIFGLGSIGLAVAEGARLCG---ATRII-GVDVISEKFEIGK-RFGV 247 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g---~~~vi-~~~~~~~~~~~~~-~~Ga 247 (280)
+|.|+|.|.+|.+.+.-+...| . +|+ +..+++++.+.+. ++++
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~ 48 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGV 48 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcc
Confidence 4778899999999888888888 5 676 5489998887774 4664
No 443
>PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ]. Trimethylguanosine synthase is specific for guanine, and N7 methylation must precede N2 methylation. This enzyme is required for pre-mRNA splicing, pre-rRNA processing and small ribosomal subunit synthesis. As such, this enzyme plays a role in transcriptional regulation. ; GO: 0008168 methyltransferase activity, 0001510 RNA methylation, 0009452 RNA capping; PDB: 3EGI_B 3GDH_A.
Probab=86.37 E-value=0.65 Score=38.06 Aligned_cols=70 Identities=20% Similarity=0.265 Sum_probs=40.9
Q ss_pred EEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----cCCcEEEcCCCCCCccHHHHHHHhcCC-CceEEEec
Q 023561 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQVLLSIYDL-PLLTISVS 279 (280)
Q Consensus 205 VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~Ga~~vi~~~~~~~~~~~~~v~~~~~g-g~~~v~~~ 279 (280)
+++.+-+++|--++|+|+. +.+|++++.++.|.+.++. +|...-++.-. .++.+.+.++... .+|.|++|
T Consensus 2 ~vlD~fcG~GGNtIqFA~~--~~~Viaidid~~~~~~a~hNa~vYGv~~~I~~i~---gD~~~~~~~~~~~~~~D~vFlS 76 (163)
T PF09445_consen 2 TVLDAFCGVGGNTIQFART--FDRVIAIDIDPERLECAKHNAEVYGVADNIDFIC---GDFFELLKRLKSNKIFDVVFLS 76 (163)
T ss_dssp EEEETT-TTSHHHHHHHHT--T-EEEEEES-HHHHHHHHHHHHHTT-GGGEEEEE---S-HHHHGGGB------SEEEE-
T ss_pred EEEEeccCcCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEe---CCHHHHHhhccccccccEEEEC
Confidence 4566667778899999998 4589999999999999974 77532112222 4566666555433 24666543
No 444
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=86.36 E-value=2.9 Score=35.73 Aligned_cols=35 Identities=40% Similarity=0.474 Sum_probs=30.3
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
+++++||+|+ |.+|...+..+...|. +|++++++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch
Confidence 4689999998 9999999988888899 888888765
No 445
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=86.18 E-value=1.5 Score=38.25 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.1
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
..+|+|.|+|++|..++..+..+|..+++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 37899999999999999999999999999988753
No 446
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=86.15 E-value=1.7 Score=39.01 Aligned_cols=37 Identities=19% Similarity=0.113 Sum_probs=30.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.++++||+|+ |.+|...+..+...|. .|+++.++.++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~ 41 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKD 41 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcc
Confidence 4789999998 9999999988888899 77777666543
No 447
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=86.11 E-value=4.6 Score=38.18 Aligned_cols=45 Identities=22% Similarity=0.121 Sum_probs=39.0
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHc
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 245 (280)
...++++|+|.|.+|...++.+...|. .|++++.++++.+.+++.
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~ 273 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEE 273 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHH
Confidence 346889999999999999999998899 899999999988877764
No 448
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=86.11 E-value=1.5 Score=40.05 Aligned_cols=47 Identities=26% Similarity=0.272 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 188 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 188 ta~~~l~~~~~~~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
|+|--+... -..++++|||+|+ |.+|...+..+...|. .|+++++..
T Consensus 2 ~~~~~~~~~-~~~~~~~vlVtGatGfiG~~lv~~L~~~g~-~V~~~d~~~ 49 (348)
T PRK15181 2 TAYEELRTK-LVLAPKRWLITGVAGFIGSGLLEELLFLNQ-TVIGLDNFS 49 (348)
T ss_pred chhhhhhhc-ccccCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 455533222 3345579999998 9999999999988898 888888643
No 449
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit or homologous region. TIGR01316 describes a family in several archaeal and deeply branched bacterial lineages of a homotetrameric form for which there is no large subunit. Another model describes glutamate synthase small subunit from gamma and some alpha subdivision Proteobacteria plus paralogs of unknown function. This model describes the small subunit, or homologous region of longer forms proteins, of eukaryotes, Gram-positive bacteria, cyanobacteria, and some other lineages. All members with known function participate in NADH or NADPH-dependent reactions to interconvert between glutamine plus 2-oxoglutarate and two molecules of glutamate.
Probab=86.10 E-value=2.6 Score=40.67 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=29.8
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
..+++|+|+|+|+.|+.++..++..|. .|++++..
T Consensus 141 ~~~~~V~IIGaG~aGl~aA~~L~~~g~-~V~v~e~~ 175 (485)
T TIGR01317 141 RTGKKVAVVGSGPAGLAAADQLNRAGH-TVTVFERE 175 (485)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEecC
Confidence 356899999999999999999999998 67777643
No 450
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=86.05 E-value=3.9 Score=34.74 Aligned_cols=36 Identities=17% Similarity=-0.009 Sum_probs=27.9
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEE-EcCChhHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKF 239 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~ 239 (280)
++++|+|+ |++|...+..+...|+ +|++ ..+++++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~ 39 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAA 39 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHH
Confidence 47899998 9999999988888899 6655 45555543
No 451
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=86.02 E-value=3.2 Score=35.42 Aligned_cols=59 Identities=25% Similarity=0.326 Sum_probs=38.8
Q ss_pred cchhhHHHHHHHHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHH
Q 023561 182 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK 243 (280)
Q Consensus 182 l~~~~~ta~~~l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~ 243 (280)
++.+...|. +.+.+.+++|++||-+|+|. |..++-+++..|.. .|+.++..++-.+.++
T Consensus 55 is~P~~~a~--~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~ 114 (209)
T PF01135_consen 55 ISAPSMVAR--MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERAR 114 (209)
T ss_dssp E--HHHHHH--HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHH
T ss_pred chHHHHHHH--HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHH
Confidence 343444443 56788899999999999754 77888888887754 5899998876544443
No 452
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=86.02 E-value=2.3 Score=35.99 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=28.3
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC-ChhH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEK 238 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~-~~~~ 238 (280)
+++||+|+ |++|...+..+...|+ +++++.+ ++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~ 37 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEER 37 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHH
Confidence 47899998 9999999988888999 7777766 4443
No 453
>PRK14967 putative methyltransferase; Provisional
Probab=85.99 E-value=3.7 Score=35.07 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=37.2
Q ss_pred HHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
....++++++||-.|+|. |..++.+++. +..++++++.+++.++.+++
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~ 77 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARL 77 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHH
Confidence 445678889999999876 8888888775 55589999999887765543
No 454
>PLN02778 3,5-epimerase/4-reductase
Probab=85.98 E-value=3 Score=37.37 Aligned_cols=53 Identities=17% Similarity=0.023 Sum_probs=37.2
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH----HHHHHHcCCcEEEcCC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK----FEIGKRFGVTEFVNSK 254 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~----~~~~~~~Ga~~vi~~~ 254 (280)
...+|||+|+ |.+|...++.+...|. .|+.....-.. ...++..+.+.||+..
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~-~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGI-DFHYGSGRLENRASLEADIDAVKPTHVFNAA 65 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCC-EEEEecCccCCHHHHHHHHHhcCCCEEEECC
Confidence 3468999998 9999999999998998 66654332222 2233456788888654
No 455
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=85.95 E-value=1.6 Score=36.89 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=31.6
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
...+|+|+|.|++|...++.+..+|..+++.+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 35789999999999999999999999999999876
No 456
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=85.85 E-value=2.1 Score=34.78 Aligned_cols=32 Identities=34% Similarity=0.381 Sum_probs=27.6
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEc
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~ 233 (280)
.|++|+|+|+|.+|.--++.+...|+ .|++++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs 43 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS 43 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc
Confidence 57899999999999988888888899 777774
No 457
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=85.76 E-value=3.3 Score=34.64 Aligned_cols=53 Identities=26% Similarity=0.335 Sum_probs=41.5
Q ss_pred HHcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HcCCc
Q 023561 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT 248 (280)
Q Consensus 195 ~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~Ga~ 248 (280)
..+++++|+.++=+|+|. |..++++++.....+|+++++++++++..+ +||.+
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~ 84 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVD 84 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCC
Confidence 467889999887778754 667788886665669999999999887775 48876
No 458
>PRK06753 hypothetical protein; Provisional
Probab=85.72 E-value=1.2 Score=40.77 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=28.2
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.|+|+|+|+.|++++..++..|. +|+++++.+
T Consensus 2 ~V~IvGgG~aGl~~A~~L~~~g~-~v~v~E~~~ 33 (373)
T PRK06753 2 KIAIIGAGIGGLTAAALLQEQGH-EVKVFEKNE 33 (373)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Confidence 58999999999999998998999 788888664
No 459
>PRK08328 hypothetical protein; Provisional
Probab=85.68 E-value=1.6 Score=37.75 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=30.6
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
+.+|+|+|+|++|..++..+..+|..+++.+|.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999999999854
No 460
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=85.67 E-value=7.8 Score=30.45 Aligned_cols=35 Identities=26% Similarity=0.298 Sum_probs=27.3
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
++++|.|+ |++|...+..+...|...|+.+.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 36889998 999999888888888756777766543
No 461
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=85.67 E-value=4.5 Score=35.10 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=29.0
Q ss_pred CCCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
-.+++++|.|+ +++|...+..+...|+ +|+.++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~ 42 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFG 42 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCc
Confidence 35789999985 6999998888888999 78888765
No 462
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.56 E-value=5.8 Score=33.80 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=26.0
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEc
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~ 233 (280)
.++++||.|+ |.+|...+..+...|+ +++.+.
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~ 37 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNA 37 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEe
Confidence 3689999998 9999998888888999 565554
No 463
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.56 E-value=2.4 Score=37.78 Aligned_cols=39 Identities=28% Similarity=0.495 Sum_probs=33.3
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (280)
.+|.|+|+|.+|...+..+...|. .|++.++++++++.+
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~ 43 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGY-DVLLNDVSADRLEAG 43 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 579999999999998888888898 899999998776553
No 464
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=85.56 E-value=2.1 Score=38.23 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=33.8
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHcCC
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~Ga 247 (280)
+|+|+|+|.+|.+.+..+...|. .|+.+++ +++.+.+++.|.
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~-~V~~~~r-~~~~~~~~~~g~ 43 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGR-DVTFLVR-PKRAKALRERGL 43 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-ceEEEec-HHHHHHHHhCCe
Confidence 58999999999987777777787 7888888 777777776553
No 465
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.52 E-value=2.4 Score=38.16 Aligned_cols=40 Identities=23% Similarity=0.414 Sum_probs=33.4
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
.+|.|+|+|.+|...+..+...|. .|+++++++++.+.++
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~-~V~~~d~~~~~~~~~~ 44 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGL-QVVLIDVMEGALERAR 44 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHH
Confidence 579999999999988888888898 8999999887766554
No 466
>PRK13243 glyoxylate reductase; Reviewed
Probab=85.50 E-value=2.4 Score=38.84 Aligned_cols=36 Identities=39% Similarity=0.516 Sum_probs=32.3
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
.|++|.|+|.|.+|...++.++.+|+ +|++.++..+
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRK 184 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCC
Confidence 57899999999999999999999999 8999987643
No 467
>PRK08163 salicylate hydroxylase; Provisional
Probab=85.45 E-value=1.4 Score=40.88 Aligned_cols=34 Identities=26% Similarity=0.250 Sum_probs=29.5
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
...|+|+|+|+.|++++..++..|. +|.++++.+
T Consensus 4 ~~~V~IvGaGiaGl~~A~~L~~~g~-~v~v~Er~~ 37 (396)
T PRK08163 4 VTPVLIVGGGIGGLAAALALARQGI-KVKLLEQAA 37 (396)
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-cEEEEeeCc
Confidence 3579999999999999999999999 788888754
No 468
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=85.43 E-value=2.3 Score=38.32 Aligned_cols=38 Identities=26% Similarity=0.161 Sum_probs=32.5
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+|.|+|+|.+|...++.+...|. +|+++++++++.+.
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~-~V~v~d~~~~~~~~ 40 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGH-EVRLWDADPAAAAA 40 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCC-eeEEEeCCHHHHHH
Confidence 368999999999998888888898 89999999876654
No 469
>PRK06847 hypothetical protein; Provisional
Probab=85.41 E-value=1.4 Score=40.36 Aligned_cols=34 Identities=29% Similarity=0.280 Sum_probs=29.4
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
...|+|+|+|+.|++++..++..|. +|+++++.+
T Consensus 4 ~~~V~IVGaG~aGl~~A~~L~~~g~-~v~v~E~~~ 37 (375)
T PRK06847 4 VKKVLIVGGGIGGLSAAIALRRAGI-AVDLVEIDP 37 (375)
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 3579999999999999999999999 788888654
No 470
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=85.40 E-value=2.2 Score=38.92 Aligned_cols=36 Identities=36% Similarity=0.484 Sum_probs=32.5
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
.|+++.|+|.|.+|.+.++.++..|+ +|+..++...
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~ 180 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN 180 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC
Confidence 48999999999999999999999999 8999987753
No 471
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=85.39 E-value=3.8 Score=35.00 Aligned_cols=37 Identities=27% Similarity=0.073 Sum_probs=27.9
Q ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCeEEEE-cCChhHHH
Q 023561 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFE 240 (280)
Q Consensus 203 ~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~ 240 (280)
+++||.|+ |++|...++.+...|+ .++++ .+++++.+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~ 41 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAE 41 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHH
Confidence 58999998 9999998888888898 56554 45555443
No 472
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=85.38 E-value=2 Score=36.48 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=30.2
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
.|++|+|+|+|.+|..-+..+...|+ .|++++...
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~ 42 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEEL 42 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 47899999999999999999999999 788886643
No 473
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=85.37 E-value=2.6 Score=36.47 Aligned_cols=35 Identities=26% Similarity=0.110 Sum_probs=29.2
Q ss_pred CCCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 200 ~~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
-++++++|.|+ |++|...++.+...|+ +++++.++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~ 40 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRS 40 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 35789999998 9999999999999999 66666653
No 474
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=85.32 E-value=2.5 Score=37.70 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=32.6
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
++|.|+|+|.+|...++.+...|. .|+++++++++++
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~ 41 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGM-DVWLLDSDPAALS 41 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHH
Confidence 579999999999998888888898 8999999987765
No 475
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.31 E-value=5.2 Score=34.56 Aligned_cols=33 Identities=24% Similarity=0.260 Sum_probs=27.2
Q ss_pred CCCCEEEEECc-c--HHHHHHHHHHHHcCCCeEEEEc
Q 023561 200 EVGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVD 233 (280)
Q Consensus 200 ~~g~~VlI~G~-g--~~G~~a~~la~~~g~~~vi~~~ 233 (280)
-+|++++|+|+ + ++|...+..+...|+ +|++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~ 39 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTY 39 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEe
Confidence 45789999998 3 799999988888999 677764
No 476
>PRK09134 short chain dehydrogenase; Provisional
Probab=85.27 E-value=2.8 Score=36.18 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=29.1
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcC-ChhHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKF 239 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~ 239 (280)
.++++||.|+ |++|...+..+...|+ +++++.+ +.++.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~ 47 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEA 47 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHH
Confidence 4679999998 9999998888888898 6666544 44443
No 477
>PLN02650 dihydroflavonol-4-reductase
Probab=85.25 E-value=2 Score=39.21 Aligned_cols=39 Identities=18% Similarity=0.072 Sum_probs=31.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (280)
..++|||+|+ |.+|...+..+...|. +|+++.++.++.+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~-~V~~~~r~~~~~~ 43 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPANVK 43 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCC-EEEEEEcCcchhH
Confidence 4578999998 9999999988888898 7888777654443
No 478
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=85.24 E-value=2 Score=38.73 Aligned_cols=41 Identities=20% Similarity=0.113 Sum_probs=32.8
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
.+|+|+|+|++|...+..+...|. .|..+++..++++.+++
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~ 43 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQ 43 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhh
Confidence 369999999999877666667788 78889888777777765
No 479
>PRK04457 spermidine synthase; Provisional
Probab=85.24 E-value=5.3 Score=35.24 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=35.7
Q ss_pred CCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 023561 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 200 ~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (280)
.++++||++|.|+ |.++..+++.....++++++.+++-.+.+++
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~ 108 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARN 108 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHH
Confidence 4568899999864 7778888887754489999999999988887
No 480
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=85.21 E-value=1.9 Score=38.77 Aligned_cols=73 Identities=22% Similarity=0.171 Sum_probs=43.9
Q ss_pred EEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-c----C---CcEEEcCCCCCCccHHHHHHHhcCC-Cce
Q 023561 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----G---VTEFVNSKNCGDKSVSQVLLSIYDL-PLL 274 (280)
Q Consensus 205 VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G---a~~vi~~~~~~~~~~~~~v~~~~~g-g~~ 274 (280)
|||+|+ |.+|...+.-+...+.+.++.+++++.++-.++. + . ....+.+.- .+-...+.+.+.... +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vi-gDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVI-GDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--C-TSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCcee-ecccCHHHHHHHHhhcCCC
Confidence 799998 9999988877777787799999999988766654 4 1 111111110 113345566666655 666
Q ss_pred EEEe
Q 023561 275 TISV 278 (280)
Q Consensus 275 ~v~~ 278 (280)
.|+.
T Consensus 80 iVfH 83 (293)
T PF02719_consen 80 IVFH 83 (293)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 481
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=85.20 E-value=3.2 Score=37.83 Aligned_cols=45 Identities=22% Similarity=0.169 Sum_probs=37.8
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhHH---HHHHHcC
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF---EIGKRFG 246 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~~---~~~~~~G 246 (280)
.+.+|+|.|+ |-+|...+..+..+|. +|.++.|++++. +.++++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~ 53 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLE 53 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcc
Confidence 6789999999 9999999999999999 899999987653 3466644
No 482
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=85.14 E-value=1.2 Score=36.88 Aligned_cols=32 Identities=28% Similarity=0.357 Sum_probs=23.6
Q ss_pred EEECccHHHHHHHHHHHHcCCCeEEEEcCChh
Q 023561 206 VIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (280)
Q Consensus 206 lI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (280)
+|+|+|+.|++++..++..|.+.++++++.++
T Consensus 1 ~IIGaG~aGl~~a~~l~~~g~~~v~v~e~~~~ 32 (203)
T PF13738_consen 1 VIIGAGPAGLAAAAHLLERGIDPVVVLERNDR 32 (203)
T ss_dssp EEE--SHHHHHHHHHHHHTT---EEEEESSSS
T ss_pred CEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 57899999999999999999955999998743
No 483
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=85.13 E-value=2.2 Score=38.03 Aligned_cols=69 Identities=19% Similarity=0.314 Sum_probs=48.8
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChh---HHHHHH------HcCCcEEEcCCCCCCccHHHHHHHhcCCCc
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---KFEIGK------RFGVTEFVNSKNCGDKSVSQVLLSIYDLPL 273 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~---~~~~~~------~~Ga~~vi~~~~~~~~~~~~~v~~~~~gg~ 273 (280)
.+|.|+|+|..|+++++.++..|. .|.+++.+.- |+.--+ .+|+.++ +.++ +-|.+.+..+...|+
T Consensus 2 ~siaIVGaGiAGl~aA~~L~~aG~-~vtV~eKg~GvGGRlAtRRl~~g~~DhGAqYf-k~~~---~~F~~~Ve~~~~~gl 76 (331)
T COG3380 2 PSIAIVGAGIAGLAAAYALREAGR-EVTVFEKGRGVGGRLATRRLDGGRFDHGAQYF-KPRD---ELFLRAVEALRDDGL 76 (331)
T ss_pred CcEEEEccchHHHHHHHHHHhcCc-EEEEEEcCCCcccchheeccCCccccccceee-cCCc---hHHHHHHHHHHhCCc
Confidence 358899999999999999999999 8999886542 222211 3555443 4554 788888887776665
Q ss_pred eEE
Q 023561 274 LTI 276 (280)
Q Consensus 274 ~~v 276 (280)
.++
T Consensus 77 V~~ 79 (331)
T COG3380 77 VDV 79 (331)
T ss_pred eee
Confidence 443
No 484
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=85.04 E-value=6.4 Score=33.40 Aligned_cols=51 Identities=25% Similarity=0.389 Sum_probs=39.0
Q ss_pred HHHHcCCCCCCEEEEECccHHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH
Q 023561 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR 244 (280)
Q Consensus 193 l~~~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~ 244 (280)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~ 119 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKK 119 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHH
Confidence 45677889999999998754 6677777777653 389999999877666653
No 485
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=85.03 E-value=2 Score=38.83 Aligned_cols=38 Identities=24% Similarity=0.321 Sum_probs=30.3
Q ss_pred CCCCEEEEECc---cHHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 023561 200 EVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKF 239 (280)
Q Consensus 200 ~~g~~VlI~G~---g~~G~~a~~la~~~g~~~vi~~~~~~~~~ 239 (280)
-.|+++||.|+ .++|.+.+..+...|+ +|+. .+...++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l 47 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL 47 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence 35899999998 8999999999999999 7776 4444443
No 486
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=84.97 E-value=2.6 Score=39.83 Aligned_cols=44 Identities=20% Similarity=0.334 Sum_probs=37.7
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-cCCc
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT 248 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~Ga~ 248 (280)
+|+|+|.|.+|...++.++..|. .|+++++++++.+.+++ .|..
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~ 46 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVR 46 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEE
Confidence 58899999999999999999998 78999999988888765 5543
No 487
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=84.96 E-value=2.6 Score=37.64 Aligned_cols=38 Identities=21% Similarity=0.331 Sum_probs=33.3
Q ss_pred CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 023561 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (280)
Q Consensus 203 ~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (280)
.+|.|+|+|.+|...++.+...|. .|+..+.++++++.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 479999999999988888888899 89999999987765
No 488
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=84.93 E-value=3.5 Score=37.84 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=36.3
Q ss_pred HcCCCCCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 196 ~~~~~~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
...--.+++|||+|+|-+|.+++..++..|+.+++++-++.++
T Consensus 168 ~~~~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~ 210 (338)
T PRK00676 168 RRQKSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLT 210 (338)
T ss_pred HhCCccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccc
Confidence 3344568999999999999999999999998789999888554
No 489
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=84.92 E-value=1.9 Score=39.14 Aligned_cols=34 Identities=35% Similarity=0.459 Sum_probs=31.4
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
.|++|.|+|-|.+|...++.++.+|+ +|++.++.
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm-~V~~~d~~ 177 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGA-KVVYYSTS 177 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCC-EEEEECCC
Confidence 57999999999999999999999999 89999874
No 490
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=84.87 E-value=8 Score=32.83 Aligned_cols=45 Identities=13% Similarity=0.181 Sum_probs=36.0
Q ss_pred EEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHcCCcEE
Q 023561 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEF 250 (280)
Q Consensus 205 VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~Ga~~v 250 (280)
|+|+|+ |.+|...++.+...+. .|.++.|+.. +.+.++..|+..+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv 48 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV 48 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe
Confidence 789998 9999999999888888 7888877753 4566677898644
No 491
>PRK07023 short chain dehydrogenase; Provisional
Probab=84.85 E-value=3.8 Score=34.95 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=28.7
Q ss_pred EEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 204 ~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
++||.|+ |++|...+..+...|+ +|++++++.++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~ 37 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHP 37 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcch
Confidence 6899998 9999999888888899 78888877554
No 492
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=84.83 E-value=2.6 Score=40.20 Aligned_cols=50 Identities=20% Similarity=0.284 Sum_probs=38.2
Q ss_pred CCCCCCEEEEECccHHHHH-HHHHHHHcCCCeEEEEcCChh-HHHHHHHcCCc
Q 023561 198 NVEVGSTVVIFGLGSIGLA-VAEGARLCGATRIIGVDVISE-KFEIGKRFGVT 248 (280)
Q Consensus 198 ~~~~g~~VlI~G~g~~G~~-a~~la~~~g~~~vi~~~~~~~-~~~~~~~~Ga~ 248 (280)
+...+++|+|+|.|..|.. ++.+++..|+ .|++.|.... ..+.+++.|..
T Consensus 3 ~~~~~~~v~viG~G~sG~s~~a~~L~~~G~-~V~~~D~~~~~~~~~l~~~gi~ 54 (461)
T PRK00421 3 ELRRIKRIHFVGIGGIGMSGLAEVLLNLGY-KVSGSDLKESAVTQRLLELGAI 54 (461)
T ss_pred CcCCCCEEEEEEEchhhHHHHHHHHHhCCC-eEEEECCCCChHHHHHHHCCCE
Confidence 4556788999999999999 6999999999 8999997543 23335555653
No 493
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=84.81 E-value=1.5 Score=42.10 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=30.6
Q ss_pred CCCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 201 ~g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
..++|+|+|+|+.|++++..++..|. .++++++++
T Consensus 9 ~~~~VaIIGAG~aGL~aA~~l~~~G~-~v~vfE~~~ 43 (461)
T PLN02172 9 NSQHVAVIGAGAAGLVAARELRREGH-TVVVFEREK 43 (461)
T ss_pred CCCCEEEECCcHHHHHHHHHHHhcCC-eEEEEecCC
Confidence 35789999999999999999999998 888888754
No 494
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=84.79 E-value=2.1 Score=38.21 Aligned_cols=37 Identities=16% Similarity=0.077 Sum_probs=30.6
Q ss_pred CCCEEEEECc-cHHHHHHHHHHHHcCCCeEEEEcCChhH
Q 023561 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238 (280)
Q Consensus 201 ~g~~VlI~G~-g~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (280)
.+++|||+|+ |.+|...+..+...|. .|+++.++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCc
Confidence 3578999998 9999999988888899 78877776543
No 495
>PRK08309 short chain dehydrogenase; Provisional
Probab=84.53 E-value=6.9 Score=32.34 Aligned_cols=39 Identities=15% Similarity=-0.025 Sum_probs=26.4
Q ss_pred EEEEECccHHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 023561 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (280)
Q Consensus 204 ~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (280)
+++|+|++++|...+..+...|+ +|+++.+++++.+.+.
T Consensus 2 ~vlVtGGtG~gg~la~~L~~~G~-~V~v~~R~~~~~~~l~ 40 (177)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEKGF-HVSVIARREVKLENVK 40 (177)
T ss_pred EEEEECcCHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHH
Confidence 58899984344445555556788 7888888877765544
No 496
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=84.45 E-value=7.7 Score=34.64 Aligned_cols=52 Identities=21% Similarity=0.246 Sum_probs=40.0
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHcCCcEEEcC
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~Ga~~vi~~ 253 (280)
.++|+..+.|..|.+.+..++..|.+-++++.. +++|++.++.+|++-+...
T Consensus 65 ~~~iv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~ 118 (304)
T cd01562 65 AKGVVAASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYG 118 (304)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 456666667999999999999999976666654 3568999999999755443
No 497
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=84.30 E-value=2.2 Score=36.08 Aligned_cols=34 Identities=38% Similarity=0.473 Sum_probs=30.9
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
..+|+|.|+|++|...++.+...|..+++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4789999999999999999999999889999987
No 498
>PLN00011 cysteine synthase
Probab=84.28 E-value=12 Score=34.02 Aligned_cols=61 Identities=20% Similarity=0.167 Sum_probs=44.8
Q ss_pred HHHHcCCCCC-CEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHHHHcCCcEEEcC
Q 023561 193 AWRTANVEVG-STVVIFGLGSIGLAVAEGARLCGATRIIGVDVI--SEKFEIGKRFGVTEFVNS 253 (280)
Q Consensus 193 l~~~~~~~~g-~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~--~~~~~~~~~~Ga~~vi~~ 253 (280)
+.+...+.+| ++|+.-..|..|++.+..++.+|.+-.+++... +.|+++++.+|++-++..
T Consensus 59 a~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 122 (323)
T PLN00011 59 AEDKGLITPGKSTLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTD 122 (323)
T ss_pred HHHcCCCCCCCcEEEEeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEEC
Confidence 3455567777 555543449999999999999999656666543 479999999999766543
No 499
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=84.27 E-value=2.3 Score=37.18 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=30.8
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCC
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~ 235 (280)
..+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999999999865
No 500
>PRK07236 hypothetical protein; Provisional
Probab=84.26 E-value=1.7 Score=40.27 Aligned_cols=34 Identities=24% Similarity=0.138 Sum_probs=29.5
Q ss_pred CCEEEEECccHHHHHHHHHHHHcCCCeEEEEcCCh
Q 023561 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (280)
Q Consensus 202 g~~VlI~G~g~~G~~a~~la~~~g~~~vi~~~~~~ 236 (280)
...|+|+|+|..|++++.++...|. .|+++++.+
T Consensus 6 ~~~ViIVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 39 (386)
T PRK07236 6 GPRAVVIGGSLGGLFAALLLRRAGW-DVDVFERSP 39 (386)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 4679999999999999999998999 788888754
Done!