Your job contains 1 sequence.
>023563
MSTISRMKCLITPPFSLTPISLHLSKATTLASKSCFLNPATSLRNPKFIHSMVSPRPPLF
SLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY
GLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH
DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL
IGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKVQCGSYV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023563
(280 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178297 - symbol:TK1b "AT5G23070" species:3702... 762 1.3e-75 1
TAIR|locus:2077382 - symbol:TK1a "AT3G07800" species:3702... 709 5.5e-70 1
MGI|MGI:98763 - symbol:Tk1 "thymidine kinase 1" species:1... 361 4.1e-33 1
UNIPROTKB|P04047 - symbol:TK1 "Thymidine kinase, cytosoli... 356 1.4e-32 1
UNIPROTKB|P04183 - symbol:TK1 "Thymidine kinase, cytosoli... 354 2.3e-32 1
UNIPROTKB|A5D7R8 - symbol:TK1 "Thymidine kinase, cytosoli... 350 6.0e-32 1
UNIPROTKB|P09768 - symbol:TK1 "Thymidine kinase, cytosoli... 349 7.7e-32 1
UNIPROTKB|K7ERV3 - symbol:TK1 "Thymidine kinase" species:... 314 1.8e-31 2
DICTYBASE|DDB_G0289179 - symbol:thyB "calmodulin-binding ... 341 5.4e-31 1
ZFIN|ZDB-GENE-030131-5801 - symbol:tk1 "thymidine kinase ... 341 5.4e-31 1
UNIPROTKB|E2QXP4 - symbol:TK1 "Thymidine kinase" species:... 340 6.9e-31 1
UNIPROTKB|K7ERJ1 - symbol:TK1 "Thymidine kinase" species:... 334 3.0e-30 1
UNIPROTKB|K7ES52 - symbol:TK1 "Thymidine kinase" species:... 314 3.9e-28 1
WB|WBGene00006568 - symbol:thk-1 species:6239 "Caenorhabd... 311 8.2e-28 1
TIGR_CMR|BA_5573 - symbol:BA_5573 "thymidine kinase" spec... 248 3.9e-21 1
TIGR_CMR|CHY_0585 - symbol:CHY_0585 "thymidine kinase" sp... 215 1.2e-17 1
RGD|621014 - symbol:Tk1 "thymidine kinase 1, soluble" spe... 199 6.0e-16 1
UNIPROTKB|P23331 - symbol:tdk "thymidine kinase / deoxyur... 156 3.9e-11 1
TIGR_CMR|CPS_1971 - symbol:CPS_1971 "thymidine kinase" sp... 142 1.6e-09 1
UNIPROTKB|Q9KST9 - symbol:tdk "Thymidine kinase" species:... 141 2.0e-09 1
TIGR_CMR|VC_1167 - symbol:VC_1167 "thymidine kinase" spec... 141 2.0e-09 1
TIGR_CMR|CBU_2069 - symbol:CBU_2069 "thymidine kinases" s... 139 2.4e-08 1
TIGR_CMR|SPO_0914 - symbol:SPO_0914 "thymidine kinase" sp... 139 3.1e-08 1
UNIPROTKB|Q0BXG9 - symbol:tdk "Thymidine kinase" species:... 138 3.1e-08 1
UNIPROTKB|K7ENW5 - symbol:TK1 "Thymidine kinase" species:... 121 3.6e-07 1
TIGR_CMR|SO_3140 - symbol:SO_3140 "thymidine kinase" spec... 130 5.3e-07 1
>TAIR|locus:2178297 [details] [associations]
symbol:TK1b "AT5G23070" species:3702 "Arabidopsis
thaliana" [GO:0004797 "thymidine kinase activity" evidence=ISS;IDA]
[GO:0009165 "nucleotide biosynthetic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR001267
InterPro:IPR003593 InterPro:IPR020633 Pfam:PF00265 PROSITE:PS00603
SMART:SM00382 GO:GO:0005524 EMBL:CP002688 GO:GO:0006260
GO:GO:0017111 KO:K00857 GO:GO:0004797 PANTHER:PTHR11441
IPI:IPI00520568 RefSeq:NP_568426.1 UniGene:At.49050
UniGene:At.71128 ProteinModelPortal:F4KBF5 SMR:F4KBF5 PRIDE:F4KBF5
EnsemblPlants:AT5G23070.1 GeneID:832371 KEGG:ath:AT5G23070
OMA:ELICGSM Uniprot:F4KBF5
Length = 282
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 160/272 (58%), Positives = 200/272 (73%)
Query: 7 MKCLITPPFSLTPISLHLSKATTLASKSCF---LNPATSLRNPKFIHSMVSPRPPLFSLQ 63
M+ LI+P SL P SLHL K + ++ F +N T +P S +S R L +
Sbjct: 6 MRTLISP--SLAPFSLHLHKPSLFSTALRFSFSINNITPTNSPP---STISTRK-LQTKA 59
Query: 64 NRNLHSEAS--VSSPS-GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY 120
R S +S +SS S GEIHV+VGPMF+GKTTTLLRRI AE + G+ +A+IKSNKDTRY
Sbjct: 60 TRVTSSSSSQPLSSSSPGEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRY 119
Query: 121 GLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYD-QVDVIGIDEAQFFEDLYDFCREAAD 179
+SIVTHDG K PC +L LSSF+++FG D Y+ ++DVIGIDEAQFF DLY+FCREAAD
Sbjct: 120 CTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAAD 179
Query: 180 HDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXX 239
+GKTVIVAGLDGD++RR FGSV+D+IP+AD+VTKLT+RCE CGKRA FT+R
Sbjct: 180 KEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETE 239
Query: 240 LIGGSDIYMPVCRQHYVSGQVVVEAARIVLES 271
LIGG+++YMPVCR HYV GQ V+E AR VL+S
Sbjct: 240 LIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271
>TAIR|locus:2077382 [details] [associations]
symbol:TK1a "AT3G07800" species:3702 "Arabidopsis
thaliana" [GO:0004797 "thymidine kinase activity" evidence=ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA;ISS] InterPro:IPR001267
InterPro:IPR020633 Pfam:PF00265 PROSITE:PS00603 GO:GO:0005524
EMBL:CP002686 GO:GO:0006260 EMBL:AC013483 EMBL:AC009176 KO:K00857
GO:GO:0004797 PANTHER:PTHR11441 OMA:EFCEEMA BRENDA:2.7.1.21
EMBL:AF370344 EMBL:AY142670 IPI:IPI00532186 RefSeq:NP_187437.1
UniGene:At.18348 ProteinModelPortal:Q9S750 SMR:Q9S750 IntAct:Q9S750
STRING:Q9S750 EnsemblPlants:AT3G07800.1 GeneID:819971
KEGG:ath:AT3G07800 TAIR:At3g07800 InParanoid:Q9S750
PhylomeDB:Q9S750 ProtClustDB:CLSN2915575 ArrayExpress:Q9S750
Genevestigator:Q9S750 Uniprot:Q9S750
Length = 238
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 133/205 (64%), Positives = 167/205 (81%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG +HVI+GPMF+GK+T+LLRRI++E GR+VA++KS+KDTRY DS+VTHDG+ PC
Sbjct: 30 SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
AL L SF +KFG DAY+++DVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90 ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYMPVCRQHYV 256
RSFG+V+DIIP+ADSVTKLTARCE CG +AFFTLR LIGG+D+YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209
Query: 257 SGQVVVEAARIVLE-SQKVQCGSYV 280
+ +V++A++ VLE S K + S V
Sbjct: 210 TNHIVIKASKKVLEDSDKARAESCV 234
>MGI|MGI:98763 [details] [associations]
symbol:Tk1 "thymidine kinase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004797
"thymidine kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0009165 "nucleotide biosynthetic process"
evidence=IDA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046104 "thymidine
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=ISO] InterPro:IPR001267 InterPro:IPR020633 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 MGI:MGI:98763 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0006260 GO:GO:0008270
GO:GO:0051289 eggNOG:COG1435 HOGENOM:HOG000076390 KO:K00857
OMA:KVHAICV GO:GO:0004797 PANTHER:PTHR11441 CTD:7083
GeneTree:ENSGT00390000011309 HOVERGEN:HBG006215 OrthoDB:EOG4VHK7C
BRENDA:2.7.1.21 EMBL:M11945 EMBL:M19438 EMBL:M68489 EMBL:S57244
EMBL:AK085188 EMBL:AK087988 EMBL:AK139244 EMBL:BC012215
EMBL:BC091758 EMBL:X60980 EMBL:M22581 IPI:IPI00648094 PIR:JC1252
RefSeq:NP_033413.2 UniGene:Mm.2661 ProteinModelPortal:P04184
SMR:P04184 STRING:P04184 PhosphoSite:P04184 PRIDE:P04184
DNASU:21877 Ensembl:ENSMUST00000026661 GeneID:21877 KEGG:mmu:21877
InParanoid:P04184 SABIO-RK:P04184 BindingDB:P04184
ChEMBL:CHEMBL2618 NextBio:301386 Bgee:P04184 CleanEx:MM_TK1
Genevestigator:P04184 GermOnline:ENSMUSG00000025574 Uniprot:P04184
Length = 233
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 87/188 (46%), Positives = 115/188 (61%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 VK---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC A+ +GKTVIV
Sbjct: 71 NTMDALPACMLRDVT--QESLG------VAVIGIDEGQFFPDIVDFCEMMAN-EGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R +IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>UNIPROTKB|P04047 [details] [associations]
symbol:TK1 "Thymidine kinase, cytosolic" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0004797 "thymidine kinase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051289 "protein homotetramerization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISS] InterPro:IPR001267
InterPro:IPR020633 Pfam:PF00265 PIRSF:PIRSF035805 PROSITE:PS00603
GO:GO:0005524 GO:GO:0005737 GO:GO:0046872 GO:GO:0006260
GO:GO:0008270 GO:GO:0051289 eggNOG:COG1435 HOGENOM:HOG000076390
KO:K00857 GO:GO:0004797 PANTHER:PTHR11441 CTD:7083
GeneTree:ENSGT00390000011309 HOVERGEN:HBG006215 OrthoDB:EOG4VHK7C
EMBL:K02611 IPI:IPI00585035 PIR:A00608 RefSeq:NP_990229.1
UniGene:Gga.421 ProteinModelPortal:P04047 SMR:P04047 STRING:P04047
Ensembl:ENSGALT00000011644 GeneID:395719 KEGG:gga:395719
InParanoid:P04047 OMA:EFCEEMA BRENDA:2.7.1.21 NextBio:20815789
Uniprot:P04047
Length = 224
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 80/187 (42%), Positives = 111/187 (59%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S P G+I VI GPMF+GK+T L+RR++ ++K KDTRY + THD
Sbjct: 13 SPGRPRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDRN 72
Query: 132 KL---PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
+ P CAL + +++ GS VIGIDE QFF D+ +FC + A+ GKTVIVA
Sbjct: 73 TMEARPACALQDV--YQEALGSA------VIGIDEGQFFPDIVEFCEKMAN-TGKTVIVA 123
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYM 248
LDG + R++FGS+++++PLA+SV KL A C C + A +T R +IGG+D Y
Sbjct: 124 ALDGTFQRKAFGSILNLVPLAESVVKLNAVCMECYREASYTKRLGAEREVEVIGGADKYH 183
Query: 249 PVCRQHY 255
VCR Y
Sbjct: 184 SVCRACY 190
>UNIPROTKB|P04183 [details] [associations]
symbol:TK1 "Thymidine kinase, cytosolic" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0004797 "thymidine kinase activity"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0014856
"skeletal muscle cell proliferation" evidence=IEA] [GO:0031667
"response to nutrient levels" evidence=IEA] [GO:0046104 "thymidine
metabolic process" evidence=IEA] [GO:0046688 "response to copper
ion" evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0060138 "fetal process involved in parturition"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IPI] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006206
"pyrimidine nucleobase metabolic process" evidence=TAS] [GO:0019206
"nucleoside kinase activity" evidence=EXP] [GO:0043097 "pyrimidine
nucleoside salvage" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS] [GO:0009165
"nucleotide biosynthetic process" evidence=EXP]
Reactome:REACT_111217 InterPro:IPR001267 InterPro:IPR020633
Pfam:PF00265 PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 GO:GO:0006260 GO:GO:0006206
GO:GO:0008270 GO:GO:0051289 GO:GO:0043097 eggNOG:COG1435
HOGENOM:HOG000076390 KO:K00857 OMA:KVHAICV GO:GO:0004797
PANTHER:PTHR11441 CTD:7083 HOVERGEN:HBG006215 OrthoDB:EOG4VHK7C
BRENDA:2.7.1.21 EMBL:K02581 EMBL:M15205 EMBL:AK314950 EMBL:BT006941
EMBL:BC006484 EMBL:BC007872 EMBL:BC007986 EMBL:M13643
IPI:IPI00299214 PIR:A27318 RefSeq:NP_003249.3 UniGene:Hs.515122
PDB:1W4R PDB:1XBT PDB:2ORV PDB:2WVJ PDBsum:1W4R PDBsum:1XBT
PDBsum:2ORV PDBsum:2WVJ ProteinModelPortal:P04183 SMR:P04183
IntAct:P04183 MINT:MINT-200463 STRING:P04183 PhosphoSite:P04183
DMDM:23503074 PaxDb:P04183 PeptideAtlas:P04183 PRIDE:P04183
DNASU:7083 Ensembl:ENST00000301634 Ensembl:ENST00000405273
GeneID:7083 KEGG:hsa:7083 UCSC:uc002juw.2 GeneCards:GC17M076170
HGNC:HGNC:11830 HPA:CAB004683 MIM:188300 neXtProt:NX_P04183
PharmGKB:PA352 InParanoid:P04183 PhylomeDB:P04183 SABIO-RK:P04183
BindingDB:P04183 ChEMBL:CHEMBL2883 ChiTaRS:TK1
EvolutionaryTrace:P04183 GenomeRNAi:7083 NextBio:27705 Bgee:P04183
CleanEx:HS_TK1 Genevestigator:P04183 GermOnline:ENSG00000167900
Uniprot:P04183
Length = 234
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 87/194 (44%), Positives = 114/194 (58%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG- 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDRN 71
Query: 131 --VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIVA
Sbjct: 72 TMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYM 248
LDG + R+ FG++++++PLA+SV KLTA C C + A +T R +IGG+D Y
Sbjct: 123 ALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYH 182
Query: 249 PVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 183 SVCRLCYFKKASGQ 196
>UNIPROTKB|A5D7R8 [details] [associations]
symbol:TK1 "Thymidine kinase, cytosolic" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0004797 "thymidine kinase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001267 InterPro:IPR020633
Pfam:PF00265 PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0006260 GO:GO:0008270
GO:GO:0051289 eggNOG:COG1435 HOGENOM:HOG000076390 KO:K00857
OMA:KVHAICV GO:GO:0004797 PANTHER:PTHR11441 EMBL:BT030694
EMBL:BC140658 IPI:IPI00695261 RefSeq:NP_001091041.1 UniGene:Bt.964
ProteinModelPortal:A5D7R8 SMR:A5D7R8 STRING:A5D7R8 PRIDE:A5D7R8
Ensembl:ENSBTAT00000034713 GeneID:504652 KEGG:bta:504652 CTD:7083
GeneTree:ENSGT00390000011309 HOVERGEN:HBG006215 InParanoid:A5D7R8
OrthoDB:EOG4VHK7C NextBio:20866774 Uniprot:A5D7R8
Length = 238
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 87/197 (44%), Positives = 113/197 (57%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG- 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SLFSTHDRN 71
Query: 131 --VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L + DA +V VIGIDE QFF D+ +FC A+ GKTVIVA
Sbjct: 72 TMEALPACLLRDVIQ-------DA-QRVAVIGIDEGQFFPDIVEFCENMAN-SGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYM 248
LDG + R++FG++++++PLA+SV KLTA C C + A +T R +IGG+D Y
Sbjct: 123 ALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGVEKEVEVIGGADKYH 182
Query: 249 PVCRQHY---VSGQVVV 262
VCR Y SGQ V
Sbjct: 183 SVCRLCYFKKASGQPAV 199
>UNIPROTKB|P09768 [details] [associations]
symbol:TK1 "Thymidine kinase, cytosolic" species:10029
"Cricetulus griseus" [GO:0008270 "zinc ion binding" evidence=ISS]
InterPro:IPR001267 InterPro:IPR020633 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 GO:GO:0006260 GO:GO:0008270 GO:GO:0004797
PANTHER:PTHR11441 CTD:7083 HOVERGEN:HBG006215 EMBL:L00369
EMBL:L00364 EMBL:L00365 EMBL:L00366 EMBL:L00367 EMBL:L00368
PIR:A25243 RefSeq:NP_001231423.1 ProteinModelPortal:P09768
SMR:P09768 PRIDE:P09768 GeneID:100689285 Uniprot:P09768
Length = 234
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 83/187 (44%), Positives = 111/187 (59%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQNKCLVIKYAKDTRYS-SSFSTHDRN 71
Query: 132 K---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ ++ G+ VIGIDE QFF D+ +FC E + GKTVIVA
Sbjct: 72 TMDALPACLLRDVA--QEALGAA------VIGIDEGQFFPDIVEFC-EVMANAGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYM 248
LDG + R++FGS+++++PLA+SV KLTA C C + A +T R +IGG+D Y
Sbjct: 123 ALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKYH 182
Query: 249 PVCRQHY 255
VCR Y
Sbjct: 183 SVCRVCY 189
>UNIPROTKB|K7ERV3 [details] [associations]
symbol:TK1 "Thymidine kinase" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0004797 "thymidine kinase activity"
evidence=IEA] InterPro:IPR001267 InterPro:IPR020633 Pfam:PF00265
PROSITE:PS00603 EMBL:AC087645 EMBL:AC021593 PANTHER:PTHR11441
HGNC:HGNC:11830 Ensembl:ENST00000588734 Uniprot:K7ERV3
Length = 267
Score = 314 (115.6 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 75/163 (46%), Positives = 100/163 (61%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG- 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDRN 71
Query: 131 --VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIVA
Sbjct: 72 TMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR 231
LDG + R+ FG++++++PLA+SV KLTA C C + A +T R
Sbjct: 123 ALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKR 165
Score = 47 (21.6 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 240 LIGGSDIYMPVCRQHY---VSGQ 259
+IGG+D Y VCR Y SGQ
Sbjct: 207 VIGGADKYHSVCRLCYFKKASGQ 229
>DICTYBASE|DDB_G0289179 [details] [associations]
symbol:thyB "calmodulin-binding protein"
species:44689 "Dictyostelium discoideum" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IDA]
[GO:0004797 "thymidine kinase activity" evidence=IEA;IDA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005516 "calmodulin
binding" evidence=IEA;IPI] [GO:0004683 "calmodulin-dependent
protein kinase activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001267 InterPro:IPR020633 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 dictyBase:DDB_G0289179
GO:GO:0005524 GO:GO:0046872 GO:GO:0006260 GenomeReviews:CM000154_GR
EMBL:AAFI02000131 GO:GO:0004683 eggNOG:COG1435 KO:K00857
OMA:KVHAICV GO:GO:0004797 PANTHER:PTHR11441 BRENDA:2.7.1.21
EMBL:AY192984 EMBL:AF510846 EMBL:U61990 RefSeq:XP_636351.1
HSSP:P04183 ProteinModelPortal:Q27564 SMR:Q27564 STRING:Q27564
EnsemblProtists:DDB0191436 GeneID:8627024 KEGG:ddi:DDB_G0289179
ProtClustDB:PTZ00293 SABIO-RK:Q27564 Uniprot:Q27564
Length = 227
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 84/194 (43%), Positives = 109/194 (56%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG--LDS--IVTH 128
V+ +G+I VI GPMF+GKTT L+RRI+ + +IK +KDTRY +D +VTH
Sbjct: 3 VTQIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTH 62
Query: 129 DGVK---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
D PC L + Q + DVIGIDE QFF D+ F + A+ GKTV
Sbjct: 63 DKQNYQAFPCSILEDVKEQAQNY--------DVIGIDEGQFFPDVVQFSEDLANQ-GKTV 113
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSD 245
I+A LDG + R+ F SVID++ A+ +TKLTA C C A F+ R LIGG D
Sbjct: 114 IIAALDGTFQRKPFQSVIDLVSKAEYITKLTAVCMVCYNEAAFSKRIVESDDIELIGGID 173
Query: 246 IYMPVCRQHYVSGQ 259
Y+ VCR Y S Q
Sbjct: 174 KYISVCRGCYNSDQ 187
>ZFIN|ZDB-GENE-030131-5801 [details] [associations]
symbol:tk1 "thymidine kinase 1, soluble"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004797 "thymidine kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
InterPro:IPR001267 InterPro:IPR020633 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 ZFIN:ZDB-GENE-030131-5801
GO:GO:0005524 GO:GO:0006260 EMBL:CR293511 GO:GO:0004797
PANTHER:PTHR11441 GeneTree:ENSGT00390000011309 IPI:IPI00504414
Ensembl:ENSDART00000139922 ArrayExpress:F1Q5P1 Bgee:F1Q5P1
Uniprot:F1Q5P1
Length = 236
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 76/179 (42%), Positives = 106/179 (59%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC- 136
G+I VI GPMF+GK+T L+RR++ + +IK KDTRY + THD +
Sbjct: 19 GQIQVIFGPMFSGKSTELMRRVRRFQVAQYSCLLIKYAKDTRYSCTGMATHDMYEQEIVN 78
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + R + + Q VIGIDE QFF D +FC E A+ GKT+IVA LDG + R
Sbjct: 79 TMEAVPANRLRDVAPLALQACVIGIDEGQFFPDTVEFCEEMANM-GKTIIVAALDGTFQR 137
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYMPVCRQHY 255
++FG++++++PLA+SV KL A C C K A +T R +IGGSD Y VCR Y
Sbjct: 138 KAFGNILNLVPLAESVVKLNAVCMQCFKEAAYTKRLGAEKEVEVIGGSDKYHAVCRCCY 196
>UNIPROTKB|E2QXP4 [details] [associations]
symbol:TK1 "Thymidine kinase" species:9615 "Canis lupus
familiaris" [GO:0051289 "protein homotetramerization" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004797 "thymidine
kinase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001267 InterPro:IPR020633 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524 GO:GO:0006260
GO:GO:0008270 GO:GO:0051289 KO:K00857 OMA:KVHAICV GO:GO:0004797
PANTHER:PTHR11441 GeneTree:ENSGT00390000011309 EMBL:AAEX03006245
RefSeq:XP_003639284.1 ProteinModelPortal:E2QXP4
Ensembl:ENSCAFT00000008537 GeneID:100855947 KEGG:cfa:100855947
NextBio:20857754 Uniprot:E2QXP4
Length = 242
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 82/187 (43%), Positives = 111/187 (59%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG- 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRN 71
Query: 131 --VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ ++ G V VIGIDE QFF D+ +F A+ GKTVIVA
Sbjct: 72 TMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFSETMANA-GKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYM 248
LDG + R++FG++++++PLA+SV KLTA C C + A +T R +IGG+D Y
Sbjct: 123 ALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGSEKEVEVIGGADKYH 182
Query: 249 PVCRQHY 255
VCR Y
Sbjct: 183 SVCRLCY 189
>UNIPROTKB|K7ERJ1 [details] [associations]
symbol:TK1 "Thymidine kinase" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0004797 "thymidine kinase activity"
evidence=IEA] InterPro:IPR001267 Pfam:PF00265 PIRSF:PIRSF035805
EMBL:AC087645 EMBL:AC021593 PANTHER:PTHR11441 HGNC:HGNC:11830
Ensembl:ENST00000586613 Uniprot:K7ERJ1
Length = 187
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 77/177 (43%), Positives = 104/177 (58%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDRT 71
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQ---VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
+ A T+ + D + V VIGIDE QFF D+ +FC EA + GKTVIVA
Sbjct: 72 RSRIIARNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVA 130
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSD 245
LDG + R+ FG++++++PLA+SV KLTA C C + A +T R +IGG+D
Sbjct: 131 ALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGAD 187
>UNIPROTKB|K7ES52 [details] [associations]
symbol:TK1 "Thymidine kinase" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0004797 "thymidine kinase activity"
evidence=IEA] InterPro:IPR001267 Pfam:PF00265 PIRSF:PIRSF035805
EMBL:AC087645 EMBL:AC021593 PANTHER:PTHR11441 HGNC:HGNC:11830
Ensembl:ENST00000590862 Uniprot:K7ES52
Length = 180
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 75/163 (46%), Positives = 100/163 (61%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG- 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDRN 71
Query: 131 --VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIVA
Sbjct: 72 TMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR 231
LDG + R+ FG++++++PLA+SV KLTA C C + A +T R
Sbjct: 123 ALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKR 165
>WB|WBGene00006568 [details] [associations]
symbol:thk-1 species:6239 "Caenorhabditis elegans"
[GO:0004797 "thymidine kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR001267
InterPro:IPR020633 Pfam:PF00265 PROSITE:PS00603 GO:GO:0005524
GO:GO:0009792 GO:GO:0006260 KO:K00857 OMA:KVHAICV GO:GO:0004797
PANTHER:PTHR11441 GeneTree:ENSGT00390000011309 EMBL:AL023838
UniGene:Cel.5033 GeneID:177913 KEGG:cel:CELE_Y43C5A.5 CTD:177913
EMBL:AY523517 PIR:T26823 RefSeq:NP_001255477.1
ProteinModelPortal:G5EEZ5 SMR:G5EEZ5 EnsemblMetazoa:Y43C5A.5a
WormBase:Y43C5A.5a NextBio:898912 Uniprot:G5EEZ5
Length = 269
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 71/180 (39%), Positives = 99/180 (55%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI+GPMF+GKTT LLR + R ++K DTRY D + TH K+
Sbjct: 33 GSITVILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQG 90
Query: 138 LTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + + S + D+V V+ IDE QFFEDL + C E A GK V VA L+G + R
Sbjct: 91 RTVKAHRLSEVQSQIFNDEVQVVSIDEGQFFEDLAETCEELAQR-GKVVCVAALNGTFER 149
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYMPVCRQHYV 256
+ F + ++P A+ + ++TA C CG +A F+ R +IGGSD Y +CR+ YV
Sbjct: 150 KPFPQISLLLPYANEIKQVTAVCVECGSQANFSFRSTLDKKVEVIGGSDTYTALCRECYV 209
>TIGR_CMR|BA_5573 [details] [associations]
symbol:BA_5573 "thymidine kinase" species:198094 "Bacillus
anthracis str. Ames" [GO:0004797 "thymidine kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] HAMAP:MF_00124 InterPro:IPR001267
InterPro:IPR020633 InterPro:IPR020634 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006260 RefSeq:NP_847730.1
RefSeq:YP_022241.1 RefSeq:YP_031418.1 PDB:2J9R PDBsum:2J9R
ProteinModelPortal:Q81JX0 SMR:Q81JX0 IntAct:Q81JX0 DNASU:1085264
EnsemblBacteria:EBBACT00000012235 EnsemblBacteria:EBBACT00000014644
EnsemblBacteria:EBBACT00000022910 GeneID:1085264 GeneID:2819897
GeneID:2851937 KEGG:ban:BA_5573 KEGG:bar:GBAA_5573 KEGG:bat:BAS5179
eggNOG:COG1435 HOGENOM:HOG000076390 KO:K00857 OMA:KVHAICV
ProtClustDB:PRK04296 BioCyc:BANT260799:GJAJ-5254-MONOMER
BioCyc:BANT261594:GJ7F-5433-MONOMER EvolutionaryTrace:Q81JX0
GO:GO:0004797 PANTHER:PTHR11441 Uniprot:Q81JX0
Length = 194
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 69/189 (36%), Positives = 102/189 (53%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVI-KSNKDTRYGLDSIVTHDGVKLPC 135
+G I VI G MF+GK+ L+RR++ TQ + A++ K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVR-RTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA 65
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDY 194
+S+ + F +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 ---VPVSASKDIF-KHITEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDF 120
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXX------LIGGSDIYM 248
FG V ++ +A+ VTKL A C CG A T R L+G S+ Y
Sbjct: 121 RGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYE 180
Query: 249 PVCRQ-HYV 256
P CR H V
Sbjct: 181 PRCRHCHAV 189
>TIGR_CMR|CHY_0585 [details] [associations]
symbol:CHY_0585 "thymidine kinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004797 "thymidine
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] HAMAP:MF_00124
InterPro:IPR001267 InterPro:IPR020634 Pfam:PF00265
PIRSF:PIRSF035805 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006260 GO:GO:0008270
eggNOG:COG1435 HOGENOM:HOG000076390 KO:K00857 OMA:KVHAICV
GO:GO:0004797 PANTHER:PTHR11441 RefSeq:YP_359441.1
ProteinModelPortal:Q3AEJ3 STRING:Q3AEJ3 GeneID:3727004
KEGG:chy:CHY_0585 PATRIC:21274311
BioCyc:CHYD246194:GJCN-585-MONOMER Uniprot:Q3AEJ3
Length = 183
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 59/179 (32%), Positives = 84/179 (46%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L+RR + V D R+G IV+ G +L
Sbjct: 2 GRIEVITGPMFSGKSEELVRRALRLMYAKKKVIAFHHALDNRFGHKKIVSRSGFELESYP 61
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ +F + D D + +DEAQFF D L D C K V+V+GLD D
Sbjct: 62 V---QNFAFEVIWDLAKDYDAVLVDEAQFFSDELVDTCLNLRRRS-KIVVVSGLDLDVYE 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIGGSDIYMPVCRQHY 255
FG + ++ LAD V KL A C CG+ A + R ++G + Y+ +C + Y
Sbjct: 118 NPFGPMPKLLALADRVDKLKAVCFECGEEATISYRLSGEKEQIVVGDKN-YIALCYRCY 175
>RGD|621014 [details] [associations]
symbol:Tk1 "thymidine kinase 1, soluble" species:10116 "Rattus
norvegicus" [GO:0001889 "liver development" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004797
"thymidine kinase activity" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0009165 "nucleotide biosynthetic
process" evidence=ISO] [GO:0009636 "response to toxic substance"
evidence=IEP] [GO:0014856 "skeletal muscle cell proliferation"
evidence=IEP] [GO:0016310 "phosphorylation" evidence=ISO]
[GO:0019206 "nucleoside kinase activity" evidence=ISO] [GO:0031667
"response to nutrient levels" evidence=IEP] [GO:0046104 "thymidine
metabolic process" evidence=IDA] [GO:0046688 "response to copper
ion" evidence=IEP] [GO:0048565 "digestive tract development"
evidence=IEP] [GO:0051289 "protein homotetramerization"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0060138 "fetal process involved in parturition"
evidence=IEP] InterPro:IPR001267 Pfam:PF00265 PROSITE:PS00603
RGD:621014 GO:GO:0005524 GO:GO:0005737 GO:GO:0006260 GO:GO:0009636
GO:GO:0008270 GO:GO:0001889 GO:GO:0046688 GO:GO:0031667
GO:GO:0048565 KO:K00857 GO:GO:0004797 PANTHER:PTHR11441 CTD:7083
HOVERGEN:HBG006215 EMBL:M22642 EMBL:Y17296 EMBL:X54173
IPI:IPI00194130 PIR:A39968 RefSeq:NP_434687.1 UniGene:Rn.147549
UniGene:Rn.195325 UniGene:Rn.216486 ProteinModelPortal:P27158
SMR:P27158 PRIDE:P27158 GeneID:24834 KEGG:rno:24834 SABIO-RK:P27158
BindingDB:P27158 ChEMBL:CHEMBL4022 NextBio:604568
Genevestigator:P27158 GO:GO:0060138 GO:GO:0051414 GO:GO:0014856
GO:GO:0046104 Uniprot:P27158
Length = 121
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 54/119 (45%), Positives = 68/119 (57%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRN 71
Query: 132 K---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC A+ GKTVIV
Sbjct: 72 TMDALPACMLKDVA--QEALG------VAVIGIDEGQFFPDIVDFCETMAN-TGKTVIV 121
>UNIPROTKB|P23331 [details] [associations]
symbol:tdk "thymidine kinase / deoxyuridine kinase"
species:83333 "Escherichia coli K-12" [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004797 "thymidine kinase
activity" evidence=IEA] HAMAP:MF_00124 InterPro:IPR001267
InterPro:IPR020633 InterPro:IPR020634 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006260 EMBL:X67326
eggNOG:COG1435 KO:K00857 ProtClustDB:PRK04296 GO:GO:0004797
PANTHER:PTHR11441 HOGENOM:HOG000076391 OMA:FRYGAMN EMBL:X51523
EMBL:X53733 EMBL:DQ384607 PIR:JS0519 RefSeq:NP_415754.1
RefSeq:YP_489506.1 ProteinModelPortal:P23331 SMR:P23331
IntAct:P23331 EnsemblBacteria:EBESCT00000000834
EnsemblBacteria:EBESCT00000015522 GeneID:12930562 GeneID:945834
KEGG:ecj:Y75_p1211 KEGG:eco:b1238 PATRIC:32117732 EchoBASE:EB0987
EcoGene:EG10994 BioCyc:EcoCyc:TDK-MONOMER
BioCyc:ECOL316407:JW1226-MONOMER BioCyc:MetaCyc:TDK-MONOMER
Genevestigator:P23331 Uniprot:P23331
Length = 205
Score = 156 (60.0 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 49/187 (26%), Positives = 84/187 (44%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
+++ M AGK+T LL+ ++G V + D R+G + + G+ P
Sbjct: 3 QLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLF 62
Query: 139 TTLSSFRQKFGSDAYDQ-VDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYL 195
SS + ++ Q + + +DE QF + +Y+ E D V+ GL D+
Sbjct: 63 NQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELS-EVVDQLDIPVLCYGLRTDFR 121
Query: 196 RRSF-GSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXX------XXLIGGSDIYM 248
F GS ++ +D + +L C FCG++A LR +IGG++ Y+
Sbjct: 122 GELFIGSQY-LLAWSDKLVELKTIC-FCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYV 179
Query: 249 PVCRQHY 255
VCR+HY
Sbjct: 180 SVCRKHY 186
>TIGR_CMR|CPS_1971 [details] [associations]
symbol:CPS_1971 "thymidine kinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004797 "thymidine kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] HAMAP:MF_00124
InterPro:IPR001267 InterPro:IPR020633 InterPro:IPR020634
Pfam:PF00265 PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0006260 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG1435 KO:K00857
ProtClustDB:PRK04296 GO:GO:0004797 PANTHER:PTHR11441
RefSeq:YP_268701.1 ProteinModelPortal:Q483R5 STRING:Q483R5
GeneID:3520002 KEGG:cps:CPS_1971 PATRIC:21467073
HOGENOM:HOG000076391 OMA:FRYGAMN
BioCyc:CPSY167879:GI48-2041-MONOMER Uniprot:Q483R5
Length = 192
Score = 142 (55.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 42/185 (22%), Positives = 81/185 (43%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
+++ M AGK+T LL+ ++G A+ + D R+ + + G+
Sbjct: 3 QLYFYYSSMNAGKSTHLLQSSYNYQERGLVTAIYTAKIDDRFAKGKVASRLGIDADAFLF 62
Query: 139 TT-LSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ F+ +++D + IDEAQF + + D V+ G+ D+L
Sbjct: 63 DEKINLFKDVDQKHQAEKIDCVLIDEAQFLSTEQVKQLTDIVDLLHIPVLAYGIRTDFLG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXL------IGGSDIYMPV 250
++F ++ AD + +L C CG++A F +R +GG++ Y P+
Sbjct: 123 QTFSGSAALLAWADKLVELKTICH-CGRKANFVIRQDANGKAVQNGEQVEVGGNERYEPL 181
Query: 251 CRQHY 255
CR H+
Sbjct: 182 CRAHF 186
>UNIPROTKB|Q9KST9 [details] [associations]
symbol:tdk "Thymidine kinase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004797 "thymidine
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] HAMAP:MF_00124
InterPro:IPR001267 InterPro:IPR020633 InterPro:IPR020634
Pfam:PF00265 PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0006260 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0015949 eggNOG:COG1435 KO:K00857
ProtClustDB:PRK04296 GO:GO:0004797 PANTHER:PTHR11441 OMA:FRYGAMN
PIR:B82232 RefSeq:NP_230812.1 ProteinModelPortal:Q9KST9
DNASU:2614600 GeneID:2614600 KEGG:vch:VC1167 PATRIC:20081426
Uniprot:Q9KST9
Length = 192
Score = 141 (54.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 48/186 (25%), Positives = 79/186 (42%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
+++ M AGK+TTLL+ ++G N + + D R+G+ + + G++
Sbjct: 3 QMYFYYSAMNAGKSTTLLQSAFNYQERGMNPLIFTAAIDDRFGVGKVSSRIGLEAEAHLF 62
Query: 139 TTLSSFRQKFGS-DAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + I +DE QF E +Y E D V+ GL D+L
Sbjct: 63 HADTDLLHVIATLHEAEPRHCILMDECQFLSKEQVYQLT-EVVDKLDIPVLCYGLRTDFL 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXX------LIGGSDIYMP 249
F ++ AD + +L C CG++A +R IGG+D Y+
Sbjct: 122 GELFEGSKYLLSWADKLIELKTICH-CGRKANMVIRTDEHGNAISEGDQVAIGGNDKYVS 180
Query: 250 VCRQHY 255
VCRQHY
Sbjct: 181 VCRQHY 186
>TIGR_CMR|VC_1167 [details] [associations]
symbol:VC_1167 "thymidine kinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004797 "thymidine kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] HAMAP:MF_00124 InterPro:IPR001267
InterPro:IPR020633 InterPro:IPR020634 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0015949 eggNOG:COG1435 KO:K00857 ProtClustDB:PRK04296
GO:GO:0004797 PANTHER:PTHR11441 OMA:FRYGAMN PIR:B82232
RefSeq:NP_230812.1 ProteinModelPortal:Q9KST9 DNASU:2614600
GeneID:2614600 KEGG:vch:VC1167 PATRIC:20081426 Uniprot:Q9KST9
Length = 192
Score = 141 (54.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 48/186 (25%), Positives = 79/186 (42%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
+++ M AGK+TTLL+ ++G N + + D R+G+ + + G++
Sbjct: 3 QMYFYYSAMNAGKSTTLLQSAFNYQERGMNPLIFTAAIDDRFGVGKVSSRIGLEAEAHLF 62
Query: 139 TTLSSFRQKFGS-DAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + I +DE QF E +Y E D V+ GL D+L
Sbjct: 63 HADTDLLHVIATLHEAEPRHCILMDECQFLSKEQVYQLT-EVVDKLDIPVLCYGLRTDFL 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXX------LIGGSDIYMP 249
F ++ AD + +L C CG++A +R IGG+D Y+
Sbjct: 122 GELFEGSKYLLSWADKLIELKTICH-CGRKANMVIRTDEHGNAISEGDQVAIGGNDKYVS 180
Query: 250 VCRQHY 255
VCRQHY
Sbjct: 181 VCRQHY 186
>TIGR_CMR|CBU_2069 [details] [associations]
symbol:CBU_2069 "thymidine kinases" species:227377
"Coxiella burnetii RSA 493" [GO:0004797 "thymidine kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] HAMAP:MF_00124 InterPro:IPR001267
InterPro:IPR020633 InterPro:IPR020634 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 GO:GO:0006260 EMBL:AE016828 GenomeReviews:AE016828_GR
eggNOG:COG1435 KO:K00857 ProtClustDB:PRK04296 GO:GO:0004797
PANTHER:PTHR11441 HOGENOM:HOG000076391 OMA:FRYGAMN
RefSeq:NP_821039.1 ProteinModelPortal:Q83A42 GeneID:1209982
KEGG:cbu:CBU_2069 PATRIC:17932885
BioCyc:CBUR227377:GJ7S-2035-MONOMER Uniprot:Q83A42
Length = 196
Score = 139 (54.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/190 (24%), Positives = 80/190 (42%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
++H M AGK+TTLL+ ++G + V D R G I T G+ AL
Sbjct: 3 KLHFYYSAMNAGKSTTLLQSSYNYNERGMDTLVFLPVVDDREGERKIATRIGLSGKTIAL 62
Query: 139 TTLSSFRQKFGSDAYDQVDV--IGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
T ++ + + ++ + +DEAQF + + D V+ G+ D+
Sbjct: 63 TKDTNLFKCISDKLAENPNIRCVLVDEAQFLTKSQVEALALVTDELNLPVLAYGIRTDFQ 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXX------XXLIGGSDIYMP 249
F + ++ AD + ++ C CG++A LR +GG+D Y
Sbjct: 123 GEPFEGSVYLLAWADLLIEIKTICH-CGRKATMNLRIDDEGNPIREGEQIRLGGNDRYTA 181
Query: 250 VCRQHYVSGQ 259
CR+H+ GQ
Sbjct: 182 TCRKHFRLGQ 191
>TIGR_CMR|SPO_0914 [details] [associations]
symbol:SPO_0914 "thymidine kinase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004797 "thymidine kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] HAMAP:MF_00124 InterPro:IPR001267
InterPro:IPR020633 InterPro:IPR020634 Pfam:PF00265
PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0006260
eggNOG:COG1435 KO:K00857 ProtClustDB:PRK04296 GO:GO:0004797
PANTHER:PTHR11441 HOGENOM:HOG000076391 OMA:FRYGAMN
RefSeq:YP_166167.1 ProteinModelPortal:Q5LUY8 DNASU:3195435
GeneID:3195435 KEGG:sil:SPO0914 PATRIC:23375117 Uniprot:Q5LUY8
Length = 198
Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT----TLS 142
M AGK+T LL+ ++G ++ + D R G I + G+ T +
Sbjct: 11 MNAGKSTVLLQASHNYRERGMQTYLMTAAIDGRAGTGRIASRIGIGAEADIFTPRDDVFA 70
Query: 143 SFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
R + G+ V + +DEAQF E ++ R D D V+ GL D+ + F
Sbjct: 71 MIRDRLGAGP---VACVFVDEAQFLSPEQVWQLARVVDDLD-VPVLAYGLRVDFQGKLFP 126
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXL------IGGSDIYMPVCRQH 254
++ LAD + ++ C+ CG++A +R IGG++ Y+ +CR+H
Sbjct: 127 GSATLLALADEMREVRTICK-CGRKATMVIRQDASGRAITEGAQVQIGGNETYVSLCRKH 185
Query: 255 Y 255
+
Sbjct: 186 W 186
>UNIPROTKB|Q0BXG9 [details] [associations]
symbol:tdk "Thymidine kinase" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0004797 "thymidine kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] HAMAP:MF_00124 InterPro:IPR001267
InterPro:IPR020634 Pfam:PF00265 PIRSF:PIRSF035805 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0006260 GO:GO:0008270
GO:GO:0015949 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG1435 KO:K00857 ProtClustDB:PRK04296 GO:GO:0004797
PANTHER:PTHR11441 HOGENOM:HOG000076391 OMA:FRYGAMN
RefSeq:YP_761824.1 ProteinModelPortal:Q0BXG9 STRING:Q0BXG9
GeneID:4288172 KEGG:hne:HNE_3149 PATRIC:32219177
BioCyc:HNEP228405:GI69-3153-MONOMER Uniprot:Q0BXG9
Length = 195
Score = 138 (53.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 48/177 (27%), Positives = 75/177 (42%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSS-FR 145
M AGK+T LL+ ++G V ++ S G I + G+ T + F
Sbjct: 11 MNAGKSTILLQAAYNYRERGMEVLLMTSALYRDAGDGHISSRIGISAEAVLYTADTDLFS 70
Query: 146 QKFGSDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVI 203
A +D I +DEAQF ++ R ADH G V+ GL D+ F
Sbjct: 71 LIRDQRAIHAIDAIFVDEAQFLTKGQVWQLAR-VADHFGVPVLAYGLRTDFRGELFEGSA 129
Query: 204 DIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXXLIG-----GSDIYMPVCRQHY 255
++ +AD + ++ CE CG++A +R G G Y+ VCR+H+
Sbjct: 130 ALLAVADELREVRTICE-CGRKATMVVRLGPDGQALTEGEQISIGKTTYLSVCRRHW 185
>UNIPROTKB|K7ENW5 [details] [associations]
symbol:TK1 "Thymidine kinase" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0004797 "thymidine kinase activity"
evidence=IEA] InterPro:IPR001267 Pfam:PF00265 EMBL:AC087645
EMBL:AC021593 PANTHER:PTHR11441 HGNC:HGNC:11830
Ensembl:ENST00000590430 Uniprot:K7ENW5
Length = 87
Score = 121 (47.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHD 69
>TIGR_CMR|SO_3140 [details] [associations]
symbol:SO_3140 "thymidine kinase" species:211586
"Shewanella oneidensis MR-1" [GO:0004797 "thymidine kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] HAMAP:MF_00124
InterPro:IPR001267 InterPro:IPR020633 InterPro:IPR020634
Pfam:PF00265 PIRSF:PIRSF035805 PROSITE:PS00603 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0006260 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG1435 KO:K00857
ProtClustDB:PRK04296 GO:GO:0004797 PANTHER:PTHR11441
HOGENOM:HOG000076391 OMA:FRYGAMN RefSeq:NP_718698.1
ProteinModelPortal:Q8ECK0 GeneID:1170829 KEGG:son:SO_3140
PATRIC:23525952 Uniprot:Q8ECK0
Length = 192
Score = 130 (50.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 41/185 (22%), Positives = 80/185 (43%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
+++ M AGK+T+LL+ ++G N V+ ++ D RYG + + G++
Sbjct: 3 QLYFYYSAMNAGKSTSLLQSSYNYRERGMNTLVMTASIDDRYGKGKVASRIGIESDAQVF 62
Query: 139 TTLSSFRQKF-GSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ + + + + + + +DE QF ++ D V+ GL D+
Sbjct: 63 SSHDNLIEMITAAHQENHLSCVLVDECQFLSKEQVKQLTYIVDKIDIPVLCYGLRTDFQG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRXXXXXXXX------LIGGSDIYMPV 250
F ++ AD + +L C CG++A +R IGG++ Y V
Sbjct: 123 ELFSGSHYLLAWADKLVELKTICH-CGRKANMVVRLDGEGKVMREGEQVAIGGNESYESV 181
Query: 251 CRQHY 255
CR+H+
Sbjct: 182 CRKHF 186
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 280 272 0.00099 114 3 11 22 0.44 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 591 (63 KB)
Total size of DFA: 181 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.72u 0.11s 22.83t Elapsed: 00:00:01
Total cpu time: 22.72u 0.11s 22.83t Elapsed: 00:00:01
Start: Fri May 10 08:31:57 2013 End: Fri May 10 08:31:58 2013