Query 023562
Match_columns 280
No_of_seqs 301 out of 2129
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 08:57:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xtp_A LMAJ004091AAA; SGPP, st 99.9 3.5E-26 1.2E-30 197.3 13.8 189 66-272 12-200 (254)
2 2ex4_A Adrenal gland protein A 99.9 3.7E-23 1.3E-27 177.6 10.7 164 101-273 26-189 (241)
3 4gek_A TRNA (CMO5U34)-methyltr 99.8 8.1E-21 2.8E-25 165.6 14.0 112 155-273 68-182 (261)
4 3dtn_A Putative methyltransfer 99.8 1.4E-19 4.9E-24 154.1 12.6 110 155-273 42-152 (234)
5 1pjz_A Thiopurine S-methyltran 99.8 5.5E-20 1.9E-24 154.2 9.4 111 156-267 21-138 (203)
6 3hnr_A Probable methyltransfer 99.8 3E-19 1E-23 150.6 13.8 104 157-272 45-148 (220)
7 3h2b_A SAM-dependent methyltra 99.8 3.2E-19 1.1E-23 148.7 12.3 103 158-272 42-144 (203)
8 2o57_A Putative sarcosine dime 99.8 6.7E-19 2.3E-23 155.4 14.5 112 155-273 80-191 (297)
9 1kpg_A CFA synthase;, cyclopro 99.8 8.3E-19 2.8E-23 154.0 14.8 110 155-272 62-171 (287)
10 3ujc_A Phosphoethanolamine N-m 99.8 7E-19 2.4E-23 152.1 13.6 111 155-273 53-163 (266)
11 2gb4_A Thiopurine S-methyltran 99.8 4.2E-19 1.4E-23 154.0 11.4 112 156-268 67-190 (252)
12 3bus_A REBM, methyltransferase 99.8 1.4E-18 4.6E-23 151.4 14.6 112 155-273 59-170 (273)
13 3jwh_A HEN1; methyltransferase 99.8 9.3E-19 3.2E-23 147.6 12.8 115 156-271 28-143 (217)
14 4hg2_A Methyltransferase type 99.8 2.2E-19 7.5E-24 156.2 9.2 99 157-271 39-137 (257)
15 3hem_A Cyclopropane-fatty-acyl 99.8 1.9E-18 6.3E-23 153.2 14.4 110 155-272 70-186 (302)
16 3g5l_A Putative S-adenosylmeth 99.8 1.3E-18 4.6E-23 149.8 13.1 104 155-269 42-145 (253)
17 1vl5_A Unknown conserved prote 99.8 9.7E-19 3.3E-23 151.5 12.0 109 155-272 35-143 (260)
18 3ou2_A SAM-dependent methyltra 99.8 1.7E-18 5.7E-23 145.4 12.9 105 156-272 45-149 (218)
19 3jwg_A HEN1, methyltransferase 99.8 1.2E-18 4.2E-23 146.9 11.8 114 157-271 29-143 (219)
20 2fk8_A Methoxy mycolic acid sy 99.8 2.7E-18 9.3E-23 153.1 14.5 111 155-273 88-198 (318)
21 1nkv_A Hypothetical protein YJ 99.8 1.4E-18 4.7E-23 149.8 12.0 110 155-272 34-143 (256)
22 3l8d_A Methyltransferase; stru 99.8 7.8E-19 2.7E-23 150.0 10.2 103 157-271 53-155 (242)
23 3ofk_A Nodulation protein S; N 99.8 1.9E-18 6.5E-23 145.3 11.9 106 155-270 49-155 (216)
24 3f4k_A Putative methyltransfer 99.8 2.9E-18 1E-22 147.8 12.9 109 155-271 44-152 (257)
25 2pxx_A Uncharacterized protein 99.8 5.8E-18 2E-22 141.6 14.2 117 142-271 32-161 (215)
26 3dlc_A Putative S-adenosyl-L-m 99.8 1.2E-18 4.3E-23 146.0 10.1 107 159-272 45-151 (219)
27 3e23_A Uncharacterized protein 99.8 3.1E-18 1E-22 143.6 11.8 102 156-271 42-143 (211)
28 3mgg_A Methyltransferase; NYSG 99.8 2.3E-18 7.7E-23 150.3 11.2 120 140-270 23-143 (276)
29 2p7i_A Hypothetical protein; p 99.8 2.8E-18 9.7E-23 146.5 11.3 101 157-271 42-143 (250)
30 2xvm_A Tellurite resistance pr 99.8 4.5E-18 1.5E-22 140.7 12.0 110 156-273 31-140 (199)
31 3kkz_A Uncharacterized protein 99.8 6.4E-18 2.2E-22 146.9 12.8 109 155-271 44-152 (267)
32 3lcc_A Putative methyl chlorid 99.8 5.3E-18 1.8E-22 144.6 11.7 109 157-272 66-174 (235)
33 4htf_A S-adenosylmethionine-de 99.7 2.1E-18 7.2E-23 151.4 9.2 106 157-270 68-174 (285)
34 1xxl_A YCGJ protein; structura 99.7 3.6E-18 1.2E-22 146.3 10.4 109 155-272 19-127 (239)
35 3dh0_A SAM dependent methyltra 99.7 1.2E-17 4E-22 140.7 13.3 111 155-273 35-147 (219)
36 2p8j_A S-adenosylmethionine-de 99.7 6.3E-18 2.1E-22 141.2 10.8 110 156-272 22-131 (209)
37 1ve3_A Hypothetical protein PH 99.7 1.5E-17 5.2E-22 140.5 13.2 107 157-271 38-144 (227)
38 3ggd_A SAM-dependent methyltra 99.7 7.5E-18 2.6E-22 144.5 11.4 108 155-272 54-166 (245)
39 3pfg_A N-methyltransferase; N, 99.7 1.3E-17 4.6E-22 144.5 13.1 105 157-274 50-156 (263)
40 3bkw_A MLL3908 protein, S-aden 99.7 6.8E-18 2.3E-22 144.1 10.9 104 156-270 42-145 (243)
41 2gs9_A Hypothetical protein TT 99.7 1.2E-17 4.1E-22 139.9 11.9 99 157-271 36-134 (211)
42 3vc1_A Geranyl diphosphate 2-C 99.7 1.3E-17 4.3E-22 148.6 12.6 112 155-274 115-226 (312)
43 3orh_A Guanidinoacetate N-meth 99.7 2E-18 7E-23 148.0 7.0 105 156-269 59-170 (236)
44 3gu3_A Methyltransferase; alph 99.7 1.5E-17 5.2E-22 146.1 12.8 107 155-271 20-128 (284)
45 3m70_A Tellurite resistance pr 99.7 1E-17 3.5E-22 147.1 11.6 108 157-273 120-227 (286)
46 1zx0_A Guanidinoacetate N-meth 99.7 4.8E-18 1.7E-22 145.2 7.9 108 156-270 59-171 (236)
47 2yqz_A Hypothetical protein TT 99.7 8.7E-18 3E-22 145.1 9.6 104 155-268 37-140 (263)
48 3iv6_A Putative Zn-dependent a 99.7 7.5E-18 2.6E-22 146.5 9.1 108 155-271 43-150 (261)
49 1ri5_A MRNA capping enzyme; me 99.7 1.8E-17 6E-22 145.7 11.3 110 156-270 63-175 (298)
50 3dli_A Methyltransferase; PSI- 99.7 1.5E-17 5E-22 142.4 10.1 101 156-271 40-142 (240)
51 3thr_A Glycine N-methyltransfe 99.7 5.8E-18 2E-22 149.0 7.3 122 139-270 46-176 (293)
52 3sm3_A SAM-dependent methyltra 99.7 6.4E-17 2.2E-21 137.0 12.7 114 157-272 30-144 (235)
53 3g2m_A PCZA361.24; SAM-depende 99.7 3.9E-17 1.3E-21 144.4 11.7 109 158-271 83-192 (299)
54 3g5t_A Trans-aconitate 3-methy 99.7 4.5E-17 1.5E-21 144.0 11.7 105 156-268 35-148 (299)
55 1wzn_A SAM-dependent methyltra 99.7 1.8E-17 6E-22 142.6 8.8 117 140-269 28-145 (252)
56 2a14_A Indolethylamine N-methy 99.7 7.5E-18 2.6E-22 146.7 6.3 133 139-272 38-200 (263)
57 2p35_A Trans-aconitate 2-methy 99.7 9.5E-17 3.2E-21 138.4 13.2 102 155-270 31-133 (259)
58 2kw5_A SLR1183 protein; struct 99.7 7.2E-17 2.5E-21 134.2 11.8 105 157-272 30-134 (202)
59 1y8c_A S-adenosylmethionine-de 99.7 2.5E-17 8.6E-22 140.5 8.8 115 140-268 25-141 (246)
60 2vdw_A Vaccinia virus capping 99.7 1.7E-17 5.8E-22 147.5 8.0 114 157-270 48-170 (302)
61 3mti_A RRNA methylase; SAM-dep 99.7 6.4E-17 2.2E-21 132.8 10.7 122 139-272 9-138 (185)
62 4fsd_A Arsenic methyltransfera 99.7 2E-17 6.9E-22 151.6 8.3 115 156-272 82-206 (383)
63 3ege_A Putative methyltransfer 99.7 2.5E-17 8.7E-22 142.9 8.4 101 155-271 32-132 (261)
64 3g07_A 7SK snRNA methylphospha 99.7 5.2E-17 1.8E-21 143.5 10.5 113 157-269 46-220 (292)
65 3bxo_A N,N-dimethyltransferase 99.7 2.4E-16 8.2E-21 134.1 14.3 105 157-274 40-146 (239)
66 3cgg_A SAM-dependent methyltra 99.7 1.5E-16 5E-21 130.7 12.0 102 157-270 46-148 (195)
67 3ccf_A Cyclopropane-fatty-acyl 99.7 1.1E-16 3.9E-21 140.0 11.7 102 155-271 55-156 (279)
68 3i9f_A Putative type 11 methyl 99.7 5.3E-17 1.8E-21 131.4 8.9 102 155-273 15-116 (170)
69 3dp7_A SAM-dependent methyltra 99.7 2.1E-16 7E-21 143.9 13.7 111 157-274 179-292 (363)
70 3ocj_A Putative exported prote 99.7 9.8E-17 3.4E-21 142.4 10.5 112 155-272 116-230 (305)
71 2qe6_A Uncharacterized protein 99.7 2.9E-16 1E-20 137.6 12.9 107 158-272 78-199 (274)
72 3d2l_A SAM-dependent methyltra 99.7 2E-16 6.7E-21 135.0 10.7 102 157-268 33-136 (243)
73 2aot_A HMT, histamine N-methyl 99.7 1E-16 3.5E-21 141.4 8.9 110 156-271 51-174 (292)
74 3i53_A O-methyltransferase; CO 99.7 5.5E-16 1.9E-20 139.1 13.3 112 155-274 167-279 (332)
75 2i62_A Nicotinamide N-methyltr 99.7 8E-17 2.7E-21 139.2 6.8 116 156-271 55-200 (265)
76 2g72_A Phenylethanolamine N-me 99.6 1.6E-16 5.3E-21 139.9 7.3 115 157-271 71-217 (289)
77 3p9n_A Possible methyltransfer 99.6 2.5E-16 8.5E-21 130.0 8.1 109 156-271 43-155 (189)
78 3gwz_A MMCR; methyltransferase 99.6 1.6E-15 5.3E-20 138.3 14.1 112 155-274 200-312 (369)
79 2r3s_A Uncharacterized protein 99.6 6.3E-16 2.2E-20 138.5 11.3 112 156-274 164-276 (335)
80 3mcz_A O-methyltransferase; ad 99.6 5.4E-16 1.9E-20 140.1 10.9 110 158-274 180-292 (352)
81 2pjd_A Ribosomal RNA small sub 99.6 2.5E-16 8.5E-21 142.3 8.5 214 35-271 76-305 (343)
82 2avn_A Ubiquinone/menaquinone 99.6 7.4E-16 2.5E-20 133.5 11.1 100 157-270 54-153 (260)
83 3e05_A Precorrin-6Y C5,15-meth 99.6 1.8E-15 6.2E-20 126.2 12.9 105 155-270 38-143 (204)
84 3bkx_A SAM-dependent methyltra 99.6 6.6E-16 2.3E-20 134.4 10.5 111 155-272 41-162 (275)
85 3eey_A Putative rRNA methylase 99.6 1.5E-15 5.2E-20 125.7 11.9 112 155-271 20-141 (197)
86 3bgv_A MRNA CAP guanine-N7 met 99.6 5.2E-16 1.8E-20 138.1 9.5 114 157-270 34-156 (313)
87 1x19_A CRTF-related protein; m 99.6 2.4E-15 8E-20 136.5 13.8 111 155-273 188-299 (359)
88 3r0q_C Probable protein argini 99.6 5.6E-16 1.9E-20 141.7 9.6 109 155-270 61-170 (376)
89 3e8s_A Putative SAM dependent 99.6 2E-16 6.9E-21 133.1 6.0 99 157-271 52-154 (227)
90 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.2E-15 4E-20 124.0 10.3 105 155-271 23-129 (178)
91 2fyt_A Protein arginine N-meth 99.6 1.6E-15 5.4E-20 136.9 12.0 104 155-266 62-168 (340)
92 1qzz_A RDMB, aclacinomycin-10- 99.6 2.1E-15 7.3E-20 137.2 12.8 110 155-272 180-292 (374)
93 2ift_A Putative methylase HI07 99.6 4.5E-16 1.5E-20 130.1 7.3 108 157-272 53-166 (201)
94 3dmg_A Probable ribosomal RNA 99.6 1.1E-15 3.8E-20 139.9 10.5 222 37-271 103-342 (381)
95 3htx_A HEN1; HEN1, small RNA m 99.6 1.9E-15 6.6E-20 147.5 12.7 112 157-269 721-834 (950)
96 3uwp_A Histone-lysine N-methyl 99.6 1.8E-15 6E-20 138.2 11.5 115 155-276 171-295 (438)
97 1dus_A MJ0882; hypothetical pr 99.6 3.5E-15 1.2E-19 122.3 11.8 109 155-271 50-159 (194)
98 3cc8_A Putative methyltransfer 99.6 1.7E-15 5.7E-20 127.7 10.0 99 157-271 32-132 (230)
99 1af7_A Chemotaxis receptor met 99.6 1.9E-15 6.7E-20 132.2 10.7 116 157-272 105-257 (274)
100 3njr_A Precorrin-6Y methylase; 99.6 3.1E-15 1.1E-19 125.3 11.3 103 155-270 53-155 (204)
101 3lbf_A Protein-L-isoaspartate 99.6 2.2E-15 7.5E-20 126.0 10.4 102 155-271 75-176 (210)
102 3m33_A Uncharacterized protein 99.6 5.3E-16 1.8E-20 131.7 6.6 90 157-266 48-139 (226)
103 2ip2_A Probable phenazine-spec 99.6 2.1E-15 7.3E-20 135.3 10.7 108 159-274 169-277 (334)
104 2y1w_A Histone-arginine methyl 99.6 2E-15 6.9E-20 136.6 10.5 106 156-268 49-154 (348)
105 1nt2_A Fibrillarin-like PRE-rR 99.6 4.9E-15 1.7E-19 124.8 12.2 101 155-268 55-160 (210)
106 1tw3_A COMT, carminomycin 4-O- 99.6 4E-15 1.4E-19 134.8 12.3 109 155-271 181-290 (360)
107 3dxy_A TRNA (guanine-N(7)-)-me 99.6 7.9E-16 2.7E-20 130.4 7.1 108 157-270 34-151 (218)
108 3q7e_A Protein arginine N-meth 99.6 1.8E-15 6.2E-20 137.0 9.9 107 156-268 65-172 (349)
109 3fpf_A Mtnas, putative unchara 99.6 1.8E-15 6.3E-20 133.1 9.5 103 155-270 120-223 (298)
110 1yzh_A TRNA (guanine-N(7)-)-me 99.6 3.3E-15 1.1E-19 125.6 10.5 107 157-269 41-156 (214)
111 3grz_A L11 mtase, ribosomal pr 99.6 1.6E-15 5.5E-20 126.5 8.3 102 157-271 60-161 (205)
112 2ozv_A Hypothetical protein AT 99.6 7.1E-15 2.4E-19 127.7 12.3 109 155-268 34-169 (260)
113 3evz_A Methyltransferase; NYSG 99.6 4.6E-15 1.6E-19 125.8 10.7 106 156-268 54-178 (230)
114 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.3E-15 7.9E-20 126.9 8.7 107 157-269 38-153 (213)
115 3fzg_A 16S rRNA methylase; met 99.6 7.4E-16 2.5E-20 126.7 5.3 104 156-269 48-152 (200)
116 3lpm_A Putative methyltransfer 99.6 2.1E-15 7.3E-20 130.7 8.2 110 155-269 46-176 (259)
117 4df3_A Fibrillarin-like rRNA/T 99.6 1.4E-14 4.7E-19 123.6 13.1 116 142-269 62-182 (233)
118 4dcm_A Ribosomal RNA large sub 99.6 5.8E-15 2E-19 134.9 11.5 216 36-271 101-336 (375)
119 4e2x_A TCAB9; kijanose, tetron 99.6 3.6E-16 1.2E-20 144.5 3.4 105 155-270 105-209 (416)
120 1vlm_A SAM-dependent methyltra 99.6 2.7E-15 9.2E-20 126.6 8.4 94 158-271 48-141 (219)
121 1xdz_A Methyltransferase GIDB; 99.6 2E-15 6.7E-20 129.4 7.2 102 156-269 69-174 (240)
122 3lst_A CALO1 methyltransferase 99.6 9.2E-15 3.1E-19 132.1 11.8 109 155-274 182-291 (348)
123 1vbf_A 231AA long hypothetical 99.6 1.1E-14 3.8E-19 123.5 11.5 100 155-271 68-167 (231)
124 2esr_A Methyltransferase; stru 99.6 2.7E-15 9.2E-20 122.1 7.3 107 157-271 31-140 (177)
125 2fpo_A Methylase YHHF; structu 99.6 3.2E-15 1.1E-19 125.0 7.7 106 157-271 54-162 (202)
126 2zfu_A Nucleomethylin, cerebra 99.6 2.8E-15 9.7E-20 125.8 7.1 89 156-272 66-154 (215)
127 3gdh_A Trimethylguanosine synt 99.6 4E-17 1.4E-21 139.7 -4.7 102 157-267 78-179 (241)
128 2fhp_A Methylase, putative; al 99.6 4.1E-15 1.4E-19 121.7 7.0 107 157-271 44-156 (187)
129 2frn_A Hypothetical protein PH 99.6 5.7E-15 2E-19 129.6 8.4 103 157-271 125-227 (278)
130 1g6q_1 HnRNP arginine N-methyl 99.6 1E-14 3.4E-19 131.0 10.1 105 157-267 38-143 (328)
131 1fbn_A MJ fibrillarin homologu 99.6 3.1E-14 1.1E-18 121.1 12.5 100 155-268 72-177 (230)
132 3b3j_A Histone-arginine methyl 99.6 7.3E-15 2.5E-19 138.3 9.4 105 156-267 157-261 (480)
133 1o9g_A RRNA methyltransferase; 99.6 8E-15 2.8E-19 126.3 8.8 111 157-272 51-217 (250)
134 3g89_A Ribosomal RNA small sub 99.5 1.3E-14 4.5E-19 125.3 9.9 103 156-270 79-185 (249)
135 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.1E-14 3.6E-19 124.9 8.8 113 156-268 45-167 (235)
136 4azs_A Methyltransferase WBDD; 99.5 2.1E-15 7.3E-20 144.9 4.8 109 156-271 65-175 (569)
137 3ntv_A MW1564 protein; rossman 99.5 8.6E-15 3E-19 124.9 8.1 103 157-269 71-176 (232)
138 2yxe_A Protein-L-isoaspartate 99.5 2.1E-14 7E-19 120.5 10.2 102 155-270 75-178 (215)
139 1dl5_A Protein-L-isoaspartate 99.5 1.8E-14 6.3E-19 128.6 10.5 102 155-270 73-176 (317)
140 1l3i_A Precorrin-6Y methyltran 99.5 8E-15 2.7E-19 120.0 7.5 105 155-270 31-135 (192)
141 3reo_A (ISO)eugenol O-methyltr 99.5 1.7E-14 5.8E-19 131.5 10.2 103 156-274 202-305 (368)
142 3dr5_A Putative O-methyltransf 99.5 1.2E-14 3.9E-19 123.5 8.4 104 158-271 57-165 (221)
143 1jsx_A Glucose-inhibited divis 99.5 2.4E-14 8.2E-19 119.3 10.1 101 157-270 65-166 (207)
144 3u81_A Catechol O-methyltransf 99.5 7.3E-15 2.5E-19 124.2 6.8 107 157-271 58-172 (221)
145 4a6d_A Hydroxyindole O-methylt 99.5 9.6E-14 3.3E-18 125.8 14.6 110 155-273 177-287 (353)
146 3mq2_A 16S rRNA methyltransfer 99.5 9.4E-15 3.2E-19 123.0 7.3 106 155-269 25-140 (218)
147 3p9c_A Caffeic acid O-methyltr 99.5 2.2E-14 7.5E-19 130.6 10.2 103 156-274 200-303 (364)
148 4hc4_A Protein arginine N-meth 99.5 2.4E-14 8.2E-19 130.4 9.8 104 157-267 83-187 (376)
149 1fp1_D Isoliquiritigenin 2'-O- 99.5 1.8E-14 6.1E-19 131.4 8.7 102 156-273 208-310 (372)
150 3p2e_A 16S rRNA methylase; met 99.5 1.6E-14 5.3E-19 123.0 7.5 107 156-268 23-138 (225)
151 3tfw_A Putative O-methyltransf 99.5 2.8E-14 9.5E-19 123.0 9.1 105 157-271 63-172 (248)
152 3bzb_A Uncharacterized protein 99.5 7.1E-14 2.4E-18 122.7 11.6 110 156-268 78-204 (281)
153 2ipx_A RRNA 2'-O-methyltransfe 99.5 7.4E-14 2.5E-18 118.9 11.4 102 155-268 75-181 (233)
154 1u2z_A Histone-lysine N-methyl 99.5 6.4E-14 2.2E-18 129.7 11.4 114 155-275 240-365 (433)
155 1ws6_A Methyltransferase; stru 99.5 7.6E-15 2.6E-19 118.3 4.2 103 157-271 41-149 (171)
156 1fp2_A Isoflavone O-methyltran 99.5 3E-14 1E-18 128.8 8.6 102 156-273 187-292 (352)
157 2yxd_A Probable cobalt-precorr 99.5 3.7E-14 1.3E-18 115.2 8.3 100 155-270 33-132 (183)
158 1g8a_A Fibrillarin-like PRE-rR 99.5 2.2E-13 7.5E-18 115.3 13.2 102 155-268 71-177 (227)
159 3q87_B N6 adenine specific DNA 99.5 3.1E-14 1.1E-18 115.7 7.6 96 157-271 23-125 (170)
160 2gpy_A O-methyltransferase; st 99.5 4E-14 1.4E-18 120.4 8.3 104 157-270 54-161 (233)
161 4dzr_A Protein-(glutamine-N5) 99.5 3.8E-15 1.3E-19 124.2 1.9 105 156-268 29-163 (215)
162 3giw_A Protein of unknown func 99.5 4.8E-14 1.6E-18 122.7 8.6 125 139-272 63-203 (277)
163 3tr6_A O-methyltransferase; ce 99.5 2.2E-14 7.5E-19 121.2 6.1 105 157-271 64-176 (225)
164 3r3h_A O-methyltransferase, SA 99.5 9E-15 3.1E-19 125.8 3.5 105 157-271 60-172 (242)
165 2vdv_E TRNA (guanine-N(7)-)-me 99.5 9.8E-14 3.3E-18 119.3 10.0 113 156-268 48-172 (246)
166 3duw_A OMT, O-methyltransferas 99.5 4.2E-14 1.4E-18 119.4 7.5 105 157-271 58-169 (223)
167 3c3p_A Methyltransferase; NP_9 99.5 4.2E-14 1.4E-18 118.4 7.4 103 157-270 56-161 (210)
168 1yb2_A Hypothetical protein TA 99.5 8.7E-14 3E-18 121.6 9.7 103 155-271 108-213 (275)
169 3mb5_A SAM-dependent methyltra 99.5 8.4E-14 2.9E-18 119.9 9.3 104 155-271 91-196 (255)
170 1jg1_A PIMT;, protein-L-isoasp 99.5 1.3E-13 4.3E-18 117.6 10.3 101 155-270 89-190 (235)
171 2nxc_A L11 mtase, ribosomal pr 99.5 4.5E-14 1.6E-18 122.2 7.5 101 157-271 120-220 (254)
172 1p91_A Ribosomal RNA large sub 99.5 5.7E-14 1.9E-18 121.9 8.0 96 156-271 84-180 (269)
173 2b3t_A Protein methyltransfera 99.5 1.1E-13 3.7E-18 121.0 9.5 106 157-269 109-238 (276)
174 3id6_C Fibrillarin-like rRNA/T 99.5 3.4E-13 1.2E-17 115.1 12.1 105 153-269 72-181 (232)
175 3adn_A Spermidine synthase; am 99.5 1.1E-13 3.9E-18 122.3 9.0 112 156-268 82-197 (294)
176 2ld4_A Anamorsin; methyltransf 99.5 2.4E-14 8.4E-19 116.5 4.1 90 155-271 10-103 (176)
177 1ej0_A FTSJ; methyltransferase 99.5 1.1E-13 3.6E-18 111.5 7.6 100 156-272 21-139 (180)
178 3a27_A TYW2, uncharacterized p 99.5 8.5E-14 2.9E-18 121.7 7.5 105 155-272 117-222 (272)
179 2pwy_A TRNA (adenine-N(1)-)-me 99.5 2.1E-13 7.3E-18 117.2 9.9 104 155-271 94-200 (258)
180 3sso_A Methyltransferase; macr 99.4 4.1E-14 1.4E-18 128.8 5.1 111 139-272 203-327 (419)
181 1sui_A Caffeoyl-COA O-methyltr 99.4 8.1E-14 2.8E-18 120.1 6.7 104 157-270 79-191 (247)
182 2hnk_A SAM-dependent O-methylt 99.4 7.8E-14 2.7E-18 119.3 6.5 105 157-271 60-183 (239)
183 3gjy_A Spermidine synthase; AP 99.4 1.9E-13 6.5E-18 121.6 9.2 106 158-269 90-200 (317)
184 2oxt_A Nucleoside-2'-O-methylt 99.4 3.9E-14 1.3E-18 123.4 4.5 107 155-271 72-187 (265)
185 3bwc_A Spermidine synthase; SA 99.4 9E-14 3.1E-18 123.5 6.8 112 156-269 94-210 (304)
186 2pbf_A Protein-L-isoaspartate 99.4 1.5E-13 5.2E-18 116.2 7.8 107 155-270 78-194 (227)
187 2igt_A SAM dependent methyltra 99.4 1.2E-13 4.1E-18 124.1 7.5 110 157-272 153-275 (332)
188 3hp7_A Hemolysin, putative; st 99.4 1E-13 3.5E-18 121.9 6.5 97 157-268 85-184 (291)
189 3tma_A Methyltransferase; thum 99.4 5E-13 1.7E-17 121.0 11.1 110 155-270 201-318 (354)
190 2yvl_A TRMI protein, hypotheti 99.4 6E-13 2.1E-17 113.7 11.0 104 155-271 89-192 (248)
191 1i1n_A Protein-L-isoaspartate 99.4 2.8E-13 9.5E-18 114.5 8.7 107 155-270 75-183 (226)
192 1zg3_A Isoflavanone 4'-O-methy 99.4 1.9E-13 6.6E-18 123.8 8.2 101 157-273 193-297 (358)
193 3c3y_A Pfomt, O-methyltransfer 99.4 2.4E-13 8.2E-18 116.4 8.1 103 157-269 70-181 (237)
194 1ne2_A Hypothetical protein TA 99.4 5.4E-13 1.9E-17 110.7 9.8 96 156-267 50-145 (200)
195 3opn_A Putative hemolysin; str 99.4 6.3E-14 2.2E-18 119.8 4.2 99 157-268 37-136 (232)
196 1i9g_A Hypothetical protein RV 99.4 3.8E-13 1.3E-17 117.4 9.2 105 155-271 97-205 (280)
197 3cbg_A O-methyltransferase; cy 99.4 2.4E-13 8.2E-18 115.9 7.7 105 157-271 72-184 (232)
198 1r18_A Protein-L-isoaspartate( 99.4 1.3E-13 4.4E-18 116.9 5.9 107 155-270 82-195 (227)
199 1o54_A SAM-dependent O-methylt 99.4 4.4E-13 1.5E-17 117.1 9.3 104 155-271 110-215 (277)
200 3lec_A NADB-rossmann superfami 99.4 4.6E-13 1.6E-17 113.9 8.8 107 156-271 20-127 (230)
201 1ixk_A Methyltransferase; open 99.4 5.3E-13 1.8E-17 119.1 9.4 109 155-269 116-246 (315)
202 2avd_A Catechol-O-methyltransf 99.4 2.1E-13 7.2E-18 115.4 5.8 105 157-271 69-181 (229)
203 2wa2_A Non-structural protein 99.4 2E-13 6.7E-18 119.7 5.7 107 155-271 80-195 (276)
204 2plw_A Ribosomal RNA methyltra 99.4 9.3E-13 3.2E-17 109.1 9.4 98 156-270 21-155 (201)
205 3kr9_A SAM-dependent methyltra 99.4 7E-13 2.4E-17 112.5 8.8 105 156-270 14-120 (225)
206 3gnl_A Uncharacterized protein 99.4 6.8E-13 2.3E-17 113.7 8.7 107 156-271 20-127 (244)
207 1nv8_A HEMK protein; class I a 99.4 8.2E-13 2.8E-17 116.2 9.4 105 157-268 123-248 (284)
208 1mjf_A Spermidine synthase; sp 99.4 2E-13 6.8E-18 119.9 5.4 111 157-268 75-192 (281)
209 2bm8_A Cephalosporin hydroxyla 99.4 2.3E-13 8E-18 116.5 5.7 97 157-269 81-187 (236)
210 1xj5_A Spermidine synthase 1; 99.4 4.1E-13 1.4E-17 120.7 7.4 109 156-268 119-234 (334)
211 2h00_A Methyltransferase 10 do 99.4 5.2E-14 1.8E-18 121.3 1.3 107 157-268 65-191 (254)
212 1wy7_A Hypothetical protein PH 99.4 2E-12 6.8E-17 107.7 10.7 100 156-267 48-147 (207)
213 1iy9_A Spermidine synthase; ro 99.4 3.9E-13 1.3E-17 117.7 6.6 108 157-268 75-188 (275)
214 3k6r_A Putative transferase PH 99.4 5.2E-13 1.8E-17 116.9 7.3 105 156-272 124-228 (278)
215 2b78_A Hypothetical protein SM 99.4 2.3E-13 8E-18 124.7 4.8 111 157-272 212-334 (385)
216 2o07_A Spermidine synthase; st 99.4 3.4E-13 1.2E-17 119.8 5.5 110 156-269 94-209 (304)
217 2i7c_A Spermidine synthase; tr 99.4 4.3E-13 1.5E-17 117.9 6.0 111 156-268 77-191 (283)
218 1uir_A Polyamine aminopropyltr 99.4 4.2E-13 1.4E-17 119.7 5.8 111 157-268 77-194 (314)
219 2b25_A Hypothetical protein; s 99.4 1.4E-12 4.7E-17 117.2 9.1 109 155-270 103-220 (336)
220 2as0_A Hypothetical protein PH 99.4 5.1E-13 1.7E-17 122.8 6.5 110 157-271 217-337 (396)
221 3lcv_B Sisomicin-gentamicin re 99.4 4.9E-13 1.7E-17 114.8 5.6 121 135-270 116-237 (281)
222 2pt6_A Spermidine synthase; tr 99.4 7E-13 2.4E-17 118.6 6.5 109 157-268 116-229 (321)
223 2b2c_A Spermidine synthase; be 99.3 5.2E-13 1.8E-17 119.1 5.5 110 157-269 108-222 (314)
224 2cmg_A Spermidine synthase; tr 99.3 1.2E-12 4E-17 113.9 7.2 99 157-268 72-170 (262)
225 2qm3_A Predicted methyltransfe 99.3 2.6E-12 8.8E-17 117.2 9.7 99 157-265 172-273 (373)
226 3ajd_A Putative methyltransfer 99.3 9.9E-13 3.4E-17 115.0 6.5 109 155-269 81-211 (274)
227 3frh_A 16S rRNA methylase; met 99.3 2.6E-12 8.8E-17 109.3 8.2 103 156-269 104-206 (253)
228 3v97_A Ribosomal RNA large sub 99.3 9.1E-13 3.1E-17 129.3 6.3 109 157-271 539-659 (703)
229 3c0k_A UPF0064 protein YCCW; P 99.3 1.2E-12 3.9E-17 120.4 6.5 110 157-272 220-342 (396)
230 1inl_A Spermidine synthase; be 99.3 1.3E-12 4.3E-17 115.6 6.2 108 157-268 90-204 (296)
231 2yxl_A PH0851 protein, 450AA l 99.3 1.2E-11 4.1E-16 115.5 12.7 110 155-270 257-390 (450)
232 1wxx_A TT1595, hypothetical pr 99.3 1.3E-12 4.3E-17 119.6 5.5 108 157-271 209-327 (382)
233 1zq9_A Probable dimethyladenos 99.3 4.1E-12 1.4E-16 111.8 8.1 103 155-266 26-144 (285)
234 3tm4_A TRNA (guanine N2-)-meth 99.3 7.4E-12 2.5E-16 114.2 9.1 106 157-268 217-329 (373)
235 2nyu_A Putative ribosomal RNA 99.3 2.7E-12 9.1E-17 105.8 5.5 99 156-271 21-147 (196)
236 4dmg_A Putative uncharacterize 99.3 3.8E-12 1.3E-16 116.8 7.0 107 157-271 214-328 (393)
237 2yx1_A Hypothetical protein MJ 99.3 5.1E-12 1.8E-16 113.7 7.4 100 157-272 195-294 (336)
238 2f8l_A Hypothetical protein LM 99.3 8.4E-12 2.9E-16 112.5 8.6 106 156-269 129-256 (344)
239 1sqg_A SUN protein, FMU protei 99.3 1.7E-11 5.7E-16 113.8 10.1 108 155-269 244-374 (429)
240 3dou_A Ribosomal RNA large sub 99.3 5.9E-12 2E-16 104.3 6.1 97 156-270 24-140 (191)
241 2frx_A Hypothetical protein YE 99.3 2E-11 6.7E-16 114.8 10.4 107 157-269 117-246 (479)
242 2p41_A Type II methyltransfera 99.2 3.3E-12 1.1E-16 113.5 3.5 104 155-270 80-192 (305)
243 3m6w_A RRNA methylase; rRNA me 99.2 9.5E-12 3.2E-16 116.2 6.7 108 155-269 99-229 (464)
244 2jjq_A Uncharacterized RNA met 99.2 8.1E-11 2.8E-15 109.0 10.1 99 157-270 290-388 (425)
245 3m4x_A NOL1/NOP2/SUN family pr 99.1 3.5E-11 1.2E-15 112.2 6.1 109 155-269 103-234 (456)
246 1uwv_A 23S rRNA (uracil-5-)-me 99.1 1.3E-10 4.4E-15 108.0 9.1 103 155-270 284-390 (433)
247 2h1r_A Dimethyladenosine trans 99.1 9.1E-11 3.1E-15 103.8 7.5 99 155-263 40-153 (299)
248 1qam_A ERMC' methyltransferase 99.1 3.7E-10 1.3E-14 97.0 10.9 73 155-237 28-101 (244)
249 2qfm_A Spermine synthase; sper 99.1 1E-10 3.4E-15 105.4 7.0 113 156-268 187-313 (364)
250 3ldu_A Putative methylase; str 99.1 2E-10 7E-15 105.1 9.1 108 155-268 193-343 (385)
251 3k0b_A Predicted N6-adenine-sp 99.1 2.7E-10 9.1E-15 104.5 9.5 108 155-268 199-349 (393)
252 3ldg_A Putative uncharacterize 99.1 6.7E-10 2.3E-14 101.5 12.0 108 155-268 192-342 (384)
253 2okc_A Type I restriction enzy 99.1 2.3E-10 8E-15 106.6 9.0 110 155-269 169-307 (445)
254 1yub_A Ermam, rRNA methyltrans 99.1 6.6E-12 2.2E-16 107.9 -1.6 103 155-268 27-144 (245)
255 2ih2_A Modification methylase 99.1 1.9E-10 6.4E-15 106.0 7.7 97 157-269 39-164 (421)
256 3gru_A Dimethyladenosine trans 99.0 5.1E-10 1.7E-14 98.7 8.8 77 155-240 48-124 (295)
257 2xyq_A Putative 2'-O-methyl tr 99.0 1.4E-09 4.7E-14 95.7 8.8 95 155-271 61-173 (290)
258 3fut_A Dimethyladenosine trans 99.0 2.3E-09 7.8E-14 93.4 10.0 88 155-254 45-133 (271)
259 2b9e_A NOL1/NOP2/SUN domain fa 98.9 4.2E-09 1.4E-13 93.5 10.7 107 155-268 100-233 (309)
260 3tqs_A Ribosomal RNA small sub 98.9 2E-09 6.7E-14 93.1 8.2 75 155-239 27-105 (255)
261 3axs_A Probable N(2),N(2)-dime 98.9 5.5E-10 1.9E-14 102.2 4.9 102 157-269 52-158 (392)
262 2dul_A N(2),N(2)-dimethylguano 98.9 5.2E-10 1.8E-14 102.1 4.5 100 157-268 47-163 (378)
263 3bt7_A TRNA (uracil-5-)-methyl 98.9 3.5E-10 1.2E-14 102.9 3.4 97 158-269 214-326 (369)
264 2r6z_A UPF0341 protein in RSP 98.9 7.1E-10 2.4E-14 96.0 3.3 108 156-271 82-218 (258)
265 3evf_A RNA-directed RNA polyme 98.8 1.5E-09 5.2E-14 93.6 4.5 105 155-268 72-183 (277)
266 4gqb_A Protein arginine N-meth 98.8 6E-09 2.1E-13 100.3 8.9 103 157-266 357-464 (637)
267 3o4f_A Spermidine synthase; am 98.8 2.7E-08 9.3E-13 87.2 10.8 113 155-268 81-197 (294)
268 3ftd_A Dimethyladenosine trans 98.8 8.3E-09 2.8E-13 88.8 7.0 74 155-239 29-104 (249)
269 3v97_A Ribosomal RNA large sub 98.8 2.9E-08 9.8E-13 97.4 10.8 109 155-268 188-346 (703)
270 1m6y_A S-adenosyl-methyltransf 98.7 6.4E-09 2.2E-13 92.0 5.3 76 155-237 24-105 (301)
271 2ar0_A M.ecoki, type I restric 98.7 2.4E-08 8.2E-13 95.2 8.7 114 155-269 167-312 (541)
272 1qyr_A KSGA, high level kasuga 98.7 1.2E-08 4E-13 88.0 5.5 74 155-239 19-99 (252)
273 3cvo_A Methyltransferase-like 98.7 9.1E-08 3.1E-12 79.5 10.2 103 157-272 30-156 (202)
274 3uzu_A Ribosomal RNA small sub 98.7 2.5E-08 8.4E-13 87.3 6.1 63 155-227 40-105 (279)
275 3gcz_A Polyprotein; flavivirus 98.6 6.1E-09 2.1E-13 90.0 2.0 106 155-269 88-201 (282)
276 3b5i_A S-adenosyl-L-methionine 98.6 3.4E-07 1.1E-11 83.1 13.1 131 140-270 34-226 (374)
277 2efj_A 3,7-dimethylxanthine me 98.6 1.5E-07 5.2E-12 85.5 10.8 106 158-271 53-227 (384)
278 3ua3_A Protein arginine N-meth 98.6 1.9E-08 6.5E-13 97.1 4.2 102 158-266 410-531 (745)
279 3ll7_A Putative methyltransfer 98.6 1.1E-08 3.6E-13 94.0 2.0 74 157-237 93-170 (410)
280 3eld_A Methyltransferase; flav 98.5 1E-07 3.5E-12 82.9 5.7 105 155-268 79-190 (300)
281 2oyr_A UPF0341 protein YHIQ; a 98.5 4.7E-08 1.6E-12 84.5 3.1 83 159-242 90-176 (258)
282 3khk_A Type I restriction-modi 98.5 2.3E-07 7.9E-12 88.4 7.7 105 159-268 246-394 (544)
283 3c6k_A Spermine synthase; sper 98.5 3.1E-07 1.1E-11 83.0 7.9 112 157-268 205-330 (381)
284 3lkd_A Type I restriction-modi 98.4 1.1E-06 3.8E-11 83.5 11.2 108 156-268 220-357 (542)
285 3s1s_A Restriction endonucleas 98.4 1E-06 3.4E-11 86.4 10.8 110 157-268 321-464 (878)
286 4fzv_A Putative methyltransfer 98.4 8.8E-07 3E-11 80.0 9.6 114 155-268 146-283 (359)
287 2k4m_A TR8_protein, UPF0146 pr 98.4 2.7E-07 9.4E-12 72.0 5.0 83 157-268 35-120 (153)
288 1m6e_X S-adenosyl-L-methionnin 98.4 3.8E-07 1.3E-11 82.2 6.3 108 157-269 51-209 (359)
289 2wk1_A NOVP; transferase, O-me 98.3 8.8E-07 3E-11 77.3 6.4 107 156-270 105-245 (282)
290 2px2_A Genome polyprotein [con 98.3 1.2E-06 4.2E-11 74.6 6.3 105 155-270 71-184 (269)
291 2qy6_A UPF0209 protein YFCK; s 98.3 8.3E-07 2.9E-11 76.6 5.3 109 157-267 60-211 (257)
292 3lkz_A Non-structural protein 98.2 3.9E-06 1.3E-10 72.8 8.2 103 155-268 92-203 (321)
293 4auk_A Ribosomal RNA large sub 98.1 1.3E-05 4.4E-10 72.2 10.2 96 155-267 209-304 (375)
294 1wg8_A Predicted S-adenosylmet 98.0 9.5E-06 3.3E-10 70.4 7.3 72 155-237 20-96 (285)
295 3p8z_A Mtase, non-structural p 98.0 4.6E-05 1.6E-09 64.1 10.6 103 155-268 76-185 (267)
296 3ufb_A Type I restriction-modi 97.6 0.00027 9.4E-09 67.0 10.4 108 155-268 215-361 (530)
297 2vz8_A Fatty acid synthase; tr 97.6 1.2E-05 4.3E-10 88.4 0.5 104 157-271 1240-1350(2512)
298 1rjd_A PPM1P, carboxy methyl t 97.5 0.0004 1.4E-08 62.0 9.8 115 157-273 97-236 (334)
299 2zig_A TTHA0409, putative modi 97.5 0.00016 5.4E-09 63.4 6.5 58 139-202 222-279 (297)
300 3g7u_A Cytosine-specific methy 97.4 0.00052 1.8E-08 62.2 8.7 101 159-272 3-121 (376)
301 2oo3_A Protein involved in cat 97.2 0.00031 1.1E-08 60.9 4.8 99 158-267 92-196 (283)
302 1g55_A DNA cytosine methyltran 97.0 0.00048 1.6E-08 61.7 4.5 69 158-237 2-75 (343)
303 3r24_A NSP16, 2'-O-methyl tran 97.0 0.00074 2.5E-08 58.6 4.9 93 155-268 107-216 (344)
304 2uyo_A Hypothetical protein ML 96.8 0.009 3.1E-07 52.6 10.7 105 159-268 104-217 (310)
305 2c7p_A Modification methylase 96.8 0.0031 1.1E-07 56.0 7.5 100 158-272 11-122 (327)
306 3tka_A Ribosomal RNA small sub 96.7 0.0024 8.2E-08 56.7 6.5 73 155-237 55-135 (347)
307 1g60_A Adenine-specific methyl 96.7 0.0024 8.2E-08 54.7 6.4 59 139-203 199-257 (260)
308 1i4w_A Mitochondrial replicati 96.6 0.0033 1.1E-07 56.4 6.7 58 158-224 59-117 (353)
309 3qv2_A 5-cytosine DNA methyltr 96.4 0.0054 1.9E-07 54.4 6.7 103 157-272 9-132 (327)
310 2qrv_A DNA (cytosine-5)-methyl 96.3 0.015 5.1E-07 50.8 8.9 106 156-272 14-142 (295)
311 3tos_A CALS11; methyltransfera 96.1 0.088 3E-06 44.9 12.3 106 157-270 69-218 (257)
312 3ubt_Y Modification methylase 96.0 0.017 5.7E-07 50.9 7.8 100 159-272 1-112 (331)
313 1pqw_A Polyketide synthase; ro 95.6 0.05 1.7E-06 43.9 8.3 92 155-269 36-137 (198)
314 3me5_A Cytosine-specific methy 95.5 0.019 6.4E-07 53.6 6.0 60 157-224 87-146 (482)
315 1f8f_A Benzyl alcohol dehydrog 95.4 0.096 3.3E-06 46.7 10.4 96 155-270 188-290 (371)
316 4ej6_A Putative zinc-binding d 95.4 0.13 4.5E-06 45.9 11.3 100 155-271 180-286 (370)
317 3vyw_A MNMC2; tRNA wobble urid 95.1 0.029 1E-06 49.1 5.8 104 157-266 96-223 (308)
318 3s2e_A Zinc-containing alcohol 94.9 0.063 2.2E-06 47.3 7.5 94 155-268 164-262 (340)
319 2dph_A Formaldehyde dismutase; 94.9 0.062 2.1E-06 48.6 7.5 99 155-269 183-299 (398)
320 4h0n_A DNMT2; SAH binding, tra 94.8 0.025 8.5E-07 50.2 4.5 68 159-237 4-76 (333)
321 2py6_A Methyltransferase FKBM; 94.7 0.056 1.9E-06 49.3 6.7 48 155-202 224-274 (409)
322 3fpc_A NADP-dependent alcohol 94.6 0.16 5.3E-06 45.0 9.2 95 155-269 164-266 (352)
323 3two_A Mannitol dehydrogenase; 94.5 0.054 1.9E-06 47.9 5.9 91 155-269 174-265 (348)
324 1v3u_A Leukotriene B4 12- hydr 94.4 0.09 3.1E-06 46.1 7.3 93 155-270 143-245 (333)
325 1zkd_A DUF185; NESG, RPR58, st 94.4 0.13 4.6E-06 46.4 8.4 46 157-202 80-133 (387)
326 1pl8_A Human sorbitol dehydrog 94.3 0.26 8.8E-06 43.7 10.1 98 155-269 169-273 (356)
327 3gms_A Putative NADPH:quinone 94.3 0.15 5E-06 45.0 8.4 95 155-270 142-244 (340)
328 1e3j_A NADP(H)-dependent ketos 94.3 0.24 8.2E-06 43.7 9.8 95 155-269 166-271 (352)
329 4b7c_A Probable oxidoreductase 93.8 0.19 6.3E-06 44.1 8.0 95 155-269 147-248 (336)
330 2j3h_A NADP-dependent oxidored 93.7 0.28 9.6E-06 43.1 9.1 93 155-269 153-255 (345)
331 3uog_A Alcohol dehydrogenase; 93.7 0.25 8.6E-06 43.9 8.7 96 155-271 187-289 (363)
332 3m6i_A L-arabinitol 4-dehydrog 93.5 0.2 6.7E-06 44.5 7.7 97 155-269 177-283 (363)
333 1kol_A Formaldehyde dehydrogen 93.4 0.26 8.7E-06 44.4 8.4 100 155-269 183-300 (398)
334 1rjw_A ADH-HT, alcohol dehydro 93.4 0.26 8.8E-06 43.4 8.2 92 155-268 162-260 (339)
335 3qwb_A Probable quinone oxidor 93.3 0.29 1E-05 42.8 8.5 94 155-269 146-247 (334)
336 3jyn_A Quinone oxidoreductase; 93.3 0.28 9.7E-06 42.8 8.3 96 155-271 138-241 (325)
337 1uuf_A YAHK, zinc-type alcohol 93.3 0.15 5E-06 45.7 6.5 95 155-269 192-288 (369)
338 1boo_A Protein (N-4 cytosine-s 93.2 0.19 6.6E-06 44.1 7.1 58 140-203 240-297 (323)
339 1jvb_A NAD(H)-dependent alcoho 93.2 0.23 7.7E-06 43.8 7.5 95 155-269 168-271 (347)
340 3ip1_A Alcohol dehydrogenase, 93.1 0.63 2.2E-05 41.9 10.6 100 155-269 211-318 (404)
341 2d8a_A PH0655, probable L-thre 93.1 0.61 2.1E-05 41.0 10.3 93 157-269 167-267 (348)
342 2eih_A Alcohol dehydrogenase; 93.0 0.35 1.2E-05 42.5 8.5 93 155-270 164-266 (343)
343 1yb5_A Quinone oxidoreductase; 93.0 0.39 1.3E-05 42.5 8.8 92 155-269 168-269 (351)
344 3jv7_A ADH-A; dehydrogenase, n 93.0 0.19 6.4E-06 44.3 6.7 95 155-270 169-271 (345)
345 2h6e_A ADH-4, D-arabinose 1-de 92.8 0.048 1.6E-06 48.2 2.6 95 157-269 170-269 (344)
346 4dvj_A Putative zinc-dependent 92.8 0.81 2.8E-05 40.6 10.6 93 157-268 171-269 (363)
347 1qor_A Quinone oxidoreductase; 92.7 0.39 1.3E-05 41.8 8.4 93 155-270 138-240 (327)
348 3fwz_A Inner membrane protein 92.7 0.76 2.6E-05 34.7 9.0 92 158-268 7-104 (140)
349 1cdo_A Alcohol dehydrogenase; 92.5 0.54 1.9E-05 41.8 9.2 95 155-269 190-294 (374)
350 4ft4_B DNA (cytosine-5)-methyl 92.3 0.17 5.7E-06 50.0 5.9 47 156-202 210-262 (784)
351 2hcy_A Alcohol dehydrogenase 1 92.2 0.45 1.5E-05 41.9 8.2 93 155-269 167-269 (347)
352 2j8z_A Quinone oxidoreductase; 92.1 0.53 1.8E-05 41.6 8.6 95 155-270 160-262 (354)
353 2fzw_A Alcohol dehydrogenase c 92.1 0.64 2.2E-05 41.3 9.1 95 155-269 188-292 (373)
354 1p0f_A NADP-dependent alcohol 92.1 0.6 2E-05 41.5 8.9 95 155-269 189-293 (373)
355 3ps9_A TRNA 5-methylaminomethy 92.1 0.18 6.1E-06 48.8 5.8 111 157-267 66-217 (676)
356 3uko_A Alcohol dehydrogenase c 92.1 0.5 1.7E-05 42.1 8.4 96 155-270 191-296 (378)
357 1eg2_A Modification methylase 92.0 0.27 9.1E-06 43.2 6.3 60 138-203 228-290 (319)
358 1e3i_A Alcohol dehydrogenase, 92.0 0.74 2.5E-05 40.9 9.4 95 155-269 193-297 (376)
359 2c0c_A Zinc binding alcohol de 91.9 0.66 2.3E-05 41.1 8.9 95 155-270 161-262 (362)
360 2dq4_A L-threonine 3-dehydroge 91.9 0.29 1E-05 43.0 6.5 90 157-269 164-262 (343)
361 4eye_A Probable oxidoreductase 91.9 0.35 1.2E-05 42.6 7.0 93 155-269 157-257 (342)
362 2jhf_A Alcohol dehydrogenase E 91.9 0.7 2.4E-05 41.1 9.1 95 155-269 189-293 (374)
363 1wly_A CAAR, 2-haloacrylate re 91.8 0.55 1.9E-05 41.0 8.2 93 155-270 143-245 (333)
364 3nx4_A Putative oxidoreductase 91.6 0.34 1.2E-05 42.1 6.6 90 160-269 149-241 (324)
365 3goh_A Alcohol dehydrogenase, 91.6 0.27 9.3E-06 42.6 5.9 88 155-268 140-228 (315)
366 2zig_A TTHA0409, putative modi 91.4 0.11 3.6E-06 45.2 3.0 56 213-268 21-96 (297)
367 3krt_A Crotonyl COA reductase; 91.2 0.89 3E-05 41.7 9.2 97 155-269 226-344 (456)
368 3pvc_A TRNA 5-methylaminomethy 91.1 0.18 6.2E-06 49.0 4.6 110 157-267 58-209 (689)
369 2zb4_A Prostaglandin reductase 91.0 0.88 3E-05 40.1 8.8 93 155-269 156-260 (357)
370 1xa0_A Putative NADPH dependen 90.9 0.38 1.3E-05 41.9 6.1 97 155-269 146-246 (328)
371 1vj0_A Alcohol dehydrogenase, 90.8 0.63 2.1E-05 41.6 7.6 96 155-270 193-299 (380)
372 3iei_A Leucine carboxyl methyl 90.7 3.4 0.00012 36.4 12.1 114 158-273 91-233 (334)
373 2b5w_A Glucose dehydrogenase; 90.5 0.56 1.9E-05 41.5 6.9 89 159-270 174-274 (357)
374 4dup_A Quinone oxidoreductase; 90.5 0.39 1.3E-05 42.5 5.9 95 155-270 165-266 (353)
375 4eso_A Putative oxidoreductase 90.4 0.84 2.9E-05 38.2 7.7 104 157-271 7-140 (255)
376 4f3n_A Uncharacterized ACR, CO 90.2 0.46 1.6E-05 43.5 6.2 44 158-201 138-187 (432)
377 4a2c_A Galactitol-1-phosphate 90.2 2 6.8E-05 37.4 10.3 97 155-271 158-262 (346)
378 1iz0_A Quinone oxidoreductase; 89.8 0.12 4E-06 44.7 1.9 93 155-269 123-218 (302)
379 3c85_A Putative glutathione-re 89.8 2.3 7.9E-05 33.3 9.5 92 158-268 39-138 (183)
380 4dcm_A Ribosomal RNA large sub 89.7 1.9 6.4E-05 38.6 9.8 112 137-268 24-135 (375)
381 1piw_A Hypothetical zinc-type 89.7 0.32 1.1E-05 43.1 4.7 96 155-269 177-276 (360)
382 1tt7_A YHFP; alcohol dehydroge 89.3 0.46 1.6E-05 41.4 5.3 96 156-269 148-247 (330)
383 2cdc_A Glucose dehydrogenase g 88.7 0.95 3.3E-05 40.1 7.1 89 158-270 181-279 (366)
384 3pxx_A Carveol dehydrogenase; 88.7 1.1 3.7E-05 37.9 7.2 104 157-268 9-152 (287)
385 3oig_A Enoyl-[acyl-carrier-pro 88.6 1.4 4.7E-05 36.9 7.7 108 157-271 6-149 (266)
386 4eez_A Alcohol dehydrogenase 1 88.5 2.9 9.8E-05 36.4 10.1 97 155-268 161-262 (348)
387 1lss_A TRK system potassium up 88.4 4.4 0.00015 29.7 9.7 89 158-266 4-100 (140)
388 3iht_A S-adenosyl-L-methionine 88.4 0.96 3.3E-05 35.4 5.8 108 157-277 40-155 (174)
389 3swr_A DNA (cytosine-5)-methyl 87.9 0.47 1.6E-05 48.0 4.8 47 156-202 538-585 (1002)
390 3av4_A DNA (cytosine-5)-methyl 87.4 1.6 5.4E-05 45.5 8.5 46 157-202 850-896 (1330)
391 3ggo_A Prephenate dehydrogenas 87.4 3 0.0001 36.3 9.2 88 159-266 34-125 (314)
392 3l9w_A Glutathione-regulated p 87.1 2.5 8.6E-05 38.3 8.9 90 158-268 4-101 (413)
393 3llv_A Exopolyphosphatase-rela 86.9 3.8 0.00013 30.4 8.6 87 159-267 7-101 (141)
394 3gaz_A Alcohol dehydrogenase s 86.8 1.2 4.1E-05 39.1 6.5 91 155-269 148-246 (343)
395 4a0s_A Octenoyl-COA reductase/ 86.7 1.2 4.2E-05 40.5 6.7 97 155-269 218-336 (447)
396 3fbg_A Putative arginate lyase 86.6 2.2 7.5E-05 37.4 8.1 91 157-268 150-247 (346)
397 3ius_A Uncharacterized conserv 86.5 3.9 0.00014 34.1 9.4 92 159-268 6-101 (286)
398 3tqh_A Quinone oxidoreductase; 86.0 2.4 8.1E-05 36.7 7.9 92 155-268 150-244 (321)
399 3grk_A Enoyl-(acyl-carrier-pro 85.5 2.8 9.7E-05 35.7 8.0 106 157-271 30-171 (293)
400 1yqd_A Sinapyl alcohol dehydro 85.2 0.5 1.7E-05 42.0 3.1 91 157-269 187-282 (366)
401 2cf5_A Atccad5, CAD, cinnamyl 85.2 0.38 1.3E-05 42.6 2.3 94 157-269 180-275 (357)
402 1boo_A Protein (N-4 cytosine-s 84.9 0.48 1.6E-05 41.6 2.8 57 212-268 13-83 (323)
403 3ek2_A Enoyl-(acyl-carrier-pro 84.8 2.2 7.4E-05 35.5 6.9 106 156-270 12-154 (271)
404 2vn8_A Reticulon-4-interacting 84.2 1.2 4.2E-05 39.5 5.3 94 155-268 181-279 (375)
405 3edm_A Short chain dehydrogena 84.2 2.3 8E-05 35.4 6.8 105 157-269 7-143 (259)
406 3d1l_A Putative NADP oxidoredu 83.6 5.5 0.00019 33.2 8.9 90 158-268 10-101 (266)
407 4g81_D Putative hexonate dehyd 83.6 1.6 5.4E-05 36.9 5.4 107 157-271 8-147 (255)
408 3ijr_A Oxidoreductase, short c 83.1 3.5 0.00012 35.1 7.6 105 157-269 46-182 (291)
409 3gqv_A Enoyl reductase; medium 82.5 4.6 0.00016 35.7 8.3 93 156-269 163-263 (371)
410 1wma_A Carbonyl reductase [NAD 81.0 1.4 4.8E-05 36.6 4.1 102 158-268 4-137 (276)
411 4fgs_A Probable dehydrogenase 80.0 5.3 0.00018 34.0 7.5 102 157-269 28-159 (273)
412 1qsg_A Enoyl-[acyl-carrier-pro 79.8 11 0.00038 31.2 9.5 101 158-270 9-149 (265)
413 2g1u_A Hypothetical protein TM 79.4 3.3 0.00011 31.5 5.6 94 157-268 18-117 (155)
414 3v2g_A 3-oxoacyl-[acyl-carrier 78.9 5.7 0.0002 33.3 7.4 105 157-269 30-165 (271)
415 3r3s_A Oxidoreductase; structu 78.9 4 0.00014 34.7 6.5 107 157-271 48-187 (294)
416 2g5c_A Prephenate dehydrogenas 78.6 10 0.00036 31.7 9.0 91 160-270 3-97 (281)
417 3is3_A 17BETA-hydroxysteroid d 78.5 6.1 0.00021 33.0 7.4 107 157-271 17-154 (270)
418 4hp8_A 2-deoxy-D-gluconate 3-d 77.9 6.9 0.00024 32.8 7.4 69 157-237 8-86 (247)
419 1spx_A Short-chain reductase f 77.9 3.3 0.00011 34.7 5.6 74 158-239 6-95 (278)
420 3k96_A Glycerol-3-phosphate de 77.9 11 0.00039 33.2 9.2 101 158-268 29-132 (356)
421 3g0o_A 3-hydroxyisobutyrate de 77.9 5.6 0.00019 34.0 7.1 89 158-267 7-100 (303)
422 2zwa_A Leucine carboxyl methyl 77.9 8.3 0.00028 37.2 9.0 115 157-273 107-258 (695)
423 3l4b_C TRKA K+ channel protien 77.8 10 0.00035 30.5 8.4 88 160-267 2-97 (218)
424 1eg2_A Modification methylase 76.9 0.77 2.7E-05 40.2 1.3 55 214-268 39-105 (319)
425 2ew2_A 2-dehydropantoate 2-red 76.7 14 0.00048 31.1 9.3 103 159-269 4-108 (316)
426 3pi7_A NADH oxidoreductase; gr 76.6 3 0.0001 36.5 5.0 92 159-271 166-265 (349)
427 1id1_A Putative potassium chan 76.5 13 0.00044 27.9 8.2 92 159-268 4-104 (153)
428 2eez_A Alanine dehydrogenase; 75.6 1 3.5E-05 40.2 1.7 98 157-268 165-265 (369)
429 3u5t_A 3-oxoacyl-[acyl-carrier 75.5 5.3 0.00018 33.5 6.2 104 158-269 27-161 (267)
430 2f1k_A Prephenate dehydrogenas 75.4 12 0.0004 31.3 8.4 86 160-267 2-89 (279)
431 2vhw_A Alanine dehydrogenase; 75.2 1.2 4.1E-05 39.9 2.1 97 157-268 167-267 (377)
432 2dpo_A L-gulonate 3-dehydrogen 75.1 8.7 0.0003 33.4 7.6 100 159-266 7-120 (319)
433 1xg5_A ARPG836; short chain de 74.8 14 0.00049 30.7 8.8 76 158-239 32-120 (279)
434 3k31_A Enoyl-(acyl-carrier-pro 74.8 6.3 0.00022 33.5 6.6 106 157-271 29-170 (296)
435 1g0o_A Trihydroxynaphthalene r 74.6 5.7 0.00019 33.4 6.2 106 158-271 29-165 (283)
436 2i6t_A Ubiquitin-conjugating e 73.3 5.6 0.00019 34.4 5.8 101 157-270 13-126 (303)
437 1hdc_A 3-alpha, 20 beta-hydrox 72.7 11 0.00038 31.0 7.5 70 158-238 5-87 (254)
438 1pjc_A Protein (L-alanine dehy 72.5 1 3.6E-05 40.0 1.0 99 157-268 166-266 (361)
439 2km1_A Protein DRE2; yeast, an 72.2 1.4 4.8E-05 33.6 1.4 41 226-267 55-96 (136)
440 2hwk_A Helicase NSP2; rossman 72.0 3.5 0.00012 35.5 4.0 56 214-270 190-255 (320)
441 3f9i_A 3-oxoacyl-[acyl-carrier 71.7 7.8 0.00027 31.7 6.2 73 156-239 12-93 (249)
442 3ksu_A 3-oxoacyl-acyl carrier 71.7 6.6 0.00023 32.7 5.8 103 157-268 10-146 (262)
443 3c24_A Putative oxidoreductase 71.6 17 0.00057 30.6 8.4 84 159-266 12-98 (286)
444 1zcj_A Peroxisomal bifunctiona 71.3 15 0.00052 33.6 8.6 100 158-266 37-147 (463)
445 3hwr_A 2-dehydropantoate 2-red 71.3 14 0.00047 31.8 7.9 101 158-270 19-121 (318)
446 1bg6_A N-(1-D-carboxylethyl)-L 71.2 9 0.00031 33.2 6.8 100 159-268 5-108 (359)
447 4fn4_A Short chain dehydrogena 71.1 9.1 0.00031 32.1 6.5 73 157-237 6-91 (254)
448 4e12_A Diketoreductase; oxidor 70.3 9.1 0.00031 32.4 6.5 100 159-266 5-118 (283)
449 3b1f_A Putative prephenate deh 70.1 23 0.00077 29.7 9.0 88 159-266 7-98 (290)
450 3tri_A Pyrroline-5-carboxylate 69.1 7.3 0.00025 33.0 5.6 87 159-266 4-95 (280)
451 3imf_A Short chain dehydrogena 68.1 14 0.00047 30.5 7.0 73 158-238 6-91 (257)
452 3gt0_A Pyrroline-5-carboxylate 67.8 3.1 0.00011 34.5 2.9 87 159-266 3-94 (247)
453 3qiv_A Short-chain dehydrogena 67.7 11 0.00038 30.8 6.4 74 157-238 8-94 (253)
454 2aef_A Calcium-gated potassium 67.7 19 0.00064 29.2 7.7 90 158-268 9-104 (234)
455 2cvz_A Dehydrogenase, 3-hydrox 67.6 18 0.00062 30.1 7.8 85 160-268 3-89 (289)
456 3ucx_A Short chain dehydrogena 67.4 14 0.00047 30.7 6.9 74 157-238 10-96 (264)
457 3h7a_A Short chain dehydrogena 66.8 8.6 0.0003 31.7 5.5 75 157-239 6-92 (252)
458 3dmg_A Probable ribosomal RNA 66.6 7.7 0.00026 34.6 5.4 95 158-270 46-141 (381)
459 3qha_A Putative oxidoreductase 66.3 4.1 0.00014 34.8 3.4 86 159-267 16-103 (296)
460 3trk_A Nonstructural polyprote 65.8 2 6.9E-05 36.5 1.2 44 225-268 206-258 (324)
461 1g60_A Adenine-specific methyl 65.5 4.7 0.00016 33.8 3.5 55 214-268 5-73 (260)
462 2h78_A Hibadh, 3-hydroxyisobut 65.4 6.1 0.00021 33.6 4.4 87 159-267 4-95 (302)
463 3v8b_A Putative dehydrogenase, 65.3 20 0.00069 30.1 7.6 74 158-239 28-114 (283)
464 3tjr_A Short chain dehydrogena 65.1 14 0.00047 31.4 6.6 75 157-239 30-117 (301)
465 2wyu_A Enoyl-[acyl carrier pro 64.7 8.4 0.00029 31.9 5.0 104 158-270 8-147 (261)
466 1zsy_A Mitochondrial 2-enoyl t 64.7 13 0.00046 32.3 6.6 97 155-269 165-270 (357)
467 1cyd_A Carbonyl reductase; sho 64.4 32 0.0011 27.6 8.6 70 158-239 7-85 (244)
468 3gaf_A 7-alpha-hydroxysteroid 63.6 15 0.00052 30.2 6.4 75 157-239 11-98 (256)
469 4dkj_A Cytosine-specific methy 63.4 6.9 0.00024 35.3 4.4 45 158-202 10-60 (403)
470 4a27_A Synaptic vesicle membra 63.0 8.9 0.0003 33.4 5.0 91 155-269 140-238 (349)
471 3rkr_A Short chain oxidoreduct 62.9 14 0.00049 30.5 6.1 75 157-239 28-115 (262)
472 3sju_A Keto reductase; short-c 62.8 18 0.00061 30.3 6.8 73 158-238 24-109 (279)
473 3o38_A Short chain dehydrogena 62.8 20 0.00069 29.5 7.1 76 157-239 21-110 (266)
474 4e21_A 6-phosphogluconate dehy 62.6 8.1 0.00028 34.2 4.7 89 159-267 23-113 (358)
475 1lnq_A MTHK channels, potassiu 62.2 29 0.00099 29.8 8.2 89 158-268 115-210 (336)
476 3i83_A 2-dehydropantoate 2-red 61.6 28 0.00096 29.8 8.0 97 159-270 3-106 (320)
477 3lyl_A 3-oxoacyl-(acyl-carrier 61.4 17 0.00057 29.6 6.2 73 158-238 5-90 (247)
478 3tfo_A Putative 3-oxoacyl-(acy 61.3 15 0.00053 30.6 6.1 73 158-238 4-89 (264)
479 3ppi_A 3-hydroxyacyl-COA dehyd 60.8 22 0.00074 29.6 7.0 70 157-237 29-110 (281)
480 2p91_A Enoyl-[acyl-carrier-pro 60.6 26 0.0009 29.2 7.5 104 158-270 21-161 (285)
481 1gu7_A Enoyl-[acyl-carrier-pro 60.2 15 0.00051 32.0 6.1 97 155-269 164-275 (364)
482 2h7i_A Enoyl-[acyl-carrier-pro 59.9 16 0.00056 30.2 6.0 102 158-270 7-149 (269)
483 1lld_A L-lactate dehydrogenase 59.8 43 0.0015 28.4 8.9 104 157-270 6-125 (319)
484 3tox_A Short chain dehydrogena 59.4 15 0.00052 30.9 5.7 73 158-238 8-93 (280)
485 2pd4_A Enoyl-[acyl-carrier-pro 58.9 35 0.0012 28.2 8.0 101 158-270 6-145 (275)
486 1mxh_A Pteridine reductase 2; 58.8 68 0.0023 26.3 9.8 75 158-239 11-103 (276)
487 3ioy_A Short-chain dehydrogena 58.8 19 0.00066 30.8 6.4 76 158-239 8-96 (319)
488 1zem_A Xylitol dehydrogenase; 58.1 26 0.00089 28.8 6.9 73 158-238 7-92 (262)
489 1vpd_A Tartronate semialdehyde 57.4 8.6 0.00029 32.5 3.8 87 159-267 6-97 (299)
490 3awd_A GOX2181, putative polyo 57.2 24 0.00083 28.7 6.6 73 158-238 13-98 (260)
491 2hmt_A YUAA protein; RCK, KTN, 57.2 41 0.0014 24.1 7.3 88 159-267 7-102 (144)
492 3uve_A Carveol dehydrogenase ( 56.7 28 0.00097 29.0 7.0 74 157-238 10-112 (286)
493 3svt_A Short-chain type dehydr 56.6 26 0.00089 29.1 6.8 76 158-238 11-99 (281)
494 1yb1_A 17-beta-hydroxysteroid 56.6 25 0.00084 29.1 6.6 74 158-239 31-117 (272)
495 3pgx_A Carveol dehydrogenase; 56.6 29 0.00098 28.9 7.0 74 157-238 14-113 (280)
496 3o8q_A Shikimate 5-dehydrogena 56.6 32 0.0011 29.2 7.3 72 157-241 125-198 (281)
497 2jah_A Clavulanic acid dehydro 56.5 27 0.00092 28.5 6.7 73 158-238 7-92 (247)
498 3r1i_A Short-chain type dehydr 56.4 16 0.00056 30.5 5.4 75 157-239 31-118 (276)
499 3o26_A Salutaridine reductase; 55.9 25 0.00087 29.3 6.6 76 157-239 11-100 (311)
500 1hyh_A L-hicdh, L-2-hydroxyiso 55.7 63 0.0021 27.4 9.2 103 160-270 3-123 (309)
No 1
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.94 E-value=3.5e-26 Score=197.33 Aligned_cols=189 Identities=40% Similarity=0.763 Sum_probs=152.5
Q ss_pred CcccccccccCCCcccccHHHHHHHhhcCCcccchhhhHHHHHHHhhhhcccccccccccCccccccccccchHHHHHHH
Q 023562 66 SSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQML 145 (280)
Q Consensus 66 ~~~~~~~~~~~~g~~~~~~~e~w~~~l~~~~~~~~~~~~~y~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 145 (280)
+..+...|.++.|+.|.+.+++|++.+..... .....||....+||+.....+++.+.++........ .++..+
T Consensus 12 ~~~~~~~g~d~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 85 (254)
T 1xtp_A 12 SRNLPISGRDTNGKTYRSTDEMWKAELTGDLY--DPEKGWYGKALEYWRTVPATVSGVLGGMDHVHDVDI----EGSRNF 85 (254)
T ss_dssp -CCCCCCEEETTSCEESCHHHHHHHHSCSCTT--CTTTCHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHH----HHHHHH
T ss_pred cccccccccCCCCcccccHHHHHHHHHhcccc--ccchhhhhhhhhHHhcCCccccceecCcCccCHHHH----HHHHHH
Confidence 56677899999999999999999998776432 222358888899999988888777776654332222 233333
Q ss_pred HhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC
Q 023562 146 LSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (280)
Q Consensus 146 l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 225 (280)
+.. +. ..++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++.. ..++++.++|+.+++
T Consensus 86 l~~-l~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 86 IAS-LP---GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG--------MPVGKFILASMETAT 153 (254)
T ss_dssp HHT-ST---TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT--------SSEEEEEESCGGGCC
T ss_pred HHh-hc---ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc--------CCceEEEEccHHHCC
Confidence 332 22 346789999999999999999988766799999999999999999865 256899999999888
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+++++||+|++..+++|++++++..+++++.++|||||++++.+++.
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 200 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCS 200 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 77789999999999999987788999999999999999999999754
No 2
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.89 E-value=3.7e-23 Score=177.57 Aligned_cols=164 Identities=45% Similarity=0.907 Sum_probs=130.3
Q ss_pred hhhHHHHHHHhhhhcccccccccccCccccccccccchHHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcC
Q 023562 101 KKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF 180 (280)
Q Consensus 101 ~~~~~y~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~ 180 (280)
....||+...+||+.....++.+++++..+...+......++..++..... ..++.+|||+|||+|.++..+++.+.
T Consensus 26 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~ 102 (241)
T 2ex4_A 26 DEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPN---KTGTSCALDCGAGIGRITKRLLLPLF 102 (241)
T ss_dssp CHHHHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC-------CCCCSEEEEETCTTTHHHHHTTTTTC
T ss_pred ccchhHHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhccc---CCCCCEEEEECCCCCHHHHHHHHhcC
Confidence 345788888999999888888877776655444444444555555433211 23568999999999999999887776
Q ss_pred CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCC
Q 023562 181 NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLK 260 (280)
Q Consensus 181 ~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~Lk 260 (280)
.+|+++|+|+.|++.|++++...+ ..++++.++|+.++++++++||+|++..+++|++++++..+++++.++|+
T Consensus 103 ~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 103 REVDMVDITEDFLVQAKTYLGEEG------KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLR 176 (241)
T ss_dssp SEEEEEESCHHHHHHHHHHTGGGG------GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred CEEEEEeCCHHHHHHHHHHhhhcC------CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcC
Confidence 589999999999999999986531 24688999999888877679999999999999997778899999999999
Q ss_pred CCcEEEEEeccCC
Q 023562 261 PGGFFVLKENIAR 273 (280)
Q Consensus 261 pGG~lii~e~~~~ 273 (280)
|||++++.+++..
T Consensus 177 pgG~l~i~~~~~~ 189 (241)
T 2ex4_A 177 PNGIIVIKDNMAQ 189 (241)
T ss_dssp EEEEEEEEEEEBS
T ss_pred CCeEEEEEEccCC
Confidence 9999999987643
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.85 E-value=8.1e-21 Score=165.60 Aligned_cols=112 Identities=14% Similarity=0.269 Sum_probs=98.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC---cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN---EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~---~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (280)
..++.+|||+|||+|..+..++++... +|+|+|+|+.||+.|++++...+. ..+++++++|+.+++.+ +|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----PTPVDVIEGDIRDIAIE--NA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCTTTCCCC--SE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----CceEEEeeccccccccc--cc
Confidence 346789999999999999999876432 799999999999999999876543 46799999999998754 69
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
|+|+++++++|+++++...++++++++|||||.|+++|.+..
T Consensus 141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 999999999999988888999999999999999999988754
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.81 E-value=1.4e-19 Score=154.09 Aligned_cols=110 Identities=22% Similarity=0.389 Sum_probs=97.5
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..+++... .+|+++|+|+.|++.|++++... .++++.++|+.+++++ ++||+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--------LKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--------TTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--------CCEEEEeCchhccCCC-CCceE
Confidence 34568999999999999999998853 37999999999999999998763 3799999999998877 89999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
|++..+++|+++++...+++++.++|||||++++.+.+..
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 9999999999977777899999999999999999987643
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.81 E-value=5.5e-20 Score=154.23 Aligned_cols=111 Identities=11% Similarity=0.004 Sum_probs=90.9
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCC---C---CCCCcceeEEEccCCCCCCCC-
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM---A---PDMHKATNFFCVPLQDFTPET- 228 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~---~---~~~~~~i~~~~~d~~~~~~~~- 228 (280)
.++.+|||+|||+|..+..|+++++ +|+|+|+|+.||+.|+++....... . .....+++++++|+.++++.+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 4667999999999999999998876 6999999999999999886431000 0 000246899999999987654
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
++||+|++..+++|+++++...++++++++|||||++++
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 689999999999999987888999999999999998443
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.81 E-value=3e-19 Score=150.58 Aligned_cols=104 Identities=26% Similarity=0.285 Sum_probs=92.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +++++|+|+.|++.++++.. .++++.++|+.+++.+ ++||+|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP----------KEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC----------TTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC----------CceEEEeCChhhcCCC-CCeEEEEE
Confidence 567999999999999999998855 69999999999999999875 2588999999998877 89999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
..+++|+++++...+++++.++|||||.+++.+...
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 999999997766669999999999999999997653
No 7
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=3.2e-19 Score=148.68 Aligned_cols=103 Identities=20% Similarity=0.336 Sum_probs=93.1
Q ss_pred CccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEcc
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~ 237 (280)
+.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++. .++++.++|+.+++.++++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-----------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-----------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-----------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 57999999999999999998866 6999999999999999984 35889999999887767899999999
Q ss_pred chhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
.+++|+++++...+++++.++|+|||++++.+...
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 99999988888999999999999999999987553
No 8
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.80 E-value=6.7e-19 Score=155.38 Aligned_cols=112 Identities=20% Similarity=0.265 Sum_probs=98.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.|++.|+++....++ ..++++.++|+.++++++++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL-----ADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEEcCcccCCCCCCCEeEE
Confidence 456789999999999999999887444799999999999999998765443 457999999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
++..+++|++ +...+++++.++|||||++++.+....
T Consensus 155 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 155 WSQDAFLHSP--DKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EecchhhhcC--CHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 9999999998 577999999999999999999987643
No 9
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.80 E-value=8.3e-19 Score=154.04 Aligned_cols=110 Identities=17% Similarity=0.211 Sum_probs=96.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.+++.|++++...++ ..++++..+|+.+++ ++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN-----LRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC-----CSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-----CCCeEEEECChhhCC---CCeeEE
Confidence 456789999999999999999865445899999999999999999876543 357899999998765 789999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++..+++|+++++...+++++.++|||||.+++.+...
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 99999999977788999999999999999999987654
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.79 E-value=7e-19 Score=152.12 Aligned_cols=111 Identities=20% Similarity=0.246 Sum_probs=99.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.|++.|+++... ..++++.++|+.+++.++++||+|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG--------NNKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS--------CTTEEEEECCTTTCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc--------CCCeEEEECccccCCCCCCcEEEE
Confidence 556789999999999999999987544799999999999999998765 257999999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
++..+++|+++++...+++++.++|||||.+++.+....
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999999999777999999999999999999999987543
No 11
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=4.2e-19 Score=153.96 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=92.1
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcC-------CCCCC----CCCcceeEEEccCCCC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE-------NHMAP----DMHKATNFFCVPLQDF 224 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~-------~~~~~----~~~~~i~~~~~d~~~~ 224 (280)
.++.+|||+|||+|..+..|+++++ +|+|+|+|+.||+.|+++.... ..... ....+++|.++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 3567999999999999999998887 5999999999999998776310 00000 0135799999999998
Q ss_pred CCCC-CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 225 TPET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 225 ~~~~-~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
++.+ ++||+|++..+++|+++++...+++++.++|||||++++.
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 7653 7999999999999999888889999999999999999754
No 12
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=1.4e-18 Score=151.38 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=98.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.+++.+++++...++ ..++++..+|+.+++.++++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL-----ANRVTFSYADAMDLPFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECccccCCCCCCCccEE
Confidence 456789999999999999999887555899999999999999998876543 356999999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
++..+++|++ +...+++++.++|||||.+++.+....
T Consensus 134 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 134 WALESLHHMP--DRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp EEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred EEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 9999999998 567999999999999999999986643
No 13
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.79 E-value=9.3e-19 Score=147.57 Aligned_cols=115 Identities=21% Similarity=0.146 Sum_probs=96.5
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.++.+|||+|||+|.++..+++.+. .+|+++|+|+.|++.|++++...++... ...++++.++|+...+...++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRN-QWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHH-HHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcc-cCcceEEEeCCcccccccCCCcCEE
Confidence 3567999999999999999988765 3899999999999999999876543100 0127999999997776556799999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++..+++|++++++..+++++.++|||||+++++.+.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 9999999999888899999999999999988887664
No 14
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=2.2e-19 Score=156.16 Aligned_cols=99 Identities=20% Similarity=0.284 Sum_probs=86.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
.+.+|||||||+|.++..|++++. +|+|+|+|+.|++.|++ ..++++.+++++++++++++||+|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~------------~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR------------HPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC------------CTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh------------cCCceeehhhhhhhcccCCcccEEEE
Confidence 456899999999999999887765 69999999999987653 24699999999999988899999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
..++||++ ...+++++.|+|||||.|++..+.
T Consensus 106 ~~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 106 AQAMHWFD---LDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp CSCCTTCC---HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eeehhHhh---HHHHHHHHHHHcCCCCEEEEEECC
Confidence 99998875 347999999999999999987653
No 15
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.78 E-value=1.9e-18 Score=153.16 Aligned_cols=110 Identities=16% Similarity=0.177 Sum_probs=96.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.|++.|++++...++ ..++++..+|+.++ +++||+|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~---~~~fD~v 141 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS-----PRRKEVRIQGWEEF---DEPVDRI 141 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC-----SSCEEEEECCGGGC---CCCCSEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECCHHHc---CCCccEE
Confidence 456789999999999999999988446799999999999999999877544 45799999999887 4899999
Q ss_pred EccchhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 235 WVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 235 ~~~~~l~~~~~-------~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++..+++|+++ +++..+++++.++|||||++++.+...
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 99999999943 567899999999999999999987754
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.78 E-value=1.3e-18 Score=149.85 Aligned_cols=104 Identities=17% Similarity=0.252 Sum_probs=93.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|+++... .++++.++|+.+++.++++||+|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS---------PVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC---------TTEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc---------CCeEEEEcchhhCCCCCCCeEEE
Confidence 346789999999999999999988776899999999999999998762 46899999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
++..+++|++ +...+++++.++|||||.++++.
T Consensus 113 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 113 LSSLALHYIA--SFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEchhhhhhh--hHHHHHHHHHHHcCCCcEEEEEe
Confidence 9999999997 77899999999999999999973
No 17
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.78 E-value=9.7e-19 Score=151.47 Aligned_cols=109 Identities=19% Similarity=0.253 Sum_probs=95.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|++++...++ .++++.++|+.++++++++||+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH------QQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCC-CCCSCTTCEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEecHHhCCCCCCCEEEE
Confidence 34667999999999999999887765 799999999999999998765432 36899999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+++.+++|++ +...+++++.++|||||++++.++..
T Consensus 108 ~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 108 TCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred EEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 9999999998 66799999999999999999987654
No 18
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=1.7e-18 Score=145.36 Aligned_cols=105 Identities=21% Similarity=0.317 Sum_probs=92.5
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.+++.. ..++++.++|+.++ ..+++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~----------~~~~~~~~~d~~~~-~~~~~~D~v~ 112 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGRHG----------LDNVEFRQQDLFDW-TPDRQWDAVF 112 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGGGC----------CTTEEEEECCTTSC-CCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHhcC----------CCCeEEEecccccC-CCCCceeEEE
Confidence 3556999999999999999998855 6999999999999998821 25699999999988 5568999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++.+++|++++++..+++++.++|+|||.+++.++..
T Consensus 113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 9999999998778899999999999999999997754
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.78 E-value=1.2e-18 Score=146.90 Aligned_cols=114 Identities=20% Similarity=0.181 Sum_probs=95.7
Q ss_pred CCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..+++.+. .+|+++|+|+.|++.|++++...++... ...++++.++|+...+..+++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEM-QRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHH-HHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccc-cCcceEEEeCcccccccccCCCCEEE
Confidence 567999999999999999987765 3899999999999999999876432000 00179999999977776668999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+..+++|++++++..+++++.++|||||+++++.+.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 999999999888889999999999999988887664
No 20
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.77 E-value=2.7e-18 Score=153.09 Aligned_cols=111 Identities=18% Similarity=0.239 Sum_probs=96.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.|++.|+++....++ ..++++..+|+.+++ ++||+|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT-----NRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECChHHCC---CCcCEE
Confidence 456789999999999999999987333799999999999999999876543 356899999998774 789999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
++..+++|++++++..+++++.++|||||.+++.+....
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 999999999877899999999999999999999877643
No 21
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=1.4e-18 Score=149.84 Aligned_cols=110 Identities=17% Similarity=0.108 Sum_probs=96.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.|++.|++++...++ ..++++.++|+.++++ +++||+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV-----SERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECChHhCCc-CCCCCEE
Confidence 456789999999999999999887554799999999999999999876543 3579999999999877 6899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++..+++|++ +...+++++.++|||||.+++.+...
T Consensus 108 ~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 108 ACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp EEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred EECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 9999999998 56799999999999999999987653
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.77 E-value=7.8e-19 Score=150.00 Aligned_cols=103 Identities=16% Similarity=0.127 Sum_probs=92.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.. ..+++++++|+.+++.++++||+|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE---------GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC---------BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc---------cCCceEEEcchhcCCCCCCCccEEEE
Confidence 567999999999999999998865 69999999999999998853 35789999999998877789999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
..+++|++ +...+++++.++|+|||++++.+..
T Consensus 123 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 123 INSLEWTE--EPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp ESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 99999997 6679999999999999999998743
No 23
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=1.9e-18 Score=145.35 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=93.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++.... .+++++++|+.+++ ++++||+|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~-~~~~fD~v 118 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRW--------SHISWAATDILQFS-TAELFDLI 118 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTC--------SSEEEEECCTTTCC-CSCCEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccC--------CCeEEEEcchhhCC-CCCCccEE
Confidence 44668999999999999999987765 6999999999999999998762 47999999999987 45899999
Q ss_pred EccchhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 235 ~~~~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+++.+++|+++ +++..+++++.++|||||++++...
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99999999995 5567899999999999999999753
No 24
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.77 E-value=2.9e-18 Score=147.82 Aligned_cols=109 Identities=18% Similarity=0.221 Sum_probs=96.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.|++++...++ ..++++.++|+.+++.++++||+|
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 118 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC-----ADRVKGITGSMDNLPFQNEELDLI 118 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCCCCCCEEEE
Confidence 446679999999999999999988766899999999999999999877554 456999999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++..+++|++ ...+++++.++|||||++++.+..
T Consensus 119 ~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 119 WSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp EEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEee
Confidence 9999999983 568999999999999999999854
No 25
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.77 E-value=5.8e-18 Score=141.60 Aligned_cols=117 Identities=16% Similarity=0.208 Sum_probs=98.5
Q ss_pred HHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccC
Q 023562 142 LQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (280)
Q Consensus 142 l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~ 221 (280)
+...+...+ .++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++... ..++++.++|+
T Consensus 32 ~~~~l~~~~-----~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--------~~~i~~~~~d~ 98 (215)
T 2pxx_A 32 FRALLEPEL-----RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--------VPQLRWETMDV 98 (215)
T ss_dssp HHHHHGGGC-----CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--------CTTCEEEECCT
T ss_pred HHHHHHHhc-----CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--------CCCcEEEEcch
Confidence 455554432 35679999999999999999988775799999999999999998764 24689999999
Q ss_pred CCCCCCCCcEEEEEccchhhcCC-------------hhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 222 QDFTPETGRYDVIWVQWCIGHLT-------------DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 222 ~~~~~~~~~fDlV~~~~~l~~~~-------------~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
.+++.++++||+|+++.+++++. ..+...+++++.++|||||.+++.+..
T Consensus 99 ~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 99 RKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp TSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 98877678999999999887765 346789999999999999999998764
No 26
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.77 E-value=1.2e-18 Score=145.97 Aligned_cols=107 Identities=19% Similarity=0.182 Sum_probs=94.3
Q ss_pred ccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccc
Q 023562 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQW 238 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~ 238 (280)
.+|||+|||+|.++..+++....+|+++|+|+.+++.|++++...++ ..++++.++|+.+++.++++||+|+++.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL-----NDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc-----cCceEEEEcCHHHCCCCcccccEEEECc
Confidence 39999999999999999887333799999999999999999876543 3579999999999887778999999999
Q ss_pred hhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 239 CIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 239 ~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+++|++ +...+++++.++|+|||.+++.+...
T Consensus 120 ~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 120 SVFFWE--DVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp CGGGCS--CHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hHhhcc--CHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 999997 77799999999999999999987553
No 27
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.76 E-value=3.1e-18 Score=143.64 Aligned_cols=102 Identities=23% Similarity=0.406 Sum_probs=90.6
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++. ++.+..+|+.+++ .+++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------------~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL------------GRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH------------TSCCEECCGGGCC-CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc------------CCceEEeeeccCC-CCCcEEEEE
Confidence 3567999999999999999998865 6999999999999999886 2566788888887 558999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++.+++|++++++..+++++.++|||||++++....
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999999999888999999999999999999998554
No 28
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.76 E-value=2.3e-18 Score=150.32 Aligned_cols=120 Identities=26% Similarity=0.308 Sum_probs=101.0
Q ss_pred HHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEE
Q 023562 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (280)
Q Consensus 140 ~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~ 218 (280)
..+..++..... ..++.+|||+|||+|.++..+++.++ .+|+++|+|+.+++.|++++...+. .++++..
T Consensus 23 ~~l~~~l~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~ 93 (276)
T 3mgg_A 23 ETLEKLLHHDTV---YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI------KNVKFLQ 93 (276)
T ss_dssp CHHHHHHHTTCC---CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEE
T ss_pred HHHHHHHhhccc---CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEE
Confidence 345555544332 45678999999999999999998853 3899999999999999999876433 3699999
Q ss_pred ccCCCCCCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 219 VPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 219 ~d~~~~~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.|+.+++.++++||+|+++.+++|++ +...+++++.++|||||++++.+.
T Consensus 94 ~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 94 ANIFSLPFEDSSFDHIFVCFVLEHLQ--SPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp CCGGGCCSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccCCCCCCCeeEEEEechhhhcC--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99999887778999999999999998 556999999999999999999874
No 29
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.76 E-value=2.8e-18 Score=146.52 Aligned_cols=101 Identities=23% Similarity=0.274 Sum_probs=89.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++... ++++.++|+.++. ++++||+|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~----------~v~~~~~d~~~~~-~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD----------GITYIHSRFEDAQ-LPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS----------CEEEEESCGGGCC-CSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC----------CeEEEEccHHHcC-cCCcccEEEE
Confidence 457899999999999999987766 699999999999999998642 5899999998874 4589999999
Q ss_pred cchhhcCChhhHHHHHHHHH-HcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAK-VGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~-r~LkpGG~lii~e~~ 271 (280)
..+++|++ +...+++++. ++|||||++++.+..
T Consensus 110 ~~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 110 THVLEHID--DPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp ESCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 99999998 5679999999 999999999998754
No 30
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=4.5e-18 Score=140.71 Aligned_cols=110 Identities=20% Similarity=0.241 Sum_probs=95.9
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++...++ .++++..+|+.+++. +++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~-~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL------DNLHTRVVDLNNLTF-DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECCGGGCCC-CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC------CCcEEEEcchhhCCC-CCCceEEE
Confidence 3567999999999999999998855 699999999999999998765422 368999999988876 68999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
++.+++|+++++...+++++.++|+|||.+++.+....
T Consensus 103 ~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (199)
T 2xvm_A 103 STVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDT 140 (199)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCC
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeecc
Confidence 99999999988889999999999999999988876543
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.75 E-value=6.4e-18 Score=146.94 Aligned_cols=109 Identities=20% Similarity=0.247 Sum_probs=95.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++....+|+++|+|+.|++.|++++...++ ..++++.++|+.+++.++++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL-----QNRVTGIVGSMDDLPFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC-----CcCcEEEEcChhhCCCCCCCEEEE
Confidence 456789999999999999999887544899999999999999999876544 456999999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++..+++|++ ...+++++.++|||||++++.+..
T Consensus 119 ~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 119 WSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEee
Confidence 9999999983 568999999999999999999765
No 32
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.75 E-value=5.3e-18 Score=144.61 Aligned_cols=109 Identities=17% Similarity=0.065 Sum_probs=94.8
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++....+. ..++++.++|+.++++. ++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPK-----AEYFSFVKEDVFTWRPT-ELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGG-----GGGEEEECCCTTTCCCS-SCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCC-----CcceEEEECchhcCCCC-CCeeEEEE
Confidence 346999999999999998876554 699999999999999999876322 35799999999998754 69999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+.+++|+++++...+++++.++|||||.+++.+...
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 999999998889999999999999999999987643
No 33
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.75 E-value=2.1e-18 Score=151.39 Aligned_cols=106 Identities=23% Similarity=0.290 Sum_probs=93.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|++++...++ ..+++++++|+.+++ ..+++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGV-----SDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CC-----GGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-----CcceEEEEcCHHHhhhhcCCCceEEE
Confidence 367999999999999999998855 699999999999999999876543 467999999999886 5568999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+..+++|++ +...+++++.++|||||++++.+.
T Consensus 142 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 142 FHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 999999998 667999999999999999999864
No 34
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.75 E-value=3.6e-18 Score=146.34 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=96.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.+++++...++ .++++.++|++++++++++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV------ENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC------CSEEEEECBTTBCCSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC------CCeEEEecccccCCCCCCcEEEE
Confidence 45678999999999999999887765 799999999999999998765432 36899999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++..+++|++ +...+++++.++|||||++++.++..
T Consensus 92 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 92 TCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 9999999998 67799999999999999999987764
No 35
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=1.2e-17 Score=140.66 Aligned_cols=111 Identities=15% Similarity=0.188 Sum_probs=97.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-C-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..+++.+ . .+|+++|+|+.|++.+++++...++ .++++.++|+.+++.++++||
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD 108 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------KNVEVLKSEENKIPLPDNTVD 108 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECBTTBCSSCSSCEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEecccccCCCCCCCee
Confidence 4466799999999999999999886 2 3799999999999999999866433 369999999999887778999
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
+|+++.+++|++ +...+++++.++|+|||.+++.++...
T Consensus 109 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 109 FIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 999999999998 677999999999999999999987643
No 36
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.74 E-value=6.3e-18 Score=141.18 Aligned_cols=110 Identities=17% Similarity=0.150 Sum_probs=92.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|..+..++.....+|+++|+|+.|++.|+++.... ..++++.++|+.+++.++++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------NFKLNISKGDIRKLPFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH-------TCCCCEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEECchhhCCCCCCceeEEE
Confidence 356799999999999844444343347999999999999999987643 2468899999999887678999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+..+++|++.++...+++++.++|||||++++.++..
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 9999999987789999999999999999999987654
No 37
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=1.5e-17 Score=140.48 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=93.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +++++|+|+.+++.|+++.... ..++++.++|+.+++.++++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR-------ESNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-------CCCceEEECchhcCCCCCCcEEEEEE
Confidence 367999999999999998888776 7999999999999999987653 25689999999988766689999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+.++++...++...+++++.++|+|||.+++.+..
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 99966666668889999999999999999998654
No 38
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=7.5e-18 Score=144.48 Aligned_cols=108 Identities=17% Similarity=0.035 Sum_probs=93.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC-----C
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~ 229 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++... .++++.++|+.+++... .
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA---------ANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC---------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc---------cCceEEECccccccccccccccc
Confidence 34667999999999999999998877 699999999999999998743 47899999998864321 2
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+||+|+++.+++|+++++...+++++.++|||||++++.+...
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 4999999999999998889999999999999999999988754
No 39
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.74 E-value=1.3e-17 Score=144.50 Aligned_cols=105 Identities=21% Similarity=0.290 Sum_probs=92.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++.. +++++++|+.+++. +++||+|++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP-----------DAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC-----------CCEEEECChHHCCc-cCCcCEEEE
Confidence 457999999999999999987765 69999999999999999863 48899999999877 589999999
Q ss_pred cc-hhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 237 QW-CIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 237 ~~-~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
.. +++|+++ +++..+++++.++|||||++++.++....
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 98 9999965 57789999999999999999998665444
No 40
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=6.8e-18 Score=144.10 Aligned_cols=104 Identities=19% Similarity=0.279 Sum_probs=92.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|+++... .++++.++|+.+++.++++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---------TGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---------SSEEEEECCGGGCCCCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---------CCceEEEcChhhccCCCCCceEEE
Confidence 45679999999999999999988664799999999999999998754 368999999988877668999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+..+++|++ +...+++++.++|+|||.+++...
T Consensus 113 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 113 SSLALHYVE--DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Eeccccccc--hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 999999998 677999999999999999999753
No 41
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.74 E-value=1.2e-17 Score=139.90 Aligned_cols=99 Identities=18% Similarity=0.231 Sum_probs=87.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+ +..+++++|+|+.|++.++++. .++++.++|+.+++.++++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 5679999999999999876 4437999999999999999986 2478899999988877789999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
..+++|++ +...+++++.++|||||.+++.+..
T Consensus 102 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 102 FTTLEFVE--DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp ESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 99999998 6779999999999999999998654
No 42
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.74 E-value=1.3e-17 Score=148.61 Aligned_cols=112 Identities=14% Similarity=0.086 Sum_probs=98.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..++++...+|+++|+|+.|++.|++++...++ ..++++.++|+.++++++++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI-----DDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhcCCCCCCCEeEE
Confidence 456789999999999999999988444799999999999999999877544 457999999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
++..+++|++ ...+++++.++|||||++++.+.+...
T Consensus 190 ~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 190 WNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp EEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred EECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 9999999984 679999999999999999999876544
No 43
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.74 E-value=2e-18 Score=148.03 Aligned_cols=105 Identities=18% Similarity=0.125 Sum_probs=87.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC--CCCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fDl 233 (280)
.++.+|||||||+|..+..+++..+.++++||+|+.|++.|+++.... ..++.++.+|..+. ..++++||.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhC-------CCceEEEeehHHhhcccccccCCce
Confidence 467899999999999999888776668999999999999999998765 45688888887654 345678999
Q ss_pred EEc-----cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 234 IWV-----QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 234 V~~-----~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+. ..+++|+. +...+++++.|+|||||+|++.+
T Consensus 132 i~~D~~~~~~~~~~~~--~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 132 ILYDTYPLSEETWHTH--QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTH--HHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEEeeeecccchhhhc--chhhhhhhhhheeCCCCEEEEEe
Confidence 974 45666766 77899999999999999998864
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.74 E-value=1.5e-17 Score=146.14 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=94.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..+++... .+|+++|+|+.|++.|++++... +.++++.++|+.+++.+ ++||
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~v~~~~~d~~~~~~~-~~fD 91 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-------PYDSEFLEGDATEIELN-DKYD 91 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-------SSEEEEEESCTTTCCCS-SCEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcchhhcCcC-CCee
Confidence 45678999999999999999987744 37999999999999999997653 34799999999998775 7999
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|++..+++|++ +...+++++.++|||||++++.+..
T Consensus 92 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999998 6679999999999999999998765
No 45
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.74 E-value=1e-17 Score=147.09 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=96.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|++++...+ .++++.++|+.+++. +++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKEN-------LNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcC-------CceEEEEeccccccc-cCCccEEEE
Confidence 567999999999999999998866 69999999999999999987642 378999999998776 589999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
+.+++|++++++..+++++.++|+|||.+++...+..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 227 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMST 227 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCC
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 9999999988899999999999999999888765543
No 46
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=4.8e-18 Score=145.24 Aligned_cols=108 Identities=17% Similarity=0.141 Sum_probs=87.9
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC--CCCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fDl 233 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|+++.... ..++.++++|+.++ ++++++||+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc-------CCCeEEEecCHHHhhcccCCCceEE
Confidence 356799999999999999887655558999999999999999988654 35689999999887 666789999
Q ss_pred EEc-cchh--hcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWV-QWCI--GHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~-~~~l--~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|++ .+.+ +.....+...+++++.++|||||+|++.+.
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 999 5543 222234566889999999999999998753
No 47
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.73 E-value=8.7e-18 Score=145.10 Aligned_cols=104 Identities=20% Similarity=0.250 Sum_probs=91.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.+++++... ..++++..+|+.+++.++++||+|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGV-------DRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTS-------CTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcc-------CCceEEEEcccccCCCCCCCeeEE
Confidence 34667999999999999999987754 6999999999999999987221 357999999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
++..+++|++ +...+++++.++|||||++++.
T Consensus 109 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 9999999998 6779999999999999999987
No 48
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.73 E-value=7.5e-18 Score=146.49 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=85.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++++. +|+++|+|+.|++.|++++... ....++...+.......+++||+|
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 45678999999999999999998876 6999999999999999998652 122223222220011113689999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+++.+++|+..++...+++++.++| |||.++++-..
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 9999999999888999999999999 99999998543
No 49
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.72 E-value=1.8e-17 Score=145.74 Aligned_cols=110 Identities=17% Similarity=0.125 Sum_probs=94.9
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-CCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fDlV 234 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++...+. ..++++.++|+.+.+. .+++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR-----RFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC-----SSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CccEEEEECCccccccCCCCCcCEE
Confidence 45679999999999999988877665899999999999999999876433 3568999999998876 46899999
Q ss_pred Eccchhhc--CChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 235 WVQWCIGH--LTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 235 ~~~~~l~~--~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++..+++| ...++...+++++.++|||||++++...
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999988 5556888999999999999999999854
No 50
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.72 E-value=1.5e-17 Score=142.43 Aligned_cols=101 Identities=12% Similarity=0.126 Sum_probs=88.5
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC--CCCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fDl 233 (280)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++ +++..+|+.++ ++++++||+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------------~~~~~~d~~~~~~~~~~~~fD~ 104 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK--------------FNVVKSDAIEYLKSLPDKYLDG 104 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT--------------SEEECSCHHHHHHTSCTTCBSE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh--------------cceeeccHHHHhhhcCCCCeeE
Confidence 4568999999999999999988866 599999999999999865 45677887765 555689999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|++..+++|++++++..+++++.++|||||++++....
T Consensus 105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99999999999888899999999999999999998654
No 51
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.72 E-value=5.8e-18 Score=148.95 Aligned_cols=122 Identities=19% Similarity=0.227 Sum_probs=96.6
Q ss_pred HHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEE
Q 023562 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (280)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~ 218 (280)
..++...+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++....+. .....++.+..
T Consensus 46 ~~~l~~~l~-------~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~~~~ 115 (293)
T 3thr_A 46 KAWLLGLLR-------QHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRK--EPAFDKWVIEE 115 (293)
T ss_dssp HHHHHHHHH-------HTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTT--SHHHHTCEEEE
T ss_pred HHHHHHHhc-------ccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhccc--ccccceeeEee
Confidence 345555554 23567999999999999999998876 699999999999999987632211 00024678888
Q ss_pred ccCCCCC---CCCCcEEEEEcc-chhhcCCh-----hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 219 VPLQDFT---PETGRYDVIWVQ-WCIGHLTD-----DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 219 ~d~~~~~---~~~~~fDlV~~~-~~l~~~~~-----~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+|+.+++ +.+++||+|++. .+++|+++ +++..+++++.++|||||++++..+
T Consensus 116 ~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 116 ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9987766 556899999998 89999996 5588999999999999999998753
No 52
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.71 E-value=6.4e-17 Score=137.04 Aligned_cols=114 Identities=18% Similarity=0.197 Sum_probs=96.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....++... ...++++.++|+.+++..+++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQK-TGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSS-SSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccc-cCcceEEEEecccccCCCCCceeEEEE
Confidence 567999999999999999998855 699999999999999999877543211 123689999999998877789999999
Q ss_pred cchhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 237 QWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 237 ~~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+.+++|+++ .+...+++++.++|||||.+++.+...
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 999999974 335689999999999999999987643
No 53
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.71 E-value=3.9e-17 Score=144.39 Aligned_cols=109 Identities=25% Similarity=0.362 Sum_probs=92.0
Q ss_pred CccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEcc
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~ 237 (280)
+.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|++++...+. ....+++++++|+.++++ +++||+|++.
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~v~~~~~d~~~~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPA---DVRDRCTLVQGDMSAFAL-DKRFGTVVIS 157 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCH---HHHTTEEEEECBTTBCCC-SCCEEEEEEC
T ss_pred CCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhccc---ccccceEEEeCchhcCCc-CCCcCEEEEC
Confidence 45999999999999999998865 599999999999999999876421 001569999999999877 4899999865
Q ss_pred -chhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 238 -WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 238 -~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
.+++|+++++...+++++.++|||||+|++....
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 158 SGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 7788888778899999999999999999997543
No 54
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.71 E-value=4.5e-17 Score=144.02 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=90.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHcCcC-CCCCCCCCcceeEEEccCCCCCCCC----
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPET---- 228 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~--~~~v~~vD~S~~~l~~A~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~---- 228 (280)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.|++.|++++... +. ..+++|+++|+.+++..+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-----YKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-----CTTEEEEECCTTCCGGGCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-----CCceEEEEcCHHhCCccccccc
Confidence 367899999999999999999743 458999999999999999987653 11 357999999999987655
Q ss_pred --CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 229 --GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 229 --~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
++||+|+++.+++|+ ++..+++++.++|||||.|++.
T Consensus 110 ~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEE
Confidence 799999999999999 5679999999999999999984
No 55
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=1.8e-17 Score=142.64 Aligned_cols=117 Identities=21% Similarity=0.321 Sum_probs=95.8
Q ss_pred HHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc
Q 023562 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (280)
Q Consensus 140 ~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~ 219 (280)
.++..++... . ..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++.... ..++++.++
T Consensus 28 ~~~~~~~~~~-~---~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~~ 95 (252)
T 1wzn_A 28 DFVEEIFKED-A---KREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKER-------NLKIEFLQG 95 (252)
T ss_dssp HHHHHHHHHT-C---SSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCCEEEES
T ss_pred HHHHHHHHHh-c---ccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhc-------CCceEEEEC
Confidence 4556655432 1 34567999999999999999998865 6999999999999999987653 236899999
Q ss_pred cCCCCCCCCCcEEEEEcc-chhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 220 PLQDFTPETGRYDVIWVQ-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 220 d~~~~~~~~~~fDlV~~~-~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+.+++.+ ++||+|++. ..++|++.++...+++++.++|+|||.+++.-
T Consensus 96 d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 96 DVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 99887765 689999987 45677777788999999999999999998863
No 56
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.71 E-value=7.5e-18 Score=146.65 Aligned_cols=133 Identities=16% Similarity=0.078 Sum_probs=95.6
Q ss_pred HHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCC--CC--------
Q 023562 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM--AP-------- 208 (280)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~--~~-------- 208 (280)
..++...+.+.+.. ...++.+|||||||+|.++..++..++.+|+++|+|+.|++.|++++...... +.
T Consensus 38 ~~~~~~~~~~~~~~-~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~ 116 (263)
T 2a14_A 38 LKFNLECLHKTFGP-GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACE 116 (263)
T ss_dssp HHHHHHHHHHHHST-TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHh
Confidence 34555555444321 14467899999999998887666677667999999999999999876542100 00
Q ss_pred --C-----------CCccee-EEEccCCCC-CC---CCCcEEEEEccchhhcCC--hhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 209 --D-----------MHKATN-FFCVPLQDF-TP---ETGRYDVIWVQWCIGHLT--DDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 209 --~-----------~~~~i~-~~~~d~~~~-~~---~~~~fDlV~~~~~l~~~~--~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
. ...++. ++++|+.+. +. ..++||+|++++++||+. .+++..++++++++|||||+|+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 117 LEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 0 001233 889998874 22 246899999999999863 257789999999999999999999
Q ss_pred eccC
Q 023562 269 ENIA 272 (280)
Q Consensus 269 e~~~ 272 (280)
+.+.
T Consensus 197 ~~~~ 200 (263)
T 2a14_A 197 VTLR 200 (263)
T ss_dssp EESS
T ss_pred Eeec
Confidence 7543
No 57
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=9.5e-17 Score=138.35 Aligned_cols=102 Identities=22% Similarity=0.329 Sum_probs=90.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..+++.. ..+|+++|+|+.|++.++++. .++++..+|+.+++ .+++||+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----------PNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------TTSEEEECCTTTCC-CSSCEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------CCcEEEECChhhcC-ccCCcCE
Confidence 4567899999999999999998874 237999999999999999883 35889999999887 5689999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|+++.+++|++ +...+++++.++|||||++++.++
T Consensus 99 v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 99 LYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 99999999997 677999999999999999999865
No 58
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.70 E-value=7.2e-17 Score=134.21 Aligned_cols=105 Identities=24% Similarity=0.234 Sum_probs=89.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++ +|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++.... ..++.+.++|+.+++.++++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEK-------GVKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHH-------TCCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcChhhcCCCcCCccEEEE
Confidence 44 999999999999998887765 6999999999999999987653 23689999999988766689999998
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+ +.|++.++...+++++.++|+|||.+++.+...
T Consensus 101 ~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 101 I--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp E--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred E--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 5 346666788999999999999999999987653
No 59
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.70 E-value=2.5e-17 Score=140.54 Aligned_cols=115 Identities=21% Similarity=0.348 Sum_probs=95.5
Q ss_pred HHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc
Q 023562 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (280)
Q Consensus 140 ~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~ 219 (280)
.++...+... ..++.+|||+|||+|.++..+++.+. +++++|+|+.|++.|+++.... ..++++.++
T Consensus 25 ~~~~~~l~~~-----~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~-------~~~~~~~~~ 91 (246)
T 1y8c_A 25 DFIIEKCVEN-----NLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQ-------GLKPRLACQ 91 (246)
T ss_dssp HHHHHHHHTT-----TCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHT-------TCCCEEECC
T ss_pred HHHHHHHHHh-----CCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhc-------CCCeEEEec
Confidence 4555555432 12567999999999999999987765 6999999999999999987653 226899999
Q ss_pred cCCCCCCCCCcEEEEEccc-hhhcCCh-hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 220 PLQDFTPETGRYDVIWVQW-CIGHLTD-DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 220 d~~~~~~~~~~fDlV~~~~-~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|+.+++.+ ++||+|++.. +++|+++ ++...+++++.++|+|||++++.
T Consensus 92 d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 92 DISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99888766 7999999998 9999943 57889999999999999999985
No 60
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.70 E-value=1.7e-17 Score=147.47 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=85.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCC------CC--CCCC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ------DF--TPET 228 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~------~~--~~~~ 228 (280)
++.+|||+|||+|..+..++..+..+|+|+|+|+.||+.|+++....+........+++|.+.|+. ++ +.++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 467999999999987766776665679999999999999999875432100000013678888772 22 1345
Q ss_pred CcEEEEEccchhhcC-ChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 229 GRYDVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++||+|+|.+++||+ .+++...++++++++|||||+++++..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 799999999999986 334678999999999999999999754
No 61
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=6.4e-17 Score=132.77 Aligned_cols=122 Identities=11% Similarity=0.022 Sum_probs=90.8
Q ss_pred HHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEE
Q 023562 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (280)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~ 218 (280)
..+...++... ..++.+|||+|||+|.++..+++. ..+|+++|+|+.|++.|++++...++ .++++++
T Consensus 9 ~~~~~~~l~~~-----~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~ 76 (185)
T 3mti_A 9 IHMSHDFLAEV-----LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI------ENTELIL 76 (185)
T ss_dssp HHHHHHHHHTT-----CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC------CCEEEEE
T ss_pred HHHHHHHHHHh-----CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEe
Confidence 34555555543 346789999999999999999877 44799999999999999999876432 4688998
Q ss_pred ccCCCCC-CCCCcEEEEEccchhhcC-------ChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 219 VPLQDFT-PETGRYDVIWVQWCIGHL-------TDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 219 ~d~~~~~-~~~~~fDlV~~~~~l~~~-------~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
.+..++. ..+++||+|+++....+. ...+...+++++.++|||||.+++..+..
T Consensus 77 ~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 77 DGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp SCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 8877643 235789999987432221 22456789999999999999999986643
No 62
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.70 E-value=2e-17 Score=151.61 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=94.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCC--CCCCCcceeEEEccCCCC------C
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHM--APDMHKATNFFCVPLQDF------T 225 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~--~~~~~~~i~~~~~d~~~~------~ 225 (280)
.++.+|||+|||+|.++..+++... .+|+++|+|+.|++.|++++...... ......+++|+++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 4667999999999999999988742 27999999999999999986432000 000025799999999987 6
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+++++||+|+++.+++|++ +...+++++.++|||||++++.+...
T Consensus 162 ~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 6678999999999999998 67799999999999999999987654
No 63
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=2.5e-17 Score=142.92 Aligned_cols=101 Identities=18% Similarity=0.144 Sum_probs=88.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++. +++|.++|+++++.++++||+|
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------------~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP------------QVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT------------TEEEECCCTTSCCSCTTCBSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc------------CCEEEECchhhCCCCCCCEeEE
Confidence 34678999999999999999987654 6999999999998775542 6899999999988777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++..+++|++ +...+++++.++|| ||++++.+..
T Consensus 99 ~~~~~l~~~~--~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 99 ISILAIHHFS--HLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp EEESCGGGCS--SHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred EEcchHhhcc--CHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 9999999997 77899999999999 9988887654
No 64
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.70 E-value=5.2e-17 Score=143.53 Aligned_cols=113 Identities=20% Similarity=0.276 Sum_probs=90.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCC-----------------------------
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHM----------------------------- 206 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~----------------------------- 206 (280)
++.+|||+|||+|.++..++.... .+|+|+|+|+.|++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 567999999999999999998843 48999999999999999987653311
Q ss_pred -----------------------CCCCCcceeEEEccCCCCC-----CCCCcEEEEEccchhhcC----ChhhHHHHHHH
Q 023562 207 -----------------------APDMHKATNFFCVPLQDFT-----PETGRYDVIWVQWCIGHL----TDDDFVSFFKR 254 (280)
Q Consensus 207 -----------------------~~~~~~~i~~~~~d~~~~~-----~~~~~fDlV~~~~~l~~~----~~~d~~~~l~~ 254 (280)
...+..+++|.++|+.... ..+++||+|+|..+++|+ +++++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0112257999999987654 345899999999999887 56688899999
Q ss_pred HHHcCCCCcEEEEEe
Q 023562 255 AKVGLKPGGFFVLKE 269 (280)
Q Consensus 255 ~~r~LkpGG~lii~e 269 (280)
++++|+|||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999863
No 65
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.70 E-value=2.4e-16 Score=134.09 Aligned_cols=105 Identities=18% Similarity=0.253 Sum_probs=90.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++.. ++++.++|+.+++. +++||+|+|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP-----------DATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT-----------TCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC-----------CCEEEECCHHHccc-CCCCcEEEE
Confidence 457999999999999999998876 69999999999999998852 47899999998876 579999995
Q ss_pred c-chhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 237 Q-WCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 237 ~-~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
. .+++|+.+ +++..+++++.++|+|||.+++.+.....
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 4 59999964 57889999999999999999998765543
No 66
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.69 E-value=1.5e-16 Score=130.71 Aligned_cols=102 Identities=20% Similarity=0.188 Sum_probs=90.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.. ++.+.++|+.+++.++++||+|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP-----------EARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTSCCCCCCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC-----------CCcEEEcccccCCCCCCceeEEEE
Confidence 567999999999999999988755 69999999999999999863 378899999988766689999999
Q ss_pred c-chhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 237 Q-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 237 ~-~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+ .+++|+++++...+++++.++|+|||.+++...
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 8 789999878889999999999999999999754
No 67
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=1.1e-16 Score=139.97 Aligned_cols=102 Identities=19% Similarity=0.238 Sum_probs=89.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++. .++.+..+|+.+++++ ++||+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~-~~fD~v 121 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-----------PHLHFDVADARNFRVD-KPLDAV 121 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----------TTSCEEECCTTTCCCS-SCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-----------CCCEEEECChhhCCcC-CCcCEE
Confidence 34567999999999999999988544 6999999999999999875 2478999999998764 799999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+++.+++|++ +...+++++.++|||||++++..+.
T Consensus 122 ~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 122 FSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999999998 6779999999999999999998654
No 68
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.69 E-value=5.3e-17 Score=131.36 Aligned_cols=102 Identities=18% Similarity=0.129 Sum_probs=89.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. .++++..+| .+.++++||+|
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF-----------DSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC-----------TTSEEESSG---GGSCTTCEEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC-----------CCcEEEeCC---CCCCCCceEEE
Confidence 34667999999999999999988776 7999999999999999982 358888888 44556799999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
+++.+++|++ +...+++++.++|||||.+++.+....
T Consensus 80 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 80 LFANSFHDMD--DKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp EEESCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEccchhccc--CHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 9999999997 677999999999999999999987654
No 69
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.69 E-value=2.1e-16 Score=143.87 Aligned_cols=111 Identities=14% Similarity=0.218 Sum_probs=97.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC--CCCCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fDl 233 (280)
.+.+|||||||+|.++..++++++. +++++|+ +.|++.|++++...++ ..+++|..+|+.+. +.+ ++||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG-----SERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT-----GGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc-----ccceEEEEccccccCCCCC-CCcCE
Confidence 4579999999999999999987655 8999999 9999999999876543 45799999999886 344 78999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
|++.+++|++++++...++++++++|||||++++.|.+...
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 99999999999888899999999999999999999987643
No 70
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.68 E-value=9.8e-17 Score=142.37 Aligned_cols=112 Identities=16% Similarity=0.031 Sum_probs=94.3
Q ss_pred CCCCccEEEeecCccHHHHHHH-Hhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLL-IRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~-~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..++ ... ..+|+++|+|+.|++.|++++...++ ..+++++++|+.+++++ ++||
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD 189 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL-----AGQITLHRQDAWKLDTR-EGYD 189 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEECCGGGCCCC-SCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECchhcCCcc-CCeE
Confidence 3467899999999999999885 233 23899999999999999999987644 45699999999998876 8999
Q ss_pred EEEccchhhcCChh-hHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 233 VIWVQWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 233 lV~~~~~l~~~~~~-d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+|+++.+++|++++ ....+++++.++|||||++++.+...
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 190 LLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 99999999999743 33568999999999999999987654
No 71
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.68 E-value=2.9e-16 Score=137.59 Aligned_cols=107 Identities=19% Similarity=0.170 Sum_probs=90.0
Q ss_pred CccEEEeecCc---cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--------
Q 023562 158 HLVALDCGSGI---GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (280)
Q Consensus 158 ~~~VLDlGcG~---G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------- 225 (280)
..+|||||||+ |.++..+.+.... +|+++|+|+.|++.|++++.. ..+++|+++|+.+..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--------~~~v~~~~~D~~~~~~~~~~~~~ 149 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--------DPNTAVFTADVRDPEYILNHPDV 149 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--------CTTEEEEECCTTCHHHHHHSHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--------CCCeEEEEeeCCCchhhhccchh
Confidence 46899999999 9888766555433 799999999999999999854 356999999997631
Q ss_pred ---CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 226 ---PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 226 ---~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++..+||+|+++.++||+++++...+++++.++|+|||+|++++...
T Consensus 150 ~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 150 RRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 22248999999999999997778999999999999999999998764
No 72
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=2e-16 Score=134.96 Aligned_cols=102 Identities=22% Similarity=0.274 Sum_probs=88.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++. .+|+++|+|+.|++.|+++.... ..++++.++|+.+++.+ ++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMET-------NRHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhc-------CCceEEEEcChhhcCCC-CCcCEEEE
Confidence 4579999999999999988876 57999999999999999987653 24689999999888765 79999999
Q ss_pred cc-hhhcC-ChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 237 QW-CIGHL-TDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 237 ~~-~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.. +++|+ +.++...+++++.++|+|||.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 86 99998 4467889999999999999999984
No 73
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.67 E-value=1e-16 Score=141.39 Aligned_cols=110 Identities=16% Similarity=0.199 Sum_probs=81.6
Q ss_pred CCCccEEEeecCccHHHHHHH----HhcCC-c--EEEEeCCHHHHHHHHHHcCcC-CCCCCCCCcceeEEEccCCCCC--
Q 023562 156 NQHLVALDCGSGIGRITKNLL----IRYFN-E--VDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFT-- 225 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~----~~~~~-~--v~~vD~S~~~l~~A~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~-- 225 (280)
.++.+|||||||+|.++..++ .++.. . ++++|+|+.|++.|++++... ++ ...+..+..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~----~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL----ENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC----TTEEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC----CcceEEEEecchhhhhhh
Confidence 456799999999998765443 33332 2 399999999999999987542 11 0112344455554432
Q ss_pred ----CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 226 ----~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+++++||+|++..+++|++ ++..+++++.++|||||++++.+..
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 3457999999999999999 6779999999999999999998643
No 74
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.66 E-value=5.5e-16 Score=139.10 Aligned_cols=112 Identities=15% Similarity=0.120 Sum_probs=95.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..+..+|||+|||+|.++..+++.++. +++++|+ +.+++.|++++...++ ..+++|..+|+.+ +.+ .+||+
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~p-~~~D~ 238 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL-----SGRAQVVVGSFFD-PLP-AGAGG 238 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCC-CSCSE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc-----CcCeEEecCCCCC-CCC-CCCcE
Confidence 345679999999999999999987665 7999999 9999999998876443 4679999999973 333 38999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
|++.+++||+++++...++++++++|+|||++++.|.+...
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 99999999999887899999999999999999999987654
No 75
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.66 E-value=8e-17 Score=139.18 Aligned_cols=116 Identities=17% Similarity=0.225 Sum_probs=91.2
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCC--------------CCC---------CCc
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM--------------APD---------MHK 212 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~--------------~~~---------~~~ 212 (280)
.++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...+.. ... ...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 456799999999999999888776657999999999999999988653100 000 001
Q ss_pred ce-eEEEccCCCCCC-CC---CcEEEEEccchhhcCCh--hhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 213 AT-NFFCVPLQDFTP-ET---GRYDVIWVQWCIGHLTD--DDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 213 ~i-~~~~~d~~~~~~-~~---~~fDlV~~~~~l~~~~~--~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++ ++..+|+.+..+ .+ ++||+|+++.+++|+.+ +++..+++++.++|||||++++.+..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 26 899999988643 44 78999999999996544 37889999999999999999998754
No 76
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.65 E-value=1.6e-16 Score=139.86 Aligned_cols=115 Identities=14% Similarity=0.182 Sum_probs=84.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCC------------CC------------CCc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMA------------PD------------MHK 212 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~------------~~------------~~~ 212 (280)
++.+|||+|||+|..+..++.....+|+++|+|+.|++.|++++....... .. ...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 567999999999996553333344589999999999999998765321000 00 000
Q ss_pred ceeEEEccCCC-CCC-----CCCcEEEEEccchhhcCChh--hHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 213 ATNFFCVPLQD-FTP-----ETGRYDVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 213 ~i~~~~~d~~~-~~~-----~~~~fDlV~~~~~l~~~~~~--d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
.++++.+|+.+ +++ ++++||+|+++++++|+.++ ++..+++++.++|||||+|++.+..
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 14567778877 442 23579999999999996543 7889999999999999999998543
No 77
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=2.5e-16 Score=129.97 Aligned_cols=109 Identities=13% Similarity=0.047 Sum_probs=91.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fDl 233 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++...++ .+++++++|+.++. .++++||+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL------SGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC------SCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC------CceEEEEccHHHHHhhccCCCccE
Confidence 35679999999999999988887776899999999999999999876532 46899999988763 33579999
Q ss_pred EEccchhhcCChhhHHHHHHHHHH--cCCCCcEEEEEecc
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKENI 271 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r--~LkpGG~lii~e~~ 271 (280)
|+++..+++. .+++..+++.+.+ +|+|||++++....
T Consensus 117 i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 117 VLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 9999887664 2477899999999 99999999997543
No 78
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.64 E-value=1.6e-15 Score=138.35 Aligned_cols=112 Identities=21% Similarity=0.297 Sum_probs=96.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..+..+|||+|||+|.++..++++++. +++++|+ +.+++.|++++...++ ..+++|..+|+.+ +.+ .+||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l-----~~~v~~~~~d~~~-~~p-~~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL-----ADRCEILPGDFFE-TIP-DGADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTT-CCC-SSCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc-----CCceEEeccCCCC-CCC-CCceE
Confidence 445689999999999999999988655 7999999 9999999998876543 4679999999973 333 38999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
|++.+++|++++++...++++++++|+|||++++.|.+...
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999887789999999999999999999987654
No 79
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.64 E-value=6.3e-16 Score=138.51 Aligned_cols=112 Identities=15% Similarity=0.147 Sum_probs=96.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.++.+|||+|||+|.++..+++.... +++++|+| .+++.|++++...++ ..++++..+|+.+.+.+ ..||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV-----ASRYHTIAGSAFEVDYG-NDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC-----GGGEEEEESCTTTSCCC-SCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC-----CcceEEEecccccCCCC-CCCcEE
Confidence 45679999999999999999988543 79999999 999999998765433 34699999999876655 459999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
++.+++||+++++...+++++.++|+|||++++.|.+...
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 9999999999888899999999999999999999987643
No 80
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.64 E-value=5.4e-16 Score=140.13 Aligned_cols=110 Identities=20% Similarity=0.254 Sum_probs=96.3
Q ss_pred CccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCcEEEE
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVI 234 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fDlV 234 (280)
+.+|||+|||+|.++..+++.++. +++++|+ +.+++.+++++...++ ..++++..+|+.+.+ ++ +.||+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~-~~~D~v 252 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL-----GGRVEFFEKNLLDARNFEG-GAADVV 252 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----GGGEEEEECCTTCGGGGTT-CCEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC-----CCceEEEeCCcccCcccCC-CCccEE
Confidence 689999999999999999988655 8999999 8899999998776433 457999999998865 33 679999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
++.+++||+++++...+++++.++|+|||++++.|.+...
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 253 MLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred EEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999888899999999999999999999987543
No 81
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.64 E-value=2.5e-16 Score=142.28 Aligned_cols=214 Identities=15% Similarity=0.172 Sum_probs=132.8
Q ss_pred CCcceeeeehhhHHHHHHHHhhhccCCCCCCCcccccccccCCCcccccHHHHHHHhhcCCcccch-hhh--HHHH----
Q 023562 35 KPTLHLLHVGRRKEKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQE-KKT--QWYR---- 107 (280)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~w~~~l~~~~~~~~-~~~--~~y~---- 107 (280)
....-++.+|+.+..++...+.+...- +....+...|....| ..++.++....... .+.. ..+ .++.
T Consensus 76 ~~~~~~~~~pk~~~~~~~~l~~~~~~~--~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~ 149 (343)
T 2pjd_A 76 DCDTLIYYWPKNKPEAQFQLMNLLSLL--PVGTDIFVVGENRSG--VRSAEQMLADYAPL--NKVDSARRCGLYFGRLEK 149 (343)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHHTTS--CTTCEEEEEEEGGGT--GGGHHHHHTTTSCC--EEECCCTTEEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHHhC--CCCCEEEEEEecCCC--HHhHHHHHHHhcCc--chhhhhhcceeEEeeccc
Confidence 456678999999999998887766632 112334455655555 45566655543211 1100 000 0000
Q ss_pred ----HHHhhhhcccccccccccCcccccc-ccccchHHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCC-
Q 023562 108 ----EGISYWEGVEASVDGVLGGFGNVNE-VDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN- 181 (280)
Q Consensus 108 ----~~~~yW~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~- 181 (280)
....||..... .+..+.....++. ..+......+...+. ...+.+|||+|||+|.++..+++.+..
T Consensus 150 ~~~~~~~~~~~~y~~-~~~~~~~~~gvf~~~~~d~~~~~ll~~l~-------~~~~~~VLDlGcG~G~~~~~la~~~~~~ 221 (343)
T 2pjd_A 150 QPVFDAEKFWGEYSV-DGLTVKTLPGVFSRDGLDVGSQLLLSTLT-------PHTKGKVLDVGCGAGVLSVAFARHSPKI 221 (343)
T ss_dssp CCCCCGGGGCEEEEE-TTEEEEECTTCTTSSSCCHHHHHHHHHSC-------TTCCSBCCBTTCTTSHHHHHHHHHCTTC
T ss_pred CCCCCchhhcceeec-cceEEEecCCccCCCCCcHHHHHHHHhcC-------cCCCCeEEEecCccCHHHHHHHHHCCCC
Confidence 01122221110 0000001111111 122222344444332 224568999999999999999988764
Q ss_pred cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccchhhcC---ChhhHHHHHHHHHHc
Q 023562 182 EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHL---TDDDFVSFFKRAKVG 258 (280)
Q Consensus 182 ~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~~l~~~---~~~d~~~~l~~~~r~ 258 (280)
+|+++|+|+.|++.+++++...+ ..+++..+|+.+.. +++||+|+++.++|+. ..++...+++++.++
T Consensus 222 ~v~~vD~s~~~l~~a~~~~~~~~-------~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~ 292 (343)
T 2pjd_A 222 RLTLCDVSAPAVEASRATLAANG-------VEGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRH 292 (343)
T ss_dssp BCEEEESBHHHHHHHHHHHHHTT-------CCCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGG
T ss_pred EEEEEECCHHHHHHHHHHHHHhC-------CCCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHh
Confidence 89999999999999999987643 23677888887654 4799999999988762 334678999999999
Q ss_pred CCCCcEEEEEecc
Q 023562 259 LKPGGFFVLKENI 271 (280)
Q Consensus 259 LkpGG~lii~e~~ 271 (280)
|||||.+++..|.
T Consensus 293 LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 293 LNSGGELRIVANA 305 (343)
T ss_dssp EEEEEEEEEEEET
T ss_pred CCCCcEEEEEEcC
Confidence 9999999998764
No 82
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.64 E-value=7.4e-16 Score=133.47 Aligned_cols=100 Identities=23% Similarity=0.322 Sum_probs=85.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++... .+.++|+.+++.++++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~------------~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK------------NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS------------CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC------------CEEECcHHHCCCCCCCEEEEEE
Confidence 567999999999999999987755 699999999999999988641 2788999988877789999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
..++.|+.+ +...+++++.++|||||.+++...
T Consensus 121 ~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 121 LGDVLSYVE-NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSSHHHHCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhhccc-cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 887766632 478999999999999999998743
No 83
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.64 E-value=1.8e-15 Score=126.17 Aligned_cols=105 Identities=16% Similarity=0.139 Sum_probs=88.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.|++++...++ .++++.++|+.+.....++||+
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~ 111 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA------RNVTLVEAFAPEGLDDLPDPDR 111 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC------TTEEEEECCTTTTCTTSCCCSE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC------CcEEEEeCChhhhhhcCCCCCE
Confidence 45678999999999999999998863 3899999999999999998876432 4689999999765444468999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|++..+++ +...+++++.++|+|||.+++...
T Consensus 112 i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 112 VFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp EEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 99988764 566899999999999999999754
No 84
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.64 E-value=6.6e-16 Score=134.42 Aligned_cols=111 Identities=13% Similarity=-0.009 Sum_probs=91.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-C-CcEEEEeCCHH------HHHHHHHHcCcCCCCCCCCCcceeEEEcc-C--CC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSH------FLDAARESLAPENHMAPDMHKATNFFCVP-L--QD 223 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~-~~v~~vD~S~~------~l~~A~~~~~~~~~~~~~~~~~i~~~~~d-~--~~ 223 (280)
..++.+|||+|||+|.++..+++.+ . .+|+++|+|+. |++.|++++...++ ..++++..+| + ..
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----GDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----GGGEEEECSCCTTTCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----CCceEEEECChhhhcc
Confidence 4567899999999999999999885 3 47999999997 99999999876533 3579999998 3 33
Q ss_pred CCCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 224 ~~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+++++++||+|+++.+++|+++. ..+++.+.++++|||++++.+...
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCCCCCCEEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEEecC
Confidence 34456899999999999999854 468888888888899999988664
No 85
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.64 E-value=1.5e-15 Score=125.74 Aligned_cols=112 Identities=12% Similarity=-0.007 Sum_probs=89.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~f 231 (280)
..++.+|||+|||+|.++..+++... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+++ ..+++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----IDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----GGGEEEECSCGGGGGGTCCSCE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHhhhccCCc
Confidence 34567999999999999999988732 3799999999999999999877543 357999999988775 445799
Q ss_pred EEEEccchhh-------cCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 232 DVIWVQWCIG-------HLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 232 DlV~~~~~l~-------~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|+|+++..+. .....+...+++++.++|||||++++....
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 9999886541 111235567999999999999999998754
No 86
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.63 E-value=5.2e-16 Score=138.08 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=90.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCC-CCCCCcceeEEEccCCCCC----C--CCC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APDMHKATNFFCVPLQDFT----P--ETG 229 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~-~~~~~~~i~~~~~d~~~~~----~--~~~ 229 (280)
++.+|||+|||+|.++..+++....+|+++|+|+.|++.|+++....+.. ......++++.++|+.+++ + +++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 56799999999999999998765558999999999999999987532100 0000236899999998875 3 235
Q ss_pred cEEEEEccchhhcC--ChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 230 RYDVIWVQWCIGHL--TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 230 ~fDlV~~~~~l~~~--~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+||+|+++.++||+ +.++...+++++.++|||||+++++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 89999999999998 335678999999999999999999754
No 87
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.63 E-value=2.4e-15 Score=136.47 Aligned_cols=111 Identities=15% Similarity=0.192 Sum_probs=95.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..++++++. +++++|+ +.+++.|++++...++ ..++++..+|+.+.+.++ +|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~--~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV-----ADRMRGIAVDIYKESYPE--ADA 259 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----TTTEEEEECCTTTSCCCC--CSE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC-----CCCEEEEeCccccCCCCC--CCE
Confidence 446679999999999999999988654 7999999 9999999998876443 346999999998876543 499
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
|++..++||+++++...+++++.++|+|||++++.|.+..
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 9999999999987789999999999999999999997754
No 88
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.63 E-value=5.6e-16 Score=141.72 Aligned_cols=109 Identities=21% Similarity=0.213 Sum_probs=92.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+..+|+++|+| .|++.|++++...++ ..+++++++|+.+++.+ ++||+|
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~~D~I 133 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNL-----DHIVEVIEGSVEDISLP-EKVDVI 133 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTC-----TTTEEEEESCGGGCCCS-SCEEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCC-----CCeEEEEECchhhcCcC-CcceEE
Confidence 45678999999999999999998877689999999 999999999887654 45699999999998876 899999
Q ss_pred EccchhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 235 ~~~~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++..+.+++.. ..+..+++.+.++|||||++++.+.
T Consensus 134 v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 134 ISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 99765555432 3577899999999999999987643
No 89
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.63 E-value=2e-16 Score=133.11 Aligned_cols=99 Identities=23% Similarity=0.298 Sum_probs=82.2
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC---CCC-CCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE-TGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~-~~~fD 232 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++. ++.+...++.++ +.. ..+||
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------------~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAAG------------AGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHTC------------SSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhc------------ccccchhhHHhhcccccccCCCcc
Confidence 457999999999999999988755 6999999999999999871 256677776655 322 34699
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|+++.+++ .. +...+++++.++|||||++++.+..
T Consensus 119 ~v~~~~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 119 LICANFALL-HQ--DIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEEESCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECchhh-hh--hHHHHHHHHHHHhCCCeEEEEEecC
Confidence 999999998 44 6679999999999999999998764
No 90
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=1.2e-15 Score=123.99 Aligned_cols=105 Identities=17% Similarity=0.086 Sum_probs=84.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..+++... .+|+++|+|+.+++.|++++...++ ..++ ++.+|..+ ++..+++||
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~-~~~~d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV-----SDRI-AVQQGAPRAFDDVPDNPD 96 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-----TTSE-EEECCTTGGGGGCCSCCS
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-----CCCE-EEecchHhhhhccCCCCC
Confidence 45677999999999999999887753 3799999999999999999876543 3357 77787744 332227899
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|++..+++| ..+++++.++|+|||++++.+..
T Consensus 97 ~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 97 VIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp EEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred EEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 9999999887 36999999999999999987643
No 91
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.63 E-value=1.6e-15 Score=136.94 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=88.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+..+|+++|+|+ |++.|++++...++ ..+++++.+|+.+++.++++||+|
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKL-----EDTITLIKGKIEEVHLPVEKVDVI 135 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSCSCEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCC-----CCcEEEEEeeHHHhcCCCCcEEEE
Confidence 345679999999999999999888766899999997 99999998876544 467999999999988776899999
Q ss_pred Eccc---hhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 235 WVQW---CIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 235 ~~~~---~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
++.+ .+.+.. ++..++.++.++|||||.++
T Consensus 136 vs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFES--MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTC--HHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCchhhccCHH--HHHHHHHHHHhhcCCCcEEE
Confidence 9876 454544 67789999999999999998
No 92
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.63 E-value=2.1e-15 Score=137.24 Aligned_cols=110 Identities=17% Similarity=0.236 Sum_probs=93.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..+++.+.. +++++|+ +.+++.|++++...++ ..++++..+|+.+ +.+ ..||+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~ 251 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL-----ADRVTVAEGDFFK-PLP-VTADV 251 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCS-CCEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-cCC-CCCCE
Confidence 345679999999999999999988654 7999999 9999999998866443 3479999999876 233 35999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec--cC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN--IA 272 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~--~~ 272 (280)
|++..++||+++++...+++++.++|+|||++++.|. +.
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVE 292 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH--
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhc
Confidence 9999999999987778999999999999999999998 64
No 93
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.62 E-value=4.5e-16 Score=130.06 Aligned_cols=108 Identities=16% Similarity=0.165 Sum_probs=87.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCC-cceeEEEccCCCCCC--CCCc-EE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDFTP--ETGR-YD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~--~~~~-fD 232 (280)
++.+|||+|||+|.++..++.++..+|+++|+|+.|++.|++++...++ . .+++++++|+.++.. .+++ ||
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~fD 127 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKC-----SSEQAEVINQSSLDFLKQPQNQPHFD 127 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-----CTTTEEEECSCHHHHTTSCCSSCCEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCC-----CccceEEEECCHHHHHHhhccCCCCC
Confidence 4569999999999999988888776899999999999999999876532 1 468999999876532 2468 99
Q ss_pred EEEccchhhcCChhhHHHHHHHH--HHcCCCCcEEEEEeccC
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKENIA 272 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~--~r~LkpGG~lii~e~~~ 272 (280)
+|+++..++ .. +...+++.+ .++|+|||.+++..+..
T Consensus 128 ~I~~~~~~~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 128 VVFLDPPFH-FN--LAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEECCCSS-SC--HHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEEECCCCC-Cc--cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999987754 33 667889998 67899999999976543
No 94
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.62 E-value=1.1e-15 Score=139.88 Aligned_cols=222 Identities=19% Similarity=0.200 Sum_probs=137.6
Q ss_pred cceeeeehhhH--HHHHHHHhhhccCCCCCCCcccccccccCCCcccccHHHHHHHhhcCCcc--cchhhh-HHHH----
Q 023562 37 TLHLLHVGRRK--EKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGEDGE--QQEKKT-QWYR---- 107 (280)
Q Consensus 37 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~w~~~l~~~~~--~~~~~~-~~y~---- 107 (280)
..-++.+|+.| ..++.+.+.+...- +....+.+.|.+..| ++++...-+..+..... +..... .+|.
T Consensus 103 d~v~~~~Pk~k~~~~~~~~l~~~~~~l--~~g~~i~~~g~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (381)
T 3dmg_A 103 DLVVLALPAGRGTAYVQASLVAAARAL--RMGGRLYLAGDKNKG--FERYFKEARALLGYGVVVRREGPYRVALLEKEKE 178 (381)
T ss_dssp EEEEEECCGGGCHHHHHHHHHHHHHHE--EEEEEEEEEEEGGGT--HHHHHHHHHHHHSCEEEEEEETTEEEEEEECCSC
T ss_pred CEEEEECCcchhHHHHHHHHHHHHHhC--CCCCEEEEEEccHHH--HHHHHHHHHhhhccccccccccCcEEEEEEccCC
Confidence 34577799766 45666666444311 124555678888887 45555555543332100 001110 1110
Q ss_pred --HHHhhhhcccccccc---cccCccccccc-cccchHHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCC
Q 023562 108 --EGISYWEGVEASVDG---VLGGFGNVNEV-DIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN 181 (280)
Q Consensus 108 --~~~~yW~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~ 181 (280)
.....|........+ .+.....++.. .+......+...+...+.. ...++.+|||+|||+|.++..+++.+.
T Consensus 179 ~p~~~~~w~~~~~~~~g~~~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~-~~~~~~~VLDlGcG~G~~~~~la~~g~- 256 (381)
T 3dmg_A 179 APPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGP-EGVRGRQVLDLGAGYGALTLPLARMGA- 256 (381)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEECTTCTTTTSCCHHHHHHHHHHHHHHCT-TTTTTCEEEEETCTTSTTHHHHHHTTC-
T ss_pred CCCCccccceeeEEecCceEEEEeCCCceeCCCCCHHHHHHHHHHHHhhcc-cCCCCCEEEEEeeeCCHHHHHHHHcCC-
Confidence 112344432221111 01011112211 1233334444444432210 023567999999999999999998865
Q ss_pred cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccchhhc---CChhhHHHHHHHHHHc
Q 023562 182 EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH---LTDDDFVSFFKRAKVG 258 (280)
Q Consensus 182 ~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~~l~~---~~~~d~~~~l~~~~r~ 258 (280)
+|+++|+|+.|++.|++++...+ ..++++++|+.+...++++||+|+++..+++ ...++...+++++.++
T Consensus 257 ~V~gvDis~~al~~A~~n~~~~~-------~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~ 329 (381)
T 3dmg_A 257 EVVGVEDDLASVLSLQKGLEANA-------LKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAAR 329 (381)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTT-------CCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcC-------CCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHh
Confidence 79999999999999999987653 3489999999988765679999999988887 3345778999999999
Q ss_pred CCCCcEEEEEecc
Q 023562 259 LKPGGFFVLKENI 271 (280)
Q Consensus 259 LkpGG~lii~e~~ 271 (280)
|||||.++++.|-
T Consensus 330 LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 330 LRPGGVFFLVSNP 342 (381)
T ss_dssp EEEEEEEEEEECT
T ss_pred cCcCcEEEEEEcC
Confidence 9999999998653
No 95
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.62 E-value=1.9e-15 Score=147.48 Aligned_cols=112 Identities=15% Similarity=0.154 Sum_probs=92.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++............+++|+++|+.+++..+++||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 567999999999999999987763 479999999999999998654210000001247999999999998877899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
++..+++|++++....+++++.++|||| .++++.
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 9999999999887788999999999999 777664
No 96
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.62 E-value=1.8e-15 Score=138.24 Aligned_cols=115 Identities=15% Similarity=0.030 Sum_probs=91.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcC-------cCCCCCCCCCcceeEEEccCCCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLA-------PENHMAPDMHKATNFFCVPLQDFTP 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~-------~~~~~~~~~~~~i~~~~~d~~~~~~ 226 (280)
..++.+|||||||+|.++..++..... .|+|||+|+.|++.|+++.. ..++ ...+++|+++|+.++++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl----~~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK----KHAEYTLERGDFLSEEW 246 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB----CCCEEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC----CCCCeEEEECcccCCcc
Confidence 567789999999999999988876444 59999999999999987542 1111 01479999999998764
Q ss_pred CC--CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCCCC
Q 023562 227 ET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGS 276 (280)
Q Consensus 227 ~~--~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~~~ 276 (280)
.+ ..||+|+++..+ + ++++...|+++.+.|||||.|++.|.+...++
T Consensus 247 ~d~~~~aDVVf~Nn~~-F--~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 247 RERIANTSVIFVNNFA-F--GPEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp HHHHHTCSEEEECCTT-C--CHHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred ccccCCccEEEEcccc-c--CchHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 32 379999998765 2 24778889999999999999999999876554
No 97
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.61 E-value=3.5e-15 Score=122.33 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=89.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCc-ceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..+++. ..+++++|+|+.+++.+++++...++ .. ++++..+|+.+... +++||+
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~d~~~~~~-~~~~D~ 122 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNL-----DNYDIRVVHSDLYENVK-DRKYNK 122 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC-----TTSCEEEEECSTTTTCT-TSCEEE
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECchhcccc-cCCceE
Confidence 346679999999999999998877 45799999999999999999876433 11 38999999887543 478999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|+++..+++. .++...+++++.++|+|||.+++..+.
T Consensus 123 v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 123 IITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred EEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 9998887652 346789999999999999999998654
No 98
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.61 E-value=1.7e-15 Score=127.74 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=85.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC--CCCCCCcEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD--FTPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~fDlV 234 (280)
++.+|||+|||+|.++..+++.+ .+++++|+|+.+++.++++. .++..+|+.+ .+.++++||+|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL-------------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS-------------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-------------CcEEEcchhhcCCCCCCCccCEE
Confidence 56799999999999999998774 57999999999999998764 2578888876 34455799999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++..+++|++ +...+++++.++|+|||++++..+.
T Consensus 98 ~~~~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 98 IFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEESCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EECChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999999998 5569999999999999999998643
No 99
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.61 E-value=1.9e-15 Score=132.23 Aligned_cols=116 Identities=17% Similarity=0.180 Sum_probs=88.7
Q ss_pred CCccEEEeecCccH----HHHHHHHhcC-----CcEEEEeCCHHHHHHHHHHcCcC----CCC---------------C-
Q 023562 157 QHLVALDCGSGIGR----ITKNLLIRYF-----NEVDLLEPVSHFLDAARESLAPE----NHM---------------A- 207 (280)
Q Consensus 157 ~~~~VLDlGcG~G~----~s~~l~~~~~-----~~v~~vD~S~~~l~~A~~~~~~~----~~~---------------~- 207 (280)
++.+|+|+|||+|. +++.+++... .+|+|+|+|+.||+.|+++.... ++. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 5665665422 27999999999999999875210 000 0
Q ss_pred -----CCCCcceeEEEccCCCCCCC-CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE--eccC
Q 023562 208 -----PDMHKATNFFCVPLQDFTPE-TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK--ENIA 272 (280)
Q Consensus 208 -----~~~~~~i~~~~~d~~~~~~~-~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~--e~~~ 272 (280)
.....++.|.+.|+.+.+++ .++||+|+|.++++|++++....+++++.+.|+|||++++- |.+.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~~~ 257 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSENFS 257 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCCCT
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEeccccc
Confidence 00013689999999885433 47899999999999999888899999999999999999984 6653
No 100
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.61 E-value=3.1e-15 Score=125.35 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=84.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.|++.|++++...++ ..+++++++|+.+......+||+|
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGL-----SPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCTTGGGTTSCCCSEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC-----CCCEEEEeCchhhhcccCCCCCEE
Confidence 456789999999999999999988 44799999999999999999876543 337999999998843333589999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++...+ +.. +++++.++|||||++++...
T Consensus 127 ~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 127 FIGGGG------SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp EECSCC------CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred EECCcc------cHH-HHHHHHHhcCCCcEEEEEec
Confidence 987643 344 99999999999999998753
No 101
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.61 E-value=2.2e-15 Score=126.04 Aligned_cols=102 Identities=19% Similarity=0.085 Sum_probs=86.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.|++++...++ .++++..+|+.+.....++||+|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDL------HNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCC------CceEEEECCcccCCccCCCccEE
Confidence 4567899999999999999998884 4799999999999999999876543 36899999998765556799999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++..+++|+++ .+.+.|||||++++.-+.
T Consensus 148 ~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 99999999883 478999999999997543
No 102
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.61 E-value=5.3e-16 Score=131.71 Aligned_cols=90 Identities=13% Similarity=0.120 Sum_probs=77.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccC-CCCCCC-CCcEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPE-TGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~fDlV 234 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++. .+++++++|+ ..++.+ +++||+|
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA-----------PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC-----------TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC-----------CCceEEEcchhhccCCcCCCCEEEE
Confidence 567999999999999999988755 6999999999999999983 3589999999 456665 6899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
+++. +...+++++.++|||||.++
T Consensus 116 ~~~~--------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 116 VSRR--------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEES--------CCSGGGGGHHHHEEEEEEEE
T ss_pred EeCC--------CHHHHHHHHHHHcCCCcEEE
Confidence 9871 34479999999999999998
No 103
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.61 E-value=2.1e-15 Score=135.25 Aligned_cols=108 Identities=18% Similarity=0.216 Sum_probs=93.5
Q ss_pred ccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEcc
Q 023562 159 LVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~ 237 (280)
.+|||+|||+|..+..+++..+. +++++|+ +.+++.|++++...++ ..++++..+|+.+ +.+ ++||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA-----GERVSLVGGDMLQ-EVP-SNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH-----TTSEEEEESCTTT-CCC-SSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC-----CCcEEEecCCCCC-CCC-CCCCEEEEc
Confidence 79999999999999999988644 7999999 9999999998764322 3469999999977 443 689999999
Q ss_pred chhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
.++||+++++...+++++.++|+|||++++.|.+...
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 9999999888889999999999999999999987643
No 104
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.61 E-value=2e-15 Score=136.61 Aligned_cols=106 Identities=16% Similarity=0.131 Sum_probs=91.4
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+ |++.|++++...++ ..+++++.+|+.+++.+ ++||+|+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l-----~~~v~~~~~d~~~~~~~-~~~D~Iv 121 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDIII 121 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCC-----CCcEEEEEcchhhCCCC-CceeEEE
Confidence 46679999999999999999887666899999996 99999998876544 45799999999988765 6899999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+..+++|+..++....+..+.++|||||.+++.
T Consensus 122 s~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 122 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999888887777788888999999999999854
No 105
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.61 E-value=4.9e-15 Score=124.75 Aligned_cols=101 Identities=13% Similarity=0.012 Sum_probs=78.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC----CCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~~ 229 (280)
..++.+|||+|||+|..+..+++... .+|+++|+|+.|++.+.+.... ..++.++.+|+.+. +.. +
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~-~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGIV-E 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTTC-C
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--------CCCeEEEEcCCCCchhhcccc-c
Confidence 45678999999999999998887753 3799999999988766555433 23578888888763 333 7
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||+|+++.. . +++...+++++.++|||||.|+++
T Consensus 126 ~fD~V~~~~~-~---~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 126 KVDLIYQDIA-Q---KNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CEEEEEECCC-S---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEecc-C---hhHHHHHHHHHHHHhCCCCEEEEE
Confidence 9999998731 1 234456799999999999999997
No 106
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.60 E-value=4e-15 Score=134.82 Aligned_cols=109 Identities=22% Similarity=0.281 Sum_probs=93.5
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..+++.+.. .++++|+ +.+++.|++++...++ ..++++..+|+.+ +.+ ..||+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~ 252 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL-----SDRVDVVEGDFFE-PLP-RKADA 252 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCS-SCEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-CCC-CCccE
Confidence 345679999999999999999988754 7899999 9999999998866433 3479999999876 222 35999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|++..++||+++++...+++++.++|+|||++++.|.+
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99999999999877789999999999999999999987
No 107
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.60 E-value=7.9e-16 Score=130.40 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=86.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-C--CCCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T--PETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~fD 232 (280)
.+.+|||+|||+|.++..+++..+. .|+|+|+|+.|++.|++++...++ .++.++++|+.++ + +++++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l------~nv~~~~~Da~~~l~~~~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL------SNLRVMCHDAVEVLHKMIPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC------SSEEEECSCHHHHHHHHSCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC------CcEEEEECCHHHHHHHHcCCCChh
Confidence 4568999999999999999988654 799999999999999999876543 4699999998774 2 4568999
Q ss_pred EEEccchhhcCChhhH------HHHHHHHHHcCCCCcEEEEEec
Q 023562 233 VIWVQWCIGHLTDDDF------VSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~------~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.|++++...+...... ..+++.+.++|||||+|++..+
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 9998855433322121 2599999999999999999754
No 108
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.60 E-value=1.8e-15 Score=136.98 Aligned_cols=107 Identities=18% Similarity=0.166 Sum_probs=89.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+ |++.|++++...++ ..+++++++|+.+++.++++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKL-----DHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCC-----CCcEEEEECcHHHccCCCCceEEEE
Confidence 35679999999999999999988766899999994 99999999877654 4569999999999987778999999
Q ss_pred ccchhhcC-ChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 236 VQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 236 ~~~~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+.++.+++ ...++..+++.+.++|||||++++.
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 97653333 2237789999999999999998743
No 109
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.60 E-value=1.8e-15 Score=133.07 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=84.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..++.+ ...+|+++|+|+.|++.|+++++..++ .+++|.++|+.+++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl------~~v~~v~gDa~~l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV------DGVNVITGDETVID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC------CSEEEEESCGGGGG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC------CCeEEEECchhhCC--CCCcCE
Confidence 667899999999999776545444 334799999999999999999876432 47999999998875 579999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|++... .+ +...+++++.++|||||.+++.+.
T Consensus 192 V~~~a~---~~--d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 192 LMVAAL---AE--PKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEECTT---CS--CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCC---cc--CHHHHHHHHHHHcCCCcEEEEEcC
Confidence 998654 33 777999999999999999999763
No 110
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.60 E-value=3.3e-15 Score=125.64 Aligned_cols=107 Identities=16% Similarity=0.197 Sum_probs=86.7
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fDl 233 (280)
++.+|||+|||+|.++..+++..+. +++++|+|+.+++.|++++...++ .++.++++|+.+++ +++++||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV------PNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------SSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCCCCCCE
Confidence 4568999999999999999988654 899999999999999998876432 47999999998865 55678999
Q ss_pred EEccchhhcCChh------hHHHHHHHHHHcCCCCcEEEEEe
Q 023562 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 234 V~~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|++++...+.... ....+++.+.++|+|||.+++..
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9998654322211 23579999999999999999864
No 111
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=1.6e-15 Score=126.48 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=86.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++...++ .++++.++|+.+.. +++||+|++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~--~~~fD~i~~ 131 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI------YDIALQKTSLLADV--DGKFDLIVA 131 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CCCEEEESSTTTTC--CSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEeccccccC--CCCceEEEE
Confidence 5679999999999999998876555899999999999999999876543 23899999997754 479999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+..+++ +..+++++.++|+|||++++.+..
T Consensus 132 ~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 132 NILAEI-----LLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp ESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred CCcHHH-----HHHHHHHHHHhcCCCCEEEEEecC
Confidence 987764 468999999999999999997543
No 112
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=7.1e-15 Score=127.69 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=87.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCc---CCCCCCCCCcceeEEEccCCCC------
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAP---ENHMAPDMHKATNFFCVPLQDF------ 224 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~---~~~~~~~~~~~i~~~~~d~~~~------ 224 (280)
..++.+|||+|||+|.++..++++... +|+++|+++.+++.|++++.. .++ ..+++++++|+.++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l-----~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF-----SARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT-----GGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC-----cceEEEEeCCHHHHhhhhhh
Confidence 345679999999999999999988643 899999999999999999877 544 34699999999887
Q ss_pred -CCCCCcEEEEEccchhh----------------cCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 225 -TPETGRYDVIWVQWCIG----------------HLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 225 -~~~~~~fDlV~~~~~l~----------------~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+.+++||+|+++-.+. |.....+..+++.+.++|||||++++.
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 23457999999983322 222234778999999999999999885
No 113
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.59 E-value=4.6e-15 Score=125.79 Aligned_cols=106 Identities=21% Similarity=0.166 Sum_probs=84.5
Q ss_pred CCCccEEEeecC-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEEE
Q 023562 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG-~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fDl 233 (280)
.++.+|||+||| +|.++..+++....+|+++|+|+.|++.|++++...+ .+++++++|+..+. ..+++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNN-------SNVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTT-------CCCEEEECSSCSSTTTCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhC-------CCcEEEeCCchhhhhcccCceeE
Confidence 467899999999 9999999988754479999999999999999987652 26899999975442 33479999
Q ss_pred EEccchhhcCCh-----------------hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTD-----------------DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~-----------------~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|+++..+++..+ ..+..+++.+.++|||||++++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 999866554332 12478999999999999999985
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.59 E-value=2.3e-15 Score=126.90 Aligned_cols=107 Identities=12% Similarity=0.236 Sum_probs=84.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fDl 233 (280)
++.+|||+|||+|.++..+++.... +|+|+|+|+.|++.|++++...++ .++.++++|+.+++ +++++||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~------~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA------QNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC------SSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCcCCcCE
Confidence 4568999999999999999987543 799999999999999998876433 46999999998764 45678999
Q ss_pred EEccchhhcCChh------hHHHHHHHHHHcCCCCcEEEEEe
Q 023562 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 234 V~~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|++++...+.... ....+++++.++|+|||.|++..
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 9876543322110 13579999999999999999864
No 115
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.59 E-value=7.4e-16 Score=126.68 Aligned_cols=104 Identities=11% Similarity=0.017 Sum_probs=83.9
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.++.+|||+|||+|.++..++...+. +|+++|+|+.|++.+++++...|. ..++.+ .|+.... ++++||+|
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~-----~~~v~~--~d~~~~~-~~~~~DvV 119 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT-----TIKYRF--LNKESDV-YKGTYDVV 119 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC-----SSEEEE--ECCHHHH-TTSEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC-----CccEEE--ecccccC-CCCCcChh
Confidence 35779999999999999988766333 899999999999999999987644 224455 5554433 34799999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
++..++|++. +.+..+.++.+.|+|||+|+--+
T Consensus 120 La~k~LHlL~--~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 120 FLLKMLPVLK--QQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEETCHHHHH--HTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hHhhHHHhhh--hhHHHHHHHHHHhCCCCEEEEeC
Confidence 9999999993 55677779999999999998877
No 116
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.59 E-value=2.1e-15 Score=130.71 Aligned_cols=110 Identities=19% Similarity=0.061 Sum_probs=88.6
Q ss_pred CC-CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCcE
Q 023562 155 NN-QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (280)
Q Consensus 155 ~~-~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~f 231 (280)
.. ++.+|||+|||+|.++..+++++..+|+++|+++.+++.|++++...++ ..+++++++|+.++. .++++|
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~-----~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL-----EDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGGGGTSCTTCE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC-----cccEEEEECcHHHhhhhhccCCc
Confidence 44 5789999999999999999887665899999999999999999887654 456999999998875 335799
Q ss_pred EEEEccchhhcC------------------ChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHL------------------TDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~------------------~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|+++-.+... ...++..+++.+.++|||||++++.-
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 999997443222 11346789999999999999999863
No 117
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.59 E-value=1.4e-14 Score=123.62 Aligned_cols=116 Identities=9% Similarity=0.007 Sum_probs=91.0
Q ss_pred HHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhc-CC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc
Q 023562 142 LQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY-FN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (280)
Q Consensus 142 l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~-~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~ 219 (280)
|...+...+.....+++.+|||+|||+|.++..+++.. .. .|+++|+|+.|++.+++++.. ..|+..+..
T Consensus 62 laa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--------~~ni~~V~~ 133 (233)
T 4df3_A 62 LAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--------RRNIFPILG 133 (233)
T ss_dssp HHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--------CTTEEEEES
T ss_pred HHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--------hcCeeEEEE
Confidence 33444444555557899999999999999999999873 33 799999999999999999876 357888888
Q ss_pred cCCCC---CCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 220 PLQDF---TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 220 d~~~~---~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|..+. +...+++|+|++... |.. +...++.++.+.|||||.++++.
T Consensus 134 d~~~p~~~~~~~~~vDvVf~d~~--~~~--~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 134 DARFPEKYRHLVEGVDGLYADVA--QPE--QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCC--CTT--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccCccccccccceEEEEEEecc--CCh--hHHHHHHHHHHhccCCCEEEEEE
Confidence 87653 344578999986533 323 66789999999999999999874
No 118
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.59 E-value=5.8e-15 Score=134.89 Aligned_cols=216 Identities=17% Similarity=0.151 Sum_probs=132.4
Q ss_pred CcceeeeehhhHHHHHHHHhhhccCCCCCCCcccccccccCCCcccccHHHHHHHhhcCCcccchhhhHHHHHHHhhhhc
Q 023562 36 PTLHLLHVGRRKEKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEG 115 (280)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~w~~~l~~~~~~~~~~~~~y~~~~~yW~~ 115 (280)
...-++.+|+.+..++...+.....-. ....+.+.|.+..+ ..++.++..+..+..... ... .+...+|..
T Consensus 101 ~~~v~~~lpk~~~~l~~~L~~l~~~l~--~~~~i~~~g~~~~~--~~~~~~~l~~~~~~~~~~-~a~----~~~~~~~~~ 171 (375)
T 4dcm_A 101 PGVVLIKVPKTLALLEQQLRALRKVVT--SDTRIIAGAKARDI--HTSTLELFEKVLGPTTTT-LAW----KKARLINCT 171 (375)
T ss_dssp CSEEEEECCSCHHHHHHHHHHHHTTCC--TTSEEEEEEEGGGC--CHHHHHHHHHHTCCEEEC-CCB----TTEEEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHhhCC--CCCEEEEEecccch--HHHHHHHHHhhcCccchh-hhh----ceeEEEEEe
Confidence 334588899999999888777665321 23445566666555 456677776664431000 000 001122321
Q ss_pred ccc-c-ccc------cccC-------cccccc-ccccchHHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhc
Q 023562 116 VEA-S-VDG------VLGG-------FGNVNE-VDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRY 179 (280)
Q Consensus 116 ~~~-~-~~~------~~~~-------~~~~~~-~~~~~~~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~ 179 (280)
... . ... ...+ ...++. ..+.....++... +. ..++.+|||+|||+|.++..+++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~Fs~~~~d~~~~~ll~~----l~---~~~~~~VLDlGcG~G~~s~~la~~~ 244 (375)
T 4dcm_A 172 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH----LP---ENLEGEIVDLGCGNGVIGLTLLDKN 244 (375)
T ss_dssp CCCCCCCCCCSCEEEEETTTTEEEEECTTCTTCSSCCHHHHHHHHT----CC---CSCCSEEEEETCTTCHHHHHHHHHC
T ss_pred CCCCCCCCCCCceEEEecCCceEEEeCCCcccCCcccHHHHHHHHh----Cc---ccCCCeEEEEeCcchHHHHHHHHHC
Confidence 100 0 000 0000 011111 1222223333332 22 3345799999999999999999886
Q ss_pred C-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccchhhc---CChhhHHHHHHHH
Q 023562 180 F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH---LTDDDFVSFFKRA 255 (280)
Q Consensus 180 ~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~~l~~---~~~~d~~~~l~~~ 255 (280)
+ .+|+++|+|+.|++.|++++..+++. ...+++|..+|+.+. .++++||+|+++..+++ +.+.....+++++
T Consensus 245 p~~~V~gvD~s~~al~~Ar~n~~~ngl~---~~~~v~~~~~D~~~~-~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~ 320 (375)
T 4dcm_A 245 PQAKVVFVDESPMAVASSRLNVETNMPE---ALDRCEFMINNALSG-VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 320 (375)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHHCGG---GGGGEEEEECSTTTT-CCTTCEEEEEECCCC-------CCHHHHHHHHH
T ss_pred CCCEEEEEECcHHHHHHHHHHHHHcCCC---cCceEEEEechhhcc-CCCCCeeEEEECCCcccCcccCHHHHHHHHHHH
Confidence 3 38999999999999999998775431 113588899998874 34479999999988875 3333456799999
Q ss_pred HHcCCCCcEEEEEecc
Q 023562 256 KVGLKPGGFFVLKENI 271 (280)
Q Consensus 256 ~r~LkpGG~lii~e~~ 271 (280)
.++|||||.++++.|-
T Consensus 321 ~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 321 RRCLKINGELYIVANR 336 (375)
T ss_dssp HHHEEEEEEEEEEEET
T ss_pred HHhCCCCcEEEEEEEC
Confidence 9999999999997553
No 119
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.58 E-value=3.6e-16 Score=144.52 Aligned_cols=105 Identities=19% Similarity=0.217 Sum_probs=83.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++++. +|+++|+|+.|++.|+++... .....|...+...++.++++||+|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIR--------VRTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCC--------EECSCCSHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCC--------cceeeechhhHhhcccCCCCEEEE
Confidence 45678999999999999999998876 699999999999999887211 011112233444444445799999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++..+++|++ ++..+++++.++|||||++++...
T Consensus 176 ~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 176 YAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9999999998 778999999999999999999754
No 120
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.58 E-value=2.7e-15 Score=126.58 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=83.2
Q ss_pred CccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEcc
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~ 237 (280)
+.+|||+|||+|.++..++.. +++|+|+.|++.++++ ++++.++|+.+++.++++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 579999999999999977643 9999999999999876 2678899998887766899999999
Q ss_pred chhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
.+++|++ +...+++++.++|+|||.+++.+..
T Consensus 110 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 110 TTICFVD--DPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp SCGGGSS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chHhhcc--CHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 9999997 6679999999999999999998654
No 121
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.58 E-value=2e-15 Score=129.42 Aligned_cols=102 Identities=17% Similarity=0.192 Sum_probs=84.4
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC---CCcE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~f 231 (280)
.++.+|||+|||+|..+..++.... .+|+++|+|+.|++.|++++...++ .+++++++|+.+++.. +++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL------ENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEeccHHHhcccccccCCc
Confidence 3567999999999999998886433 3799999999999999998876543 3599999998877642 4789
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|++..+ . ++..+++.+.++|+|||++++..
T Consensus 143 D~V~~~~~----~--~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 143 DIVTARAV----A--RLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEEEECC----S--CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cEEEEecc----C--CHHHHHHHHHHhcCCCCEEEEEe
Confidence 99998763 2 57799999999999999999874
No 122
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.58 E-value=9.2e-15 Score=132.12 Aligned_cols=109 Identities=14% Similarity=0.120 Sum_probs=87.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..++++++. +++++|+ +.++. +++....+. ..+++|..+|+.+ +.+ +||+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~-----~~~v~~~~~d~~~-~~p--~~D~ 250 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV-----AGRWKVVEGDFLR-EVP--HADV 250 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG-----TTSEEEEECCTTT-CCC--CCSE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC-----CCCeEEEecCCCC-CCC--CCcE
Confidence 446789999999999999999988766 7899999 45554 333332222 4579999999963 222 8999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
|++.+++||+++++...++++++++|||||++++.|.+...
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 99999999999887789999999999999999999987644
No 123
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.57 E-value=1.1e-14 Score=123.47 Aligned_cols=100 Identities=20% Similarity=0.134 Sum_probs=84.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++.... + ++++..+|+.+....+++||+|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-------~-~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY-------N-NIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC-------S-SEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc-------C-CeEEEECCcccccccCCCccEE
Confidence 4567799999999999999998887 57999999999999999998763 2 6899999987733334789999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++..+++|+.+ ++.++|+|||++++..+.
T Consensus 139 ~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 139 VVWATAPTLLC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EESSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred EECCcHHHHHH--------HHHHHcCCCcEEEEEEcC
Confidence 99999999872 588999999999998654
No 124
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.57 E-value=2.7e-15 Score=122.14 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=85.8
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++...++ ..+++++++|+.++ +..+++||+|+
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-----ENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-----GGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcHHHhHHhhcCCCCEEE
Confidence 5679999999999999999888656899999999999999999876543 34689999998773 32236799999
Q ss_pred ccchhhcCChhhHHHHHHHHH--HcCCCCcEEEEEecc
Q 023562 236 VQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~--r~LkpGG~lii~e~~ 271 (280)
++..++. .....+++.+. ++|+|||++++..+.
T Consensus 106 ~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 106 LDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp ECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 9866532 24557777777 999999999997554
No 125
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=3.2e-15 Score=124.95 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=85.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..++.++..+|+++|+|+.|++.|++++...++ .+++++++|+.++ +..+++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~D~~~~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA------GNARVVNSNAMSFLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCHHHHHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEECCHHHHHhhcCCCCCEEE
Confidence 4569999999999999988888776899999999999999999876532 4689999998763 43457899999
Q ss_pred ccchhhcCChhhHHHHHHHHHH--cCCCCcEEEEEecc
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKENI 271 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r--~LkpGG~lii~e~~ 271 (280)
+...++ .. ....+++.+.+ +|+|||++++..+.
T Consensus 128 ~~~p~~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 128 VDPPFR-RG--LLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ECCSSS-TT--THHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ECCCCC-CC--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 987644 22 55678888866 59999999987544
No 126
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.57 E-value=2.8e-15 Score=125.79 Aligned_cols=89 Identities=24% Similarity=0.299 Sum_probs=75.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+. .+|+++|+|+. ++++.++|+.+++.++++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------------CceEEEeccccCCCCCCCEeEEE
Confidence 356799999999999988662 46999999876 25678899988877778999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+..++|+ . +...+++++.++|+|||.+++.+...
T Consensus 121 ~~~~l~~-~--~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 121 FCLSLMG-T--NIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp EESCCCS-S--CHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred Eehhccc-c--CHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 9999964 4 67899999999999999999987653
No 127
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.56 E-value=4e-17 Score=139.69 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=82.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+ .+|+++|+|+.|++.|++++...++ ..+++++++|+.+++ .+++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGI-----ADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCC-----CcCeEEEECChHHhc-ccCCCCEEEE
Confidence 56799999999999999999886 5799999999999999999876543 357999999998876 3479999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
+..+++.... ...+.++.++|+|||++++
T Consensus 151 ~~~~~~~~~~--~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 151 SPPWGGPDYA--TAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCCCSSGGGG--GSSSBCTTTSCSSCHHHHH
T ss_pred CCCcCCcchh--hhHHHHHHhhcCCcceeHH
Confidence 9888886632 3456667777777777544
No 128
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.56 E-value=4.1e-15 Score=121.70 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=84.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC----CCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (280)
++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++...++ ..+++++++|+.++.. .+++||
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE-----PEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-----CcceEEEECcHHHHHHHHHhcCCCCC
Confidence 5679999999999999988887656899999999999999999876533 3468999999876421 147899
Q ss_pred EEEccchhhcCChhhHHHHHHHH--HHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~--~r~LkpGG~lii~e~~ 271 (280)
+|+++..++.. ....+++.+ .++|+|||++++..+.
T Consensus 119 ~i~~~~~~~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 119 LVLLDPPYAKQ---EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEECCCGGGC---CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EEEECCCCCch---hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 99998775432 344667777 8899999999987443
No 129
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=5.7e-15 Score=129.57 Aligned_cols=103 Identities=15% Similarity=0.162 Sum_probs=87.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++..+++ ..+++++++|+.++.. +++||+|++
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~-----~~~v~~~~~D~~~~~~-~~~fD~Vi~ 198 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPG-ENIADRILM 198 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCC-CSCEEEEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECCHHHhcc-cCCccEEEE
Confidence 5679999999999999999988776799999999999999999887654 3458999999999876 579999998
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
.... ....++..+.++|+|||++++.++.
T Consensus 199 ~~p~------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 199 GYVV------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CCCS------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCch------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 6442 2347899999999999999998765
No 130
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.56 E-value=1e-14 Score=130.99 Aligned_cols=105 Identities=16% Similarity=0.188 Sum_probs=87.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+..+|+++|+| .|++.|++++...++ ..+++++.+|+.+++.++++||+|++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGF-----SDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCC-----CCCEEEEECchhhccCCCCcccEEEE
Confidence 457999999999999999888776689999999 699999999876554 45799999999998766679999999
Q ss_pred cchhhcC-ChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 237 QWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 237 ~~~l~~~-~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
....+++ ....+..++.++.++|||||+++.
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 8554333 223677899999999999999974
No 131
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.56 E-value=3.1e-14 Score=121.15 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=83.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC----CCCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD----FTPETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~----~~~~~~ 229 (280)
..++.+|||+|||+|.++..+++... .+|+++|+|+.|++.+++++.. ..++.++.+|+.+ .++. +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--------RENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--------CTTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--------CCCeEEEECCCCCcccccccC-c
Confidence 45678999999999999999998743 4799999999999999998765 2578999999988 6655 7
Q ss_pred cEEEEEccchhhcCChh-hHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~-d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||+|+ ++++++ ....+++++.+.|||||++++.
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 899998 334432 3367899999999999999996
No 132
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.55 E-value=7.3e-15 Score=138.26 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=90.1
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+ |++.|++++...++ ..+++++.+|+.+++.+ ++||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl-----~~~v~~~~~d~~~~~~~-~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCC-----CCcEEEEECchhhCccC-CCeEEEE
Confidence 35679999999999999988876655899999998 99999998877654 46799999999987655 6899999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
++..++|+..++....+..+.++|||||++++
T Consensus 230 s~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 230 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99888887766777888899999999999985
No 133
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.55 E-value=8e-15 Score=126.26 Aligned_cols=111 Identities=14% Similarity=0.062 Sum_probs=86.6
Q ss_pred CCccEEEeecCccHHHHHHHHh--cC-CcEEEEeCCHHHHHHHHHHcCcC---CCCCCCCCcc-----------------
Q 023562 157 QHLVALDCGSGIGRITKNLLIR--YF-NEVDLLEPVSHFLDAARESLAPE---NHMAPDMHKA----------------- 213 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~--~~-~~v~~vD~S~~~l~~A~~~~~~~---~~~~~~~~~~----------------- 213 (280)
++.+|||+|||+|.++..+++. .. .+|+++|+|+.|++.|++++... ++ ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 125 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL-----TARELERREQSERFGKPSYL 125 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH-----HHHHHHHHHHHHHHCCHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc-----cccchhhhhhhhhcccccch
Confidence 5679999999999999999876 32 37999999999999999887543 11 111
Q ss_pred --------ee-------------EEEccCCCCCC-----CCCcEEEEEccchhhcCCh-------hhHHHHHHHHHHcCC
Q 023562 214 --------TN-------------FFCVPLQDFTP-----ETGRYDVIWVQWCIGHLTD-------DDFVSFFKRAKVGLK 260 (280)
Q Consensus 214 --------i~-------------~~~~d~~~~~~-----~~~~fDlV~~~~~l~~~~~-------~d~~~~l~~~~r~Lk 260 (280)
++ |.++|+.+... ...+||+|+++..+++... +.+..+++++.++|+
T Consensus 126 ~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 205 (250)
T 1o9g_A 126 EAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALP 205 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSC
T ss_pred hhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcC
Confidence 56 99999877432 3348999999977666542 456799999999999
Q ss_pred CCcEEEEEeccC
Q 023562 261 PGGFFVLKENIA 272 (280)
Q Consensus 261 pGG~lii~e~~~ 272 (280)
|||+++++.+..
T Consensus 206 pgG~l~~~~~~~ 217 (250)
T 1o9g_A 206 AHAVIAVTDRSR 217 (250)
T ss_dssp TTCEEEEEESSS
T ss_pred CCcEEEEeCcch
Confidence 999999976543
No 134
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.55 E-value=1.3e-14 Score=125.34 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=85.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC---CCcE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~f 231 (280)
.++.+|||+|||+|..+..++..... +|+++|+|+.+++.|++++...++ .+++++++|+++++.. .++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l------~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL------KGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC------CceEEEECcHHHhhcccccCCCc
Confidence 45679999999999999998877543 899999999999999999877544 3599999999887642 3799
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|+|++..+ . ++..+++.+.++|||||++++...
T Consensus 153 D~I~s~a~----~--~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 153 ARAVARAV----A--PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEEEEESS----C--CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred eEEEECCc----C--CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99999754 2 567899999999999999988643
No 135
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.54 E-value=1.1e-14 Score=124.86 Aligned_cols=113 Identities=12% Similarity=0.082 Sum_probs=81.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CC--CCCCcE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETGRY 231 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~--~~~~~f 231 (280)
.++.+|||||||+|.++..+++.... .|+|+|+|+.|++.|++++............++.++++|+.+ ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 35568999999999999999877654 799999999999999877542000000002579999999987 44 556899
Q ss_pred EEEEccchhhcCChh------hHHHHHHHHHHcCCCCcEEEEE
Q 023562 232 DVIWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 232 DlV~~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|.|++++.-.+.... ....+++++.++|||||.|++.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 999876543221100 0147999999999999999986
No 136
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.54 E-value=2.1e-15 Score=144.92 Aligned_cols=109 Identities=17% Similarity=0.110 Sum_probs=89.6
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC--CCCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fDl 233 (280)
.++.+|||||||.|.++..|++.|.. |+|||+|+.+|+.|+.++...+. .+++|.+++++++ ..++++||+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~-V~giD~~~~~i~~a~~~a~~~~~------~~~~~~~~~~~~~~~~~~~~~fD~ 137 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGAT-IVGIDFQQENINVCRALAEENPD------FAAEFRVGRIEEVIAALEEGEFDL 137 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTSTT------SEEEEEECCHHHHHHHCCTTSCSE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCE-EEEECCCHHHHHHHHHHHHhcCC------CceEEEECCHHHHhhhccCCCccE
Confidence 35689999999999999999998875 99999999999999998876432 4799999999887 345579999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|+|..+++|+++++....+..+.+.|+++|..++...+
T Consensus 138 v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 138 AIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp EEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred EEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 99999999998655444456677788888877766544
No 137
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.54 E-value=8.6e-15 Score=124.87 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=83.9
Q ss_pred CCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--CCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~fDl 233 (280)
++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.|++++...++ ..+++++.+|+.+... .+++||+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF-----ENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhhccCCccE
Confidence 56799999999999999998743 23799999999999999999877544 3579999999977532 2479999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|++... ...+..+++.+.++|||||+|++.+
T Consensus 146 V~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 146 IFIDAA-----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEEETT-----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEcCc-----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 997643 2356789999999999999997743
No 138
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=2.1e-14 Score=120.51 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=84.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.+++++...++ .++++..+|+......+++||
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD 148 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------DNVIVIVGDGTLGYEPLAPYD 148 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEECCcccCCCCCCCee
Confidence 45677999999999999999988763 4799999999999999998765432 358899998854333347899
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+|++..+++|++ +++.++|||||.+++..+
T Consensus 149 ~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 149 RIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEEESSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHHcCCCcEEEEEEC
Confidence 999999999887 278899999999999854
No 139
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=1.8e-14 Score=128.58 Aligned_cols=102 Identities=21% Similarity=0.202 Sum_probs=86.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~--~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..+++.+.. +|+++|+|+.+++.|++++...++ .++++..+|+.+..+.+++||
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------~~v~~~~~d~~~~~~~~~~fD 146 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------ENVIFVCGDGYYGVPEFSPYD 146 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCeEEEECChhhccccCCCeE
Confidence 456789999999999999999887652 599999999999999999876543 358999999987654457899
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+|++..+++|+. +.+.+.|||||++++..+
T Consensus 147 ~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 147 VIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred EEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 999999999987 357889999999999854
No 140
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.54 E-value=8e-15 Score=119.95 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=85.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++...+. ..++++.++|+.+.....++||+|
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 104 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGL-----GDNVTLMEGDAPEALCKIPDIDIA 104 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTC-----CTTEEEEESCHHHHHTTSCCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCC-----CcceEEEecCHHHhcccCCCCCEE
Confidence 4567799999999999999998777 6799999999999999998765432 346889999876621112589999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++..++++ +..+++.+.++|+|||.+++...
T Consensus 105 ~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 105 VVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp EESCCTTC-----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCchHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 99877653 46899999999999999998754
No 141
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.54 E-value=1.7e-14 Score=131.47 Aligned_cols=103 Identities=17% Similarity=0.344 Sum_probs=88.1
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.+..+|||||||+|.++..++++++. +++++|+ +.|++.|++ ..+++|..+|+.+ +.+.+ |+|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~p~~--D~v 265 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------------FSGVEHLGGDMFD-GVPKG--DAI 265 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------------cCCCEEEecCCCC-CCCCC--CEE
Confidence 45679999999999999999988765 7999999 889876643 2468999999986 44433 999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
++.+++||+++++...++++++++|+|||++++.|.+...
T Consensus 266 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 266 FIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp EEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999888889999999999999999999988643
No 142
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.54 E-value=1.2e-14 Score=123.46 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=84.4
Q ss_pred CccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCC-cceeEEEccCCCCC--CCCCcEE
Q 023562 158 HLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDFT--PETGRYD 232 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~fD 232 (280)
+.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ . .+++++++|+.++. ..+++||
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-----SPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 44999999999999999987643 3799999999999999999887654 3 57999999876652 2247999
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|++.... .+...+++.+.++|||||+|++.+.+
T Consensus 132 ~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 132 LVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp EEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred eEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 99986542 35668999999999999999885443
No 143
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.54 E-value=2.4e-14 Score=119.30 Aligned_cols=101 Identities=14% Similarity=0.083 Sum_probs=84.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..++.... .+++++|+|+.+++.+++++...++ .++++.++|+.+++. .++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~-~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL------ENIEPVQSRVEEFPS-EPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------SSEEEEECCTTTSCC-CSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEecchhhCCc-cCCcCEEE
Confidence 357999999999999999987743 3899999999999999998876433 348999999988763 37899999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++.+ . ++..+++.+.++|+|||++++...
T Consensus 138 ~~~~----~--~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRAF----A--SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCS----S--SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred Eecc----C--CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 8643 2 566899999999999999998743
No 144
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.53 E-value=7.3e-15 Score=124.22 Aligned_cols=107 Identities=10% Similarity=0.089 Sum_probs=83.7
Q ss_pred CCccEEEeecCccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CC-C----C
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP-E----T 228 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~--~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~-~----~ 228 (280)
++.+|||+|||+|..+..+++.. ..+|+++|+|+.|++.|++++...++ ..+++++++|+.++ +. . .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----QDKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHGGGTTTTSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----CCceEEEECCHHHHHHHHHHhcCC
Confidence 45799999999999999998753 23799999999999999999876544 45699999997553 21 1 2
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++||+|++....++.. +...++..+ ++|||||+|++.+..
T Consensus 133 ~~fD~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCSEEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CceEEEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEeCCC
Confidence 6899999987666544 445677777 999999999876543
No 145
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.53 E-value=9.6e-14 Score=125.80 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=94.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
.....+|+|||||+|.++..++++++. ++++.|. |.+++.|+++....+ ..+++|..+|+.+.++ ..+|+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~------~~rv~~~~gD~~~~~~--~~~D~ 247 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE------EEQIDFQEGDFFKDPL--PEADL 247 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--------CCSEEEEESCTTTSCC--CCCSE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc------cCceeeecCccccCCC--CCceE
Confidence 345568999999999999999999887 7788886 889999999886532 3679999999876543 35899
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
|++.+++|++++++...+|+++++.|+|||.++|.|.+..
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 9999999999998889999999999999999999998864
No 146
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.53 E-value=9.4e-15 Score=122.95 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=80.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcC----cCCCCCCCCCcceeEEEccCCCCCCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLA----PENHMAPDMHKATNFFCVPLQDFTPETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~----~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 229 (280)
..++.+|||+|||+|.++..+++.++. +|+++|+|+.|++.+.++.. ..+ ..++++.++|+.+++..++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~------~~~v~~~~~d~~~l~~~~~ 98 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG------LPNLLYLWATAERLPPLSG 98 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC------CTTEEEEECCSTTCCSCCC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC------CCceEEEecchhhCCCCCC
Confidence 346679999999999999999988533 89999999999986433222 221 2479999999999887655
Q ss_pred cEEEEEcc---chhh--cCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 230 RYDVIWVQ---WCIG--HLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 230 ~fDlV~~~---~~l~--~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+ |.|++. ..++ |++ +...+++++.++|||||.+++.-
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEE
T ss_pred C-CEEEEEccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEe
Confidence 5 666533 3332 555 33589999999999999999964
No 147
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.53 E-value=2.2e-14 Score=130.57 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=88.5
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.+..+|||||||+|.++..++++++. +++++|+ +.+++.|++ ..+++|..+|+.+ +.+.+ |+|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~D~~~-~~p~~--D~v 263 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------------FPGVTHVGGDMFK-EVPSG--DTI 263 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------------cCCeEEEeCCcCC-CCCCC--CEE
Confidence 35679999999999999999988765 7999999 888876643 2469999999987 54433 999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (280)
++.+++|++++++...++++++++|||||++++.|.+...
T Consensus 264 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 264 LMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred EehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999888899999999999999999999988644
No 148
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=130.40 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=86.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||||||+|.++...++.|..+|++||.|+ |++.|++++..+++ ..+++++.++++++.++ ++||+|++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~-----~~~i~~i~~~~~~~~lp-e~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGL-----EDRVHVLPGPVETVELP-EQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCC-----CceEEEEeeeeeeecCC-ccccEEEe
Confidence 4678999999999999988888888999999996 89999999888766 57799999999998876 79999998
Q ss_pred cchhhcCC-hhhHHHHHHHHHHcCCCCcEEEE
Q 023562 237 QWCIGHLT-DDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 237 ~~~l~~~~-~~d~~~~l~~~~r~LkpGG~lii 267 (280)
.+.-..+- ...+..++....+.|||||.++-
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 64322222 23678899999999999999875
No 149
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.52 E-value=1.8e-14 Score=131.37 Aligned_cols=102 Identities=15% Similarity=0.199 Sum_probs=87.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.++.+|||+|||+|.++..++++++. .++++|+ +.|++.|++. .++++..+|+.+ +.+ . ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~~-~-~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL------------SGIEHVGGDMFA-SVP-Q-GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------------TTEEEEECCTTT-CCC-C-EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc------------CCCEEEeCCccc-CCC-C-CCEE
Confidence 35679999999999999999988765 6888899 9999866531 358999999977 444 3 9999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
++..++||+++++...++++++++|+|||++++.|.+..
T Consensus 272 ~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 272 ILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999999999977777999999999999999999988754
No 150
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.52 E-value=1.6e-14 Score=122.98 Aligned_cols=107 Identities=19% Similarity=0.147 Sum_probs=79.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCC-HHHHHHH---HHHcCcCCCCCCCCCcceeEEEccCCCCCCC-CC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPV-SHFLDAA---RESLAPENHMAPDMHKATNFFCVPLQDFTPE-TG 229 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S-~~~l~~A---~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~ 229 (280)
.++.+|||+|||+|.++..+++.... .|+|+|+| +.|++.| +++....++ .++.|.++|+.+++.. .+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------~~v~~~~~d~~~l~~~~~d 96 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL------SNVVFVIAAAESLPFELKN 96 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------SSEEEECCBTTBCCGGGTT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------CCeEEEEcCHHHhhhhccC
Confidence 35679999999999999999865444 79999999 7788776 666655432 4689999999988532 25
Q ss_pred cEEEEEccchhhcCC---hhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLT---DDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~---~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+|.|++++...+.. ..+...++++++++|||||.+++.
T Consensus 97 ~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 97 IADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp CEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 678777765422110 012347899999999999999994
No 151
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.52 E-value=2.8e-14 Score=123.03 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=84.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CC--CCCcE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP--ETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~--~~~~f 231 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..++++..+|+.+. +. ..++|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----DQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHTCCSCCCC
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHhcCCCCCe
Confidence 567999999999999999987743 3799999999999999999877554 45799999998663 21 23589
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|+|++... ..+...+++++.++|||||+|++.+..
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 138 DLIFIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred EEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 99998653 336678999999999999988876544
No 152
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.51 E-value=7.1e-14 Score=122.71 Aligned_cols=110 Identities=9% Similarity=0.076 Sum_probs=82.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeC-CHHHHHHHHHHc-----CcCCCCCCCCCcceeEEEccCCCCC--C-
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP-VSHFLDAARESL-----APENHMAPDMHKATNFFCVPLQDFT--P- 226 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~-S~~~l~~A~~~~-----~~~~~~~~~~~~~i~~~~~d~~~~~--~- 226 (280)
.++.+|||+|||+|.++..++..+..+|+++|+ |+.|++.|++++ ...++.. ....++++...+..+.. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSET-VKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhccccc-CCCCCeEEEEecCCCccHHHH
Confidence 356799999999999999888776658999999 899999999998 3322200 00035777766655431 1
Q ss_pred ---CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCC---C--CcEEEEE
Q 023562 227 ---ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLK---P--GGFFVLK 268 (280)
Q Consensus 227 ---~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~Lk---p--GG~lii~ 268 (280)
.+++||+|++..+++|.+ +...+++.+.++|+ | ||.+++.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 247899999999998855 77899999999999 9 9987664
No 153
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.51 E-value=7.4e-14 Score=118.86 Aligned_cols=102 Identities=15% Similarity=-0.010 Sum_probs=81.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-C-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC---CCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~~ 229 (280)
..++.+|||+|||+|.++..+++.. . .+|+++|+|+.|++.+.++... ..++++..+|+.+. +..++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------RTNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------CTTEEEECSCTTCGGGGGGGCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------cCCeEEEEcccCChhhhcccCC
Confidence 4567899999999999999999874 2 4799999999988877776654 24689999999873 33357
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||+|++... .++....++.++.++|||||+++++
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 8999998654 2234456789999999999999995
No 154
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.51 E-value=6.4e-14 Score=129.70 Aligned_cols=114 Identities=13% Similarity=-0.011 Sum_probs=87.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHH-------HHHcCcCCCCCCCCCcceeEEEccCCCC--
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAA-------RESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A-------~~~~~~~~~~~~~~~~~i~~~~~d~~~~-- 224 (280)
..++.+|||+|||+|.++..++.... ..|+|+|+|+.+++.| ++++...++. ..+++++++|....
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~----~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR----LNNVEFSLKKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----CCCEEEEESSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----CCceEEEEcCcccccc
Confidence 45678999999999999999988644 3799999999999988 7777654320 14688888753321
Q ss_pred CC--CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCCCC
Q 023562 225 TP--ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG 275 (280)
Q Consensus 225 ~~--~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~~ 275 (280)
++ ..++||+|+++.++ +. +++..+++++.+.|||||.|++.+......
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred ccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 11 13689999988666 32 477789999999999999999998765544
No 155
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.50 E-value=7.6e-15 Score=118.25 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=81.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--C--CCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P--ETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~--~~~~fD 232 (280)
++.+|||+|||+|.++..+++.+.. |+++|+|+.|++.|++++...+ .+++++++|+.++. . ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTG-------LGARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHT-------CCCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcC-------CceEEEeccHHHHHHhhhccCCceE
Confidence 4579999999999999999988776 9999999999999999887542 26889999887642 1 124899
Q ss_pred EEEccchhhcCChhhHHHHHHHHH--HcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~--r~LkpGG~lii~e~~ 271 (280)
+|+++..++ . ....+++.+. ++|+|||++++..+.
T Consensus 113 ~i~~~~~~~--~--~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 113 VAFMAPPYA--M--DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEEECCCTT--S--CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEEECCCCc--h--hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 999997765 2 2335666666 999999999987554
No 156
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.50 E-value=3e-14 Score=128.83 Aligned_cols=102 Identities=13% Similarity=0.238 Sum_probs=86.9
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.+..+|||+|||+|.++..++++++. +++++|+ +.|++.|++. .++++..+|+.+ +.+ .||+|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~p--~~D~v 250 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------------NNLTYVGGDMFT-SIP--NADAV 250 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------------TTEEEEECCTTT-CCC--CCSEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------------CCcEEEeccccC-CCC--CccEE
Confidence 35579999999999999999988654 7999999 9999876541 248999999966 433 39999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCC---CcEEEEEeccCC
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIAR 273 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~Lkp---GG~lii~e~~~~ 273 (280)
++.+++||+++++...++++++++||| ||++++.|.+..
T Consensus 251 ~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 251 LLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred EeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 999999999977777999999999999 999999998754
No 157
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=3.7e-14 Score=115.17 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=83.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++ ...+++++|+|+.+++.+++++...++ .++++.++|+.+ +.++++||+|
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~~d~~~-~~~~~~~D~i 104 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI------KNCQIIKGRAED-VLDKLEFNKA 104 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC------CSEEEEESCHHH-HGGGCCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC------CcEEEEECCccc-cccCCCCcEE
Confidence 44667999999999999998887 444799999999999999999876432 468999999877 4444689999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+++.+ .+...+++.+.++ |||.+++...
T Consensus 105 ~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 105 FIGGT------KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp EECSC------SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred EECCc------ccHHHHHHHHhhC--CCCEEEEEec
Confidence 99887 2667899999998 9999999864
No 158
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.50 E-value=2.2e-13 Score=115.32 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=82.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-C-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC---CCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~ 229 (280)
..++.+|||+|||+|.++..+++.. . .+|+++|+|+.|++.+++++.. ..+++++++|+.+.. ..++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--------RRNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--------CTTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--------cCCCEEEEccCCCcchhhcccC
Confidence 4567799999999999999998773 2 4799999999999999998875 257899999998732 1236
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||+|++... .++....+++++.++|||||++++.
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999997654 2223446699999999999999997
No 159
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.50 E-value=3.1e-14 Score=115.67 Aligned_cols=96 Identities=21% Similarity=0.100 Sum_probs=79.2
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+ +|+++|+|+.|++. . .++++.++|+.+ +..+++||+|++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~---------~~~~~~~~d~~~-~~~~~~fD~i~~ 84 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H---------RGGNLVRADLLC-SINQESVDVVVF 84 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C---------SSSCEEECSTTT-TBCGGGCSEEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c---------cCCeEEECChhh-hcccCCCCEEEE
Confidence 45699999999999999998777 79999999999987 1 357899999987 334479999999
Q ss_pred cchhhcCChh-------hHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDD-------DFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~-------d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+..+++.++. +...+++++.+.| |||.+++.++.
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 9888765533 3457889999999 99999997653
No 160
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=4e-14 Score=120.45 Aligned_cols=104 Identities=13% Similarity=0.206 Sum_probs=85.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCC--CCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPE--TGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~fD 232 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..++++..+|+.+. +.. +++||
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL-----ESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhcccCCCcc
Confidence 557999999999999999988753 4799999999999999999876543 34689999998775 211 36899
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+|++..... +...+++.+.++|+|||++++.+.
T Consensus 129 ~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 129 VLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred EEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 999977643 567899999999999999988643
No 161
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.49 E-value=3.8e-15 Score=124.18 Aligned_cols=105 Identities=13% Similarity=0.042 Sum_probs=64.9
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC-----C
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~ 229 (280)
.++.+|||+|||+|.++..+++.+.. +++++|+|+.|++.|++++...+ .++++.++|+.+ +..+ +
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~-~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG-------AVVDWAAADGIE-WLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------------CCHHHHHH-HHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC-------CceEEEEcchHh-hhhhhhhccC
Confidence 46789999999999999999988654 89999999999999999887642 257788888766 3222 7
Q ss_pred cEEEEEccchhh------cCChhh------------------HHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIG------HLTDDD------------------FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~------~~~~~d------------------~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||+|+++..++ ++++.. +..+++++.++|||||++++.
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999999974432 222211 178999999999999994444
No 162
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.49 E-value=4.8e-14 Score=122.72 Aligned_cols=125 Identities=16% Similarity=0.173 Sum_probs=90.2
Q ss_pred HHHHHHHHhccCCCccCCCCccEEEeecCc--cHHHHHHHHhc-CC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcce
Q 023562 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGI--GRITKNLLIRY-FN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKAT 214 (280)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~--G~~s~~l~~~~-~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i 214 (280)
..|+.+.+..... .....+|||||||+ +..+..++++. +. +|+++|.|+.||+.|++++...+ ..++
T Consensus 63 r~fl~rav~~l~~---~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~------~~~~ 133 (277)
T 3giw_A 63 RDWMNRAVAHLAK---EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP------EGRT 133 (277)
T ss_dssp HHHHHHHHHHHHH---TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS------SSEE
T ss_pred HHHHHHHHHHhcc---ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC------CCcE
Confidence 3566665543211 11235899999997 33444455542 22 89999999999999999987531 2469
Q ss_pred eEEEccCCCCCC----C--CCcEE-----EEEccchhhcCChhh-HHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 215 NFFCVPLQDFTP----E--TGRYD-----VIWVQWCIGHLTDDD-FVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 215 ~~~~~d~~~~~~----~--~~~fD-----lV~~~~~l~~~~~~d-~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+|+++|+.++.. + .+.|| .|+++.+|||+++.+ ...+++++.+.|+|||+|++++.+.
T Consensus 134 ~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 134 AYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp EEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred EEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 999999988520 0 13455 588999999999755 6789999999999999999997654
No 163
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.49 E-value=2.2e-14 Score=121.20 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=84.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CC----C
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE----T 228 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~----~ 228 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.. .. .
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----SDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHTTTCT
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----CCceEEEeCCHHHHHHHhhhccCC
Confidence 457999999999999999987643 3799999999999999999876544 356999999885542 11 1
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++||+|++... ..+...+++.+.++|||||+|++.+..
T Consensus 139 ~~fD~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 139 WQYDLIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp TCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CCccEEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 68999996543 236778999999999999999987655
No 164
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.48 E-value=9e-15 Score=125.78 Aligned_cols=105 Identities=11% Similarity=0.168 Sum_probs=85.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC------C
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------T 228 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------~ 228 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++.+|+.++... .
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----EHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHHHCS
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHhhccCC
Confidence 457999999999999999987643 3799999999999999999877554 45799999998664221 3
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++||+|++... ..+...+++++.++|||||+|++.+.+
T Consensus 135 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 135 HQFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp SCEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CCEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 78999998654 336778999999999999999886544
No 165
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.48 E-value=9.8e-14 Score=119.28 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=82.1
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCC--CCcceeEEEccCCC-CC--CCCC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPD--MHKATNFFCVPLQD-FT--PETG 229 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~--~~~~i~~~~~d~~~-~~--~~~~ 229 (280)
.++.+|||+|||+|.++..++..+.. +|+++|+|+.|++.|++++......... ...++.++++|+.+ ++ ++.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 35679999999999999999988765 7999999999999999876542000000 01478999999987 44 4567
Q ss_pred cEEEEEccchhhcCChh------hHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~ 268 (280)
++|.|++.+.-.+.... ....+++++.++|+|||.|++.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 99999865321110000 0147999999999999999986
No 166
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.48 E-value=4.2e-14 Score=119.36 Aligned_cols=105 Identities=19% Similarity=0.131 Sum_probs=83.8
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC----C-CC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----E-TG 229 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~-~~ 229 (280)
++.+|||+|||+|..+..+++... .+|+++|+++.+++.|++++...++ ..+++++++|+.+... . .+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----NDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 567999999999999999987743 3799999999999999999876544 3569999999865321 1 15
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+||+|++.... .....+++.+.++|+|||++++.+..
T Consensus 133 ~fD~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 133 PFDFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp CCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred CcCEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 79999987552 35678999999999999988776544
No 167
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.48 E-value=4.2e-14 Score=118.44 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=82.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fDl 233 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++.+|..++ +..++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----IDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----GGGEEEEESCHHHHHTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CceEEEEEecHHHHhccCCC-CCE
Confidence 456999999999999999987643 3799999999999999998876433 34689999988654 33336 999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|++... ..+...+++++.++|||||++++.+.
T Consensus 130 v~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 130 LFMDCD-----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEEETT-----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EEEcCC-----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 998743 23667899999999999999987543
No 168
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.48 E-value=8.7e-14 Score=121.60 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=84.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-c-CCcEEEEeCCHHHHHHHHHHcCcC-CCCCCCCCcceeEEEccCCCCCCCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~-~~~v~~vD~S~~~l~~A~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (280)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|++++... + ..++++.++|+.+. .++++|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g------~~~v~~~~~d~~~~-~~~~~f 180 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD------IGNVRTSRSDIADF-ISDQMY 180 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC------CTTEEEECSCTTTC-CCSCCE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC------CCcEEEEECchhcc-CcCCCc
Confidence 456789999999999999999887 2 237999999999999999998653 3 14689999999873 344789
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|+|++ +++ +...+++++.++|||||++++..+.
T Consensus 181 D~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 181 DAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp EEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred cEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99998 344 4458999999999999999998654
No 169
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.48 E-value=8.4e-14 Score=119.88 Aligned_cols=104 Identities=21% Similarity=0.165 Sum_probs=85.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-c-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|++++...++ ..++++..+|+.+. .++++||
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 164 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----DDRVTIKLKDIYEG-IEEENVD 164 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----TTTEEEECSCGGGC-CCCCSEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----CCceEEEECchhhc-cCCCCcC
Confidence 456789999999999999999988 4 33899999999999999999876543 34589999999865 3447899
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|+++ .+ +...+++++.++|+|||.+++....
T Consensus 165 ~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 165 HVILD-----LP--QPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp EEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred EEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEECC
Confidence 99984 33 4447999999999999999997654
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.48 E-value=1.3e-13 Score=117.62 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=81.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC-CCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fDl 233 (280)
..++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.|++++...++ .++++..+|+. .+.+ ..+||+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~-~~~~~~~~fD~ 161 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV------KNVHVILGDGS-KGFPPKAPYDV 161 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGG-GCCGGGCCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC------CCcEEEECCcc-cCCCCCCCccE
Confidence 456679999999999999999887645799999999999999999876433 35889999872 2222 246999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|++..+++++.+ ++.+.|+|||.+++.-+
T Consensus 162 Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 162 IIVTAGAPKIPE--------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EEECSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred EEECCcHHHHHH--------HHHHhcCCCcEEEEEEe
Confidence 999999988772 57899999999999754
No 171
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.48 E-value=4.5e-14 Score=122.18 Aligned_cols=101 Identities=17% Similarity=0.117 Sum_probs=83.7
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|++++..+++ .+++..+|+.+. .++++||+|++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~-------~v~~~~~d~~~~-~~~~~fD~Vv~ 190 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGV-------RPRFLEGSLEAA-LPFGPFDLLVA 190 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTC-------CCEEEESCHHHH-GGGCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCC-------cEEEEECChhhc-CcCCCCCEEEE
Confidence 567999999999999999888777 799999999999999999876533 278888887653 22468999999
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+...+ .+..++..+.++|+|||++++++..
T Consensus 191 n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 191 NLYAE-----LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCcHH-----HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 76544 3568999999999999999997654
No 172
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.48 E-value=5.7e-14 Score=121.91 Aligned_cols=96 Identities=17% Similarity=0.136 Sum_probs=81.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.|++.|+++.. ++.+..+|+.+++..+++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP-----------QVTFCVASSHRLPFSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTSCSBCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC-----------CcEEEEcchhhCCCCCCceeEE
Confidence 356799999999999999998873 3379999999999999998752 4788999998888777899999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++.++. .+++++.++|||||.+++..+.
T Consensus 153 ~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 153 IRIYAP---------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp EEESCC---------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeCCh---------hhHHHHHHhcCCCcEEEEEEcC
Confidence 987652 3588999999999999998654
No 173
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.47 E-value=1.1e-13 Score=121.00 Aligned_cols=106 Identities=18% Similarity=0.212 Sum_probs=84.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..++..... +|+++|+|+.+++.|++++...++ .++++.++|+.+... +++||+|+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~------~~v~~~~~d~~~~~~-~~~fD~Iv 181 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI------KNIHILQSDWFSALA-GQQFAMIV 181 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCSTTGGGT-TCCEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEcchhhhcc-cCCccEEE
Confidence 4569999999999999999876433 799999999999999999876533 368999999876432 47899999
Q ss_pred ccc-------------hhhcCCh----------hhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 236 VQW-------------CIGHLTD----------DDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 236 ~~~-------------~l~~~~~----------~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
++. +++|-+. +.+..+++.+.+.|+|||++++..
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 983 3333321 356789999999999999999863
No 174
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.47 E-value=3.4e-13 Score=115.10 Aligned_cols=105 Identities=14% Similarity=-0.027 Sum_probs=77.1
Q ss_pred ccCCCCccEEEeecCccHHHHHHHHhcC-C-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC---CC
Q 023562 153 ARNNQHLVALDCGSGIGRITKNLLIRYF-N-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PE 227 (280)
Q Consensus 153 ~~~~~~~~VLDlGcG~G~~s~~l~~~~~-~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~ 227 (280)
....++.+|||+|||+|.++..+++... . .|+++|+|+.|++...+.... ..++.++++|+.... ..
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--------r~nv~~i~~Da~~~~~~~~~ 143 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--------RPNIFPLLADARFPQSYKSV 143 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--------CTTEEEEECCTTCGGGTTTT
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--------cCCeEEEEcccccchhhhcc
Confidence 3467789999999999999999987633 2 799999999997654443322 246899999987642 12
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.++||+|++.... + +....+...+.+.|||||.|+++.
T Consensus 144 ~~~~D~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 144 VENVDVLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CCCEEEEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccceEEEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEE
Confidence 3689999988553 2 233345566677999999999873
No 175
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.46 E-value=1.1e-13 Score=122.28 Aligned_cols=112 Identities=18% Similarity=0.234 Sum_probs=80.6
Q ss_pred CCCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fDl 233 (280)
.++.+|||+|||+|.+++.++++. ..+|+++|+|+.|++.|++++...+.. .-...+++++.+|..++. ..+++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSS-CTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccc-cccCCceEEEEChHHHHHhhcCCCccE
Confidence 356799999999999999998763 348999999999999999987542100 001347999999988763 33578999
Q ss_pred EEccchhhcCChhhH--HHHHHHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~ 268 (280)
|++.......+...+ ..+++.+.++|+|||++++.
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 999654333222233 68999999999999999986
No 176
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.46 E-value=2.4e-14 Score=116.48 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=77.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC---CCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~f 231 (280)
..++.+|||+|||. | .+|+|+.|++.|+++... ++++.++|+.++++ ++++|
T Consensus 10 ~~~g~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~~----------~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------S-PVEALKGLVDKLQALTGN----------EGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTT--------------S-CHHHHHHHHHHHHHHTTT----------TSEEEEEEGGGGGGGCCCSSCE
T ss_pred CCCCCEEEEecCCc--------------e-eeeCCHHHHHHHHHhccc----------CcEEEEechhcCccccCCCCCE
Confidence 56788999999996 2 299999999999998643 38899999998875 66899
Q ss_pred EEEEccchhhcC-ChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 232 DVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 232 DlV~~~~~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|+|+++.+++|+ + +...++++++++|||||++++.+.+
T Consensus 65 D~V~~~~~l~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 65 DIILSGLVPGSTTL--HSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEECCSTTCCCC--CCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECChhhhccc--CHHHHHHHHHHHCCCCEEEEEEccc
Confidence 999999999999 6 5679999999999999999997654
No 177
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.46 E-value=1.1e-13 Score=111.49 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=80.4
Q ss_pred CCCccEEEeecCccHHHHHHHHh-cC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--------
Q 023562 156 NQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~-~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------- 225 (280)
.++.+|||+|||+|.++..+++. +. .+++++|+|+ |++. .++++.++|+.+.+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~~~~~~~~~~~~ 83 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFRDELVMKALLER 83 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTTSHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccccchhhhhhhcc
Confidence 45679999999999999999887 33 4899999998 7531 35888999998865
Q ss_pred CCCCcEEEEEccchhhcCChhh---------HHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 226 PETGRYDVIWVQWCIGHLTDDD---------FVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d---------~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
.++++||+|+++.++++..... ...+++++.++|+|||.+++.+...
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 4557999999988887765321 1589999999999999999976543
No 178
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=8.5e-14 Score=121.72 Aligned_cols=105 Identities=18% Similarity=0.107 Sum_probs=87.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..++.... .+|+++|+|+.+++.|++++..+++ .++.++++|+.++ ...++||+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l------~~~~~~~~d~~~~-~~~~~~D~ 189 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL------NNVIPILADNRDV-ELKDVADR 189 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC------SSEEEEESCGGGC-CCTTCEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEECChHHc-CccCCceE
Confidence 34567999999999999999988753 3799999999999999999887644 3678999999888 33578999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
|++.... +...++..+.+.|+|||+++++.+..
T Consensus 190 Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 9988653 34478999999999999999998764
No 179
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.45 E-value=2.1e-13 Score=117.24 Aligned_cols=104 Identities=22% Similarity=0.245 Sum_probs=85.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-c-CCcEEEEeCCHHHHHHHHHHcCcC-CCCCCCCCcceeEEEccCCCCCCCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~-~~~v~~vD~S~~~l~~A~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (280)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|++++... + ..++++..+|+.+.++++++|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g------~~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ------VENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------CCCEEEEESCGGGCCCCTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC------CCCEEEEECchhhcCCCCCCc
Confidence 456789999999999999999987 3 348999999999999999987543 2 246899999998876555789
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
|+|++. .+ +...+++++.++|+|||.+++..+.
T Consensus 168 D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 168 DGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp EEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred CEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999983 33 3447999999999999999998764
No 180
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.45 E-value=4.1e-14 Score=128.84 Aligned_cols=111 Identities=15% Similarity=0.195 Sum_probs=84.9
Q ss_pred HHHHHHHHhccCCCccCCCCccEEEeecC------ccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCC
Q 023562 139 EAFLQMLLSDRFPNARNNQHLVALDCGSG------IGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDM 210 (280)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDlGcG------~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~ 210 (280)
..++..++... ..++.+||||||| +|..+..++++++ .+|+++|+|+.|. . .
T Consensus 203 ~~~Ye~lL~~l-----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-~-------- 262 (419)
T 3sso_A 203 TPHYDRHFRDY-----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-D-------- 262 (419)
T ss_dssp HHHHHHHHGGG-----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-C--------
T ss_pred HHHHHHHHHhh-----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-c--------
Confidence 34555555443 2356799999999 7777777776642 2899999999983 1 1
Q ss_pred CcceeEEEccCCCCCCC------CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 211 HKATNFFCVPLQDFTPE------TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 211 ~~~i~~~~~d~~~~~~~------~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
..+++|+++|+.++++. +++||+|++..+ |+. .+...+|+++.++|||||+|+|.|..+
T Consensus 263 ~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 263 ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred CCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 35799999999987644 579999998754 443 477899999999999999999988763
No 181
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.45 E-value=8.1e-14 Score=120.14 Aligned_cols=104 Identities=14% Similarity=0.169 Sum_probs=84.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-C-C-----C
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-P-----E 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~ 227 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++.+|..++ + . .
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----DHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSGGG
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHHHHHHhccCC
Confidence 457999999999999999988743 3799999999999999999876544 45799999988654 2 1 1
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+++||+|++... ..+...+++.+.++|||||+|++.+.
T Consensus 154 ~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 154 HGSYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp TTCBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CCCEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 478999998643 23667899999999999999987543
No 182
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.45 E-value=7.8e-14 Score=119.26 Aligned_cols=105 Identities=10% Similarity=0.111 Sum_probs=84.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-C--------
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-------- 225 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-------- 225 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..++++..+|+.+. +
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----ENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHCSSC
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHHHHHHHhhccc
Confidence 467999999999999999998753 4899999999999999999876543 34589999887552 1
Q ss_pred ------CC-C-CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 226 ------PE-T-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 226 ------~~-~-~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++ + ++||+|++.... .++..+++.+.++|+|||++++.+.+
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 11 1 689999987543 35668999999999999999986533
No 183
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=1.9e-13 Score=121.57 Aligned_cols=106 Identities=21% Similarity=0.272 Sum_probs=82.6
Q ss_pred CccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCcEEEE
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVI 234 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fDlV 234 (280)
+.+|||||||+|.++..+++.... +|++||+++.|++.|++++... ...+++++.+|..++. ..+++||+|
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~------~~~rv~v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP------RAPRVKIRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC------CTTTEEEEESCHHHHHHTCCTTCEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc------CCCceEEEECcHHHHHhhccCCCCCEE
Confidence 349999999999999999985433 7999999999999999998642 1357999999987652 334789999
Q ss_pred EccchhhcCChhhH--HHHHHHHHHcCCCCcEEEEEe
Q 023562 235 WVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 235 ~~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~e 269 (280)
++....+......+ ..+++.++++|+|||+|++.-
T Consensus 164 i~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 164 IRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp EECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 98643322221222 689999999999999998864
No 184
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.44 E-value=3.9e-14 Score=123.44 Aligned_cols=107 Identities=15% Similarity=0.024 Sum_probs=76.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEE--EccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..++++ ..|+++|+|+ |+..+++.. ........++.++ ++|+.+++ +++||
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~----~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVP----RITESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCC----CCCCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhh----hhhhccCCCeEEEecccCHhHCC--CCCCc
Confidence 446789999999999999988876 4699999998 643322111 0001112368889 89998876 47999
Q ss_pred EEEccchhhcCChhh---H--HHHHHHHHHcCCCCc--EEEEEecc
Q 023562 233 VIWVQWCIGHLTDDD---F--VSFFKRAKVGLKPGG--FFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d---~--~~~l~~~~r~LkpGG--~lii~e~~ 271 (280)
+|+|..+ ++..... . ..+++.+.++||||| .|++....
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999876 4433211 1 138899999999999 99997654
No 185
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.44 E-value=9e-14 Score=123.49 Aligned_cols=112 Identities=15% Similarity=0.178 Sum_probs=81.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--CCCcEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~fD 232 (280)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++...+. .....+++++.+|+.++.. .+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHHhccCCcee
Confidence 356799999999999999998663 34899999999999999998732000 0013578999999877642 357999
Q ss_pred EEEccchhhcCChhhH--HHHHHHHHHcCCCCcEEEEEe
Q 023562 233 VIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~e 269 (280)
+|++.....+.+...+ ..+++.+.++|||||++++..
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9999765544332333 589999999999999999863
No 186
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.44 E-value=1.5e-13 Score=116.22 Aligned_cols=107 Identities=20% Similarity=0.163 Sum_probs=83.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC------CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC---
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~------~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--- 225 (280)
..++.+|||+|||+|.++..+++... .+|+++|+|+.+++.|++++...++... ...++++..+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELL-KIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGG-SSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcccc-ccCCEEEEECChHhccccc
Confidence 34667999999999999999988754 2799999999999999998765421000 0146899999987754
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
...++||+|++...++++ ++.+.+.|+|||++++.-.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEc
Confidence 344789999999888764 3668899999999998743
No 187
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.44 E-value=1.2e-13 Score=124.14 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=85.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCc-ceeEEEccCCCCCCC----CCcE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTPE----TGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~----~~~f 231 (280)
++.+|||+|||+|.++..++..+. +|+++|+|+.|++.|++++..+++ .. +++++++|+.++... .++|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl-----~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGL-----EQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTC-----TTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECcHHHHHHHHHhcCCCc
Confidence 456999999999999999998877 799999999999999999876543 22 489999998775321 3689
Q ss_pred EEEEccch-hhcC-------ChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 232 DVIWVQWC-IGHL-------TDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 232 DlV~~~~~-l~~~-------~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
|+|+++-. +..- ..+++..+++.+.++|+|||+|++...+.
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 99998532 1100 01367789999999999999988775554
No 188
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.43 E-value=1e-13 Score=121.92 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=72.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC---CCCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fDl 233 (280)
++.+|||+|||||.++..+++++..+|+++|+|+.||+.+.++... ...+...++..+. ++..+||+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~r----------v~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDR----------VRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTT----------EEEECSCCGGGCCGGGCTTCCCSE
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcc----------cceecccCceecchhhCCCCCCCE
Confidence 4579999999999999999988777899999999999986543211 0111122332222 22245999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|++..+++++ ..++.++.++|+|||.+++.
T Consensus 155 v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 155 ASIDVSFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 9998887755 47999999999999999886
No 189
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.43 E-value=5e-13 Score=121.02 Aligned_cols=110 Identities=19% Similarity=0.091 Sum_probs=88.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-C-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..++..+ . ..|+|+|+|+.|++.|++++...++ . +++|.++|+.+++.+..+||
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~-----~-~i~~~~~D~~~~~~~~~~~D 274 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL-----S-WIRFLRADARHLPRFFPEVD 274 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC-----T-TCEEEECCGGGGGGTCCCCS
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC-----C-ceEEEeCChhhCccccCCCC
Confidence 4566799999999999999998876 2 3799999999999999999887654 3 79999999999876556799
Q ss_pred EEEccchhhcCC--h----hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 233 VIWVQWCIGHLT--D----DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 233 lV~~~~~l~~~~--~----~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+|+++-.+.... . ..+..+++.+.++|+|||.+++...
T Consensus 275 ~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 275 RILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999974433211 1 1237899999999999999998743
No 190
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.43 E-value=6e-13 Score=113.75 Aligned_cols=104 Identities=22% Similarity=0.279 Sum_probs=85.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++....++ ..++++...|+.+....+++||+|
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNL-----GKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTC-----CTTEEEECSCTTTSCCCTTCBSEE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC-----CCcEEEEEcChhhcccCCCcccEE
Confidence 446779999999999999999988 55799999999999999998866433 356899999998765344689999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+++ .+ +...+++.+.++|+|||.+++..+.
T Consensus 163 ~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 163 FVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp EEC-----SS--CGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred EEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 974 22 4447899999999999999997653
No 191
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.43 E-value=2.8e-13 Score=114.50 Aligned_cols=107 Identities=20% Similarity=0.197 Sum_probs=82.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-C-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|..+..+++.. . .+|+++|+|+.+++.+++++...+..... ..++++..+|+.......++||
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLS-SGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHH-TSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccC-CCcEEEEECCcccCcccCCCcC
Confidence 3466799999999999999998774 3 37999999999999999887653210000 1368899999876554457899
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+|++...++++. +++.++|||||.+++...
T Consensus 154 ~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 154 AIHVGAAAPVVP--------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEECSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHhcCCCcEEEEEEe
Confidence 999998876654 468899999999999743
No 192
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.43 E-value=1.9e-13 Score=123.84 Aligned_cols=101 Identities=14% Similarity=0.271 Sum_probs=86.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
+..+|||+|||+|.++..++++++. +++++|+ +.+++.+++ ..++++..+|+.+ +.+ +||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~--~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------------NENLNFVGGDMFK-SIP--SADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------------CSSEEEEECCTTT-CCC--CCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------------CCCcEEEeCccCC-CCC--CceEEE
Confidence 4579999999999999999988765 7999999 788876543 1348999999977 443 499999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCC---CcEEEEEeccCC
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIAR 273 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~Lkp---GG~lii~e~~~~ 273 (280)
+.+++||+++++...+++++.++|+| ||++++.|.+..
T Consensus 257 ~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 257 LKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred EcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 99999999977778999999999999 999999998754
No 193
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.42 E-value=2.4e-13 Score=116.38 Aligned_cols=103 Identities=12% Similarity=0.115 Sum_probs=83.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-C-C-----C
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-P-----E 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~ 227 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++.+|..++ + . +
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----EHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhccCC
Confidence 457999999999999999988743 3899999999999999999876544 45799999987654 1 1 1
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.++||+|++... ..+...+++.+.++|+|||+|++.+
T Consensus 145 ~~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 145 EGSYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 478999997633 3467789999999999999987754
No 194
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.42 E-value=5.4e-13 Score=110.68 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=75.2
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|+++.. +++++++|+.+++ ++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----------GVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------CCEEEECcHHHCC---CCeeEEE
Confidence 3567999999999999999988755579999999999999999864 4789999998864 6899999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
++..++|..+.....+++++.+.+ |+++++
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE--EEEEEE
T ss_pred ECCCchhccCchhHHHHHHHHHhc--CcEEEE
Confidence 999998887544457899999998 554433
No 195
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.42 E-value=6.3e-14 Score=119.79 Aligned_cols=99 Identities=18% Similarity=0.041 Sum_probs=68.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEE-ccCCCCCCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..+++++..+|+++|+|+.|++.|+++....... ...++.+.. .++....+...+||+++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~D~v~ 113 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVM---EQFNFRNAVLADFEQGRPSFTSIDVSF 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEE---CSCCGGGCCGGGCCSCCCSEEEECCSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccccc---ccceEEEeCHhHcCcCCCCEEEEEEEh
Confidence 45699999999999999999887668999999999999988765431000 011233333 23322112223555554
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
++ + ..+++++.++|||||.+++.
T Consensus 114 ~~-----l-----~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 114 IS-----L-----DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SC-----G-----GGTHHHHHHHSCTTCEEEEE
T ss_pred hh-----H-----HHHHHHHHHhccCCCEEEEE
Confidence 43 2 37999999999999999986
No 196
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.42 E-value=3.8e-13 Score=117.35 Aligned_cols=105 Identities=17% Similarity=0.140 Sum_probs=85.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHcCcC-C-CCCCCCCcceeEEEccCCCCCCCCCc
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPE-N-HMAPDMHKATNFFCVPLQDFTPETGR 230 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~--~~~v~~vD~S~~~l~~A~~~~~~~-~-~~~~~~~~~i~~~~~d~~~~~~~~~~ 230 (280)
..++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++... + + ..++++..+|+.+.+.++++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-----~~~v~~~~~d~~~~~~~~~~ 171 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-----PDNWRLVVSDLADSELPDGS 171 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-----CTTEEEECSCGGGCCCCTTC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-----CCcEEEEECchHhcCCCCCc
Confidence 4567799999999999999998762 237999999999999999987543 2 1 24689999999887665678
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
||+|++. ++ +...+++++.++|+|||.+++....
T Consensus 172 ~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 172 VDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred eeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9999983 33 3337999999999999999997654
No 197
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.42 E-value=2.4e-13 Score=115.93 Aligned_cols=105 Identities=11% Similarity=0.156 Sum_probs=83.5
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC----CCCC--
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPET-- 228 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~-- 228 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..++++..+|+.+. +..+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----AEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHTSSSC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 456999999999999999987643 2799999999999999998866443 35689999986542 2222
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++||+|++... ..++..+++++.++|+|||+|++.+..
T Consensus 147 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 147 PEFDLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp CCEEEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred CCcCEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 68999997654 246778999999999999999886544
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.42 E-value=1.3e-13 Score=116.89 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=81.5
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-------CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-------~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 227 (280)
..++.+|||+|||+|.++..+++... .+|+++|+++.+++.|++++...+.... ...++++..+|+.+....
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML-DSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH-HHTSEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcccc-CCCceEEEECCcccCCCc
Confidence 34567999999999999998887533 3799999999999999998764210000 013688999998763222
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.++||+|++..+++++. +++.+.|||||++++.-.
T Consensus 161 ~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp GCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 36899999999888765 568899999999999743
No 199
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.42 E-value=4.4e-13 Score=117.12 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=85.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..+++. +. .+|+++|+|+.+++.|++++...++ ..++++..+|+.+. .++++||
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 183 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----IERVTIKVRDISEG-FDEKDVD 183 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----GGGEEEECCCGGGC-CSCCSEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHc-ccCCccC
Confidence 456779999999999999999987 42 4899999999999999999876432 35789999998776 3446899
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|+++ .+ +...+++++.++|+|||.+++....
T Consensus 184 ~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 184 ALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred EEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99984 23 4447999999999999999998764
No 200
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.41 E-value=4.6e-13 Score=113.85 Aligned_cols=107 Identities=16% Similarity=0.002 Sum_probs=88.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.++.+|||+|||+|.++..++..+.. +|+++|+++.+++.|++++...++ ..++++.++|+.+...+..+||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl-----~~~I~~~~gD~l~~~~~~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL-----TSKIDVRLANGLSAFEEADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECchhhccccccccCEE
Confidence 35679999999999999999987654 799999999999999999988765 457999999987765443479999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++.+.-. +-+..++....+.|+++|+|+++-+.
T Consensus 95 viaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 95 TICGMGG----RLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp EEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEeCCch----HHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 8765533 24668999999999999999997654
No 201
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.41 E-value=5.3e-13 Score=119.11 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=84.5
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ .++.++++|+.+++..+++||
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------LNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------CSEEEESSCGGGGGGGCCCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CeEEEEECChhhcccccccCC
Confidence 45678999999999999999998743 3799999999999999999876543 368999999988754446899
Q ss_pred EEEcc------chhhcCCh-------hh-------HHHHHHHHHHcCCCCcEEEEEe
Q 023562 233 VIWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 233 lV~~~------~~l~~~~~-------~d-------~~~~l~~~~r~LkpGG~lii~e 269 (280)
+|++. .++++.++ .+ ...+++++.++|||||.++++.
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 99974 22333221 11 2589999999999999999864
No 202
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.40 E-value=2.1e-13 Score=115.40 Aligned_cols=105 Identities=19% Similarity=0.215 Sum_probs=83.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--C--C--C
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P--E--T 228 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~--~--~ 228 (280)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++.+|+.+.. . . .
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----EHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTCT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CCeEEEEEcCHHHHHHHHHhcCCC
Confidence 457999999999999999987643 3899999999999999999876543 357899999875531 1 1 1
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++||+|++... ......+++.+.++|+|||++++.+..
T Consensus 144 ~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 144 GTFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp TCEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 68999998654 235678999999999999999886544
No 203
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.40 E-value=2e-13 Score=119.66 Aligned_cols=107 Identities=11% Similarity=0.026 Sum_probs=76.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEE--EccCCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~fD 232 (280)
..++.+|||+|||+|.++..++++ ..|+++|+|+ |+..++++. ........++.++ ++|+.+++ +++||
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~----~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKP----RLVETFGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCC----CCCCCTTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhch----hhhhhcCCCeEEEeccCcHhhCC--CCCcC
Confidence 446789999999999999988877 4699999998 643332211 0001112378899 89998876 47999
Q ss_pred EEEccchhhcCChh---hH--HHHHHHHHHcCCCCc--EEEEEecc
Q 023562 233 VIWVQWCIGHLTDD---DF--VSFFKRAKVGLKPGG--FFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~~---d~--~~~l~~~~r~LkpGG--~lii~e~~ 271 (280)
+|+|..+ ++.... .. ..+++.+.++||||| .|++....
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9999877 443221 11 137899999999999 99986544
No 204
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.39 E-value=9.3e-13 Score=109.08 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=75.2
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC---CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-------
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~---~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (280)
.++.+|||+|||+|.++..++++.. .+|+++|+|+.+ . ..++.+.++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~--------~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P--------IPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C--------CTTCEEEECCTTTTSSCCC---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C--------CCCceEEEccccchhhhhhccc
Confidence 4567999999999999999998754 479999999831 1 235888999998765
Q ss_pred ------------------CCCCcEEEEEccchhhcCCh--hh-------HHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 ------------------PETGRYDVIWVQWCIGHLTD--DD-------FVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 ------------------~~~~~fDlV~~~~~l~~~~~--~d-------~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+++++||+|++..++++... .+ ...+++++.++|||||.|++...
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 34579999999877665421 11 12489999999999999998643
No 205
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.39 E-value=7e-13 Score=112.46 Aligned_cols=105 Identities=16% Similarity=0.064 Sum_probs=85.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CCCCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fDl 233 (280)
.++.+|||+|||+|.++..++..+.. +|+++|+++.+++.|++++..+++ ..++++..+|..+ ++.. .+||+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~i~~~~~d~l~~l~~~-~~~D~ 87 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL-----KEKIQVRLANGLAAFEET-DQVSV 87 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGG-GCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECchhhhcccC-cCCCE
Confidence 35679999999999999999987654 799999999999999999988765 4579999999843 4322 36999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|++.+.-. +-+..++..+...|+|+|++++.-+
T Consensus 88 IviaG~Gg----~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 88 ITIAGMGG----RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEEECH----HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEEcCCCh----HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 99765422 2457899999999999999998655
No 206
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.39 E-value=6.8e-13 Score=113.70 Aligned_cols=107 Identities=12% Similarity=-0.005 Sum_probs=87.2
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.++.+|||+|||+|.++..++..+.. .|+++|+++.+++.|++++..+++ ..++++..+|+.+...+..+||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~I~v~~gD~l~~~~~~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL-----TEQIDVRKGNGLAVIEKKDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEecchhhccCccccccEE
Confidence 35679999999999999999987654 799999999999999999988765 456999999987755432369999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++...-. +-+..++....+.|+++|+|++.-+.
T Consensus 95 viagmGg----~lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 95 VIAGMGG----TLIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp EEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEeCCch----HHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 8765432 24568999999999999999997653
No 207
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.39 E-value=8.2e-13 Score=116.18 Aligned_cols=105 Identities=12% Similarity=0.032 Sum_probs=80.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcE---EE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY---DV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f---Dl 233 (280)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++ ..+++|+++|+.+.. + ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l-----~~~v~~~~~D~~~~~-~-~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV-----SDRFFVRKGEFLEPF-K-EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTSEEEEESSTTGGG-G-GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcchhhc-c-cccCCCCE
Confidence 4468999999999999999887223799999999999999999877544 335999999997732 2 578 99
Q ss_pred EEccchhh-----------cCChh------hHHHHHHHHH-HcCCCCcEEEEE
Q 023562 234 IWVQWCIG-----------HLTDD------DFVSFFKRAK-VGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~-----------~~~~~------d~~~~l~~~~-r~LkpGG~lii~ 268 (280)
|+++-... |-+.. +-..+++++. +.|+|||++++.
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99972111 22211 1127899999 999999999984
No 208
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.39 E-value=2e-13 Score=119.92 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=80.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcC--CCC---CCCCCcceeEEEccCCCCCCCCCcE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHM---APDMHKATNFFCVPLQDFTPETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~--~~~---~~~~~~~i~~~~~d~~~~~~~~~~f 231 (280)
++.+|||+|||+|.++..++++...+|+++|+++.+++.|++++ .. ++. ......+++++.+|+.++...+++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 46799999999999999998774448999999999999999988 32 100 0001357899999876531114789
Q ss_pred EEEEccchhhcCChhhH--HHHHHHHHHcCCCCcEEEEE
Q 023562 232 DVIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~ 268 (280)
|+|++....+.-+...+ ..+++.+.++|+|||++++.
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99998654321111222 68999999999999999986
No 209
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.39 E-value=2.3e-13 Score=116.47 Aligned_cols=97 Identities=11% Similarity=0.065 Sum_probs=77.6
Q ss_pred CCccEEEeecCccHHHHHHHHh----cC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC---CC-C
Q 023562 157 QHLVALDCGSGIGRITKNLLIR----YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TP-E 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~----~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~-~ 227 (280)
++.+|||||||+|..+..+++. +. .+|+++|+|+.|++.|+.. ..+++++++|+.+. +. .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~-----------~~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD-----------MENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG-----------CTTEEEEECCSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc-----------CCceEEEECcchhHHHHHhhc
Confidence 3569999999999999998876 22 3799999999999887621 24699999999885 32 2
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHH-cCCCCcEEEEEe
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKV-GLKPGGFFVLKE 269 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r-~LkpGG~lii~e 269 (280)
..+||+|++... |. +...++.++.+ +|||||++++.+
T Consensus 150 ~~~fD~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 EMAHPLIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSCSSEEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred cCCCCEEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 247999998654 32 56789999997 999999999965
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.39 E-value=4.1e-13 Score=120.72 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=82.4
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcC--CCCCCCCCcceeEEEccCCCC--CCCCCc
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF--TPETGR 230 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~--~~~~~~~~~~i~~~~~d~~~~--~~~~~~ 230 (280)
.++.+|||+|||+|.++..++++.. .+|+++|+|+.|++.|++++... ++ ...+++++.+|+.++ ...+++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl----~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY----EDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc----CCCcEEEEECCHHHHHHhccCCC
Confidence 3567999999999999999987643 48999999999999999987531 11 024699999997664 123478
Q ss_pred EEEEEccchhhcCChhh--HHHHHHHHHHcCCCCcEEEEE
Q 023562 231 YDVIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (280)
||+|++........... ...+++.+.++|+|||++++.
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99999864321111112 368999999999999999997
No 211
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.38 E-value=5.2e-14 Score=121.32 Aligned_cols=107 Identities=13% Similarity=-0.038 Sum_probs=73.0
Q ss_pred CCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC---CCC---CC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE---TG 229 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~---~~ 229 (280)
++.+|||+|||+|.++..++.+. ..+|+++|+|+.|++.|++++...++ ..+++++++|+.+. +.+ ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-----SDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC-----CccEEEEEcchhhhhhhhhhcccCC
Confidence 46799999999999999888764 24799999999999999999876544 34589999997662 222 25
Q ss_pred cEEEEEccchhhcCCh-------------hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTD-------------DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~-------------~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||+|+++-.+++... .....++..+.++|||||.+.+.
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 8999999855443320 01124556666777777765543
No 212
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.38 E-value=2e-12 Score=107.67 Aligned_cols=100 Identities=19% Similarity=0.173 Sum_probs=82.1
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.+++++...+ .+++++++|+.+++ ++||+|+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK-------GKFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT-------TSEEEEESCGGGCC---CCCSEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC-------CCEEEEECchHHcC---CCCCEEE
Confidence 4567999999999999999988866679999999999999999987642 26899999998864 5899999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
++..+++........+++.+.+.+ ||.+++
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 998877765444567899999998 555443
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.38 E-value=3.9e-13 Score=117.73 Aligned_cols=108 Identities=17% Similarity=0.173 Sum_probs=82.1
Q ss_pred CCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcC--CCCCCCCCcceeEEEccCCCC-CCCCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~--~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD 232 (280)
++.+|||+|||+|.++..++++ +..+|+++|+++.+++.|++++... ++ ...+++++.+|..++ ...+++||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~----~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL----DDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT----TSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCee
Confidence 4679999999999999999876 3458999999999999999987431 11 135799999998664 22347899
Q ss_pred EEEccchhhcCChhh--HHHHHHHHHHcCCCCcEEEEE
Q 023562 233 VIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 233 lV~~~~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (280)
+|++.......+... ...+++.+.++|+|||++++.
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999864432221111 147999999999999999886
No 214
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.38 E-value=5.2e-13 Score=116.86 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=88.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..++.++..+|+++|+|+.+++.+++++..+++ ..+++++++|..++... +.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v-----~~~v~~~~~D~~~~~~~-~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPGE-NIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCCC-SCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEeCcHHHhccc-cCCCEEE
Confidence 46789999999999999999988777899999999999999999988766 56799999999988755 7899999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++... ....++..+.++|||||+|.+.+++.
T Consensus 198 ~~~p~------~~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 198 MGYVV------RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCCC------cHHHHHHHHHHHcCCCCEEEEEeeec
Confidence 77431 22367888889999999998877764
No 215
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.37 E-value=2.3e-13 Score=124.69 Aligned_cols=111 Identities=10% Similarity=0.073 Sum_probs=86.7
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCc-ceeEEEccCCCCCC----CCCcE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTP----ETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~f 231 (280)
++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++..+++ .. +++|+++|+.++.. ...+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~-----~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL-----DMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC-----CCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHHhCCCc
Confidence 4579999999999999999987776899999999999999999887654 23 78999999876421 13589
Q ss_pred EEEEccchh-----hcCCh--hhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 232 DVIWVQWCI-----GHLTD--DDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 232 DlV~~~~~l-----~~~~~--~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
|+|++.-.. .+..+ .++..+++.+.++|+|||+++++.+..
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999985322 12221 345678899999999999999986643
No 216
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.37 E-value=3.4e-13 Score=119.78 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=80.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCc--CCCCCCCCCcceeEEEccCCCC-CCCCCcE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRY 231 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~--~~~~~~~~~~~i~~~~~d~~~~-~~~~~~f 231 (280)
.++.+|||+|||+|..+..++++.. .+|+++|+|+.+++.|++++.. .++ ...+++++.+|+.++ +..+++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~----~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY----SSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc----CCCcEEEEECcHHHHHhhCCCCc
Confidence 3567999999999999999987643 4899999999999999998753 111 035689999997653 2234789
Q ss_pred EEEEccchhhcCChh--hHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~~~~--d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|++....+..+.. ....+++++.++|+|||++++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999986443221111 12579999999999999999864
No 217
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.37 E-value=4.3e-13 Score=117.90 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=84.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fDl 233 (280)
.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.|++++...+.. ....+++++.+|+.++. ..+++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccc--cCCCcEEEEECChHHHHHhCCCCceE
Confidence 356799999999999999998664 348999999999999999998642100 01357899999986642 22478999
Q ss_pred EEccchhhcCChhhH--HHHHHHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~ 268 (280)
|++....++.+...+ ..+++.+.++|+|||++++.
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 998644332222233 68999999999999999987
No 218
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.36 E-value=4.2e-13 Score=119.71 Aligned_cols=111 Identities=15% Similarity=0.232 Sum_probs=82.8
Q ss_pred CCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fDlV 234 (280)
++.+|||+|||+|..+..++++. ..+|+++|+|+.+++.|++++...+. ..-...+++++.+|+.++ +..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-GAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-ccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 55799999999999999998763 34899999999999999998753100 000025689999998764 2234789999
Q ss_pred Eccchhhc---CChhh--HHHHHHHHHHcCCCCcEEEEE
Q 023562 235 WVQWCIGH---LTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 235 ~~~~~l~~---~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (280)
++....+. -+... ...+++.+.++|+|||++++.
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 99755433 11112 368999999999999999986
No 219
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.36 E-value=1.4e-12 Score=117.21 Aligned_cols=109 Identities=16% Similarity=0.078 Sum_probs=80.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cC-CcEEEEeCCHHHHHHHHHHcCcCC----CCC-CCCCcceeEEEccCCCC--C
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPEN----HMA-PDMHKATNFFCVPLQDF--T 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~-~~v~~vD~S~~~l~~A~~~~~~~~----~~~-~~~~~~i~~~~~d~~~~--~ 225 (280)
..++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.|++++...+ +.. .....++++..+|+.+. +
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 456789999999999999999887 44 489999999999999999876311 000 00124799999999886 3
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.++++||+|++... +...+++.+.++|+|||.+++...
T Consensus 183 ~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 183 IKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -----EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred cCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 44568999998533 122489999999999999998754
No 220
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.36 E-value=5.1e-13 Score=122.79 Aligned_cols=110 Identities=13% Similarity=0.056 Sum_probs=87.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC----CCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (280)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++..+++ ..+++++++|+.++.. ..++||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~-----~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV-----EDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CccceEEECCHHHHHHHHHhhCCCCC
Confidence 5679999999999999999987666899999999999999999887644 2378999999876532 246899
Q ss_pred EEEccchhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~-------~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|++.-.....+. .++..++..+.++|+|||+++++.+.
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9998632211111 35678999999999999999888654
No 221
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.36 E-value=4.9e-13 Score=114.78 Aligned_cols=121 Identities=11% Similarity=-0.013 Sum_probs=94.9
Q ss_pred ccchHHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcc
Q 023562 135 IKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKA 213 (280)
Q Consensus 135 ~~~~~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~ 213 (280)
+.....+...++.. ...+.+|||+|||+|-++..++...+. .|+++|+++.|++.+++++...+ ..
T Consensus 116 Lp~lD~fY~~i~~~------i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-------~~ 182 (281)
T 3lcv_B 116 LPHLDEFYRELFRH------LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-------VP 182 (281)
T ss_dssp GGGHHHHHHHHGGG------SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-------CC
T ss_pred hHhHHHHHHHHHhc------cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-------CC
Confidence 33444444444443 234679999999999999988766444 89999999999999999987753 45
Q ss_pred eeEEEccCCCCCCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 214 TNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 214 i~~~~~d~~~~~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.++.+.|+..-+++ ++||+|++.-+++|+.+......+ ++...|+|+|+++-.+.
T Consensus 183 ~~~~v~D~~~~~p~-~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 183 HRTNVADLLEDRLD-EPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp EEEEECCTTTSCCC-SCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred ceEEEeeecccCCC-CCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 78888887665544 789999999999999865544566 89999999999987776
No 222
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.35 E-value=7e-13 Score=118.63 Aligned_cols=109 Identities=22% Similarity=0.312 Sum_probs=81.8
Q ss_pred CCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fDlV 234 (280)
++.+|||+|||+|.++..++++. ..+|+++|+|+.+++.|++++..... .-...+++++.+|+.++. ..+++||+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~--~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC--GYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG--GGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcc--ccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 45799999999999999998663 34899999999999999999865200 000257899999976642 224789999
Q ss_pred EccchhhcCC-hhhH--HHHHHHHHHcCCCCcEEEEE
Q 023562 235 WVQWCIGHLT-DDDF--VSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 235 ~~~~~l~~~~-~~d~--~~~l~~~~r~LkpGG~lii~ 268 (280)
++... .++. ...+ ..+++.+.++|+|||++++.
T Consensus 194 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 194 IVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 98643 1221 1222 68999999999999999985
No 223
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.35 E-value=5.2e-13 Score=119.07 Aligned_cols=110 Identities=20% Similarity=0.280 Sum_probs=79.4
Q ss_pred CCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fDlV 234 (280)
++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.|++++...+. .-...+++++.+|+.++ +..+++||+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~--~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSC--GFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSG--GGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcc--ccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 45799999999999999998763 34899999999999999999864210 00135789999998664 2234789999
Q ss_pred EccchhhcCCh-hhH--HHHHHHHHHcCCCCcEEEEEe
Q 023562 235 WVQWCIGHLTD-DDF--VSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 235 ~~~~~l~~~~~-~d~--~~~l~~~~r~LkpGG~lii~e 269 (280)
++... +++.+ ..+ ..+++.+.++|+|||++++..
T Consensus 186 i~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98653 22222 222 689999999999999999863
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.34 E-value=1.2e-12 Score=113.89 Aligned_cols=99 Identities=16% Similarity=0.095 Sum_probs=79.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
.+.+|||+|||+|..+..++++. .+|+++|+++.|++.|++++..... .....+++++.+|..++. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~--~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHE--VKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHH--HHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhcc--ccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 45799999999999999998775 7899999999999999987653100 001246899999987765 68999998
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.. +++ ..+++.+.++|+|||++++.
T Consensus 146 d~-----~dp--~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 146 LQ-----EPD--IHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp SS-----CCC--HHHHHHHHTTEEEEEEEEEE
T ss_pred CC-----CCh--HHHHHHHHHhcCCCcEEEEE
Confidence 62 222 25999999999999999986
No 225
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.34 E-value=2.6e-12 Score=117.21 Aligned_cols=99 Identities=10% Similarity=0.067 Sum_probs=82.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CCC-CCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP-ETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~fDl 233 (280)
++.+|||+| |+|.++..++..+. .+|+++|+|+.|++.|++++...++ . +++++++|+.+ ++. .+++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~-----~-~v~~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY-----E-DIEIFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC-----C-CEEEECCCTTSCCCTTTSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----C-CEEEEEChhhhhchhhccCCccE
Confidence 467999999 99999999988776 4899999999999999999876543 2 79999999988 553 2468999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEE
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFF 265 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~l 265 (280)
|+++..++.. ....+++++.++|||||.+
T Consensus 245 Vi~~~p~~~~---~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 245 FITDPPETLE---AIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp EEECCCSSHH---HHHHHHHHHHHTBCSTTCE
T ss_pred EEECCCCchH---HHHHHHHHHHHHcccCCeE
Confidence 9998655432 3578999999999999944
No 226
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.34 E-value=9.9e-13 Score=114.96 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=83.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC----CC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ET 228 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~ 228 (280)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ .++++.++|+.+++. ..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------LNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCHHHHHHHHHHTT
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------CcEEEEeCChHhcchhhhhcc
Confidence 45677999999999999999987532 4799999999999999999876543 368999999877643 24
Q ss_pred CcEEEEEccc------hhhcC---Ch-------hhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 229 GRYDVIWVQW------CIGHL---TD-------DDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 229 ~~fDlV~~~~------~l~~~---~~-------~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
++||+|++.- ++.+- +. .....+++.+.++|||||.++++.
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 6899999862 22110 00 244689999999999999998864
No 227
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.33 E-value=2.6e-12 Score=109.30 Aligned_cols=103 Identities=12% Similarity=-0.060 Sum_probs=86.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.++.+|||+|||+|.++..+. ....++++|+++.|++.+++++... +.+..+...|+..-+++ ++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~-------g~~~~~~v~D~~~~~~~-~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK-------DWDFTFALQDVLCAPPA-EAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT-------TCEEEEEECCTTTSCCC-CBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc-------CCCceEEEeecccCCCC-CCcchHH
Confidence 357799999999999999877 4448999999999999999997654 45788999998877665 6999999
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+.-++||+.+.+....+ ++...|+++|+++-.+
T Consensus 174 llk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 174 IFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp EESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 99999998765444455 8888999999888777
No 228
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.33 E-value=9.1e-13 Score=129.29 Aligned_cols=109 Identities=16% Similarity=0.158 Sum_probs=88.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++..+++. ..+++++++|+.++ +...++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~----~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----GRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----STTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEEecCHHHHHHhcCCCccEEE
Confidence 45799999999999999998877778999999999999999999876541 14699999998774 22347899999
Q ss_pred ccch-----------hhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 236 VQWC-----------IGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 236 ~~~~-----------l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+.-. +... .++..+++.+.++|+|||+++++-+.
T Consensus 615 ~DPP~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 8632 1111 36788999999999999999987665
No 229
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.33 E-value=1.2e-12 Score=120.45 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=87.2
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC----CCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (280)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++..+++. ..+++++++|+.++.. ...+||
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~----~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD----LSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHhcCCCCC
Confidence 45799999999999999999887668999999999999999998765320 1268999999877532 136899
Q ss_pred EEEccchh---------hcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 233 VIWVQWCI---------GHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 233 lV~~~~~l---------~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+|++.-.. ... ..+..++..+.+.|+|||+++++.+..
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGAC--RGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCC--THHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhHHHHHH--HHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99987321 111 367789999999999999999986643
No 230
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.32 E-value=1.3e-12 Score=115.64 Aligned_cols=108 Identities=18% Similarity=0.163 Sum_probs=79.3
Q ss_pred CCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCc--CCCCCCCCCcceeEEEccCCCC-CCCCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~--~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD 232 (280)
.+.+|||+|||+|..+..++++. ..+|+++|+|+.+++.|++++.. .++ ...+++++.+|+.++ +..+++||
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~----~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF----DDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCce
Confidence 45799999999999999998763 35899999999999999998743 111 025789999997653 22346899
Q ss_pred EEEccchhhcCCh-h--hHHHHHHHHHHcCCCCcEEEEE
Q 023562 233 VIWVQWCIGHLTD-D--DFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 233 lV~~~~~l~~~~~-~--d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+|++...-..+.+ . ....+++.+.++|+|||++++.
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9998533210211 1 1268999999999999999986
No 231
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.31 E-value=1.2e-11 Score=115.54 Aligned_cols=110 Identities=12% Similarity=0.071 Sum_probs=86.5
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCc
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~ 230 (280)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ .++.+.++|+.+++ +++++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------KIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCTTCCSSSSCSSC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------CcEEEEEcChhhcchhhccCC
Confidence 45677999999999999999988643 3799999999999999999876543 36899999998875 33368
Q ss_pred EEEEEc------cchhhcCChh-------hH-------HHHHHHHHHcCCCCcEEEEEec
Q 023562 231 YDVIWV------QWCIGHLTDD-------DF-------VSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 231 fDlV~~------~~~l~~~~~~-------d~-------~~~l~~~~r~LkpGG~lii~e~ 270 (280)
||+|++ ..++++.++. ++ ..+++.+.++|||||.+++++.
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999995 2344444421 11 5789999999999999998753
No 232
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.30 E-value=1.3e-12 Score=119.64 Aligned_cols=108 Identities=20% Similarity=0.140 Sum_probs=85.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC----CCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (280)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++..+++ .+++++++|+.++.. ..++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~------~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGL------GNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTC------TTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CCceEEECCHHHHHHHHHhcCCCee
Confidence 5679999999999999999887 55799999999999999999887654 348999999877532 146899
Q ss_pred EEEccchhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 233 lV~~~~~l~~~~~-------~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|++.-.....+. ..+..++..+.++|+|||+++++.+.
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9998532111110 35678999999999999999998764
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.30 E-value=4.1e-12 Score=111.78 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=77.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++....+. ..+++++++|+.+++.+ +||+|
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~fD~v 97 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPV-----ASKLQVLVGDVLKTDLP--FFDTC 97 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEESCTTTSCCC--CCSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEEcceecccch--hhcEE
Confidence 44667999999999999999998865 699999999999999999865432 25799999999887654 79999
Q ss_pred EccchhhcCChhhHHHHH--------------HHH--HHcCCCCcEEE
Q 023562 235 WVQWCIGHLTDDDFVSFF--------------KRA--KVGLKPGGFFV 266 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l--------------~~~--~r~LkpGG~li 266 (280)
+++..++..+ +.+..++ +++ +++|+|||.++
T Consensus 98 v~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9975443222 2222332 223 36899999764
No 234
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.28 E-value=7.4e-12 Score=114.19 Aligned_cols=106 Identities=17% Similarity=0.125 Sum_probs=82.8
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..++..+.. +|+|+|+|+.|++.|++++...++ ..++++.++|+.+++.++++||+|+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl-----~~~i~~~~~D~~~~~~~~~~fD~Ii 291 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV-----LDKIKFIQGDATQLSQYVDSVDFAI 291 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC-----GGGCEEEECCGGGGGGTCSCEEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCcccCCcCEEE
Confidence 5679999999999999999887653 799999999999999999887654 4579999999999876668999999
Q ss_pred ccchhhcCC-----hhh-HHHHHHHHHHcCCCCcEEEEE
Q 023562 236 VQWCIGHLT-----DDD-FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 236 ~~~~l~~~~-----~~d-~~~~l~~~~r~LkpGG~lii~ 268 (280)
++..++.-. -.+ +..+++.+.++| +|+.++++
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 985533211 012 367899999988 44444444
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=2.7e-12 Score=105.77 Aligned_cols=99 Identities=22% Similarity=0.250 Sum_probs=72.4
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC----------CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEE-EccCCCC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQDF 224 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~----------~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~-~~d~~~~ 224 (280)
.++.+|||+|||+|.++..+++... .+|+++|+|+.+ . ..++++. .+|+.+.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~--------~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P--------LEGATFLCPADVTDP 83 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C--------CTTCEEECSCCTTSH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c--------CCCCeEEEeccCCCH
Confidence 4567999999999999999998743 479999999831 0 1347788 8887654
Q ss_pred C--------CCCCcEEEEEccchhhc----CChh-----hHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 225 T--------PETGRYDVIWVQWCIGH----LTDD-----DFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 225 ~--------~~~~~fDlV~~~~~l~~----~~~~-----d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
. .++++||+|++...++. ..+. ....+++++.++|||||.|++....
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 2 22358999998654432 1211 0147899999999999999998653
No 236
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=3.8e-12 Score=116.84 Aligned_cols=107 Identities=11% Similarity=-0.043 Sum_probs=81.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fDlV~ 235 (280)
++.+|||+|||+|.++..++..+.. |+++|+|+.|++.|++++..+++ ..++.++|+.++. ...++||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~-------~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGL-------RVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTC-------CCEEEESCHHHHHHTCCCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCC-------CCcEEEccHHHHHHHhcCCCCEEE
Confidence 4789999999999999999988776 99999999999999999877644 2356688876642 1124599999
Q ss_pred ccchhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 236 VQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 236 ~~~~l~~~~~-------~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+.-....-.. .++..++..+.++|+|||++++..+.
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 8633111000 25578999999999999999977654
No 237
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.27 E-value=5.1e-12 Score=113.68 Aligned_cols=100 Identities=9% Similarity=0.047 Sum_probs=83.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++.. +. +..+|+++|+|+.+++.|++++..+++ ..+++++++|+.++. ++||+|++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l-----~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKL-----EHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECChHHhc---CCCcEEEE
Confidence 567999999999999998 75 566899999999999999999887654 347999999998876 78999998
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
.... ....++..+.++|+|||++++.++..
T Consensus 265 dpP~------~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 265 NLPK------FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CCTT------TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CCcH------hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 6321 11278999999999999999987643
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.27 E-value=8.4e-12 Score=112.52 Aligned_cols=106 Identities=13% Similarity=0.160 Sum_probs=84.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC------CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG 229 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~------~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 229 (280)
.++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.+....+ .++++.++|...... .+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-------~~~~i~~~D~l~~~~-~~ 200 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-------QKMTLLHQDGLANLL-VD 200 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-------CCCEEEESCTTSCCC-CC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-------CCceEEECCCCCccc-cC
Confidence 3567999999999999998887653 479999999999999999876542 257889998765432 36
Q ss_pred cEEEEEccchhhcCChhhH----------------HHHHHHHHHcCCCCcEEEEEe
Q 023562 230 RYDVIWVQWCIGHLTDDDF----------------VSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~----------------~~~l~~~~r~LkpGG~lii~e 269 (280)
+||+|+++-.+++++.++. ..+++.+.+.|+|||++++.-
T Consensus 201 ~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 201 PVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999977766653332 268999999999999998875
No 239
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.25 E-value=1.7e-11 Score=113.85 Aligned_cols=108 Identities=17% Similarity=0.062 Sum_probs=85.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~f 231 (280)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ ++.+.++|+.+++ .++++|
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-------~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-------KATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-------CCEEEECCTTCTHHHHTTCCE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-------CeEEEeCchhhchhhcccCCC
Confidence 45678999999999999999998765 3799999999999999999876532 4788999988775 344689
Q ss_pred EEEEcc------chhhcCChh-------hH-------HHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQ------WCIGHLTDD-------DF-------VSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~------~~l~~~~~~-------d~-------~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|++. .++++.++. ++ ..+++.+.++|||||++++++
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999952 344444421 11 488999999999999999875
No 240
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.25 E-value=5.9e-12 Score=104.29 Aligned_cols=97 Identities=15% Similarity=0.034 Sum_probs=71.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC--------
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-------- 227 (280)
.++.+|||+|||+|.++..++++ ...|+++|+++.. . ..+++++++|+.+....
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~---------~--------~~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME---------E--------IAGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC---------C--------CTTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc---------c--------CCCeEEEEccccCHHHHHHHHHHhh
Confidence 46789999999999999998877 4479999998741 1 24689999999876411
Q ss_pred ---CCcEEEEEccchhh--------cCCh-hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 228 ---TGRYDVIWVQWCIG--------HLTD-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 ---~~~fDlV~~~~~l~--------~~~~-~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.++||+|++..... +... .....+++.+.++|||||.|++...
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 04899999864321 1100 1235789999999999999998654
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.25 E-value=2e-11 Score=114.80 Aligned_cols=107 Identities=14% Similarity=0.136 Sum_probs=84.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-CCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fDl 233 (280)
++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ .++.+.++|+.+++. .+++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------SNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCCHHHhhhhccccCCE
Confidence 678999999999999999998743 3799999999999999999876543 368899999988653 3478999
Q ss_pred EEcc------chhhcCCh-------hh-------HHHHHHHHHHcCCCCcEEEEEe
Q 023562 234 IWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 234 V~~~------~~l~~~~~-------~d-------~~~~l~~~~r~LkpGG~lii~e 269 (280)
|++. .++.+.++ .+ ...+++++.++|||||+++++.
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9972 23333221 11 2478999999999999998864
No 242
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.22 E-value=3.3e-12 Score=113.45 Aligned_cols=104 Identities=10% Similarity=-0.027 Sum_probs=72.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeC----CHHHHHHHHHHcCcCCCCCCCCCcceeEEEc-cCCCCCCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP----VSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~----S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~ 229 (280)
..++.+|||+|||+|.++..++++ ..|+++|+ ++.+++.++ .... ...++.+.++ |+..++ ++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~------~~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTY------GWNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCST------TGGGEEEECSCCTTTSC--CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhc------CCCCeEEEeccccccCC--cC
Confidence 345689999999999999988876 36999999 565442110 1100 0246889988 887765 36
Q ss_pred cEEEEEccchhh---cCChhh-HHHHHHHHHHcCCCCcEEEEEec
Q 023562 230 RYDVIWVQWCIG---HLTDDD-FVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 230 ~fDlV~~~~~l~---~~~~~d-~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+||+|+|..+++ +..+.. ...++..+.++|||||.|++...
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 899999976653 211111 12588999999999999998643
No 243
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.22 E-value=9.5e-12 Score=116.18 Aligned_cols=108 Identities=14% Similarity=0.065 Sum_probs=83.5
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-CCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~f 231 (280)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ . +.+.++|+.++.. .+++|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------P-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------C-CEEECSCHHHHHHHHCSCE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------e-EEEEECCHHHhhhhccccC
Confidence 45678999999999999999997743 2799999999999999999887644 2 7888888876641 24789
Q ss_pred EEEEcc------chhhcCCh-------hh-------HHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~------~~l~~~~~-------~d-------~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|++. .++.+-++ ++ ...+++.+.++|||||+++++.
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999952 23333221 11 2679999999999999998863
No 244
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.17 E-value=8.1e-11 Score=109.04 Aligned_cols=99 Identities=21% Similarity=0.211 Sum_probs=77.6
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
++.+|||+|||+|.++..+++.+ .+|+++|+|+.|++.|++++..+++ . ++|+++|+.++... +||+|++
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl------~-v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNV------D-AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTC------C-EEEEECCTTTCCCT--TCSEEEE
T ss_pred CCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECChHHcCcc--CCCEEEE
Confidence 45799999999999999998764 4799999999999999999876543 2 89999999887533 8999998
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.-....+. ..+++.+. .|+|||+++++-|
T Consensus 360 dPPr~g~~----~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 360 DPPRAGLH----PRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp CCCTTCSC----HHHHHHHH-HHCCSEEEEEESC
T ss_pred cCCccchH----HHHHHHHH-hcCCCcEEEEECC
Confidence 65432222 24555554 4899999999844
No 245
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.14 E-value=3.5e-11 Score=112.16 Aligned_cols=109 Identities=13% Similarity=0.020 Sum_probs=83.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~f 231 (280)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ .++.+.+.|..++. ..+++|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~------~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV------SNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC------SSEEEECCCHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEeCCHHHhhhhccccC
Confidence 45678999999999999999987633 3799999999999999999887654 35888888887654 124789
Q ss_pred EEEEcc------chhhcCCh-------h-------hHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQ------WCIGHLTD-------D-------DFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~------~~l~~~~~-------~-------d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|++. .++.+-++ + ....+++.+.++|||||.++++.
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999963 22222111 0 12378999999999999998753
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.12 E-value=1.3e-10 Score=107.99 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=78.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCc
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (280)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.|++.|++++..+++ .+++|+++|+.+.. ..+++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~------~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGL------QNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCTTSCCSSSGGGTTC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEECCHHHHhhhhhhhcCC
Confidence 345679999999999999999877 44799999999999999999876543 37999999998732 23468
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
||+|+++-....+ ..+++.+.+ ++|+++++++-|
T Consensus 357 fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvsc~ 390 (433)
T 1uwv_A 357 FDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVSCN 390 (433)
T ss_dssp CSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEESC
T ss_pred CCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEECC
Confidence 9999986442221 245555544 789999988754
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.12 E-value=9.1e-11 Score=103.82 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=71.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.+++++...++ .+++++++|+.+++. .+||+|
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~------~~v~~~~~D~~~~~~--~~~D~V 110 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGY------NNLEVYEGDAIKTVF--PKFDVC 110 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTC------CCEEC----CCSSCC--CCCSEE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCC------CceEEEECchhhCCc--ccCCEE
Confidence 44667999999999999999987744 799999999999999998754321 468899999988764 489999
Q ss_pred EccchhhcCChhhHHHHH---------------HHHHHcCCCCc
Q 023562 235 WVQWCIGHLTDDDFVSFF---------------KRAKVGLKPGG 263 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l---------------~~~~r~LkpGG 263 (280)
+++...+ +..+.+..++ +.+.|+++|+|
T Consensus 111 v~n~py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 111 TANIPYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp EEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred EEcCCcc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 9975543 3333444444 34667888877
No 248
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.11 E-value=3.7e-10 Score=96.96 Aligned_cols=73 Identities=23% Similarity=0.303 Sum_probs=59.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC-CcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fDl 233 (280)
..++.+|||+|||+|.++..+++++ .+|+++|+|+.|++.+++++.. ..+++++++|+.++++++ .+|+
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~~~- 97 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD--------HDNFQVLNKDILQFKFPKNQSYK- 97 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT--------CCSEEEECCCGGGCCCCSSCCCE-
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc--------CCCeEEEEChHHhCCcccCCCeE-
Confidence 4466799999999999999999887 4699999999999999998864 246999999998887653 4564
Q ss_pred EEcc
Q 023562 234 IWVQ 237 (280)
Q Consensus 234 V~~~ 237 (280)
|+++
T Consensus 98 vv~n 101 (244)
T 1qam_A 98 IFGN 101 (244)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4444
No 249
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.10 E-value=1e-10 Score=105.39 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=80.8
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCC--CCCCCCcceeEEEccCCCCCC----CCC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH--MAPDMHKATNFFCVPLQDFTP----ETG 229 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~--~~~~~~~~i~~~~~d~~~~~~----~~~ 229 (280)
.++.+||++|||+|..++.++++...+|++||+++.+++.|++++...+- ...+...+++++.+|...+.. ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 35789999999999999999987767899999999999999999864211 000111368999999877532 247
Q ss_pred cEEEEEccchh-hc-CChh--hHHHHHHHH----HHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCI-GH-LTDD--DFVSFFKRA----KVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l-~~-~~~~--d~~~~l~~~----~r~LkpGG~lii~ 268 (280)
+||+|++...- .. ..+. --..|++.+ .++|+|||++++-
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 89999986432 10 0111 114566666 9999999999875
No 250
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.10 E-value=2e-10 Score=105.06 Aligned_cols=108 Identities=17% Similarity=0.132 Sum_probs=84.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC---------------------------------------CcEEEEeCCHHHHHH
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~---------------------------------------~~v~~vD~S~~~l~~ 195 (280)
..++.+|||.+||+|.+++.++..+. ..|+|+|+|+.|++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 44567999999999999998876532 259999999999999
Q ss_pred HHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccchhh-cCC-hhhHHHHHHHHHHcCCC--CcEEEEE
Q 023562 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HLT-DDDFVSFFKRAKVGLKP--GGFFVLK 268 (280)
Q Consensus 196 A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~~l~-~~~-~~d~~~~l~~~~r~Lkp--GG~lii~ 268 (280)
|++++...++ ..+++|.++|+.+++.+ .+||+|+++-.+. .+. .+++..+++.+.+.||+ ||.+++.
T Consensus 273 Ar~Na~~~gl-----~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 343 (385)
T 3ldu_A 273 ARENAEIAGV-----DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLI 343 (385)
T ss_dssp HHHHHHHHTC-----GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 9999887654 34799999999998765 6899999985432 222 24667788888888876 7776664
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.09 E-value=2.7e-10 Score=104.53 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=82.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC---------------------------------------CcEEEEeCCHHHHHH
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~---------------------------------------~~v~~vD~S~~~l~~ 195 (280)
..++..|||.+||+|.+++..+.... ..|+|+|+|+.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 34567899999999999988776543 149999999999999
Q ss_pred HHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccchhh-cCC-hhhHHHHHHHHHHcCCC--CcEEEEE
Q 023562 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIG-HLT-DDDFVSFFKRAKVGLKP--GGFFVLK 268 (280)
Q Consensus 196 A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~~l~-~~~-~~d~~~~l~~~~r~Lkp--GG~lii~ 268 (280)
|++++...++ ..++++.++|+.+++.+ .+||+|+++-.+. .+. ..++..+++.+.+.||+ ||.+++.
T Consensus 279 Ar~Na~~~gl-----~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 349 (393)
T 3k0b_A 279 AKQNAVEAGL-----GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVL 349 (393)
T ss_dssp HHHHHHHTTC-----TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999887655 34689999999998765 5899999994321 122 24566777777777766 8777664
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.08 E-value=6.7e-10 Score=101.52 Aligned_cols=108 Identities=13% Similarity=0.065 Sum_probs=85.1
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC---------------------------------------cEEEEeCCHHHHHH
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN---------------------------------------EVDLLEPVSHFLDA 195 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~---------------------------------------~v~~vD~S~~~l~~ 195 (280)
..++..|||.+||+|.+++..+....+ .|+|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 345678999999999999887765331 49999999999999
Q ss_pred HHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEccch--hhcCChhhHHHHHHHHHHcCCC--CcEEEEE
Q 023562 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWC--IGHLTDDDFVSFFKRAKVGLKP--GGFFVLK 268 (280)
Q Consensus 196 A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~~~--l~~~~~~d~~~~l~~~~r~Lkp--GG~lii~ 268 (280)
|++++...++ ...+++.++|+.+++.+ .+||+|+++-- ...-...++..+++.+.+.||+ ||.+++.
T Consensus 272 Ar~Na~~~gl-----~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 272 ARKNAREVGL-----EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFIL 342 (384)
T ss_dssp HHHHHHHTTC-----TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 9999987655 45699999999998765 58999999933 3222335778888888888877 8877665
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.08 E-value=2.3e-10 Score=106.61 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=83.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc--------------CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~--------------~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d 220 (280)
+.++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.|+.+....++. ..++++.++|
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~----~~~~~i~~gD 244 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG----TDRSPIVCED 244 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC----SSCCSEEECC
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC----cCCCCEeeCC
Confidence 3456799999999999998877642 236999999999999999887654331 0157789999
Q ss_pred CCCCCCCCCcEEEEEccchhhcCChhh---------------HHHHHHHHHHcCCCCcEEEEEe
Q 023562 221 LQDFTPETGRYDVIWVQWCIGHLTDDD---------------FVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 221 ~~~~~~~~~~fDlV~~~~~l~~~~~~d---------------~~~~l~~~~r~LkpGG~lii~e 269 (280)
....+.. .+||+|+++-.+.+..+.+ ...+++.+.+.|+|||.+.+.-
T Consensus 245 ~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 245 SLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp TTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 8776544 4899999996665533211 2479999999999999998764
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.08 E-value=6.6e-12 Score=107.86 Aligned_cols=103 Identities=19% Similarity=0.187 Sum_probs=76.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC-CcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fDl 233 (280)
..++.+|||+|||+|.++..+++.+ .+|+++|+|+.|++.++++... ..+++++++|+.+++.+. ++| .
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL--------NTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT--------CSEEEECCSCCTTTTCCCSSEE-E
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc--------CCceEEEECChhhcCcccCCCc-E
Confidence 4466799999999999999999886 5799999999999998877652 357899999999887553 689 6
Q ss_pred EEccchhhcCChhhHH----------HHH----HHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTDDDFV----------SFF----KRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~----------~~l----~~~~r~LkpGG~lii~ 268 (280)
|+++-.. +.+...+. .++ +.+.++|+|||.+.+.
T Consensus 97 vv~n~Py-~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 97 IVGNIPY-HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp EEEECCS-SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred EEEeCCc-cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 6665221 11111111 334 6799999999987764
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.07 E-value=1.9e-10 Score=105.97 Aligned_cols=97 Identities=18% Similarity=0.131 Sum_probs=74.4
Q ss_pred CCccEEEeecCccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~--~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
++.+|||+|||+|.++..++++. ..+++|+|+++.+++.| .+++++++|+.++... ++||+|
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~~~~~~~~D~~~~~~~-~~fD~I 102 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------PWAEGILADFLLWEPG-EAFDLI 102 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------TTEEEEESCGGGCCCS-SCEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------CCCcEEeCChhhcCcc-CCCCEE
Confidence 45699999999999999998763 34899999999999755 2478899998877543 689999
Q ss_pred Eccchhhc----------CChhh-----------------HHHHHHHHHHcCCCCcEEEEEe
Q 023562 235 WVQWCIGH----------LTDDD-----------------FVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 235 ~~~~~l~~----------~~~~d-----------------~~~~l~~~~r~LkpGG~lii~e 269 (280)
+++-.+.. +.++. ...+++.+.++|+|||.+++.-
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99722211 22211 2367999999999999988863
No 256
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.04 E-value=5.1e-10 Score=98.73 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=65.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+|||+|.++..+++.+ .+|+++|+++.|++.+++++.. ..+++++++|+.++++++.+||.|
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~--------~~~v~vi~gD~l~~~~~~~~fD~I 118 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKEL--------YNNIEIIWGDALKVDLNKLDFNKV 118 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHH--------CSSEEEEESCTTTSCGGGSCCSEE
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhcc--------CCCeEEEECchhhCCcccCCccEE
Confidence 4567799999999999999999874 4699999999999999998753 357999999999887666689999
Q ss_pred Eccchh
Q 023562 235 WVQWCI 240 (280)
Q Consensus 235 ~~~~~l 240 (280)
+++..+
T Consensus 119 v~NlPy 124 (295)
T 3gru_A 119 VANLPY 124 (295)
T ss_dssp EEECCG
T ss_pred EEeCcc
Confidence 988554
No 257
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.97 E-value=1.4e-09 Score=95.66 Aligned_cols=95 Identities=12% Similarity=0.037 Sum_probs=68.7
Q ss_pred CCCCccEEEeec------CccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeE-EEccCCCCC
Q 023562 155 NNQHLVALDCGS------GIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF-FCVPLQDFT 225 (280)
Q Consensus 155 ~~~~~~VLDlGc------G~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~-~~~d~~~~~ 225 (280)
..++.+|||+|| |+|. ..+++... ..|+++|+|+. + .++++ +++|+.+++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v-----------~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V-----------SDADSTLIGDCATVH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B-----------CSSSEEEESCGGGCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C-----------CCCEEEEECccccCC
Confidence 556789999999 5576 33444433 37999999987 1 14778 999998876
Q ss_pred CCCCcEEEEEccchhh--------cCC-hhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 226 PETGRYDVIWVQWCIG--------HLT-DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~--------~~~-~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++ ++||+|+++...+ +.. ...+..+++.+.++|||||.|++....
T Consensus 120 ~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 120 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 54 6899999874321 111 123468999999999999999997543
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.97 E-value=2.3e-09 Score=93.43 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=69.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC-CcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fDl 233 (280)
..++ +|||+|||+|.++..+++.+. +|+++|+++.|++.+++++.. .+++++++|+.++++++ ..+|.
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~---------~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG---------LPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT---------SSEEEEESCGGGSCGGGSCTTEE
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC---------CCEEEEECChhhCChhhccCccE
Confidence 4456 999999999999999998874 699999999999999998763 46899999998887543 26899
Q ss_pred EEccchhhcCChhhHHHHHHH
Q 023562 234 IWVQWCIGHLTDDDFVSFFKR 254 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~ 254 (280)
|+++... +++.+-+..++..
T Consensus 114 iv~NlPy-~iss~il~~ll~~ 133 (271)
T 3fut_A 114 LVANLPY-HIATPLVTRLLKT 133 (271)
T ss_dssp EEEEECS-SCCHHHHHHHHHH
T ss_pred EEecCcc-cccHHHHHHHhcC
Confidence 8888654 4454444455544
No 259
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.94 E-value=4.2e-09 Score=93.53 Aligned_cols=107 Identities=10% Similarity=-0.039 Sum_probs=77.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC---C
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---G 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~--~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---~ 229 (280)
..++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++...++ .++.++++|+.++.... .
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------SCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGSCTTCGGGT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEeCChHhcCccccccC
Confidence 4567899999999999999998763 23799999999999999999887543 46899999988765332 4
Q ss_pred cEEEEEcc------chhhcCCh---------hh-------HHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQ------WCIGHLTD---------DD-------FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~------~~l~~~~~---------~d-------~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||.|++. .++..-++ .+ ...+++.+.++|+ ||+++.+
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYs 233 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYS 233 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEE
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEE
Confidence 79999962 22322111 11 1356888888887 8987764
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.93 E-value=2e-09 Score=93.08 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=61.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC----CCc
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGR 230 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~ 230 (280)
..++.+|||+|||+|.++..+++++ .+|+++|+++.|++.+++++.. ..+++++++|+.+++++ .++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~ 97 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ--------QKNITIYQNDALQFDFSSVKTDKP 97 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT--------CTTEEEEESCTTTCCGGGSCCSSC
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh--------CCCcEEEEcchHhCCHHHhccCCC
Confidence 4567799999999999999999876 4799999999999999999865 35799999999988643 257
Q ss_pred EEEEEccch
Q 023562 231 YDVIWVQWC 239 (280)
Q Consensus 231 fDlV~~~~~ 239 (280)
|| |+++.-
T Consensus 98 ~~-vv~NlP 105 (255)
T 3tqs_A 98 LR-VVGNLP 105 (255)
T ss_dssp EE-EEEECC
T ss_pred eE-EEecCC
Confidence 88 666643
No 261
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.93 E-value=5.5e-10 Score=102.17 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=80.8
Q ss_pred CCccEEEeecCccHHHHHHHHh--cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcc-eeEEEccCCCCC--CCCCcE
Q 023562 157 QHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCVPLQDFT--PETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~--~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~--~~~~~f 231 (280)
++.+|||++||+|.++..++.+ +...|+++|+++.+++.++++++.+++ ..+ ++++++|+.++. ...++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl-----~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI-----PEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CCceEEEEeCCHHHHHHHhhCCCC
Confidence 4579999999999999999886 335799999999999999999988765 334 889999975542 113589
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|++.- .. ....++..+.+.|+|||+++++-
T Consensus 127 D~V~lDP-~g-----~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDP-FG-----TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECC-Cc-----CHHHHHHHHHHHhCCCCEEEEEe
Confidence 9999865 11 12368999999999999888863
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.92 E-value=5.2e-10 Score=102.09 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=78.6
Q ss_pred CCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcC---------------CCCCCCCCcceeEEEcc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPE---------------NHMAPDMHKATNFFCVP 220 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~---------------~~~~~~~~~~i~~~~~d 220 (280)
++.+|||+|||+|..+..++.+. ..+|+++|+++.+++.+++++..+ ++ .++++.++|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------~~i~v~~~D 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------KTIVINHDD 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------SEEEEEESC
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------CceEEEcCc
Confidence 35689999999999999999873 347999999999999999998765 32 238899999
Q ss_pred CCCCCC-CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 221 LQDFTP-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 221 ~~~~~~-~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+.++.. ..++||+|++.- .. ....++..+.+.|+|||+++++
T Consensus 121 a~~~~~~~~~~fD~I~lDP-~~-----~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDP-FG-----SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHHHHHSTTCEEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCC-CC-----CHHHHHHHHHHhcCCCCEEEEE
Confidence 866521 125899999542 21 1247899999999999988886
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.92 E-value=3.5e-10 Score=102.87 Aligned_cols=97 Identities=14% Similarity=0.082 Sum_probs=71.1
Q ss_pred CccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--CCC-------
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PET------- 228 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~------- 228 (280)
+.+|||+|||+|.++..+++ ...+|+++|+|+.+++.|++++..+++ .+++|+++|+.++. ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~------~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI------DNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC------CSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEECCHHHHHHHHhhccccccc
Confidence 46899999999999998775 455799999999999999999877543 37899999987642 111
Q ss_pred -------CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 229 -------GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 229 -------~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.+||+|++.-.-. .+..++.+.|+++|.+++..
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~--------g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRS--------GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTT--------CCCHHHHHHHTTSSEEEEEE
T ss_pred cccccccCCCCEEEECcCcc--------ccHHHHHHHHhCCCEEEEEE
Confidence 3799998753211 12334555566777777653
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=7.1e-10 Score=96.02 Aligned_cols=108 Identities=17% Similarity=0.130 Sum_probs=76.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCH-------HHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--C
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P 226 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~-------~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~ 226 (280)
.++.+|||+|||+|..+..++..+. +|+++|+|+ .+++.|+++...+++ ..+++++++|+.++. .
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~-----~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDT-----AARINLHFGNAAEQMPAL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH-----HTTEEEEESCHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCC-----ccCeEEEECCHHHHHHhh
Confidence 3457999999999999999988765 699999999 999999887654322 234899999987752 2
Q ss_pred CC--CcEEEEEccchhhcCC------------------hhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 227 ET--GRYDVIWVQWCIGHLT------------------DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 ~~--~~fDlV~~~~~l~~~~------------------~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
++ ++||+|++.-.+.+.. +.+...+++.+.++.+. .+++..+-
T Consensus 156 ~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p~ 218 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRPR 218 (258)
T ss_dssp HHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEET
T ss_pred hccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcCC
Confidence 22 5899999975544421 12345677777777643 56665443
No 265
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.85 E-value=1.5e-09 Score=93.64 Aligned_cols=105 Identities=12% Similarity=-0.003 Sum_probs=68.9
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+|||+|.++..++++ +...+.++|++..+... . ........++..+..+++...+.+++||+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~-----p---i~~~~~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEK-----P---MNVQSLGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCC-----C---CCCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccc-----c---cccCcCCCCeEEEeccceehhcCCCCccE
Confidence 456779999999999999977765 34478889987443100 0 00011123555666666555555679999
Q ss_pred EEccchhhcCCh---hhH--HHHHHHHHHcCCCC-cEEEEE
Q 023562 234 IWVQWCIGHLTD---DDF--VSFFKRAKVGLKPG-GFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~---~d~--~~~l~~~~r~LkpG-G~lii~ 268 (280)
|+|..+.+ -.. +.. ..+++.+.++|+|| |.|+++
T Consensus 144 VlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 144 LLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 99986554 111 111 23578889999999 999985
No 266
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.84 E-value=6e-09 Score=100.33 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=76.2
Q ss_pred CCccEEEeecCccHHHHHHH---HhcCC--cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcE
Q 023562 157 QHLVALDCGSGIGRITKNLL---IRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~---~~~~~--~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (280)
+...|||+|||+|.++...+ +++.. +|.+||-|+ |...+++....+++ ..+|+++.+|++++.++ +++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~-----~dkVtVI~gd~eev~LP-EKV 429 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW-----GSQVTVVSSDMREWVAP-EKA 429 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT-----GGGEEEEESCTTTCCCS-SCE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC-----CCeEEEEeCcceeccCC-ccc
Confidence 34579999999998854443 33333 689999997 66678777777665 67899999999999876 799
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
|+|++-+.=..+-.+-...++....+.|||||+++
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99998633111111234468888899999999874
No 267
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.80 E-value=2.7e-08 Score=87.23 Aligned_cols=113 Identities=18% Similarity=0.247 Sum_probs=82.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD 232 (280)
..++.+||-+|.|.|..++.+++.. ..+|+.||+++.+++.+++.+...+. ......+++++.+|...+- ...++||
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~-~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc-cccCCCcEEEEechHHHHHhhccccCC
Confidence 3467899999999999999998653 35899999999999999998743110 0011467999999988874 3457999
Q ss_pred EEEccchhhcCChhhH--HHHHHHHHHcCCCCcEEEEE
Q 023562 233 VIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~ 268 (280)
+|++-..=..-+...+ ..|++.++++|+|||+++.-
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 9996522100010111 47999999999999999874
No 268
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.78 E-value=8.3e-09 Score=88.81 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=58.4
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC--CcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET--GRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~--~~fD 232 (280)
..++.+|||+|||+|.++..+++++..+|+++|+|+.|++.++++ . ..+++++++|+..+++++ +.|
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---------~~~v~~i~~D~~~~~~~~~~~~~- 97 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---------DERLEVINEDASKFPFCSLGKEL- 97 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---------CTTEEEECSCTTTCCGGGSCSSE-
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---------CCCeEEEEcchhhCChhHccCCc-
Confidence 446779999999999999999877545899999999999999887 2 256899999999887542 234
Q ss_pred EEEccch
Q 023562 233 VIWVQWC 239 (280)
Q Consensus 233 lV~~~~~ 239 (280)
.|+++..
T Consensus 98 ~vv~NlP 104 (249)
T 3ftd_A 98 KVVGNLP 104 (249)
T ss_dssp EEEEECC
T ss_pred EEEEECc
Confidence 5555543
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.76 E-value=2.9e-08 Score=97.43 Aligned_cols=109 Identities=12% Similarity=0.032 Sum_probs=80.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-------------------------------------------CcEEEEeCCHH
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-------------------------------------------NEVDLLEPVSH 191 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-------------------------------------------~~v~~vD~S~~ 191 (280)
..++..|||.+||+|.+++..+.... ..|+|+|+++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 34567899999999999887765421 26999999999
Q ss_pred HHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC--CCcEEEEEccchhh--cCChhhHHHHHHHHHHcC---CCCcE
Q 023562 192 FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--TGRYDVIWVQWCIG--HLTDDDFVSFFKRAKVGL---KPGGF 264 (280)
Q Consensus 192 ~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~--~~~fDlV~~~~~l~--~~~~~d~~~~l~~~~r~L---kpGG~ 264 (280)
|++.|+.++...|+ ...++|.++|+.++..+ .++||+|+++--+. .-..+++..+++.+.+.| .|||.
T Consensus 268 av~~A~~N~~~agv-----~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 268 VIQRARTNARLAGI-----GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHHTTC-----GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHcCC-----CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 99999999988765 45689999999887433 23899999994332 222345556666555554 57998
Q ss_pred EEEE
Q 023562 265 FVLK 268 (280)
Q Consensus 265 lii~ 268 (280)
+++.
T Consensus 343 ~~il 346 (703)
T 3v97_A 343 LSLF 346 (703)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.75 E-value=6.4e-09 Score=91.95 Aligned_cols=76 Identities=20% Similarity=0.237 Sum_probs=62.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--C---CC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P---ET 228 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~---~~ 228 (280)
..++.+|||+|||+|..+..++++.. .+|+++|+|+.|++.|++++... +.+++++++|+.+++ . ..
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-------g~~v~~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-------SDRVSLFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-------TTTEEEEECCGGGHHHHHHHTTC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEECCHHHHHHHHHhcCC
Confidence 44677999999999999999998853 47999999999999999998763 247999999988764 1 11
Q ss_pred CcEEEEEcc
Q 023562 229 GRYDVIWVQ 237 (280)
Q Consensus 229 ~~fDlV~~~ 237 (280)
.+||.|++.
T Consensus 97 ~~~D~Vl~D 105 (301)
T 1m6y_A 97 EKVDGILMD 105 (301)
T ss_dssp SCEEEEEEE
T ss_pred CCCCEEEEc
Confidence 579999875
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.72 E-value=2.4e-08 Score=95.17 Aligned_cols=114 Identities=11% Similarity=-0.007 Sum_probs=80.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-------------------CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCccee
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATN 215 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-------------------~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~ 215 (280)
+.++.+|||.+||+|.+...+++.. ...++|+|+++.+++.|+.++...+.... .....+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~-~~~~~~ 245 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGN-LDHGGA 245 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCB-GGGTBS
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCcc-ccccCC
Confidence 4456799999999999988776541 12699999999999999988765433100 001267
Q ss_pred EEEccCCCCC-CCCCcEEEEEccchhhcCCh------------hhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 216 FFCVPLQDFT-PETGRYDVIWVQWCIGHLTD------------DDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 216 ~~~~d~~~~~-~~~~~fDlV~~~~~l~~~~~------------~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+.++|....+ ....+||+|+++-.+....+ .....|+..+.+.|+|||++.+.-
T Consensus 246 I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 246 IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp EEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 8888865532 22368999999855443221 112379999999999999988863
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.71 E-value=1.2e-08 Score=88.02 Aligned_cols=74 Identities=8% Similarity=0.063 Sum_probs=57.5
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCc--EEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC----
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---- 228 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~--v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---- 228 (280)
..++.+|||+|||+|.++. +. ++ .+ |+++|+++.|++.+++++.. ..+++++++|+.++++++
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL--------GPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT--------GGGEEEECSCGGGCCHHHHHHH
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc--------CCceEEEECchhhCCHHHhhcc
Confidence 4466799999999999999 64 54 45 99999999999999988754 247999999998876431
Q ss_pred -CcEEEEEccch
Q 023562 229 -GRYDVIWVQWC 239 (280)
Q Consensus 229 -~~fDlV~~~~~ 239 (280)
+..|.|+++..
T Consensus 88 ~~~~~~vvsNlP 99 (252)
T 1qyr_A 88 MGQPLRVFGNLP 99 (252)
T ss_dssp HTSCEEEEEECC
T ss_pred cCCceEEEECCC
Confidence 23467777644
No 273
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.69 E-value=9.1e-08 Score=79.51 Aligned_cols=103 Identities=16% Similarity=0.042 Sum_probs=73.7
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC------------
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF------------ 224 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~------------ 224 (280)
+..+|||+||| +.+..+++....+|+.+|.+++..+.|+++++..++. ...+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~---~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA---EGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC---TTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCCceEEEEeCchhhhcccccccchhh
Confidence 34689999985 6777666532248999999999999999999875430 024789999986542
Q ss_pred ---C--------C-CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 225 ---T--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 225 ---~--------~-~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+ . ..++||+|++-.-. ....+..+.+.|+|||+| +.+|+.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~I-v~DNv~ 156 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTL-LFDDYS 156 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEE-EETTGG
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEE-EEeCCc
Confidence 1 1 23689999987532 125566677999999998 667754
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.66 E-value=2.5e-08 Score=87.26 Aligned_cols=63 Identities=11% Similarity=0.183 Sum_probs=53.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCc---EEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNE---VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~---v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 227 (280)
..++.+|||+|||+|.++..+++++..+ |+++|+|+.|++.++++. . .+++++++|+.+++++
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~---------~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G---------ELLELHAGDALTFDFG 105 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G---------GGEEEEESCGGGCCGG
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C---------CCcEEEECChhcCChh
Confidence 4467799999999999999999876532 999999999999999884 2 4689999999887643
No 275
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.65 E-value=6.1e-09 Score=89.99 Aligned_cols=106 Identities=14% Similarity=0.019 Sum_probs=67.7
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||||||+|.++..++++ +...|.++|++..+...+.. ......++.++..++....+...++|+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~--------~~~~g~~ii~~~~~~dv~~l~~~~~Dv 159 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM--------RTTLGWNLIRFKDKTDVFNMEVIPGDT 159 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--------CCBTTGGGEEEECSCCGGGSCCCCCSE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc--------cccCCCceEEeeCCcchhhcCCCCcCE
Confidence 456779999999999999977754 34478999998654221110 011123444444433323344578999
Q ss_pred EEccchhhcCCh---hhH--HHHHHHHHHcCCCC--cEEEEEe
Q 023562 234 IWVQWCIGHLTD---DDF--VSFFKRAKVGLKPG--GFFVLKE 269 (280)
Q Consensus 234 V~~~~~l~~~~~---~d~--~~~l~~~~r~LkpG--G~lii~e 269 (280)
|+|..+.. -.. +.. ..+++-+.++|+|| |.|++.=
T Consensus 160 VLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 160 LLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 99986654 221 111 24577888999999 9999863
No 276
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.64 E-value=3.4e-07 Score=83.13 Aligned_cols=131 Identities=17% Similarity=0.188 Sum_probs=80.7
Q ss_pred HHHHHHHhccCCCcc-CCCCccEEEeecCccHHHHHHHH--------hc-------CC-cEEEEeCCHHHHHHHHHHcCc
Q 023562 140 AFLQMLLSDRFPNAR-NNQHLVALDCGSGIGRITKNLLI--------RY-------FN-EVDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 140 ~~l~~~l~~~l~~~~-~~~~~~VLDlGcG~G~~s~~l~~--------~~-------~~-~v~~vD~S~~~l~~A~~~~~~ 202 (280)
..+...+........ ...+.+|+|+|||+|..+..++. ++ +. +|...|+....-...=+.+..
T Consensus 34 ~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~ 113 (374)
T 3b5i_A 34 HLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPP 113 (374)
T ss_dssp HHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCC
T ss_pred HHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhh
Confidence 455555544322110 12357999999999999887632 21 22 788888777665544444332
Q ss_pred CCC-----C-CCCCCcceeEEEccCCCC---CCCCCcEEEEEccchhhcCCh----------------------------
Q 023562 203 ENH-----M-APDMHKATNFFCVPLQDF---TPETGRYDVIWVQWCIGHLTD---------------------------- 245 (280)
Q Consensus 203 ~~~-----~-~~~~~~~i~~~~~d~~~~---~~~~~~fDlV~~~~~l~~~~~---------------------------- 245 (280)
..- . ......+..|..+.-..+ .+++++||+|+++.+||++.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~ 193 (374)
T 3b5i_A 114 LVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTT 193 (374)
T ss_dssp BCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHH
T ss_pred hhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHH
Confidence 100 0 000001123444433332 356689999999999999872
Q ss_pred --------hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 246 --------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 246 --------~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.|+..+|+..++.|+|||.++++-.
T Consensus 194 ~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 194 TAYKRQFQADLAEFLRARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 1677789999999999999998743
No 277
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.63 E-value=1.5e-07 Score=85.53 Aligned_cols=106 Identities=14% Similarity=0.133 Sum_probs=74.5
Q ss_pred CccEEEeecCccHHHHHHHHh-----------------cCC-cEEEEeCC-----------HHHHHHHHHHcCcCCCCCC
Q 023562 158 HLVALDCGSGIGRITKNLLIR-----------------YFN-EVDLLEPV-----------SHFLDAARESLAPENHMAP 208 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~-----------------~~~-~v~~vD~S-----------~~~l~~A~~~~~~~~~~~~ 208 (280)
..+|+|+||++|..+..++.. .+. +|...|+. +.+.+.+++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 578999999999999877654 111 68888877 6666555443221
Q ss_pred CCCcceeEEEccCCCC---CCCCCcEEEEEccchhhcCChh-------------------------------------hH
Q 023562 209 DMHKATNFFCVPLQDF---TPETGRYDVIWVQWCIGHLTDD-------------------------------------DF 248 (280)
Q Consensus 209 ~~~~~i~~~~~d~~~~---~~~~~~fDlV~~~~~l~~~~~~-------------------------------------d~ 248 (280)
..+.-|..+....+ .++++++|+|+++.+||++.+. |+
T Consensus 127 --~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~ 204 (384)
T 2efj_A 127 --KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDF 204 (384)
T ss_dssp --CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHH
Confidence 11235566655554 3567899999999999997641 23
Q ss_pred HHHHHHHHHcCCCCcEEEEEecc
Q 023562 249 VSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 249 ~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
..||+..++.|+|||.+++.-..
T Consensus 205 ~~FL~~Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 205 TTFLRIHSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhccCCeEEEEEec
Confidence 34578889999999999987444
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.61 E-value=1.9e-08 Score=97.07 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=73.4
Q ss_pred CccEEEeecCccHHHHHHHHh----c----------CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC
Q 023562 158 HLVALDCGSGIGRITKNLLIR----Y----------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD 223 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~----~----------~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~ 223 (280)
...|||+|||+|.++...+.. + ..+|.+||.|+.++...+.+.. +++ ...++++.+|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~-----~d~VtVI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW-----KRRVTIIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT-----TTCSEEEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC-----CCeEEEEeCchhh
Confidence 457999999999997533221 1 1189999999987766665543 333 4669999999999
Q ss_pred CCCC-----CCcEEEEEccchhhcCCh-hhHHHHHHHHHHcCCCCcEEE
Q 023562 224 FTPE-----TGRYDVIWVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 224 ~~~~-----~~~fDlV~~~~~l~~~~~-~d~~~~l~~~~r~LkpGG~li 266 (280)
+..+ ++++|+|++-+. .++.+ +-....+..+.+.|||||+++
T Consensus 484 v~lp~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 8752 479999998754 33322 223567888889999999865
No 279
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.59 E-value=1.1e-08 Score=94.00 Aligned_cols=74 Identities=19% Similarity=0.184 Sum_probs=60.3
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcC--CCCCCCCCcceeEEEccCCCC-CC-CCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TP-ETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~--~~~~~~~~~~i~~~~~d~~~~-~~-~~~~fD 232 (280)
++.+|||+|||+|..+..+++.+ .+|+++|+|+.|++.|++++... ++ .+++++++|+.++ +. .+++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl------~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEG------KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTT------CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCC------CcEEEEECcHHHhhhhccCCCce
Confidence 36799999999999999887665 47999999999999999998753 22 4699999999875 21 125899
Q ss_pred EEEcc
Q 023562 233 VIWVQ 237 (280)
Q Consensus 233 lV~~~ 237 (280)
+|++.
T Consensus 166 vV~lD 170 (410)
T 3ll7_A 166 YIYVD 170 (410)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 280
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.50 E-value=1e-07 Score=82.88 Aligned_cols=105 Identities=12% Similarity=-0.049 Sum_probs=65.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+|||+||++|.++..++++ +...|+++|++..+.... ........++.....++..+.+..+++|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P--------~~~~~~~~~iv~~~~~~di~~l~~~~~Dl 150 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKP--------IHMQTLGWNIVKFKDKSNVFTMPTEPSDT 150 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC--------CCCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccc--------ccccccCCceEEeecCceeeecCCCCcCE
Confidence 446789999999999999988865 444789999875431100 00000122333333333323334578999
Q ss_pred EEccchhhcCCh---hhH--HHHHHHHHHcCCCC-cEEEEE
Q 023562 234 IWVQWCIGHLTD---DDF--VSFFKRAKVGLKPG-GFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~---~d~--~~~l~~~~r~LkpG-G~lii~ 268 (280)
|+|..+.. -.. +.. ..++.-+.++|+|| |.|++.
T Consensus 151 VlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 151 LLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp EEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 99875544 221 111 34578888999999 999987
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.49 E-value=4.7e-08 Score=84.47 Aligned_cols=83 Identities=18% Similarity=0.123 Sum_probs=58.6
Q ss_pred ccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCC--CCCCC-CCcceeEEEccCCCC-CCCCCcEEEE
Q 023562 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN--HMAPD-MHKATNFFCVPLQDF-TPETGRYDVI 234 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~--~~~~~-~~~~i~~~~~d~~~~-~~~~~~fDlV 234 (280)
.+|||+|||+|..+..++.++. +|+++|+++.+.+.+++++.... ..... ...+++++++|..++ +....+||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 7999999999999999998876 59999999988666665543210 00000 024689999998764 2212479999
Q ss_pred Eccchhhc
Q 023562 235 WVQWCIGH 242 (280)
Q Consensus 235 ~~~~~l~~ 242 (280)
++.-.+.+
T Consensus 169 ~lDP~y~~ 176 (258)
T 2oyr_A 169 YLDPMFPH 176 (258)
T ss_dssp EECCCCCC
T ss_pred EEcCCCCC
Confidence 99765544
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.47 E-value=2.3e-07 Score=88.38 Aligned_cols=105 Identities=11% Similarity=-0.128 Sum_probs=73.5
Q ss_pred ccEEEeecCccHHHHHHHHhc----------------CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCC
Q 023562 159 LVALDCGSGIGRITKNLLIRY----------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~----------------~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~ 222 (280)
.+|||.+||+|.+...+++.. ...++|+|+++.++..|+.++...++ ..++.+.++|..
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi-----~~~i~i~~gDtL 320 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI-----DFNFGKKNADSF 320 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC-----CCBCCSSSCCTT
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC-----Ccccceeccchh
Confidence 499999999999987765321 22699999999999999988765443 223444667654
Q ss_pred CCC-CCCCcEEEEEccchhhc-------------------------CChh--hHHHHHHHHHHcCCCCcEEEEE
Q 023562 223 DFT-PETGRYDVIWVQWCIGH-------------------------LTDD--DFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 223 ~~~-~~~~~fDlV~~~~~l~~-------------------------~~~~--d~~~~l~~~~r~LkpGG~lii~ 268 (280)
..+ ....+||+|+++-.+.. +++. .--.|++.+.+.|+|||++.+.
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALL 394 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEE
Confidence 433 33468999999833321 1110 1126999999999999998776
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.46 E-value=3.1e-07 Score=83.03 Aligned_cols=112 Identities=12% Similarity=0.049 Sum_probs=79.9
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCC--CCCCCCcceeEEEccCCCCC----CCCCc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH--MAPDMHKATNFFCVPLQDFT----PETGR 230 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~--~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (280)
++.+||=+|.|.|..++.+++....+|+.||+++.+++.+++.+....- .......+++++..|...+- ...++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 4679999999999999999977666999999999999999998764211 11111245788888875542 12368
Q ss_pred EEEEEccchh-------hcCChhh-HHHHHHHHHHcCCCCcEEEEE
Q 023562 231 YDVIWVQWCI-------GHLTDDD-FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 231 fDlV~~~~~l-------~~~~~~d-~~~~l~~~~r~LkpGG~lii~ 268 (280)
||+|+.-..- ....... ...+++.++++|+|||+++..
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 9999965211 1111111 267999999999999999874
No 284
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.43 E-value=1.1e-06 Score=83.54 Aligned_cols=108 Identities=16% Similarity=0.067 Sum_probs=78.7
Q ss_pred CCCccEEEeecCccHHHHHHHHhc----CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC--C-CCC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY----FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PET 228 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~----~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~-~~~ 228 (280)
.++.+|+|.+||+|.+...+++.. ...++|+|+++.++..|+.++...+.. ..++.+.++|.... + ...
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----~~~~~I~~gDtL~~d~p~~~~ 295 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP----IENQFLHNADTLDEDWPTQEP 295 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCTTTSCSCCSSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC----cCccceEecceeccccccccc
Confidence 356799999999999988887662 237999999999999999887554331 13577889887654 3 234
Q ss_pred CcEEEEEccchhhc-------------------CCh---hhHHHHHHHHHHcCC-CCcEEEEE
Q 023562 229 GRYDVIWVQWCIGH-------------------LTD---DDFVSFFKRAKVGLK-PGGFFVLK 268 (280)
Q Consensus 229 ~~fDlV~~~~~l~~-------------------~~~---~d~~~~l~~~~r~Lk-pGG~lii~ 268 (280)
.+||+|+++--+.. +++ .+ -.|+..+.+.|+ |||++.+.
T Consensus 296 ~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~V 357 (542)
T 3lkd_A 296 TNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIV 357 (542)
T ss_dssp CCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEE
T ss_pred ccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEE
Confidence 78999998722210 110 11 258999999999 99998776
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.42 E-value=1e-06 Score=86.41 Aligned_cols=110 Identities=11% Similarity=0.039 Sum_probs=74.2
Q ss_pred CCccEEEeecCccHHHHHHHHhcC----CcEEEEeCCHHHHHHH--HHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF----NEVDLLEPVSHFLDAA--RESLAPENHMAPDMHKATNFFCVPLQDFT-PETG 229 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~----~~v~~vD~S~~~l~~A--~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~ 229 (280)
++.+|||.|||+|.+...++.... .+++|+|+++.+++.| +.++..+++.. +. ....+...|+.+.. ....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Llh-Gi-~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVS-SN-NAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCB-TT-BCCEEECCCGGGCCGGGGT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhc-CC-CcceEEecchhcccccccC
Confidence 467999999999999998887653 2799999999999999 55554322210 00 12344555555432 2236
Q ss_pred cEEEEEccchhhc--CCh-------------------------hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGH--LTD-------------------------DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~--~~~-------------------------~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+||+|+++--+.. -.+ +-...|+..+.+.|+|||++.+.
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfI 464 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAI 464 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEE
Confidence 8999999843311 111 01345889999999999998886
No 286
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.41 E-value=8.8e-07 Score=79.95 Aligned_cols=114 Identities=15% Similarity=0.089 Sum_probs=82.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-CCCCcEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD 232 (280)
+.++.+|||++||+|.-+..+++.+.. .|+++|+|+.-++..++++...+........++.+...|...+. ...++||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 667889999999999999999887554 79999999999999988876544322222356788888877653 2346899
Q ss_pred EEEc----cc---hhhc--------CChhh-------HHHHHHHHHHcCCCCcEEEEE
Q 023562 233 VIWV----QW---CIGH--------LTDDD-------FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 233 lV~~----~~---~l~~--------~~~~d-------~~~~l~~~~r~LkpGG~lii~ 268 (280)
.|++ +. .+.. ....+ ...+|..+.+.|||||.++.+
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYs 283 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYS 283 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 9983 32 1111 11111 246889999999999998765
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.39 E-value=2.7e-07 Score=72.04 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=60.7
Q ss_pred CCccEEEeecCcc-HHHHHHHH-hcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCC-CcEEE
Q 023562 157 QHLVALDCGSGIG-RITKNLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G-~~s~~l~~-~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fDl 233 (280)
.+.+|||+|||.| ..+..|++ .++ .|+++|+|+..++ +++.|+.+...+. ..||+
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~---------------------~v~dDiF~P~~~~Y~~~DL 92 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG---------------------IVRDDITSPRMEIYRGAAL 92 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT---------------------EECCCSSSCCHHHHTTEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc---------------------eEEccCCCCcccccCCcCE
Confidence 4579999999999 69999987 566 4999999876553 6778887643221 38999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|++... +.+++..+.++++.. |.-++|.
T Consensus 93 IYsirP-----P~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 93 IYSIRP-----PAEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp EEEESC-----CTTTHHHHHHHHHHH--TCEEEEE
T ss_pred EEEcCC-----CHHHHHHHHHHHHHc--CCCEEEE
Confidence 988655 457878888877754 4445444
No 288
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.38 E-value=3.8e-07 Score=82.24 Aligned_cols=108 Identities=19% Similarity=0.172 Sum_probs=78.1
Q ss_pred CCccEEEeecCccHHHHHHHHh------------c---CC--cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc
Q 023562 157 QHLVALDCGSGIGRITKNLLIR------------Y---FN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~------------~---~~--~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~ 219 (280)
...+|+|+||++|..+..+... + .. +|...|........+-+.+.... ...+.-|..+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-----~~~~~~f~~g 125 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-----DVDGVCFING 125 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-----SCTTCEEEEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-----ccCCCEEEEe
Confidence 4578999999999776654332 1 12 79999999988888877765421 0112345555
Q ss_pred cCCCC---CCCCCcEEEEEccchhhcCCh-------------------------------hhHHHHHHHHHHcCCCCcEE
Q 023562 220 PLQDF---TPETGRYDVIWVQWCIGHLTD-------------------------------DDFVSFFKRAKVGLKPGGFF 265 (280)
Q Consensus 220 d~~~~---~~~~~~fDlV~~~~~l~~~~~-------------------------------~d~~~~l~~~~r~LkpGG~l 265 (280)
....+ .++++++|+|+++.++|++.+ .|+..||+..++.|+|||.+
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 44443 466789999999999999764 15667899999999999999
Q ss_pred EEEe
Q 023562 266 VLKE 269 (280)
Q Consensus 266 ii~e 269 (280)
++.-
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9873
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.29 E-value=8.8e-07 Score=77.33 Aligned_cols=107 Identities=9% Similarity=0.040 Sum_probs=77.3
Q ss_pred CCCccEEEeecCccHHHHHHHHhc------CCcEEEEeCCHH--------------------------HHHHHHHHcCcC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSH--------------------------FLDAARESLAPE 203 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~------~~~v~~vD~S~~--------------------------~l~~A~~~~~~~ 203 (280)
..+++|||+|+..|..+..++... ..+|+++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 356799999999999988775431 237999996421 467788888775
Q ss_pred CCCCCCCCcceeEEEccCCCC-C-CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 204 NHMAPDMHKATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 204 ~~~~~~~~~~i~~~~~d~~~~-~-~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
++. ..+++++.+++.+. + .++++||+|++-.-. | ......++.+...|+|||+|++.+.
T Consensus 185 gl~----~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y---~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLL----DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-Y---ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCC----STTEEEEESCHHHHSTTCCCCCEEEEEECCCS-H---HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCC----cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-c---ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 441 26799999987653 2 234689999986532 1 1345789999999999998887664
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.26 E-value=1.2e-06 Score=74.58 Aligned_cols=105 Identities=11% Similarity=-0.053 Sum_probs=61.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcc-eeEEEc-cCCCCCCCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCV-PLQDFTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~-i~~~~~-d~~~~~~~~~~f 231 (280)
.+++.+|||+||++|.++...++. +...|.|.++.... ....+.....+.+ +.|.++ |+.++. +.++
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~--------~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG--------HEEPMLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT--------SCCCCCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc--------ccCCCcccCCCceEEEeeccCCccCCC--CCCC
Confidence 667899999999999999977764 12234555543220 0000000000111 234446 887644 3589
Q ss_pred EEEEccchhhcCCh--hh---HHHHHHHHHHcCCCCc-EEEEEec
Q 023562 232 DVIWVQWCIGHLTD--DD---FVSFFKRAKVGLKPGG-FFVLKEN 270 (280)
Q Consensus 232 DlV~~~~~l~~~~~--~d---~~~~l~~~~r~LkpGG-~lii~e~ 270 (280)
|+|+|-..-. -.. -| ...++.-+.++|+||| .|++.=.
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 9999864322 111 11 1126777789999999 8888633
No 291
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.25 E-value=8.3e-07 Score=76.57 Aligned_cols=109 Identities=14% Similarity=0.102 Sum_probs=70.7
Q ss_pred CCccEEEeecCccHHHHHHHHh-------cC------CcEEEEeCCH---HHHH-----------HHHHHcCcCCCC---
Q 023562 157 QHLVALDCGSGIGRITKNLLIR-------YF------NEVDLLEPVS---HFLD-----------AARESLAPENHM--- 206 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~-------~~------~~v~~vD~S~---~~l~-----------~A~~~~~~~~~~--- 206 (280)
++.+|||+|+|+|..+..+++. .+ -+++++|..+ +++. .|++.+......
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988876553 33 2699999776 5555 445543321000
Q ss_pred -----CCCCCcceeEEEccCCCC-CCCC----CcEEEEEcc-chhhcCChhh--HHHHHHHHHHcCCCCcEEEE
Q 023562 207 -----APDMHKATNFFCVPLQDF-TPET----GRYDVIWVQ-WCIGHLTDDD--FVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 207 -----~~~~~~~i~~~~~d~~~~-~~~~----~~fDlV~~~-~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii 267 (280)
......+++++.+|+.+. +..+ .+||+|+.- +.-...+ + ...+++.+.++|+|||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p--~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNP--DMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCG--GGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccCh--hhcCHHHHHHHHHHcCCCcEEEE
Confidence 001125678899997663 3211 279999985 3332222 3 25899999999999999875
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.20 E-value=3.9e-06 Score=72.76 Aligned_cols=103 Identities=12% Similarity=0.033 Sum_probs=66.2
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCC-cceeEEEc-cCCCCCCCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCV-PLQDFTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~-~~i~~~~~-d~~~~~~~~~~f 231 (280)
..++.+|||+||++|.++.+++.. +...|.++|+...--+ ........+ ..+.|... |+..+++ .++
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he--------~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~ 161 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE--------EPQLVQSYGWNIVTMKSGVDVFYRPS--ECC 161 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC--------CCCCCCBTTGGGEEEECSCCTTSSCC--CCC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc--------CcchhhhcCCcceEEEeccCHhhCCC--CCC
Confidence 457779999999999999966654 4458999998543110 000000111 23677776 7766654 579
Q ss_pred EEEEccchhhcCChh--hH---HHHHHHHHHcCCCC-cEEEEE
Q 023562 232 DVIWVQWCIGHLTDD--DF---VSFFKRAKVGLKPG-GFFVLK 268 (280)
Q Consensus 232 DlV~~~~~l~~~~~~--d~---~~~l~~~~r~LkpG-G~lii~ 268 (280)
|+|+|--. .--+.+ |- ..+|+-+.++|++| |-|+|.
T Consensus 162 D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~K 203 (321)
T 3lkz_A 162 DTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVK 203 (321)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEE
Confidence 99998644 222221 11 23777788999999 888885
No 293
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.11 E-value=1.3e-05 Score=72.21 Aligned_cols=96 Identities=11% Similarity=0.009 Sum_probs=67.0
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..++.+|||+||++|.++..+++++. .|++||+.+ |-.... . ..+++++..|...+.++..+||+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~~l~----~--------~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQSLM----D--------TGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCHHHH----T--------TTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cChhhc----c--------CCCeEEEeCccccccCCCCCcCEE
Confidence 45788999999999999999998876 599999764 211111 1 356899999998888776789999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
+|-.+.. +.....++......+..++.|+.
T Consensus 275 vsDm~~~---p~~~~~l~~~wl~~~~~~~aI~~ 304 (375)
T 4auk_A 275 VCDMVEK---PAKVAALMAQWLVNGWCRETIFN 304 (375)
T ss_dssp EECCSSC---HHHHHHHHHHHHHTTSCSEEEEE
T ss_pred EEcCCCC---hHHhHHHHHHHHhccccceEEEE
Confidence 9976642 22333444444444444455443
No 294
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.03 E-value=9.5e-06 Score=70.37 Aligned_cols=72 Identities=17% Similarity=0.064 Sum_probs=59.3
Q ss_pred CCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----CCCC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 229 (280)
..++..++|++||.|..+..++++. .+|+|+|.++.+++.|++ +.. .++.++++++.++. ...+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai~~A~~-L~~---------~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAVARAKG-LHL---------PGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHH-TCC---------TTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-hcc---------CCEEEEECCcchHHHHHHHcCCC
Confidence 4567899999999999999999883 379999999999999998 643 36899999988763 1225
Q ss_pred cEEEEEcc
Q 023562 230 RYDVIWVQ 237 (280)
Q Consensus 230 ~fDlV~~~ 237 (280)
++|.|++.
T Consensus 89 ~vDgIL~D 96 (285)
T 1wg8_A 89 RVDGILAD 96 (285)
T ss_dssp CEEEEEEE
T ss_pred CcCEEEeC
Confidence 79999864
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.00 E-value=4.6e-05 Score=64.07 Aligned_cols=103 Identities=14% Similarity=0.032 Sum_probs=66.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCC-cceeEEEc-cCCCCCCCCCcE
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCV-PLQDFTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~-~~i~~~~~-d~~~~~~~~~~f 231 (280)
..++.+|||+||++|.++...+.. +...|.++|+-..--+ ........+ ..++|.++ |+..+++ .++
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe--------~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~ 145 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE--------EPVPMSTYGWNIVKLMSGKDVFYLPP--EKC 145 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC--------CCCCCCCTTTTSEEEECSCCGGGCCC--CCC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc--------CcchhhhcCcCceEEEeccceeecCC--ccc
Confidence 567789999999999999977655 4448999997543221 000001111 45788888 8755553 679
Q ss_pred EEEEccchhhcCCh-hhH---HHHHHHHHHcCCCCcEEEEE
Q 023562 232 DVIWVQWCIGHLTD-DDF---VSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 232 DlV~~~~~l~~~~~-~d~---~~~l~~~~r~LkpGG~lii~ 268 (280)
|.|+|-..=..-.+ .|- ..+|+-+.++|++ |-|+|.
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 99998744322111 121 3377888899999 788774
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.60 E-value=0.00027 Score=66.96 Aligned_cols=108 Identities=17% Similarity=0.050 Sum_probs=71.6
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc--------------CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~--------------~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d 220 (280)
+.++.+|+|-+||+|.+.....++. -..+.|+|+++.+...|+-+.--.+. ...++..+|
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~------~~~~I~~~d 288 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL------EYPRIDPEN 288 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC------SCCEEECSC
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC------ccccccccc
Confidence 4566799999999999987665421 12599999999999999877544332 223556666
Q ss_pred CCCCCC----CCCcEEEEEccchhhc---------CC----h-hhHHHHHHHHHHcCC-------CCcEEEEE
Q 023562 221 LQDFTP----ETGRYDVIWVQWCIGH---------LT----D-DDFVSFFKRAKVGLK-------PGGFFVLK 268 (280)
Q Consensus 221 ~~~~~~----~~~~fDlV~~~~~l~~---------~~----~-~d~~~~l~~~~r~Lk-------pGG~lii~ 268 (280)
....+. ...+||+|+++--+.. ++ . +.--.|+..+.+.|| |||++.+.
T Consensus 289 tL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 289 SLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp TTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred cccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 544331 2247999999844321 11 0 112357788888876 79988776
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.56 E-value=1.2e-05 Score=88.45 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=55.3
Q ss_pred CCccEEEeecCccHHHHHHHHhc------CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETG 229 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~------~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~ 229 (280)
+..+||++|.|+|..+..+++.. +.+++..|+|+...+.|+++++. ..+.....|..+. ++...
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---------~di~~~~~d~~~~~~~~~~ 1310 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---------LHVTQGQWDPANPAPGSLG 1310 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---------HTEEEECCCSSCCCC----
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---------cccccccccccccccCCCC
Confidence 46799999999998777665542 22689999999988888777643 1122221233221 11346
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+||+|++..++|-.+ ++...++++.++|||||++++.|..
T Consensus 1311 ~ydlvia~~vl~~t~--~~~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1311 KADLLVCNCALATLG--DPAVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp -CCEEEEECC----------------------CCEEEEEEC-
T ss_pred ceeEEEEcccccccc--cHHHHHHHHHHhcCCCcEEEEEecc
Confidence 799999999997555 6778999999999999999998743
No 298
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.53 E-value=0.0004 Score=61.97 Aligned_cols=115 Identities=9% Similarity=0.090 Sum_probs=83.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCC-------CC--------CCCcceeEEEcc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHM-------AP--------DMHKATNFFCVP 220 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~-------~~--------~~~~~i~~~~~d 220 (280)
+...|+.+|||.......+...+.. .+.=||. |.+++.-++.+...+.. .. -...+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3468999999999999988876443 4555555 88887777665542100 00 012467888889
Q ss_pred CCCCC--------C-CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 221 LQDFT--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 221 ~~~~~--------~-~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
+.+.. . ......++++-.++.|++++....+++.+.+.. |+|.+++.|.+..
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 88731 1 234678999999999999999999999999987 7888887787765
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.48 E-value=0.00016 Score=63.42 Aligned_cols=58 Identities=19% Similarity=0.020 Sum_probs=45.8
Q ss_pred HHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCc
Q 023562 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~ 202 (280)
..++..++... ..++..|||++||+|..+..++..+. +++|+|+++.+++.|++++..
T Consensus 222 ~~l~~~~i~~~-----~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 222 LELAERLVRMF-----SFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHH-----CCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHH
Confidence 34555555432 23567999999999999998877665 699999999999999998764
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.38 E-value=0.00052 Score=62.24 Aligned_cols=101 Identities=19% Similarity=0.166 Sum_probs=70.1
Q ss_pred ccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------CCCc
Q 023562 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--------ETGR 230 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~ 230 (280)
.+++|+-||.|.++..+.+.++..+.++|+++.+++..+.++.. ..++++|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPR-----------SLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTT-----------SEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCC-----------CceEecChhhcCHHHHHhhcccCCC
Confidence 47999999999999999999998889999999999999988743 4567788877642 2357
Q ss_pred EEEEEccch---hhc-----CChh--hHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 231 YDVIWVQWC---IGH-----LTDD--DFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 231 fDlV~~~~~---l~~-----~~~~--d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
+|+|+...- +.. ..++ .+-.-+-++.+.++| .+++.|||.
T Consensus 72 ~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~ 121 (376)
T 3g7u_A 72 IDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVP 121 (376)
T ss_dssp CCEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECT
T ss_pred eeEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecch
Confidence 999985421 111 1111 111122234445688 467789984
No 301
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.19 E-value=0.00031 Score=60.86 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=75.9
Q ss_pred CccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-C---CCCCCcEEE
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-F---TPETGRYDV 233 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~---~~~~~~fDl 233 (280)
+..+||+=+|+|.++..+++. .++++.+|.++..++..++++.. ..+++++..|... + .++..+||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~--------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF--------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT--------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc--------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 357999999999999999874 47899999999999999999865 3568889888533 2 233357999
Q ss_pred EEccchhhcCChhhHHHHHHHHHH--cCCCCcEEEE
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVL 267 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r--~LkpGG~lii 267 (280)
|++--.+.. ..++..+++.+.+ .+.|+|++++
T Consensus 163 VfiDPPYe~--k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 163 IFIDPSYER--KEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp EEECCCCCS--TTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEECCCCCC--CcHHHHHHHHHHHhCccCCCeEEEE
Confidence 998766543 2366677777665 4678998877
No 302
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.03 E-value=0.00048 Score=61.67 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=55.3
Q ss_pred CccEEEeecCccHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC---CCcEE
Q 023562 158 HLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYD 232 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~--~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD 232 (280)
+.+|+|+-||.|.++..+.+.+ +..|.++|+++.+++..+.++.. ..++++|+.++... ...+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----------~~~~~~Di~~~~~~~~~~~~~D 70 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----------TQLLAKTIEGITLEEFDRLSFD 70 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECSCGGGCCHHHHHHHCCS
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----------cccccCCHHHccHhHcCcCCcC
Confidence 3589999999999999999888 45899999999999999999754 34677888776421 11589
Q ss_pred EEEcc
Q 023562 233 VIWVQ 237 (280)
Q Consensus 233 lV~~~ 237 (280)
+|+..
T Consensus 71 ~l~~g 75 (343)
T 1g55_A 71 MILMS 75 (343)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99865
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.96 E-value=0.00074 Score=58.58 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=60.4
Q ss_pred CCCCccEEEeec------CccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC
Q 023562 155 NNQHLVALDCGS------GIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP 226 (280)
Q Consensus 155 ~~~~~~VLDlGc------G~G~~s~~l~~~~~~--~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 226 (280)
...+.+|||+|+ -+|.+. +.+.+.. .|+++|+.+-.. .. ..++++|......
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s-----------------da-~~~IqGD~~~~~~ 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS-----------------DA-DSTLIGDCATVHT 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC-----------------SS-SEEEESCGGGEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc-----------------CC-CeEEEcccccccc
Confidence 556789999995 777742 2222443 699999854221 11 2458888765544
Q ss_pred CCCcEEEEEccch---hhcCChh-----h-HHHHHHHHHHcCCCCcEEEEE
Q 023562 227 ETGRYDVIWVQWC---IGHLTDD-----D-FVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 227 ~~~~fDlV~~~~~---l~~~~~~-----d-~~~~l~~~~r~LkpGG~lii~ 268 (280)
. ++||+|+|-.. -.+..-+ . .+.++.-+.+.|+|||.|++.
T Consensus 167 ~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 167 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp S-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 3 78999997532 2222111 2 356777788899999999997
No 304
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.79 E-value=0.009 Score=52.57 Aligned_cols=105 Identities=10% Similarity=-0.036 Sum_probs=75.9
Q ss_pred ccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC---------CCCC
Q 023562 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---------PETG 229 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---------~~~~ 229 (280)
..|+++|||-=.....+.......+.-|| -|..++..++.+...+. ....+..++.+|+.+ . +...
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~---~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGV---TPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTC---CCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCC---CCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 46999999987665544311112688888 59999999888864221 113567888889876 2 1123
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.-=++++-.+++|+++++...+++.+...+.||+.+++.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d 217 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVE 217 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 445777789999999999999999999999999887765
No 305
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.76 E-value=0.0031 Score=55.97 Aligned_cols=100 Identities=16% Similarity=0.077 Sum_probs=67.9
Q ss_pred CccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC-CCcEEEEEc
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWV 236 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fDlV~~ 236 (280)
+.+++|+.||.|.++..+.+.++..+.++|+++.+++..+.++... . ++|+.++... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~--------~-----~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK--------P-----EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC--------C-----BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC--------C-----cCCHHHcCHhhCCCCCEEEE
Confidence 4689999999999999999999988999999999999999998652 1 4666665421 135899985
Q ss_pred cc-----hhhc----CChh--hHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 237 QW-----CIGH----LTDD--DFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 237 ~~-----~l~~----~~~~--d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
.. +... +.++ .+-.-+-++.+.++|. +++.|||.
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~ 122 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVK 122 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEG
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcH
Confidence 41 1110 1111 1222223344456884 77889984
No 306
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.74 E-value=0.0024 Score=56.67 Aligned_cols=73 Identities=12% Similarity=0.188 Sum_probs=56.8
Q ss_pred CCCCccEEEeecCccHHHHHHHHhc-CC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----CC
Q 023562 155 NNQHLVALDCGSGIGRITKNLLIRY-FN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~~~~-~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (280)
..++..++|+.||.|..+..+++.. .. +|+++|.++.+++.|+ ++. ..+++++.+++.++. ..
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---------~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---------DPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---------CTTEEEEESCGGGHHHHHHHTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---------CCcEEEEeCCHHHHHHHHHhcC
Confidence 5677899999999999999999874 32 8999999999999984 442 357899999887763 11
Q ss_pred -CCcEEEEEcc
Q 023562 228 -TGRYDVIWVQ 237 (280)
Q Consensus 228 -~~~fDlV~~~ 237 (280)
.+++|.|+..
T Consensus 125 ~~~~vDgILfD 135 (347)
T 3tka_A 125 LIGKIDGILLD 135 (347)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCcccEEEEC
Confidence 1369999844
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.73 E-value=0.0024 Score=54.68 Aligned_cols=59 Identities=14% Similarity=0.100 Sum_probs=45.9
Q ss_pred HHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcC
Q 023562 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (280)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~ 203 (280)
..++..++... ..++..|||..||+|..+....+.+. +++|+|+++.+++.+++++...
T Consensus 199 ~~l~~~~i~~~-----~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 199 RDLIERIIRAS-----SNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp HHHHHHHHHHH-----CCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhc
Confidence 35555555432 34667999999999999997776654 6999999999999999998653
No 308
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.63 E-value=0.0033 Score=56.39 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=48.8
Q ss_pred CccEEEeecCccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC
Q 023562 158 HLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 224 (280)
+..|||||.|.|.+|..|++.. ..+|+++|+++.++...++.. . ..+++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--------CCCEEEEECCccch
Confidence 4789999999999999999863 457999999999999998876 2 24688899988654
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.42 E-value=0.0054 Score=54.42 Aligned_cols=103 Identities=11% Similarity=0.009 Sum_probs=69.4
Q ss_pred CCccEEEeecCccHHHHHHHHhcC--CcE-EEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC---CCc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF--NEV-DLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGR 230 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~--~~v-~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~ 230 (280)
...+++|+-||.|.++..+.+.++ ..+ .++|+++.+++..+.++... ++..|+.++... ...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------------~~~~DI~~~~~~~i~~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------------VQVKNLDSISIKQIESLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------------CBCCCTTTCCHHHHHHTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------------cccCChhhcCHHHhccCC
Confidence 456899999999999999988885 556 79999999999999998641 456788777521 126
Q ss_pred EEEEEccch---h----hc----CChhhHHHHHHHHHH-cCCC---CcEEEEEeccC
Q 023562 231 YDVIWVQWC---I----GH----LTDDDFVSFFKRAKV-GLKP---GGFFVLKENIA 272 (280)
Q Consensus 231 fDlV~~~~~---l----~~----~~~~d~~~~l~~~~r-~Lkp---GG~lii~e~~~ 272 (280)
+|+++...- + .. +.+ ....++.++.+ +++. .-.+++.|||.
T Consensus 77 ~Dil~ggpPCQ~fs~S~ag~~~~~~d-~r~~L~~~~~r~~i~~~~~~P~~~~lENV~ 132 (327)
T 3qv2_A 77 CNTWFMSPPCQPYNNSIMSKHKDIND-PRAKSVLHLYRDILPYLINKPKHIFIENVP 132 (327)
T ss_dssp CCEEEECCCCTTCSHHHHTTTCTTTC-GGGHHHHHHHHTTGGGCSSCCSEEEEEECG
T ss_pred CCEEEecCCccCcccccCCCCCCCcc-ccchhHHHHHHHHHHHhccCCCEEEEEchh
Confidence 899985421 2 11 121 22234555555 4432 23577889984
No 310
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.33 E-value=0.015 Score=50.79 Aligned_cols=106 Identities=17% Similarity=0.095 Sum_probs=71.8
Q ss_pred CCCccEEEeecCccHHHHHHHHhcCCc--EEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC----CC
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TG 229 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~~~--v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~ 229 (280)
..+.+++|+-||.|.++..+.+.++.. |.++|+++.+++.-+.+... ..++..|+.++... .+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~-----------~~~~~~DI~~i~~~~i~~~~ 82 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQG-----------KIMYVGDVRSVTQKHIQEWG 82 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTT-----------CEEEECCGGGCCHHHHHHTC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCC-----------CceeCCChHHccHHHhcccC
Confidence 456799999999999999998888874 69999999999988887643 34677888877521 13
Q ss_pred cEEEEEcc-----chhhc-----CChh--hHHHHHHHHHHcCCCC-cE----EEEEeccC
Q 023562 230 RYDVIWVQ-----WCIGH-----LTDD--DFVSFFKRAKVGLKPG-GF----FVLKENIA 272 (280)
Q Consensus 230 ~fDlV~~~-----~~l~~-----~~~~--d~~~~l~~~~r~LkpG-G~----lii~e~~~ 272 (280)
.+|+++.. ++... +.++ .+-.-+-++.+.++|. |. +++.|||.
T Consensus 83 ~~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~ 142 (295)
T 2qrv_A 83 PFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVV 142 (295)
T ss_dssp CCSEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEES
T ss_pred CcCEEEecCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCc
Confidence 68999843 22211 2211 2222233344556776 32 77889985
No 311
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.09 E-value=0.088 Score=44.92 Aligned_cols=106 Identities=10% Similarity=0.098 Sum_probs=68.2
Q ss_pred CCccEEEeecCccHHHHHHHHh-------cC-CcEEEEe-----CCH----------------------HHHHHH---HH
Q 023562 157 QHLVALDCGSGIGRITKNLLIR-------YF-NEVDLLE-----PVS----------------------HFLDAA---RE 198 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~-------~~-~~v~~vD-----~S~----------------------~~l~~A---~~ 198 (280)
-++.|+|+||-.|..+..+++. +. .+|.++| +.+ ..++.. .+
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4579999999999988876542 12 3899998 321 111111 11
Q ss_pred HcCcCCCCCCCCCcceeEEEccCCCCC------CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 199 SLAPENHMAPDMHKATNFFCVPLQDFT------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 199 ~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
+....+. ...+++++.+++.+.- .+..+||+|+.-.-. | ......++.+...|+|||+|++.+.
T Consensus 149 ~~~~~g~----~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y---~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 149 CSDFFGH----VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-Y---EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TTSTTTT----SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-H---HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhcCC----CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-c---chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 2222111 1367999999886531 223579999986542 1 2345688899999999999998774
No 312
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.02 E-value=0.017 Score=50.89 Aligned_cols=100 Identities=17% Similarity=0.181 Sum_probs=69.6
Q ss_pred ccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC-CCcEEEEEcc
Q 023562 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWVQ 237 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fDlV~~~ 237 (280)
++|+|+=||.|.++..+-+.|+..+.++|+++.+++.-+.++.. .++.+|+.++... -..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~------------~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA------------KLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCS------------EEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCC------------CcccCChhhCCHhhCCcccEEEec
Confidence 37999999999999999888998889999999999998888643 4577888877522 2468999843
Q ss_pred -----chhh----cCChh--hHHHHHHHHHHcCCCCcEEEEEeccC
Q 023562 238 -----WCIG----HLTDD--DFVSFFKRAKVGLKPGGFFVLKENIA 272 (280)
Q Consensus 238 -----~~l~----~~~~~--d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (280)
++.. -+.++ .+-.-+-++.+.++|. +++.|||.
T Consensus 69 pPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~ 112 (331)
T 3ubt_Y 69 PPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVK 112 (331)
T ss_dssp CCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECC
T ss_pred CCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeec
Confidence 1111 12221 2222233445557885 67789984
No 313
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.57 E-value=0.05 Score=43.87 Aligned_cols=92 Identities=12% Similarity=0.010 Sum_probs=59.5
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-------
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (280)
..++.+||..|+ |.|..+..++.....+|+++|.+++.++.+++.-. .. . .|..+..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~-----------~~-~--~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV-----------EY-V--GDSRSVDFADEILE 101 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC-----------SE-E--EETTCSTHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC-----------CE-E--eeCCcHHHHHHHHH
Confidence 456789999994 56766666665433469999999998887754211 01 1 1222110
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.....+|+|+.+-. . ..++.+.+.|+|||.+++.-
T Consensus 102 ~~~~~~~D~vi~~~g----~-----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA----G-----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HTTTCCEEEEEECCC----T-----HHHHHHHHTEEEEEEEEECS
T ss_pred HhCCCCCeEEEECCc----h-----HHHHHHHHHhccCCEEEEEc
Confidence 11236999986532 1 46788889999999998864
No 314
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.46 E-value=0.019 Score=53.63 Aligned_cols=60 Identities=20% Similarity=0.093 Sum_probs=48.0
Q ss_pred CCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 224 (280)
...+++|+-||.|.++..+.+.++..|.++|+++.+++.-+.++... ....+++.|+.++
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~--------p~~~~~~~DI~~i 146 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD--------PATHHFNEDIRDI 146 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC--------TTTCEEESCTHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC--------CCcceeccchhhh
Confidence 35789999999999999998888878999999999999988887431 2344566777654
No 315
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.096 Score=46.73 Aligned_cols=96 Identities=14% Similarity=-0.004 Sum_probs=64.5
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-----CCC
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TPE 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~~~ 227 (280)
..++.+||-+|||. |..+..+++.. ...|+++|.++..++.+++.-.. .++...-.++ ...
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT------------HVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC------------EEecCCccCHHHHHHHhc
Confidence 55778999999986 77888787654 43699999999999999765322 1111111111 011
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.+.+|+|+-.-.- ...++.+.+.|+|||.+++.-.
T Consensus 256 ~gg~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 256 DGGVNFALESTGS--------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp TSCEEEEEECSCC--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEeCC
Confidence 1379999865331 1467888999999999988644
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.39 E-value=0.13 Score=45.93 Aligned_cols=100 Identities=18% Similarity=0.030 Sum_probs=64.9
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccC----CCC-CCC
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL----QDF-TPE 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~----~~~-~~~ 227 (280)
..++.+||-.|+|. |..+..+++... ..|+++|.++.-++.+++.-... .+++...|+ .+. ...
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---------vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA---------TVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---------EECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---------EECCCCcCHHHHHHhhhhcc
Confidence 45678999999875 777777776644 37999999999999988753221 011101111 110 011
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
.+.+|+|+-+-.- ...++.+.++|++||.+++.-..
T Consensus 251 ~gg~Dvvid~~G~--------~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 251 PGGVDVVIECAGV--------AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp TTCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCCCEEEECCCC--------HHHHHHHHHHhccCCEEEEEecc
Confidence 2479999865321 14778889999999999886443
No 317
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.12 E-value=0.029 Score=49.11 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=58.5
Q ss_pred CCccEEEeecCccHHHHHHH----HhcCC---cEEEEeCC------------HHHHHHHHHHcCcCCCCCCCCCcceeEE
Q 023562 157 QHLVALDCGSGIGRITKNLL----IRYFN---EVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFF 217 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~----~~~~~---~v~~vD~S------------~~~l~~A~~~~~~~~~~~~~~~~~i~~~ 217 (280)
+..+|||+|-|+|......+ +.... +++.+|.. ....+......... .......++.
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~----~~~~v~L~l~ 171 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY----EGERLSLKVL 171 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE----ECSSEEEEEE
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc----cCCcEEEEEE
Confidence 44689999999998654322 22332 34555531 11111122221110 0112356677
Q ss_pred EccCCCC-C-CCCCcEEEEEccc-hhhcCChhhH--HHHHHHHHHcCCCCcEEE
Q 023562 218 CVPLQDF-T-PETGRYDVIWVQW-CIGHLTDDDF--VSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 218 ~~d~~~~-~-~~~~~fDlV~~~~-~l~~~~~~d~--~~~l~~~~r~LkpGG~li 266 (280)
.+|+.+. + .+..+||+|+.-. +-..- +++ ..+++.++++++|||.+.
T Consensus 172 ~GDa~~~l~~l~~~~~Da~flDgFsP~kN--PeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 172 LGDARKRIKEVENFKADAVFHDAFSPYKN--PELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp ESCHHHHGGGCCSCCEEEEEECCSCTTTS--GGGGSHHHHHHHHTTEEEEEEEE
T ss_pred echHHHHHhhhcccceeEEEeCCCCcccC--cccCCHHHHHHHHHHhCCCcEEE
Confidence 7877553 2 3335899998753 22221 233 689999999999999875
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.89 E-value=0.063 Score=47.31 Aligned_cols=94 Identities=18% Similarity=0.057 Sum_probs=63.8
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCC
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 229 (280)
..++.+||-.|+|. |..+..+++....+|+++|.+++-++.+++.-.. ..+...-.++. ...+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAE------------VAVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC------------EEEeCCCcCHHHHHHHhCC
Confidence 56778999999975 8888888876555899999999999998775322 11111111110 0013
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+|+|+....- ...++.+.+.|+|+|.+++.
T Consensus 232 ~~d~vid~~g~--------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTAVS--------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESSCC--------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEeCCC--------HHHHHHHHHHhccCCEEEEe
Confidence 68988765321 15778888999999999875
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.86 E-value=0.062 Score=48.57 Aligned_cols=99 Identities=10% Similarity=-0.131 Sum_probs=64.5
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-C------
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T------ 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~------ 225 (280)
..++.+||-+|||. |.++..+++.... +|+++|.|+..++.+++.- .+.+...-.++ .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-------------a~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-------------FETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-------------CEEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-------------CcEEcCCCcchHHHHHHHH
Confidence 55778999999987 8888888775443 7999999999999887531 11222111111 0
Q ss_pred CCCCcEEEEEccchhh---------cCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 PETGRYDVIWVQWCIG---------HLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~---------~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.....||+|+-.-.-. |.+ ....++.+.++|++||.+++.-
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~---~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTET---PNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBC---TTHHHHHHHHHEEEEEEEECCS
T ss_pred hCCCCCCEEEECCCCccccccccccccc---cHHHHHHHHHHHhcCCEEEEec
Confidence 0112699998653321 111 1246888899999999988753
No 320
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.77 E-value=0.025 Score=50.23 Aligned_cols=68 Identities=19% Similarity=0.177 Sum_probs=53.8
Q ss_pred ccEEEeecCccHHHHHHHHhcC--CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC---CCcEEE
Q 023562 159 LVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYDV 233 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~~~--~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fDl 233 (280)
.+++|+-||.|.++..+.+.++ ..|.++|+++.+++.-+.++.. ..++..|+.++... ...+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-----------TNLLNRNIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECCCGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-----------CceeccccccCCHHHhccCCCCE
Confidence 5899999999999999988886 5789999999999999998754 33567787776421 136899
Q ss_pred EEcc
Q 023562 234 IWVQ 237 (280)
Q Consensus 234 V~~~ 237 (280)
++..
T Consensus 73 l~gg 76 (333)
T 4h0n_A 73 ILMS 76 (333)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9843
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.67 E-value=0.056 Score=49.31 Aligned_cols=48 Identities=23% Similarity=0.320 Sum_probs=40.7
Q ss_pred CCCCccEEEeecCccHHHHHHH-HhcC--CcEEEEeCCHHHHHHHHHHcCc
Q 023562 155 NNQHLVALDCGSGIGRITKNLL-IRYF--NEVDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G~~s~~l~-~~~~--~~v~~vD~S~~~l~~A~~~~~~ 202 (280)
..++..|+|+||+.|..+..++ ..+. .+|.++|+++...+..++++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 3567899999999999999887 4443 4899999999999999988765
No 322
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.56 E-value=0.16 Score=45.01 Aligned_cols=95 Identities=16% Similarity=-0.002 Sum_probs=63.6
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-+|+|. |..+..+++.... .|+++|.+++-++.+++.-... ++...-.++. .
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~------------vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD------------IINYKNGDIVEQILKAT 231 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE------------EECGGGSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce------------EEcCCCcCHHHHHHHHc
Confidence 56778999999876 7777777766443 7999999999999998764321 1111111110 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
....+|+|+-.-.- + ..++.+.+.|+|||.+++.-
T Consensus 232 ~g~g~D~v~d~~g~-----~---~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD-----V---HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTCCEEEEEECSSC-----T---THHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC-----h---HHHHHHHHHHhcCCEEEEec
Confidence 22369999864321 1 46778889999999998764
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.45 E-value=0.054 Score=47.94 Aligned_cols=91 Identities=15% Similarity=0.034 Sum_probs=63.2
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+||-+|+|. |..+..+++....+|++++.+++-++.+++.-.. . ++ .+...+. ..+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-----------~-v~-~~~~~~~---~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK-----------H-FY-TDPKQCK---EELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCS-----------E-EE-SSGGGCC---SCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCC-----------e-ec-CCHHHHh---cCCCE
Confidence 56778999999875 7777777776444799999999999988774222 1 11 2222222 27999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+-+-.- + ..++.+.+.|+|+|.+++.-
T Consensus 238 vid~~g~-----~---~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPT-----H---YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCS-----C---CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCc-----H---HHHHHHHHHHhcCCEEEEEC
Confidence 9864331 1 25667888999999998863
No 324
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.45 E-value=0.09 Score=46.12 Aligned_cols=93 Identities=9% Similarity=0.030 Sum_probs=61.4
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC---CC----
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FT---- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~---~~---- 225 (280)
..++.+||-.|| |.|..+..++.....+|+++|.++..++.+++. ... ...|..+ +.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~~-------------~~~d~~~~~~~~~~~~ 208 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI-GFD-------------AAFNYKTVNSLEEALK 208 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCS-------------EEEETTSCSCHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCc-------------EEEecCCHHHHHHHHH
Confidence 556789999998 677777767665444799999999988888443 110 1112222 10
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
...+.+|+++.+-. . ..++.+.+.|++||.+++.-.
T Consensus 209 ~~~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 209 KASPDGYDCYFDNVG-------G--EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHCTTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECCC
T ss_pred HHhCCCCeEEEECCC-------h--HHHHHHHHHHhcCCEEEEEec
Confidence 01147999986643 1 246778899999999987643
No 325
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.39 E-value=0.13 Score=46.42 Aligned_cols=46 Identities=24% Similarity=0.333 Sum_probs=36.5
Q ss_pred CCccEEEeecCccHHHHHHHHhc------CC--cEEEEeCCHHHHHHHHHHcCc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY------FN--EVDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~------~~--~v~~vD~S~~~l~~A~~~~~~ 202 (280)
.+..|+|+|.|.|.++..+++.. +. +++.||+|+...+.=++++..
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 45689999999999998887531 12 799999999999877777654
No 326
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.31 E-value=0.26 Score=43.65 Aligned_cols=98 Identities=16% Similarity=0.082 Sum_probs=62.1
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEE---EccC-CCCC-CC
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF---CVPL-QDFT-PE 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~---~~d~-~~~~-~~ 227 (280)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-... -+++. ..++ +.+. ..
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---------vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL---------VLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE---------EEECSSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE---------EEcCcccccchHHHHHHHHh
Confidence 55678999999875 7778878775444 7999999999999887642210 01110 0000 0000 00
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
...+|+|+-.-.- . ..+..+.++|+|||.+++.-
T Consensus 240 ~~g~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTGA------E--ASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC------h--HHHHHHHHHhcCCCEEEEEe
Confidence 1468998754321 1 46778889999999998763
No 327
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.31 E-value=0.15 Score=44.95 Aligned_cols=95 Identities=14% Similarity=0.004 Sum_probs=61.3
Q ss_pred CCCCccEEEeecC--ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG--~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-.|+| .|..+..+++....+|++++.++.-++.+++.-.. ..+...-.++. .
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~------------~~~~~~~~~~~~~~~~~~ 209 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA------------YVIDTSTAPLYETVMELT 209 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc------------EEEeCCcccHHHHHHHHh
Confidence 5677899999987 67777777765444799999999999988875322 11111111110 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
....+|+|+.+-.- +. +....+.|+|||.+++.-.
T Consensus 210 ~~~g~Dvvid~~g~-----~~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 210 NGIGADAAIDSIGG-----PD----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp TTSCEEEEEESSCH-----HH----HHHHHHTEEEEEEEEECCC
T ss_pred CCCCCcEEEECCCC-----hh----HHHHHHHhcCCCEEEEEee
Confidence 12479999865331 11 2334489999999988644
No 328
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.26 E-value=0.24 Score=43.74 Aligned_cols=95 Identities=15% Similarity=-0.021 Sum_probs=61.7
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc-CCCCC------C
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d-~~~~~------~ 226 (280)
..++.+||-+|+|. |..+..+++....+|+++|.++.-++.+++.-.. ..+..+ -.++. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD------------VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EEEECCTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC------------EEEcCcccccHHHHHHHHh
Confidence 45678999999875 6777777765444599999999999988764221 111111 01110 0
Q ss_pred C---CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 E---TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~---~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
. ...+|+|+-+-.- ...++.+.+.|+|+|.+++.-
T Consensus 234 ~~~~g~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGN--------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHSSSCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECS
T ss_pred ccccCCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 0 1468998865321 136778889999999998763
No 329
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.81 E-value=0.19 Score=44.11 Aligned_cols=95 Identities=11% Similarity=-0.011 Sum_probs=62.6
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----CC
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (280)
..++.+||-.|| |.|..+..+++....+|++++.+++-++.+.+.+... ..+...-.++. ..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD-----------GAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS-----------EEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC-----------EEEECCCHHHHHHHHHhc
Confidence 567789999998 6778888777664448999999999888884333211 11111111110 01
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.+.+|+|+.+-. . ..+..+.+.|++||.+++.-
T Consensus 216 ~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 216 PKGIDVFFDNVG-------G--EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCC-------c--chHHHHHHHHhhCCEEEEEe
Confidence 246999986533 1 36788889999999998863
No 330
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.74 E-value=0.28 Score=43.06 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=62.7
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCC---CCC----
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---DFT---- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~---~~~---- 225 (280)
..++.+||-.|| |.|..+..++.....+|++++.++..++.+++.+... ..+ |.. ++.
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~-----------~~~--d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD-----------DAF--NYKEESDLTAALK 219 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS-----------EEE--ETTSCSCSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc-----------eEE--ecCCHHHHHHHHH
Confidence 556789999997 6777777777654447999999999988887443211 011 221 110
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
...+.+|+|+.+-. . ..++.+.+.|++||.+++.-
T Consensus 220 ~~~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 220 RCFPNGIDIYFENVG-------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HHCTTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred HHhCCCCcEEEECCC-------H--HHHHHHHHHHhcCCEEEEEc
Confidence 01146999986543 1 36778889999999998763
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.65 E-value=0.25 Score=43.89 Aligned_cols=96 Identities=14% Similarity=-0.052 Sum_probs=64.0
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------CC
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PE 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~ 227 (280)
..++.+||-+|+|. |..+..+++....+|++++.++.-++.+++.-.. .++..+-.++. ..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~~~ 254 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD------------HGINRLEEDWVERVYALTG 254 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC------------EEEcCCcccHHHHHHHHhC
Confidence 56778999999875 7777777766545799999999999998775322 11111111110 11
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
...+|+|+-+-. . ..+..+.+.|+|||.+++.-..
T Consensus 255 g~g~D~vid~~g----~-----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 255 DRGADHILEIAG----G-----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp TCCEEEEEEETT----S-----SCHHHHHHHEEEEEEEEEECCC
T ss_pred CCCceEEEECCC----h-----HHHHHHHHHhhcCCEEEEEecC
Confidence 237999986533 1 2466678899999999987443
No 332
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.50 E-value=0.2 Score=44.51 Aligned_cols=97 Identities=19% Similarity=0.024 Sum_probs=64.2
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEE-----ccCCC-CC-
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-----VPLQD-FT- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~-----~d~~~-~~- 225 (280)
..++.+||-+|+|. |..+..+++.... .|.++|.|++-++.+++. ... .+++.. .++.+ +.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~---------~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE---------VVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT---------CEEEECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh---------cccccccccchHHHHHHHHH
Confidence 55778999999865 7777777766443 599999999999999987 421 122221 11100 00
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.....+|+|+-+-.- . ..++.+.++|++||.+++.-
T Consensus 247 ~t~g~g~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV------E--SSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCC------h--HHHHHHHHHhcCCCEEEEEc
Confidence 112468999865331 1 46788889999999998863
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.39 E-value=0.26 Score=44.37 Aligned_cols=100 Identities=9% Similarity=-0.088 Sum_probs=64.6
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CC------
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT------ 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~------ 225 (280)
..++.+||-+|||. |.++..+++.... .|+++|.++.-++.+++.-. +.+...-.+ +.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa-------------~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-------------EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------------EEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC-------------cEEccCCcchHHHHHHHH
Confidence 55778999999876 7788888776443 69999999999999976421 112111011 10
Q ss_pred CCCCcEEEEEccchhh---------cCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 PETGRYDVIWVQWCIG---------HLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~---------~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.....+|+|+-+-.-. |.+ +....++.+.++|++||.+++.-
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHE--APATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSB--CTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCccccccccccccc--chHHHHHHHHHHHhcCCEEEEec
Confidence 0113699998653211 111 12257888899999999998764
No 334
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.38 E-value=0.26 Score=43.36 Aligned_cols=92 Identities=18% Similarity=0.098 Sum_probs=60.8
Q ss_pred CCCCccEEEeecC-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC------
Q 023562 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (280)
Q Consensus 155 ~~~~~~VLDlGcG-~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------ 227 (280)
..++.+||-+|+| .|..+..+++....+|++++.++.-++.+++.-.. ...|..+....
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~--------------~~~d~~~~~~~~~~~~~ 227 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGAD--------------LVVNPLKEDAAKFMKEK 227 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS--------------EEECTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCC--------------EEecCCCccHHHHHHHH
Confidence 4567899999986 47777777765444799999999999988753211 11122211100
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+.+|+|+.+-.. ...++.+.+.|+++|.+++.
T Consensus 228 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 228 VGGVHAAVVTAVS--------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HSSEEEEEESSCC--------HHHHHHHHHHEEEEEEEEEC
T ss_pred hCCCCEEEECCCC--------HHHHHHHHHHhhcCCEEEEe
Confidence 0369999865331 14677888999999998875
No 335
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.32 E-value=0.29 Score=42.82 Aligned_cols=94 Identities=19% Similarity=0.111 Sum_probs=62.6
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-.|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..+...-.++. .
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE------------YLINASKEDILRQVLKFT 213 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc------------EEEeCCCchHHHHHHHHh
Confidence 567789999994 667777777766445799999999999988764221 11111111110 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
....+|+|+.+-.- ..++.+.+.|+|||.+++.-
T Consensus 214 ~~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 214 NGKGVDASFDSVGK---------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TTSCEEEEEECCGG---------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhccCCEEEEEc
Confidence 12469999865431 35667788999999998863
No 336
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.27 E-value=0.28 Score=42.76 Aligned_cols=96 Identities=11% Similarity=0.007 Sum_probs=63.6
Q ss_pred CCCCccEEEee--cCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlG--cG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-.| .|.|..+..+++....+|++++.+++-++.+++.-.. ..+...-.++. .
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW------------ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEeCCCccHHHHHHHHh
Confidence 55778999998 4567888777766444799999999999988865321 11111111110 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
....+|+|+.+-.- ..+..+.+.|++||.+++.-..
T Consensus 206 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ---------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp TTCCEEEEEESSCG---------GGHHHHHTTEEEEEEEEECCCT
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhcCCCEEEEEecC
Confidence 12479999865331 2566778899999999987443
No 337
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.25 E-value=0.15 Score=45.67 Aligned_cols=95 Identities=17% Similarity=0.028 Sum_probs=61.6
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc-CCCCCCCCCcEE
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYD 232 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d-~~~~~~~~~~fD 232 (280)
..++.+||-+|+|. |..+..+++....+|++++.|+.-++.+++.-... -++....+ +..+. +.+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~---------vi~~~~~~~~~~~~---~g~D 259 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE---------VVNSRNADEMAAHL---KSFD 259 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE---------EEETTCHHHHHTTT---TCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE---------EeccccHHHHHHhh---cCCC
Confidence 55778999999985 77777777654446999999999999988642210 01100001 11111 4799
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+|+-.-.-. ..++.+.+.|+|+|.+++.-
T Consensus 260 vvid~~g~~--------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 260 FILNTVAAP--------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEECCSSC--------CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCCH--------HHHHHHHHHhccCCEEEEec
Confidence 998653311 24566788999999988753
No 338
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.19 E-value=0.19 Score=44.12 Aligned_cols=58 Identities=7% Similarity=-0.047 Sum_probs=45.5
Q ss_pred HHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcC
Q 023562 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (280)
Q Consensus 140 ~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~ 203 (280)
.++..++... ..++..|||.-||+|..+....+.+. +..|+|+++.+.+.+++++...
T Consensus 240 ~l~~~~i~~~-----~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 240 KLPEFFIRML-----TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp HHHHHHHHHH-----CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCS
T ss_pred HHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhc
Confidence 4555555432 34677899999999999987665554 6999999999999999998764
No 339
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.16 E-value=0.23 Score=43.84 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=61.6
Q ss_pred CCCCccEEEeecC--ccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-----CC
Q 023562 155 NNQHLVALDCGSG--IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TP 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG--~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~~ 226 (280)
..++.+||-.|+| .|..+..++... ..+|.++|.++..++.+++.-.. .++...-.++ ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD------------YVINASMQDPLAEIRRI 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC------------EEecCCCccHHHHHHHH
Confidence 4567899999998 666666666654 44799999999999988764211 1111110111 00
Q ss_pred CC-CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 ET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~~-~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.. +.+|+|+.+-.- ...++.+.+.|+|+|.+++.-
T Consensus 236 ~~~~~~d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS--------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTTSCEEEEEESCCC--------HHHHTTGGGGEEEEEEEEECC
T ss_pred hcCCCceEEEECCCC--------HHHHHHHHHHHhcCCEEEEEC
Confidence 11 479999865331 146778889999999998754
No 340
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.12 E-value=0.63 Score=41.93 Aligned_cols=100 Identities=12% Similarity=-0.056 Sum_probs=60.2
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-+|+|. |..+..+++.... .|+++|.++.-++.+++.-... ++...-.++. .
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~------------vi~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH------------VIDPTKENFVEAVLDYT 278 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE------------EECTTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE------------EEcCCCCCHHHHHHHHh
Confidence 56778999999864 6667777765443 7999999999999998763321 1111101110 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
....+|+|+-+-.-. ...+..+++.+.+.+++||.+++.-
T Consensus 279 ~g~g~D~vid~~g~~---~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 279 NGLGAKLFLEATGVP---QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp TTCCCSEEEECSSCH---HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 123699998543210 0012234444446669999998863
No 341
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.09 E-value=0.61 Score=41.01 Aligned_cols=93 Identities=16% Similarity=0.051 Sum_probs=60.7
Q ss_pred CCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------CCC
Q 023562 157 QHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PET 228 (280)
Q Consensus 157 ~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 228 (280)
++.+||-+|+|. |..+..+++.... +|++++.++.-++.+++.-... .+..+-.++. ...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~------------~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY------------VINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE------------EECTTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE------------EECCCCcCHHHHHHHHcCC
Confidence 778999999863 6677777765444 7999999999999887643210 1111101110 112
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
..+|+|+.+-.. ...++.+.+.|+++|.+++.-
T Consensus 235 ~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 235 NGVDVFLEFSGA--------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp SCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 369999865331 146778889999999998764
No 342
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.02 E-value=0.35 Score=42.51 Aligned_cols=93 Identities=11% Similarity=-0.024 Sum_probs=62.8
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-------
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (280)
..++.+||-.|+ |.|..+..++.....+|++++.++..++.+++.-.. ..+ |..+..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~------------~~~--d~~~~~~~~~~~~ 229 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGAD------------ETV--NYTHPDWPKEVRR 229 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EEE--ETTSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC------------EEE--cCCcccHHHHHHH
Confidence 556789999998 678888878776444799999999999988753211 111 221110
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.....+|+|+.+-. . ..++.+.+.|+++|.+++.-.
T Consensus 230 ~~~~~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 230 LTGGKGADKVVDHTG-A--------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp HTTTTCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEESSC
T ss_pred HhCCCCceEEEECCC-H--------HHHHHHHHhhccCCEEEEEec
Confidence 11247999986643 1 246677889999999987643
No 343
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.96 E-value=0.39 Score=42.48 Aligned_cols=92 Identities=12% Similarity=0.038 Sum_probs=60.7
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-------
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (280)
..++.+||-.|+ |.|..+..++.....+|++++.+++-++.+++.-.. .. .|..+..
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~--~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH------------EV--FNHREVNYIDKIKK 233 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EE--EETTSTTHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC------------EE--EeCCCchHHHHHHH
Confidence 556789999997 667777777765444799999999988877653211 11 1221111
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.....+|+|+.+-. . ..+..+.++|+|+|.+++.-
T Consensus 234 ~~~~~~~D~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLA-------N--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESCH-------H--HHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECCC-------h--HHHHHHHHhccCCCEEEEEe
Confidence 11236999987643 1 24667789999999998753
No 344
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.95 E-value=0.19 Score=44.29 Aligned_cols=95 Identities=15% Similarity=-0.001 Sum_probs=64.4
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-+|+|. |..+..+++.. ..+|+++|.+++-++.+++.-.. .++..+ .++. .
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~------------~~i~~~-~~~~~~v~~~t 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD------------AAVKSG-AGAADAIRELT 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS------------EEEECS-TTHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC------------EEEcCC-CcHHHHHHHHh
Confidence 45678999999876 77778787664 56899999999999999875322 111111 1110 0
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
....+|+|+-+-.- . ..++.+.+.|++||.+++.-.
T Consensus 236 ~g~g~d~v~d~~G~------~--~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 236 GGQGATAVFDFVGA------Q--STIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GGGCEEEEEESSCC------H--HHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCeEEEECCCC------H--HHHHHHHHHHhcCCEEEEECC
Confidence 11369999864331 1 478888999999999988643
No 345
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.85 E-value=0.048 Score=48.20 Aligned_cols=95 Identities=14% Similarity=-0.055 Sum_probs=61.9
Q ss_pred CCccEEEeecCc-cHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEE-cc-CCCCCCCCCcE
Q 023562 157 QHLVALDCGSGI-GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VP-LQDFTPETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~-G~~s~~l~~~~--~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~-~d-~~~~~~~~~~f 231 (280)
++.+||-+|+|. |..+..+++.. ..+|++++.|++-++.+++.-... -++... .+ +..+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---------vi~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADY---------VSEMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSE---------EECHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCE---------EeccccchHHHHHhh-cCCCc
Confidence 678999999874 67777777665 447999999999999988753221 011101 11 11111 12379
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|+-.-.- ...++.+.+.|+|||.+++.-
T Consensus 240 D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 240 SIAIDLVGT--------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEESSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred cEEEECCCC--------hHHHHHHHHHhhcCCEEEEeC
Confidence 999865331 146788889999999998763
No 346
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.75 E-value=0.81 Score=40.60 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=62.4
Q ss_pred CCccEEEee--cCccHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeE---EEccCCCCCCCCCc
Q 023562 157 QHLVALDCG--SGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF---FCVPLQDFTPETGR 230 (280)
Q Consensus 157 ~~~~VLDlG--cG~G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~---~~~d~~~~~~~~~~ 230 (280)
++.+||-.| .|.|..+..+++. +..+|++++.+++-++.+++.-... -++. ....+.++ ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~---------vi~~~~~~~~~v~~~--~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHH---------VIDHSKPLAAEVAAL--GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSE---------EECTTSCHHHHHHTT--CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCE---------EEeCCCCHHHHHHHh--cCCC
Confidence 567899998 3558888888876 4558999999999999987642221 0000 00011111 2357
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+|+|+-+-. -...++.+.++|+|+|.+++.
T Consensus 240 ~Dvvid~~g--------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH--------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC--------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC--------chhhHHHHHHHhcCCCEEEEE
Confidence 999986432 114778889999999999886
No 347
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.75 E-value=0.39 Score=41.79 Aligned_cols=93 Identities=13% Similarity=0.017 Sum_probs=61.4
Q ss_pred CCCCccEEEee--cCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-------
Q 023562 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (280)
Q Consensus 155 ~~~~~~VLDlG--cG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (280)
..++.+||-.| +|.|..+..++.....+|++++.++..++.+++.-.. .. .|..+..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~------------~~--~~~~~~~~~~~~~~ 203 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW------------QV--INYREEDLVERLKE 203 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EE--EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC------------EE--EECCCccHHHHHHH
Confidence 55678999999 5667777766665334799999999988888763211 01 1221110
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.....+|+|+.+-. . ..++.+.+.|++||.+++.-.
T Consensus 204 ~~~~~~~D~vi~~~g----~-----~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG----R-----DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HTTTCCEEEEEECSC----G-----GGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCc----h-----HHHHHHHHHhcCCCEEEEEec
Confidence 11236999986643 1 356778899999999987643
No 348
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.67 E-value=0.76 Score=34.68 Aligned_cols=92 Identities=13% Similarity=0.035 Sum_probs=56.3
Q ss_pred CccEEEeecCc-cHH-HHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCcE
Q 023562 158 HLVALDCGSGI-GRI-TKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (280)
Q Consensus 158 ~~~VLDlGcG~-G~~-s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~f 231 (280)
..+|+=+|||. |.. +..|.+.+. .|+++|.+++.++.+++. .+.++.+|..+.. ..-..+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~-------------g~~~i~gd~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER-------------GVRAVLGNAANEEIMQLAHLECA 72 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------------TCEEEESCTTSHHHHHHTTGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc-------------CCCEEECCCCCHHHHHhcCcccC
Confidence 35799999865 332 223333455 599999999999887652 2456777776532 112468
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|+|++... ++.....+-...+.+.|+..++..
T Consensus 73 d~vi~~~~-----~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 73 KWLILTIP-----NGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp SEEEECCS-----CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CEEEEECC-----ChHHHHHHHHHHHHHCCCCeEEEE
Confidence 88876533 122223344456777888877664
No 349
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.54 E-value=0.54 Score=41.79 Aligned_cols=95 Identities=15% Similarity=0.010 Sum_probs=61.6
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc-C-CCCC-----
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-L-QDFT----- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d-~-~~~~----- 225 (280)
..++.+||-+|+|. |..+..+++.... .|+++|.|+.-++.+++.-.. .++... . .++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT------------DFVNPNDHSEPISQVLSK 257 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc------------eEEeccccchhHHHHHHH
Confidence 55678999999865 6777777765443 799999999999988764221 011111 0 1110
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (280)
...+.+|+|+-+-.- ...++.+.++|+|| |.+++.-
T Consensus 258 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN--------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEc
Confidence 001368998754321 14678889999999 9998763
No 350
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.29 E-value=0.17 Score=50.01 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=40.0
Q ss_pred CCCccEEEeecCccHHHHHHHHhc------CCcEEEEeCCHHHHHHHHHHcCc
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~------~~~v~~vD~S~~~l~~A~~~~~~ 202 (280)
.+..+|+|+=||.|.++..|.+.+ +..+.++|+++.+++.-+.|+..
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~ 262 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ 262 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC
Confidence 445789999999999999887765 55788999999999999888754
No 351
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.21 E-value=0.45 Score=41.87 Aligned_cols=93 Identities=11% Similarity=-0.018 Sum_probs=61.9
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCC---CCC----
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---DFT---- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~---~~~---- 225 (280)
..++.+||-.|+ |.|..+..++.....+|++++.++..++.+++.-.. ...|.. ++.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~--------------~~~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE--------------VFIDFTKEKDIVGAVL 232 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC--------------EEEETTTCSCHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc--------------eEEecCccHhHHHHHH
Confidence 556789999998 577777777765444799999998888877653111 111322 110
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
...+.+|+|+.+-.. ...++.+.+.|+++|.+++.-
T Consensus 233 ~~~~~~~D~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS--------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHTSCEEEEEECSSC--------HHHHHHHTTSEEEEEEEEECC
T ss_pred HHhCCCCCEEEECCCc--------HHHHHHHHHHHhcCCEEEEEe
Confidence 001269999876431 146788899999999998753
No 352
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.13 E-value=0.53 Score=41.58 Aligned_cols=95 Identities=17% Similarity=0.038 Sum_probs=60.7
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-.|+ |.|..+..++.....+|++++.+++.++.+++.-.. ..+..+-.++. .
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA------------AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc------------EEEecCChHHHHHHHHHh
Confidence 556789999984 667777777765444799999999999888654211 01111111110 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
....+|+|+.+-.- ..+..+.++|++||.+++.-.
T Consensus 228 ~~~~~d~vi~~~G~---------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 228 KGAGVNLILDCIGG---------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp TTSCEEEEEESSCG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred cCCCceEEEECCCc---------hHHHHHHHhccCCCEEEEEec
Confidence 12469999866431 135667789999999988643
No 353
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.12 E-value=0.64 Score=41.27 Aligned_cols=95 Identities=16% Similarity=0.004 Sum_probs=61.6
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc-cC-CCCC-----
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~-d~-~~~~----- 225 (280)
..++.+||-+|+|. |..+..+++.. ...|+++|.|+.-++.+++.-... ++.. +. .++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~------------vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE------------CINPQDFSKPIQEVLIE 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE------------EECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce------------EeccccccccHHHHHHH
Confidence 55678999999865 66777777654 437999999999999988653220 1111 10 1110
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (280)
...+.+|+|+-+-.- ...++.+.+.|+|+ |.+++.-
T Consensus 256 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIGN--------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCc--------HHHHHHHHHhhccCCcEEEEEe
Confidence 111368998855321 14678889999999 9998753
No 354
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.11 E-value=0.6 Score=41.51 Aligned_cols=95 Identities=13% Similarity=-0.094 Sum_probs=61.7
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc-C-CCCC-----
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-L-QDFT----- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d-~-~~~~----- 225 (280)
..++.+||-+|+|. |..+..+++.. ...|+++|.++.-++.+++.-.. .++... . .++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT------------ECLNPKDYDKPIYEVICE 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc------------EEEecccccchHHHHHHH
Confidence 55678999999875 67777777654 43799999999999988764221 011111 0 1110
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (280)
...+.+|+|+-.-.- ...++.+.++|+++ |.+++.-
T Consensus 257 ~t~gg~Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR--------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCCCEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEc
Confidence 011368999854321 14678888999999 9998753
No 355
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.09 E-value=0.18 Score=48.83 Aligned_cols=111 Identities=13% Similarity=0.139 Sum_probs=65.5
Q ss_pred CCccEEEeecCccHHHHHHHHhc-----------CC--cEEEEeC---CHHHHHHHHHHcCc-----------CCCCC--
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY-----------FN--EVDLLEP---VSHFLDAARESLAP-----------ENHMA-- 207 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~-----------~~--~v~~vD~---S~~~l~~A~~~~~~-----------~~~~~-- 207 (280)
+..+|||+|-|+|......++.. .. +++.+|. +.+.+..+-+.... .....
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34689999999998777665432 11 5888998 77777744332111 10000
Q ss_pred ------CCCCcceeEEEccCCCC-C-CC---CCcEEEEEccchhhcCChhhH-HHHHHHHHHcCCCCcEEEE
Q 023562 208 ------PDMHKATNFFCVPLQDF-T-PE---TGRYDVIWVQWCIGHLTDDDF-VSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 208 ------~~~~~~i~~~~~d~~~~-~-~~---~~~fDlV~~~~~l~~~~~~d~-~~~l~~~~r~LkpGG~lii 267 (280)
..-...++...+|+.+. + .. ...||+|+.-..--...++-+ ..+++.++++++|||.+.-
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 00013455666665442 1 11 367999987532222222222 5899999999999998764
No 356
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.08 E-value=0.5 Score=42.13 Aligned_cols=96 Identities=15% Similarity=-0.008 Sum_probs=62.9
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc--CCCCC-----
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP--LQDFT----- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d--~~~~~----- 225 (280)
..++.+||-+|+|. |..+..+++. +..+|+++|.++.-++.+++.-.. .++... -.++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN------------EFVNPKDHDKPIQEVIVD 258 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc------------EEEccccCchhHHHHHHH
Confidence 56778999999874 7777777765 444799999999999988764322 011111 01110
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCC-cEEEEEec
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKEN 270 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e~ 270 (280)
...+.+|+|+-+-.- ...+..+.+.|++| |.+++.-.
T Consensus 259 ~~~gg~D~vid~~g~--------~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 259 LTDGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred hcCCCCCEEEECCCC--------HHHHHHHHHHhhccCCEEEEEcc
Confidence 112379999865321 14788889999997 99988643
No 357
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.01 E-value=0.27 Score=43.23 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=45.5
Q ss_pred hHHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCH---HHHHHHHHHcCcC
Q 023562 138 SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPE 203 (280)
Q Consensus 138 ~~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~---~~l~~A~~~~~~~ 203 (280)
+..++..++... ..++..|||.-||+|..+....+.+. +..|+|+++ ..++.+++++...
T Consensus 228 p~~l~~~~i~~~-----~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 228 PAAVIERLVRAL-----SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CHHHHHHHHHHH-----SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHh-----CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHc
Confidence 345666666432 34677999999999999997776655 699999999 9999999998763
No 358
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.97 E-value=0.74 Score=40.93 Aligned_cols=95 Identities=13% Similarity=-0.075 Sum_probs=61.3
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc-cC-CCCC-----
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~-d~-~~~~----- 225 (280)
..++.+||-+|+|. |..+..+++.... +|+++|.+++-++.+++.-.. ..+.. +. .++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT------------DCLNPRELDKPVQDVITE 260 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc------------EEEccccccchHHHHHHH
Confidence 55678999999874 6777777766444 799999999999988764221 01111 00 1110
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (280)
...+.+|+|+-+-.- ...++.+.+.|++| |.+++.-
T Consensus 261 ~~~~g~Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHTSCBSEEEESSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCccEEEECCCC--------HHHHHHHHHHhhcCCCEEEEEC
Confidence 001368998754321 14678889999999 9998753
No 359
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.87 E-value=0.66 Score=41.12 Aligned_cols=95 Identities=12% Similarity=-0.019 Sum_probs=63.3
Q ss_pred CCCCccEEEee--cCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----CC
Q 023562 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (280)
Q Consensus 155 ~~~~~~VLDlG--cG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (280)
..++.+||-.| .|.|..+..+++....+|++++.+++-++.+++.-.. ..+..+-.++. ..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCD------------RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCc------------EEEecCChhHHHHHHHhc
Confidence 45678999999 5778888888776444799999999988888763211 11111111110 01
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
...+|+|+.+-. . ..++.+.+.|+++|.+++.-.
T Consensus 229 ~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 229 PEGVDVVYESVG-------G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp TTCEEEEEECSC-------T--HHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCC-------H--HHHHHHHHHHhcCCEEEEEeC
Confidence 246999986533 1 467788899999999988643
No 360
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.87 E-value=0.29 Score=43.03 Aligned_cols=90 Identities=17% Similarity=0.094 Sum_probs=59.0
Q ss_pred CCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC--CC-----CC
Q 023562 157 QHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD--FT-----PE 227 (280)
Q Consensus 157 ~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~-----~~ 227 (280)
++.+||-+|+|. |..+..+++.... +|++++.+++-++.+++. ... . .|..+ +. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~------------v--~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR------------L--VNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE------------E--ECTTTSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh------------c--cCcCccCHHHHHHHhc
Confidence 678999999854 6677777765444 799999999888777654 221 1 11111 10 00
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
...+|+|+-.-.- ...++.+.+.|+++|.+++.-
T Consensus 229 ~~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSGN--------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 2469999865331 146778889999999988753
No 361
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.87 E-value=0.35 Score=42.60 Aligned_cols=93 Identities=13% Similarity=0.038 Sum_probs=62.8
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-.|+ |.|..+..+++....+|++++.++.-++.+++.-.. .++..+ .++. .
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGAD------------IVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS------------EEEESS-TTHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc------------EEecCc-hhHHHHHHHHh
Confidence 567789999997 667888888776555799999999999888875322 112222 2211 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
....+|+|+-+-.- ..+..+.+.|++||.+++.-
T Consensus 224 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 224 GGAGVDMVVDPIGG---------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTSCEEEEEESCC-----------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCCceEEEECCch---------hHHHHHHHhhcCCCEEEEEE
Confidence 12369999865331 24667888999999998863
No 362
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.86 E-value=0.7 Score=41.06 Aligned_cols=95 Identities=13% Similarity=-0.054 Sum_probs=61.3
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc-C-CCCC-----
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-L-QDFT----- 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d-~-~~~~----- 225 (280)
..++.+||-+|+|. |..+..+++.... .|+++|.++.-++.+++.-.. .++... . .++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT------------ECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc------------eEecccccchhHHHHHHH
Confidence 55678999999875 6777777765443 799999999999988754221 011111 0 1110
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (280)
...+.+|+|+-+-.- ...++.+.++|+++ |.+++.-
T Consensus 257 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCCC--------HHHHHHHHHHhhcCCcEEEEec
Confidence 111368998754321 14677888999999 9988753
No 363
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.80 E-value=0.55 Score=40.99 Aligned_cols=93 Identities=13% Similarity=0.041 Sum_probs=61.7
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-------
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (280)
..++.+||-.|+ |.|..+..++.....+|++++.+++.++.+++.-.. ...|..+..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~--------------~~~d~~~~~~~~~i~~ 208 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH--------------HTINYSTQDFAEVVRE 208 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS--------------EEEETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC--------------EEEECCCHHHHHHHHH
Confidence 456789999995 678777777765444799999999888888763211 111222110
Q ss_pred -CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 -~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.....+|+|+.+-.- ..++.+.++|++||.+++.-.
T Consensus 209 ~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 209 ITGGKGVDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHTTCCEEEEEECSCT---------TTHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCCeEEEECCcH---------HHHHHHHHhhccCCEEEEEec
Confidence 112369999865431 356778899999999987643
No 364
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.61 E-value=0.34 Score=42.11 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=60.4
Q ss_pred cEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcEEEEEc
Q 023562 160 VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIWV 236 (280)
Q Consensus 160 ~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fDlV~~ 236 (280)
+||-.|+ |.|..+..+++....+|++++.|++-++.+++.-... -++ ..+.... ....+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---------vi~--~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANR---------ILS--RDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSE---------EEE--GGGSSCCCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE---------EEe--cCCHHHHHhhcCCCccEEEE
Confidence 4999996 6788888888765447999999999999998753221 011 1111111 112357999875
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+- . . ..++.+.++|+|+|.+++.-
T Consensus 218 ~~-----g--~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 218 TV-----G--D--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp SS-----C--H--HHHHHHHHTEEEEEEEEECC
T ss_pred CC-----C--c--HHHHHHHHHHhcCCEEEEEe
Confidence 42 2 2 37888899999999998863
No 365
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.57 E-value=0.27 Score=42.64 Aligned_cols=88 Identities=17% Similarity=0.106 Sum_probs=58.5
Q ss_pred CCCCccEEEeecC-ccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 155 ~~~~~~VLDlGcG-~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
..++.+||-.|+| .|..+..+++....+|++++ |++-++.+++.-.. .++. |.+.+ ...+|+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~v~~-d~~~v---~~g~Dv 202 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVR------------HLYR-EPSQV---TQKYFA 202 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEE------------EEES-SGGGC---CSCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCC------------EEEc-CHHHh---CCCccE
Confidence 5678899999996 37777777766444799999 99989988775322 1111 32222 368999
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|+-+-.- ..+..+.++|+|+|.+++.
T Consensus 203 v~d~~g~---------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 203 IFDAVNS---------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EECC----------------TTGGGEEEEEEEEEE
T ss_pred EEECCCc---------hhHHHHHHHhcCCCEEEEE
Confidence 9865321 1225577899999999886
No 366
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.38 E-value=0.11 Score=45.17 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=38.6
Q ss_pred ceeEEEccCCCC-C-CCCCcEEEEEccchhhcCC--------------h----hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 213 ATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLT--------------D----DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 213 ~i~~~~~d~~~~-~-~~~~~fDlV~~~~~l~~~~--------------~----~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+.++++|..+. . .++++||+|+++--..... . ..+..+++++.++|||||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 467889987663 2 3457999999883321110 0 12356888999999999998775
No 367
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.19 E-value=0.89 Score=41.67 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=62.7
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCC----------
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---------- 222 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~---------- 222 (280)
..++.+||-+|+ |.|..+..+++....++++++.++.-++.+++.-... -++....|+.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~---------vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEA---------IIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCE---------EEETTTTTCCSEEETTEECH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcE---------EEecCcCcccccccccccch
Confidence 567789999997 5678888887765557899999999999997753220 0110001110
Q ss_pred --------CCC--CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 223 --------DFT--PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 223 --------~~~--~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.+. .....+|+|+-+-. . ..+..+.++|++||.+++.-
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG-------R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC-------H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC-------c--hhHHHHHHHhhCCcEEEEEe
Confidence 000 11247999976432 2 46777888999999998753
No 368
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.11 E-value=0.18 Score=48.97 Aligned_cols=110 Identities=15% Similarity=0.110 Sum_probs=64.9
Q ss_pred CCccEEEeecCccHHHHHHHHhc----------C---CcEEEEeC---CHHHHHHHHHHcC-----------cCCCC---
Q 023562 157 QHLVALDCGSGIGRITKNLLIRY----------F---NEVDLLEP---VSHFLDAARESLA-----------PENHM--- 206 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~----------~---~~v~~vD~---S~~~l~~A~~~~~-----------~~~~~--- 206 (280)
+..+|+|+|.|+|.......+.. . -+++.+|. +...+..+-.... .....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45699999999998877665532 1 16888998 5555554322211 11000
Q ss_pred -----CCCCCcceeEEEccCCCC-C-CC---CCcEEEEEccch-hhcCChhhH-HHHHHHHHHcCCCCcEEEE
Q 023562 207 -----APDMHKATNFFCVPLQDF-T-PE---TGRYDVIWVQWC-IGHLTDDDF-VSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 207 -----~~~~~~~i~~~~~d~~~~-~-~~---~~~fDlV~~~~~-l~~~~~~d~-~~~l~~~~r~LkpGG~lii 267 (280)
...-...+++..+|+.+. + .. ...||+++.-.. -..-+ +-+ ..++..+.++++|||.+.-
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np-~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNP-DMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CC-TTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCCh-hhhhHHHHHHHHHHhCCCCEEEe
Confidence 001123566777777543 1 11 368999987532 22212 111 5899999999999998753
No 369
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.03 E-value=0.88 Score=40.10 Aligned_cols=93 Identities=8% Similarity=-0.051 Sum_probs=61.2
Q ss_pred CCCC--ccEEEeec--CccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----
Q 023562 155 NNQH--LVALDCGS--GIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (280)
Q Consensus 155 ~~~~--~~VLDlGc--G~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 225 (280)
..++ .+||-.|+ |.|..+..++..... +|++++.++.-++.+++.+... ...|..+..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-------------~~~d~~~~~~~~~ 222 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-------------AAINYKKDNVAEQ 222 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-------------EEEETTTSCHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-------------eEEecCchHHHHH
Confidence 4466 89999997 666777767665444 7999999998888877643210 111222110
Q ss_pred ---CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 ---PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 ---~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
...+.+|+|+.+-. . ..++.+.++|++||.+++.-
T Consensus 223 ~~~~~~~~~d~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 223 LRESCPAGVDVYFDNVG-------G--NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHCTTCEEEEEESCC-------H--HHHHHHHHTEEEEEEEEECC
T ss_pred HHHhcCCCCCEEEECCC-------H--HHHHHHHHHhccCcEEEEEC
Confidence 01126999986643 1 46778889999999998764
No 370
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.90 E-value=0.38 Score=41.94 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=59.3
Q ss_pred CCCCc-cEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCc
Q 023562 155 NNQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGR 230 (280)
Q Consensus 155 ~~~~~-~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~ 230 (280)
..++. +||-.|+ |.|..+..+++....+|++++.+++-++.+++.-.. .-++....+.... ....+.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~~i~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK---------EVLAREDVMAERIRPLDKQR 216 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS---------EEEECC---------CCSCC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc---------EEEecCCcHHHHHHHhcCCc
Confidence 33444 8999997 677888888776444799999998888888763221 0111111110000 111246
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+|+|+-+-. . ..+..+.+.|++||.+++.-
T Consensus 217 ~d~vid~~g-------~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 217 WAAAVDPVG-------G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEEECST-------T--TTHHHHHHTEEEEEEEEECS
T ss_pred ccEEEECCc-------H--HHHHHHHHhhccCCEEEEEe
Confidence 999986533 1 24667788999999998763
No 371
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.78 E-value=0.63 Score=41.58 Aligned_cols=96 Identities=15% Similarity=0.046 Sum_probs=61.4
Q ss_pred CCCCccEEEeecC-ccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc------CC-CCC
Q 023562 155 NNQHLVALDCGSG-IGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP------LQ-DFT 225 (280)
Q Consensus 155 ~~~~~~VLDlGcG-~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d------~~-~~~ 225 (280)
..++.+||-+|+| .|..+..+++... .+|++++.|++-++.+++.-.. .++... +. .+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD------------LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc------------EEEeccccCcchHHHHHH
Confidence 3467799999966 3677777776655 4799999999999988854221 111111 00 000
Q ss_pred --CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 226 --PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 --~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.....+|+|+-+-.- . ..++.+.+.|+|+|.+++.-.
T Consensus 261 ~~~~g~g~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 261 DITHGRGADFILEATGD------S--RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHTTTSCEEEEEECSSC------T--THHHHHHHHEEEEEEEEECCC
T ss_pred HHhCCCCCcEEEECCCC------H--HHHHHHHHHHhcCCEEEEEec
Confidence 111369999865321 1 357778899999999987643
No 372
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=90.67 E-value=3.4 Score=36.35 Aligned_cols=114 Identities=12% Similarity=0.074 Sum_probs=72.6
Q ss_pred CccEEEeecCccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHHHcCcCC--------------CCC---CCCCcceeEEE
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPEN--------------HMA---PDMHKATNFFC 218 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~--~v~~vD~S~~~l~~A~~~~~~~~--------------~~~---~~~~~~i~~~~ 218 (280)
...|+-+|||.=.....+...+.. .+.=||. |..++.=++.+...+ ... .-...+..++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 458999999998887777765322 4666665 344443222222100 000 00124577888
Q ss_pred ccCCCCC----------CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 219 VPLQDFT----------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 219 ~d~~~~~----------~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
+|+.+.. +....--++++-.++.|+++++...+|+.+.+.. |+|.+++.|.+..
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p 233 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNM 233 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCT
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCC
Confidence 8987621 2234456777889999999999999999999877 5566667788753
No 373
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.48 E-value=0.56 Score=41.46 Aligned_cols=89 Identities=20% Similarity=0.108 Sum_probs=56.9
Q ss_pred ccEEEeecCc-cHHH-HHHH-HhcCCc-EEEEeCCHH---HHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC----
Q 023562 159 LVALDCGSGI-GRIT-KNLL-IRYFNE-VDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---- 227 (280)
Q Consensus 159 ~~VLDlGcG~-G~~s-~~l~-~~~~~~-v~~vD~S~~---~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---- 227 (280)
.+||-+|+|. |.++ ..++ +....+ |++++.+++ -++.+++.-.. .. |..+-...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~-------------~v--~~~~~~~~~i~~ 238 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT-------------YV--DSRQTPVEDVPD 238 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE-------------EE--ETTTSCGGGHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc-------------cc--CCCccCHHHHHH
Confidence 7999999753 6666 6666 543334 999999988 88888753211 11 21110000
Q ss_pred -CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 228 -TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 -~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.+.+|+|+-.-.- . ..++.+.+.|+|+|.+++.-.
T Consensus 239 ~~gg~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 239 VYEQMDFIYEATGF------P--KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HSCCEEEEEECSCC------H--HHHHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCEEEECCCC------h--HHHHHHHHHHhcCCEEEEEeC
Confidence 1379999854321 1 367788899999999988643
No 374
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.47 E-value=0.39 Score=42.47 Aligned_cols=95 Identities=20% Similarity=0.141 Sum_probs=62.3
Q ss_pred CCCCccEEEee--cCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----CC
Q 023562 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (280)
Q Consensus 155 ~~~~~~VLDlG--cG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (280)
..++.+||-.| .|.|..+..+++....+|++++.++.-++.+++.-.. ..+...-.++. ..
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK------------RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC------------EEEeCCchHHHHHHHHHh
Confidence 56778999995 4567777777776545799999999999988875322 11111111110 00
Q ss_pred CCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 ~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
...+|+|+.+-.- ..+..+.+.|+++|.+++.-.
T Consensus 233 ~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 233 GQGVDIILDMIGA---------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SSCEEEEEESCCG---------GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEECCCH---------HHHHHHHHHhccCCEEEEEEe
Confidence 2469999865431 256677889999999987643
No 375
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.40 E-value=0.84 Score=38.22 Aligned_cols=104 Identities=16% Similarity=0.212 Sum_probs=66.4
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-------
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (280)
.++++|=.|++.|. ++..|++++. +|.+++.++..++...+.+ ..++.++.+|+.+...
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~ 75 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF----------GPRVHALRSDIADLNEIAVLGAA 75 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh----------CCcceEEEccCCCHHHHHHHHHH
Confidence 34678888876652 4455566666 5999999998887766654 2357888999877531
Q ss_pred ---CCCcEEEEEccchh------hcCChhhHHH-----------HHHHHHHcCCCCcEEEEEecc
Q 023562 227 ---ETGRYDVIWVQWCI------GHLTDDDFVS-----------FFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 ---~~~~fDlV~~~~~l------~~~~~~d~~~-----------~l~~~~r~LkpGG~lii~e~~ 271 (280)
..++.|+++.+-.+ ...+++++.. +.+.+...++++|.|++.-.+
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 140 (255)
T 4eso_A 76 AGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV 140 (255)
T ss_dssp HHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence 01378999876332 2234444333 345566667778888776433
No 376
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.22 E-value=0.46 Score=43.50 Aligned_cols=44 Identities=20% Similarity=0.438 Sum_probs=35.4
Q ss_pred CccEEEeecCccHHHHHHHHhc------CCcEEEEeCCHHHHHHHHHHcC
Q 023562 158 HLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLA 201 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~------~~~v~~vD~S~~~l~~A~~~~~ 201 (280)
+.+|+|+|+|.|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 4689999999999988887531 2379999999998887777664
No 377
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.18 E-value=2 Score=37.45 Aligned_cols=97 Identities=14% Similarity=0.030 Sum_probs=60.6
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-.|+|. |.++..+++. +...++++|.+++-++.+++.-... .+...-.+.. .
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~------------~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQ------------TFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE------------EEETTTSCHHHHHHHHG
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeE------------EEeCCCCCHHHHHHhhc
Confidence 45678999999875 4455555555 4456789999999999998753321 1111101100 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
....+|+|+..-.- ...++.+.++|++||.+++.-..
T Consensus 226 ~~~g~d~v~d~~G~--------~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 226 ELRFNQLILETAGV--------PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp GGCSSEEEEECSCS--------HHHHHHHHHHCCTTCEEEECCCC
T ss_pred ccCCcccccccccc--------cchhhhhhheecCCeEEEEEecc
Confidence 12357887654321 15677888999999999886443
No 378
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.84 E-value=0.12 Score=44.71 Aligned_cols=93 Identities=12% Similarity=-0.064 Sum_probs=59.5
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccC-CCCCCCCCcE
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~f 231 (280)
..++.+||-.|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..+...- .++...-..+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~~~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE------------EAATYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS------------EEEEGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC------------EEEECCcchhHHHHhcCc
Confidence 346789999997 567777777766444799999999988888653211 1111110 0110000469
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|+. -. . ..++.+.+.|+++|.+++.-
T Consensus 191 d~vid-~g-------~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 191 DLVLE-VR-------G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEE-CS-------C--TTHHHHHTTEEEEEEEEEC-
T ss_pred eEEEE-CC-------H--HHHHHHHHhhccCCEEEEEe
Confidence 99986 32 1 25677889999999988753
No 379
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.76 E-value=2.3 Score=33.32 Aligned_cols=92 Identities=15% Similarity=-0.017 Sum_probs=53.2
Q ss_pred CccEEEeecCc-cHH-HHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----C-CCC
Q 023562 158 HLVALDCGSGI-GRI-TKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----P-ETG 229 (280)
Q Consensus 158 ~~~VLDlGcG~-G~~-s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~-~~~ 229 (280)
+.+|+=+|||. |.. +..|.+. +. .|+++|.++..++.+++. .+.++.+|..+.. . .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~-------------g~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE-------------GRNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT-------------TCCEEECCTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC-------------CCCEEEcCCCCHHHHHhccCCC
Confidence 45899998864 322 2333344 55 599999999888776542 1334555554321 1 124
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+|+|+.... ++.....+-...+.+.|++.++..
T Consensus 105 ~ad~vi~~~~-----~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 105 HVKLVLLAMP-----HHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CCCEEEECCS-----SHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEeCC-----ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 6888887432 122223333456667778877764
No 380
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.67 E-value=1.9 Score=38.58 Aligned_cols=112 Identities=12% Similarity=0.051 Sum_probs=71.2
Q ss_pred chHHHHHHHHhccCCCccCCCCccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeE
Q 023562 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF 216 (280)
Q Consensus 137 ~~~~~l~~~l~~~l~~~~~~~~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~ 216 (280)
...++|.+.+... ..+.+||.++.+.|.++..++.. .++.+.-|--.....+.|+..+++. ...+++
T Consensus 24 a~d~~ll~~~~~~------~~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~----~~~~~~ 90 (375)
T 4dcm_A 24 AADEYLLQQLDDT------EIRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGID----ESSVKF 90 (375)
T ss_dssp HHHHHHHHTTTTC------CCCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCC----GGGSEE
T ss_pred hHHHHHHHhhhhc------cCCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCC----ccceEe
Confidence 3345655554432 13468999999999999988644 3455544655555666777665441 123444
Q ss_pred EEccCCCCCCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 217 FCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 217 ~~~d~~~~~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
... +++. ...||+|+....- + ...+...+..+...|+||+.+++.
T Consensus 91 ~~~-~~~~---~~~~~~v~~~lpk-~--~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 91 LDS-TADY---PQQPGVVLIKVPK-T--LALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp EET-TSCC---CSSCSEEEEECCS-C--HHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred ccc-cccc---ccCCCEEEEEcCC-C--HHHHHHHHHHHHhhCCCCCEEEEE
Confidence 432 2222 3689998875431 1 246778999999999999999876
No 381
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=89.67 E-value=0.32 Score=43.09 Aligned_cols=96 Identities=18% Similarity=0.036 Sum_probs=60.1
Q ss_pred CCCCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCC-CCC--CCCCc
Q 023562 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DFT--PETGR 230 (280)
Q Consensus 155 ~~~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~-~~~--~~~~~ 230 (280)
..++.+||-+|+|. |..+..+++....+|++++.|+.-++.+++.-.. .++...-. ++. .. +.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD------------HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEEGGGTSCHHHHSC-SC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCC------------EEEcCcCchHHHHHhh-cC
Confidence 55778999999854 6777777765444699999999999988874321 11111101 110 11 47
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+|+|+..-.-. + ...++.+.++|++||.+++.-
T Consensus 244 ~D~vid~~g~~--~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL--T----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS--T----TCCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC--c----HHHHHHHHHHhcCCCEEEEec
Confidence 99998653320 0 023455678999999998753
No 382
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.32 E-value=0.46 Score=41.42 Aligned_cols=96 Identities=13% Similarity=0.014 Sum_probs=60.0
Q ss_pred CCCc-cEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CCCCCcE
Q 023562 156 NQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRY 231 (280)
Q Consensus 156 ~~~~-~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~f 231 (280)
.++. +||-.|+ |.|..+..+++....+|++++.+++-++.+++.-.. .-++....+.... ....+.+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~v~~~~~~~~~~~~~~~~~~~ 218 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS---------EVISREDVYDGTLKALSKQQW 218 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS---------EEEEHHHHCSSCCCSSCCCCE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------EEEECCCchHHHHHHhhcCCc
Confidence 3444 8999997 667777777765444699999998888888764221 1111111111111 1122469
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|+-+-. . ..+..+.+.|++||.+++.-
T Consensus 219 d~vid~~g-------~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 219 QGAVDPVG-------G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEESCC-------T--HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCc-------H--HHHHHHHHhhcCCCEEEEEe
Confidence 99876533 1 35778889999999998753
No 383
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=88.71 E-value=0.95 Score=40.08 Aligned_cols=89 Identities=19% Similarity=0.096 Sum_probs=56.2
Q ss_pred CccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCH---HHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CCC----CC
Q 023562 158 HLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP----ET 228 (280)
Q Consensus 158 ~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~---~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~----~~ 228 (280)
+.+||-+|+|. |..+..+++....+|++++.++ +-++.+++.-. +.. | .+ +.. ..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga-------------~~v--~-~~~~~~~~~~~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKT-------------NYY--N-SSNGYDKLKDSV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTC-------------EEE--E-CTTCSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCC-------------cee--c-hHHHHHHHHHhC
Confidence 78999999842 4555555554333799999988 77787765421 111 2 22 110 01
Q ss_pred CcEEEEEccchhhcCChhhHHHHH-HHHHHcCCCCcEEEEEec
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFF-KRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l-~~~~r~LkpGG~lii~e~ 270 (280)
+.+|+|+.+-... ..+ +.+.+.|+++|.+++.-.
T Consensus 245 ~~~d~vid~~g~~--------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATGAD--------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCCCC--------THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCCCh--------HHHHHHHHHHHhcCCEEEEEec
Confidence 4699998654311 245 788899999999987643
No 384
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.70 E-value=1.1 Score=37.90 Aligned_cols=104 Identities=20% Similarity=0.155 Sum_probs=64.4
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCC------------HHHHHHHHHHcCcCCCCCCCCCcceeEEEccC
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S------------~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~ 221 (280)
.+++||=-|++.| .++..|++++. +|.++|.+ ...++.+...+... ..++.++.+|+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------GRKAYTAEVDV 80 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------TSCEEEEECCT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhc-------CCceEEEEccC
Confidence 3457888887665 24555666666 59999987 66666655544332 34688889998
Q ss_pred CCCCC-----C-----CCcEEEEEccchhhc----CChhhHHH-----------HHHHHHHcCCCCcEEEEE
Q 023562 222 QDFTP-----E-----TGRYDVIWVQWCIGH----LTDDDFVS-----------FFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 222 ~~~~~-----~-----~~~fDlV~~~~~l~~----~~~~d~~~-----------~l~~~~r~LkpGG~lii~ 268 (280)
.+... . .++.|+++.+-.+.. .+.+++.. +++.+...|+.+|.|++.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 77420 0 136899987643322 33344333 345666777888888765
No 385
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.61 E-value=1.4 Score=36.89 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=66.8
Q ss_pred CCccEEEeecC----ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----
Q 023562 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (280)
Q Consensus 157 ~~~~VLDlGcG----~G~-~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (280)
.+.++|=.|++ .|. ++..|++++. +|.+++.++...+.+.+.....+ ..++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLD------RNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSS------SCCCEEEECCCSSSHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcC------CCCceEEeCCCCCHHHHHHHH
Confidence 34678888876 332 5566666676 59999988766665555443321 1268889999987531
Q ss_pred C-----CCcEEEEEccchhh----------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEecc
Q 023562 227 E-----TGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 ~-----~~~fDlV~~~~~l~----------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e~~ 271 (280)
. .+++|+++.+-.+. ..+.+++. .+++.+...++++|.|++.-.+
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 0 13689888663322 23333333 2556777788888988876443
No 386
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.54 E-value=2.9 Score=36.43 Aligned_cols=97 Identities=18% Similarity=-0.006 Sum_probs=60.2
Q ss_pred CCCCccEEEeecCcc-HHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CC--CCCC
Q 023562 155 NNQHLVALDCGSGIG-RITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETG 229 (280)
Q Consensus 155 ~~~~~~VLDlGcG~G-~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~--~~~~ 229 (280)
..++.+||=+|+|.+ ..+..+++. +..+|+++|.+++-++.+++.-... -+++...|..+ .. ....
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~---------~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADV---------TINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSE---------EEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeE---------EEeCCCCCHHHHhhhhcCCC
Confidence 456789999999875 444444543 4558999999999888888764431 12222212111 00 1123
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+|.++....- ...+....+.|+++|.+++.
T Consensus 232 g~d~~~~~~~~--------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCAVA--------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECCSC--------HHHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEeccC--------cchhheeheeecCCceEEEE
Confidence 56766654321 15678888999999998875
No 387
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.35 E-value=4.4 Score=29.66 Aligned_cols=89 Identities=8% Similarity=0.005 Sum_probs=50.5
Q ss_pred CccEEEeecCccHHHHHH----HHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCC
Q 023562 158 HLVALDCGSGIGRITKNL----LIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l----~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 229 (280)
..+|+=+|+| .++..+ .+.+. .|+++|.++..++..++.. .+.++.+|..+.. ....
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~------------~~~~~~~d~~~~~~l~~~~~~ 68 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI------------DALVINGDCTKIKTLEDAGIE 68 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------------SSEEEESCTTSHHHHHHTTTT
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc------------CcEEEEcCCCCHHHHHHcCcc
Confidence 3578888875 444443 33344 6999999998877665432 1334555544321 1124
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
.+|+|+..-. ++.....+..+.+.+.++-+++
T Consensus 69 ~~d~vi~~~~-----~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 69 DADMYIAVTG-----KEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp TCSEEEECCS-----CHHHHHHHHHHHHHTTCCCEEE
T ss_pred cCCEEEEeeC-----CchHHHHHHHHHHHcCCCEEEE
Confidence 6888887632 2233345556666688764443
No 388
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.35 E-value=0.96 Score=35.38 Aligned_cols=108 Identities=16% Similarity=0.181 Sum_probs=63.8
Q ss_pred CCccEEEeecCccHHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCC-----CCc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-----TGR 230 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-----~~~ 230 (280)
-.+-|||+|-|+|+.--.|.+..+. .|..+|-.- .. .....+..-+++.+|+.+.-+. ..+
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~----------~~---hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~ 106 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAV----------AS---HPDSTPPEAQLILGDIRETLPATLERFGAT 106 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSC----------CC---CGGGCCCGGGEEESCHHHHHHHHHHHHCSC
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeee----------cc---CCCCCCchHheecccHHHHHHHHHHhcCCc
Confidence 4467999999999999999888776 898888410 00 0111234456777776553100 234
Q ss_pred EEEEEccchhhcCChhh-HHH-HHHHHHHcCCCCcEEEEEeccCCCCCC
Q 023562 231 YDVIWVQWCIGHLTDDD-FVS-FFKRAKVGLKPGGFFVLKENIARSGSE 277 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d-~~~-~l~~~~r~LkpGG~lii~e~~~~~~~~ 277 (280)
.-++..-...++-..++ ... +=--+..+|.|||+++-...+-..++.
T Consensus 107 a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~~~~l~ 155 (174)
T 3iht_A 107 ASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMYFEGLE 155 (174)
T ss_dssp EEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCCCSSCE
T ss_pred eEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccCCCCcc
Confidence 55555544433321111 112 223456889999999887777555543
No 389
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=87.85 E-value=0.47 Score=48.04 Aligned_cols=47 Identities=19% Similarity=0.085 Sum_probs=41.1
Q ss_pred CCCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCc
Q 023562 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 156 ~~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~ 202 (280)
....+++|+-||.|.++..|.+.|+ ..+.++|+++.+++.-+.|+..
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~ 585 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG 585 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC
Confidence 3456899999999999999988887 5788999999999998888754
No 390
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=87.37 E-value=1.6 Score=45.52 Aligned_cols=46 Identities=20% Similarity=0.099 Sum_probs=40.1
Q ss_pred CCccEEEeecCccHHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCc
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~ 202 (280)
...+++|+-||.|.++..|.+.|+ ..+.++|+++.+++.-+.++..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~ 896 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPG 896 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC
Confidence 456899999999999999988886 5688999999999998888754
No 391
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.35 E-value=3 Score=36.26 Aligned_cols=88 Identities=13% Similarity=-0.008 Sum_probs=56.6
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CCCCCCcEEEE
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDVI 234 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fDlV 234 (280)
.+|.=||+|.= .++..+.+.++. .|+++|.++..++.+++.-. +.-...++.+ .. ...|+|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~------------~~~~~~~~~~~~~---~~aDvV 98 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI------------IDEGTTSIAKVED---FSPDFV 98 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS------------CSEEESCTTGGGG---GCCSEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC------------cchhcCCHHHHhh---ccCCEE
Confidence 57999998752 344555555653 69999999998888765311 1112233332 11 357888
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
+.+- ++.....+++++...++||.+++
T Consensus 99 ilav-----p~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 99 MLSS-----PVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp EECS-----CGGGHHHHHHHHHHHSCTTCEEE
T ss_pred EEeC-----CHHHHHHHHHHHhhccCCCcEEE
Confidence 8653 33456688899999999987654
No 392
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.12 E-value=2.5 Score=38.32 Aligned_cols=90 Identities=9% Similarity=0.018 Sum_probs=59.6
Q ss_pred CccEEEeecCccHHHHHHH----HhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCC
Q 023562 158 HLVALDCGSGIGRITKNLL----IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~----~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 229 (280)
..+|+=+|+|. ++..++ +.+. .|+++|.++..++.+++. .+.++.+|..+.. ..-.
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~-------------g~~vi~GDat~~~~L~~agi~ 67 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF-------------GMKVFYGDATRMDLLESAGAA 67 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT-------------TCCCEESCTTCHHHHHHTTTT
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC-------------CCeEEEcCCCCHHHHHhcCCC
Confidence 35788888865 443333 3344 599999999999988753 1445778877642 2224
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
..|+|++... +++....+-...+.+.|...++..
T Consensus 68 ~A~~viv~~~-----~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 68 KAEVLINAID-----DPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp TCSEEEECCS-----SHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ccCEEEECCC-----ChHHHHHHHHHHHHhCCCCeEEEE
Confidence 6888876543 334456667777888898877764
No 393
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.85 E-value=3.8 Score=30.43 Aligned_cols=87 Identities=10% Similarity=0.048 Sum_probs=51.3
Q ss_pred ccEEEeecCccHHHHHH----HHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCc
Q 023562 159 LVALDCGSGIGRITKNL----LIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l----~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (280)
.+|+=+|||. ++..+ .+.+. .|+++|.+++.++.+++. ...++.+|..+.. .....
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-------------~~~~~~gd~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-------------GFDAVIADPTDESFYRSLDLEG 70 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------------TCEEEECCTTCHHHHHHSCCTT
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-------------CCcEEECCCCCHHHHHhCCccc
Confidence 5799999854 44433 33455 599999999988877653 1456777776532 11246
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
+|+|+.... +++....+....+.+. ...++.
T Consensus 71 ~d~vi~~~~-----~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 71 VSAVLITGS-----DDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CSEEEECCS-----CHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CCEEEEecC-----CHHHHHHHHHHHHHhC-CceEEE
Confidence 888876533 1233334444444455 444444
No 394
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=86.81 E-value=1.2 Score=39.06 Aligned_cols=91 Identities=13% Similarity=0.074 Sum_probs=61.1
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
..++.+||-+|+ |.|..+..+++....+|+++ .++.-++.+++.-.. .+. +-.++. .
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~-------------~i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGAT-------------PID-ASREPEDYAAEHT 212 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSE-------------EEE-TTSCHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCC-------------Eec-cCCCHHHHHHHHh
Confidence 567789999994 56788887877655579999 889888888765321 111 111111 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
....+|+|+-+-. . ..+..+.+.|+++|.+++.-
T Consensus 213 ~~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 213 AGQGFDLVYDTLG-------G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp TTSCEEEEEESSC-------T--HHHHHHHHHEEEEEEEEESC
T ss_pred cCCCceEEEECCC-------c--HHHHHHHHHHhcCCeEEEEc
Confidence 1246999986433 1 36777888999999998753
No 395
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=86.66 E-value=1.2 Score=40.51 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=62.2
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-------
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (280)
..++.+||-.|+ |.|..+..+++....++++++.++.-++.+++.-.. ..++....++.+..
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~~i~~~~~~~~~~~~~~~~~~ 288 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCD---------LVINRAELGITDDIADDPRRV 288 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---------CEEEHHHHTCCTTGGGCHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC---------EEEeccccccccccccccccc
Confidence 567789999996 567777777776555799999999999988764221 11111111221110
Q ss_pred -------------CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 -------------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 -------------~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
.....+|+|+-+-. . ..++.+.+.|++||.+++.-
T Consensus 289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 289 VETGRKLAKLVVEKAGREPDIVFEHTG-------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHSSCCSEEEECSC-------H--HHHHHHHHHSCTTCEEEESC
T ss_pred chhhhHHHHHHHHHhCCCceEEEECCC-------c--hHHHHHHHHHhcCCEEEEEe
Confidence 00246899876533 1 35677788999999998864
No 396
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.60 E-value=2.2 Score=37.36 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=59.3
Q ss_pred CCccEEEee-c-CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----CCCC
Q 023562 157 QHLVALDCG-S-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PETG 229 (280)
Q Consensus 157 ~~~~VLDlG-c-G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 229 (280)
++.+||-.| + |.|..+..+++....+|++++.++.-++.+++.-... ++..+ .++. ....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~------------vi~~~-~~~~~~~~~~~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADI------------VLNHK-ESLLNQFKTQGIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSE------------EECTT-SCHHHHHHHHTCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE------------EEECC-ccHHHHHHHhCCC
Confidence 677899884 3 4577777777654447999999999999998753221 11110 0110 1124
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+|+|+-+-. -...++.+.++|+++|.++..
T Consensus 217 g~Dvv~d~~g--------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 217 LVDYVFCTFN--------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CEEEEEESSC--------HHHHHHHHHHHEEEEEEEEES
T ss_pred CccEEEECCC--------chHHHHHHHHHhccCCEEEEE
Confidence 7999986432 124678888999999999764
No 397
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.54 E-value=3.9 Score=34.15 Aligned_cols=92 Identities=9% Similarity=-0.030 Sum_probs=57.3
Q ss_pred ccEEEeecCccHHHHHHHHh----cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 159 LVALDCGSGIGRITKNLLIR----YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~~----~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
++||=.|| |.++..+++. ++ +|++++-++.-.+.... .+++++.+|+.++. ...+|+|
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~d~~--~~~~d~v 67 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-------------SGAEPLLWPGEEPS--LDGVTHL 67 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-------------TTEEEEESSSSCCC--CTTCCEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-------------CCCeEEEecccccc--cCCCCEE
Confidence 58999994 8887777654 34 69999988765543322 24788899998866 3578999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+..-......++....+++.+.+.-..-+.|++.
T Consensus 68 i~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 68 LISTAPDSGGDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp EECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred EECCCccccccHHHHHHHHHHHhhcCCceEEEEe
Confidence 8765433322223345555555431222455543
No 398
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=86.04 E-value=2.4 Score=36.68 Aligned_cols=92 Identities=15% Similarity=-0.017 Sum_probs=57.7
Q ss_pred CCCCccEEEee--cCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCC-CCCCCCcE
Q 023562 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRY 231 (280)
Q Consensus 155 ~~~~~~VLDlG--cG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~f 231 (280)
..++.+||-+| .|.|..+..+++....+|++++ ++.-++.+++.-.. ..+...-.+ +...-..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~------------~~i~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAE------------QCINYHEEDFLLAISTPV 216 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCS------------EEEETTTSCHHHHCCSCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCC------------EEEeCCCcchhhhhccCC
Confidence 56778999996 4568888888876555788887 55557777764322 112111111 11111469
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|+|+-+-. . ..+..+.++|+++|.++..
T Consensus 217 D~v~d~~g-------~--~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVG-------G--DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSC-------H--HHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCC-------c--HHHHHHHHhccCCCEEEEe
Confidence 99986432 1 2237788999999999875
No 399
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=85.48 E-value=2.8 Score=35.74 Aligned_cols=106 Identities=15% Similarity=0.061 Sum_probs=65.0
Q ss_pred CCccEEEeecC----cc-HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----
Q 023562 157 QHLVALDCGSG----IG-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (280)
Q Consensus 157 ~~~~VLDlGcG----~G-~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (280)
.++++|=.|++ .| .++..|++++. +|.+++.++...+.+++.... ..++.++.+|+.+...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEE--------LGAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHH--------HTCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHh--------cCCceEEECCCCCHHHHHHHH
Confidence 35678999976 33 34556666676 499999987665555544333 1246788889877420
Q ss_pred -----CCCcEEEEEccchhh----------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEecc
Q 023562 227 -----ETGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 -----~~~~fDlV~~~~~l~----------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e~~ 271 (280)
..++.|+++.+-.+. ..+++++. .+++.+...++.+|.|++.-.+
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 014789998763322 23333332 3455666777888988876443
No 400
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=85.21 E-value=0.5 Score=42.00 Aligned_cols=91 Identities=15% Similarity=0.094 Sum_probs=56.2
Q ss_pred CCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc-c---CCCCCCCCCcE
Q 023562 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-P---LQDFTPETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~-d---~~~~~~~~~~f 231 (280)
++.+||-+|+|. |..+..+++....+|++++.++.-++.+++.+... .++.. + +.+. . +.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~-----------~v~~~~~~~~~~~~--~-~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-----------SFLVSRDQEQMQAA--A-GTL 252 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS-----------EEEETTCHHHHHHT--T-TCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc-----------eEEeccCHHHHHHh--h-CCC
Confidence 677899999753 55666666554447999999998888877444321 11111 0 1111 1 369
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
|+|+.+-... ..++.+.+.|+++|.++..-
T Consensus 253 D~vid~~g~~--------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 253 DGIIDTVSAV--------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEECCSSC--------CCSHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCcH--------HHHHHHHHHHhcCCEEEEEc
Confidence 9998653311 12445667889999988753
No 401
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.17 E-value=0.38 Score=42.60 Aligned_cols=94 Identities=13% Similarity=0.037 Sum_probs=56.4
Q ss_pred CCccEEEeecCc-cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEc-cCCCCCCCCCcEEEE
Q 023562 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~-G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~fDlV 234 (280)
++.+||-+|+|. |..+..+++....+|++++.+++-++.+++.+... .-++.... .+.+. . +.+|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~--------~vi~~~~~~~~~~~--~-~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGAD--------DYVIGSDQAKMSEL--A-DSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCS--------CEEETTCHHHHHHS--T-TTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCc--------eeeccccHHHHHHh--c-CCCCEE
Confidence 678999999763 55666666553347999999998888877443321 00100000 01111 1 369999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+-.-.-. ..++.+.++|+|||.+++.-
T Consensus 249 id~~g~~--------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVH--------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSC--------CCSHHHHTTEEEEEEEEECS
T ss_pred EECCCCh--------HHHHHHHHHhccCCEEEEeC
Confidence 8653211 13455678999999998764
No 402
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.94 E-value=0.48 Score=41.57 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=39.3
Q ss_pred cceeEEEccCCC-CC-CCCCcEEEEEccchhhcCC------------hhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 212 KATNFFCVPLQD-FT-PETGRYDVIWVQWCIGHLT------------DDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 212 ~~i~~~~~d~~~-~~-~~~~~fDlV~~~~~l~~~~------------~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
....++++|..+ +. .++++||+|++.--..... ...+..+++.+.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 356788888654 22 4457999999873321110 014678899999999999999885
No 403
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=84.78 E-value=2.2 Score=35.54 Aligned_cols=106 Identities=17% Similarity=-0.010 Sum_probs=63.4
Q ss_pred CCCccEEEeecC--cc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC----
Q 023562 156 NQHLVALDCGSG--IG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---- 226 (280)
Q Consensus 156 ~~~~~VLDlGcG--~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---- 226 (280)
.++++||=.|++ .| .++..|++++. +|.+++.+....+.+++..... ..+.++.+|+.+...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~ 82 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEF--------GSELVFPCDVADDAQIDAL 82 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHT--------TCCCEEECCTTCHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHc--------CCcEEEECCCCCHHHHHHH
Confidence 356789999965 33 23455555666 5999988866555554443331 236788899877420
Q ss_pred ------CCCcEEEEEccchhhc-----------CChhhHHH-----------HHHHHHHcCCCCcEEEEEec
Q 023562 227 ------ETGRYDVIWVQWCIGH-----------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 227 ------~~~~fDlV~~~~~l~~-----------~~~~d~~~-----------~l~~~~r~LkpGG~lii~e~ 270 (280)
..++.|+++.+-.+.. .+.+++.. +++.+...++++|.|++.-.
T Consensus 83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 83 FASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 0147899997643321 33344332 34556666777888777543
No 404
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=84.23 E-value=1.2 Score=39.48 Aligned_cols=94 Identities=13% Similarity=0.058 Sum_probs=56.2
Q ss_pred CCCCccEEEee--cCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC---CCCC
Q 023562 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (280)
Q Consensus 155 ~~~~~~VLDlG--cG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~ 229 (280)
..++.+||-.| .|.|..+..+++....+|++++ ++.-++.+++.-.. ..+..+-.++. ....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGAD------------DVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS------------EEEETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCC------------EEEECCchHHHHHHhhcC
Confidence 34678999998 4567777777766444798888 77777777543211 11111101110 0113
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+|+|+-+-.- +. ..+....++|++||.+++.
T Consensus 248 g~D~vid~~g~-----~~--~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 248 PFDFILDNVGG-----ST--ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CBSEEEESSCT-----TH--HHHGGGGBCSSSCCEEEES
T ss_pred CCCEEEECCCC-----hh--hhhHHHHHhhcCCcEEEEe
Confidence 68998755321 11 2456677899999999875
No 405
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=84.20 E-value=2.3 Score=35.45 Aligned_cols=105 Identities=11% Similarity=-0.017 Sum_probs=62.4
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEE-eCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~v-D~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~ 227 (280)
.++++|=.|++.|. ++..|++++. +|.++ +.++...+...+.+... ..++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKL-------GRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTT-------TSCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc-------CCceEEEEcCCCCHHHHHHHHH
Confidence 34678888877662 4555666666 48777 66666666655544332 3457888999887430 0
Q ss_pred -----CCcEEEEEccchh-------hcCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 023562 228 -----TGRYDVIWVQWCI-------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 228 -----~~~fDlV~~~~~l-------~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (280)
-++.|+++.+-.. ...+++++. .+.+.+...++++|.|++.-
T Consensus 79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 79 AAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 1378999876322 123333332 23445566666778777653
No 406
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.59 E-value=5.5 Score=33.18 Aligned_cols=90 Identities=13% Similarity=0.189 Sum_probs=55.5
Q ss_pred CccEEEeecCc-cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 158 ~~~VLDlGcG~-G~-~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
..+|.=+|||. |. ++..+.+.++..|.++|.+++.++.+.+... +.. ..+..+.. ...|+|+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g------------~~~-~~~~~~~~---~~~Dvvi 73 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE------------AEY-TTDLAEVN---PYAKLYI 73 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT------------CEE-ESCGGGSC---SCCSEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC------------Cce-eCCHHHHh---cCCCEEE
Confidence 35799999974 32 3344455555448999999988877665432 111 22332221 3578887
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
..-. +.....+++.+...+++|..++-.
T Consensus 74 ~av~-----~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 74 VSLK-----DSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp ECCC-----HHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred EecC-----HHHHHHHHHHHHhhcCCCcEEEEC
Confidence 7533 334567888888888888766544
No 407
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=83.58 E-value=1.6 Score=36.92 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=66.9
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--------
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------- 225 (280)
+++.+|--|++.|. ++..|++.+. +|..+|.+++.++.+.+.+... +.++.++.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~-------g~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRK-------GYDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHT-------TCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEeeCCCHHHHHHHHHH
Confidence 35577777777663 4556666676 5999999999888776666543 345778888887642
Q ss_pred --CCCCcEEEEEccch------hhcCChhhHHHHH-----------HHHHHcC---CCCcEEEEEecc
Q 023562 226 --PETGRYDVIWVQWC------IGHLTDDDFVSFF-----------KRAKVGL---KPGGFFVLKENI 271 (280)
Q Consensus 226 --~~~~~fDlV~~~~~------l~~~~~~d~~~~l-----------~~~~r~L---kpGG~lii~e~~ 271 (280)
..-++.|+++.+-. +..+++++++..+ +.+...| +.+|.|+..--+
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~ 147 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL 147 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence 11257899987632 3344545544332 3444444 256877765433
No 408
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=83.09 E-value=3.5 Score=35.06 Aligned_cols=105 Identities=12% Similarity=0.095 Sum_probs=63.0
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHH-HHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC------
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~-~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (280)
++++||=.|++.| .++..|++++. +|.+++.++. ..+...+..... ..++.++.+|+.+...
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKE-------GVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTT-------TCCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHH
Confidence 3467888887665 24455566666 5999987754 344444433322 3468888999877420
Q ss_pred ----CCCcEEEEEccch-------hhcCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 023562 227 ----ETGRYDVIWVQWC-------IGHLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ----~~~~fDlV~~~~~-------l~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (280)
..++.|+++.+-. +..++.+++. .+++.+...++.+|.|++.-
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 0136899986632 2223434433 34556677788889887653
No 409
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=82.49 E-value=4.6 Score=35.67 Aligned_cols=93 Identities=13% Similarity=0.026 Sum_probs=58.9
Q ss_pred CCCccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----CCC
Q 023562 156 NQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PET 228 (280)
Q Consensus 156 ~~~~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~ 228 (280)
.++.+||=+|+ |.|..+..+++....+|+++. |+.-++.+++.-.. .++...-.++. ..+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAE------------EVFDYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS------------EEEETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCc------------EEEECCCchHHHHHHHHcc
Confidence 56789999998 378888888876555688775 88888888764321 11211111110 112
Q ss_pred CcEEEEEccchhhcCChhhHHHHHHHHHHcC-CCCcEEEEEe
Q 023562 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGL-KPGGFFVLKE 269 (280)
Q Consensus 229 ~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~L-kpGG~lii~e 269 (280)
+.+|+|+-+-.- . ..+..+.+.| ++||.+++.-
T Consensus 230 g~~d~v~d~~g~------~--~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 230 NNLRYALDCITN------V--ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp TCCCEEEESSCS------H--HHHHHHHHHSCTTCEEEEESS
T ss_pred CCccEEEECCCc------h--HHHHHHHHHhhcCCCEEEEEe
Confidence 458998854321 1 4567777888 6999998753
No 410
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=80.96 E-value=1.4 Score=36.61 Aligned_cols=102 Identities=22% Similarity=0.101 Sum_probs=59.2
Q ss_pred CccEEEeecCccHHHH----HHHH-hcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C
Q 023562 158 HLVALDCGSGIGRITK----NLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E 227 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~----~l~~-~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~ 227 (280)
+.+||=.|+. |.++. .|++ ++. +|.+++.++..++...+.+... ..++.++.+|+.+... .
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAE-------GLSPRFHQLDIDDLQSIRALRD 74 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhc-------CCeeEEEECCCCCHHHHHHHHH
Confidence 4567777754 44444 4444 455 6999999887766655554332 2357888899876420 0
Q ss_pred -----CCcEEEEEccchhhcC-----C-hhhHH-----------HHHHHHHHcCCCCcEEEEE
Q 023562 228 -----TGRYDVIWVQWCIGHL-----T-DDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 228 -----~~~fDlV~~~~~l~~~-----~-~~d~~-----------~~l~~~~r~LkpGG~lii~ 268 (280)
.+++|+|+.+-..... + .+++. .+++.+...++++|.|++.
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 1278999866332211 1 12222 3445566666777887775
No 411
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=80.03 E-value=5.3 Score=33.99 Aligned_cols=102 Identities=22% Similarity=0.252 Sum_probs=66.0
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--------
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------- 225 (280)
+++.+|--|++.|. ++..|++.+. +|..+|.+++.++.+.+.+. .++.++.+|+.+..
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g----------~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIG----------GGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----------TTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC----------CCeEEEEecCCCHHHHHHHHHH
Confidence 34577877877763 4566666677 59999999998887766553 34667888887642
Q ss_pred --CCCCcEEEEEccch------hhcCChhhHHHH-----------HHHHHHcCCCCcEEEEEe
Q 023562 226 --PETGRYDVIWVQWC------IGHLTDDDFVSF-----------FKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 --~~~~~fDlV~~~~~------l~~~~~~d~~~~-----------l~~~~r~LkpGG~lii~e 269 (280)
..-++.|+++.+-. +.-+++++++.. .+.+...|+.+|.|+..-
T Consensus 97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 01257999987632 333444444333 345556677888776653
No 412
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=79.82 E-value=11 Score=31.17 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=55.8
Q ss_pred CccEEEeecC----ccH-HHHHHHHhcCCcEEEEeCCH---HHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----
Q 023562 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (280)
Q Consensus 158 ~~~VLDlGcG----~G~-~s~~l~~~~~~~v~~vD~S~---~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 225 (280)
++++|=.|++ .|. ++..|++++. +|.+++.++ ..++...+.. ....++.+|+.+..
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~-----------~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQL-----------GSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHT-----------TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhc-----------CCcEEEEccCCCHHHHHH
Confidence 4578888875 232 3444555565 599998876 3333222221 12367788887642
Q ss_pred ------CCCCcEEEEEccchhhc-----------CChhhHHH-----------HHHHHHHcCCCCcEEEEEec
Q 023562 226 ------PETGRYDVIWVQWCIGH-----------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 226 ------~~~~~fDlV~~~~~l~~-----------~~~~d~~~-----------~l~~~~r~LkpGG~lii~e~ 270 (280)
...++.|+++.+-.+.. .+.+++.. +++.+...++++|.|++.-.
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 149 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY 149 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcc
Confidence 11247899987743322 34444333 33455566666787777543
No 413
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=79.44 E-value=3.3 Score=31.52 Aligned_cols=94 Identities=10% Similarity=-0.006 Sum_probs=51.1
Q ss_pred CCccEEEeecCc-cHHH-HHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCc
Q 023562 157 QHLVALDCGSGI-GRIT-KNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (280)
Q Consensus 157 ~~~~VLDlGcG~-G~~s-~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (280)
.+.+|+=+|||. |... ..|.+.+. .|+++|.++.-++.++. . ....++.+|..+.. .....
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~---------~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---E---------FSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---T---------CCSEEEESCTTSHHHHHTTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---c---------CCCcEEEecCCCHHHHHHcCccc
Confidence 456899999865 3222 22333344 69999998876543321 1 12334555543311 11246
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+|+|+..-. ++.....+..+.+.+.|...++..
T Consensus 85 ad~Vi~~~~-----~~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 85 ADMVFAFTN-----DDSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp CSEEEECSS-----CHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCEEEEEeC-----CcHHHHHHHHHHHHHCCCCeEEEE
Confidence 888887533 223344555566666666666654
No 414
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=78.89 E-value=5.7 Score=33.35 Aligned_cols=105 Identities=19% Similarity=0.116 Sum_probs=62.3
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeC-CHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC------
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~-S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (280)
.++++|=.|++.|. ++..|++++. +|.+++. +...++...+.+... +.++.++.+|+.+...
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQA-------GGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHH
Confidence 45678888887662 4555666666 4888754 445555544444322 3457888899876420
Q ss_pred ----CCCcEEEEEccchh------hcCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 023562 227 ----ETGRYDVIWVQWCI------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ----~~~~fDlV~~~~~l------~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (280)
..++.|+++.+-.+ ...+.+++. .+++.+...|+++|.|++.-
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 01368999876332 223333333 34566677788888877763
No 415
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=78.87 E-value=4 Score=34.73 Aligned_cols=107 Identities=15% Similarity=0.063 Sum_probs=62.9
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCC--HHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPV--SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S--~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (280)
+++++|=.|++.| .++..|++++. +|.+++.+ ....+...+..... +.++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~ 119 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEEC-------GRKAVLLPGDLSDESFARSLV 119 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHT-------TCCEEECCCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHc-------CCcEEEEEecCCCHHHHHHHH
Confidence 3457888887655 24455565666 48888876 33444444433322 3457788888876420
Q ss_pred -----CCCcEEEEEccchh-------hcCChhhHH-----------HHHHHHHHcCCCCcEEEEEecc
Q 023562 227 -----ETGRYDVIWVQWCI-------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 -----~~~~fDlV~~~~~l-------~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e~~ 271 (280)
..+..|+++.+-.. ..++.+++. .+++.+...++++|.|++.--+
T Consensus 120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 01368999876332 222333333 3455667778888988876443
No 416
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=78.56 E-value=10 Score=31.69 Aligned_cols=91 Identities=13% Similarity=0.081 Sum_probs=53.4
Q ss_pred cEEEeecCc-c-HHHHHHHHhcCC-cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCC-cEEEEE
Q 023562 160 VALDCGSGI-G-RITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-RYDVIW 235 (280)
Q Consensus 160 ~VLDlGcG~-G-~~s~~l~~~~~~-~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~fDlV~ 235 (280)
+|.=+|+|. | .++..+.+.+.. +|+++|.++..++.+++. +. ... ...+..+. -. ..|+|+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~-------~~~-~~~~~~~~---~~~~aDvVi 67 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI-------IDE-GTTSIAKV---EDFSPDFVM 67 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS-------CSE-EESCGGGG---GGTCCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CC-------ccc-ccCCHHHH---hcCCCCEEE
Confidence 577788875 2 233334444542 699999999888776542 11 001 11222221 13 568887
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.+- ++.....++..+...++++.+++..-+
T Consensus 68 lav-----p~~~~~~v~~~l~~~l~~~~iv~~~~~ 97 (281)
T 2g5c_A 68 LSS-----PVRTFREIAKKLSYILSEDATVTDQGS 97 (281)
T ss_dssp ECS-----CHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred EcC-----CHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 653 334556788888888999886665333
No 417
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=78.47 E-value=6.1 Score=33.00 Aligned_cols=107 Identities=18% Similarity=0.126 Sum_probs=64.3
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeC-CHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC------
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~-S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (280)
.++++|=.|++.|. ++..|++++. +|.+++. +...++...+.+... +.++.++.+|+.+...
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKAL-------GSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHH
Confidence 34678888877663 4555666666 4887764 455555554444332 3467888999887430
Q ss_pred ----CCCcEEEEEccchhh------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEecc
Q 023562 227 ----ETGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 ----~~~~fDlV~~~~~l~------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e~~ 271 (280)
..++.|+++.+-.+. .++.+++. .+.+.+...++++|.|++.-..
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 013689998763322 22333433 2445677778888988876443
No 418
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=77.91 E-value=6.9 Score=32.79 Aligned_cols=69 Identities=16% Similarity=0.103 Sum_probs=43.8
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeCCH--HHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----C
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVS--HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~--~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~ 226 (280)
+++.+|-=|++.|. ++..|++.+.. |..+|.+. +..+..++. +.++.++.+|+.+.. .
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~~~~~~~-----------g~~~~~~~~Dv~d~~~v~~~~ 75 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAE-VVCAARRAPDETLDIIAKD-----------GGNASALLIDFADPLAAKDSF 75 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHT-----------TCCEEEEECCTTSTTTTTTSS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCE-EEEEeCCcHHHHHHHHHHh-----------CCcEEEEEccCCCHHHHHHHH
Confidence 35567777777763 45666666764 88888764 233333222 345778888887643 2
Q ss_pred CCCcEEEEEcc
Q 023562 227 ETGRYDVIWVQ 237 (280)
Q Consensus 227 ~~~~fDlV~~~ 237 (280)
..++.|+++.+
T Consensus 76 ~~g~iDiLVNN 86 (247)
T 4hp8_A 76 TDAGFDILVNN 86 (247)
T ss_dssp TTTCCCEEEEC
T ss_pred HhCCCCEEEEC
Confidence 34689999876
No 419
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.91 E-value=3.3 Score=34.69 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=46.4
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHc---CcCCCCCCCCCcceeEEEccCCCCCC-----
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESL---APENHMAPDMHKATNFFCVPLQDFTP----- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~---~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++...+.+ ... ..++.++.+|+.+...
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~ 77 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVS-------EQNVNSVVADVTTDAGQDEIL 77 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCC-------GGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccC-------CCceeEEecccCCHHHHHHHH
Confidence 356777776654 23444555665 5999999988777665544 211 2457888889876420
Q ss_pred C-----CCcEEEEEccch
Q 023562 227 E-----TGRYDVIWVQWC 239 (280)
Q Consensus 227 ~-----~~~fDlV~~~~~ 239 (280)
. .+.+|+++.+-.
T Consensus 78 ~~~~~~~g~id~lv~~Ag 95 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAG 95 (278)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 0 126899887643
No 420
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.89 E-value=11 Score=33.17 Aligned_cols=101 Identities=13% Similarity=0.037 Sum_probs=58.6
Q ss_pred CccEEEeecCc-c-HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCC-CCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH-MAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 158 ~~~VLDlGcG~-G-~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~-~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
..+|.=+|+|. | .++..|++.+. .|++.|.++..++..++......+ .......++.+. .|+.+. -...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---LEGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---HTTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---HhcCCEE
Confidence 35899999985 2 23344444454 599999999988887765322100 000111122221 122111 1346888
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+.. ++...+..+++.+...++|+-.++..
T Consensus 104 ila-----Vp~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 104 LIV-----VPSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EEC-----CCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEC-----CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 765 23446778999999999998876554
No 421
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=77.87 E-value=5.6 Score=34.00 Aligned_cols=89 Identities=10% Similarity=-0.005 Sum_probs=52.8
Q ss_pred CccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 158 HLVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 158 ~~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
..+|.=||+|.= .++..|++.++ .|++.|.++..++.+.+.- ......+..+.. ...|+|+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g-------------~~~~~~~~~e~~---~~aDvvi 69 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEG-------------ACGAAASAREFA---GVVDALV 69 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT-------------CSEEESSSTTTT---TTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcC-------------CccccCCHHHHH---hcCCEEE
Confidence 357888988752 23444555555 5999999998888766531 111233444332 3468887
Q ss_pred ccchhhcCChhhHHHHH---HHHHHcCCCCcEEEE
Q 023562 236 VQWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVL 267 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l---~~~~r~LkpGG~lii 267 (280)
.+-.- +.....++ +.+...++||..++-
T Consensus 70 ~~vp~----~~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 70 ILVVN----AAQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp ECCSS----HHHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred EECCC----HHHHHHHHhChhhHHhhCCCCCEEEe
Confidence 65331 12344555 666777888776653
No 422
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=77.86 E-value=8.3 Score=37.24 Aligned_cols=115 Identities=13% Similarity=0.103 Sum_probs=71.8
Q ss_pred CCccEEEeecCccHHHHHHHHhcC-------CcEEEEeCC-HHHHHHHHHHcCcCC-------------CCC-----CCC
Q 023562 157 QHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPV-SHFLDAARESLAPEN-------------HMA-----PDM 210 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~~~~~-------~~v~~vD~S-~~~l~~A~~~~~~~~-------------~~~-----~~~ 210 (280)
+...|+-||||.=.....|...+. ..+..+|++ |+.++.=++.+.... ... .-.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 346799999999888887765422 235554443 333333223332100 000 000
Q ss_pred CcceeEEEccCCCCC----------C-CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccCC
Q 023562 211 HKATNFFCVPLQDFT----------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (280)
Q Consensus 211 ~~~i~~~~~d~~~~~----------~-~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (280)
..+..++..|+.+.. + ....--++++-.++.|+++++...+|+.+.+. |+|.+++.|.+..
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~ 258 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIP 258 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecC
Confidence 135678888988741 1 33445666777999999999999999999864 7888888887654
No 423
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=77.81 E-value=10 Score=30.49 Aligned_cols=88 Identities=13% Similarity=0.037 Sum_probs=54.9
Q ss_pred cEEEeecCccHHHHHHHH----hcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCcE
Q 023562 160 VALDCGSGIGRITKNLLI----RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (280)
Q Consensus 160 ~VLDlGcG~G~~s~~l~~----~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~f 231 (280)
+|+=+|+ |.++..+++ .+. .|+++|.+++.++...+.. ...++.+|..+.. ..-..+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~------------~~~~i~gd~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL------------KATIIHGDGSHKEILRDAEVSKN 66 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS------------SSEEEESCTTSHHHHHHHTCCTT
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc------------CCeEEEcCCCCHHHHHhcCcccC
Confidence 4666776 556555543 344 6999999999887655432 2456778876532 112467
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
|+|++... ++....++....+.+.|...++.
T Consensus 67 d~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 67 DVVVILTP-----RDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CEEEECCS-----CHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CEEEEecC-----CcHHHHHHHHHHHHHcCCCeEEE
Confidence 88876532 23444566666777777776665
No 424
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=76.90 E-value=0.77 Score=40.22 Aligned_cols=55 Identities=13% Similarity=0.064 Sum_probs=36.0
Q ss_pred eeEE-EccCCCC--CCCCCcEEEEEccchh--h------cCCh-hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 214 TNFF-CVPLQDF--TPETGRYDVIWVQWCI--G------HLTD-DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 214 i~~~-~~d~~~~--~~~~~~fDlV~~~~~l--~------~~~~-~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
..++ ++|..+. .+++++||+|++.--. . +-.. ..+...+..+.++|+|||.+++.
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4566 7776442 2345789999976221 1 1000 13467888999999999999885
No 425
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=76.66 E-value=14 Score=31.14 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=55.6
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
.+|.=+|+|.- .++..|++.+. +|+++|.++..++..++.-............++.+. +..+....-..+|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIF--SPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEE--CGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceee--cchhhcccCCCCCEEEE
Confidence 47888998753 23344444555 699999999888877654110000000000001111 11111100026788887
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+-- +.....+++.+...++|+..++..-
T Consensus 81 ~v~-----~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 81 LTK-----AQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CSC-----HHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred Eec-----cccHHHHHHHHHHhcCCCCEEEEec
Confidence 543 2356688899999999888766543
No 426
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=76.58 E-value=3 Score=36.51 Aligned_cols=92 Identities=5% Similarity=-0.049 Sum_probs=53.6
Q ss_pred ccEEEe-ec-CccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------CCCCc
Q 023562 159 LVALDC-GS-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PETGR 230 (280)
Q Consensus 159 ~~VLDl-Gc-G~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 230 (280)
.+||=. |+ |.|..+..+++....+|++++.+++-++.+++.-.. ..+..+-.++. .....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAA------------HVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCS------------EEEETTSTTHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEECCcHHHHHHHHHHhcCCC
Confidence 355543 22 345666666655444799999999999988764321 11111111110 00125
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (280)
+|+|+-+-.- ..+..+.+.|+++|.+++.-..
T Consensus 234 ~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 234 PRIFLDAVTG---------PLASAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp CCEEEESSCH---------HHHHHHHHHSCTTCEEEECCCS
T ss_pred CcEEEECCCC---------hhHHHHHhhhcCCCEEEEEecc
Confidence 8998865331 2346678899999999986433
No 427
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=76.51 E-value=13 Score=27.94 Aligned_cols=92 Identities=14% Similarity=0.117 Sum_probs=55.9
Q ss_pred ccEEEeecCccHHHHHHHH----hcCCcEEEEeCC-HHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCC
Q 023562 159 LVALDCGSGIGRITKNLLI----RYFNEVDLLEPV-SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~~----~~~~~v~~vD~S-~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 229 (280)
.+|+=+|+ |.++..+++ .+. .|+++|.+ +...+..++... ..+.++.+|..+.. ..-.
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~----------~~~~~i~gd~~~~~~l~~a~i~ 70 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG----------DNADVIPGDSNDSSVLKKAGID 70 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC----------TTCEEEESCTTSHHHHHHHTTT
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc----------CCCeEEEcCCCCHHHHHHcChh
Confidence 46888876 666655543 344 59999997 455544444332 23667888876532 1124
Q ss_pred cEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 230 ~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
.+|+|++... +++....+....+.+.|...++..
T Consensus 71 ~ad~vi~~~~-----~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 71 RCRAILALSD-----NDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp TCSEEEECSS-----CHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hCCEEEEecC-----ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 6788876543 234445666677777777777664
No 428
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=75.64 E-value=1 Score=40.18 Aligned_cols=98 Identities=10% Similarity=0.022 Sum_probs=51.2
Q ss_pred CCccEEEeecCccHHHHHH---HHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 157 QHLVALDCGSGIGRITKNL---LIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l---~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
++.+|+=+|+| .++..+ +.....+|+++|.++.-++.+++.... .+.....+..++...-..+|+
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~----------~~~~~~~~~~~l~~~~~~~Dv 232 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG----------RVITLTATEANIKKSVQHADL 232 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----------SEEEEECCHHHHHHHHHHCSE
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc----------eEEEecCCHHHHHHHHhCCCE
Confidence 45789999984 444333 333233799999999888877654421 111111111111000125788
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|+.+-...... ...-+.+.+.+.++|||.++..
T Consensus 233 Vi~~~g~~~~~--~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 233 LIGAVLVPGAK--APKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp EEECCC---------CCSCHHHHTTSCTTCEEEEC
T ss_pred EEECCCCCccc--cchhHHHHHHHhhcCCCEEEEE
Confidence 87653322100 0011245667788999987754
No 429
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=75.55 E-value=5.3 Score=33.46 Aligned_cols=104 Identities=18% Similarity=0.130 Sum_probs=61.9
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEE-eCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-------
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~v-D~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (280)
++++|=.|++.| .++..|++++.. |.++ ..++..++...+.+... ..++.++.+|+.+...
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAA-------GGKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHHH
Confidence 457888887666 245566667764 7776 44555555554444332 3457888899887430
Q ss_pred ---CCCcEEEEEccchhh------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 023562 227 ---ETGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ---~~~~fDlV~~~~~l~------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (280)
..++.|+++.+-.+. ..+++++. .+++.+...++++|.|++.-
T Consensus 99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 013799998764322 23333333 24556667777888887753
No 430
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=75.38 E-value=12 Score=31.28 Aligned_cols=86 Identities=12% Similarity=-0.018 Sum_probs=52.6
Q ss_pred cEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEcc
Q 023562 160 VALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (280)
Q Consensus 160 ~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~ 237 (280)
+|.=+|||.= .++..+.+.+. +|+++|.++..++.+++. +. ... ...++.+. ...|+|+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~-------~~~-~~~~~~~~----~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER----QL-------VDE-AGQDLSLL----QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TS-------CSE-EESCGGGG----TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC----CC-------Ccc-ccCCHHHh----CCCCEEEEE
Confidence 5777888752 23344444555 699999999888776532 11 001 12233322 357888765
Q ss_pred chhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
-- +.....+++.+...++|+..++-
T Consensus 65 v~-----~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 65 TP-----IQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp SC-----HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred CC-----HHHHHHHHHHHHhhCCCCCEEEE
Confidence 33 33566788889888998876643
No 431
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=75.24 E-value=1.2 Score=39.89 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=52.4
Q ss_pred CCccEEEeecCccHHHHHH---HHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEE
Q 023562 157 QHLVALDCGSGIGRITKNL---LIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l---~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (280)
++.+|+=+|+| .++..+ +.. +. +|+++|.++.-++.+++.+... +.....+..++...-..+|
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~----------~~~~~~~~~~l~~~l~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGR----------IHTRYSSAYELEGAVKRAD 233 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTS----------SEEEECCHHHHHHHHHHCS
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCe----------eEeccCCHHHHHHHHcCCC
Confidence 46789999985 444433 322 44 7999999999888877654321 1111101001100012579
Q ss_pred EEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 233 lV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+|+.+-.......+. -+.+.+.+.|||||.|+..
T Consensus 234 vVi~~~~~p~~~t~~--li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 234 LVIGAVLVPGAKAPK--LVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp EEEECCCCTTSCCCC--CBCHHHHTTSCTTCEEEEG
T ss_pred EEEECCCcCCCCCcc--eecHHHHhcCCCCcEEEEE
Confidence 988743211100001 1245566789999988754
No 432
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=75.10 E-value=8.7 Score=33.40 Aligned_cols=100 Identities=13% Similarity=-0.013 Sum_probs=58.1
Q ss_pred ccEEEeecCc--cHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCc-------CCCCCCCC-----CcceeEEEccCCCC
Q 023562 159 LVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------ENHMAPDM-----HKATNFFCVPLQDF 224 (280)
Q Consensus 159 ~~VLDlGcG~--G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~-------~~~~~~~~-----~~~i~~~~~d~~~~ 224 (280)
.+|.=||+|. +.++..+++.++. |++.|.+++.++.+++.+.. .|+..... ..++.+. .|+.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 4788899986 2445556666774 99999999999988664311 11100000 0012222 232211
Q ss_pred CCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 225 ~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
-...|+|+.+-.- ..+-...+++++...++|+.+|+
T Consensus 85 ---v~~aDlVieavpe---~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 85 ---VEGVVHIQECVPE---NLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp ---TTTEEEEEECCCS---CHHHHHHHHHHHHTTCCSSSEEE
T ss_pred ---HhcCCEEEEeccC---CHHHHHHHHHHHHhhCCCCeEEE
Confidence 1457998865320 01123578899999999988654
No 433
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=74.85 E-value=14 Score=30.67 Aligned_cols=76 Identities=11% Similarity=0.013 Sum_probs=45.9
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C--
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~-- 227 (280)
+.+||=.|++.| .++..|++++. +|.+++.++..++...+.+...+. ..++.++.+|+.+... .
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGY-----PGTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCC-----CceEEEEEecCCCHHHHHHHHHHH
Confidence 356787776544 23344455565 599999998777665554433211 2357788889876421 0
Q ss_pred ---CCcEEEEEccch
Q 023562 228 ---TGRYDVIWVQWC 239 (280)
Q Consensus 228 ---~~~fDlV~~~~~ 239 (280)
.+.+|+|+.+-.
T Consensus 106 ~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 106 RSQHSGVDICINNAG 120 (279)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 126899887643
No 434
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=74.80 E-value=6.3 Score=33.52 Aligned_cols=106 Identities=13% Similarity=0.070 Sum_probs=64.2
Q ss_pred CCccEEEeecC----ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----
Q 023562 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (280)
Q Consensus 157 ~~~~VLDlGcG----~G~-~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (280)
.+.++|-.|++ .|. ++..|++++. +|.+++.++...+.+++..... ..+.++.+|+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~ 99 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESL--------GVKLTVPCDVSDAESVDNMF 99 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHH--------TCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhc--------CCeEEEEcCCCCHHHHHHHH
Confidence 34678888874 342 5566666676 4999999876555554443331 235778889877420
Q ss_pred C-----CCcEEEEEccchhh----------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEecc
Q 023562 227 E-----TGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 227 ~-----~~~fDlV~~~~~l~----------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e~~ 271 (280)
. -++.|+++.+-.+. ..+.+++. .+++.+...++.+|.|++.-.+
T Consensus 100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~ 170 (296)
T 3k31_A 100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY 170 (296)
T ss_dssp HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence 0 13689998764322 23333333 2445666777888988876443
No 435
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=74.57 E-value=5.7 Score=33.43 Aligned_cols=106 Identities=20% Similarity=0.192 Sum_probs=59.2
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHH-HHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C-
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~-~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~- 227 (280)
++++|=.|++.| .++..|++++. +|.+++.++. ..+...+.+... +.++.++.+|+.+... .
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKN-------GSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHh-------CCCeEEEEcCCCCHHHHHHHHHH
Confidence 456777777655 23444455565 5988887753 334333333221 2357788888876420 0
Q ss_pred ----CCcEEEEEccchhhc------CChhhHHH-----------HHHHHHHcCCCCcEEEEEecc
Q 023562 228 ----TGRYDVIWVQWCIGH------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKENI 271 (280)
Q Consensus 228 ----~~~fDlV~~~~~l~~------~~~~d~~~-----------~l~~~~r~LkpGG~lii~e~~ 271 (280)
.+..|+++.+-.+.. .+++++.. +++.+...|+.+|.|++.-.+
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 165 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence 136899987643222 23333332 345666777778888776443
No 436
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=73.26 E-value=5.6 Score=34.40 Aligned_cols=101 Identities=11% Similarity=-0.021 Sum_probs=54.6
Q ss_pred CCccEEEeecCc-c-HHHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 157 QHLVALDCGSGI-G-RITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 157 ~~~~VLDlGcG~-G-~~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
+..+|.=+|+|. | .++..++..+. ..+..+|++++....+....... ..++... .|.+++ ...|+
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~-------~~~i~~t-~d~~~l----~~aD~ 80 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN-------LPNVEIS-KDLSAS----AHSKV 80 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT-------CTTEEEE-SCGGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc-------CCCeEEe-CCHHHH----CCCCE
Confidence 346899999995 3 25555565554 36999999986433343332110 1134332 444332 35688
Q ss_pred EEccchhhc--------C--ChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 234 IWVQWCIGH--------L--TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 234 V~~~~~l~~--------~--~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|+..-.... + +-+-...+++.+.+.. |++++++..|
T Consensus 81 Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sN 126 (303)
T 2i6t_A 81 VIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQ 126 (303)
T ss_dssp EEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSS
T ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCC
Confidence 887642110 0 0012466777777775 9999888665
No 437
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=72.74 E-value=11 Score=31.00 Aligned_cols=70 Identities=13% Similarity=0.034 Sum_probs=44.2
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C--
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~-- 227 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++...+.+ ..++.++.+|+.+... .
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~ 73 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL----------GDAARYQHLDVTIEEDWQRVVAYA 73 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT----------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh----------CCceeEEEecCCCHHHHHHHHHHH
Confidence 457888887555 23445555666 5999999987766554433 2347778888876420 0
Q ss_pred ---CCcEEEEEccc
Q 023562 228 ---TGRYDVIWVQW 238 (280)
Q Consensus 228 ---~~~fDlV~~~~ 238 (280)
.++.|+++.+-
T Consensus 74 ~~~~g~iD~lv~nA 87 (254)
T 1hdc_A 74 REEFGSVDGLVNNA 87 (254)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13689998764
No 438
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=72.51 E-value=1 Score=39.99 Aligned_cols=99 Identities=8% Similarity=0.039 Sum_probs=52.7
Q ss_pred CCccEEEeecCc-cHHHHHHHHh-cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 157 QHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~-G~~s~~l~~~-~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
++.+|+=+|+|. |..+..++.. +. +|+++|.++.-++.+++.... .+.....+..++...-..+|+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~DvV 234 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS----------RVELLYSNSAEIETAVAEADLL 234 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG----------GSEEEECCHHHHHHHHHTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc----------eeEeeeCCHHHHHHHHcCCCEE
Confidence 347999999853 2223333333 55 799999999988888765432 1111111111110000258999
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+.+-.......+. -+.+...+.|+|||.++..
T Consensus 235 I~~~~~~~~~~~~--li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 235 IGAVLVPGRRAPI--LVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp EECCCCTTSSCCC--CBCHHHHTTSCTTCEEEET
T ss_pred EECCCcCCCCCCe--ecCHHHHhhCCCCCEEEEE
Confidence 8654322210001 1134456788999987754
No 439
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=72.19 E-value=1.4 Score=33.56 Aligned_cols=41 Identities=22% Similarity=0.274 Sum_probs=28.0
Q ss_pred CCCCcEEEEEccchhhcCChhhH-HHHHHHHHHcCCCCcEEEE
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDF-VSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~-~~~l~~~~r~LkpGG~lii 267 (280)
++..+||.|+...--.. ....+ ..++..+...|||||.|.-
T Consensus 55 Lp~stYD~V~~lt~~~~-~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQ-TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSS-CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCcc-chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45679999985422110 00122 6899999999999999873
No 440
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=71.99 E-value=3.5 Score=35.51 Aligned_cols=56 Identities=27% Similarity=0.317 Sum_probs=34.4
Q ss_pred eeEE-EccCCCCCCCCCcEEEEEccch----hhc-C--Ch-h-hHHHHHHHHHHcCCCCcEEEEEec
Q 023562 214 TNFF-CVPLQDFTPETGRYDVIWVQWC----IGH-L--TD-D-DFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 214 i~~~-~~d~~~~~~~~~~fDlV~~~~~----l~~-~--~~-~-d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.++. .+|+.+-.. .++||+|++... -|| - .| . -+.-+++.+.++|+|||.+++.-+
T Consensus 190 At~~~~lDfg~p~~-~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 190 ATFRARLDLGIPGD-VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp CSEECCGGGCSCTT-SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred ceeecccccCCccc-cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 3344 556555332 267999998733 223 1 11 1 123477888899999999998743
No 441
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=71.72 E-value=7.8 Score=31.68 Aligned_cols=73 Identities=15% Similarity=0.060 Sum_probs=49.0
Q ss_pred CCCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------C
Q 023562 156 NQHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (280)
Q Consensus 156 ~~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (280)
.++.+||=.|++.| .++..|++++. +|.+++.++..++...+.+. .++.+..+|+.+.. .
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~ 80 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK----------DNYTIEVCNLANKEECSNLIS 80 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----------SSEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc----------cCccEEEcCCCCHHHHHHHHH
Confidence 35568888887665 24455555665 59999999988887766653 24777888887642 1
Q ss_pred CCCcEEEEEccch
Q 023562 227 ETGRYDVIWVQWC 239 (280)
Q Consensus 227 ~~~~fDlV~~~~~ 239 (280)
..++.|+++.+-.
T Consensus 81 ~~~~id~li~~Ag 93 (249)
T 3f9i_A 81 KTSNLDILVCNAG 93 (249)
T ss_dssp TCSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1146899887643
No 442
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=71.68 E-value=6.6 Score=32.69 Aligned_cols=103 Identities=15% Similarity=0.173 Sum_probs=58.6
Q ss_pred CCccEEEeecCccHHHHHHH----HhcCCcEEEEeCC---HHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC---
Q 023562 157 QHLVALDCGSGIGRITKNLL----IRYFNEVDLLEPV---SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--- 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G~~s~~l~----~~~~~~v~~vD~S---~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--- 226 (280)
.++++|=.|++.| ++..++ +++. +|.+++.+ ...++...+.+... +.++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~ 80 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQ-------GAKVALYQSDLSNEEEVAK 80 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTT-------TCEEEEEECCCCSHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHH
Confidence 3457887777655 444444 3444 58887654 34444444444332 3468888999887430
Q ss_pred -------CCCcEEEEEccchh------hcCChhhHHH-----------HHHHHHHcCCCCcEEEEE
Q 023562 227 -------ETGRYDVIWVQWCI------GHLTDDDFVS-----------FFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 227 -------~~~~fDlV~~~~~l------~~~~~~d~~~-----------~l~~~~r~LkpGG~lii~ 268 (280)
..++.|+++.+-.+ ...+.+++.. +++.+...|+++|.|++.
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 01479999876332 2233344332 344555566778887765
No 443
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=71.57 E-value=17 Score=30.58 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=52.4
Q ss_pred ccEEEeec-Cc-c-HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 159 LVALDCGS-GI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 159 ~~VLDlGc-G~-G-~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.+|.=+|+ |. | .++..|.+.+. +|+++|.++..++.+++. +. .. .+..+. -...|+|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~----g~---------~~--~~~~~~---~~~aDvVi 72 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM----GI---------PL--TDGDGW---IDEADVVV 72 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT----TC---------CC--CCSSGG---GGTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc----CC---------Cc--CCHHHH---hcCCCEEE
Confidence 47899998 75 3 23444555555 699999999888776551 11 11 122111 13578887
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
.+-. +.....+++.+...++||..++
T Consensus 73 ~av~-----~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 73 LALP-----DNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ECSC-----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred EcCC-----chHHHHHHHHHHHhCCCCCEEE
Confidence 6533 3456688888888888877654
No 444
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=71.34 E-value=15 Score=33.59 Aligned_cols=100 Identities=17% Similarity=0.135 Sum_probs=56.6
Q ss_pred CccEEEeecCc-c-HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCc-------CC-CCCCCC-CcceeEEEccCCCCCC
Q 023562 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------EN-HMAPDM-HKATNFFCVPLQDFTP 226 (280)
Q Consensus 158 ~~~VLDlGcG~-G-~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~-------~~-~~~~~~-~~~i~~~~~d~~~~~~ 226 (280)
..+|.-||+|. | .++..++..++ .|+++|.++..++.+++.+.. .+ +..... .....+ ..+++.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~-- 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL-- 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH--
Confidence 35799999987 3 34444555555 599999999998887653211 00 000000 011122 3343221
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
...|+|+.+-. . ..+-...+++++...++|+.+|+
T Consensus 113 --~~aDlVIeaVp-e--~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 113 --STVDLVVEAVF-E--DMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp --TTCSEEEECCC-S--CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred --CCCCEEEEcCC-C--CHHHHHHHHHHHHhhCCCCeEEE
Confidence 35688876532 1 11123578889999999887664
No 445
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=71.29 E-value=14 Score=31.85 Aligned_cols=101 Identities=14% Similarity=-0.009 Sum_probs=57.0
Q ss_pred CccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 158 HLVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 158 ~~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
..+|.=+|+|.= .++..|++.+. .|+.+ .+++.++..++.-............++.. ..+.+. ...+|+|+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~~----~~~~D~vi 91 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPSA----VQGADLVL 91 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGGG----GTTCSEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHHH----cCCCCEEE
Confidence 468999999853 33444444454 69999 88888887765421100000000001111 112221 14689887
Q ss_pred ccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
..-- ..++..+++.+...++|+..++..-|
T Consensus 92 lavk-----~~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 92 FCVK-----STDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp ECCC-----GGGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred EEcc-----cccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 7532 23566899999999999987766543
No 446
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=71.18 E-value=9 Score=33.22 Aligned_cols=100 Identities=13% Similarity=0.064 Sum_probs=54.8
Q ss_pred ccEEEeecCc-c-HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCC--cceeEEEccCCCCCCCCCcEEEE
Q 023562 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 159 ~~VLDlGcG~-G-~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.+|.=+|+|. | .++..|++.+. .|+++|.++..++..++..... +...... .++.....+..+. ...+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAII-AEGPGLAGTAHPDLLTSDIGLA---VKDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEE-EESSSCCEEECCSEEESCHHHH---HTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeE-EeccccccccccceecCCHHHH---HhcCCEE
Confidence 5789999876 2 23344444555 5999999998888776652110 0000000 0000111121110 1357888
Q ss_pred EccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+.+-- ......+++.+...+++|..++..
T Consensus 80 i~~v~-----~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 80 LIVVP-----AIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EECSC-----GGGHHHHHHHHGGGCCTTCEEEES
T ss_pred EEeCC-----chHHHHHHHHHHHhCCCCCEEEEc
Confidence 76533 223457888898999998766554
No 447
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=71.10 E-value=9.1 Score=32.12 Aligned_cols=73 Identities=19% Similarity=0.142 Sum_probs=51.8
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-------
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (280)
+++.+|--|++.|. ++..|++.+. +|..+|.+++.++...+.+... +.++.++.+|+.+...
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~-------g~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGM-------GKEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 34577777877763 4555666666 5999999999988877776543 3568889999976530
Q ss_pred ---CCCcEEEEEcc
Q 023562 227 ---ETGRYDVIWVQ 237 (280)
Q Consensus 227 ---~~~~fDlV~~~ 237 (280)
.-++.|+++.+
T Consensus 78 ~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 78 TFETYSRIDVLCNN 91 (254)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 11578999866
No 448
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=70.32 E-value=9.1 Score=32.35 Aligned_cols=100 Identities=13% Similarity=0.043 Sum_probs=55.5
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcC---------CCCCCCC---CcceeEEEccCCCC
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE---------NHMAPDM---HKATNFFCVPLQDF 224 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~---------~~~~~~~---~~~i~~~~~d~~~~ 224 (280)
.+|.=+|+|.= .++..++..++ +|+++|.+++.++.+++.+... ++..... ..++.+ ..++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 46888888752 23444455565 5999999999998887653110 0000000 001122 2232211
Q ss_pred CCCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 225 ~~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
-...|+|+.+-.-. .+....+++++...++|+.+++
T Consensus 83 ---~~~aDlVi~av~~~---~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 ---VKDADLVIEAVPES---LDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ---TTTCSEEEECCCSC---HHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---hccCCEEEEeccCc---HHHHHHHHHHHHhhCCCCcEEE
Confidence 13568887653210 1144678899999999988653
No 449
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=70.13 E-value=23 Score=29.71 Aligned_cols=88 Identities=15% Similarity=0.008 Sum_probs=52.8
Q ss_pred ccEEEeecCcc--HHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEE
Q 023562 159 LVALDCGSGIG--RITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~ 235 (280)
.+|.=||+|.= .++..+.+.+ ...|.++|.++..++.+++.- . ......+..+.. ...|+|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g----~--------~~~~~~~~~~~~---~~aDvVi 71 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERG----I--------VDEATADFKVFA---ALADVII 71 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT----S--------CSEEESCTTTTG---GGCSEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcC----C--------cccccCCHHHhh---cCCCEEE
Confidence 47888998862 3344455554 236999999998887765421 1 001222333221 3578887
Q ss_pred ccchhhcCChhhHHHHHHHHHHc-CCCCcEEE
Q 023562 236 VQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (280)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~-LkpGG~li 266 (280)
.+-- +.....+++.+... ++++.+++
T Consensus 72 lavp-----~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVP-----IKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ECSC-----HHHHHHHHHHHHTSCCCTTCEEE
T ss_pred EcCC-----HHHHHHHHHHHHhcCCCCCCEEE
Confidence 6533 33446788888887 88876655
No 450
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=69.12 E-value=7.3 Score=33.04 Aligned_cols=87 Identities=11% Similarity=-0.014 Sum_probs=53.8
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCC--cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~--~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.+|.=||||.= .++..+++.++. +|+++|.++..++.+.+... +... .+..+.- ...|+|
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g------------i~~~-~~~~~~~---~~aDvV 67 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG------------VHTT-QDNRQGA---LNADVV 67 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC------------CEEE-SCHHHHH---SSCSEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC------------CEEe-CChHHHH---hcCCeE
Confidence 47888999752 244445555642 69999999998887766431 2221 1211110 246888
Q ss_pred EccchhhcCChhhHHHHHHHHHHc-CCCCcEEE
Q 023562 235 WVQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (280)
Q Consensus 235 ~~~~~l~~~~~~d~~~~l~~~~r~-LkpGG~li 266 (280)
+..- ++.....+++++... ++++-.++
T Consensus 68 ilav-----~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 68 VLAV-----KPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp EECS-----CGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred EEEe-----CHHHHHHHHHHHHhhccCCCeEEE
Confidence 7654 344677899999888 87665544
No 451
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=68.07 E-value=14 Score=30.50 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=50.2
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C--
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~-- 227 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++.+.+.+... ..++.++.+|+.+... .
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQF-------PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCS-------TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 457888887655 24455566666 5999999999888887776543 3468888999887420 0
Q ss_pred ---CCcEEEEEccc
Q 023562 228 ---TGRYDVIWVQW 238 (280)
Q Consensus 228 ---~~~fDlV~~~~ 238 (280)
.++.|+++.+-
T Consensus 78 ~~~~g~id~lv~nA 91 (257)
T 3imf_A 78 DEKFGRIDILINNA 91 (257)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13689998763
No 452
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=67.77 E-value=3.1 Score=34.46 Aligned_cols=87 Identities=14% Similarity=0.100 Sum_probs=49.8
Q ss_pred ccEEEeecCcc--HHHHHHHHhcC---CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEE
Q 023562 159 LVALDCGSGIG--RITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~---~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDl 233 (280)
.+|.=||||.= .++..|++.++ ..|.++|.+++.++...+...- .. ..+..+. -...|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~------------~~-~~~~~e~---~~~aDv 66 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGL------------TT-TTDNNEV---AKNADI 66 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCC------------EE-CSCHHHH---HHHCSE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCC------------EE-eCChHHH---HHhCCE
Confidence 36888888853 24445555554 2699999999888877654321 11 1111110 024687
Q ss_pred EEccchhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 023562 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (280)
Q Consensus 234 V~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (280)
|+.+- ++.....+++.+...++||..++
T Consensus 67 Vilav-----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 67 LILSI-----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp EEECS-----CTTTHHHHC---CCSSCTTCEEE
T ss_pred EEEEe-----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 77654 23456678888888888877554
No 453
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=67.74 E-value=11 Score=30.77 Aligned_cols=74 Identities=18% Similarity=0.136 Sum_probs=50.1
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-------
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (280)
.+.+||=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+...
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVAD-------GGTAISVAVDVSDPESAKAMADR 79 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 3457888887665 34555566666 5999999998888776665432 3467888899887420
Q ss_pred ---CCCcEEEEEccc
Q 023562 227 ---ETGRYDVIWVQW 238 (280)
Q Consensus 227 ---~~~~fDlV~~~~ 238 (280)
..++.|+++.+-
T Consensus 80 ~~~~~g~id~li~~A 94 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 013689998764
No 454
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=67.68 E-value=19 Score=29.17 Aligned_cols=90 Identities=12% Similarity=0.001 Sum_probs=56.7
Q ss_pred CccEEEeecCccHHHHHHHHhcCC--cEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCcE
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~--~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~f 231 (280)
..+|+=+|| |.++..+++.... .|+++|.++..++.++ . .+.++.+|..+.. ..-..+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~---~-----------~~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR---S-----------GANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH---T-----------TCEEEESCTTCHHHHHHTTCTTC
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh---c-----------CCeEEEcCCCCHHHHHhcCcchh
Confidence 357888887 5677766654221 1999999998877665 1 1567788876532 112467
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
|+|++... +++....+....+.+.|+..++..
T Consensus 73 d~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 73 RAVIVDLE-----SDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp SEEEECCS-----CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred cEEEEcCC-----CcHHHHHHHHHHHHHCCCCeEEEE
Confidence 88876532 234445556667778888666653
No 455
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=67.58 E-value=18 Score=30.13 Aligned_cols=85 Identities=13% Similarity=0.027 Sum_probs=50.5
Q ss_pred cEEEeecCc-cH-HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEcc
Q 023562 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (280)
Q Consensus 160 ~VLDlGcG~-G~-~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~ 237 (280)
+|.=+|+|. |. ++..+.+ +. +|+++|.++..++.+.+.- +... +..+. -...|+|+.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g-------------~~~~--~~~~~---~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEF-------------GSEA--VPLER---VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHH-------------CCEE--CCGGG---GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCC-------------Cccc--CHHHH---HhCCCEEEEe
Confidence 577889886 33 3444554 55 5999999988777665431 1111 11111 1357888765
Q ss_pred chhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
-.-. .....+++.+...+++|..++..
T Consensus 63 v~~~----~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 63 LPTT----REVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp CSSH----HHHHHHHHHHTTTCCTTEEEEEC
T ss_pred CCCh----HHHHHHHHHHHhhCCCCCEEEEC
Confidence 3311 13556778888888888766643
No 456
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=67.44 E-value=14 Score=30.66 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=51.0
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-------
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (280)
.++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDT-------GRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 3467888888766 34556666666 5999999998888776665432 3468889999887530
Q ss_pred ---CCCcEEEEEccc
Q 023562 227 ---ETGRYDVIWVQW 238 (280)
Q Consensus 227 ---~~~~fDlV~~~~ 238 (280)
..++.|+++.+-
T Consensus 82 ~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 82 TMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 014689998763
No 457
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=66.83 E-value=8.6 Score=31.75 Aligned_cols=75 Identities=11% Similarity=-0.018 Sum_probs=51.0
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C-
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~- 227 (280)
++.++|=.|++.| .++..|++++. +|.+++.++..++...+.+... +.++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAA-------GGRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEECcCCCHHHHHHHHHH
Confidence 3457888888766 34555666666 5999999988877776665442 3468889999887530 0
Q ss_pred ---CCcEEEEEccch
Q 023562 228 ---TGRYDVIWVQWC 239 (280)
Q Consensus 228 ---~~~fDlV~~~~~ 239 (280)
.++.|+++.+-.
T Consensus 78 ~~~~g~id~lv~nAg 92 (252)
T 3h7a_A 78 ADAHAPLEVTIFNVG 92 (252)
T ss_dssp HHHHSCEEEEEECCC
T ss_pred HHhhCCceEEEECCC
Confidence 047899987643
No 458
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=66.59 E-value=7.7 Score=34.64 Aligned_cols=95 Identities=21% Similarity=0.217 Sum_probs=58.3
Q ss_pred CccEEEeecCccHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEcc
Q 023562 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~~ 237 (280)
+.+||.++-+.|.++..+... .+++.+.-|-......+.+ ++ ...+ ...+...+..||+|+..
T Consensus 46 ~~~~l~~n~~~g~~~~~~~~~--~~~~~~~~~~~~~~~l~~~----~~-------~~~~----~~~~~~~~~~~d~v~~~ 108 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLEGR--MAVERLETSRAAFRCLTAS----GL-------QARL----ALPWEAAAGAYDLVVLA 108 (381)
T ss_dssp SSEEEESSCTTSTTTGGGBTT--BEEEEEECBHHHHHHHHHT----TC-------CCEE----CCGGGSCTTCEEEEEEE
T ss_pred CCcEEEecCCCCccccccCCC--CceEEEeCcHHHHHHHHHc----CC-------Cccc----cCCccCCcCCCCEEEEE
Confidence 368999999999877766422 2577776565554443322 21 1111 11122234789999865
Q ss_pred chhhcCChhhHHHHHHHHHHcCCCCcEEEEE-ec
Q 023562 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK-EN 270 (280)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~-e~ 270 (280)
.-=.-- ...++..|..+.+.|+|||.|++. ++
T Consensus 109 ~Pk~k~-~~~~~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 109 LPAGRG-TAYVQASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp CCGGGC-HHHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCcchh-HHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 442100 124678999999999999999876 44
No 459
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=66.33 E-value=4.1 Score=34.83 Aligned_cols=86 Identities=14% Similarity=0.067 Sum_probs=51.8
Q ss_pred ccEEEeecCccH--HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 159 LVALDCGSGIGR--ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 159 ~~VLDlGcG~G~--~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
.+|.=||+|.=. ++..|++.++ .|+++|.++..++.+.+.- +. ...++.+.. . .|+|+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g-------------~~-~~~~~~~~~---~-aDvvi~ 76 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAG-------------AT-LADSVADVA---A-ADLIHI 76 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTT-------------CE-ECSSHHHHT---T-SSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCC-------------CE-EcCCHHHHH---h-CCEEEE
Confidence 478889987532 3344444455 5999999998777665431 11 112222211 3 688776
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
+-.- +.....+++.+...++||.+++-
T Consensus 77 ~vp~----~~~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 77 TVLD----DAQVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp CCSS----HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ECCC----hHHHHHHHHHHHHhcCCCCEEEE
Confidence 5321 23556788888888998877654
No 460
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=65.81 E-value=2 Score=36.54 Aligned_cols=44 Identities=25% Similarity=0.406 Sum_probs=29.7
Q ss_pred CCCCCcEEEEEccc----hhhcCCh-----hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 225 TPETGRYDVIWVQW----CIGHLTD-----DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 225 ~~~~~~fDlV~~~~----~l~~~~~-----~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+..-++||+|+++- =.||..- ..+..+-+...+.|+|||.+++.
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~ 258 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR 258 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 33347999999872 3444321 12455667778999999999985
No 461
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=65.48 E-value=4.7 Score=33.81 Aligned_cols=55 Identities=9% Similarity=0.018 Sum_probs=33.9
Q ss_pred eeEEEccCCCC--CCCCCcEEEEEccchhhcC--------Ch----hhHHHHHHHHHHcCCCCcEEEEE
Q 023562 214 TNFFCVPLQDF--TPETGRYDVIWVQWCIGHL--------TD----DDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 214 i~~~~~d~~~~--~~~~~~fDlV~~~~~l~~~--------~~----~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
..++++|..+. ..++++||+|++.--..-- +. .-+..+++.+.++|+|||.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 34566665332 1234689999876221110 11 13467888899999999998875
No 462
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=65.36 E-value=6.1 Score=33.60 Aligned_cols=87 Identities=14% Similarity=0.139 Sum_probs=51.3
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
.+|.=||||.= .++..|++.++ +|+++|.++..++.+.+. + +. ...+..+.. ...|+|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~----g---------~~-~~~~~~~~~---~~aDvvi~ 65 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA----G---------AS-AARSARDAV---QGADVVIS 65 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT----T---------CE-ECSSHHHHH---TTCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---------Ce-EcCCHHHHH---hCCCeEEE
Confidence 47888999863 34445555565 699999999888776553 1 11 111211111 24588776
Q ss_pred cchhhcCChhhHHHHHH---HHHHcCCCCcEEEE
Q 023562 237 QWCIGHLTDDDFVSFFK---RAKVGLKPGGFFVL 267 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~---~~~r~LkpGG~lii 267 (280)
+-. .+.....++. .+...+++|..++-
T Consensus 66 ~vp----~~~~~~~v~~~~~~~~~~l~~~~~vi~ 95 (302)
T 2h78_A 66 MLP----ASQHVEGLYLDDDGLLAHIAPGTLVLE 95 (302)
T ss_dssp CCS----CHHHHHHHHHSSSCGGGSSCSSCEEEE
T ss_pred ECC----CHHHHHHHHcCchhHHhcCCCCcEEEE
Confidence 532 1224556666 67777888776654
No 463
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=65.28 E-value=20 Score=30.07 Aligned_cols=74 Identities=16% Similarity=0.117 Sum_probs=50.2
Q ss_pred CccEEEeecCccH---HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------
Q 023562 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (280)
+..+|=.|++.|. ++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+...
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGA-------GGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4578888876652 4455566666 5999999998888777766543 3467888999877420
Q ss_pred --CCCcEEEEEccch
Q 023562 227 --ETGRYDVIWVQWC 239 (280)
Q Consensus 227 --~~~~fDlV~~~~~ 239 (280)
..++.|+++.+-.
T Consensus 100 ~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 100 VLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 0136899987633
No 464
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=65.13 E-value=14 Score=31.44 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=51.2
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C-
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~- 227 (280)
.+.+||=.|++.| .++..|++++. +|.+++.++..++.+.+.+... ..++.++.+|+.+... .
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQ-------GFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCceEEEEccCCCHHHHHHHHHH
Confidence 3457888888765 34455566666 5999999999888776665442 3468888999887530 0
Q ss_pred ----CCcEEEEEccch
Q 023562 228 ----TGRYDVIWVQWC 239 (280)
Q Consensus 228 ----~~~fDlV~~~~~ 239 (280)
.+..|+++.+-.
T Consensus 102 ~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHSSCSEEEECCC
T ss_pred HHHhCCCCCEEEECCC
Confidence 136899987633
No 465
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=64.74 E-value=8.4 Score=31.89 Aligned_cols=104 Identities=19% Similarity=0.128 Sum_probs=55.9
Q ss_pred CccEEEeecC----cc-HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C
Q 023562 158 HLVALDCGSG----IG-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E 227 (280)
Q Consensus 158 ~~~VLDlGcG----~G-~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~ 227 (280)
++++|=.|++ .| .++..|++++. +|.+++.++..-+.+++..... ..+.++.+|+.+... .
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~--------~~~~~~~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEAL--------GGALLFRADVTQDEELDALFA 78 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHT--------TCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc--------CCcEEEECCCCCHHHHHHHHH
Confidence 4578888875 23 23444555666 5999998875222222211110 125778888876420 0
Q ss_pred -----CCcEEEEEccchhh----------cCChhhHHHH-----------HHHHHHcCCCCcEEEEEec
Q 023562 228 -----TGRYDVIWVQWCIG----------HLTDDDFVSF-----------FKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 228 -----~~~fDlV~~~~~l~----------~~~~~d~~~~-----------l~~~~r~LkpGG~lii~e~ 270 (280)
.++.|+++.+-.+. ..+.+++... ++.+...++++|.|++.-.
T Consensus 79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 147 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY 147 (261)
T ss_dssp HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 13689998764322 2343444332 3344444555687776543
No 466
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=64.70 E-value=13 Score=32.32 Aligned_cols=97 Identities=10% Similarity=0.061 Sum_probs=53.0
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhc-CCcEEEEeCCHH---HHHHHHHHcCcCCCCCCCCCcceeEEE---ccCCCCC
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRY-FNEVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFC---VPLQDFT 225 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~-~~~v~~vD~S~~---~l~~A~~~~~~~~~~~~~~~~~i~~~~---~d~~~~~ 225 (280)
..++.+||-.|+ |.|.++..+++.. ...|..++.++. -++.+++.-.. .-++... .++.+..
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE---------HVITEEELRRPEMKNFF 235 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS---------EEEEHHHHHSGGGGGTT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc---------EEEecCcchHHHHHHHH
Confidence 557789999996 6788888888764 434455555432 35556543211 0011100 1222221
Q ss_pred CCCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 226 ~~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
...+.+|+|+-+-. .+. +....++|++||.+++.-
T Consensus 236 ~~~~~~Dvvid~~g-----~~~----~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCVG-----GKS----STELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESSC-----HHH----HHHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECCC-----cHH----HHHHHHhhCCCCEEEEEe
Confidence 11124898875422 111 235679999999998763
No 467
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=64.44 E-value=32 Score=27.58 Aligned_cols=70 Identities=23% Similarity=0.205 Sum_probs=42.2
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC------CCC
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PET 228 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 228 (280)
+++||=.|++.| .++..|++++. +|.+++.++..++...+.. ..++++.+|+.+.. ...
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKEC-----------PGIEPVCVDLGDWDATEKALGGI 74 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS-----------TTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc-----------cCCCcEEecCCCHHHHHHHHHHc
Confidence 457887776443 23334455565 5999999987766544432 12556678887642 112
Q ss_pred CcEEEEEccch
Q 023562 229 GRYDVIWVQWC 239 (280)
Q Consensus 229 ~~fDlV~~~~~ 239 (280)
+++|+|+.+-.
T Consensus 75 ~~id~vi~~Ag 85 (244)
T 1cyd_A 75 GPVDLLVNNAA 85 (244)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCc
Confidence 46899987633
No 468
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=63.65 E-value=15 Score=30.24 Aligned_cols=75 Identities=15% Similarity=0.053 Sum_probs=50.3
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C-
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~- 227 (280)
.++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+... .
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQA-------GGKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHH
Confidence 3457888887766 24555666676 4999999998887766655432 3467888899877420 0
Q ss_pred ----CCcEEEEEccch
Q 023562 228 ----TGRYDVIWVQWC 239 (280)
Q Consensus 228 ----~~~fDlV~~~~~ 239 (280)
.++.|+++.+-.
T Consensus 83 ~~~~~g~id~lv~nAg 98 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAG 98 (256)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 136899987643
No 469
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=63.42 E-value=6.9 Score=35.35 Aligned_cols=45 Identities=16% Similarity=0.002 Sum_probs=38.7
Q ss_pred CccEEEeecCccHHHHHHHHhc--CCc----EEEEeCCHHHHHHHHHHcCc
Q 023562 158 HLVALDCGSGIGRITKNLLIRY--FNE----VDLLEPVSHFLDAARESLAP 202 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~~--~~~----v~~vD~S~~~l~~A~~~~~~ 202 (280)
..+|+|+-||.|.....|.+.+ +.. |.++|+++.+++.-+.++..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 4699999999999999998777 344 88899999999998888765
No 470
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=62.96 E-value=8.9 Score=33.40 Aligned_cols=91 Identities=18% Similarity=0.143 Sum_probs=52.0
Q ss_pred CCCCccEEEeec--CccHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----C
Q 023562 155 NNQHLVALDCGS--GIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (280)
Q Consensus 155 ~~~~~~VLDlGc--G~G~~s~~l~~~~-~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~ 226 (280)
..++.+||=.|+ |.|..+..+++.. ...|.+++ ++.-.+.++ ... -.++. .-.++. .
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga-----------~~~~~-~~~~~~~~~~~~ 204 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV-----------THLFD-RNADYVQEVKRI 204 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS-----------SEEEE-TTSCHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC-----------cEEEc-CCccHHHHHHHh
Confidence 567789999998 4577777777653 44788887 555555554 211 01111 111110 1
Q ss_pred CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 227 ~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
..+.+|+|+-+-.- ..+..+.++|+++|.+++.-
T Consensus 205 ~~~g~Dvv~d~~g~---------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 205 SAEGVDIVLDCLCG---------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CTTCEEEEEEECC----------------CTTEEEEEEEEEEC
T ss_pred cCCCceEEEECCCc---------hhHHHHHHHhhcCCEEEEEC
Confidence 12579999864321 12366789999999998763
No 471
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=62.86 E-value=14 Score=30.46 Aligned_cols=75 Identities=20% Similarity=0.119 Sum_probs=49.5
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C-
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~- 227 (280)
.+.+||=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+... .
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAA-------GGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHh-------CCceeEEEecCCCHHHHHHHHHH
Confidence 3457888887655 23445555666 5999999998887776665432 3467888999876431 0
Q ss_pred ----CCcEEEEEccch
Q 023562 228 ----TGRYDVIWVQWC 239 (280)
Q Consensus 228 ----~~~fDlV~~~~~ 239 (280)
.++.|+++.+-.
T Consensus 100 ~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 136899887643
No 472
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=62.85 E-value=18 Score=30.29 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=49.2
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+...
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAA-------GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 457888887665 24555666666 5999999998887776665442 3468888999877420
Q ss_pred --CCCcEEEEEccc
Q 023562 227 --ETGRYDVIWVQW 238 (280)
Q Consensus 227 --~~~~fDlV~~~~ 238 (280)
..++.|+++.+-
T Consensus 96 ~~~~g~id~lv~nA 109 (279)
T 3sju_A 96 VERFGPIGILVNSA 109 (279)
T ss_dssp HHHHCSCCEEEECC
T ss_pred HHHcCCCcEEEECC
Confidence 013689998763
No 473
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=62.81 E-value=20 Score=29.46 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=51.3
Q ss_pred CCccEEEeec-Ccc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C
Q 023562 157 QHLVALDCGS-GIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E 227 (280)
Q Consensus 157 ~~~~VLDlGc-G~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~ 227 (280)
++.+||=.|+ |.| .++..|++++. +|.+++.++.-++...+.+...+ ..++.++.+|+.+... .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLG------LGRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTC------SSCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcC------CCceEEEEeCCCCHHHHHHHHH
Confidence 3567888887 554 24556666666 59999999988877766654321 2468899999987420 0
Q ss_pred -----CCcEEEEEccch
Q 023562 228 -----TGRYDVIWVQWC 239 (280)
Q Consensus 228 -----~~~fDlV~~~~~ 239 (280)
.++.|+++.+-.
T Consensus 94 ~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCCcEEEECCC
Confidence 136799987643
No 474
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=62.57 E-value=8.1 Score=34.19 Aligned_cols=89 Identities=12% Similarity=0.082 Sum_probs=52.7
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
.+|.=||+|.= .++..|++.++ .|+++|.++..++.+.+. +. . ...++.+........|+|++
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~----g~---------~-~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE----GI---------A-GARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----TC---------B-CCSSHHHHHHHSCSSCEEEE
T ss_pred CEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----CC---------E-EeCCHHHHHhcCCCCCEEEE
Confidence 57888988742 23444555565 599999999887766542 11 0 01121111100123488876
Q ss_pred cchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
+-. +.....+++.+...|++|.+|+-
T Consensus 88 ~vp-----~~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 88 MVP-----AAVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp CSC-----GGGHHHHHHHHGGGCCTTCEEEE
T ss_pred eCC-----HHHHHHHHHHHHhhCCCCCEEEe
Confidence 532 23556788889999998877654
No 475
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=62.16 E-value=29 Score=29.82 Aligned_cols=89 Identities=12% Similarity=-0.027 Sum_probs=58.6
Q ss_pred CccEEEeecCccHHHHHHHHh---cCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCc
Q 023562 158 HLVALDCGSGIGRITKNLLIR---YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (280)
Q Consensus 158 ~~~VLDlGcG~G~~s~~l~~~---~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (280)
..+|+=+|+ |..+..+++. ... |+++|.+++.++ +++. .+.++.+|..+.. ..-..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~-------------~~~~i~gd~~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLRS-------------GANFVHGDPTRVSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHT-------------TCEEEESCTTSHHHHHHTCSTT
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhC-------------CcEEEEeCCCCHHHHHhcChhh
Confidence 346888776 6777777654 233 999999999888 6541 2567888887642 22357
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (280)
+|.|++... +++..-......+.+.|...++..
T Consensus 178 a~~vi~~~~-----~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 178 ARAVIVDLE-----SDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp EEEEEECCS-----SHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred ccEEEEcCC-----ccHHHHHHHHHHHHHCCCCeEEEE
Confidence 898887532 334445566677788888776654
No 476
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=61.59 E-value=28 Score=29.79 Aligned_cols=97 Identities=12% Similarity=0.026 Sum_probs=52.4
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHH-cCcCCCCCCCCCcceeEE----EccCCCCCCCCCcE
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARES-LAPENHMAPDMHKATNFF----CVPLQDFTPETGRY 231 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~-~~~~~~~~~~~~~~i~~~----~~d~~~~~~~~~~f 231 (280)
.+|+=+|+|.= .++..|.+.+. .|+.++.++ .+..++. +..... ......+. ..+..+. ...+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~Gl~~~~~----~~g~~~~~~~~~~~~~~~~---~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD--YETVKAKGIRIRSA----TLGDYTFRPAAVVRSAAEL---ETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT--HHHHHHHCEEEEET----TTCCEEECCSCEESCGGGC---SSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh--HHHHHhCCcEEeec----CCCcEEEeeeeeECCHHHc---CCCC
Confidence 47888888853 33444444454 699999886 2544443 110000 00111110 1122221 1368
Q ss_pred EEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 232 DlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|+|+..---..+ ..+++.+...++|+..++..-|
T Consensus 73 DlVilavK~~~~-----~~~l~~l~~~l~~~t~Iv~~~n 106 (320)
T 3i83_A 73 DCTLLCIKVVEG-----ADRVGLLRDAVAPDTGIVLISN 106 (320)
T ss_dssp SEEEECCCCCTT-----CCHHHHHTTSCCTTCEEEEECS
T ss_pred CEEEEecCCCCh-----HHHHHHHHhhcCCCCEEEEeCC
Confidence 999876433332 2578888999999988776544
No 477
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=61.45 E-value=17 Score=29.56 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=49.2
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC---------
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--------- 225 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------- 225 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+..
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEK-------GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHH
Confidence 457888887655 24555566666 5999999998887776665442 346888899987642
Q ss_pred -CCCCcEEEEEccc
Q 023562 226 -PETGRYDVIWVQW 238 (280)
Q Consensus 226 -~~~~~fDlV~~~~ 238 (280)
...++.|+++.+-
T Consensus 77 ~~~~~~id~li~~A 90 (247)
T 3lyl_A 77 KAENLAIDILVNNA 90 (247)
T ss_dssp HHTTCCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 0124689998763
No 478
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=61.33 E-value=15 Score=30.56 Aligned_cols=73 Identities=18% Similarity=0.090 Sum_probs=48.7
Q ss_pred CccEEEeecCccH---HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------
Q 023562 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (280)
++++|=.|++.|. ++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+...
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDA-------GGTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3567888876652 4455566666 5999999998888776665442 3457788889876420
Q ss_pred --CCCcEEEEEccc
Q 023562 227 --ETGRYDVIWVQW 238 (280)
Q Consensus 227 --~~~~fDlV~~~~ 238 (280)
..++.|+++.+-
T Consensus 76 ~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 76 VDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 013689988763
No 479
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=60.81 E-value=22 Score=29.58 Aligned_cols=70 Identities=16% Similarity=0.148 Sum_probs=48.5
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC--------
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------- 225 (280)
.+.++|=.|++.| .++..|++++. +|.+++.++..++...+.+. .++.++.+|+.+..
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~~~~~v~~~~~~ 97 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELG----------NRAEFVSTNVTSEDSVLAAIEA 97 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC----------CceEEEEcCCCCHHHHHHHHHH
Confidence 3457888887666 24555566666 59999999988877766652 35788899987642
Q ss_pred -CCCCcEEEEEcc
Q 023562 226 -PETGRYDVIWVQ 237 (280)
Q Consensus 226 -~~~~~fDlV~~~ 237 (280)
...+..|+++.+
T Consensus 98 ~~~~~~id~lv~~ 110 (281)
T 3ppi_A 98 ANQLGRLRYAVVA 110 (281)
T ss_dssp HTTSSEEEEEEEC
T ss_pred HHHhCCCCeEEEc
Confidence 112478988866
No 480
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=60.55 E-value=26 Score=29.19 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=55.4
Q ss_pred CccEEEeecC----ccH-HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC------
Q 023562 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (280)
Q Consensus 158 ~~~VLDlGcG----~G~-~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (280)
+.+||-.|++ .|. ++..|++++. +|.+++.++..-+.+++..... .++.++.+|+.+...
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~--------~~~~~~~~Dl~~~~~v~~~~~ 91 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGF--------GSDLVVKCDVSLDEDIKNLKK 91 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHT--------TCCCEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhc--------CCeEEEEcCCCCHHHHHHHHH
Confidence 4578888875 332 3344555565 5999998875222222211110 125678888876420
Q ss_pred ----CCCcEEEEEccchhh----------cCChhhHHH-----------HHHHHHHcCC-CCcEEEEEec
Q 023562 227 ----ETGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKVGLK-PGGFFVLKEN 270 (280)
Q Consensus 227 ----~~~~fDlV~~~~~l~----------~~~~~d~~~-----------~l~~~~r~Lk-pGG~lii~e~ 270 (280)
..++.|+++.+-.+. ..+.+++.. +++.+...++ .+|.|++.-.
T Consensus 92 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 161 (285)
T 2p91_A 92 FLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSY 161 (285)
T ss_dssp HHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 013689998764322 233344332 3344555554 5687776543
No 481
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=60.24 E-value=15 Score=32.00 Aligned_cols=97 Identities=8% Similarity=-0.105 Sum_probs=53.0
Q ss_pred CCCC-ccEEEeec--CccHHHHHHHHhcCCcEEEEeCCHHH----HHHHHHHcCcCCCCCCCCCcceeEEE---ccCCC-
Q 023562 155 NNQH-LVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHF----LDAARESLAPENHMAPDMHKATNFFC---VPLQD- 223 (280)
Q Consensus 155 ~~~~-~~VLDlGc--G~G~~s~~l~~~~~~~v~~vD~S~~~----l~~A~~~~~~~~~~~~~~~~~i~~~~---~d~~~- 223 (280)
..++ .+||-.|+ |.|..+..+++....+++++..++.- .+.+++.-.. .-++... .++.+
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~ 234 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---------QVITEDQNNSREFGPT 234 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---------EEEEHHHHHCGGGHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---------EEEecCccchHHHHHH
Confidence 4567 89999986 56777887877644457777544332 4455433211 0011110 11110
Q ss_pred CC--C--CCCcEEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 023562 224 FT--P--ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (280)
Q Consensus 224 ~~--~--~~~~fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (280)
+. . ....+|+|+-+-.- . .+. .+.++|+++|.+++.-
T Consensus 235 i~~~t~~~~~g~Dvvid~~G~------~--~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 235 IKEWIKQSGGEAKLALNCVGG------K--SST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHHHHTCCEEEEEESSCH------H--HHH-HHHHTSCTTCEEEECC
T ss_pred HHHHhhccCCCceEEEECCCc------h--hHH-HHHHHhccCCEEEEec
Confidence 00 0 12469999855321 1 233 5679999999998764
No 482
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=59.94 E-value=16 Score=30.24 Aligned_cols=102 Identities=14% Similarity=-0.003 Sum_probs=58.5
Q ss_pred CccEEEeec-CccHHHH----HHHHhcCCcEEEEeCCHHH-HHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----
Q 023562 158 HLVALDCGS-GIGRITK----NLLIRYFNEVDLLEPVSHF-LDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (280)
Q Consensus 158 ~~~VLDlGc-G~G~~s~----~l~~~~~~~v~~vD~S~~~-l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (280)
++++|=.|+ |+|.++. .|++++. +|.+++.++.- ++...+.+ ..++.++.+|+.+...
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~ 75 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL----------PAKAPLLELDVQNEEHLASLA 75 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS----------SSCCCEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc----------CCCceEEEccCCCHHHHHHHH
Confidence 457898997 2444444 4444555 59999987643 34333322 2346788889876420
Q ss_pred C-----CC---cEEEEEccchhh-----------cCChhhHHH-----------HHHHHHHcCCCCcEEEEEec
Q 023562 227 E-----TG---RYDVIWVQWCIG-----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 227 ~-----~~---~fDlV~~~~~l~-----------~~~~~d~~~-----------~l~~~~r~LkpGG~lii~e~ 270 (280)
. .+ ++|+++.+-.+. ..+.+++.. +++.+...++++|.|++.-.
T Consensus 76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence 0 02 799998763322 233344433 34555666677788776543
No 483
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=59.76 E-value=43 Score=28.36 Aligned_cols=104 Identities=10% Similarity=0.008 Sum_probs=52.5
Q ss_pred CCccEEEeecCccH--HHHHHHHhcC-CcEEEEeCCHHHHHH-HHHHcCcCCCCCCCCCcceeEEEc-cCCCCCCCCCcE
Q 023562 157 QHLVALDCGSGIGR--ITKNLLIRYF-NEVDLLEPVSHFLDA-ARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRY 231 (280)
Q Consensus 157 ~~~~VLDlGcG~G~--~s~~l~~~~~-~~v~~vD~S~~~l~~-A~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~f 231 (280)
+..+|.=+|+|.=. ++..|+..+. .+|+++|.++..++. +........+ .....+... +.+.+ ..+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~----~~a 76 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-----YPTVSIDGSDDPEIC----RDA 76 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-----STTCEEEEESCGGGG----TTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhh-----cCCeEEEeCCCHHHh----CCC
Confidence 34689999997522 2333344443 269999999876652 2211000000 012223222 32221 357
Q ss_pred EEEEccchhhcCCh-----------hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 232 DVIWVQWCIGHLTD-----------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 232 DlV~~~~~l~~~~~-----------~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
|+|+..--....+. .-+..+++.+... .|+++++..-|
T Consensus 77 D~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~N 125 (319)
T 1lld_A 77 DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITN 125 (319)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecC
Confidence 99887642222110 1123567777664 78998877544
No 484
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=59.39 E-value=15 Score=30.86 Aligned_cols=73 Identities=12% Similarity=0.036 Sum_probs=49.7
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+...
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGG-------GGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTT-------TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 457888887665 24555566666 5999999998888777666542 3467888888876420
Q ss_pred --CCCcEEEEEccc
Q 023562 227 --ETGRYDVIWVQW 238 (280)
Q Consensus 227 --~~~~fDlV~~~~ 238 (280)
..++.|+++.+-
T Consensus 80 ~~~~g~iD~lvnnA 93 (280)
T 3tox_A 80 VRRFGGLDTAFNNA 93 (280)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 013689988763
No 485
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=58.86 E-value=35 Score=28.20 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=55.5
Q ss_pred CccEEEeecC-ccHHH----HHHHHhcCCcEEEEeCCHH---HHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC---
Q 023562 158 HLVALDCGSG-IGRIT----KNLLIRYFNEVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--- 226 (280)
Q Consensus 158 ~~~VLDlGcG-~G~~s----~~l~~~~~~~v~~vD~S~~---~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--- 226 (280)
++++|=.|++ +|.++ ..|++++. +|.+++.++. .++...+.. ..+.++.+|+.+...
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~-----------~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQEL-----------NSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHT-----------TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-----------CCcEEEEcCCCCHHHHHH
Confidence 4578888875 13333 33444455 5999998875 222222211 125678888876420
Q ss_pred -------CCCcEEEEEccchhh----------cCChhhHHH-----------HHHHHHHcCCCCcEEEEEec
Q 023562 227 -------ETGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 227 -------~~~~fDlV~~~~~l~----------~~~~~d~~~-----------~l~~~~r~LkpGG~lii~e~ 270 (280)
..++.|+++.+-.+. ..+.+++.. +++.+...|+++|.|++.-.
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 014789998764322 233333333 33455556666788776543
No 486
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=58.80 E-value=68 Score=26.29 Aligned_cols=75 Identities=16% Similarity=0.003 Sum_probs=44.9
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeC-CHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC----CC---
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TP--- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~-S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~--- 226 (280)
+.++|=.|++.| .++..|++++. +|.+++. ++..++...+.+... .+.++.++.+|+.+. ..
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~ 83 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAA------RAGSAVLCKGDLSLSSSLLDCCED 83 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHH------STTCEEEEECCCSSSTTHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHh------cCCceEEEeccCCCccccHHHHHH
Confidence 346777776554 23344455565 5999998 887776655444221 013477888898875 20
Q ss_pred --C-----CCcEEEEEccch
Q 023562 227 --E-----TGRYDVIWVQWC 239 (280)
Q Consensus 227 --~-----~~~fDlV~~~~~ 239 (280)
. .+..|+++.+-.
T Consensus 84 ~~~~~~~~~g~id~lv~nAg 103 (276)
T 1mxh_A 84 IIDCSFRAFGRCDVLVNNAS 103 (276)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHhcCCCCEEEECCC
Confidence 0 026799987643
No 487
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=58.77 E-value=19 Score=30.83 Aligned_cols=76 Identities=14% Similarity=0.103 Sum_probs=51.0
Q ss_pred CccEEEeecCccH---HHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC-----C---
Q 023562 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P--- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~--- 226 (280)
+.+||=.|++.|. ++..|+++++ +|.+++.++.-++.+.+.+...+. ..++.++.+|+.+.. .
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGS-----GPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEEECCCCCHHHHHHHHHHH
Confidence 4578888887663 4555666666 599999999888777665543211 236888999988742 0
Q ss_pred --CCCcEEEEEccch
Q 023562 227 --ETGRYDVIWVQWC 239 (280)
Q Consensus 227 --~~~~fDlV~~~~~ 239 (280)
..+..|+++.+-.
T Consensus 82 ~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 82 EARFGPVSILCNNAG 96 (319)
T ss_dssp HHHTCCEEEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 0147899997744
No 488
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=58.08 E-value=26 Score=28.80 Aligned_cols=73 Identities=16% Similarity=0.168 Sum_probs=46.9
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... +.++.++.+|+.+...
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREK-------GVEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTT-------TSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEecCCCHHHHHHHHHHH
Confidence 457887777655 23445555666 5999999988777665554332 2357788889876420
Q ss_pred --CCCcEEEEEccc
Q 023562 227 --ETGRYDVIWVQW 238 (280)
Q Consensus 227 --~~~~fDlV~~~~ 238 (280)
..+.+|+++.+-
T Consensus 79 ~~~~g~id~lv~nA 92 (262)
T 1zem_A 79 VRDFGKIDFLFNNA 92 (262)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 013689998763
No 489
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=57.44 E-value=8.6 Score=32.49 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=50.6
Q ss_pred ccEEEeecCcc--HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 159 LVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 159 ~~VLDlGcG~G--~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
.+|.=+|||.= .++..+...+. +|.++|.++..++..++. + +.. ..+..+. -...|+|+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g---------~~~-~~~~~~~---~~~~D~vi~ 67 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA----G---------AET-ASTAKAI---AEQCDVIIT 67 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----T---------CEE-CSSHHHH---HHHCSEEEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----C---------Cee-cCCHHHH---HhCCCEEEE
Confidence 47899999863 23444555555 599999999887766543 1 111 1111110 024688876
Q ss_pred cchhhcCChhhHHHHH---HHHHHcCCCCcEEEE
Q 023562 237 QWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVL 267 (280)
Q Consensus 237 ~~~l~~~~~~d~~~~l---~~~~r~LkpGG~lii 267 (280)
+-.- +.....++ +.+...++||..++.
T Consensus 68 ~v~~----~~~~~~~~~~~~~l~~~l~~~~~vv~ 97 (299)
T 1vpd_A 68 MLPN----SPHVKEVALGENGIIEGAKPGTVLID 97 (299)
T ss_dssp CCSS----HHHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred ECCC----HHHHHHHHhCcchHhhcCCCCCEEEE
Confidence 5331 12345566 567778888886654
No 490
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=57.22 E-value=24 Score=28.67 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=45.3
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C--
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~-- 227 (280)
+.+||=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+... .
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRME-------GHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHH
Confidence 457887776544 23344455565 5999999987766554444321 2357888899876420 0
Q ss_pred ---CCcEEEEEccc
Q 023562 228 ---TGRYDVIWVQW 238 (280)
Q Consensus 228 ---~~~fDlV~~~~ 238 (280)
.+++|+|+.+-
T Consensus 85 ~~~~~~id~vi~~A 98 (260)
T 3awd_A 85 HEQEGRVDILVACA 98 (260)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 03689988763
No 491
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=57.18 E-value=41 Score=24.15 Aligned_cols=88 Identities=11% Similarity=-0.040 Sum_probs=47.5
Q ss_pred ccEEEeecCccHHHHHHH----HhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCC----CCCCc
Q 023562 159 LVALDCGSGIGRITKNLL----IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (280)
Q Consensus 159 ~~VLDlGcG~G~~s~~l~----~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (280)
.+|+=+|+ |.++..++ +.+. .|+++|.++..++.+++. ...++.+|..+.. .....
T Consensus 7 ~~v~I~G~--G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~-------------~~~~~~~d~~~~~~l~~~~~~~ 70 (144)
T 2hmt_A 7 KQFAVIGL--GRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY-------------ATHAVIANATEENELLSLGIRN 70 (144)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTT-------------CSEEEECCTTCHHHHHTTTGGG
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh-------------CCEEEEeCCCCHHHHHhcCCCC
Confidence 47999997 55554443 3344 599999988765533211 1234556654321 11246
Q ss_pred EEEEEccchhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 023562 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (280)
Q Consensus 231 fDlV~~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (280)
+|+|+..-.-. .+....+....+.+.+. .+++
T Consensus 71 ~d~vi~~~~~~----~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 71 FEYVIVAIGAN----IQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp CSEEEECCCSC----HHHHHHHHHHHHHTTCS-EEEE
T ss_pred CCEEEECCCCc----hHHHHHHHHHHHHcCCC-eEEE
Confidence 88888653311 12223444555556775 5554
No 492
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=56.72 E-value=28 Score=28.97 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=48.0
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCC----------------HHHHHHHHHHcCcCCCCCCCCCcceeEE
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPV----------------SHFLDAARESLAPENHMAPDMHKATNFF 217 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S----------------~~~l~~A~~~~~~~~~~~~~~~~~i~~~ 217 (280)
.++++|=-|++.| .++..|++++. +|.++|.+ +..++...+.+... ..++.++
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 81 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-------NRRIVTA 81 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-------TCCEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-------CCceEEE
Confidence 3467888888766 24555666666 59999887 56666555544332 3468888
Q ss_pred EccCCCCCC----------CCCcEEEEEccc
Q 023562 218 CVPLQDFTP----------ETGRYDVIWVQW 238 (280)
Q Consensus 218 ~~d~~~~~~----------~~~~fDlV~~~~ 238 (280)
.+|+.+... ..++.|+++.+-
T Consensus 82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 999877420 013689998763
No 493
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=56.63 E-value=26 Score=29.14 Aligned_cols=76 Identities=16% Similarity=0.063 Sum_probs=49.3
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (280)
+++||=.|++.| .++..|++++. +|.+++.++..++.+.+.+...+. ...++.++.+|+.+...
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGA----NGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCC----SSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCC----CCceEEEEeCCCCCHHHHHHHHHHH
Confidence 457888887655 24555666666 599999999888777666544211 02368888999876420
Q ss_pred --CCCcEEEEEccc
Q 023562 227 --ETGRYDVIWVQW 238 (280)
Q Consensus 227 --~~~~fDlV~~~~ 238 (280)
..++.|+++.+-
T Consensus 86 ~~~~g~id~lv~nA 99 (281)
T 3svt_A 86 TAWHGRLHGVVHCA 99 (281)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 013679888663
No 494
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=56.60 E-value=25 Score=29.14 Aligned_cols=74 Identities=15% Similarity=0.077 Sum_probs=46.3
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC--------
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (280)
+.+||=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+...
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGL-------GAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhc-------CCeEEEEEeeCCCHHHHHHHHHHH
Confidence 457887776544 23334455565 5999999988777655544332 2357888899876420
Q ss_pred --CCCcEEEEEccch
Q 023562 227 --ETGRYDVIWVQWC 239 (280)
Q Consensus 227 --~~~~fDlV~~~~~ 239 (280)
..+.+|+|+.+-.
T Consensus 103 ~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 103 KAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHTCCCSEEEECCC
T ss_pred HHHCCCCcEEEECCC
Confidence 0136899887643
No 495
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=56.58 E-value=29 Score=28.86 Aligned_cols=74 Identities=18% Similarity=0.134 Sum_probs=48.5
Q ss_pred CCccEEEeecCccH---HHHHHHHhcCCcEEEEeC-------------CHHHHHHHHHHcCcCCCCCCCCCcceeEEEcc
Q 023562 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-------------VSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (280)
Q Consensus 157 ~~~~VLDlGcG~G~---~s~~l~~~~~~~v~~vD~-------------S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d 220 (280)
.++++|=.|++.|. ++..|++++. +|.++|. ++..++...+.+... ..++.++.+|
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D 85 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-------GRKALTRVLD 85 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-------TCCEEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhc-------CCeEEEEEcC
Confidence 34578888877662 4555666666 5999987 677777666555432 3467888899
Q ss_pred CCCCCC----------CCCcEEEEEccc
Q 023562 221 LQDFTP----------ETGRYDVIWVQW 238 (280)
Q Consensus 221 ~~~~~~----------~~~~fDlV~~~~ 238 (280)
+.+... ..++.|+++.+-
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 876420 013689998763
No 496
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=56.57 E-value=32 Score=29.17 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=41.4
Q ss_pred CCccEEEeecCc-c-HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEE
Q 023562 157 QHLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (280)
Q Consensus 157 ~~~~VLDlGcG~-G-~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV 234 (280)
.+.++|=+|+|. | .....|++.+..+|+.++.+++-.+...+.+... ..+.. .++.++. ..+|+|
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~--------~~~~~--~~~~~l~---~~aDiI 191 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY--------GEVKA--QAFEQLK---QSYDVI 191 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG--------SCEEE--EEGGGCC---SCEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc--------CCeeE--eeHHHhc---CCCCEE
Confidence 457899999862 1 1233344456667999999887665544444321 11222 2333332 578999
Q ss_pred Eccchhh
Q 023562 235 WVQWCIG 241 (280)
Q Consensus 235 ~~~~~l~ 241 (280)
+..-...
T Consensus 192 InaTp~g 198 (281)
T 3o8q_A 192 INSTSAS 198 (281)
T ss_dssp EECSCCC
T ss_pred EEcCcCC
Confidence 8765443
No 497
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=56.53 E-value=27 Score=28.46 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=46.8
Q ss_pred CccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C--
Q 023562 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (280)
Q Consensus 158 ~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~-- 227 (280)
++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+... .
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAA-------GAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHHH
Confidence 457888887655 23445555666 5999999988777665554321 2357788889876420 0
Q ss_pred ---CCcEEEEEccc
Q 023562 228 ---TGRYDVIWVQW 238 (280)
Q Consensus 228 ---~~~fDlV~~~~ 238 (280)
.+.+|+++.+-
T Consensus 79 ~~~~g~id~lv~nA 92 (247)
T 2jah_A 79 VEALGGLDILVNNA 92 (247)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13689988763
No 498
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=56.36 E-value=16 Score=30.54 Aligned_cols=75 Identities=13% Similarity=0.045 Sum_probs=49.5
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCC-----C-
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~- 227 (280)
.++++|=.|++.| .++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+... .
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGV-------GGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHHH
Confidence 3457888887665 24455566666 5999999988777766655432 3457888899887530 0
Q ss_pred ----CCcEEEEEccch
Q 023562 228 ----TGRYDVIWVQWC 239 (280)
Q Consensus 228 ----~~~fDlV~~~~~ 239 (280)
-++.|+++.+-.
T Consensus 103 ~~~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 103 MTGELGGIDIAVCNAG 118 (276)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 136899987633
No 499
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=55.92 E-value=25 Score=29.31 Aligned_cols=76 Identities=22% Similarity=0.162 Sum_probs=50.2
Q ss_pred CCccEEEeecCcc---HHHHHHHHhcCCcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCC-CC------
Q 023562 157 QHLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP------ 226 (280)
Q Consensus 157 ~~~~VLDlGcG~G---~~s~~l~~~~~~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~------ 226 (280)
.+.+||=.|++.| .++..|++++. +|.+++.++.-++.+.+.+...+ ..++.++.+|+.+. ..
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSN------HENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT------CCSEEEEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC------CCceEEEEccCCCcHHHHHHHHH
Confidence 3457888887655 24455566666 69999999888777666554321 24688999999875 20
Q ss_pred ----CCCcEEEEEccch
Q 023562 227 ----ETGRYDVIWVQWC 239 (280)
Q Consensus 227 ----~~~~fDlV~~~~~ 239 (280)
..++.|+++.+-.
T Consensus 84 ~~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHHSSCCEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 0137899987744
No 500
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=55.73 E-value=63 Score=27.41 Aligned_cols=103 Identities=13% Similarity=0.039 Sum_probs=54.0
Q ss_pred cEEEeecCccH--HHHHHHHhcC-CcEEEEeCCHHHHHHHHHHcCcCCCCCCCCCcceeEEEccCCCCCCCCCcEEEEEc
Q 023562 160 VALDCGSGIGR--ITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (280)
Q Consensus 160 ~VLDlGcG~G~--~s~~l~~~~~-~~v~~vD~S~~~l~~A~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fDlV~~ 236 (280)
+|.=+|+|.=. ++..|+..+. .+|+++|.++..++.....+.... . .....+.....|.+.+ ...|+|+.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~d~~~~----~~aDvVii 75 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM-A--NLEAHGNIVINDWAAL----ADADVVIS 75 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-G--GSSSCCEEEESCGGGG----TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh-h--hcCCCeEEEeCCHHHh----CCCCEEEE
Confidence 67888876532 3334455553 479999999887765543221100 0 0011233333443222 35788887
Q ss_pred cchhhcC----Ch-----------hhHHHHHHHHHHcCCCCcEEEEEec
Q 023562 237 QWCIGHL----TD-----------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (280)
Q Consensus 237 ~~~l~~~----~~-----------~d~~~~l~~~~r~LkpGG~lii~e~ 270 (280)
.--.... +. +-+..+++.+.+.. |++++++.-|
T Consensus 76 av~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tN 123 (309)
T 1hyh_A 76 TLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISN 123 (309)
T ss_dssp CCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSS
T ss_pred ecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcC
Confidence 6432221 10 01356677776654 7888877544
Done!