BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023563
(280 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359497110|ref|XP_002266298.2| PREDICTED: thymidine kinase-like [Vitis vinifera]
Length = 283
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/283 (74%), Positives = 232/283 (81%), Gaps = 15/283 (5%)
Query: 6 RMKCLITPPFSLTPISLHLSKATT-----LASKSCFLNPATSLRNPKFIH--SMVSPRPP 58
RMK L++P FS +S HL+K T+ LASKS N L+NP +H S +S P
Sbjct: 3 RMKSLLSPSFS--TLSPHLTKTTSFSLYFLASKSILCNSQI-LKNPDCLHIKSTISSMKP 59
Query: 59 LFS---LQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSN 115
L S +Q+R EAS SS SGEIHVIVGPMF+GKTTTLLRRIQ+ET GR VA+IKSN
Sbjct: 60 LMSSNSIQSRRFQIEASQSS-SGEIHVIVGPMFSGKTTTLLRRIQSETSNGRKVAIIKSN 118
Query: 116 KDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCR 175
KDTRYGLDSIVTHDGVKLPC AL LSSFR+K GSDAYD++DVIGIDEAQFF DLY+FC
Sbjct: 119 KDTRYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEAQFFGDLYEFCC 178
Query: 176 EAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEE 235
+AADHDGKTVIVAGLDGDYLRRSFGSV+DIIPLADSVTKLTARCE CGKRAFFTLRKT E
Sbjct: 179 KAADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGKRAFFTLRKTAE 238
Query: 236 TKTELIGGSDIYMPVCRQHYVSGQVVV-EAARIVLESQKVQCG 277
KTELIGG+D+YMPVCRQHYVSGQVV+ EA RIVLESQKVQCG
Sbjct: 239 KKTELIGGADVYMPVCRQHYVSGQVVIEEATRIVLESQKVQCG 281
>gi|224139492|ref|XP_002323138.1| predicted protein [Populus trichocarpa]
gi|222867768|gb|EEF04899.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/222 (83%), Positives = 202/222 (90%)
Query: 57 PPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNK 116
P F +Q R +HS++S+SS SGEIHVIVGPMFAGKTTTLL R+QAE GRNVA+IKSNK
Sbjct: 5 PSNFPIQTRCVHSKSSLSSSSGEIHVIVGPMFAGKTTTLLHRVQAEINDGRNVAIIKSNK 64
Query: 117 DTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCRE 176
D RYGLDS+VTHDGVKLPCCAL LSSF+Q FG DAYDQ+DVIGIDEAQFF DLYDFCRE
Sbjct: 65 DNRYGLDSVVTHDGVKLPCCALPNLSSFKQSFGQDAYDQLDVIGIDEAQFFGDLYDFCRE 124
Query: 177 AADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET 236
ADHDGKTVIVAGLDGDYLRRSFGSV+DIIPLADSVTKL+ARCE CGKRAFFTLRKTEET
Sbjct: 125 VADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLSARCEICGKRAFFTLRKTEET 184
Query: 237 KTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKVQCGS 278
+TELIGG+D+YMPVCRQHYVSGQV VEAAR+VLESQK QCGS
Sbjct: 185 RTELIGGADVYMPVCRQHYVSGQVAVEAARMVLESQKAQCGS 226
>gi|356557967|ref|XP_003547281.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 279
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/285 (68%), Positives = 226/285 (79%), Gaps = 19/285 (6%)
Query: 7 MKCLITPPFS-LTPISLHLSKATTLASKSCFLNPAT--SLR-NPKFI-HSMVSPRPPLFS 61
MK L+ P FS L+P KA+ A S T S R NP+ I + ++ PP FS
Sbjct: 1 MKSLLNPKFSALSP------KASPFALFSLPSQSTTRFSFRSNPRRIPNRLLRLNPPPFS 54
Query: 62 -------LQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKS 114
+QNR+L +E S PSGEIHVIVGPMFAGKTT+LLRRIQ+ET GRNVA+IKS
Sbjct: 55 SNNFICAIQNRSLQTEPS-PPPSGEIHVIVGPMFAGKTTSLLRRIQSETANGRNVAIIKS 113
Query: 115 NKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFC 174
+KDTRYGLDSIVTHDG KLPC AL LSSF+QKFG DAY+++DVIGIDEAQFF+DLY+FC
Sbjct: 114 SKDTRYGLDSIVTHDGAKLPCWALANLSSFKQKFGMDAYEKLDVIGIDEAQFFDDLYEFC 173
Query: 175 REAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE 234
R+AADHDGKTVIVAGLDG+YLRRSFGSV+DIIPLADSVTKLTARCE CGKRA FTLRKT+
Sbjct: 174 RQAADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADSVTKLTARCEICGKRACFTLRKTQ 233
Query: 235 ETKTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKVQCGSY 279
+ + ELIGG D+YMPVCRQHY SGQV +EA R VLES+KV+CGS+
Sbjct: 234 DKQIELIGGVDVYMPVCRQHYASGQVAMEATRHVLESKKVECGSH 278
>gi|388507780|gb|AFK41956.1| unknown [Lotus japonicus]
Length = 279
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/279 (67%), Positives = 223/279 (79%), Gaps = 7/279 (2%)
Query: 7 MKCLITPPFS--LTPISLHLSKATTLASKSCFLNPATSLRNPKFIH---SMVSPRPPLFS 61
MK ++ P S L+P S S F+ P + R P + + S R + +
Sbjct: 1 MKSILNPKLSAALSPNLPKFSSFALFPRPSEFMTPFPT-RIPNHLRLNPTHFSSRNMIPT 59
Query: 62 LQNRNLHSEASVSSPS-GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY 120
QNR+L SE+S S+ S GEIHVIVGPMFAGKTT+L+RRIQ+E+ GRNVA+IKS+KDTRY
Sbjct: 60 TQNRSLQSESSASASSSGEIHVIVGPMFAGKTTSLIRRIQSESGNGRNVAIIKSSKDTRY 119
Query: 121 GLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH 180
GLDSIVTHDG KLPC AL LSSF+QKFG DAY+Q+DVIGIDEAQFF+DLYDFCREAADH
Sbjct: 120 GLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDDLYDFCREAADH 179
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL 240
DGKTV+VAGLDG+YLRR+FGSV+DIIPLADSVTKLTARCE CGK AFFTLRKT+ET+ EL
Sbjct: 180 DGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFTLRKTQETQVEL 239
Query: 241 IGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKVQCGSY 279
IGG D+YMPVCRQHYV+GQV +E R+VLESQKV+CGS+
Sbjct: 240 IGGVDVYMPVCRQHYVNGQVAMETTRLVLESQKVECGSH 278
>gi|449505560|ref|XP_004162508.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 244
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 172/220 (78%), Positives = 195/220 (88%)
Query: 55 PRPPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKS 114
P FS QNRN AS+S PSGEIHVI+GPMFAGKTTTLLRRIQ+E+ GR+VA+IKS
Sbjct: 19 PSKGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKS 78
Query: 115 NKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFC 174
NKDTRYGLDSIVTHDG+KLPC A+ LSSF++KFG +YD++DVIGIDEAQFF+DLYDFC
Sbjct: 79 NKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFC 138
Query: 175 REAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE 234
EAAD DGKTVIVAGLDGDYLRR+FGSV+DIIPLADSVTKLTARCE CG RAFFTLRKT+
Sbjct: 139 CEAADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQ 198
Query: 235 ETKTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKV 274
E +TELIGG+D+YMPVCRQHYVSGQV +E AR V+ES+KV
Sbjct: 199 EKETELIGGADMYMPVCRQHYVSGQVAIETARTVVESRKV 238
>gi|356532644|ref|XP_003534881.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 276
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 186/282 (65%), Positives = 223/282 (79%), Gaps = 16/282 (5%)
Query: 7 MKCLITPPFS-LTPISLHLSKATTLASKSCFLNPATSLRNPKFIHSMV---SPRPP---- 58
MK L+ P FS L+P + + + +S+ F + NP+ I + + +P P
Sbjct: 1 MKSLLNPKFSALSPKASPFALFSLPSSRFSFRS------NPRRIPNRLLRLNPSPCSSNN 54
Query: 59 -LFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKD 117
++QNR+L +E S PSGEIHVIVGPMFAGKTT+LLRRIQ+ET GRNVA+IKS+KD
Sbjct: 55 FCCTIQNRSLQTEPS-PPPSGEIHVIVGPMFAGKTTSLLRRIQSETTNGRNVAIIKSSKD 113
Query: 118 TRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREA 177
TRYGLDSIVTHDG +LPC AL LSSF+QKFG DAY+++DVIGIDEAQFF+DLY+FC +A
Sbjct: 114 TRYGLDSIVTHDGAELPCWALENLSSFKQKFGIDAYEKLDVIGIDEAQFFDDLYEFCLQA 173
Query: 178 ADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETK 237
ADHDGKTVIVAGLDG+YLRRSFGSV+DIIPLADSVTKLTARCE CGKRA FTLRKT++ +
Sbjct: 174 ADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADSVTKLTARCEICGKRACFTLRKTQDKQ 233
Query: 238 TELIGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKVQCGSY 279
ELIGG D+YMPVCRQHYVSGQV +EA R VLES KV+C S+
Sbjct: 234 IELIGGVDVYMPVCRQHYVSGQVAMEATRHVLESHKVECASH 275
>gi|224086509|ref|XP_002307900.1| predicted protein [Populus trichocarpa]
gi|222853876|gb|EEE91423.1| predicted protein [Populus trichocarpa]
Length = 192
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 169/192 (88%), Positives = 179/192 (93%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
GEIHVIVGPMFAGKTTTLL R+QAE GRNVA+IKSNKD RYGLDS+ THDGVKLPCCA
Sbjct: 1 GEIHVIVGPMFAGKTTTLLHRVQAEINDGRNVAIIKSNKDNRYGLDSVATHDGVKLPCCA 60
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L LSSFRQK G DAYDQ+DVIGIDEAQFFEDLYDFCRE ADHDGKTVIVAGLDGDYLRR
Sbjct: 61 LPNLSSFRQKLGQDAYDQLDVIGIDEAQFFEDLYDFCREVADHDGKTVIVAGLDGDYLRR 120
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
SFGSV+DIIPLADSVTKL+ARCE CGKRAFFTLRKTEET+TELIGG+D+YMPVCRQHYVS
Sbjct: 121 SFGSVLDIIPLADSVTKLSARCEICGKRAFFTLRKTEETQTELIGGADVYMPVCRQHYVS 180
Query: 258 GQVVVEAARIVL 269
GQV VEAAR+VL
Sbjct: 181 GQVAVEAARMVL 192
>gi|449443536|ref|XP_004139533.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 244
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 191/220 (86%)
Query: 55 PRPPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKS 114
P FS QNRN AS+S PSGEIHVI+GPMFAGKTTTLLRRIQ+E+ GR+VA+IKS
Sbjct: 19 PSKGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKS 78
Query: 115 NKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFC 174
NKDTRYGLDSIVTHDG+KLPC A+ LSSF++KFG +YD++DVIGIDEAQFF+DLYDFC
Sbjct: 79 NKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFC 138
Query: 175 REAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE 234
EAAD DGKTVIVAGLD RR+FGSV+DIIPLADSVTKLTARCE CG RAFFTLRKT+
Sbjct: 139 CEAADIDGKTVIVAGLDXXXXRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQ 198
Query: 235 ETKTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKV 274
E +TELIGG+D+YMPVCRQHYVSGQV +E AR V+ES+KV
Sbjct: 199 EKETELIGGADMYMPVCRQHYVSGQVAIETARTVVESRKV 238
>gi|359485880|ref|XP_003633348.1| PREDICTED: thymidine kinase-like [Vitis vinifera]
Length = 234
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/203 (79%), Positives = 181/203 (89%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S+ GE+HVIVGPMFAGKTT LLRRI++E+ GRNVA+IKS+KDTRY DSIVTHDG
Sbjct: 17 GSIHRALGEVHVIVGPMFAGKTTALLRRIKSESNNGRNVAMIKSSKDTRYATDSIVTHDG 76
Query: 131 VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
VK PC AL LSSFRQKFG++AY++++VIGIDEAQFFEDLYDFC E ADHDGKTVIVAGL
Sbjct: 77 VKFPCWALPDLSSFRQKFGAEAYEKLEVIGIDEAQFFEDLYDFCCEVADHDGKTVIVAGL 136
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
DGDYLRRSFGSV+D+IPLADSVTKLTARCE CGKRAFFTLRK EE +TELIGG+DIYMPV
Sbjct: 137 DGDYLRRSFGSVLDVIPLADSVTKLTARCELCGKRAFFTLRKIEEMQTELIGGADIYMPV 196
Query: 251 CRQHYVSGQVVVEAARIVLESQK 273
CRQHYV+GQ V+EAAR LES+K
Sbjct: 197 CRQHYVNGQAVIEAARNALESRK 219
>gi|255586437|ref|XP_002533863.1| thymidine kinase, putative [Ricinus communis]
gi|223526185|gb|EEF28513.1| thymidine kinase, putative [Ricinus communis]
Length = 234
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/208 (76%), Positives = 183/208 (87%), Gaps = 2/208 (0%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+ P+GE+HVIVGPMFAGKTT LLRRI +E GRNVA+IKS+KDTRY DS+VTHDG+K
Sbjct: 20 NKPAGEVHVIVGPMFAGKTTALLRRINSEGSNGRNVAMIKSSKDTRYARDSVVTHDGLKF 79
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
PC AL LSSFR K G DAY ++DVIGIDEAQFFEDLYDFC +AADHDGKTVIVAGLDGD
Sbjct: 80 PCWALPDLSSFRDKLGHDAYQRIDVIGIDEAQFFEDLYDFCSKAADHDGKTVIVAGLDGD 139
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
YLRRSFGSV+D+IPLAD+VTKLTARCE CGKRAFFTLRKT ET+TELIGG+D+YMPVCR+
Sbjct: 140 YLRRSFGSVLDVIPLADNVTKLTARCELCGKRAFFTLRKTAETQTELIGGADMYMPVCRR 199
Query: 254 HYVSGQVVVEAARIVL--ESQKVQCGSY 279
HYV+GQVV+EAAR VL +S K+Q S+
Sbjct: 200 HYVNGQVVMEAARNVLVADSCKLQPDSH 227
>gi|195635845|gb|ACG37391.1| thymidine kinase [Zea mays]
Length = 281
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/248 (64%), Positives = 194/248 (78%), Gaps = 5/248 (2%)
Query: 26 KATTLASKSCFLNPATSLRNPKFIHSMVSPRPPLFSLQNRNLHSEASV---SSPSGEIHV 82
+A+ AS+S L R + +M+ + S + A++ ++ SGEIHV
Sbjct: 24 RASXFASRSLLLY--LPFRRGRAARNMLGAARSISSAAPARVXGGAAMEVRAAQSGEIHV 81
Query: 83 IVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLS 142
IVGPMFAGKTT LLRR+QAE GR+VA+IKS+KD RYGLDS+VTHDG K+ C AL+ LS
Sbjct: 82 IVGPMFAGKTTALLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVTHDGTKMACWALSELS 141
Query: 143 SFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSV 202
SF K G DAY++VDVIGIDEAQFF+DLYDFC +AAD DGK V+VAGLDGDY RR FGS+
Sbjct: 142 SFHDKLGIDAYNKVDVIGIDEAQFFDDLYDFCCKAADRDGKIVVVAGLDGDYKRRKFGSI 201
Query: 203 IDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQVVV 262
+DI+PLADSVTKLTARCE CG+RAFFTLRKT+ETKTELIGG+D+YMPVCRQHY+ GQ+V+
Sbjct: 202 LDIVPLADSVTKLTARCELCGRRAFFTLRKTQETKTELIGGADVYMPVCRQHYMDGQIVI 261
Query: 263 EAARIVLE 270
EA RIVL+
Sbjct: 262 EATRIVLD 269
>gi|115450267|ref|NP_001048734.1| Os03g0113100 [Oryza sativa Japonica Group]
gi|108705823|gb|ABF93618.1| Thymidine kinase, putative, expressed [Oryza sativa Japonica Group]
gi|113547205|dbj|BAF10648.1| Os03g0113100 [Oryza sativa Japonica Group]
gi|215697091|dbj|BAG91085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 276
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/204 (75%), Positives = 177/204 (86%), Gaps = 1/204 (0%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S P GEIHVIVGPMFAGKTT LLRR+Q E GRNVA+IKS+KD RYGLDS+VTHD
Sbjct: 66 EAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHD 124
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
G K+PC AL LSSF+ K G++AYD+VDVIGIDEAQFF+DL+DFC +AAD DGK V+VAG
Sbjct: 125 GTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAG 184
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LDGDY R FGSV+DIIPLADSVTKLTARCE CG+RAFFTLRKT ETKTELIGG+D+YMP
Sbjct: 185 LDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYMP 244
Query: 250 VCRQHYVSGQVVVEAARIVLESQK 273
VCRQHY+ GQ+V+EA RIVL+ +K
Sbjct: 245 VCRQHYLDGQIVIEATRIVLDLEK 268
>gi|27476082|gb|AAO17013.1| Putative thymidine kinase [Oryza sativa Japonica Group]
gi|125584671|gb|EAZ25335.1| hypothetical protein OsJ_09147 [Oryza sativa Japonica Group]
Length = 270
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/204 (75%), Positives = 177/204 (86%), Gaps = 1/204 (0%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S P GEIHVIVGPMFAGKTT LLRR+Q E GRNVA+IKS+KD RYGLDS+VTHD
Sbjct: 60 EAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHD 118
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
G K+PC AL LSSF+ K G++AYD+VDVIGIDEAQFF+DL+DFC +AAD DGK V+VAG
Sbjct: 119 GTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAG 178
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LDGDY R FGSV+DIIPLADSVTKLTARCE CG+RAFFTLRKT ETKTELIGG+D+YMP
Sbjct: 179 LDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYMP 238
Query: 250 VCRQHYVSGQVVVEAARIVLESQK 273
VCRQHY+ GQ+V+EA RIVL+ +K
Sbjct: 239 VCRQHYLDGQIVIEATRIVLDLEK 262
>gi|167830254|emb|CAM34547.1| putative thymidine kinase 1 [Zea mays]
gi|194703294|gb|ACF85731.1| unknown [Zea mays]
gi|194704256|gb|ACF86212.1| unknown [Zea mays]
gi|414867387|tpg|DAA45944.1| TPA: chloroplast thymidine kinase [Zea mays]
Length = 279
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 149/197 (75%), Positives = 175/197 (88%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
++ SGEIHVIVGPMFAGKTT LLRR+QAE GR+VA+IKS+KD RYGLDS+VTHDG K+
Sbjct: 71 AAQSGEIHVIVGPMFAGKTTALLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVTHDGTKM 130
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
C AL+ LSSF K G +AY++VDVIGIDEAQFF+DLYDFC +AAD DGK V+VAGLDGD
Sbjct: 131 ACWALSELSSFHDKLGIEAYNKVDVIGIDEAQFFDDLYDFCCKAADRDGKIVVVAGLDGD 190
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y RR FGS++DI+PLADSVTKLTARCE CG+RAFFTLRKT+ETKTELIGG+D+YMPVCRQ
Sbjct: 191 YKRRKFGSILDIVPLADSVTKLTARCELCGRRAFFTLRKTQETKTELIGGADVYMPVCRQ 250
Query: 254 HYVSGQVVVEAARIVLE 270
HY+ GQ+V+EA RIVL+
Sbjct: 251 HYMDGQIVIEATRIVLD 267
>gi|242035325|ref|XP_002465057.1| hypothetical protein SORBIDRAFT_01g031430 [Sorghum bicolor]
gi|241918911|gb|EER92055.1| hypothetical protein SORBIDRAFT_01g031430 [Sorghum bicolor]
Length = 284
Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 191/252 (75%), Gaps = 27/252 (10%)
Query: 46 PKFIHSMVSP-RPPLFSL--------QNRNLHSEA-SVSSP-----------------SG 78
P + + P RPPL SL RN+ A SVS+ SG
Sbjct: 21 PNVLRASAFPSRPPLLSLPFRRGRALAARNMLGAARSVSAAVQSRAGGGAAVEARAAQSG 80
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
EIHVIVGPMFAGKTT LLRR+QAE GR+VA+IKS+KD RYGLDS+VTHDG K+ C AL
Sbjct: 81 EIHVIVGPMFAGKTTALLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVTHDGTKMACWAL 140
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
+ LSSF +K G +AY++VDVIGIDEAQFF+DLYDFC +AAD DGK V+VAGLDGDY R+
Sbjct: 141 SELSSFHEKLGIEAYNEVDVIGIDEAQFFDDLYDFCCKAADRDGKIVVVAGLDGDYKRKK 200
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSG 258
FGSV+DI+PLADSVTKLTARCE CG RAFFTLRKT+ETKTELIGG+D+YMPVCRQHY+ G
Sbjct: 201 FGSVLDIVPLADSVTKLTARCELCGHRAFFTLRKTQETKTELIGGADVYMPVCRQHYMDG 260
Query: 259 QVVVEAARIVLE 270
Q+V+EA RIVL+
Sbjct: 261 QIVIEATRIVLD 272
>gi|357111878|ref|XP_003557737.1| PREDICTED: thymidine kinase-like [Brachypodium distachyon]
Length = 279
Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 164/261 (62%), Positives = 191/261 (73%), Gaps = 32/261 (12%)
Query: 40 ATSLRNPKFIHSMVSPRPPLFSLQNR------NLHSEASVS------------------- 74
+TSLR+ FI PR P SL R L S+S
Sbjct: 16 STSLRSSAFI-----PRAPFLSLPFRRDLSCSKLRLARSISTAAAAVKARAGGGRPLMEV 70
Query: 75 --SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+ SGEIHVIVGPMFAGKTT L+RR+QAE GR VA+IKS+KD RYGLDS VTHDG K
Sbjct: 71 RAAQSGEIHVIVGPMFAGKTTALIRRVQAEAATGRTVALIKSDKDNRYGLDSAVTHDGTK 130
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ C AL LSSF+ K G++AYD+VDVIGIDEAQFF+DLYDFC +AADHDGK V+VAGLDG
Sbjct: 131 MACWALPKLSSFQDKLGTEAYDKVDVIGIDEAQFFDDLYDFCCKAADHDGKIVVVAGLDG 190
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY R FGSV+DIIPLADSVTKLTARCE CG RAFFTLRKT+ET+TE IGG+D+YMPVCR
Sbjct: 191 DYKRNKFGSVLDIIPLADSVTKLTARCELCGHRAFFTLRKTQETRTEFIGGADVYMPVCR 250
Query: 253 QHYVSGQVVVEAARIVLESQK 273
QHY+ GQ+V+EA RIV+E ++
Sbjct: 251 QHYLDGQIVIEATRIVMEVER 271
>gi|3411152|gb|AAC31168.1| thymidine kinase [Oryza sativa Japonica Group]
Length = 212
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/204 (75%), Positives = 177/204 (86%), Gaps = 1/204 (0%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S P GEIHVIVGPMFAGKTT LLRR+Q E GRNVA+IKS+KD RYGLDS+VTHD
Sbjct: 2 EAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHD 60
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
G K+PC AL LSSF+ K G++AYD+VDVIGIDEAQFF+DL+DFC +AAD DGK V+VAG
Sbjct: 61 GTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAG 120
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LDGDY R FGSV+DIIPLADSVTKLTARCE CG+RAFFTLRKT ETKTELIGG+D+YMP
Sbjct: 121 LDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYMP 180
Query: 250 VCRQHYVSGQVVVEAARIVLESQK 273
VCRQHY+ GQ+V+EA RIVL+ +K
Sbjct: 181 VCRQHYLDGQIVIEATRIVLDLEK 204
>gi|125542117|gb|EAY88256.1| hypothetical protein OsI_09708 [Oryza sativa Indica Group]
Length = 271
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/204 (75%), Positives = 177/204 (86%), Gaps = 1/204 (0%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S P GEIHVIVGPMFAGKTT LLRR+Q E GRNVA+IKS+KD RYGLDS+VTHD
Sbjct: 61 EAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHD 119
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
G K+PC AL LSSF+ K G++AYD+VDVIGIDEAQFF+DL++FC +AAD DGK V+VAG
Sbjct: 120 GTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHEFCCKAADRDGKIVVVAG 179
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LDGDY R FGSV+DIIPLADSVTKLTARCE CG+RAFFTLRKT ETKTELIGG+D+YMP
Sbjct: 180 LDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYMP 239
Query: 250 VCRQHYVSGQVVVEAARIVLESQK 273
VCRQHY+ GQ+V+EA RIVL+ +K
Sbjct: 240 VCRQHYLDGQIVIEATRIVLDLEK 263
>gi|224068851|ref|XP_002302841.1| predicted protein [Populus trichocarpa]
gi|222844567|gb|EEE82114.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/196 (77%), Positives = 174/196 (88%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
GE+HVI+GPMFAGKTT LLRRI++E+ GRNVA+IKS+KDTRY DS+VTHDG+K PC +
Sbjct: 1 GEVHVIIGPMFAGKTTDLLRRIESESSSGRNVAMIKSSKDTRYANDSVVTHDGLKFPCWS 60
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L L+SF K G D Y ++DVIGIDEAQFFEDLY+FC +AADHDGKT+IVAGLDGDYLRR
Sbjct: 61 LPDLTSFHHKLGDDEYHKLDVIGIDEAQFFEDLYEFCCKAADHDGKTIIVAGLDGDYLRR 120
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
SFGSV+D+IPLAD+VTKLTARCE CGKRAFFTLRKT ET+TELIGGSD+YMPVCRQHYVS
Sbjct: 121 SFGSVLDVIPLADTVTKLTARCELCGKRAFFTLRKTAETQTELIGGSDLYMPVCRQHYVS 180
Query: 258 GQVVVEAARIVLESQK 273
GQ V+E+ R VLES K
Sbjct: 181 GQAVIESTRNVLESYK 196
>gi|97536559|sp|O81263.2|KITH_ORYSJ RecName: Full=Thymidine kinase
Length = 271
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 177/205 (86%), Gaps = 2/205 (0%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIKSNKDTRYGLDSIVTH 128
EA S P GEIHVIVGPMFAGKTT LLRR+Q E G RNVA+IKS+KD RYGLDS+VTH
Sbjct: 60 EAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTH 118
Query: 129 DGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
DG K+PC AL LSSF+ K G++AYD+VDVIGIDEAQFF+DL+DFC +AAD DGK V+VA
Sbjct: 119 DGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVA 178
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
GLDGDY R FGSV+DIIPLADSVTKLTARCE CG+RAFFTLRKT ETKTELIGG+D+YM
Sbjct: 179 GLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYM 238
Query: 249 PVCRQHYVSGQVVVEAARIVLESQK 273
PVCRQHY+ GQ+V+EA RIVL+ +K
Sbjct: 239 PVCRQHYLDGQIVIEATRIVLDLEK 263
>gi|108705824|gb|ABF93619.1| Thymidine kinase, putative, expressed [Oryza sativa Japonica Group]
gi|215694639|dbj|BAG89830.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 177/205 (86%), Gaps = 2/205 (0%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIKSNKDTRYGLDSIVTH 128
EA S P GEIHVIVGPMFAGKTT LLRR+Q E G RNVA+IKS+KD RYGLDS+VTH
Sbjct: 66 EAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTH 124
Query: 129 DGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
DG K+PC AL LSSF+ K G++AYD+VDVIGIDEAQFF+DL+DFC +AAD DGK V+VA
Sbjct: 125 DGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVA 184
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
GLDGDY R FGSV+DIIPLADSVTKLTARCE CG+RAFFTLRKT ETKTELIGG+D+YM
Sbjct: 185 GLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYM 244
Query: 249 PVCRQHYVSGQVVVEAARIVLESQK 273
PVCRQHY+ GQ+V+EA RIVL+ +K
Sbjct: 245 PVCRQHYLDGQIVIEATRIVLDLEK 269
>gi|296084994|emb|CBI28409.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/187 (81%), Positives = 170/187 (90%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MFAGKTT LLRRI++E+ GRNVA+IKS+KDTRY DSIVTHDGVK PC AL LSSFRQ
Sbjct: 1 MFAGKTTALLRRIKSESNNGRNVAMIKSSKDTRYATDSIVTHDGVKFPCWALPDLSSFRQ 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
KFG++AY++++VIGIDEAQFFEDLYDFC E ADHDGKTVIVAGLDGDYLRRSFGSV+D+I
Sbjct: 61 KFGAEAYEKLEVIGIDEAQFFEDLYDFCCEVADHDGKTVIVAGLDGDYLRRSFGSVLDVI 120
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQVVVEAAR 266
PLADSVTKLTARCE CGKRAFFTLRK EE +TELIGG+DIYMPVCRQHYV+GQ V+EAAR
Sbjct: 121 PLADSVTKLTARCELCGKRAFFTLRKIEEMQTELIGGADIYMPVCRQHYVNGQAVIEAAR 180
Query: 267 IVLESQK 273
LES+K
Sbjct: 181 NALESRK 187
>gi|350535573|ref|NP_001234713.1| TK1-like deoxyribonucleoside kinase [Solanum lycopersicum]
gi|33325041|gb|AAQ08180.1| TK1-like deoxyribonucleoside kinase [Solanum lycopersicum]
Length = 234
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/199 (73%), Positives = 172/199 (86%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P GEIHVIVGPMFAGKTT LLRR+ E+ GRNV +IKS+KD RY +D++VTHDG + PC
Sbjct: 23 PVGEIHVIVGPMFAGKTTALLRRVNLESNDGRNVVLIKSSKDARYAVDAVVTHDGTRFPC 82
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
+L LSSF+Q+FG DAY++VDVIGIDEAQFF DLY+FC AAD DGK ++VAGLDGDYL
Sbjct: 83 WSLPDLSSFKQRFGKDAYEKVDVIGIDEAQFFGDLYEFCCNAADFDGKIIVVAGLDGDYL 142
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R+SFGSV+DIIPLAD+VTKLTARCE C +RAFFT RKT ET+TELIGG+DIYMPVCRQHY
Sbjct: 143 RKSFGSVLDIIPLADTVTKLTARCELCNRRAFFTFRKTNETETELIGGADIYMPVCRQHY 202
Query: 256 VSGQVVVEAARIVLESQKV 274
V+GQ V E+A++VLES KV
Sbjct: 203 VNGQSVNESAKMVLESHKV 221
>gi|449444618|ref|XP_004140071.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 233
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 142/198 (71%), Positives = 173/198 (87%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+GE+HVI+GPMFAGKTT LLRRI++E+ GRNV +IKS+KDTRY +DS+VTHDGVK PC
Sbjct: 27 AGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCW 86
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
AL LSSFRQKFG DAY+++DVIG+DEAQFF+DLYDFC AD DGK ++VAGLDGDYLR
Sbjct: 87 ALPDLSSFRQKFGEDAYNELDVIGVDEAQFFDDLYDFCCNVADRDGKIIVVAGLDGDYLR 146
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
RSFGSV+D++PLAD+VTKLTARCE CGKRAFFTLRKTEETKTELI G+D+YMPVCR HY
Sbjct: 147 RSFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETKTELIAGADVYMPVCRHHYA 206
Query: 257 SGQVVVEAARIVLESQKV 274
GQ V+++++ + S+ +
Sbjct: 207 IGQEVIQSSKNAMGSRTI 224
>gi|449505149|ref|XP_004162390.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 235
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 142/198 (71%), Positives = 173/198 (87%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+GE+HVI+GPMFAGKTT LLRRI++E+ GRNV +IKS+KDTRY +DS+VTHDGVK PC
Sbjct: 27 AGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCW 86
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
AL LSSFRQKFG DAY+++DVIG+DEAQFF+DLYDFC AD DGK ++VAGLDGDYLR
Sbjct: 87 ALPDLSSFRQKFGEDAYNELDVIGVDEAQFFDDLYDFCCNVADRDGKIIVVAGLDGDYLR 146
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
RSFGSV+D++PLAD+VTKLTARCE CGKRAFFTLRKTEETKTELI G+D+YMPVCR HY
Sbjct: 147 RSFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETKTELIAGADVYMPVCRHHYA 206
Query: 257 SGQVVVEAARIVLESQKV 274
GQ V+++++ + S+ +
Sbjct: 207 IGQEVIQSSKNAMGSRTI 224
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/174 (87%), Positives = 162/174 (93%), Gaps = 1/174 (0%)
Query: 105 KGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEA 164
KGR VA+IKSNKDTRYGLDSIVTHDGVKLPC AL LSSFR+K GSDAYD++DVIGIDEA
Sbjct: 490 KGRKVAIIKSNKDTRYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEA 549
Query: 165 QFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGK 224
QFF DLY+FC +AADHDGKTVIVAGLDGDYLRRSFGSV+DIIPLADSVTKLTARCE CGK
Sbjct: 550 QFFGDLYEFCCKAADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGK 609
Query: 225 RAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQVVV-EAARIVLESQKVQCG 277
RAFFTLRKT E KTELIGG+D+YMPVCRQHYVSGQVV+ EA RIVLESQKVQCG
Sbjct: 610 RAFFTLRKTAEKKTELIGGADVYMPVCRQHYVSGQVVIEEATRIVLESQKVQCG 663
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Query: 61 SLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKG 106
S+Q+R EAS SS SGEIHVIVGPMF+GKTTTLLRRIQ+ET G
Sbjct: 5 SIQSRRFQIEASQSS-SGEIHVIVGPMFSGKTTTLLRRIQSETSNG 49
>gi|297808299|ref|XP_002872033.1| hypothetical protein ARALYDRAFT_910314 [Arabidopsis lyrata subsp.
lyrata]
gi|297317870|gb|EFH48292.1| hypothetical protein ARALYDRAFT_910314 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/270 (59%), Positives = 206/270 (76%), Gaps = 11/270 (4%)
Query: 7 MKCLITPPFSLTPISLHLSKATTLASKSCFLNPATSLRNPKFIHSMVSPRPPLFSLQNRN 66
M+ LI+P SL P SLHL K + ++ F + TS + I++ P ++ R
Sbjct: 6 MRTLISP--SLAPFSLHLPKPSLFSTALRFSSLTTSTIS---INNRSPTNAPPSAISTRK 60
Query: 67 LHSEA----SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL 122
L ++A S ++P GEIHV+VGPMF+GKTTTLLRRI AE + G+ +A+IKSNKDTRY
Sbjct: 61 LQTKATAPLSFTTP-GEIHVVVGPMFSGKTTTLLRRILAEKETGKQIAIIKSNKDTRYCT 119
Query: 123 DSIVTHDGVKLPCCALTTLSSFRQKFGSDAYD-QVDVIGIDEAQFFEDLYDFCREAADHD 181
+SIVTHDG K PC +L LSSF+++FG D Y+ ++DVIGIDEAQFF DLY+FCR+AAD +
Sbjct: 120 ESIVTHDGEKFPCWSLPDLSSFKERFGFDEYENRLDVIGIDEAQFFGDLYEFCRQAADRE 179
Query: 182 GKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELI 241
GKTVIVAGLDGD+ RR FGSV+D+IP+AD+VTKLT+RCE CGKRA FT+RKTEE +TELI
Sbjct: 180 GKTVIVAGLDGDFKRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETELI 239
Query: 242 GGSDIYMPVCRQHYVSGQVVVEAARIVLES 271
GG+++YMPVCR HYV GQ V+E AR VL+S
Sbjct: 240 GGAEVYMPVCRSHYVCGQSVLETARAVLDS 269
>gi|357462597|ref|XP_003601580.1| Thymidine kinase [Medicago truncatula]
gi|355490628|gb|AES71831.1| Thymidine kinase [Medicago truncatula]
Length = 226
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 175/204 (85%), Gaps = 1/204 (0%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
GEIH+ VGPMFAGKTT+LLRRI++E GRNVA++KS+KD RY +DS+VTHDG+K PC A
Sbjct: 17 GEIHLFVGPMFAGKTTSLLRRIKSEVDNGRNVAMLKSSKDNRYAVDSVVTHDGIKFPCWA 76
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L L F+ K+G +AY ++DVIGIDEAQFFEDLYDFC +AAD DGK V+VAGLDGDY+RR
Sbjct: 77 LPDLMLFKDKYGHEAYQKLDVIGIDEAQFFEDLYDFCCKAADEDGKIVVVAGLDGDYMRR 136
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
SFGSV+ IIP+AD+VTKLTARCE CGKRAFFTLRKT E +TELIGG+D+YMPVCR HYV+
Sbjct: 137 SFGSVLHIIPIADTVTKLTARCELCGKRAFFTLRKTGEKQTELIGGADLYMPVCRHHYVN 196
Query: 258 GQVVVEAA-RIVLESQKVQCGSYV 280
GQVVVEAA + V SQKV CGS +
Sbjct: 197 GQVVVEAAMKSVFGSQKVGCGSLI 220
>gi|9759365|dbj|BAB09824.1| unnamed protein product [Arabidopsis thaliana]
Length = 277
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/277 (58%), Positives = 205/277 (74%), Gaps = 23/277 (8%)
Query: 7 MKCLITPPFSLTPISLHLSKATTLASKSCFLNPATSLRNPKFIHSMVSPRPPLFSLQNRN 66
M+ LI+P SL P SLHL K + + T+LR I+++ P ++ R
Sbjct: 1 MRTLISP--SLAPFSLHLHKPSLFS---------TALRFSFSINNITPTNSPPSTISTRK 49
Query: 67 LHSEAS-----------VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSN 115
L ++A+ SS GEIHV+VGPMF+GKTTTLLRRI AE + G+ +A+IKSN
Sbjct: 50 LQTKATRVTSSSSSQPLSSSSPGEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSN 109
Query: 116 KDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYD-QVDVIGIDEAQFFEDLYDFC 174
KDTRY +SIVTHDG K PC +L LSSF+++FG D Y+ ++DVIGIDEAQFF DLY+FC
Sbjct: 110 KDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFC 169
Query: 175 REAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE 234
REAAD +GKTVIVAGLDGD++RR FGSV+D+IP+AD+VTKLT+RCE CGKRA FT+RKTE
Sbjct: 170 REAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTE 229
Query: 235 ETKTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLES 271
E +TELIGG+++YMPVCR HYV GQ V+E AR VL+S
Sbjct: 230 EKETELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 266
>gi|18420635|ref|NP_568426.1| Thymidine kinase [Arabidopsis thaliana]
gi|332005732|gb|AED93115.1| Thymidine kinase [Arabidopsis thaliana]
Length = 282
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/277 (58%), Positives = 205/277 (74%), Gaps = 23/277 (8%)
Query: 7 MKCLITPPFSLTPISLHLSKATTLASKSCFLNPATSLRNPKFIHSMVSPRPPLFSLQNRN 66
M+ LI+P SL P SLHL K + + T+LR I+++ P ++ R
Sbjct: 6 MRTLISP--SLAPFSLHLHKPSLFS---------TALRFSFSINNITPTNSPPSTISTRK 54
Query: 67 LHSEAS-----------VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSN 115
L ++A+ SS GEIHV+VGPMF+GKTTTLLRRI AE + G+ +A+IKSN
Sbjct: 55 LQTKATRVTSSSSSQPLSSSSPGEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSN 114
Query: 116 KDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYD-QVDVIGIDEAQFFEDLYDFC 174
KDTRY +SIVTHDG K PC +L LSSF+++FG D Y+ ++DVIGIDEAQFF DLY+FC
Sbjct: 115 KDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFC 174
Query: 175 REAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE 234
REAAD +GKTVIVAGLDGD++RR FGSV+D+IP+AD+VTKLT+RCE CGKRA FT+RKTE
Sbjct: 175 REAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTE 234
Query: 235 ETKTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLES 271
E +TELIGG+++YMPVCR HYV GQ V+E AR VL+S
Sbjct: 235 EKETELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271
>gi|357447967|ref|XP_003594259.1| Thymidine kinase [Medicago truncatula]
gi|355483307|gb|AES64510.1| Thymidine kinase [Medicago truncatula]
Length = 644
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 174/214 (81%), Gaps = 4/214 (1%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKG----RNVAVIKSNKDTRYGLDSI 125
E + SP E VI G + + ++A ++ NVA+IKS+KDTRYGLDSI
Sbjct: 430 EFVLKSPYKEHSVIWGALLGACLWDDVEEVRASLRESGVTKENVAIIKSSKDTRYGLDSI 489
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
VTHDG KLPC AL+ LSSF+QKFG DAYDQ+DVIGIDEAQFF+DLYDFCREAADHDGKTV
Sbjct: 490 VTHDGTKLPCWALSNLSSFKQKFGVDAYDQLDVIGIDEAQFFDDLYDFCREAADHDGKTV 549
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLDGDYLR+SFGSV+DIIPLADS+TKL ARCE CGK A+FTLRKT++ + ELIGG D
Sbjct: 550 IVAGLDGDYLRKSFGSVLDIIPLADSITKLNARCEICGKNAYFTLRKTQDKQVELIGGVD 609
Query: 246 IYMPVCRQHYVSGQVVVEAARIVLESQKVQCGSY 279
+YMPVCRQHYV+GQV VE AR V+ES+KV+CGS+
Sbjct: 610 VYMPVCRQHYVNGQVAVETARHVVESKKVECGSH 643
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 15/109 (13%)
Query: 7 MKCLITPPFSLTPISLHLSKATTLASKS-------CFLNPATSLRNPKFIHSMVSPRPPL 59
MK ++ P FS +S + K ++ + S F N +S NP ++S +P +
Sbjct: 33 MKSILNPKFS--SLSCNFPKLSSFSLFSHPLQFSILFRNNPSSFSNPLRLNST---KPFI 87
Query: 60 FSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRN 108
+ QNR + SS SG+IHVIVGPMFAGKT++L+RRIQ+E+ GR+
Sbjct: 88 PNSQNRTFQAS---SSTSGDIHVIVGPMFAGKTSSLIRRIQSESGNGRS 133
>gi|255645307|gb|ACU23150.1| unknown [Glycine max]
Length = 216
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 175/210 (83%), Gaps = 3/210 (1%)
Query: 66 NLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI 125
+L + +SS SGE+HVIVGPMFAGKTT LL RI++E +NV ++KS+KDTRY +DS+
Sbjct: 8 SLDTAKDLSSSSGEVHVIVGPMFAGKTTALLCRIESELNAAKNVVLLKSSKDTRYAIDSV 67
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
VTHDG+K PC AL L SFR+K G DAY ++DVIGIDEAQFFEDLY+FC +AAD DGKTV
Sbjct: 68 VTHDGIKFPCRALPDLLSFREKHGDDAYQKLDVIGIDEAQFFEDLYEFCCKAADEDGKTV 127
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLDGDYLRRSFGSV+ IIPLADSVTKLTARCE CGKRAFFTLRKTE+ +TELIGG+D
Sbjct: 128 IVAGLDGDYLRRSFGSVLHIIPLADSVTKLTARCELCGKRAFFTLRKTEQRETELIGGAD 187
Query: 246 IYMPVCRQHYVSGQVVVEAARIVLESQKVQ 275
+YMPVCR HY++ QV A R VLESQ +
Sbjct: 188 LYMPVCRLHYLNSQV---AERSVLESQNFK 214
>gi|356547841|ref|XP_003542313.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 216
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 175/210 (83%), Gaps = 3/210 (1%)
Query: 66 NLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI 125
+L + +S+ SGE+HVIVGPMFAGKTT LL RI++E +NV ++KS+KDTRY +DS+
Sbjct: 8 SLDTAKDLSNSSGEVHVIVGPMFAGKTTALLCRIESELNAAKNVVLLKSSKDTRYAIDSV 67
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
VTHDG+K PC AL L SFR+K G DAY ++DVIGIDEAQFFEDLY+FC +AAD DGKTV
Sbjct: 68 VTHDGIKFPCRALPDLLSFREKHGDDAYQKLDVIGIDEAQFFEDLYEFCCKAADEDGKTV 127
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLDGDYLRRSFGSV+ IIPLADSVTKLTARCE CGKRAFFTLRKTE+ +TELIGG+D
Sbjct: 128 IVAGLDGDYLRRSFGSVLHIIPLADSVTKLTARCELCGKRAFFTLRKTEQRETELIGGAD 187
Query: 246 IYMPVCRQHYVSGQVVVEAARIVLESQKVQ 275
+YMPVCR HY++ QV A R VLESQ +
Sbjct: 188 LYMPVCRLHYLNSQV---AERSVLESQNFK 214
>gi|302121704|gb|ADK92870.1| thymidine kinase [Hypericum perforatum]
Length = 239
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 141/201 (70%), Positives = 169/201 (84%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
GEIHVI+GPMFAGKTT LLRRI +E+ GR VA+IKS+KD RY +DS+VTHDG+K PC A
Sbjct: 20 GEIHVIIGPMFAGKTTALLRRITSESDGGRKVAMIKSSKDNRYAVDSVVTHDGLKFPCWA 79
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L+ LSSF + G +AYD +DVIGIDEAQFF+DLYDFC AAD DGK V+VAGLDGDYLR+
Sbjct: 80 LSDLSSFNLRLGHEAYDSIDVIGIDEAQFFDDLYDFCCTAADRDGKIVVVAGLDGDYLRK 139
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FGSV+D++PLAD+VTKLTARCE CGKRAFFT RKT ET+TEL+ G+D+YMPVCR+HY+S
Sbjct: 140 RFGSVLDVVPLADTVTKLTARCELCGKRAFFTFRKTSETRTELVAGADVYMPVCREHYIS 199
Query: 258 GQVVVEAARIVLESQKVQCGS 278
GQVV++AAR V + V S
Sbjct: 200 GQVVMDAARSVAKLPDVVVAS 220
>gi|116791368|gb|ABK25955.1| unknown [Picea sitchensis]
Length = 219
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 137/199 (68%), Positives = 173/199 (86%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SGEIH+I+GPMFAGKTT L+R++QAE Q GR V ++KS+KDTRY L+S+V+HDG K+PC
Sbjct: 9 SGEIHLILGPMFAGKTTALIRKMQAEIQMGRRVVLVKSDKDTRYALNSVVSHDGAKMPCW 68
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ L+SF+ K G +AY Q+DVIGIDEAQFF+DLY FC+ AAD DGKTVIVAGLDGDYLR
Sbjct: 69 AVADLASFKDKLGEEAYKQLDVIGIDEAQFFKDLYSFCQVAADKDGKTVIVAGLDGDYLR 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+SFGS +++IP+A+SV KLT+RCE CGK A FT RKT ETKTE++GG+DIYMPVCR+HYV
Sbjct: 129 KSFGSTLELIPIANSVVKLTSRCELCGKAASFTFRKTGETKTEVVGGADIYMPVCRRHYV 188
Query: 257 SGQVVVEAARIVLESQKVQ 275
+GQ+V++A + VLESQ+VQ
Sbjct: 189 NGQIVIDATKAVLESQQVQ 207
>gi|356575076|ref|XP_003555668.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 227
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 171/206 (83%), Gaps = 3/206 (1%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+S E+HVI+GPMFAGKTT LLRRI++E NVA++KS+KDTRY +DS+VTHDG+K
Sbjct: 17 LSHSFSEVHVIIGPMFAGKTTALLRRIKSELNAANNVALLKSSKDTRYAIDSVVTHDGIK 76
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
PC AL L SFR+K+G DAY ++DVIGIDEAQFF DLY+FC +AAD DGKTVIVAGLDG
Sbjct: 77 FPCWALPDLLSFREKYGEDAYQKLDVIGIDEAQFFVDLYEFCCKAADEDGKTVIVAGLDG 136
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+YLRRSFGSV+ IIPLA+SVTKLTARCE CGKRAFFTLRKTE+ +TELIGG+D+YMPVCR
Sbjct: 137 EYLRRSFGSVLHIIPLAESVTKLTARCELCGKRAFFTLRKTEQRETELIGGADVYMPVCR 196
Query: 253 QHYVSGQVVVEAARIVLESQKVQCGS 278
HY++ QV A R VLES+ + S
Sbjct: 197 LHYINSQV---AERSVLESENEKTDS 219
>gi|217072978|gb|ACJ84849.1| unknown [Medicago truncatula]
Length = 226
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/234 (64%), Positives = 182/234 (77%), Gaps = 15/234 (6%)
Query: 7 MKCLITPPFSLTPISLHLSKATTLASKS-------CFLNPATSLRNPKFIHSMVSPRPPL 59
MK ++ P FS +S + K ++ + S F N +S NP ++S +P +
Sbjct: 1 MKSILNPKFS--SLSCNFPKLSSFSLFSHPLQFSILFRNNPSSFSNPLRLNST---KPFI 55
Query: 60 FSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTR 119
+ QNR + SS SG+IHVIVGPMFAGKT++L+RRIQ+E+ GRNVA+IKS+KDTR
Sbjct: 56 PNSQNRTFQAS---SSTSGDIHVIVGPMFAGKTSSLIRRIQSESGNGRNVAIIKSSKDTR 112
Query: 120 YGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD 179
YGLDSIVTHDG KLPC AL+ LSSF+QKFG DAYDQ+DVIGIDEAQFF+DLYDFCREAAD
Sbjct: 113 YGLDSIVTHDGTKLPCWALSNLSSFKQKFGVDAYDQLDVIGIDEAQFFDDLYDFCREAAD 172
Query: 180 HDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKT 233
HDGKTVIVAGLDGDYLR+SFGSV+DIIPLADS+TKL ARCE CGK A+FTLRKT
Sbjct: 173 HDGKTVIVAGLDGDYLRKSFGSVLDIIPLADSITKLNARCEICGKNAYFTLRKT 226
>gi|255558956|ref|XP_002520501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540343|gb|EEF41914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 383
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/160 (86%), Positives = 149/160 (93%)
Query: 121 GLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH 180
GL VTHDGVKLPC AL+ LSSFRQ FGSDAY+Q+DVIGIDEAQFFEDLYDFCREAADH
Sbjct: 224 GLIDEVTHDGVKLPCVALSNLSSFRQTFGSDAYEQLDVIGIDEAQFFEDLYDFCREAADH 283
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL 240
DGKTVIVAGLDGDYLRRSFGSV+DIIPLADSVTKLTARCEFCGKRAFFTLRKTE+T+ E+
Sbjct: 284 DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEFCGKRAFFTLRKTEDTRIEV 343
Query: 241 IGGSDIYMPVCRQHYVSGQVVVEAARIVLESQKVQCGSYV 280
IGG+D+YMPVCRQHYVSGQ VVEAARIVLES+K C +YV
Sbjct: 344 IGGADVYMPVCRQHYVSGQAVVEAARIVLESEKADCVTYV 383
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 87 MFAGKTTTLLRRIQAETQKGR 107
MFAGKTTTLLRR+Q+ET GR
Sbjct: 1 MFAGKTTTLLRRVQSETDDGR 21
>gi|21554005|gb|AAM63086.1| putative thymidine kinase [Arabidopsis thaliana]
Length = 238
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 173/205 (84%), Gaps = 1/205 (0%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG +HVI+GPMF+GK+T+LLRRI++E GR+VA++KS+KDTRY DS+VTHDG+ PC
Sbjct: 30 SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
AL L SF +KFG DAY+++DVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90 ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
RSFG+V+DIIP+ADSVTKLTARCE CG +AFFTLRK +T+TELIGG+D+YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209
Query: 257 SGQVVVEAARIVLE-SQKVQCGSYV 280
+ +V++A++ VLE S K + S V
Sbjct: 210 TNHIVIKASKKVLEDSDKARAESCV 234
>gi|15231872|ref|NP_187437.1| Thymidine kinase [Arabidopsis thaliana]
gi|6466962|gb|AAF13097.1|AC009176_24 putative thymidine kinase [Arabidopsis thaliana]
gi|6648192|gb|AAF21190.1|AC013483_14 putative thymidine kinase [Arabidopsis thaliana]
gi|13878163|gb|AAK44159.1|AF370344_1 putative thymidine kinase [Arabidopsis thaliana]
gi|23296948|gb|AAN13208.1| putative thymidine kinase [Arabidopsis thaliana]
gi|332641084|gb|AEE74605.1| Thymidine kinase [Arabidopsis thaliana]
Length = 238
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 168/194 (86%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG +HVI+GPMF+GK+T+LLRRI++E GR+VA++KS+KDTRY DS+VTHDG+ PC
Sbjct: 30 SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
AL L SF +KFG DAY+++DVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90 ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
RSFG+V+DIIP+ADSVTKLTARCE CG +AFFTLRK +T+TELIGG+D+YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209
Query: 257 SGQVVVEAARIVLE 270
+ +V++A++ VLE
Sbjct: 210 TNHIVIKASKKVLE 223
>gi|297833570|ref|XP_002884667.1| hypothetical protein ARALYDRAFT_478117 [Arabidopsis lyrata subsp.
lyrata]
gi|297330507|gb|EFH60926.1| hypothetical protein ARALYDRAFT_478117 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 166/194 (85%), Gaps = 2/194 (1%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG IHVI+GPMF+GK+T+LLRRI++E GR+VA++KS+KDTRY DS+VTHDG+ PC
Sbjct: 30 SGAIHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
AL L SF +KFG DAY+++DVIGIDEAQFF DLY+FC + AD DGKTVIVAGLDGDYLR
Sbjct: 90 ALPDLMSFPEKFGQDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKTVIVAGLDGDYLR 149
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
RSFG+V+DIIP+ADSVTKLTARCE CG +AFFTLRK +T+TELIGG+D+YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209
Query: 257 SGQVVVEAARIVLE 270
+ ++A++ V E
Sbjct: 210 TNH--IKASKKVFE 221
>gi|168023713|ref|XP_001764382.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684534|gb|EDQ70936.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 196
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 161/196 (82%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IHVI+GPMFAGKTT LL+RI+ E GR V+++KS+KD RY + ++V+HDGV++PC A
Sbjct: 1 GGIHVIIGPMFAGKTTALLQRIREEADAGRRVSLVKSDKDNRYAVSAVVSHDGVQMPCVA 60
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ TL+SFR+ G +AY Q++VIGIDE+QFF+DL +FC+ AAD D KTVIVAGLDGD+LRR
Sbjct: 61 VPTLASFREHVGEEAYKQMEVIGIDESQFFDDLLEFCQGAADLDNKTVIVAGLDGDFLRR 120
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FGS +D+IPLADSVTKL ARCE C + A FT RKT +T+TE+IGG+D+YMPVCR H+VS
Sbjct: 121 RFGSALDLIPLADSVTKLHARCELCNQPAPFTFRKTVDTETEVIGGADVYMPVCRHHFVS 180
Query: 258 GQVVVEAARIVLESQK 273
GQ+ VE AR VL+ +
Sbjct: 181 GQIAVETARSVLQVHQ 196
>gi|168014892|ref|XP_001759985.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688735|gb|EDQ75110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 130/235 (55%), Positives = 170/235 (72%), Gaps = 9/235 (3%)
Query: 44 RNPKFIH--------SMVSPRPPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTL 95
RN F+ S V+PR F L++ H V G I VIVGPMFAGKTT L
Sbjct: 23 RNGNFLEQGREFEGVSSVAPRSVEF-LKSTVSHGSNFVRDNVGSIDVIVGPMFAGKTTAL 81
Query: 96 LRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQ 155
L+R++ E GR +++KS+KD RY + ++V+HDG+++PC A+ L+ FR++ G +AY Q
Sbjct: 82 LQRVRKEVDAGRKASLVKSDKDNRYAVSAVVSHDGIQMPCVAVPNLAKFRERVGEEAYKQ 141
Query: 156 VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKL 215
++VIGIDEAQFF+DL +FC+ AAD D KT+IVAGLDGD+LRR FG V+D+IPLADSVTKL
Sbjct: 142 IEVIGIDEAQFFDDLLEFCQSAADVDHKTIIVAGLDGDFLRRRFGFVLDLIPLADSVTKL 201
Query: 216 TARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLE 270
ARCE C + A FT RKT +T+TE+IGG D+YMPVCRQH+ SG+ VE AR VL+
Sbjct: 202 HARCELCNQPAPFTFRKTVDTETEVIGGVDVYMPVCRQHFFSGKNAVEIARSVLQ 256
>gi|302775496|ref|XP_002971165.1| hypothetical protein SELMODRAFT_412008 [Selaginella moellendorffii]
gi|300161147|gb|EFJ27763.1| hypothetical protein SELMODRAFT_412008 [Selaginella moellendorffii]
Length = 204
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 151/190 (79%), Gaps = 2/190 (1%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MFAGKTT LL+RIQAE GR VA++KS+KDTRYGL IV+H G K+ C A+ +LS F+
Sbjct: 1 MFAGKTTVLLQRIQAEADAGRRVALVKSDKDTRYGLGCIVSHSGKKMHCAAVASLSDFKS 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+ Y Q ++IGIDEAQFF+DL FC+ AAD DGKT+IVAGLDGD+LR+ FGS +D++
Sbjct: 61 N-KPELYAQAEIIGIDEAQFFDDLLSFCQSAADWDGKTLIVAGLDGDFLRQRFGSALDLV 119
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQVVVEAAR 266
PLADSVTKL++RCE CG+ A FT RKT++ + E+IGG+DIYMPVCR+HYV+GQ +EAAR
Sbjct: 120 PLADSVTKLSSRCEICGRAAAFTFRKTDDRRKEVIGGADIYMPVCRKHYVNGQFAMEAAR 179
Query: 267 -IVLESQKVQ 275
+VLES Q
Sbjct: 180 SVVLESHSPQ 189
>gi|302756999|ref|XP_002961923.1| hypothetical protein SELMODRAFT_403348 [Selaginella moellendorffii]
gi|300170582|gb|EFJ37183.1| hypothetical protein SELMODRAFT_403348 [Selaginella moellendorffii]
Length = 204
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 151/190 (79%), Gaps = 2/190 (1%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MFAGKTT LL+RIQAE GR VA++KS+KDTRYGL IV+H G K+ C A+ +LS F+
Sbjct: 1 MFAGKTTVLLQRIQAEADAGRRVALVKSDKDTRYGLGCIVSHSGKKMHCAAVASLSDFKS 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+ Y Q ++IGIDEAQFF+DL FC+ AAD DGKT+IVAGLDGD+LR+ FGS +D++
Sbjct: 61 H-KPELYAQAEIIGIDEAQFFDDLLSFCQSAADWDGKTLIVAGLDGDFLRQRFGSALDLV 119
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQVVVEAAR 266
PLADSVTKL++RCE CG+ A FT RKT++ + E+IGG+DIYMPVCR+HYV+GQ +EAAR
Sbjct: 120 PLADSVTKLSSRCEICGRAAAFTFRKTDDRRKEVIGGADIYMPVCRKHYVNGQFAMEAAR 179
Query: 267 -IVLESQKVQ 275
+VLES Q
Sbjct: 180 SVVLESHSPQ 189
>gi|302851464|ref|XP_002957256.1| hypothetical protein VOLCADRAFT_84037 [Volvox carteri f.
nagariensis]
gi|300257506|gb|EFJ41754.1| hypothetical protein VOLCADRAFT_84037 [Volvox carteri f.
nagariensis]
Length = 274
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 149/228 (65%), Gaps = 9/228 (3%)
Query: 36 FLNPATSLRNPKFIHSMVSPRPPLFSLQNRNLHSEASVS-----SPS---GEIHVIVGPM 87
L+ +LR+ ++ S++ R P + Q L +EAS + SP GEIH+I+GPM
Sbjct: 20 LLSRTQNLRSS-YLASLLRQRMPSWRAQAAELGTEASAAVHNTKSPRDSMGEIHLIMGPM 78
Query: 88 FAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQK 147
FAGKTT LL+ ++ G+ V V+KS DTRY D +VTH G +LPC +L+ L S R++
Sbjct: 79 FAGKTTRLLQHVREAQSAGQRVVVVKSAVDTRYSTDHVVTHTGERLPCISLSRLGSLREQ 138
Query: 148 FGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIP 207
G+ YD+VDV+ +DEAQF +DL + A+ DGK VIVAGL+GD+ R+ FG +++++P
Sbjct: 139 LGTAEYDKVDVVAVDEAQFIDDLVESVLHTAERDGKVVIVAGLNGDFRRQRFGQLLELVP 198
Query: 208 LADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
LAD V KL RC FC K + FTLR T+ L+GG++ Y PVCR+HY
Sbjct: 199 LADRVDKLEGRCSFCNKPSHFTLRIAASTRQALVGGTESYAPVCRRHY 246
>gi|307105769|gb|EFN54017.1| hypothetical protein CHLNCDRAFT_25389 [Chlorella variabilis]
Length = 230
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 136/183 (74%), Gaps = 4/183 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I ++VGPMFAGKTT LLRR+ G +VAV+KSNKD RY +VTH+G+K PC
Sbjct: 28 NGAIEIVVGPMFAGKTTELLRRVARYEAAGLSVAVVKSNKDDRYCAAHVVTHNGLKRPCF 87
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A +L++F++ AYD VI +DEAQFF DL +FC AADH+ K +++AGLDGD+ R
Sbjct: 88 ATPSLAAFKEAA-GAAYDAFQVIAVDEAQFFPDLKEFCAHAADHEHKRLLLAGLDGDFQR 146
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR---AFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG V+D++P+ADSVTKLTA C+FC +R A F+LR T +++ E++GG+D+Y PVCR+
Sbjct: 147 QRFGQVLDLLPMADSVTKLTAHCKFCDQRRVAAVFSLRITADSRQEVVGGADVYAPVCRR 206
Query: 254 HYV 256
HYV
Sbjct: 207 HYV 209
>gi|159469903|ref|XP_001693099.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277357|gb|EDP03125.1| predicted protein [Chlamydomonas reinhardtii]
Length = 195
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 123/184 (66%), Gaps = 5/184 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++H+IVGPMFAGKTT L++R++ GR V+KS DTRY +D++VTHDGV+ PC
Sbjct: 12 GQLHLIVGPMFAGKTTRLIQRVREAEAAGRRTVVVKSAVDTRYAVDAVVTHDGVRAPCVP 71
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L+ L R G Y V+ IDEAQF DL + +A + DGKTV VAGL GD+ R
Sbjct: 72 LSRLGDLRAALGEAEYAATQVVAIDEAQFIGDLREAVLQATEADGKTVYVAGLSGDFRRD 131
Query: 198 SFGSVIDIIPLADSVTKLTARCEFC---GKR--AFFTLRKTEETKTELIGGSDIYMPVCR 252
+FG + ++PLAD+V KL+ RC FC G+R + FTLR T+ EL+GG++ Y PVCR
Sbjct: 132 NFGQISQLLPLADNVEKLSGRCTFCEQQGRRSASHFTLRIAASTQQELVGGAEAYAPVCR 191
Query: 253 QHYV 256
+HYV
Sbjct: 192 EHYV 195
>gi|384252555|gb|EIE26031.1| thymidine kinase [Coccomyxa subellipsoidea C-169]
Length = 179
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 119/171 (69%), Gaps = 1/171 (0%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MFAGKT+ LLRR++ GR VAV+KS+ DTRY +V+HDG C A ++L R+
Sbjct: 1 MFAGKTSELLRRVEQHEAAGRKVAVVKSSVDTRYHATRVVSHDGNSKVCFAASSLGELRR 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+ G D Y + +VI IDEAQF DL +FC AAD D K +++AGLDGD+ R+ FG V+D++
Sbjct: 61 QLG-DKYLEYNVIAIDEAQFLPDLLEFCTAAADLDHKHIVIAGLDGDFKRQRFGQVLDMV 119
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
+ADSVTKL +C +C ++A F+LR + + L+GG+D Y PVCRQHYVS
Sbjct: 120 SVADSVTKLAGKCAYCSEQALFSLRIAADERQALVGGADKYAPVCRQHYVS 170
>gi|412992362|emb|CCO20075.1| thymidine kinase [Bathycoccus prasinos]
Length = 310
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 124/194 (63%), Gaps = 5/194 (2%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRI-QAETQKGRNVAVIKSNKDTRYGLDSIV 126
SE G +H+I+GPMFAGKTT LL R+ Q E NV ++KS+KDTRY D +V
Sbjct: 118 ESEEETQKGVGSVHLILGPMFAGKTTRLLERVKQLEESVSANVLLLKSDKDTRYAKDKVV 177
Query: 127 THDGVKLPCCALTTLS--SFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKT 184
THDG C + +L + G +++ DV+ +DEAQF +LY+FCR AAD K
Sbjct: 178 THDGRGRECFPVKSLELEVVVKTVGERKWNECDVVAVDEAQFLTNLYEFCRVAADEHNKI 237
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-ETKTELIGG 243
V+VAGL+GD+ R +FG V + +PL DSVTKLTA+C+ CG+ A F+ R EL+GG
Sbjct: 238 VLVAGLNGDFKRETFGEVQETLPLCDSVTKLTAKCK-CGRPALFSKRIVNVGDGQELVGG 296
Query: 244 SDIYMPVCRQHYVS 257
+D Y+P CR+ +++
Sbjct: 297 ADKYLPACRRCFLN 310
>gi|303273274|ref|XP_003055998.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462082|gb|EEH59374.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 208
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 121/192 (63%), Gaps = 4/192 (2%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++S +GEIH+I GPMF+GKTT LL R+ E G V+++KS +D RY D IVTHDG+
Sbjct: 11 NISKNTGEIHLITGPMFSGKTTELLERVSQEEALGLVVSLVKSFEDFRYSCDHIVTHDGI 70
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
C ++ L+ R G + +VD+ IDEAQF DL FC AAD + K +I AGL+
Sbjct: 71 LRTCFSVAKLNEIRSTLGDAEWRRVDIFAIDEAQFLPDLPRFC-AAADSEKKKIIFAGLE 129
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKT--ELIGGSDIYM 248
GD+ R FG ++D++PL DS+ KL+A+C C R A FT R + E T + IGGSD Y
Sbjct: 130 GDFRREQFGKLLDLLPLCDSIFKLSAKCCSCNIRPATFTSRISPENNTAQQCIGGSDTYQ 189
Query: 249 PVCRQHYVSGQV 260
VCR +V ++
Sbjct: 190 TVCRSCFVRSKL 201
>gi|255070469|ref|XP_002507316.1| predicted protein [Micromonas sp. RCC299]
gi|226522591|gb|ACO68574.1| predicted protein [Micromonas sp. RCC299]
Length = 221
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S+ GEIH+I+GPMF+GK+T L++R++ + G ++ S++D RY +V+H G
Sbjct: 29 STRRGEIHMIIGPMFSGKSTALIQRVKEDEAAGLQAQMVNSSRDVRYSSFEVVSHGGATR 88
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
PC + L G + + +VDV+ IDEAQFF DL FC AA+ K VIVAGL GD
Sbjct: 89 PCHCIEKLWDIPILLGFEHFSRVDVLAIDEAQFFPDLASFCISAAEDHHKKVIVAGLSGD 148
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKT-ELIGGSDIYMPVC 251
+ R+ FG + D+IP+ADSV KLT+ C C F+LR T + ELIGG D Y PVC
Sbjct: 149 FRRKRFGQISDLIPIADSVLKLTSNCAMCDMTSGLFSLRTTSNWENQELIGGPDSYKPVC 208
Query: 252 RQHYVSG 258
R Y S
Sbjct: 209 RSCYTSA 215
>gi|157869042|ref|XP_001683073.1| putative thymidine kinase [Leishmania major strain Friedlin]
gi|68223956|emb|CAJ04639.1| putative thymidine kinase [Leishmania major strain Friedlin]
Length = 284
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 117/185 (63%), Gaps = 8/185 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC-C 136
G I +I+GPMFAGKTT L+RR++ E R+ VIK +KDTRY ++ +HD + L
Sbjct: 4 GRIELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQA 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A++ L+ R D + + DV+ IDE QFF DL DFC AAD GK V+V+ LDGDY R
Sbjct: 64 AVSQLTEVR-----DTWKRFDVLAIDEGQFFSDLVDFCNTAADA-GKVVMVSALDGDYRR 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + +++P ++V KLTA C C ++ A FT R + ELIGG+D+Y+ CR+ Y
Sbjct: 118 KPFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVNVEQQELIGGADMYIATCRECY 177
Query: 256 VSGQV 260
Q+
Sbjct: 178 SKQQL 182
>gi|443712089|gb|ELU05548.1| hypothetical protein CAPTEDRAFT_182750 [Capitella teleta]
Length = 233
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 113/183 (61%), Gaps = 7/183 (3%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-GLDSIVTHD 129
A++ SPSG+I VI GPMF+GKTT L+RR++ + +IK DTRY G + + THD
Sbjct: 11 ANLPSPSGQIQVIFGPMFSGKTTELVRRMKRFQIANYSCLLIKYANDTRYTGDEGLATHD 70
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
+P T L K ++ DVIG+DE QFF D +FC EA + GKTVIVA
Sbjct: 71 KQVVPAVPATKLKDLWTK-----AEEADVIGVDEGQFFPDTVEFC-EAMANKGKTVIVAA 124
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LDG + R FG ++ ++PLA+SV KLTA C C A FT RK E K E+IGG+D+Y+
Sbjct: 125 LDGTFQREGFGDILKLVPLAESVIKLTAVCMQCYGEAAFTKRKGHEMKLEVIGGADMYLS 184
Query: 250 VCR 252
CR
Sbjct: 185 ACR 187
>gi|328866111|gb|EGG14497.1| hypothetical protein DFA_12272 [Dictyostelium fasciculatum]
Length = 215
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 117/194 (60%), Gaps = 12/194 (6%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD-- 129
S + PSG I VI GPMF+GK+T LLRRI+ +T + VIK DTRY ++ + THD
Sbjct: 3 SFNVPSGSIEVIFGPMFSGKSTELLRRIRRQTIANKKCLVIKYQGDTRYSVEKMSTHDHQ 62
Query: 130 -GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
+PC L + D Q DVIG+DE QFF D+ FC A+ GK VIVA
Sbjct: 63 MWAAVPCDKLENVQL-------DCL-QFDVIGVDEGQFFPDIVSFCETMANL-GKIVIVA 113
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
LDG + RR FGSV+++IPLA++VTKL A C C + A F+ R T T+ +LIGG++ Y+
Sbjct: 114 ALDGTFQRRPFGSVLELIPLAENVTKLHAVCMICYQDAAFSKRMTSSTEVQLIGGAESYI 173
Query: 249 PVCRQHYVSGQVVV 262
VCR Y + +
Sbjct: 174 SVCRTCYAKSSIAM 187
>gi|18640149|ref|NP_570223.1| SPV063 thymidine kinase [Swinepox virus]
gi|335134|gb|AAA47894.1| thymidine kinase [Swinepox virus]
gi|18448556|gb|AAL69802.1| SPV063 thymidine kinase [Swinepox virus]
Length = 181
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 6/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R + N VIK +KD RYG D++ THD + A
Sbjct: 8 GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYIS--A 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++T S F K D D VD++GIDE QFF D+ +FC A+ GK VIVA LDG Y R+
Sbjct: 66 VSTDSLFDIK---DTLDDVDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 121
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FG+++++IPL++ VTKL A C C + A F+ R ++E + ELIGG + Y+ VCR Y++
Sbjct: 122 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCYLT 181
>gi|125459|sp|P23335.1|KITH_SWPVK RecName: Full=Thymidine kinase
gi|335130|gb|AAA47891.1| thymidine kinase [Swinepox virus]
Length = 177
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 6/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R + N VIK +KD RYG D++ THD + A
Sbjct: 4 GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYIS--A 61
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++T S F K D D VD++GIDE QFF D+ +FC A+ GK VIVA LDG Y R+
Sbjct: 62 VSTDSLFDIK---DTLDDVDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 117
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FG+++++IPL++ VTKL A C C + A F+ R ++E + ELIGG + Y+ VCR Y++
Sbjct: 118 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCYLT 177
>gi|146085975|ref|XP_001465409.1| putative thymidine kinase [Leishmania infantum JPCM5]
gi|398014944|ref|XP_003860662.1| thymidine kinase, putative [Leishmania donovani]
gi|134069507|emb|CAM67830.1| putative thymidine kinase [Leishmania infantum JPCM5]
gi|322498884|emb|CBZ33957.1| thymidine kinase, putative [Leishmania donovani]
Length = 284
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 8/185 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC-C 136
G I +I+GPMFAGKTT L+RR++ E R+ VIK +KDTRY ++ +HD + L
Sbjct: 4 GRIELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQA 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A++ L+ R D + + DV+ IDE QFF DL +FC AAD GK V+V+ LDGDY R
Sbjct: 64 AVSQLTEVR-----DTWKRFDVLAIDEGQFFSDLVNFCNTAADA-GKVVMVSALDGDYRR 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + +++P ++V KLTA C C ++ A FT R + ELIGG+D+Y+ CR+ Y
Sbjct: 118 KPFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVNVEQQELIGGADMYIATCRECY 177
Query: 256 VSGQV 260
Q+
Sbjct: 178 SKQQL 182
>gi|403367952|gb|EJY83804.1| Thymidine kinase [Oxytricha trifallax]
Length = 252
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 117/198 (59%), Gaps = 8/198 (4%)
Query: 62 LQNRNLHSEA--SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTR 119
LQ R L S A + P G I +I+GPMFAGK+T LLRR++ G IK DTR
Sbjct: 17 LQARTLSSVALSAHHPPRGRIELIIGPMFAGKSTELLRRVKRHEIAGSKCLRIKFAGDTR 76
Query: 120 YGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD 179
Y DSI THD + + LS+ + + Q DVIGIDE QFF D+ +F E
Sbjct: 77 YSDDSIATHDRQTQKAISASVLSTI-----GEMWKQYDVIGIDEGQFFPDVIEFA-EKTS 130
Query: 180 HDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE 239
+DGK VI++ LDG +LR F +++++IP A+ V KL A C+ C + A+FT R E +
Sbjct: 131 NDGKVVIISALDGTFLRTGFENILNLIPKAEKVKKLAAICKICNQNAYFTFRTILEETIQ 190
Query: 240 LIGGSDIYMPVCRQHYVS 257
LIGG + Y+P+CR+ + S
Sbjct: 191 LIGGDEAYIPLCRECFNS 208
>gi|154337224|ref|XP_001564845.1| putative thymidine kinase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061883|emb|CAM38921.1| putative thymidine kinase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 283
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 116/184 (63%), Gaps = 6/184 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR++ E + VIK +KDTRY ++ +HD + L A
Sbjct: 4 GRIELIIGPMFAGKTTELMRRVKREIHARHSCFVIKYSKDTRYDEHNVASHDQLMLR--A 61
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+S ++ D + + DV+ IDE QFF DL DFC AAD GK V+V+ LDGDY R+
Sbjct: 62 QAAVSQLKEV--QDTWQRFDVLAIDEGQFFSDLVDFCNTAADA-GKVVMVSALDGDYRRK 118
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + +++P ++V KLTA C C ++ A FT R + + ELIGG+D+Y+ CR+ Y
Sbjct: 119 PFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVKVEQQELIGGADMYIATCRECYT 178
Query: 257 SGQV 260
Q+
Sbjct: 179 KQQL 182
>gi|407407001|gb|EKF31022.1| thymidine kinase, putative [Trypanosoma cruzi marinkellei]
Length = 270
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 115/181 (63%), Gaps = 6/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR++ E R+ VIK ++D RY +S+ +HD KL A
Sbjct: 9 GHIELIIGPMFAGKTTELMRRVRRELFAKRSCYVIKHSRDARYSRESVSSHD--KLLLGA 66
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++ R+ DA+ DV+ +DE QFF D+ +FC AAD GKTVIV+ LDGDY R+
Sbjct: 67 TAAVAELREV--GDAWRPYDVVAVDEGQFFPDIVEFCNTAADV-GKTVIVSALDGDYRRQ 123
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + +IPLA+SV KLTA C C R A FT R K ELIGG+D+Y+ CR +V
Sbjct: 124 PFDGICRLIPLAESVKKLTAVCMECHCRSASFTYRTVSSEKRELIGGADMYIAACRTCFV 183
Query: 257 S 257
+
Sbjct: 184 N 184
>gi|401421777|ref|XP_003875377.1| putative thymidine kinase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491614|emb|CBZ26887.1| putative thymidine kinase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 284
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 8/185 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC-C 136
G I +I+GPMFAGKTT L+RR++ E R+ VIK +KDTRY ++ +HD + L
Sbjct: 4 GRIELIIGPMFAGKTTELMRRVKREIYARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQA 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A++ L+ + D + + DV+ IDE QFF DL DFC AAD GK V+V+ LDGDY R
Sbjct: 64 AVSRLTEVQ-----DTWKRFDVLAIDEGQFFSDLVDFCNTAADA-GKVVMVSALDGDYRR 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + +++P ++V KLTA C C ++ A FT R + ELIGG+D+Y+ CR+ Y
Sbjct: 118 KPFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVNVEQQELIGGADMYIATCRECY 177
Query: 256 VSGQV 260
Q+
Sbjct: 178 SKQQL 182
>gi|156381164|ref|XP_001632136.1| predicted protein [Nematostella vectensis]
gi|156219187|gb|EDO40073.1| predicted protein [Nematostella vectensis]
Length = 212
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Query: 65 RNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS 124
++LH S+S G+I VI GPMF+GKTT LLRRI+ +IK KD RY +
Sbjct: 10 QHLHRHHSISECPGQIQVIFGPMFSGKTTELLRRIKRYQVANHKCLLIKYAKDIRYDEEG 69
Query: 125 IVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKT 184
+ THD L T L + K + + VIGIDE QFF D+ +F E A +GKT
Sbjct: 70 VATHDRQILRATPCTVLEDLKNKAINHS-----VIGIDEGQFFPDIVEFSEEMAS-EGKT 123
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
+I+A LDG + R++FG+++ ++PLA+SV KL+A C C K A FT R + + E+IGG+
Sbjct: 124 IIIAALDGTFQRKAFGNILHLVPLAESVVKLSAVCMNCFKDASFTKRLGYDKRVEVIGGA 183
Query: 245 DIYMPVCRQHYVSGQV 260
D YM VCR+ Y +V
Sbjct: 184 DKYMSVCRECYNLAEV 199
>gi|71667264|ref|XP_820583.1| thymidine kinase [Trypanosoma cruzi strain CL Brener]
gi|70885933|gb|EAN98732.1| thymidine kinase, putative [Trypanosoma cruzi]
Length = 355
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 114/181 (62%), Gaps = 6/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR++ E R+ VIK ++D RY +S+ +HD KL A
Sbjct: 94 GHIELIIGPMFAGKTTELMRRVRRELFAKRSCYVIKHSRDARYSRESVSSHD--KLLLGA 151
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++ R+ DA+ DV+ +DE QFF D+ FC AAD GKTVIV+ LDGDY R+
Sbjct: 152 TAAVAELREV--GDAWRPFDVVAVDEGQFFPDIVGFCNTAADA-GKTVIVSALDGDYRRQ 208
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + +IPLA+SV KLTA C C R A FT R K ELIGG+D+Y+ CR +V
Sbjct: 209 PFDGICRLIPLAESVKKLTAVCMECHCRSASFTYRTVSSEKRELIGGADMYIAACRTCFV 268
Query: 257 S 257
+
Sbjct: 269 T 269
>gi|407838091|gb|EKF99933.1| thymidine kinase, putative [Trypanosoma cruzi]
Length = 313
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 114/181 (62%), Gaps = 6/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR++ E R+ VIK ++D RY +S+ +HD KL A
Sbjct: 52 GHIELIIGPMFAGKTTELMRRVRRELFAKRSCYVIKHSRDARYSRESVSSHD--KLLLGA 109
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++ R+ DA+ DV+ +DE QFF D+ FC AAD GKTVIV+ LDGDY R+
Sbjct: 110 TAAVAELREV--GDAWRPFDVVAVDEGQFFPDIVGFCNTAADA-GKTVIVSALDGDYRRQ 166
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + +IPLA+SV KLTA C C R A FT R K ELIGG+D+Y+ CR +V
Sbjct: 167 PFDGICRLIPLAESVKKLTAVCMECHCRSASFTYRTVSSEKRELIGGADMYIAACRTCFV 226
Query: 257 S 257
+
Sbjct: 227 T 227
>gi|157384637|gb|ABV49611.1| thymidine kinase [Leishmania donovani]
Length = 284
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 115/185 (62%), Gaps = 8/185 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC-C 136
G I +I+GPMFAGKTT L+RR++ E R+ VIK +KDTRY ++ +HD + L
Sbjct: 4 GRIELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQA 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A + L+ R D + + DV+ IDE QFF DL +FC AAD GK V+V+ LDGDY R
Sbjct: 64 AASQLTEVR-----DTWKRFDVLAIDEGQFFSDLVNFCNTAADA-GKVVMVSALDGDYRR 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++P ++V KLTA C C ++ A FT R + ELIGG+D+Y+ CR+ Y
Sbjct: 118 KPFGQICKLVPYCEAVDKLTAVCMMCHEQPACFTRRTVNVEQQELIGGADMYIATCRECY 177
Query: 256 VSGQV 260
Q+
Sbjct: 178 SKQQL 182
>gi|340368544|ref|XP_003382811.1| PREDICTED: thymidine kinase, cytosolic-like [Amphimedon
queenslandica]
Length = 226
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI+GPMF+GKTT L+RR++ ++ +IK +KD RY + + THD A
Sbjct: 18 GQIQVILGPMFSGKTTELMRRMRRYQVANQSCLIIKYSKDDRYDKNGVATHDKQVSSAMA 77
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L ++ G VIGIDE QFF DL +FC + A+ GKTVIVA LDG + R+
Sbjct: 78 ATKLYELKKTVG-----DYGVIGIDEGQFFPDLVEFCEDMANA-GKTVIVAALDGTFQRK 131
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+FGSV+++IP+A+SV KL A C C A FT R E + E+IGG+D YM VCR Y
Sbjct: 132 AFGSVLNLIPMAESVVKLKAVCMMCFNDAAFTKRLGSEKEIEVIGGADKYMAVCRTCY 189
>gi|71407675|ref|XP_806291.1| thymidine kinase [Trypanosoma cruzi strain CL Brener]
gi|70869991|gb|EAN84440.1| thymidine kinase, putative [Trypanosoma cruzi]
Length = 415
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 114/181 (62%), Gaps = 6/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR++ E R+ VIK ++D RY +S+ +HD KL A
Sbjct: 154 GHIELIIGPMFAGKTTELMRRVRRELFARRSCYVIKHSRDARYSRESVSSHD--KLLLGA 211
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++ R+ DA+ DV+ +DE QFF D+ FC AAD GKTVIV+ LDGDY R+
Sbjct: 212 TAAVAELREV--GDAWCPYDVVAVDEGQFFPDIVAFCNTAADA-GKTVIVSALDGDYRRQ 268
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + +IPLA+SV KLTA C C R A FT R K ELIGG+D+Y+ CR +V
Sbjct: 269 PFDGICRLIPLAESVKKLTAVCMECHCRSASFTYRTVSSEKRELIGGADMYIAACRTCFV 328
Query: 257 S 257
+
Sbjct: 329 T 329
>gi|405971403|gb|EKC36242.1| Thymidine kinase, cytosolic [Crassostrea gigas]
Length = 230
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 6/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I +I GPMF+GKTT L+RR++ V+K +KD RY + I THD L
Sbjct: 19 GQIQLIFGPMFSGKTTELMRRMKRYQIANYKCLVVKYSKDDRYDKEGIATHDRQTLAAIP 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L + + + DVIGIDE QFF+D+ +FC E A+ GKTVIVA LDG + ++
Sbjct: 79 ADVLDQVKSQ-----AENFDVIGIDEGQFFKDVVEFCDEMAER-GKTVIVAALDGTFQKK 132
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FG +++++PLA+SV KLTA C C FT RK ET E+IGG+++Y+ VCR+ + S
Sbjct: 133 GFGDILNLVPLAESVIKLTAVCMSCNHEGSFTKRKGMETAVEVIGGAEMYLAVCRRCFYS 192
>gi|313219539|emb|CBY30462.1| unnamed protein product [Oikopleura dioica]
gi|313226348|emb|CBY21492.1| unnamed protein product [Oikopleura dioica]
Length = 244
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 106/175 (60%), Gaps = 6/175 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I +I+GPMF+GK+T LLRR++ V+K N+D RY + THDG K+
Sbjct: 23 GQIQLIIGPMFSGKSTELLRRLRRSQNACFKCLVVKFNEDDRYSDLDMATHDGQKVAAIK 82
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L DA DVIG+DE QFFEDL +FC A+ GKTVIVA LDGDY R+
Sbjct: 83 AAKLDDV-----YDAAKDFDVIGVDEGQFFEDLLEFCENLAN-SGKTVIVAALDGDYKRQ 136
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
F I +IPL++SVTKLTA C C A F+ R +T+ ++IGG + YM VCR
Sbjct: 137 PFEKTIQLIPLSESVTKLTAICMNCRADAAFSRRLGAQTQQKVIGGEEKYMAVCR 191
>gi|342183833|emb|CCC93313.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 637
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 7/183 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S SG I V++GPMFAGKTT L+ R+ + + VIK ++D RY ++I THD L
Sbjct: 392 SPQSGRIEVVIGPMFAGKTTELMSRVNRYSLARYSCYVIKYSEDKRYSKENISTHDRRTL 451
Query: 134 PC-CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
P ++T LS +K+ DVI +DE QFF D+ +FC AA+ GK VIVA LDG
Sbjct: 452 PATVSVTKLSEVGEKWC-----DYDVIAVDEGQFFPDILEFCSMAANA-GKKVIVAALDG 505
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY F + +IP A+SVTKL+A C CG A++T R + + ELIGG+D+Y+ CR
Sbjct: 506 DYRNEPFEDIAKLIPAAESVTKLSAVCMLCGCDAYYTHRTVQSEQRELIGGADMYIATCR 565
Query: 253 QHY 255
Y
Sbjct: 566 ACY 568
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 104/180 (57%), Gaps = 6/180 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S SG I +++GPMFAGKTT L+ R+ + VIK +KD RY + I THD L
Sbjct: 4 SPQSGRIELVIGPMFAGKTTELMSRVNRNFLASHSCYVIKYSKDMRYSKEVISTHDRRAL 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
+ +S + D + + DVI +DE QFF+D+ +FC AA+ GK VIVA LD +
Sbjct: 64 ----IIAVSVGKLGEVGDKWHEYDVIAVDEGQFFQDILEFCSMAANA-GKKVIVAALDNE 118
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y F ++ +IP A+SVTKL+A C C A +T R + + ELIGG+D+Y CR
Sbjct: 119 YRNAPFENIAKLIPAAESVTKLSAVCMSCKSCDAHYTHRTVQSEQRELIGGADMYNATCR 178
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 105/182 (57%), Gaps = 8/182 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I +++GPMFAGKTT L+ R+ ++ VIK +KD RY + I THD L
Sbjct: 200 SGRIELVIGPMFAGKTTELMSRVNRNYLASQSCYVIKYSKDVRYSKEIISTHDQRTL--- 256
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T+S + +A+ + DVI +D QFF D+ FC AA+ GK VIV+ LDGDY
Sbjct: 257 -TATVSVSKLSEIGNAWCEHDVIAVDGGQFFPDILQFCSMAANA-GKKVIVSALDGDYRN 314
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR---AFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F + +IP A+SVTKL+A C C + A +T R + + ELIGG+D+Y+ CR
Sbjct: 315 EPFEDIAKLIPAAESVTKLSAVCMSCNLQSCDACYTHRTVQSEQRELIGGADMYIATCRA 374
Query: 254 HY 255
Y
Sbjct: 375 CY 376
>gi|226958341|ref|NP_033413.2| thymidine kinase, cytosolic isoform 1 [Mus musculus]
gi|172046775|sp|P04184.3|KITH_MOUSE RecName: Full=Thymidine kinase, cytosolic
gi|252871|gb|AAB22782.1| thymidine kinase, TK {EC 2.7.1.21} [mice, Peptide, 233 aa]
gi|298946|gb|AAB26001.1| thymidine kinase [Mus sp.]
gi|15126565|gb|AAH12215.1| Thymidine kinase 1 [Mus musculus]
gi|26352894|dbj|BAC40077.1| unnamed protein product [Mus musculus]
gi|74226516|dbj|BAE23931.1| unnamed protein product [Mus musculus]
gi|148702690|gb|EDL34637.1| mCG19309, isoform CRA_b [Mus musculus]
gi|737917|prf||1923398A thymidine kinase
Length = 233
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 16/188 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC E ++GKTVIV
Sbjct: 71 NTMDALPACMLRDVT--QESLG------VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|202079|gb|AAA40454.1| thymidine kinase [Mus musculus]
Length = 233
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 16/188 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC E ++GKTVIV
Sbjct: 71 NTMDALPACMLRDVT--QEALG------VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|290973965|ref|XP_002669717.1| thymidine kinase [Naegleria gruberi]
gi|284083268|gb|EFC36973.1| thymidine kinase [Naegleria gruberi]
Length = 275
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 122/203 (60%), Gaps = 15/203 (7%)
Query: 61 SLQNRNLHSEASVSSP---SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKD 117
S N LH P +G+I +I G MFAGKT+ LLRR++ + ++K D
Sbjct: 43 STPNSALHLSNQYGFPLNYNGQIQLIFGNMFAGKTSELLRRLRRYQYAQKETVLVKYIND 102
Query: 118 TRYGLDSIVTHDGVK---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFC 174
RY +++ THD V+ +P L ++S Q G VIGIDE QFF DL +FC
Sbjct: 103 DRYSKENVSTHDLVQQKAIPTDRLEKIAS--QLLG------YHVIGIDEGQFFPDLVEFC 154
Query: 175 REAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE 234
EAA + GK VIV+ LDG + R+ FG+V+ ++P+A+SV KL A C CGK A F+ R T+
Sbjct: 155 -EAAANGGKIVIVSALDGTFQRKQFGNVLSLVPMAESVVKLKAVCMVCGKDAAFSKRITD 213
Query: 235 ETKTELIGGSDIYMPVCRQHYVS 257
E +TE+IGGSD Y+ CR+ Y++
Sbjct: 214 EQQTEVIGGSDKYIATCRKCYMT 236
>gi|321461976|gb|EFX73003.1| hypothetical protein DAPPUDRAFT_200671 [Daphnia pulex]
Length = 254
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 109/186 (58%), Gaps = 9/186 (4%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL---DSIVTHD 129
++ P G+I +I GPMF+GKTT L+RR++ ++K KD RY + THD
Sbjct: 10 LNHPKGQIQIIFGPMFSGKTTELIRRLKRYEVANHKCLIVKYAKDLRYESKCGQGVATHD 69
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
A T LSS + D VIGIDE QFF D+ +FC EA + GK V+VA
Sbjct: 70 QQTRAAVAATVLSSI-----AHLADSCSVIGIDEGQFFPDVVEFC-EAMANAGKIVVVAA 123
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LDG Y R FG+ ++++PLA++V KLTA C C A FT R ET+ ELIGGS+ YM
Sbjct: 124 LDGTYQRSGFGNFLNLVPLAENVVKLTAVCMRCYGEAAFTQRLGSETEVELIGGSEKYMA 183
Query: 250 VCRQHY 255
VCR+ Y
Sbjct: 184 VCRECY 189
>gi|198423054|ref|XP_002127533.1| PREDICTED: similar to thymidine kinase 1, soluble [Ciona
intestinalis]
Length = 222
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 111/190 (58%), Gaps = 10/190 (5%)
Query: 66 NLHSEASVSSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL 122
+LH + SPS G+I VI+GPMF+GK+T LLRRI+ R VIK D RY
Sbjct: 3 SLHLPSYCHSPSKNRGQIQVILGPMFSGKSTELLRRIRRYQITERKCLVIKYAHDNRYSD 62
Query: 123 DSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDG 182
DS+ THD T L + + D VIG+DE QFF D+ FC ++ G
Sbjct: 63 DSMATHDKQITKAVKATHLLALKN------LDSFSVIGVDEGQFFPDIVQFC-DSMSSSG 115
Query: 183 KTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIG 242
KTVIVA LDG + R+ FG+V+ +IP+A++V KL+A C C + A FT R ET E+IG
Sbjct: 116 KTVIVAALDGTFERKPFGAVLGLIPIAETVVKLSAVCNSCHREAAFTKRLGLETAVEVIG 175
Query: 243 GSDIYMPVCR 252
G+D YM CR
Sbjct: 176 GTDKYMAACR 185
>gi|202073|gb|AAA40451.1| cytosolic thymidine kinase [Mus musculus]
Length = 233
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 16/188 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC E ++GKTVIV
Sbjct: 71 NTMDALPACMLRDVT--QELLG------VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|340056694|emb|CCC51030.1| putative thymidine kinase [Trypanosoma vivax Y486]
Length = 272
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 5/181 (2%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P GE+ +I+GPM+AGKTT L++R+ E ++K +KDTRY S+ TH+ KL
Sbjct: 33 PCGELQLIIGPMYAGKTTELMKRVTREIYAHHKCYIVKHSKDTRYCTQSLCTHNMAKL-- 90
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ T+S + D + + DV+ +DE QFF D+ +F ++ AD GK VIV+ LD DYL
Sbjct: 91 --VATISVTKLSDIGDVWKEYDVVAVDEGQFFSDVLEFSKKVADA-GKKVIVSALDSDYL 147
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R F + ++ LADSVTKLTA C C A FT R + + EL+G +Y+ VCR+ Y
Sbjct: 148 REPFRDICLLVGLADSVTKLTAVCTVCSHDASFTHRVVDNQERELVGSVGMYIAVCRRCY 207
Query: 256 V 256
+
Sbjct: 208 I 208
>gi|261332022|emb|CBH15015.1| thymidine kinase, putative [Trypanosoma brucei gambiense DAL972]
Length = 455
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 6/203 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR+Q R+ +IK DTRY +I +HD L A
Sbjct: 205 GRIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIIKYTGDTRYSEGAITSHDQRALT--A 262
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++S+ D + + DVI +DE QFF D+ FC +AAD GK VIV+ LD DYL+
Sbjct: 263 NVSVSNLHDV--GDEWRKYDVIAVDEGQFFPDVAAFCSKAAD-SGKVVIVSALDADYLQE 319
Query: 198 SFGSVIDIIPLADSVTKLTARCEFC-GKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + ++ ADSV KL+A C C ++A FT R + + +L+GGSD+YM VCR Y
Sbjct: 320 PFEEICLLVSRADSVVKLSAVCMECHNRKASFTYRTVKSDERKLVGGSDMYMSVCRSCYE 379
Query: 257 SGQVVVEAARIVLESQKVQCGSY 279
+ + +V+ + + + GSY
Sbjct: 380 TKRNMVQTEKYIYSCVGINEGSY 402
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC-C 136
G I +I+GPMFAGKTT L+RR+Q R+ +I ++++ Y + THD + L
Sbjct: 6 GNIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANV 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ LS D + DVI +D QFF D+ FC AA+ +GKTVIV+ LD D
Sbjct: 65 SIAKLSEV-----CDEWRDYDVIAVDNGQFFPDVVGFCARAAN-EGKTVIVSALDVDCRE 118
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F V ++P A+SV KL+A C C + AF T R E + EL GG+D+Y+ VCR Y
Sbjct: 119 TPFDEVCRLVPRAESVLKLSAVCMKCHEHDAFLTYRTIESNERELYGGADMYLAVCRWCY 178
>gi|53933295|ref|NP_990229.1| thymidine kinase, cytosolic [Gallus gallus]
gi|125427|sp|P04047.1|KITH_CHICK RecName: Full=Thymidine kinase, cytosolic
gi|212776|gb|AAA49096.1| thymidine kinase [Gallus gallus]
Length = 224
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 114/188 (60%), Gaps = 12/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S P G+I VI GPMF+GK+T L+RR++ ++K KDTRY + THD
Sbjct: 12 GSPGRPRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDR 71
Query: 131 VKL---PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
+ P CAL + +++ GS VIGIDE QFF D+ +FC + A+ GKTVIV
Sbjct: 72 NTMEARPACALQDV--YQEALGSA------VIGIDEGQFFPDIVEFCEKMAN-TGKTVIV 122
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KL A C C + A +T R E + E+IGG+D Y
Sbjct: 123 AALDGTFQRKAFGSILNLVPLAESVVKLNAVCMECYREASYTKRLGAEREVEVIGGADKY 182
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 183 HSVCRACY 190
>gi|12085049|ref|NP_073451.1| 66R protein [Yaba-like disease virus]
gi|157939689|ref|YP_001497061.1| thymidine kinase [Tanapox virus]
gi|12056225|emb|CAC21304.1| 66R protein [Yaba-like disease virus]
gi|146746405|gb|ABQ43541.1| thymidine kinase [Tanapox virus]
gi|146746561|gb|ABQ43696.1| thymidine kinase [Tanapox virus]
Length = 183
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 114/183 (62%), Gaps = 7/183 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
++S SG I +I+GPMF+GK+T L+R ++ VIK +KDTRYG +VTHD
Sbjct: 1 MTSKSGHIQIILGPMFSGKSTELIRILKRYQIARYTCFVIKYSKDTRYG-KGLVTHDNNS 59
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+P + +LS + D + DVIGIDE QFF D+ +FC A+ DGK VIVA LDG
Sbjct: 60 IPAIPVNSLS----EINCDKI-KADVIGIDEGQFFPDIVEFCERMAN-DGKIVIVAALDG 113
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+LR FG+++ +IP A+ V+KLTA C C A F+ R +E + E+IGG D Y VCR
Sbjct: 114 TFLREPFGNILKLIPCAEYVSKLTAVCMNCFNSASFSKRIGDEQEIEVIGGKDKYQSVCR 173
Query: 253 QHY 255
+ Y
Sbjct: 174 KCY 176
>gi|345107262|ref|YP_004821427.1| thymidine kinase [Yoka poxvirus]
gi|344267336|gb|AEN03663.1| thymidine kinase [Yoka poxvirus]
Length = 177
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMF+GK+T L+R ++ N VI + D RYG+ ++ THD
Sbjct: 4 GNIQLILGPMFSGKSTELIRIVKRYQIAKYNCIVINHSSDIRYGISNVFTHDNNSYSAIQ 63
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ LS D + VIGIDE QFF+D+ +FC A+ GK VIVA LDG + R+
Sbjct: 64 TSKLSDL-----IDIVENFTVIGIDEGQFFQDIVEFCENMANK-GKIVIVAALDGTFKRK 117
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG+V+++IPL+++VTKLTA C C K A F+ R ET+ E+IGG D Y+ VCR+ Y
Sbjct: 118 PFGNVLNLIPLSETVTKLTAVCMKCFKDASFSKRIGTETEIEIIGGKDKYLSVCRKCY 175
>gi|158186787|ref|NP_434687.1| thymidine kinase, cytosolic [Rattus norvegicus]
gi|149054919|gb|EDM06736.1| rCG32815, isoform CRA_b [Rattus norvegicus]
Length = 232
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 115/187 (61%), Gaps = 13/187 (6%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRN 71
Query: 132 ---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ ++ G V VIGIDE QFF D+ DFC E + GKTVIVA
Sbjct: 72 TMDALPACMLKDVA--QEALG------VAVIGIDEGQFFPDIVDFC-ETMANTGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 123 ALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREASYTKRLGLEKEVEVIGGADKYH 182
Query: 249 PVCRQHY 255
VCR Y
Sbjct: 183 SVCRLCY 189
>gi|308799447|ref|XP_003074504.1| G Chain G, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
pdb|1W4R| (ISS) [Ostreococcus tauri]
gi|116000675|emb|CAL50355.1| G Chain G, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
pdb|1W4R| (ISS), partial [Ostreococcus tauri]
Length = 314
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 106/187 (56%), Gaps = 11/187 (5%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-----GLDSIVTHD 129
S SG + VI GPMF+GK+T L RR++ R V V+K D RY S VTHD
Sbjct: 4 SKSGSLEVIFGPMFSGKSTELQRRLRRHNVANRRVLVVKYAGDNRYDGAVGSTTSAVTHD 63
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
+P L + + DVIGIDE QFF+D+ +C + A GKTVIVA
Sbjct: 64 LATMPALPAKDLKNI-----DNVSHNYDVIGIDEGQFFDDVAHYCEKWA-QAGKTVIVAA 117
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LD + R+ F SV+ ++PLA+SVTKLTA C C A FT R T+ET E+IGG+ Y
Sbjct: 118 LDATFQRKPFNSVLQLVPLAESVTKLTAVCTDCAADAAFTARTTKETAVEVIGGASSYKA 177
Query: 250 VCRQHYV 256
VCR+ Y
Sbjct: 178 VCRRCYA 184
>gi|221126198|ref|XP_002157900.1| PREDICTED: thymidine kinase, cytosolic-like [Hydra magnipapillata]
Length = 237
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 109/185 (58%), Gaps = 8/185 (4%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVT 127
HS V++ G+I +I GPMF+GKTT LLRRI + +IK KD RY + + T
Sbjct: 12 HSYPHVNN--GQIQLIFGPMFSGKTTELLRRITRYSFARYKCLLIKYEKDIRYSNNGVST 69
Query: 128 HDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
HD A T L + + DVIG+DE QF+ D+ FC E A KTVIV
Sbjct: 70 HDQRVHEAVACTVLRDVKH-----LTKEFDVIGVDEGQFYPDVVQFCEEMAGMK-KTVIV 123
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDGD+ R+ FG+VID++PLA+SV KL+A C C A FT R +TK E+IGG+D Y
Sbjct: 124 AALDGDFQRKPFGNVIDLVPLAESVIKLSAVCMCCYGEASFTKRLGSDTKVEIIGGADKY 183
Query: 248 MPVCR 252
M CR
Sbjct: 184 MAACR 188
>gi|148679866|gb|EDL11813.1| mCG10091 [Mus musculus]
Length = 234
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 114/188 (60%), Gaps = 16/188 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVIFGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ V VIGIDE QFF D+ DFC E ++GKTVIV
Sbjct: 71 NTIDALPACMLRDVT--------QESLSVAVIGIDEGQFFPDIVDFC-EMMANEGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|313215181|emb|CBY42860.1| unnamed protein product [Oikopleura dioica]
gi|313238594|emb|CBY13640.1| unnamed protein product [Oikopleura dioica]
Length = 214
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 6/183 (3%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
A + + G+I +I GPMF+GK++ L+RRI + +K KDTRY ++ THD
Sbjct: 7 APLRTKKGQIQLIFGPMFSGKSSELMRRIVRYQYANKRCLAVKYAKDTRYHDSAMATHDQ 66
Query: 131 VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
+ ++ L + R D D+VDVIGIDE QF+ D F + A GK VI+A L
Sbjct: 67 RTIEALSVMNLGALR----GDKLDEVDVIGIDEGQFYPDCIQFAEDMA-RKGKIVIIAAL 121
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR-KTEETKTELIGGSDIYMP 249
DGDY R+ F + D++PLA+SV KL A C CG A FT R + E + ELIGG+D Y+
Sbjct: 122 DGDYRRQGFNKITDLVPLAESVIKLNAVCMICGDDAAFTKRIEQNEHRLELIGGADTYLA 181
Query: 250 VCR 252
CR
Sbjct: 182 SCR 184
>gi|343473799|emb|CCD14410.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 272
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S SG I +++GPMFAGKTT L+ R+ + VIK +KD RY +SI THD L
Sbjct: 4 SPQSGRIELVIGPMFAGKTTELMSRVNRNYLASHSCYVIKYSKDVRYSKESISTHDQRTL 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
T+S + +A+ + DVI +DE QFF+D+ +FC AA+ GK VIVA LDGD
Sbjct: 64 ----TATVSVTKLSEVGNAWREYDVIAVDEGQFFQDILEFCSMAANA-GKKVIVAALDGD 118
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y F ++ +IP A+SVTKL+A C C A+FT R + + ELIGG+D+Y+ CR
Sbjct: 119 YRNEPFENIAKLIPAAESVTKLSAVCMSCKSCDAYFTHRTVQSEQRELIGGADMYISTCR 178
Query: 253 QHY 255
Y
Sbjct: 179 ACY 181
>gi|440799111|gb|ELR20172.1| thymidine kinase [Acanthamoeba castellanii str. Neff]
Length = 252
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI+GPMF+GK+T L+RRI+ T + VIK D+RY +++ THD +P
Sbjct: 8 AGRLEVILGPMFSGKSTELIRRIRRHTIAKQRCFVIKYAADSRYSKENMATHDRYLIPHK 67
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ + R+ A D IGIDE QFF D+ FC E GK VIVA LDG + R
Sbjct: 68 NKPSIRNLREVKQEAAL--FDCIGIDEGQFFCDIVPFC-ELMASLGKIVIVAALDGTFQR 124
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG+V+++IPLA+SV+KL+A C C A FT R ET E+IGG+D Y+ VCR Y+
Sbjct: 125 KPFGTVLELIPLAESVSKLSAVCMCCSNDASFTQRLGSETAVEVIGGADKYIAVCRHCYL 184
Query: 257 S 257
+
Sbjct: 185 T 185
>gi|224074420|ref|XP_002193289.1| PREDICTED: thymidine kinase, cytosolic [Taeniopygia guttata]
Length = 223
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 110/188 (58%), Gaps = 12/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S P G+I VI GPMF+GK+T L+RR++ ++K KDTRY + THD
Sbjct: 12 GSPSRPRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYQCLLVKYAKDTRYSSSGVSTHDK 71
Query: 131 VKLPCCALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
+T+ + D Y + VIGIDE QFF D+ +FC E + GKTVIV
Sbjct: 72 --------STMEALPAGLLQDVYQEALGAAVIGIDEGQFFPDIVEFC-ETMANTGKTVIV 122
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KL A C C + A +T R E + E+IGG+D Y
Sbjct: 123 AALDGTFQRKAFGSILNLVPLAESVVKLNAVCMECFREASYTKRLGAEREVEVIGGADKY 182
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 183 HSVCRACY 190
>gi|213512420|ref|NP_001134920.1| Thymidine kinase, cytosolic [Salmo salar]
gi|209737200|gb|ACI69469.1| Thymidine kinase, cytosolic [Salmo salar]
Length = 243
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ N V+K KDTRY + THD +
Sbjct: 29 GQIQVIFGPMFSGKSTELIRRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTMEAVP 88
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
LS R S A Q VIGIDE QFF D +FC E A+ GKT+IVA LDG + R+
Sbjct: 89 ANCLSDVR----SLAL-QACVIGIDEGQFFPDTVEFCEEMANM-GKTIIVAALDGTFQRK 142
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG++++++PLA+SV KL A C C K A +T R E + E+IGG+D+Y CR+ Y
Sbjct: 143 PFGNILNLVPLAESVVKLNAVCMQCYKEAAYTKRLGAEKEVEVIGGADMYHARCRKCY 200
>gi|209731272|gb|ACI66505.1| Thymidine kinase, cytosolic [Salmo salar]
Length = 243
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ N V+K KDTRY + THD +
Sbjct: 29 GQIQVIFGPMFSGKSTELIRRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTMEAVP 88
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
LS R S A Q VIGIDE QFF D +FC E A+ GKT+IVA LDG + R+
Sbjct: 89 ANCLSDVR----SLAL-QACVIGIDEGQFFPDTVEFCEEMANM-GKTIIVAALDGTFQRK 142
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG++++++PLA+SV KL A C C K A +T R E + E+IGG+D+Y CR+ Y
Sbjct: 143 PFGNILNLVPLAESVVKLNAVCMQCYKEAAYTKRLGAEKEVEVIGGADMYHARCRKCY 200
>gi|291226621|ref|XP_002733254.1| PREDICTED: thymidine kinase-like [Saccoglossus kowalevskii]
Length = 248
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 108/188 (57%), Gaps = 6/188 (3%)
Query: 69 SEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTH 128
S+ SS G+I VI GPMF+GKTT L+RRI+ + ++K D RY + I TH
Sbjct: 8 SDVICSSKKGQIQVIFGPMFSGKTTELIRRIKRFQIANHSCLIVKYANDDRYDKNGIATH 67
Query: 129 DGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
D + T L R+ + DVIGIDE QFF D +F E A GK VIVA
Sbjct: 68 DREVKAAVSATELCPLRK-----TAMKYDVIGIDEGQFFPDCVEFSEEMASK-GKKVIVA 121
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
LDG + R+ FG++++++PLA+SV KL A C C A +T R ET E+IGG+D YM
Sbjct: 122 ALDGTFQRKGFGNILNLVPLAESVIKLNAVCMHCYSEASYTKRLGVETAVEIIGGTDKYM 181
Query: 249 PVCRQHYV 256
VCR YV
Sbjct: 182 AVCRACYV 189
>gi|296203311|ref|XP_002748857.1| PREDICTED: thymidine kinase, cytosolic [Callithrix jacchus]
Length = 234
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 118/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|403280450|ref|XP_003931731.1| PREDICTED: thymidine kinase, cytosolic [Saimiri boliviensis
boliviensis]
Length = 234
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 118/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVT--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|145340984|ref|XP_001415596.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575819|gb|ABO93888.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 179
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI------VTHDGV 131
G + VI GPMF+GK+T L RR++ T R V V+K D RY D++ VTHD
Sbjct: 1 GSLEVIFGPMFSGKSTELQRRLRRHTMASRRVLVVKYAGDNRYD-DAVGTTTAAVTHDLA 59
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
+P L + + DVIGIDE QFF+D+ FC + A H GKTVIVA LD
Sbjct: 60 TMPALPTKDLRNI-----DNVAHNYDVIGIDEGQFFDDVAAFCEKWA-HAGKTVIVAALD 113
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
+ R+ F SV+ ++PLA++VTKLTA C C A FT R T+ET ELIGG+ Y VC
Sbjct: 114 ATFQRKPFNSVLQLVPLAENVTKLTAVCTDCAADAAFTARTTKETSVELIGGASQYKAVC 173
Query: 252 RQHY 255
R Y
Sbjct: 174 RACY 177
>gi|61403504|gb|AAH91758.1| Thymidine kinase 1 [Mus musculus]
Length = 233
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 117/188 (62%), Gaps = 16/188 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+G MF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVILGLMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC E ++GKTVIV
Sbjct: 71 NTMDALPACMLRDVT--QESLG------VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|291415764|ref|XP_002724120.1| PREDICTED: thymidine kinase 1 [Oryctolagus cuniculus]
Length = 256
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 127/220 (57%), Gaps = 15/220 (6%)
Query: 41 TSLRNPKFIHSMVSPRPPLFSLQNRNLHS--EASVSSPSGEIHVIVGPMFAGKTTTLLRR 98
TS + + +++ P P ++ NL + +S S G+I VI+GPMF+GK+T L+RR
Sbjct: 2 TSATPARGVRALLCPVLPGRAMSCINLPTVLPSSPSKTRGQIQVILGPMFSGKSTELMRR 61
Query: 99 IQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KLPCCALTTLSSFRQKFGSDAYDQ 155
++ VIK KD RY S THD LP C L + +A
Sbjct: 62 VRRFQIAQYKCLVIKYAKDVRYS-HSFCTHDRNTMDALPACLL-------RDVAQEAL-A 112
Query: 156 VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKL 215
V VIGIDE QFF D+ +FC EA + GKTVIVA LDG + R++FGS+++++PLA+SV KL
Sbjct: 113 VAVIGIDEGQFFPDIVEFC-EAMANSGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKL 171
Query: 216 TARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
TA C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 172 TAVCMECFREAAYTKRLGSEKEVEVIGGADKYHSVCRLCY 211
>gi|440300590|gb|ELP93037.1| thymidine kinase, cytosolic, putative [Entamoeba invadens IP1]
Length = 245
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG-LDSIVTHDGVKLPCC 136
G I +I+GPMF+GKTT L+R I+ T + ++K KD RYG ++ V+HD K
Sbjct: 24 GSIQLIMGPMFSGKTTELIRLIKRFTVSKKRTVILKYTKDVRYGEVNEAVSHDQEKWE-- 81
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ T+ + YD VIGIDE QFF DL +F AD+ GK VI+A LDG + R
Sbjct: 82 AIPTMELMPCVKEALHYD---VIGIDEGQFFPDLLEFSELMADY-GKRVIIAALDGTFQR 137
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + DI+PL +SV KL A C FCG +A F++R TEE E+IGG++ Y VCR+ Y
Sbjct: 138 KVFGQITDIVPLCESVRKLRAVCVFCGNKASFSMRTTEEESVEVIGGAEKYCAVCRKCY 196
>gi|238231569|ref|NP_001153968.1| thymidine kinase [Oncorhynchus mykiss]
gi|223049427|gb|ACM80353.1| thymidine kinase [Oncorhynchus mykiss]
Length = 233
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 105/178 (58%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ N V+K KDTRY + THD +
Sbjct: 19 GQIQVIFGPMFSGKSTELIRRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTMEAVP 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
LS R Q VIGIDE QFF D+ FC E A+ GKT+IVA LDG + R+
Sbjct: 79 ANCLSDVR-----SLALQACVIGIDEGQFFPDIVQFCEEMANM-GKTIIVAALDGTFQRK 132
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG +++++PLA+SV KL A C C K A +T R E + E+IGG+D+Y CR+ Y
Sbjct: 133 PFGDILNLVPLAESVVKLNAVCMQCYKEAAYTKRLGAEKEVEVIGGADMYHARCRKCY 190
>gi|339709|gb|AAA61187.1| thymidine kinase (EC 2.7.1.21) [Homo sapiens]
gi|339719|gb|AAA61191.1| thymidine kinase [Homo sapiens]
Length = 234
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIMEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|30584167|gb|AAP36332.1| Homo sapiens thymidine kinase 1, soluble [synthetic construct]
gi|33303757|gb|AAQ02392.1| thymidine kinase 1, soluble, partial [synthetic construct]
gi|60653309|gb|AAX29349.1| thymidine kinase 1 soluble [synthetic construct]
Length = 235
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|71746582|ref|XP_822346.1| thymidine kinase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70832014|gb|EAN77518.1| thymidine kinase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 455
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR+Q R+ +IK DTRY +I +HD L A
Sbjct: 205 GRIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIIKYTGDTRYSEGAITSHDQRALT--A 262
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++S+ D + + DVI +DE QFF + FC +AAD GK VIV+ LD DYL+
Sbjct: 263 NVSVSNLHDV--GDEWRKYDVIAVDEGQFFPGVAAFCSKAAD-SGKVVIVSALDADYLQE 319
Query: 198 SFGSVIDIIPLADSVTKLTARCEFC-GKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + ++ ADSV KL+A C C ++A FT R + + +L+GGSD+YM VCR Y
Sbjct: 320 PFEEICLLVSRADSVVKLSAVCMECHNRKASFTYRTVKSDERKLVGGSDMYMSVCRSCYE 379
Query: 257 SGQVVVEAARIVLESQKVQCGSY 279
+ + +V+ + + + GSY
Sbjct: 380 TKRNMVQTEKYIYSCVGINEGSY 402
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC-C 136
G I +I+GPMFAGKTT L+RR+Q R+ +I ++++ Y + THD + L
Sbjct: 6 GNIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANV 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ LS D + DVI +D QFF D+ FC AA+ +GKTVIV+ LD D
Sbjct: 65 SIAKLSEV-----CDEWRDYDVIAVDNGQFFPDVVGFCARAAN-EGKTVIVSALDVDCRE 118
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F V ++P A+SV KL+A C C + AF T R E + EL GG+D+Y+ VCR Y
Sbjct: 119 TPFDEVCRLVPRAESVLKLSAVCMECHEHDAFLTYRTIESNERELYGGADMYLAVCRWCY 178
>gi|145580142|pdb|2ORV|A Chain A, Human Thymidine Kinase 1 In Complex With Tp4a
gi|145580143|pdb|2ORV|B Chain B, Human Thymidine Kinase 1 In Complex With Tp4a
Length = 234
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|164698438|ref|NP_003249.3| thymidine kinase, cytosolic [Homo sapiens]
gi|332849154|ref|XP_003315798.1| PREDICTED: thymidine kinase, cytosolic isoform 2 [Pan troglodytes]
gi|23503074|sp|P04183.2|KITH_HUMAN RecName: Full=Thymidine kinase, cytosolic
gi|14043853|gb|AAH07872.1| Thymidine kinase 1, soluble [Homo sapiens]
gi|14124928|gb|AAH07986.1| TK1 protein [Homo sapiens]
gi|30582721|gb|AAP35587.1| thymidine kinase 1, soluble [Homo sapiens]
gi|52632392|gb|AAH06484.1| Thymidine kinase 1, soluble [Homo sapiens]
gi|60656369|gb|AAX32748.1| thymidine kinase 1 [synthetic construct]
gi|60656371|gb|AAX32749.1| thymidine kinase 1 [synthetic construct]
gi|189067473|dbj|BAG37455.1| unnamed protein product [Homo sapiens]
gi|307686491|dbj|BAJ21176.1| thymidine kinase 1, soluble [synthetic construct]
gi|410217390|gb|JAA05914.1| thymidine kinase 1, soluble [Pan troglodytes]
gi|410254542|gb|JAA15238.1| thymidine kinase 1, soluble [Pan troglodytes]
Length = 234
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|212373999|emb|CAP19646.1| thymidine kinase [Suberites domuncula]
Length = 220
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 106/175 (60%), Gaps = 6/175 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + +I+GPMF+GKTT L+RR++ ++K KD RY + THD +
Sbjct: 17 GHVQLILGPMFSGKTTELIRRMRRFQVANYACLIVKYAKDDRYSNQDVSTHDKQMTAGIS 76
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L+ ++K + VIGIDE QFF D+ DFC E A+ GKTVIVA LDG + R+
Sbjct: 77 ATELTEVKKK-----AKKYGVIGIDEGQFFPDIVDFCEEMANA-GKTVIVAALDGTFQRK 130
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FG +++++P+A+SV KL A C C K A FT R E + E+IGGSD YM VCR
Sbjct: 131 PFGPILNLVPMAESVVKLKAVCMVCYKDAAFTKRLGAEKQIEVIGGSDKYMAVCR 185
>gi|26351495|dbj|BAC39384.1| unnamed protein product [Mus musculus]
Length = 233
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 117/188 (62%), Gaps = 16/188 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC E ++GKTVIV
Sbjct: 71 NTMDALPACMLRDVT--QESLG------VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
V R Y
Sbjct: 182 HSVGRLCY 189
>gi|410917293|ref|XP_003972121.1| PREDICTED: thymidine kinase, cytosolic-like [Takifugu rubripes]
Length = 231
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 6/184 (3%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S + G+I VI GPMF+GK+T L+RR++ VIK KDTRY + THD
Sbjct: 13 SPKNARGQIQVIFGPMFSGKSTELMRRVRRFQLAQYKCLVIKYAKDTRYSDSGMATHDKN 72
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
+ L S A QV VIG+DE QFF D+ +FC E A+ GKT+IVA LD
Sbjct: 73 TMEAVPANRLGDVH----SQAL-QVCVIGVDEGQFFPDIVEFCEEMANL-GKTIIVAALD 126
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
G + R+ FGS+++++PLA+SV KL A C C K A +T R E + E+IGG+D Y VC
Sbjct: 127 GTFQRKPFGSILNLVPLAESVVKLNAVCMQCFKEAAYTKRIGAEKEVEVIGGADKYQAVC 186
Query: 252 RQHY 255
R+ Y
Sbjct: 187 RKCY 190
>gi|119609911|gb|EAW89505.1| thymidine kinase 1, soluble, isoform CRA_a [Homo sapiens]
gi|119609914|gb|EAW89508.1| thymidine kinase 1, soluble, isoform CRA_a [Homo sapiens]
Length = 276
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 54 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 112
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 113 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 163
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 164 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 223
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 224 HSVCRLCYFKKASGQ 238
>gi|197692491|dbj|BAG70209.1| thymidine kinase 1 soluble isoform [Homo sapiens]
Length = 234
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFQEAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|332849156|ref|XP_003315799.1| PREDICTED: thymidine kinase, cytosolic isoform 3 [Pan troglodytes]
gi|410052228|ref|XP_003953250.1| PREDICTED: thymidine kinase, cytosolic [Pan troglodytes]
gi|410339535|gb|JAA38714.1| thymidine kinase 1, soluble [Pan troglodytes]
Length = 276
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 54 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 112
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 113 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 163
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 164 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 223
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 224 HSVCRLCYFKKASGQ 238
>gi|397494933|ref|XP_003818321.1| PREDICTED: thymidine kinase, cytosolic [Pan paniscus]
Length = 276
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 54 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 112
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 113 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 163
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 164 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 223
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 224 HSVCRLCYFKKASGQ 238
>gi|22324517|gb|AAM95606.1|AF395663_1 thymidine kinase [Trypanosoma brucei]
Length = 455
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMFAGKTT L+RR+Q R+ +IK DTRY +I +HD L A
Sbjct: 205 GRIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIIKYAGDTRYSEGAITSHDQRALT--A 262
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++S+ D + + DVI +DE QFF + FC +AAD GK VIV+ LD DYL+
Sbjct: 263 NVSVSNLHDV--GDEWRKYDVIAVDEGQFFPGVAAFCSKAAD-SGKVVIVSALDADYLQE 319
Query: 198 SFGSVIDIIPLADSVTKLTARCEFC-GKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + ++ ADSV KL+A C C ++A FT R + + +L+GGSD+YM VCR Y
Sbjct: 320 PFEEICLLVSRADSVVKLSAVCMECHNRKASFTYRTVKSDERKLVGGSDMYMSVCRSCYE 379
Query: 257 SGQVVVEAARIVLESQKVQCGSY 279
+ + +V+ + + + GSY
Sbjct: 380 TKRNMVQTEKYIYSCVGINEGSY 402
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC-C 136
G I +I+GPMFAGKTT L+RR+Q R+ +I ++++ Y + THD + L
Sbjct: 6 GNIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANV 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ LS D + DVI +D QFF D+ FC AA+ +GKTVIV+ LD D
Sbjct: 65 SIAKLSEV-----CDEWRDYDVIAVDNGQFFPDVVGFCARAAN-EGKTVIVSALDVDCRE 118
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F V ++P A+SV KL+A C C + AF T R E + EL GG+D+Y+ VCR Y
Sbjct: 119 TPFDEVCRLVPRAESVLKLSAVCMKCHEHDAFLTYRTIESNERELYGGADMYLAVCRWCY 178
>gi|402901237|ref|XP_003913561.1| PREDICTED: thymidine kinase, cytosolic [Papio anubis]
gi|383421181|gb|AFH33804.1| thymidine kinase, cytosolic [Macaca mulatta]
Length = 234
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 116/195 (59%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDAA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|348558240|ref|XP_003464926.1| PREDICTED: thymidine kinase, cytosolic-like [Cavia porcellus]
Length = 233
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 115/189 (60%), Gaps = 14/189 (7%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFSTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + ++ G V VIGIDE QFF D+ DFC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDTT--QEALG------VAVIGIDEGQFFPDIVDFC-EAMANSGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDI 246
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R +E + E+IGG+D
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFRGEAAYTKRLGQEKEVEVIGGADK 181
Query: 247 YMPVCRQHY 255
Y VCR Y
Sbjct: 182 YHSVCRLCY 190
>gi|58177292|pdb|1XBT|A Chain A, Crystal Structure Of Human Thymidine Kinase 1
gi|58177293|pdb|1XBT|B Chain B, Crystal Structure Of Human Thymidine Kinase 1
gi|58177294|pdb|1XBT|C Chain C, Crystal Structure Of Human Thymidine Kinase 1
gi|58177295|pdb|1XBT|D Chain D, Crystal Structure Of Human Thymidine Kinase 1
gi|58177296|pdb|1XBT|E Chain E, Crystal Structure Of Human Thymidine Kinase 1
gi|58177297|pdb|1XBT|F Chain F, Crystal Structure Of Human Thymidine Kinase 1
gi|58177298|pdb|1XBT|G Chain G, Crystal Structure Of Human Thymidine Kinase 1
gi|58177299|pdb|1XBT|H Chain H, Crystal Structure Of Human Thymidine Kinase 1
Length = 193
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 114/188 (60%), Gaps = 13/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|320166035|gb|EFW42934.1| thymidine kinase [Capsaspora owczarzaki ATCC 30864]
Length = 215
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 111/190 (58%), Gaps = 6/190 (3%)
Query: 66 NLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI 125
N++S G+I VI GPMF+GKTT L+RR++ ++ V+K KD RY I
Sbjct: 5 NINSVVHNLCQRGQIQVIFGPMFSGKTTELIRRLRRFQVAQQSCMVVKYAKDNRYSEAGI 64
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
THD L A T L Q ++A +VIGIDE QFF D+ +F + A GKTV
Sbjct: 65 STHDRSILKATAATVL----QDIATEAR-HFNVIGIDEGQFFPDVVEFSEQMAKA-GKTV 118
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVA LDG + R+ FG V++++PLA+SV KLTA C C A FT R ET E+IGG +
Sbjct: 119 IVAALDGTFQRKPFGRVLELVPLAESVVKLTAVCMNCANDAPFTKRLGAETAIEVIGGQE 178
Query: 246 IYMPVCRQHY 255
YM CR+ +
Sbjct: 179 SYMAACRECF 188
>gi|327264601|ref|XP_003217101.1| PREDICTED: thymidine kinase, cytosolic [Anolis carolinensis]
Length = 233
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ +IK KDTRY ++ + THD + +
Sbjct: 19 GQIQVIFGPMFSGKSTELMRRVRRFQIAQYKCLLIKYAKDTRYCVNGVSTHDRNTMEAVS 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L Q+ S A VIGIDE QFF D+ +FC EA + GKTVIVA LDG + R+
Sbjct: 79 ACCLKDVHQEALSSA-----VIGIDEGQFFPDIIEFC-EAMANAGKTVIVAALDGTFQRK 132
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+FG+++ ++PLA+SV KL A C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 133 AFGNILHLVPLAESVVKLNAVCMECFREASYTKRLGAEKEVEVIGGADKYHSVCRVCY 190
>gi|342183835|emb|CCC93315.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 849
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 69 SEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTH 128
+E S SG I +++GPMFAGKTT L+ R+ + VI+ +KD RY + I T+
Sbjct: 577 AENPQSPQSGRIELVIGPMFAGKTTELISRVNRNYLARYSCYVIEYSKDMRYSKEIISTY 636
Query: 129 DGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
D LP T+S + +A+ DVI +DE QFF D+ +FC AA+ GK VIVA
Sbjct: 637 DRRTLP----ATVSVNKLSEVGNAWHDYDVIAVDEGQFFPDILEFCSMAANA-GKKVIVA 691
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
LDGDY F + +IP A+SVTKL+A C CG A +T R + + ELIGG+DIY+
Sbjct: 692 ALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSCGCDAHYTHRTVQSEQRELIGGADIYI 751
Query: 249 PVCRQHY 255
CR Y
Sbjct: 752 ATCRACY 758
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 5/179 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I +++GPMFAGKTT L+ R+ + VI+ +K+ RY ++I THDG LP
Sbjct: 200 SGRIELVIGPMFAGKTTELISRVNRNYLASHSCYVIEYSKNMRYSRENIPTHDGRTLP-- 257
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T+S + +A+ DVI +D QFF D+ +FC AA+ GK VIVA LDGDY
Sbjct: 258 --ATVSVNKLSEVGNAWHDYDVIAVDGGQFFPDILEFCSMAANA-GKKVIVAALDGDYRN 314
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F + +IP A+SVTKL+A C CG A++T R + + ELIGG++ Y CR Y
Sbjct: 315 EPFEHIAKLIPAAESVTKLSAVCMSCGCDAYYTHRTVQSEQRELIGGAEKYEATCRACY 373
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I +++GPMFAGKTT L+ R+ + VI+ +KD RY + I T+D LP
Sbjct: 392 SGRIELVIGPMFAGKTTELISRVNRNYLARYSCYVIEYSKDMRYSKEIIPTYDRRTLP-- 449
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T+S + +A+ DVI +DE QFF D+ +FC A+ GK VIVA LDGDY
Sbjct: 450 --ATVSVNKLSEVGNAWHDYDVIAVDEGQFFPDILEFCSMVANA-GKKVIVAALDGDYRN 506
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F + +IP A+SVTKL+A C C A++T R + + ELIGG+D+Y+ CR Y
Sbjct: 507 EPFEHIAKLIPAAESVTKLSAVCMSCRLSNAYYTHRIVQSEQRELIGGADMYIAACRACY 566
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 104/183 (56%), Gaps = 6/183 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S SG I +++GPMFAGKTT L+ R+ + G + VI+ +K RY + +
Sbjct: 4 SPQSGRIELVIGPMFAGKTTELMSRVNRYSLAGYSCYVIEYSKHERYSKKIFSPQHRLSM 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
+TT+S + +A+ DVI +DE QFF D+ +FC AA+ GK VIVA LDGD
Sbjct: 64 ----ITTVSVTKLSEVGNAWHDYDVIAVDEGQFFPDILEFCSMAANA-GKKVIVAALDGD 118
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y F ++ +IP A+SVTKL+A C C A++T R + + ELIGG+D Y CR
Sbjct: 119 YRNEPFENIAKLIPAAESVTKLSAVCMSCRVSNAYYTHRTVQSEQRELIGGADKYEATCR 178
Query: 253 QHY 255
Y
Sbjct: 179 ACY 181
>gi|428164318|gb|EKX33348.1| hypothetical protein GUITHDRAFT_158919 [Guillardia theta CCMP2712]
Length = 182
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 110/179 (61%), Gaps = 14/179 (7%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG--LDSIVTHDGVKL---PCC 136
+I+GPMFAGK+T L+RR++ +IK KD R+G LD + THD ++ PC
Sbjct: 1 MILGPMFAGKSTELMRRMRRHKLANLQCIIIKYEKDLRHGEGLDKLATHDNHRVAAVPCS 60
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
L L F++ +DVIGIDEAQF+ DL FC E A+ GK +I++ LDGD+ R
Sbjct: 61 RLYDL--FKEA------SSMDVIGIDEAQFYPDLVAFCEELAEM-GKIIILSALDGDFRR 111
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG+V ++P A+S+ KLTA C+ C + A FT R T + E IGG ++YMP CR+ +
Sbjct: 112 EPFGAVTSLVPKAESIIKLTAVCKLCHQEASFTRRTTADVALEAIGGEEMYMPTCRKCF 170
>gi|324503582|gb|ADY41554.1| Thymidine kinase [Ascaris suum]
Length = 375
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 108/184 (58%), Gaps = 6/184 (3%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
+ S SG I +I GPMF+GKTT +LRR+ R ++K DTRY LD + THD +
Sbjct: 11 TFSMASGHIQLIFGPMFSGKTTEMLRRLNRYKLANRTCRIVKYRNDTRYALDHVATHD-L 69
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
++ +S+ + D + V+ IDE QFF+D+ + C E + GK VIV+ LD
Sbjct: 70 QMQ----EAISAVKVADVMDELSEAHVVAIDEGQFFDDIAE-CSENLANQGKIVIVSALD 124
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
GD+ R+ F +V+D+ P ++ + KL A C CG+ A FT R T T ELIGG D+Y +C
Sbjct: 125 GDFNRKRFKNVLDMCPFSEDIIKLNAVCTGCGEDASFTKRLTSNTALELIGGRDVYTAMC 184
Query: 252 RQHY 255
RQ Y
Sbjct: 185 RQCY 188
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 75 SPS-GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
SPS G I VI+GPMF+GKTT +LRR GR VIK DTRY + +VTHD +
Sbjct: 200 SPSRGRIEVILGPMFSGKTTEMLRRYNRHALAGRECRVIKYRGDTRYDANKVVTHDQLMH 259
Query: 134 PCCALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
T + +D +D++ VI IDE QFF+D+ + C A+ GK VIVA L
Sbjct: 260 DGVIATHI--------ADIFDELLAYKVIAIDEGQFFQDIAECCERLANM-GKIVIVAAL 310
Query: 191 DGDYLRR 197
DGDY RR
Sbjct: 311 DGDYSRR 317
>gi|61680155|pdb|1W4R|A Chain A, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680156|pdb|1W4R|B Chain B, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680157|pdb|1W4R|C Chain C, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680158|pdb|1W4R|D Chain D, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680159|pdb|1W4R|E Chain E, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680160|pdb|1W4R|F Chain F, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680161|pdb|1W4R|G Chain G, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680162|pdb|1W4R|H Chain H, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
Length = 195
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 113/185 (61%), Gaps = 13/185 (7%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG--- 130
S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 16 SKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDRNTM 74
Query: 131 VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIVA L
Sbjct: 75 EALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVAAL 125
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
DG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y V
Sbjct: 126 DGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYHSV 185
Query: 251 CRQHY 255
CR Y
Sbjct: 186 CRLCY 190
>gi|197692237|dbj|BAG70082.1| thymidine kinase 1 soluble isoform [Homo sapiens]
Length = 234
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 116/195 (59%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ + G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QGALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|395826830|ref|XP_003786617.1| PREDICTED: thymidine kinase, cytosolic [Otolemur garnettii]
Length = 236
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 118/195 (60%), Gaps = 19/195 (9%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI GPMF+GK+T L+RR+Q VIK +KDTRY + THD
Sbjct: 12 SSPSKMRGQIQVIFGPMFSGKSTELMRRVQRFQIAQYKCLVIKYSKDTRYS-SNFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G+ VIGIDE QFF D+ +FC A+ GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALGAA------VIGIDEGQFFPDIVEFCETMANA-GKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG +++++P+A+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGPILNLVPVAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKRASGQ 196
>gi|347300224|ref|NP_001231423.1| thymidine kinase, cytosolic [Cricetulus griseus]
gi|125428|sp|P09768.1|KITH_CRIGR RecName: Full=Thymidine kinase, cytosolic
gi|457429|gb|AAA37022.1| thymidine kinase [Cricetulus griseus]
gi|344241789|gb|EGV97892.1| Thymidine kinase, cytosolic [Cricetulus griseus]
Length = 234
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 114/188 (60%), Gaps = 13/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQNKCLVIKYAKDTRYS-SSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G+ VIGIDE QFF D+ +FC E + GKTVIV
Sbjct: 71 NTMDALPACLLRDVA--QEALGAA------VIGIDEGQFFPDIVEFC-EVMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRVCY 189
>gi|444727784|gb|ELW68262.1| Thymidine kinase, cytosolic [Tupaia chinensis]
Length = 234
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFSTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC A+ GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFCETMANA-GKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHYV---SGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKPSGQ 196
>gi|262118466|pdb|2WVJ|A Chain A, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118467|pdb|2WVJ|B Chain B, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118468|pdb|2WVJ|C Chain C, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118469|pdb|2WVJ|D Chain D, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118470|pdb|2WVJ|E Chain E, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118471|pdb|2WVJ|F Chain F, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118472|pdb|2WVJ|G Chain G, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118473|pdb|2WVJ|H Chain H, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
Length = 193
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 114/188 (60%), Gaps = 13/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A ++ R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYSKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|297273738|ref|XP_001107944.2| PREDICTED: thymidine kinase, cytosolic isoform 3, partial [Macaca
mulatta]
Length = 304
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 116/195 (59%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 82 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SSFCTHDR 140
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 141 NTMEALPACLLRDAA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 191
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 192 AALDGTFQRKPFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 251
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 252 HSVCRLCYFKKASGQ 266
>gi|152941146|gb|ABS45010.1| thymidine kinase 1, soluble [Bos taurus]
gi|440892460|gb|ELR45640.1| Thymidine kinase, cytosolic [Bos grunniens mutus]
Length = 266
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 115/198 (58%), Gaps = 16/198 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY THD
Sbjct: 40 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SLFSTHDR 98
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + Q+ V VIGIDE QFF D+ +FC A+ GKTVIV
Sbjct: 99 NTMEALPACLLRDVIQDAQR--------VAVIGIDEGQFFPDIVEFCENMAN-SGKTVIV 149
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 150 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGVEKEVEVIGGADKY 209
Query: 248 MPVCRQHY---VSGQVVV 262
VCR Y SGQ V
Sbjct: 210 HSVCRLCYFKKASGQPAV 227
>gi|225602|prf||1307188A thymidine kinase
Length = 234
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +F +EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIMEF-KEAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>gi|431908720|gb|ELK12312.1| Thymidine kinase, cytosolic [Pteropus alecto]
Length = 243
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 118/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ +IK KDTRY DS THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRLRRFQIAQYRCLMIKYAKDTRYS-DSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +F EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VTVIGIDEGQFFPDIVEF-SEAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGMEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HAVCRLCYFRKASGQ 196
>gi|148229735|ref|NP_001091041.1| thymidine kinase, cytosolic [Bos taurus]
gi|182705238|sp|A5D7R8.1|KITH_BOVIN RecName: Full=Thymidine kinase, cytosolic
gi|146186560|gb|AAI40659.1| MGC148510 protein [Bos taurus]
gi|296476077|tpg|DAA18192.1| TPA: thymidine kinase 1 [Bos taurus]
Length = 238
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 115/198 (58%), Gaps = 16/198 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SLFSTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + Q+ V VIGIDE QFF D+ +FC A+ GKTVIV
Sbjct: 71 NTMEALPACLLRDVIQDAQR--------VAVIGIDEGQFFPDIVEFCENMAN-SGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGVEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQVVV 262
VCR Y SGQ V
Sbjct: 182 HSVCRLCYFKKASGQPAV 199
>gi|58332754|ref|NP_001011452.1| thymidine kinase 1 [Xenopus (Silurana) tropicalis]
gi|56971912|gb|AAH88552.1| thymidine kinase 1, soluble [Xenopus (Silurana) tropicalis]
gi|89273919|emb|CAJ81483.1| thymidine kinase 1, soluble [Xenopus (Silurana) tropicalis]
Length = 236
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 112/189 (59%), Gaps = 6/189 (3%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI GPMF+GK+T L+RR++ +IK KDTRY + + THD
Sbjct: 12 GSPSKSRGQIQVIFGPMFSGKSTELMRRVRRFQIAQYKCMLIKYAKDTRYSKEHLATHDQ 71
Query: 131 VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
+ +S+ + + S VIGIDE QFF D+ DFC E A+ GKT+IVA L
Sbjct: 72 N-----TMAAVSACQLRDVSAEALACSVIGIDEGQFFPDIVDFCEEMANR-GKTMIVAAL 125
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
DG + R++FG++++++PLA+SV KL + C C + A +T R E + E+IGG++ Y V
Sbjct: 126 DGTFQRKAFGNILNLVPLAESVVKLNSVCMECYREAAYTKRLGAEKEVEVIGGAEKYHSV 185
Query: 251 CRQHYVSGQ 259
CR + Q
Sbjct: 186 CRLCFFKNQ 194
>gi|324504589|gb|ADY41981.1| Thymidine kinase [Ascaris suum]
Length = 405
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 6/180 (3%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
SG I +I GPMF+GKTT +LRR+ R ++K DTRY LD + THD +++
Sbjct: 2 ASGHIQLIFGPMFSGKTTEMLRRLNRYKLANRTCRIVKYRNDTRYALDHVATHD-LQMQ- 59
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + D + V+ IDE QFF+D+ + C E + GK VIV+ LDGD+
Sbjct: 60 ---EAISAVKVADVMDELSEAHVVAIDEGQFFDDIAE-CSENLANQGKIVIVSALDGDFN 115
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R+ F +V+D+ P ++ + KL A C CG+ A FT R T T ELIGG D+Y +CRQ Y
Sbjct: 116 RKRFKNVLDMCPFSEDIIKLNAVCTGCGEDASFTKRLTSNTALELIGGRDVYTAMCRQCY 175
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 106/186 (56%), Gaps = 14/186 (7%)
Query: 75 SPS-GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
SPS G I VI+GPMF+GKTT +LRR GR VIK DTRY + +VTHD +
Sbjct: 187 SPSRGRIEVILGPMFSGKTTEMLRRYNRHALAGRECRVIKYRGDTRYDANKVVTHDQLMH 246
Query: 134 PCCALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
T + +D +D++ VI IDE QFF+D+ + C A+ GK VIVA L
Sbjct: 247 DGVIATHI--------ADIFDELLAYKVIAIDEGQFFQDIAECCERLANM-GKIVIVAAL 297
Query: 191 DGDYLRRSFGS-VIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
DGDY R+ F S V+D+ PLA+ V KL A C CG A F+ R T E+IGG + Y
Sbjct: 298 DGDYSRKEFASKVLDLCPLAEKVCKLRAVCTECGSDASFSRRTTAHKNQEIIGGIETYRA 357
Query: 250 VCRQHY 255
+CR Y
Sbjct: 358 MCRACY 363
>gi|317601883|ref|NP_001187508.1| thymidine kinase cytosolic [Ictalurus punctatus]
gi|308323197|gb|ADO28735.1| thymidine kinase cytosolic [Ictalurus punctatus]
Length = 231
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 113/193 (58%), Gaps = 16/193 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
+SPS G+I VI GPMF+GK+T L+RR++ N VIK +DTRY + THD
Sbjct: 12 NSPSKIRGQIQVIFGPMFSGKSTELMRRVRRFQVAQYNCLVIKYARDTRYSDTGMATHDK 71
Query: 131 VKLPCCALTTLSSFRQKFGSDAYD---QVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
T+ + D Y Q VIGIDE QFF D +FC EA + GKT+IV
Sbjct: 72 --------NTMEAVPANCLRDVYSRALQACVIGIDEGQFFPDTVEFC-EAMANMGKTIIV 122
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KL A C C K A +T R E + E+IGG+D Y
Sbjct: 123 AALDGTFQRKPFGNILNLVPLAESVVKLNAVCMQCFKEASYTKRLGAEQEVEVIGGADKY 182
Query: 248 MPVCRQHYVSGQV 260
VCR Y GQ+
Sbjct: 183 QAVCRVCY-GGQM 194
>gi|348532604|ref|XP_003453796.1| PREDICTED: thymidine kinase, cytosolic-like [Oreochromis niloticus]
Length = 231
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ N VIK KDTRY + THD +
Sbjct: 19 GQIQVIFGPMFSGKSTELMRRVRRFQIAQYNCLVIKYAKDTRYSDAGMATHDKSTMEAVP 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+L R + VIGIDE QFF D +FC E A+ GKT+IVA LDG + R+
Sbjct: 79 ANSLRDVRP-----LALRACVIGIDEGQFFPDAVEFCEEMANL-GKTIIVAALDGTFQRK 132
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG++++++PLA+SV KL A C C K A +T R E + E+IGG+D Y VCR+ Y
Sbjct: 133 PFGNILNLVPLAESVVKLHAVCMQCFKEAAYTKRIGAEKEVEVIGGADKYQAVCRKCY 190
>gi|442750309|gb|JAA67314.1| Putative thymidine kinase [Ixodes ricinus]
Length = 204
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 6/182 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S P G+I +I+GPMF+ KTT L+RR++ +IK DTRY + I THD +
Sbjct: 18 SCPKGQIQLIIGPMFSRKTTELMRRLKRYQVANHKCLIIKYVGDTRYEEEHISTHDSQAM 77
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P TLS + G+ D VIGIDE QFF D+ +F + A+ GK V+VA LDG
Sbjct: 78 PAIKARTLS----ELGNLQAD-FRVIGIDEGQFFADIVEFSEKMAEL-GKIVVVAALDGT 131
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y R+ F ++++++PL++SV KLTA C C A +T R E + E+IGG+D YM VCR
Sbjct: 132 YQRKGFPTIMELVPLSESVIKLTAVCMVCYAEASYTKRLGMEKEVEIIGGADKYMAVCRS 191
Query: 254 HY 255
Y
Sbjct: 192 CY 193
>gi|395533305|ref|XP_003768701.1| PREDICTED: thymidine kinase, cytosolic [Sarcophilus harrisii]
Length = 234
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 118/194 (60%), Gaps = 19/194 (9%)
Query: 75 SPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG- 130
SPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRYG S THD
Sbjct: 13 SPSKLRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYG-KSFSTHDRN 71
Query: 131 --VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ DA V VIGIDE QFF D+ +F E+ + GKTVIVA
Sbjct: 72 TMEALPACLLRDVAQ-------DAL-AVTVIGIDEGQFFPDIVEF-SESMANAGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 123 ALDGTFQRKAFGNILNLVPLAESVVKLTAVCMECFREAAYTKRLGVEKEVEVIGGADKYH 182
Query: 249 PVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 183 SVCRLCYFKKFSGQ 196
>gi|314055283|ref|YP_004063621.1| thymidine kinase [Ostreococcus tauri virus 2]
gi|313575174|emb|CBI70187.1| thymidine kinase [Ostreococcus tauri virus 2]
gi|388548603|gb|AFK65805.1| thymidine kinase [Ostreococcus lucimarinus virus OlV6]
gi|388548857|gb|AFK66058.1| thymidine kinase [Ostreococcus lucimarinus virus OlV3]
Length = 203
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 6/185 (3%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I+G MF+GKT+ L+RR++ + V VI S+KDTR + I THDGV+ PC + +
Sbjct: 5 IIMGNMFSGKTSELIRRLKRYKVLNKKVVVINSSKDTRSPEEVINTHDGVQFPCLKVDHI 64
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGS 201
S K +++ D++ IDEAQFF +L +F E K+VI+AGLDGDY +R FG
Sbjct: 65 SHCIIK---ESFCNADIVAIDEAQFFTNLKEFV-EMCLFLNKSVIIAGLDGDYKQRKFGE 120
Query: 202 VIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQ 259
VID IPLA VTKL+A C C G FT R + EL+GG+D+Y VCR+H S
Sbjct: 121 VIDCIPLASDVTKLSALCMDCKNGTPGPFTKRIVQNDDLELVGGNDMYKAVCRRHLKSMD 180
Query: 260 VVVEA 264
+ E
Sbjct: 181 IKDEG 185
>gi|66805237|ref|XP_636351.1| thymidine kinase [Dictyostelium discoideum AX4]
gi|74967354|sp|Q27564.1|KITH_DICDI RecName: Full=Thymidine kinase 1; Short=TK1; AltName:
Full=Calmodulin-binding protein ThyB
gi|21239412|gb|AAM44288.1|AF510846_1 calmodulin-binding protein ThyB [Dictyostelium discoideum]
gi|1408308|gb|AAB03673.1| ThyB [Dictyostelium discoideum]
gi|37780193|gb|AAO64434.1| thymidine kinase 1 [Dictyostelium discoideum]
gi|60464697|gb|EAL62823.1| thymidine kinase [Dictyostelium discoideum AX4]
Length = 227
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG--LDS--IVTH 128
V+ +G+I VI GPMF+GKTT L+RRI+ + +IK +KDTRY +D +VTH
Sbjct: 3 VTQIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTH 62
Query: 129 DGVK---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
D PC L + Q + DVIGIDE QFF D+ F + A+ GKTV
Sbjct: 63 DKQNYQAFPCSILEDVKEQAQNY--------DVIGIDEGQFFPDVVQFSEDLANQ-GKTV 113
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
I+A LDG + R+ F SVID++ A+ +TKLTA C C A F+ R E ELIGG D
Sbjct: 114 IIAALDGTFQRKPFQSVIDLVSKAEYITKLTAVCMVCYNEAAFSKRIVESDDIELIGGID 173
Query: 246 IYMPVCRQHYVSGQ 259
Y+ VCR Y S Q
Sbjct: 174 KYISVCRGCYNSDQ 187
>gi|348681114|gb|EGZ20930.1| hypothetical protein PHYSODRAFT_354343 [Phytophthora sojae]
Length = 181
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + +I+GPMF+GK+T L+RRI V+K DTR+ + + THD V +
Sbjct: 6 EGCLQLIIGPMFSGKSTELIRRIHRYQHTKLECLVVKYLFDTRHSEELLSTHDKVFVEAM 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ TL+ R DQ DVIGIDE QF+ DL DFC++AA+ GK V+VA LD + R
Sbjct: 66 PVQTLAEVRPFL-----DQFDVIGIDEGQFYPDLVDFCQDAANR-GKVVVVAALDATFER 119
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
++F +V+++IP A+ V KL A C CG A FT R + ELIGG ++Y P CRQ +
Sbjct: 120 KAFDNVVELIPTAEQVIKLNAICSSCGHDAAFTRRLVADKTLELIGGIELYQPRCRQCF 178
>gi|226838235|gb|ACO83358.1| thymidine kinase 1 [Anolis carolinensis]
Length = 233
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ +IK KDTRY ++ + THD + +
Sbjct: 19 GQIQVIFGPMFSGKSTELMRRVRRFQIAQYKCLLIKYAKDTRYCVNGVSTHDRNTMEAVS 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L Q+ S A VIGIDE QFF D+ +FC EA + GKTVIVA L G + R+
Sbjct: 79 ACCLKDVHQEALSSA-----VIGIDEGQFFPDIIEFC-EAMANAGKTVIVAALGGTFQRK 132
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+FG+++ ++PLA+SV KL A C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 133 AFGNILHLVPLAESVVKLNAVCMECFREASYTKRLGAEKEVEVIGGADKYHSVCRVCY 190
>gi|297701905|ref|XP_002827935.1| PREDICTED: thymidine kinase, cytosolic [Pongo abelii]
Length = 237
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 119/198 (60%), Gaps = 22/198 (11%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VTVIGIDEGQFFPDIMEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYL---RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
A LDG +L + FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+
Sbjct: 122 AALDGTFLSSMSQPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGA 181
Query: 245 DIYMPVCRQHY---VSGQ 259
D Y VCR Y SGQ
Sbjct: 182 DKYHSVCRLCYFKKASGQ 199
>gi|41054161|ref|NP_956126.1| thymidine kinase, cytosolic [Danio rerio]
gi|326672070|ref|XP_003199583.1| PREDICTED: thymidine kinase, cytosolic-like [Danio rerio]
gi|28277511|gb|AAH44148.1| Thymidine kinase 1, soluble [Danio rerio]
gi|37780420|gb|AAO64437.1| thymidine kinase 1 [Danio rerio]
gi|182891336|gb|AAI64324.1| Tk1 protein [Danio rerio]
Length = 230
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ + +IK KDTRY + THD
Sbjct: 19 GQIQVIFGPMFSGKSTELMRRVRRFQVAQYSCLLIKYAKDTRYSCTGMATHDMN-----T 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ + + R + + Q VIGIDE QFF D +FC E A+ GKT+IVA LDG + R+
Sbjct: 74 MEAVPANRLRDVAPLALQACVIGIDEGQFFPDTVEFCEEMANM-GKTIIVAALDGTFQRK 132
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+FG++++++PLA+SV KL A C C K A +T R E + E+IGGSD Y VCR Y
Sbjct: 133 AFGNILNLVPLAESVVKLNAVCMQCFKEAAYTKRLGAEKEVEVIGGSDKYHAVCRCCY 190
>gi|40556051|ref|NP_955136.1| CNPV113 thymidine kinase [Canarypox virus]
gi|40233876|gb|AAR83459.1| CNPV113 thymidine kinase [Canarypox virus]
Length = 179
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 112/184 (60%), Gaps = 9/184 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY---GLDSIVTHDGVK 132
+GEI +I GPMF+GKT+ L+R I+ GRN +IK DTRY L++I THD +
Sbjct: 2 ATGEIRLITGPMFSGKTSELIRLIKRFIISGRNCIIIKHCCDTRYIDKDLETICTHDKIT 61
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ + + L K D +VIGIDE QFFED+ +F E + GKTVI+A L+G
Sbjct: 62 MEALSCSKLLPLIPKI-----DNFEVIGIDEGQFFEDIVEF-SEIMANKGKTVIIAALNG 115
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+ R FG++ ++ L++SVT LTA C C A F+ R T++ ++IGG +IY VCR
Sbjct: 116 DFKRELFGNIFKLLSLSESVTSLTAICAVCKNEASFSKRMTDDKDVKVIGGKEIYTAVCR 175
Query: 253 QHYV 256
+ ++
Sbjct: 176 KCFL 179
>gi|308322327|gb|ADO28301.1| thymidine kinase cytosolic [Ictalurus furcatus]
Length = 231
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 109/188 (57%), Gaps = 15/188 (7%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
+SPS G+I VI GPMF+GK+T L+RR++ N VIK +DTRY + THD
Sbjct: 12 NSPSKIRGQIQVIFGPMFSGKSTELMRRVRRFQVAQYNCLVIKYARDTRYSDTGMATHDK 71
Query: 131 VKLPCCALTTLSSFRQKFGSDAYD---QVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
T+ + D Y Q VIGIDE QFF D +FC EA + GKT+IV
Sbjct: 72 --------NTMEAVPANCLRDVYSRALQACVIGIDEGQFFPDTVEFC-EAMANMGKTIIV 122
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KL A C C K A +T R E + E+IGG D Y
Sbjct: 123 AALDGTFQRKPFGNILNLVPLAESVVKLNAVCMQCFKEASYTKRLGAEQEVEVIGGVDKY 182
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 183 QAVCRVCY 190
>gi|38229228|ref|NP_938321.1| 66R [Yaba monkey tumor virus]
gi|11133048|sp|Q90033.1|KITH_YMTV5 RecName: Full=Thymidine kinase
gi|38000499|gb|AAR07422.1| 66R [Yaba monkey tumor virus]
Length = 181
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 114/183 (62%), Gaps = 7/183 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
++S SG IH+I+GPMF+GK+T L+R ++ VIK +KD RYG +VTHD
Sbjct: 1 MNSRSGYIHIILGPMFSGKSTELIRLLKRYQVAMYTCLVIKYSKDERYG-RGLVTHDNDS 59
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+P + +L+ +D DVIGIDE QFF D+ +FC A+ +GK +IVA LDG
Sbjct: 60 VPAIPVNSLNEIN---CNDI--NADVIGIDEGQFFPDIVEFCDYMAN-NGKILIVAALDG 113
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+LR+ FG+++++IP A+ V KLTA C C A F+ R ++E + E+IGG + Y VCR
Sbjct: 114 TFLRQPFGNILNLIPRAEYVLKLTAVCMICFGSASFSKRISDEQEIEIIGGKEKYQSVCR 173
Query: 253 QHY 255
Y
Sbjct: 174 VCY 176
>gi|9633697|ref|NP_051775.1| m61R [Myxoma virus]
gi|21759250|sp|Q9Q8N6.1|KITH_MYXVL RecName: Full=Thymidine kinase
gi|6523916|gb|AAF14949.1|AF170726_65 m61R [Myxoma virus]
gi|170664527|gb|ACB28684.1| m61R [Myxoma virus]
gi|170664699|gb|ACB28855.1| m61R [recombinant virus 6918VP60-T2]
gi|301134587|gb|ADK63701.1| m61R [Myxoma virus]
gi|408685227|gb|AFU77662.1| m61R [Myxoma virus]
gi|408685900|gb|AFU78331.1| m61R [Myxoma virus]
gi|408686234|gb|AFU78663.1| m61R [Myxoma virus]
Length = 178
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 110/182 (60%), Gaps = 13/182 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KL 133
G+IH+I+GPMFAGK+T L+R ++ V+K KD RYG + + THD +
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVKYEKDARYG-NGVRTHDNTCISAV 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P +L + S + V+VIGIDE QFF ++ FC A+ GK +IVA LDG
Sbjct: 64 PTASLDDVESISE--------HVEVIGIDEGQFFPNIVSFCERMANA-GKVLIVAALDGT 114
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ R+ F ++ ++IPLA++VTKL A C +C K A F+ R ET+ E+IGGSD Y VCR+
Sbjct: 115 FQRKPFTNICELIPLAENVTKLNAVCMYCYKDASFSKRLGNETEIEIIGGSDKYKSVCRK 174
Query: 254 HY 255
Y
Sbjct: 175 CY 176
>gi|359320229|ref|XP_003639284.1| PREDICTED: thymidine kinase, cytosolic-like [Canis lupus
familiaris]
Length = 242
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 114/188 (60%), Gaps = 13/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +F E + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEF-SETMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGSEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|328874302|gb|EGG22668.1| thymidine kinase [Dictyostelium fasciculatum]
Length = 213
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 112/190 (58%), Gaps = 15/190 (7%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG-LDS--IVTH 128
+V G+I VI GPMF+GKTT L+RRI+ + +IK +KDTRY +D + TH
Sbjct: 4 NVVGKIGKIQVIYGPMFSGKTTELIRRIKRFNLTNQKCLLIKYSKDTRYNEIDRSLLYTH 63
Query: 129 DGVK---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
D PC L D DVIGIDE QFF+D+ F + A+ GKTV
Sbjct: 64 DKQNYQAFPCSVLEE--------AKDKALDYDVIGIDEGQFFQDIVPFSEDLANR-GKTV 114
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVA LDG + R+ FG+V++++P A+S+TKLTA C C K A FT R + ELIGG+D
Sbjct: 115 IVAALDGTFQRKPFGTVLELVPKAESITKLTAVCMQCFKDAPFTKRIVPDETVELIGGAD 174
Query: 246 IYMPVCRQHY 255
Y+ VCR+ Y
Sbjct: 175 KYISVCRECY 184
>gi|67481149|ref|XP_655924.1| thymidine kinase [Entamoeba histolytica HM-1:IMSS]
gi|44804740|gb|AAS47703.1| thymidine kinase [Entamoeba histolytica]
gi|56473092|gb|EAL50538.1| thymidine kinase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707171|gb|EMD46875.1| thymidine kinase, putative [Entamoeba histolytica KU27]
Length = 218
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 113/192 (58%), Gaps = 7/192 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG-LDSIVTHDGVKLPCC 136
G I +I+GPMF+GKTT L+R I+ + VIK +KDTRYG D ++HD K
Sbjct: 24 GSIQLIIGPMFSGKTTELIRLIKRFRYSKKTTVVIKYSKDTRYGSEDEAISHD--KESWK 81
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ T+ + Y+ VIGIDE QFF DL +F A + G+ VI+A LDG + R
Sbjct: 82 AIPTMKLMPVLETALNYE---VIGIDEGQFFPDLIEFSEACASY-GRLVIIAALDGTFQR 137
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + D+IPL +SV KL+A C CGK+A F+LR + E E+IGG D Y VCR+ +
Sbjct: 138 KPFGQITDLIPLCESVKKLSAVCVNCGKKAAFSLRTSSEESIEVIGGVDKYCAVCRKCFY 197
Query: 257 SGQVVVEAARIV 268
++ R V
Sbjct: 198 KDGATLKTQRSV 209
>gi|225713226|gb|ACO12459.1| Thymidine kinase [Lepeophtheirus salmonis]
gi|290462321|gb|ADD24208.1| Thymidine kinase [Lepeophtheirus salmonis]
Length = 195
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 111/180 (61%), Gaps = 6/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+I +I+GPMF+GK+T L+RR++ IK KDTRY ++I THD + L +
Sbjct: 22 AQIQLIIGPMFSGKSTELIRRLKRYQIAKYKCLNIKYAKDTRYDSNAISTHDRIVLDAVS 81
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+L + +++ A D DVIGIDE QFF D+ FC A+ GK V++A LDG + R+
Sbjct: 82 SLSLDTLKER----AMD-FDVIGIDEGQFFPDIVSFCETMANS-GKIVVIAALDGTFQRK 135
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
F ++++++PL++SVTKL + C C +T R T E + E+IGG++ YM VCR Y S
Sbjct: 136 GFPNIMELVPLSESVTKLNSVCMICYGEGSYTKRTTNEKEIEVIGGTETYMSVCRTCYHS 195
>gi|325557834|gb|ADZ29216.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 175
>gi|4808438|dbj|BAA77559.1| thymidine kinase [Canarypox virus]
gi|4808444|dbj|BAA77564.1| thymidine kinase [Canarypox virus]
Length = 179
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 113/184 (61%), Gaps = 9/184 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY---GLDSIVTHDGVK 132
+GEI +I+GPMF+GKTT L+R I+ GR +IK D+RY L++I THD +
Sbjct: 2 ATGEIRLIIGPMFSGKTTELVRLIRRFMISGRKCIIIKHCSDSRYTEGDLEAIYTHDKIS 61
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ + + L K D +VIGIDE QFFED+ +F E + GKTVI+A L+G
Sbjct: 62 MEALSCSKLLPLIPKI-----DNFEVIGIDEGQFFEDIVEF-SEIMANKGKTVIIAALNG 115
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+ R+ FG++ ++ L++SVT LTA C C A F+ R T++ ++IGG ++Y VCR
Sbjct: 116 DFKRQLFGNIFKLLSLSESVTSLTAICAVCKNEASFSKRMTDDKDVKVIGGKEMYTAVCR 175
Query: 253 QHYV 256
+ ++
Sbjct: 176 KCFL 179
>gi|335843|gb|AAA80461.1| thymidine kinase [Variola major virus]
Length = 177
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDVVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++D+IPL++ V KLTA C C K A F+ R ETK E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETKIEIIGGNDMYQSVCRKCYI 175
>gi|68448963|gb|AAY97085.1| thymidine kinase [Monkeypox virus]
gi|68449165|gb|AAY97286.1| thymidine kinase [Monkeypox virus]
gi|300872709|gb|ADK39111.1| thymidine kinase [Monkeypox virus]
gi|323098495|gb|ADX22733.1| thymidine kinase [Monkeypox virus]
gi|451327770|gb|AGF36642.1| thymidine kinase [Monkeypox virus]
gi|451327978|gb|AGF36849.1| thymidine kinase [Monkeypox virus]
gi|451328120|gb|AGF36990.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EVTKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 RPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|410981864|ref|XP_003997286.1| PREDICTED: thymidine kinase, cytosolic [Felis catus]
Length = 237
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 113/188 (60%), Gaps = 13/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFSTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +F E + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEF-SETMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGAEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|377830073|ref|YP_005296270.1| unnamed protein product [Cotia virus SPAn232]
gi|1060872|dbj|BAA08118.1| thymidine kinase [Cotia virus]
gi|302635715|gb|ADL60426.1| thymidine kinase [Cotia virus]
gi|377814316|gb|AFB76935.1| thymidine kinase [Cotia virus SPAn232]
Length = 178
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 6/183 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GKTT L+R ++ VIK D R + THDGV +
Sbjct: 2 DGYIKLILGPMFSGKTTELVRIVKRYKIANYKCCVIKYYNDNRCDESIVKTHDGVYIDSI 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ L+ + D VDVIGIDE QFF D+ +F A+ GK VIV+ LD Y R
Sbjct: 62 STLKLNDIIYEM-----DNVDVIGIDEGQFFNDIVEFSENMANK-GKIVIVSALDATYQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
++FG+++++IPL++ V KL A C+ C A FT R ++TK ELIGG D Y VCR+ Y
Sbjct: 116 KTFGNILNLIPLSEKVIKLNAICKICFNDAAFTKRLCDDTKIELIGGEDKYSSVCRKCYF 175
Query: 257 SGQ 259
+G+
Sbjct: 176 AGK 178
>gi|344291108|ref|XP_003417278.1| PREDICTED: thymidine kinase, cytosolic-like [Loxodonta africana]
Length = 234
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 112/188 (59%), Gaps = 13/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G++ VI+GPMF+GK+T L+RR++ VIK KDTRYG + THD
Sbjct: 12 GSPSKTRGQVQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYG-SGLSTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + +A V VIGIDE QFF D+ +F E + GKTVIV
Sbjct: 71 NTMEALPACLLRDVVQ-------EAL-AVAVIGIDEGQFFPDIVEF-SETMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGAEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>gi|51342246|gb|AAU01290.1| MPXV-WRAIR080 [Monkeypox virus]
gi|58220550|gb|AAW67838.1| MPXV-SL-080 [Monkeypox virus]
gi|59858886|gb|AAX09181.1| MPXV-COP-080 [Monkeypox virus]
gi|68448762|gb|AAY96885.1| thymidine kinase [Monkeypox virus]
gi|68449364|gb|AAY97484.1| thymidine kinase [Monkeypox virus]
gi|68449564|gb|AAY97683.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EVTKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 RPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETEIEIIGGNDMYQSVCRKCYI 175
>gi|313768180|ref|YP_004061611.1| hypothetical protein BpV1_181c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599787|gb|ADQ91808.1| hypothetical protein BpV1_181c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 172
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
+ +I+G MF+GKT+ L+RR++ G+ + VI S KDTR D + THD V+ C
Sbjct: 3 LKIIMGNMFSGKTSELIRRLKRYKVIGKRILVINSKKDTRASEDVLRTHDNVRFDCIKTN 62
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
L + VDVI +DEAQFF L F + D GKT+++AGLDGDY +R F
Sbjct: 63 NLDEV-------DFSDVDVIAMDEAQFFTGLKKFVEKVLDS-GKTILLAGLDGDYKQRKF 114
Query: 200 GSVIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
G +ID +PLAD V K++A C C G FT R + + EL+G D+Y VCR+H
Sbjct: 115 GELIDCVPLADKVFKISAMCMVCMDGTHGPFTKRIVQNDELELVGDHDMYKAVCRKH 171
>gi|408687241|gb|AFU79664.1| m61R [Myxoma virus]
Length = 181
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 109/182 (59%), Gaps = 13/182 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KL 133
G+IH+I+GPMFAGK+T L+R ++ V+ KD RYG + + THD +
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVNYEKDARYG-NGVRTHDNTCISAV 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P +L + S + V+VIGIDE QFF ++ FC A+ GK +IVA LDG
Sbjct: 64 PTASLDDVESISE--------HVEVIGIDEGQFFPNIVSFCERMANA-GKVLIVAALDGT 114
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ R+ F ++ ++IPLA++VTKL A C +C K A F+ R ET+ E+IGGSD Y VCR+
Sbjct: 115 FQRKPFTNICELIPLAENVTKLNAVCMYCYKDASFSKRLGNETEIEIIGGSDKYKSVCRK 174
Query: 254 HY 255
Y
Sbjct: 175 CY 176
>gi|22164683|ref|NP_671596.1| EVM078 [Ectromelia virus]
gi|22123824|gb|AAM92382.1|AF523264_78 EVM078 [Ectromelia virus]
gi|383866798|gb|AFH54641.1| thymidine kinase [Ectromelia virus]
Length = 177
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L DA VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVM-----DAVTDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++D+IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y +CR+ Y+
Sbjct: 116 KPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETEIEIIGGNDMYQSMCRKCYI 175
>gi|332176|gb|AAA80529.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EVTKLCDVLE-----AITDFSVIGIDEGQFFPDVVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 RPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETEIEIIGGNDMYQSVCRKCYI 175
>gi|22095787|sp|O57203.1|KITH_VACCA RecName: Full=Thymidine kinase
gi|2772764|gb|AAB96503.1| thymidine kinase [Vaccinia virus]
gi|47088414|gb|AAT10484.1| thymidine kinase [Vaccinia virus]
gi|160857976|emb|CAM58264.1| thymidine kinase [Vaccinia virus Ankara]
gi|373448471|gb|AEY73852.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 106/181 (58%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ YV
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYV 175
Query: 257 S 257
Sbjct: 176 G 176
>gi|125455|sp|P28851.1|KITH_MYXVU RecName: Full=Thymidine kinase
gi|60616|emb|CAA36880.1| thymidine kinase [Myxoma virus]
gi|408684554|gb|AFU76993.1| m61R [Myxoma virus]
gi|408684722|gb|AFU77160.1| m61R [Myxoma virus]
gi|408684888|gb|AFU77325.1| m61R [Myxoma virus]
gi|408685057|gb|AFU77493.1| m61R [Myxoma virus]
gi|408685397|gb|AFU77831.1| m61R [Myxoma virus]
gi|408685562|gb|AFU77995.1| m61R [Myxoma virus]
gi|408685731|gb|AFU78163.1| m61R [Myxoma virus]
gi|408686065|gb|AFU78495.1| m61R [Myxoma virus]
gi|408686402|gb|AFU78830.1| m61R [Myxoma virus]
gi|408686570|gb|AFU78997.1| m61R [Myxoma virus]
gi|408686737|gb|AFU79163.1| m61R [Myxoma virus]
gi|408686905|gb|AFU79330.1| m61R [Myxoma virus]
gi|408687074|gb|AFU79498.1| m61R [Myxoma virus]
gi|408687409|gb|AFU79831.1| m61R [Myxoma virus]
gi|408687576|gb|AFU79997.1| m61R [Myxoma virus]
gi|408687744|gb|AFU80164.1| m61R [Myxoma virus]
gi|408687912|gb|AFU80331.1| m61R [Myxoma virus]
gi|408688080|gb|AFU80498.1| m61R [Myxoma virus]
gi|408688249|gb|AFU80666.1| m61R [Myxoma virus]
Length = 178
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 109/182 (59%), Gaps = 13/182 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KL 133
G+IH+I+GPMFAGK+T L+R ++ V+ KD RYG + + THD +
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVNYEKDARYG-NGVRTHDNTCISAV 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P +L + S + V+VIGIDE QFF ++ FC A+ GK +IVA LDG
Sbjct: 64 PTASLDDVESISE--------HVEVIGIDEGQFFPNIVSFCERMANA-GKVLIVAALDGT 114
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ R+ F ++ ++IPLA++VTKL A C +C K A F+ R ET+ E+IGGSD Y VCR+
Sbjct: 115 FQRKPFTNICELIPLAENVTKLNAVCMYCYKDASFSKRLGNETEIEIIGGSDKYKSVCRK 174
Query: 254 HY 255
Y
Sbjct: 175 CY 176
>gi|330804641|ref|XP_003290301.1| calmodulin-binding protein ThyB [Dictyostelium purpureum]
gi|325079588|gb|EGC33181.1| calmodulin-binding protein ThyB [Dictyostelium purpureum]
Length = 234
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 111/192 (57%), Gaps = 16/192 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG--LDS--IV 126
A + + G+I VI GPMF+GKTT L+RRI+ + +IK +KDTRY +D +V
Sbjct: 2 AIIPTVVGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLV 61
Query: 127 THDGVK---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGK 183
THD PC L + +K+ DVIGIDE QFF D+ F E A+ GK
Sbjct: 62 THDKQNYQAFPCSILEDIREQAEKY--------DVIGIDEGQFFPDVVQFSEELANQ-GK 112
Query: 184 TVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGG 243
TVI+A LDG + R+ F SVID++ A+ +TKLTA C C A F+ R ++ ELIGG
Sbjct: 113 TVIIAALDGTFQRKPFASVIDLVSKAEVITKLTAVCMVCYNDAAFSKRIVDDDNIELIGG 172
Query: 244 SDIYMPVCRQHY 255
D Y+ VCR Y
Sbjct: 173 IDKYISVCRGCY 184
>gi|325558264|gb|ADZ29644.1| thymidine kinase [Cowpox virus]
gi|325558910|gb|ADZ30287.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG+ + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGM-GLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|5830640|emb|CAB54679.1| M2R protein [Variola minor virus]
gi|94483725|gb|ABF22842.1| thymidine kinase [Variola virus]
gi|94484338|gb|ABF23452.1| thymidine kinase [Variola virus]
gi|94485743|gb|ABF24850.1| thymidine kinase [Variola virus]
gi|94487363|gb|ABF26462.1| thymidine kinase [Variola virus]
gi|94487972|gb|ABF27068.1| thymidine kinase [Variola virus]
gi|94489982|gb|ABF29068.1| thymidine kinase [Variola virus]
Length = 177
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++D+IPL++ V KLTA C C K A F+ R ETK E+IGG D+Y VCR+ Y+
Sbjct: 116 KPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETKIEIIGGIDMYQSVCRKCYI 175
>gi|9627600|ref|NP_042123.1| hypothetical protein VARVgp079 [Variola virus]
gi|417222|sp|P04364.2|KITH_VAR67 RecName: Full=Thymidine kinase
gi|62355|emb|CAA47578.1| thymidine kinase [Variola virus]
gi|262438|gb|AAB24675.1| thymidine kinase [Variola major virus]
gi|297259|emb|CAA49020.1| L2R [Variola virus]
gi|438997|gb|AAA60827.1| homolog of vaccinia virus CDS J2R (thymidine kinase); putative
[Variola major virus]
gi|94483930|gb|ABF23046.1| thymidine kinase [Variola virus]
gi|94484133|gb|ABF23248.1| thymidine kinase [Variola virus]
gi|94484542|gb|ABF23655.1| thymidine kinase [Variola virus]
gi|94484740|gb|ABF23852.1| thymidine kinase [Variola virus]
gi|94484938|gb|ABF24049.1| thymidine kinase [Variola virus]
gi|94485136|gb|ABF24246.1| thymidine kinase [Variola virus]
gi|94485338|gb|ABF24447.1| thymidine kinase [Variola virus]
gi|94485541|gb|ABF24649.1| thymidine kinase [Variola virus]
gi|94485946|gb|ABF25052.1| thymidine kinase [Variola virus]
gi|94486147|gb|ABF25252.1| thymidine kinase [Variola virus]
gi|94486350|gb|ABF25454.1| thymidine kinase [Variola virus]
gi|94486553|gb|ABF25656.1| thymidine kinase [Variola virus]
gi|94486755|gb|ABF25857.1| thymidine kinase [Variola virus]
gi|94486958|gb|ABF26059.1| thymidine kinase [Variola virus]
gi|94487161|gb|ABF26261.1| thymidine kinase [Variola virus]
gi|94487567|gb|ABF26665.1| thymidine kinase [Variola virus]
gi|94487768|gb|ABF26865.1| thymidine kinase [Variola virus]
gi|94488175|gb|ABF27270.1| thymidine kinase [Variola virus]
gi|94488375|gb|ABF27469.1| thymidine kinase [Variola virus]
gi|94488575|gb|ABF27668.1| thymidine kinase [Variola virus]
gi|94488776|gb|ABF27868.1| thymidine kinase [Variola virus]
gi|94489176|gb|ABF28266.1| thymidine kinase [Variola virus]
gi|94489376|gb|ABF28465.1| thymidine kinase [Variola virus]
gi|94489578|gb|ABF28666.1| thymidine kinase [Variola virus]
gi|94489778|gb|ABF28865.1| thymidine kinase [Variola virus]
gi|94490187|gb|ABF29272.1| thymidine kinase [Variola virus]
gi|109724122|gb|ABG43248.1| thymidine kinase [Variola virus]
gi|109724326|gb|ABG43451.1| thymidine kinase [Variola virus]
gi|109724528|gb|ABG43652.1| thymidine kinase [Variola virus]
gi|109724733|gb|ABG43856.1| thymidine kinase [Variola virus]
gi|109724936|gb|ABG44058.1| thymidine kinase [Variola virus]
gi|109725140|gb|ABG44261.1| thymidine kinase [Variola virus]
gi|109725345|gb|ABG44465.1| thymidine kinase [Variola virus]
gi|109725548|gb|ABG44667.1| thymidine kinase [Variola virus]
gi|109725752|gb|ABG44870.1| thymidine kinase [Variola virus]
gi|109725955|gb|ABG45072.1| thymidine kinase [Variola virus]
gi|109726159|gb|ABG45275.1| thymidine kinase [Variola virus]
gi|109726565|gb|ABG45679.1| thymidine kinase [Variola virus]
gi|745197|prf||2015436CN L2R gene
Length = 177
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++D+IPL++ V KLTA C C K A F+ R ETK E+IGG D+Y VCR+ Y+
Sbjct: 116 KPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETKIEIIGGIDMYQSVCRKCYI 175
>gi|6646889|gb|AAF21103.1|AF163843_1 thymidine kinase [Ectromelia virus]
Length = 176
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 2 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 60
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 61 EATKLCDVLE-----SITDFSVIGIDEGQFFPDILEFCERMAN-EGKIVIVAALDGTFQR 114
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 115 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 174
>gi|66275891|ref|YP_232976.1| thymidine kinase [Vaccinia virus]
gi|56405060|sp|P68563.1|KITH_VACCV RecName: Full=Thymidine kinase
gi|56405061|sp|P68564.1|KITH_VACCC RecName: Full=Thymidine kinase
gi|61395|emb|CAA26016.1| F8 polypeptide thymidine kinase [2] [Vaccinia virus]
gi|335430|gb|AAA48082.1| putative J2R [Vaccinia virus Copenhagen]
gi|29692200|gb|AAO89373.1| thymidine kinase [Vaccinia virus WR]
gi|37551539|gb|AAQ93191.1| thymidine kinase [Vaccinia virus]
gi|38348961|gb|AAR17937.1| thymidine kinase [Vaccinia virus]
gi|44971446|gb|AAS49796.1| RPXV083 [Rabbitpox virus]
gi|56713465|gb|AAW23505.1| thymidine kinase [Vaccinia virus]
gi|56713749|gb|AAW23787.1| thymidine kinase [Vaccinia virus]
gi|71024940|gb|AAZ17453.1| thymidine kinase [Cowpox virus]
gi|88900712|gb|ABD57624.1| VACV090 [Vaccinia virus]
gi|90660332|gb|ABD97446.1| thymidine kinase [Cowpox virus]
gi|90819754|gb|ABD98564.1| VACV-DUKE-102 [Vaccinia virus]
gi|325558695|gb|ADZ30073.1| thymidine kinase [Cowpox virus]
gi|373447281|gb|AEY72667.1| thymidine kinase [Vaccinia virus]
gi|373447520|gb|AEY72905.1| thymidine kinase [Vaccinia virus]
gi|373447756|gb|AEY73140.1| thymidine kinase [Vaccinia virus]
gi|373447999|gb|AEY73382.1| thymidine kinase [Vaccinia virus]
gi|373448240|gb|AEY73622.1| thymidine kinase [Vaccinia virus]
gi|373448712|gb|AEY74092.1| thymidine kinase [Vaccinia virus]
gi|373448954|gb|AEY74333.1| thymidine kinase [Vaccinia virus]
gi|373449424|gb|AEY74801.1| thymidine kinase [Vaccinia virus]
gi|373449665|gb|AEY75041.1| thymidine kinase [Vaccinia virus]
gi|439965941|gb|AGB75815.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 175
>gi|391334485|ref|XP_003741634.1| PREDICTED: thymidine kinase, cytosolic-like [Metaseiulus
occidentalis]
Length = 202
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 108/187 (57%), Gaps = 12/187 (6%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S G I +IVGPMF+GKTT L+RR++ +IK KD RY +++ THD K+
Sbjct: 17 ASNDGHIQLIVGPMFSGKTTELIRRMRRYDVSNHRCYLIKYAKDDRYDAENVSTHDQAKM 76
Query: 134 P---CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
C L + + F DVIG+DE QFF D+ F + A GK VIVA L
Sbjct: 77 TASVCLRLADVEAAALNF--------DVIGVDEGQFFPDVVCFAEKMAGL-GKVVIVAAL 127
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
DG Y R F +++ ++PL++S+ KL A C C + A FT R ET+ E+IGG+D YM V
Sbjct: 128 DGTYQREGFPNIMKLLPLSESIIKLMAVCMVCYREAAFTKRIGSETEVEIIGGTDKYMAV 187
Query: 251 CRQHYVS 257
CR+ Y S
Sbjct: 188 CRKCYNS 194
>gi|323098692|gb|ADX22929.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EVTKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R F ++ ++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 RPFNNIXNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|313768402|ref|YP_004062082.1| hypothetical protein MpV1_199c [Micromonas sp. RCC1109 virus MpV1]
gi|312599098|gb|ADQ91122.1| hypothetical protein MpV1_199c [Micromonas sp. RCC1109 virus MpV1]
Length = 176
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
+ +I+G MF+GKT+ L+RR++ + + V+ S KDTR + + THD VK C +
Sbjct: 3 LSIIMGNMFSGKTSELIRRLKRLKVIDKQILVVNSAKDTRSPEEVLKTHDNVKFNCFKVY 62
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
L K A++ ++I IDEAQFF +L F D GK VI+AGLDGD +R +
Sbjct: 63 DLYDLMDK---SAFEDAEIIAIDEAQFFPNLKKFVESCLDM-GKDVILAGLDGDAFQRKW 118
Query: 200 GSVIDIIPLADSVTKLTARCEFCGKRAF--FTLRKTEETKTELIGGSDIYMPVCRQH 254
G ++D IP+A VTKL+A C CG FT R E T+ ELIGGSD+Y VC++H
Sbjct: 119 GELLDCIPMATEVTKLSALCMRCGNGNMGPFTKRTVENTELELIGGSDMYEAVCQKH 175
>gi|6646887|gb|AAF21102.1|AF163842_1 thymidine kinase [Cotia virus]
gi|2570632|gb|AAB82192.1| thymidine kinase [BeAn 58058 virus]
Length = 176
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 2 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 60
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 61 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 114
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 115 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 174
>gi|257167810|gb|ACV49687.1| thymidine kinase [Vaccinia virus]
Length = 175
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 1 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 59
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 60 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 113
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 114 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 173
>gi|407041310|gb|EKE40657.1| thymidine kinase domain containing protein [Entamoeba nuttalli P19]
Length = 218
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 111/195 (56%), Gaps = 13/195 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG-LDSIVTHD---GVKL 133
G I +I+GPMF+GKTT L+R I+ + VIK +KDTRYG D ++HD +
Sbjct: 24 GSIQLIIGPMFSGKTTELIRLIKRFRYSKKTTVVIKYSKDTRYGSEDEAISHDKESWKAI 83
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P L L + +VIGIDE QFF DL +F A + G++VI+A LDG
Sbjct: 84 PTMKLMPLLETALNY--------EVIGIDEGQFFPDLIEFSEACASY-GRSVIIAALDGT 134
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ R+ FG + +IPL +SV KL+A C CGK+A F+LR + E E+IGG D Y VCR+
Sbjct: 135 FQRKPFGQITSLIPLCESVKKLSAVCVNCGKKAAFSLRISSEESIEVIGGVDKYCAVCRK 194
Query: 254 HYVSGQVVVEAARIV 268
+ ++ R V
Sbjct: 195 CFYKDGATLKTQRSV 209
>gi|257167812|gb|ACV49688.1| thymidine kinase [Vaccinia virus]
Length = 174
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 1 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 59
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 60 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 113
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 114 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 173
>gi|113195274|ref|YP_717404.1| thymidine kinase [Taterapox virus]
gi|71024938|gb|AAZ17452.1| thymidine kinase [Taterapox virus]
gi|90660550|gb|ABD97663.1| thymidine kinase [Taterapox virus]
Length = 177
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR+ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVTRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++D+IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|312599330|gb|ADQ91353.1| hypothetical protein BpV2_186c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 172
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
+ +I+G MF+GKT+ L+RR++ G+ + VI S KDTR D + THD V+ C
Sbjct: 3 LKIIMGNMFSGKTSELIRRLKRYKVIGKRILVINSKKDTRASEDVLRTHDNVRFDCIKTN 62
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
+L + DVI IDEAQFF L F + D GKT+++AGLDGDY +R F
Sbjct: 63 SLDEV-------DFSNADVIAIDEAQFFTGLKTFVEKVLDS-GKTILLAGLDGDYKQRKF 114
Query: 200 GSVIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
G +ID +PLAD V K++A C C G FT R + + EL+G D+Y VCR+H
Sbjct: 115 GELIDCVPLADKVFKISAMCMECMDGTHGPFTKRIVQNDELELVGDHDMYRAVCRKH 171
>gi|167388362|ref|XP_001738537.1| thymidine kinase, cytosolic [Entamoeba dispar SAW760]
gi|165898206|gb|EDR25139.1| thymidine kinase, cytosolic, putative [Entamoeba dispar SAW760]
Length = 229
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 9/191 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG-LDSIVTHDGVKLPCC 136
G I +I+GPMF+GKTT L+R I+ + VIK +KDTRYG D ++HD
Sbjct: 24 GSIQLIIGPMFSGKTTELIRLIRRFKYSKKTTVVIKYSKDTRYGSEDETMSHDKESWKAI 83
Query: 137 -ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
A+ + G +VIGIDE QFF DL +F A + G++VI+A LDG +
Sbjct: 84 PAMRLMPLLETALG------YEVIGIDEGQFFPDLIEFSETCASY-GRSVIIAALDGTFQ 136
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R+ FG + ++IPL ++V KL+A C CGK+A F+LR + E E+IGG+D Y VCR+ +
Sbjct: 137 RKPFGQITNLIPLCENVKKLSAICVNCGKKAAFSLRISTEESIEVIGGADKYCAVCRKCF 196
Query: 256 VSGQVVVEAAR 266
+++ +
Sbjct: 197 FKDAAMLKTQK 207
>gi|54306346|gb|AAV33361.1| thymidine kinase [Canarypox virus]
Length = 179
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY---GLDSIVTHDGVK 132
+GEI +I GPMF+GKT+ L+R I+ T GRN +IK D RY L+S+ THD +
Sbjct: 2 ATGEIRLITGPMFSGKTSELIRLIKRFTISGRNCIIIKHCCDNRYIDKDLESVCTHDKIT 61
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ + L K D +VIG+DE QFFED+ +F E + GK VI+A L+G
Sbjct: 62 MKALSCDKLLPLMPKM-----DGFEVIGVDEGQFFEDIVEF-SEIMANKGKIVIIAALNG 115
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+ R FG++ ++ L++SVT LTA C C A F+ R T++ ++IGG +IY VCR
Sbjct: 116 DFKRELFGNIFKLLSLSESVTSLTAICAVCKNEASFSKRTTDDKDIKVIGGKEIYTAVCR 175
Query: 253 QHYV 256
+ ++
Sbjct: 176 KCFL 179
>gi|6646891|gb|AAF21104.1|AF163844_1 thymidine kinase [Cowpox virus]
Length = 176
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 2 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 60
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + V+GIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 61 EATKLYDVLE-----SITDFSVVGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 114
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 115 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 174
>gi|22095806|sp|Q9JFB7.1|KITH_VACCT RecName: Full=Thymidine kinase
gi|6969741|gb|AAF33953.1| TJ2R [Vaccinia virus Tian Tan]
Length = 177
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +++GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLMIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 175
>gi|313844169|ref|YP_004061832.1| hypothetical protein OlV1_200c [Ostreococcus lucimarinus virus
OlV1]
gi|312599554|gb|ADQ91576.1| hypothetical protein OlV1_200c [Ostreococcus lucimarinus virus
OlV1]
Length = 219
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 110/181 (60%), Gaps = 6/181 (3%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I+G MF+GKT+ L+RR++ G+ + VI S KDTR + + THDGV+ PC + +
Sbjct: 21 IIMGNMFSGKTSELIRRLKRYKVIGKKIVVINSAKDTRSPEEVLKTHDGVEFPCLKVEHI 80
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGS 201
S K +++ D++ IDEAQFF +L +F + K+VI+AGLDGDY +R FG
Sbjct: 81 SHCIIK---ESFCNADIVAIDEAQFFSNLQEFVQMCL-FLKKSVIMAGLDGDYKQRKFGE 136
Query: 202 VIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQ 259
VID IPLA V KL+A C C G FT R + K EL+GG++ Y VCR+H S
Sbjct: 137 VIDCIPLASDVVKLSALCMDCKNGTPGPFTKRIVQSDKLELVGGNESYKAVCRRHLESMD 196
Query: 260 V 260
V
Sbjct: 197 V 197
>gi|126308689|ref|XP_001371195.1| PREDICTED: thymidine kinase, cytosolic [Monodelphis domestica]
Length = 234
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 117/194 (60%), Gaps = 19/194 (9%)
Query: 75 SPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG- 130
SPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY + THD
Sbjct: 13 SPSKVRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-KNFSTHDRN 71
Query: 131 --VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ +A V VIGIDE QFF D+ +F E + GKT+IVA
Sbjct: 72 TMEALPACLLRDVAQ-------NAL-AVTVIGIDEGQFFPDIVEF-SETMANAGKTIIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 123 ALDGTFQRKAFGNILNLVPLAESVVKLTAVCMECFREAAYTKRLGIEKEVEVIGGADKYH 182
Query: 249 PVCRQHY---VSGQ 259
VCR Y VSGQ
Sbjct: 183 SVCRLCYFKKVSGQ 196
>gi|30519468|emb|CAD90643.1| S2R protein [Cowpox virus]
gi|325559122|gb|ADZ30498.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|17974999|ref|NP_536513.1| L2R [Monkeypox virus Zaire-96-I-16]
gi|22096356|sp|P04363.2|KITH_MONPV RecName: Full=Thymidine kinase
gi|17529866|gb|AAL40544.1|AF380138_86 L2R [Monkeypox virus Zaire-96-I-16]
Length = 177
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPM +GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMLSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EVTKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 RPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|378706312|gb|AFC35113.1| hypothetical protein OtV6_205c [Ostreococcus tauri virus RT-2011]
Length = 176
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
+ +I+G MF+GKT+ L+RR++ + + V+ S KDTR + THD VK C +
Sbjct: 3 LSIIMGNMFSGKTSELIRRLKRLKILEKRIVVVNSAKDTRSPEQVLKTHDNVKFDCYKVL 62
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
L K DA++ +++ IDEAQFF +L F D GK VI+AGLD D +R +
Sbjct: 63 DLYELLNK---DAFEDAEIVAIDEAQFFPNLKKFVECCLDM-GKDVIIAGLDADAFQRKW 118
Query: 200 GSVIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
G ++D +P+A VTKL+A C++C G+ FT R + + ELIGGSD+Y+ VCR+H
Sbjct: 119 GEILDCVPIACEVTKLSALCKYCRSGRPGPFTKRIVDNSDLELIGGSDMYVAVCRKH 175
>gi|123475775|ref|XP_001321063.1| thymidine kinase family protein [Trichomonas vaginalis G3]
gi|121903882|gb|EAY08840.1| thymidine kinase family protein [Trichomonas vaginalis G3]
Length = 350
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 107/186 (57%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KL 133
+G I VIVGPMFAGKTT +LRRI R V V+K +KD RY ++ + THD +
Sbjct: 3 AGRIEVIVGPMFAGKTTEMLRRINRAEHGHRRVVVMKYDKDQRYSVNKVSTHDEYMHDAI 62
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
PC L L + G +VIG+DE QFF D+ +F + A+ G+TVIVA LDG
Sbjct: 63 PCNML--LPHLEECLG------YEVIGVDEGQFFPDVVEFSEKLANF-GRTVIVAALDGT 113
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ R+ FG V+D++ +S+TKL+A C G A F+ R T ELIGGS+ Y+ R
Sbjct: 114 FQRKPFGKVLDLMSKCESITKLSAVCSQTGSEAAFSKRIVNSTDVELIGGSESYVAASRA 173
Query: 254 HYVSGQ 259
+ Q
Sbjct: 174 AFFGIQ 179
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I++ VGP+ +GKTT LLR + GR ++ + ++ LP
Sbjct: 181 SGMINLTVGPIKSGKTTELLRVLNRYLIAGRKAICLRPESAHDFHKSNVEIKFIQNLPSI 240
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ +Q D+IGIDEAQ FE++ D+ E A+ GK V+V+ +DG+
Sbjct: 241 --------------EELNQYDIIGIDEAQNFENIADWADELAN-SGKVVMVSAVDGNENH 285
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFT 229
++ S++++ P + VTKL + C G A FT
Sbjct: 286 VAYPSIVELFPRCEKVTKLDSICPLTGLPAPFT 318
>gi|94488977|gb|ABF28068.1| thymidine kinase [Variola virus]
gi|109726362|gb|ABG45477.1| thymidine kinase [Variola virus]
Length = 177
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 103/180 (57%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----VITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++D+IPL++ V KLTA C C K A F+ R ETK E+IGG D+Y VCR+ Y+
Sbjct: 116 KPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETKIEIIGGIDMYQSVCRKCYI 175
>gi|145687744|gb|ABP88849.1| thymidine kinase [Cowpox virus]
gi|325514109|gb|ADZ24103.1| thymidine kinase [Cowpox virus]
Length = 176
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|18640326|ref|NP_570482.1| CMLV092 [Camelpox virus]
gi|18483002|gb|AAL73799.1|AF438165_89 thymidine kinase [Camelpox virus M-96]
gi|262219|gb|AAB24618.1| thymidine kinase [Camelpox virus]
gi|19718038|gb|AAG37563.1| CMP91R [Camelpox virus CMS]
Length = 177
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++DIIPL++ V KLTA C C K A F+ R ET+ E+IGG+ +Y VCR+ Y+
Sbjct: 116 KPFNNILDIIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNGMYQSVCRKCYI 175
>gi|22095802|sp|Q90029.1|KITH_RACVI RecName: Full=Thymidine kinase
gi|473607|gb|AAA93128.1| thymidine kinase [Raccoonpox virus]
gi|71024942|gb|AAZ17454.1| thymidine kinase [Raccoonpox virus]
Length = 177
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 105/181 (58%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK DTRYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCITIKYTNDTRYG-TGLWTHDKHNFSAM 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + DA VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 ETTKLLNI-----IDAVTDFSVIGIDEGQFFPDIVEFCEYMAN-NGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F ++ ++IPL++ V KLTA C C K A F+ R ET+ E+IGG D+Y VCR+ Y+
Sbjct: 116 KPFTTISNLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETEIEIIGGEDMYQSVCRKCYI 175
Query: 257 S 257
+
Sbjct: 176 N 176
>gi|373449183|gb|AEY74561.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 4 GHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALE 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L + + VIGIDE QFF D+ +FC A+ + K VIVA LDG + R+
Sbjct: 63 ATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMANEE-KIVIVAALDGTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 117 PFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 175
>gi|412993763|emb|CCO14274.1| thymidine kinase [Bathycoccus prasinos]
Length = 365
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 21/197 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY----GLDSIVTHDGVK 132
+G+I +I GPMF+GK+T L RRI+ GR+V +IK DTRY G ++ VTHD
Sbjct: 24 NGKIELIFGPMFSGKSTELHRRIRRHKIAGRSVLLIKYKDDTRYAHICGSNANVTHDHQT 83
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
LP + L + DVIGIDE QFF D+ FC A+ GK VI A LDG
Sbjct: 84 LPAHSAKELMGNMDNIAHN----YDVIGIDEGQFFGDVVAFCDRWANK-GKVVICAALDG 138
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------------KTEETKTEL 240
Y R F ++ ++P+A+SV KLT+ C C K A FTLR + E+ EL
Sbjct: 139 TYEREMFNDILKLVPMAESVDKLTSVCAMCSKDASFTLRCFDSSKNSSREKEEEDGPVEL 198
Query: 241 IGGSDIYMPVCRQHYVS 257
IGG+++Y CR+ Y +
Sbjct: 199 IGGAEMYKAACRKCYFA 215
>gi|260666065|ref|YP_003213019.1| hypothetical protein H665_p196 [Ostreococcus tauri virus 1]
gi|260161083|emb|CAY39784.1| hypothetical protein OTV1_196 [Ostreococcus tauri virus 1]
Length = 183
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I+G MF+GKT+ L+RR++ G+ + VI S KDTR + + THDG++ PC + +
Sbjct: 5 IIMGNMFSGKTSELIRRLKRYRIIGKKIVVINSTKDTRSPEEVLKTHDGIEFPCIKVDHI 64
Query: 142 SS--FRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
S +Q F DA +++ IDEAQFF++L DF + GK+VI+AGLDGDY ++ F
Sbjct: 65 SHCIVKQSF-CDA----EIVAIDEAQFFKNLKDFV-DMCLFLGKSVILAGLDGDYQQKKF 118
Query: 200 GSVIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
G V+D IP+A V KL+A C C G FT R + + EL+GG D+Y VCR+H S
Sbjct: 119 GEVLDCIPMASDVVKLSALCMDCRNGTPGPFTKRIVQSDELELVGGKDMYKAVCRRHLES 178
Query: 258 GQV 260
V
Sbjct: 179 MDV 181
>gi|111184281|gb|ABH08201.1| HSPV095 [Horsepox virus]
Length = 177
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 104/181 (57%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + VIGIDE QFF D+ +FC A+ + K VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----LITDFSVIGIDEGQFFPDIVEFCERMANEE-KIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ YV
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYV 175
Query: 257 S 257
Sbjct: 176 G 176
>gi|333616|gb|AAA47227.1| thymidine kinase (EC 2.1.7.21) [Rabbit fibroma virus]
Length = 176
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G IH+I+GPMFAGK+T L+R ++ V+K KD RYG + + THD + +
Sbjct: 3 GGHIHLIIGPMFAGKSTELIRLVRRYQIAKHKCLVVKYEKDIRYG-NGVCTHDNMSITAV 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+L K S A + +VIGIDE QFF ++ FC A+ GK +IVA LDG + R
Sbjct: 62 CTPSL----DKIDSVA-ENAEVIGIDEGQFFPNIATFCERMANR-GKVLIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ F ++ ++IPLA++VTKL A C +C K F+ R ++ + E+IGGSD Y VCR+ Y
Sbjct: 116 KPFSNISELIPLAENVTKLNAVCMYCYKNGSFSKRLGDKMEIEVIGGSDKYKSVCRKCY 174
>gi|325558478|gb|ADZ29857.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|325558048|gb|ADZ29429.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIIEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>gi|88854142|gb|ABD52560.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----LITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ ++IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIKIIGGNDMYQSVCRKCYI 175
>gi|163955199|ref|YP_001648303.1| hypothetical protein OsV5_227r [Ostreococcus virus OsV5]
gi|163638648|gb|ABY28007.1| hypothetical protein OsV5_227r [Ostreococcus virus OsV5]
Length = 183
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 10/180 (5%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I+G MF+GKT+ L+RR++ G+ + VI S KDTR + + THDG++ PC + +
Sbjct: 5 IIMGNMFSGKTSELIRRLKRYRIIGKKIVVINSAKDTRSPEEVLKTHDGIEFPCIKVDHI 64
Query: 142 SS--FRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
S +Q F DA +++ IDEAQFF++L DF + GK+VI+AGLDGDY ++ F
Sbjct: 65 SHCIVKQSF-CDA----EIVAIDEAQFFKNLKDFV-DMCLFLGKSVILAGLDGDYQQKKF 118
Query: 200 GSVIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
G V+D IP+A V KL+A C C G FT R + + EL+GG D+Y VCR+H S
Sbjct: 119 GEVLDCIPMASDVVKLSALCMDCRNGTPGPFTKRIVQSDELELVGGKDMYKAVCRRHLES 178
>gi|119390440|pdb|2J87|A Chain A, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
gi|119390441|pdb|2J87|B Chain B, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
gi|119390442|pdb|2J87|C Chain C, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
gi|119390443|pdb|2J87|D Chain D, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
Length = 177
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 105/181 (58%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L Q + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLQ-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F ++++++ L++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ YV
Sbjct: 116 KPFNNILNLLILSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYV 175
Query: 257 S 257
Sbjct: 176 G 176
>gi|9633870|ref|NP_051950.1| gp061R [Rabbit fibroma virus]
gi|363548427|sp|P07605.2|KITH_RFVKA RecName: Full=Thymidine kinase
gi|6578589|gb|AAF17943.1|AF170722_61 gp061R [Rabbit fibroma virus]
Length = 178
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G IH+I+GPMFAGK+T L+R ++ V+K KD RYG + + THD + +
Sbjct: 5 GGHIHLIIGPMFAGKSTELIRLVRRYQIAKHKCLVVKYEKDIRYG-NGVCTHDNMSITAV 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+L K S A + +VIGIDE QFF ++ FC A+ GK +IVA LDG + R
Sbjct: 64 CTPSL----DKIDSVA-ENAEVIGIDEGQFFPNIATFCERMANA-GKVLIVAALDGTFQR 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ F ++ ++IPLA++VTKL A C +C K F+ R ++ + E+IGGSD Y VCR+ Y
Sbjct: 118 KPFSNISELIPLAENVTKLNAVCMYCYKNGSFSKRLGDKMEIEVIGGSDKYKSVCRKCY 176
>gi|54306338|gb|AAV33354.1| thymidine kinase [Canarypox virus]
Length = 179
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY---GLDSIVTHDGVK 132
+GEI +I GPMF+GKT+ L+R I+ T GR +IK D RY L+S+ THD +
Sbjct: 2 ATGEIRLITGPMFSGKTSELIRLIKRFTISGRKCIIIKHCCDNRYIDKDLESVCTHDKIT 61
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ + L K D +VIG+DE QFFED+ +F E + GK VI+A L+G
Sbjct: 62 MKALSCDKLLPLMPKM-----DGFEVIGVDEGQFFEDIVEF-SEIMANKGKIVIIAALNG 115
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+ R FG++ ++ L++SVT LTA C C A F+ R T++ ++IGG +IY VCR
Sbjct: 116 DFKRELFGNIFKLLSLSESVTSLTAICAVCKNEASFSKRTTDDKDIKVIGGKEIYTAVCR 175
Query: 253 QHYV 256
+ ++
Sbjct: 176 KCFL 179
>gi|325559335|gb|ADZ30710.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+++Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNEMYQSVCRKCYI 175
>gi|20178469|ref|NP_619890.1| CPXV105 protein [Cowpox virus]
gi|20153087|gb|AAM13548.1|AF482758_99 CPXV105 protein [Cowpox virus]
Length = 177
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLYDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+++Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNEMYQSVCRKCYI 175
>gi|225719542|gb|ACO15617.1| Thymidine kinase, cytosolic [Caligus clemensi]
Length = 196
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-GLDSIV 126
H S + G+I +I+GPMF+GK+T L+RR++ +K KDTRY +SI
Sbjct: 12 HFSQSGALAQGQIQLIIGPMFSGKSTELIRRLRRYQSATYTCLNVKYAKDTRYDNGESIS 71
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVI 186
THD + L +L R+K A D VIGIDE QFF D+ FC A+ +GK V+
Sbjct: 72 THDKIALEAVPAVSLEDIREK----AKD-FQVIGIDEGQFFPDIVSFCESMAN-EGKIVL 125
Query: 187 VAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDI 246
VA LD + R+ F +++++IPL+++VTKL + C C +T R T+ + E+IGG++
Sbjct: 126 VAALDATFQRKGFPNIMELIPLSENVTKLNSVCMVCHGEGSYTKRTTDSKEVEVIGGAEA 185
Query: 247 YMPVCRQHY 255
Y VCR Y
Sbjct: 186 YQSVCRTCY 194
>gi|225709914|gb|ACO10803.1| Thymidine kinase [Caligus rogercresseyi]
Length = 195
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 109/191 (57%), Gaps = 12/191 (6%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRI---QAETQKGRNVAVIKSNKDTRYGLDS 124
H S SG+I +I+GPMF+GK+T L+RR+ Q+ T K N IK KD RY
Sbjct: 12 HLSVSGGMSSGQIQLIIGPMFSGKSTELIRRLRRYQSATYKCMN---IKYAKDVRYDNGG 68
Query: 125 IVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKT 184
I THD L + +L ++ + VIGIDE QFF D+ FC A+ GK
Sbjct: 69 IATHDKTVLEAIPVVSLEEITER-----AKEYHVIGIDEGQFFPDIVSFCENMAN-AGKI 122
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
V+VA LD + R+ F +++++IPL+++VTKL + C C +T R T+ + ELIGG+
Sbjct: 123 VLVAALDATFQRKGFPNIMELIPLSENVTKLNSVCMVCHGEGSYTKRTTDSKEVELIGGA 182
Query: 245 DIYMPVCRQHY 255
+ Y VCR+ Y
Sbjct: 183 EAYKSVCRKCY 193
>gi|225708976|gb|ACO10334.1| Thymidine kinase [Caligus rogercresseyi]
Length = 195
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVT 127
H S SG+I +I+GPMF+GK+T L+RR++ IK KD RY I T
Sbjct: 12 HLSVSGGMSSGQIQLIIGPMFSGKSTELIRRLRRYQSATYKCMSIKYAKDVRYDNGGIAT 71
Query: 128 HDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
HD L + +L ++ + VIGIDE QFF D+ FC A+ GK V+V
Sbjct: 72 HDKTVLEAIPVVSLEEITER-----AKEYHVIGIDEGQFFPDIVSFCENMAN-AGKIVLV 125
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LD + R+ F +++++IPL+++VTKL + C C +T R T+ + ELIGG++ Y
Sbjct: 126 AALDATFQRKGFPNIMELIPLSENVTKLNSVCMVCHGEGSYTKRTTDSKEVELIGGAEAY 185
Query: 248 MPVCRQHY 255
VCR+ Y
Sbjct: 186 KSVCRKCY 193
>gi|345317661|ref|XP_001521037.2| PREDICTED: thymidine kinase, cytosolic-like [Ornithorhynchus
anatinus]
Length = 247
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 107/177 (60%), Gaps = 13/177 (7%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG---VKLPCCAL 138
VI+GPMF+GK+T L+RR++ VIK KD RYG S THD LP C L
Sbjct: 37 VILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDVRYG-HSFSTHDRNTMEALPACVL 95
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
++ DA V VIGIDE QFF D +F EA + GKTVIVA LDG + R++
Sbjct: 96 RDVTQ-------DALG-VAVIGIDEGQFFPDTVEF-SEAMANAGKTVIVAALDGTFQRKA 146
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 147 FGTILNLVPLAESVVKLTAVCMECFRDASYTKRLGAEKEVEVIGGADKYHAVCRVCY 203
>gi|432847927|ref|XP_004066219.1| PREDICTED: thymidine kinase, cytosolic-like [Oryzias latipes]
Length = 223
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 102/178 (57%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T LLRR++ VIK DTRY + THD +
Sbjct: 18 GQIQVIFGPMFSGKSTELLRRVRRFQVAQYKCLVIKYAGDTRYSDTGVATHDKNTMEAIP 77
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+LS R A + VIGIDE QFF D +F E A+ GKTVIVA LD + R+
Sbjct: 78 ANSLSDVRA-----AALKACVIGIDEGQFFPDTVEFSEEMANL-GKTVIVAALDATFQRK 131
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG+++ ++PLA+SV KL A C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 132 PFGNILSLVPLAESVVKLHAVCMQCYREAAYTKRIGVEKEVEVIGGADKYQAVCRTCY 189
>gi|71024944|gb|AAZ17455.1| thymidine kinase [Volepox virus]
Length = 177
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 4 GHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCITIKYSNDNRYG-TGLWTHDRNNFSATE 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L + D VIGIDE QFF D+ +FC E ++GK VIVA LDG + R+
Sbjct: 63 TTNLLTI-----VDTVANFSVIGIDEGQFFPDIVEFC-ELMANNGKIVIVAALDGTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F ++ ++IPL++ V KLTA C C K A F+ R ET E+IGG D+Y VCR+ Y+
Sbjct: 117 PFTTISNLIPLSEMVVKLTAVCMKCFKEASFSKRLGSETAIEVIGGKDMYQSVCRKCYI 175
>gi|355724315|gb|AES08189.1| thymidine kinase 1, soluble [Mustela putorius furo]
Length = 240
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 110/196 (56%), Gaps = 9/196 (4%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY THD
Sbjct: 14 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SRFSTHDR 72
Query: 131 VKLPCCALTTLSSFRQK-FGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
+ + L Q+ G V VIGIDE QFF D F E + GKTVIVA
Sbjct: 73 NTMEALPASLLRDVAQEALG------VAVIGIDEGQFFPDXXXF-SETMANAGKTVIVAA 125
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 126 LDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGSEKEVEVIGGADKYHS 185
Query: 250 VCRQHYVSGQVVVEAA 265
VCR Y + AA
Sbjct: 186 VCRLCYFKKPAGLPAA 201
>gi|211956346|ref|YP_002302415.1| thymidine kinase [Deerpox virus W-1170-84]
gi|115503141|gb|ABI99059.1| thymidine kinase [Deerpox virus W-1170-84]
Length = 191
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 13/183 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV-THDGVKLPC 135
+G I +I+GPMF+GK+T L+R ++ +IK +KD RYG D + THD + +P
Sbjct: 13 NGTIQLILGPMFSGKSTELIRLLRRYQLAKYKCNIIKYSKDDRYGNDEFLYTHDKLSIPA 72
Query: 136 CALTTLSSFRQKFGSDAYDQ---VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ TL+ +AY VDVIGIDE QFF D+ +F E+ + GK VI+A LDG
Sbjct: 73 ISSKTLN--------EAYSHIIDVDVIGIDEGQFFPDIVNF-SESMANIGKIVIIAALDG 123
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y R F ++ +IPL++ V KL A C C A F+ R ++E + E+IGGS+ Y VCR
Sbjct: 124 TYKRSPFNDILQLIPLSEKVIKLNAVCMNCCGEASFSKRISDEKEIEIIGGSEKYKSVCR 183
Query: 253 QHY 255
+ Y
Sbjct: 184 KCY 186
>gi|62637452|ref|YP_227450.1| Thymidine kinase [Deerpox virus W-848-83]
gi|115503312|gb|ABI99230.1| thymidine kinase [Deerpox virus W-848-83]
Length = 191
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 13/183 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV-THDGVKLPC 135
+G I +I+GPMF+GK+T L+R ++ +IK +KD RYG D + THD + +P
Sbjct: 13 NGSIQLILGPMFSGKSTELIRLLRRYQLAKYKCNIIKYSKDDRYGNDEFLYTHDKLSIPA 72
Query: 136 CALTTLSSFRQKFGSDAYDQ---VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ TL+ +AY VDVIGIDE QFF D+ +F A+ GK VI+A LDG
Sbjct: 73 ISSKTLN--------EAYSHIIDVDVIGIDEGQFFPDIVNFSESMANI-GKIVIIAALDG 123
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y R F ++ +IPL++ V KL A C C A F+ R ++E + E+IGGS+ Y VCR
Sbjct: 124 TYKRSPFNDILQLIPLSEKVIKLNAVCMNCYGDASFSKRISDEKEIEIIGGSEKYKSVCR 183
Query: 253 QHY 255
+ Y
Sbjct: 184 KCY 186
>gi|167524627|ref|XP_001746649.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774919|gb|EDQ88545.1| predicted protein [Monosiga brevicollis MX1]
Length = 1562
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 96/145 (66%), Gaps = 6/145 (4%)
Query: 111 VIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDL 170
+IK KDTRYG+D ++THD + A ++L+ D+ DVIGIDE QFF DL
Sbjct: 1375 LIKYAKDTRYGIDGVITHDHQRSTAKACSSLAEV-----EDSAMDYDVIGIDEGQFFPDL 1429
Query: 171 YDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTL 230
+FC EAA+ GKTVIVA LDG + R+ F +V+++IPL+++V KL A C C K A F+
Sbjct: 1430 VNFCEEAANQ-GKTVIVAALDGTFQRKPFPNVMELIPLSEAVDKLQAVCVRCFKDASFSK 1488
Query: 231 RKTEETKTELIGGSDIYMPVCRQHY 255
R ET+ E+IGGSD Y+ VCR+ Y
Sbjct: 1489 RLGTETQVEVIGGSDKYVAVCRECY 1513
>gi|15150505|ref|NP_150500.1| LSDV066 thymidine kinase [Lumpy skin disease virus NI-2490]
gi|125426|sp|P16600.1|KITH_SHEVK RecName: Full=Thymidine kinase
gi|221123|dbj|BAA00324.1| thymidine kinase [Sheeppox virus]
gi|15149077|gb|AAK85027.1| LSDV066 thymidine kinase [Lumpy skin disease virus NI-2490]
gi|22595601|gb|AAN02634.1| thymidine kinase [Lumpy skin disease virus NW-LW]
gi|22595759|gb|AAN02791.1| thymidine kinase [lumpy skin disease virus]
Length = 177
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R ++ V+K KD RYG +S+ THD + +
Sbjct: 4 GYIHLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLKDIRYG-NSVYTHDNNHVSAIS 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L K + D+IGIDE QFF+D+ F A+ GK +I+A LD + R+
Sbjct: 63 TTLLYDVVDKIMN-----FDIIGIDEGQFFKDIVSFSENMANM-GKIIIIAALDSTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F ++ +IPL++ VTKL A C C K A F+ R T+E + ELIGG + Y VCR+ Y
Sbjct: 117 EFNDILKLIPLSEKVTKLNAVCMECYKDAAFSKRITKEKEIELIGGKEKYKSVCRKCY 174
>gi|202075|gb|AAA40452.1| cytosolic thymidine kinase [Mus musculus]
Length = 206
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 106/172 (61%), Gaps = 13/172 (7%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KLPCCALTTLSS 143
MF+GK+T L+RR++ VIK KDTRY +S THD LP C L ++
Sbjct: 1 MFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRNTMDALPACMLRDVT- 58
Query: 144 FRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVI 203
++ G V VIGIDE QFF D+ DFC E ++GKTVIVA LDG + R++FGS++
Sbjct: 59 -QELLG------VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIVAALDGTFQRKAFGSIL 110
Query: 204 DIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+++PLA+SV KLTA C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 111 NLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKYHSVCRLCY 162
>gi|71024946|gb|AAZ17456.1| thymidine kinase [Skunkpox virus]
Length = 176
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 101/180 (56%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I+GPMF+GK+T L+RR++ IK D RYG + THD
Sbjct: 4 GHIQLIIGPMFSGKSTELIRRVRRYQITQYKCITIKYTNDNRYG-TGVWTHDRNNFSAIE 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L + D VIGIDE QFF D+ +FC E ++GK VIVA LDG + R+
Sbjct: 63 TTNLLTI-----VDTVANFSVIGIDEGQFFPDIVEFC-ELMANNGKIVIVAALDGTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
F ++ ++IPL++ V KLT C C K A F+ R ETK E+IGG D+Y VC + YV+
Sbjct: 117 PFTTISNLIPLSEMVVKLTPVCMKCFKEASFSKRLGIETKIEIIGGEDMYQSVCTKCYVN 176
>gi|255088409|ref|XP_002506127.1| thymidine kinase [Micromonas sp. RCC299]
gi|226521398|gb|ACO67385.1| thymidine kinase [Micromonas sp. RCC299]
Length = 388
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Query: 68 HSEASVS-SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY----GL 122
H+E VS +P G + VI GPMF+GK+T L RRI+ R V+K DTRY G
Sbjct: 11 HAEGVVSTAPRGTLQVIFGPMFSGKSTELARRIRRHKVANRQCIVVKYAGDTRYEDEPGR 70
Query: 123 DSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVD-------VIGIDEAQFFEDLYDFCR 175
T D L C +T + + A + VD V+GIDE QFF DL +FC
Sbjct: 71 AEAGTADAANLRGCVVTHDRQALVAYPARALEDVDNVVHAFDVVGIDEGQFFGDLVEFCE 130
Query: 176 EAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEE 235
A GKTVIVA LD + R+ F V+ ++P+A+ VTKL+A C CG A FT R
Sbjct: 131 RWARM-GKTVIVAALDATFQRKPFNDVLSLVPIAEDVTKLSAVCNACGCDASFTKRVGSS 189
Query: 236 TKT-ELIGGSDIYMPVCR 252
+T ELIGG +Y+ CR
Sbjct: 190 DETVELIGGEGMYVATCR 207
>gi|22087365|gb|AAM90949.1| thymidine kinase [Aracatuba virus]
gi|71841844|gb|AAZ43191.1| thymidine kinase [Vaccinia virus]
Length = 164
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I+GPMF+GK+T L+RR++ IK + D RYG + THD T L
Sbjct: 1 LIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEALEATKL 59
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGS 201
+ + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R+ F +
Sbjct: 60 CDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQRKPFNN 113
Query: 202 VIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR
Sbjct: 114 ILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCR 164
>gi|82408797|gb|ABB73192.1| thymidine kinase, partial [Vaccinia virus]
Length = 163
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
Query: 83 IVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLS 142
I+GPMF+GK+T L+RR++ IK + D+RYG + THD T L
Sbjct: 1 IIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDSRYG-TGLWTHDKNNFEALEATKLC 59
Query: 143 SFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSV 202
+ + VIGIDE QFF D+ +FC A ++GK VIVA LDG + R+ F ++
Sbjct: 60 DVLE-----SITDFSVIGIDEGQFFPDIVEFCERTA-NEGKIVIVAALDGTFQRKPFNNI 113
Query: 203 IDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR
Sbjct: 114 LNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCR 163
>gi|196013900|ref|XP_002116810.1| hypothetical protein TRIADDRAFT_31584 [Trichoplax adhaerens]
gi|190580528|gb|EDV20610.1| hypothetical protein TRIADDRAFT_31584, partial [Trichoplax
adhaerens]
Length = 201
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 12/177 (6%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD---GVKLPCCAL 138
+I+GPMF+GKTT L+RR++ ++ +IK D RY D + THD + L
Sbjct: 1 LILGPMFSGKTTELMRRVRRLQIGNQSCVIIKYANDNRYDKDGVATHDLQIAKAISSNDL 60
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
++ S + +G VIGIDE QFF D+ F A+ GK VIVA LDG + R+
Sbjct: 61 FSIESQAESYG--------VIGIDEGQFFPDVVPFAEHMANK-GKLVIVAALDGTFQRKG 111
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG +++IPLA+ V KL+A C C FT R + E E+IGG+D YM VCR Y
Sbjct: 112 FGDFLNLIPLAEDVMKLSAVCMLCYSEGAFTKRLSSEQTVEVIGGTDKYMAVCRNCY 168
>gi|77862254|gb|ABB04423.1| thymidine kinase, partial [Guarani P1 virus]
gi|77862256|gb|ABB04424.1| thymidine kinase, partial [Guarani P2 virus]
gi|267847121|gb|ACY80701.1| thymidine kinase [Vaccinia virus Mariana]
Length = 163
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 7/170 (4%)
Query: 83 IVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLS 142
I+GPMF+GK+T L+RR++ IK + D RYG + THD T L
Sbjct: 1 IIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEALEATKLC 59
Query: 143 SFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSV 202
+ + VIGIDE QFF D+ +FC A ++GK VIVA LDG + R+ F ++
Sbjct: 60 DVLE-----SITDFSVIGIDEGQFFPDIVEFCERMA-NEGKIVIVAALDGTFQRKPFNNI 113
Query: 203 IDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR
Sbjct: 114 LNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCR 163
>gi|462449|sp|Q05880.1|KITH_CFEPV RecName: Full=Thymidine kinase
gi|221130|dbj|BAA01527.1| thymidine kinase [Choristoneura fumiferana entomopoxvirus 'L']
Length = 185
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI-VTHDGVKLPCCAL 138
I +I GPM++GKTT L+RRI +N +I + D R+ D+I + HDG K+
Sbjct: 3 IEIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRHDDDNILINHDGFKISHDDF 62
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ K +D+ ++IGIDE QFF+ DL FC A++ GK +IVAGL+ D+ +
Sbjct: 63 IKTNILINKIK--IFDKYEIIGIDECQFFDSNDLIIFCDTLANN-GKKIIVAGLNSDFNK 119
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F S+I +IP+++ +TKL + C FC A FT++K + IGGSD+Y+PVCR Y
Sbjct: 120 NPFKSIIKLIPISEKITKLQSICNFCYNDATFTMKKFNKDIIIEIGGSDLYIPVCRICYN 179
Query: 257 SGQVV 261
+
Sbjct: 180 ENNTI 184
>gi|9634756|ref|NP_039049.1| Thymidine kinase [Fowlpox virus]
gi|125432|sp|P10052.1|KITH_FOWPN RecName: Full=Thymidine kinase
gi|7271584|gb|AAF44430.1|AF198100_77 ORF FPV086 Thymidine kinase [Fowlpox virus]
gi|15011520|gb|AAK77606.1|AF396867_1 thymidine kinase [Fowlpox virus]
gi|61234|emb|CAA37041.1| unnamed protein product [Fowlpox virus]
gi|221413|dbj|BAA00233.1| thymidine kinase [Fowlpox virus]
gi|325381|gb|AAA43822.1| thymidine kinase [Fowlpox virus]
gi|3123532|emb|CAA11295.1| TK [Fowlpox virus]
gi|41023374|emb|CAE52628.1| thymidine kinase J2R homologue [Fowlpox virus isolate
HP-438/Munich]
Length = 183
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 106/186 (56%), Gaps = 7/186 (3%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI---VTHDGVK 132
SG IHVI GPMF+GKT+ L+RRI+ +IK D RY D I THD +
Sbjct: 2 SSGSIHVITGPMFSGKTSELVRRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLF 61
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ A + LS +D V VIGIDEAQFF D+ +F A+ GKTVIVA L+G
Sbjct: 62 MEATASSNLSVLVPTLLNDG---VQVIGIDEAQFFLDIVEFSESMANL-GKTVIVAALNG 117
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+ R FG+V ++ LA++V+ LTA C C A F+ R TE + IGG D Y+ VCR
Sbjct: 118 DFKRELFGNVYKLLSLAETVSSLTAICVKCYCDASFSKRVTENKEVMDIGGKDKYIAVCR 177
Query: 253 QHYVSG 258
+ + S
Sbjct: 178 KCFFSN 183
>gi|119609913|gb|EAW89507.1| thymidine kinase 1, soluble, isoform CRA_c [Homo sapiens]
Length = 207
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 107/179 (59%), Gaps = 16/179 (8%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG---VKLPCCALTTLSS 143
MF+GK+T L+RR++ VIK KDTRY S THD LP C L ++
Sbjct: 1 MFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDRNTMEALPACLLRDVA- 58
Query: 144 FRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVI 203
++ G V VIGIDE QFF D+ +FC EA + GKTVIVA LDG + R+ FG+++
Sbjct: 59 -QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVAALDGTFQRKPFGAIL 110
Query: 204 DIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY---VSGQ 259
+++PLA+SV KLTA C C + A +T R E + E+IGG+D Y VCR Y SGQ
Sbjct: 111 NLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYHSVCRLCYFKKASGQ 169
>gi|126290351|ref|XP_001368151.1| PREDICTED: thymidine kinase, cytosolic-like [Monodelphis domestica]
Length = 234
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 19/195 (9%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+ K+T L+ R+Q VIK KDTRY + THD
Sbjct: 12 SSPSKVRGQIQVILGPMFSRKSTELMHRVQRFQIAQYKCLVIKYTKDTRYS-KNFSTHDQ 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ +A V VIGIDE QFF D+ +F E + GKT+IV
Sbjct: 71 NTMEALPACLLWDVAQ-------NAL-AVTVIGIDEGQFFPDIVEF-SETMANAGKTIIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++ G++++++PL +S+ KL A C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKALGNILNLMPLTESMVKLIAVCMECFREAAYTKRLGMEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y VSGQ
Sbjct: 182 HSVCRLCYFKKVSGQ 196
>gi|145498198|ref|XP_001435087.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402216|emb|CAK67690.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 105/181 (58%), Gaps = 14/181 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPC 135
+G I VI GPMF+GKT+ L+R ++ T R AV+ D RY D I +HD L
Sbjct: 3 TGTISVIYGPMFSGKTSELMRLVKRFTISERKCAVLNYANDNRYSDDQCISSHDKQYLKA 62
Query: 136 CALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+T L DA+++ DV+ IDE QFF D+ +F EA + GK VIVA LDG
Sbjct: 63 IKVTKLF--------DAFEKCKDYDVVAIDEGQFFCDIVEF-SEAMANLGKIVIVAALDG 113
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVC 251
+ R+ F +++ +IPLA+ +TKLTA C FC K A FT R + + ELIGG D Y P C
Sbjct: 114 TFDRKPFRNILSLIPLAERITKLTAVCWFCKKENASFTKRTVQSQEIELIGGEDCYKPAC 173
Query: 252 R 252
R
Sbjct: 174 R 174
>gi|9964330|ref|NP_064798.1| thymidine kinase [Amsacta moorei entomopoxvirus 'L']
gi|125423|sp|P28852.1|KITH_AMEPV RecName: Full=Thymidine kinase
gi|9944539|gb|AAG02722.1|AF250284_16 AMV016 [Amsacta moorei entomopoxvirus 'L']
gi|221016|dbj|BAA01525.1| thymidine kinase [Amsacta moorei entomopoxvirus 'L']
gi|455125|gb|AAA42386.1| thymidine kinase [unidentified entomopoxvirus]
Length = 182
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL--PCCA 137
I +I+GPMF+GKTT L+R+I + +I N D R+ +I+ HDG L
Sbjct: 3 IELIIGPMFSGKTTELMRKINRYILSNQKCVIITHNIDNRFINKNIINHDGNILNKEYLY 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ T + + + D D+IGIDE QFFE DL FC + A+ + K VIVAGL+ D+
Sbjct: 63 IKTNNLINE---INIVDNYDIIGIDECQFFEENDLEQFCDKMAN-NKKKVIVAGLNCDFN 118
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R F S+ +IP + + KL A C+FC K A FT++K + + IGG D+Y+PVCR Y
Sbjct: 119 RNIFNSISKLIPKVEKIKKLQAICQFCYKDASFTIKKHNKNQIIEIGGQDLYVPVCRLCY 178
>gi|148912943|ref|YP_001293257.1| hypothetical protein GTPV_gp062 [Goatpox virus Pellor]
Length = 177
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R ++ V+K D RYG +S+ THD + +
Sbjct: 4 GYIHLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLNDIRYG-NSVYTHDNNHVSAMS 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L K + D+IGIDE QFF+D+ F A+ GK +I+A LD + R+
Sbjct: 63 TTLLYDVVDKIM-----KFDIIGIDEGQFFKDIVPFSENMANM-GKIIIIAALDSTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F ++ +IPL++ VTKL A C C K A F+ R T+E + ELIGG + Y VCR+ Y
Sbjct: 117 EFNDILKLIPLSEKVTKLNAVCMECYKDAAFSKRITKEKEIELIGGKEKYKSVCRKCY 174
>gi|55274605|gb|AAV49156.1| thymidine kinase [Goatpox virus]
gi|55274607|gb|AAV49157.1| thymidine kinase [Goatpox virus]
gi|62530406|gb|AAX85429.1| thymidine kinase [Goatpox virus]
gi|73427762|gb|AAZ76364.1| thymidine kinase [Goatpox virus]
Length = 177
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R ++ V+K D RYG +S+ THD + +
Sbjct: 4 GYIHLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLNDIRYG-NSVYTHDNNHVSAMS 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L K + D+IGIDE QFF+D+ F A+ GK +I+A LD + R+
Sbjct: 63 TTLLYDVVDKIMN-----FDIIGIDEGQFFKDIVPFSENMANM-GKIIIIAALDSTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F ++ +IPL++ VTKL A C C K A F+ R T+E + ELIGG + Y VCR+ Y
Sbjct: 117 EFNDILKLIPLSEKVTKLNAVCMECYKDAAFSKRITKEKEIELIGGKEKYKSVCRKCY 174
>gi|154412901|ref|XP_001579482.1| ThyB [Trichomonas vaginalis G3]
gi|121913689|gb|EAY18496.1| ThyB, putative [Trichomonas vaginalis G3]
Length = 348
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 104/181 (57%), Gaps = 12/181 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KLP 134
G I V+VGPMFAGKTT +LRRI R V+K +KD RY D + THD +P
Sbjct: 4 GRIEVVVGPMFAGKTTEMLRRIDRAELGRRRCVVMKYDKDQRYSTDKVSTHDQYMHDAIP 63
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
C L + F + AY+ IGIDE QFF D+ +F + A++ GKTVIVA LDG +
Sbjct: 64 CNEL--MPHFNECL---AYE---TIGIDEGQFFPDVVEFSEKLANY-GKTVIVAALDGTF 114
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
R+ FGSV++++ +S+TKLTA C G A F+ R ELIGG++ Y R
Sbjct: 115 QRKPFGSVLELMAKCESLTKLTAVCCKTGGEAAFSKRTVNSDSIELIGGAESYTAASRSA 174
Query: 255 Y 255
+
Sbjct: 175 F 175
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
++ SGEIH+ VGP+ +GKTT LLR + GR V I+ + +V H K
Sbjct: 178 TNTSGEIHLTVGPVKSGKTTELLRVLNRYVIAGRKVVCIRP--------EDVVDHHNPK- 228
Query: 134 PCCALTTLSSFRQKFGSDAYD-----QVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
F K D D DVIGIDEAQ F++L D+ E A+ GK V+V+
Sbjct: 229 ----------FEMKLVRDLPDIASLSNYDVIGIDEAQKFKNLADWADELAN-SGKIVMVS 277
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFT 229
+DGD ++ +I++ P + V KL + C G A F+
Sbjct: 278 AVDGDEQHHAYPGIIELFPRCEKVMKLDSVCPLTGLPAPFS 318
>gi|308800436|ref|XP_003074999.1| Putative thymidine kinase (ISS) [Ostreococcus tauri]
gi|116061552|emb|CAL52270.1| Putative thymidine kinase (ISS) [Ostreococcus tauri]
Length = 283
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 108/206 (52%), Gaps = 27/206 (13%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNV-AVIKSNKDTRYGL---DSIVTHDGVKL 133
GEIHVI GPMFAGKT+ L R++ G V A+ S + R+G S+VTHDG
Sbjct: 62 GEIHVITGPMFAGKTSALARKLATARSSGNAVFAITSSLEAERFGARAETSLVTHDGDAF 121
Query: 134 P-----CCALTTLSSFRQK------------FGSD---AYDQVDVIGIDEAQFFEDLYDF 173
C F + F S+ A ++ DV+ +DEAQF L DF
Sbjct: 122 TGDEEGVCNTIEGCDFGEARVRAIGTENGWTFASEDAKALERADVVAVDEAQFMPGLIDF 181
Query: 174 CREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKT 233
E A+ G+ V +AGLDGDY RR FG V+D+IP+ DSVT+L C CG+ + F+ R
Sbjct: 182 ALECAEKRGQIVYIAGLDGDYRRRRFGEVLDLIPMCDSVTRLRGTCAECGRASSFSRRVV 241
Query: 234 EETKTE---LIGGSDIYMPVCRQHYV 256
+ E +GGS+ Y P CR Y+
Sbjct: 242 DLGDGEDVVSVGGSEKYAPACRACYL 267
>gi|21492519|ref|NP_659638.1| Thymidine kinase [Sheeppox virus]
Length = 177
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R ++ V+K KD RYG +S+ THD + +
Sbjct: 4 GYIHLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLKDIRYG-NSVYTHDNNHISAIS 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L K + D+IGIDE QFF+D+ F A+ GK +I++ LD + R+
Sbjct: 63 TTLLYDVVDKIMN-----FDIIGIDEGQFFKDIVSFSENMANM-GKIIIISALDSTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F ++ +IPL++ VTKL A C C K A F+ R T+E + ELIG + Y VCR+ Y
Sbjct: 117 EFNDILKLIPLSEKVTKLNAVCMECYKDAAFSKRITKEKEIELIGSKEKYKSVCRKCY 174
>gi|340508335|gb|EGR34057.1| thymidine kinase, putative [Ichthyophthirius multifiliis]
Length = 198
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLD-SIVTHDGVKLPC- 135
G+I +I GPMF+GKT+ LLR ++ + + V+ KD RY SI THD + L
Sbjct: 9 GQIQLIYGPMFSGKTSELLRIVKRYSYAKKKCLVVNYIKDNRYTESTSICTHDKITLDNN 68
Query: 136 -CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
+ T + + + Y+ DVI IDE QFF+D+ + C A++ GK V+VA LD +
Sbjct: 69 NSYIQTQKCLKLQEIMEKYEMFDVIAIDEGQFFQDIDEKCDFFANN-GKIVLVAALDATF 127
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
R+ F ++++++ +++SVTKLTA C CG A FT RK + + ELIG S+IY PVCR
Sbjct: 128 QRKPFNNILNLVCISESVTKLTAVCVSCGGNASFTKRKIKCDQIELIGSSEIYEPVCRTC 187
Query: 255 YVSGQ 259
+ + +
Sbjct: 188 FYNNE 192
>gi|145501369|ref|XP_001436666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403808|emb|CAK69269.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 104/181 (57%), Gaps = 14/181 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPC 135
+G I VI GPMF+GKT+ L+R ++ T R V+ D RY D I +HD L
Sbjct: 3 TGTISVIYGPMFSGKTSELMRLVKRFTISERKCVVLNYANDNRYSDDQCISSHDKQYLKA 62
Query: 136 CALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+T L DA+++ DV+ IDE QFF D+ +F EA + GK VIVA LDG
Sbjct: 63 IKVTKLF--------DAFEKCKDHDVVAIDEGQFFCDIVEF-SEAMANLGKIVIVAALDG 113
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVC 251
+ R+ F +++ +IPLA+ +TKLTA C FC K A FT R + + ELIGG D Y P C
Sbjct: 114 TFDRKPFRNILSLIPLAERITKLTAVCWFCKKENASFTKRTVQSQEIELIGGEDCYKPAC 173
Query: 252 R 252
R
Sbjct: 174 R 174
>gi|145493834|ref|XP_001432912.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400027|emb|CAK65515.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 106/181 (58%), Gaps = 14/181 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-GLDSIVTHDGVKLPC 135
+G I VI GPMF+GKT+ L+R ++ T R V+ D RY G I +HD L
Sbjct: 3 TGTISVIYGPMFSGKTSELMRLVKRFTISERKCVVLNYANDNRYSGEQCISSHDKQFLRA 62
Query: 136 CALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ L+ +AY++ DV+ IDE QFF+D+ +F + A+ GK VIVA LDG
Sbjct: 63 IKVCKLN--------EAYEKCKESDVVAIDEGQFFQDIVEFSEKMANL-GKIVIVAALDG 113
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVC 251
+ R+ F +++++IPLA+ +TKLTA C FC + A FT R + + ELIGG D Y P C
Sbjct: 114 TFDRKPFHNILNLIPLAERITKLTAVCWFCKRENASFTKRIVQSKEIELIGGEDCYKPAC 173
Query: 252 R 252
R
Sbjct: 174 R 174
>gi|392900418|ref|NP_001255478.1| Protein THK-1, isoform b [Caenorhabditis elegans]
gi|332078251|emb|CCA65650.1| Protein THK-1, isoform b [Caenorhabditis elegans]
Length = 260
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI+GPMF+GKTT LLR + R ++K DTRY D + TH K+
Sbjct: 24 GSITVILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQG 81
Query: 138 LTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + + S + D+V V+ IDE QFFEDL + C E A GK V VA L+G + R
Sbjct: 82 RTVKAHRLSEVQSQIFNDEVQVVSIDEGQFFEDLAETCEELAQR-GKVVCVAALNGTFER 140
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F + ++P A+ + ++TA C CG +A F+ R T + K E+IGGSD Y +CR+ YV
Sbjct: 141 KPFPQISLLLPYANEIKQVTAVCVECGSQANFSFRSTLDKKVEVIGGSDTYTALCRECYV 200
>gi|392900416|ref|NP_001255477.1| Protein THK-1, isoform a [Caenorhabditis elegans]
gi|3880891|emb|CAA19501.1| Protein THK-1, isoform a [Caenorhabditis elegans]
gi|41021060|gb|AAR98639.1| thyymidine kinase (29.6 kD) (thk-1) [Caenorhabditis elegans]
Length = 269
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI+GPMF+GKTT LLR + R ++K DTRY D + TH K+
Sbjct: 33 GSITVILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQG 90
Query: 138 LTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + + S + D+V V+ IDE QFFEDL + C E A GK V VA L+G + R
Sbjct: 91 RTVKAHRLSEVQSQIFNDEVQVVSIDEGQFFEDLAETCEELAQR-GKVVCVAALNGTFER 149
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F + ++P A+ + ++TA C CG +A F+ R T + K E+IGGSD Y +CR+ YV
Sbjct: 150 KPFPQISLLLPYANEIKQVTAVCVECGSQANFSFRSTLDKKVEVIGGSDTYTALCRECYV 209
>gi|145477083|ref|XP_001424564.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391629|emb|CAK57166.1| unnamed protein product [Paramecium tetraurelia]
Length = 202
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 105/181 (58%), Gaps = 14/181 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPC 135
+G I VI GPMF+GKT+ L+R ++ T R V+ D RY + I +HD L
Sbjct: 3 TGTISVIYGPMFSGKTSELMRLVKRFTISERKCVVLNYANDNRYSEEQCISSHDKQFLKA 62
Query: 136 CALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ L+ +AY++ DV+ IDE QFF D+ +F + A+ GK VIVA LDG
Sbjct: 63 IKVCKLN--------EAYEKCKESDVVAIDEGQFFTDIVEFSEKMANL-GKIVIVAALDG 113
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVC 251
+ R+ F +++++IPLA+ +TKLTA C FC K A FT R + + ELIGG D Y P C
Sbjct: 114 TFDRKPFHNILNLIPLAERITKLTAVCWFCKKENASFTKRIVQSQEIELIGGEDCYKPAC 173
Query: 252 R 252
R
Sbjct: 174 R 174
>gi|118401188|ref|XP_001032915.1| thymidine kinase family protein [Tetrahymena thermophila]
gi|89287260|gb|EAR85252.1| thymidine kinase family protein [Tetrahymena thermophila SB210]
Length = 247
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCC 136
G I V GPMF+GK+T+LL I + + V V+ D RY ++ IVTH K
Sbjct: 9 GFISVYFGPMFSGKSTSLLNDILKYESEQKKVLVVGFAHDNRYSDEAEIVTHQHKKHHAV 68
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
L Q+ Y DVI IDE QFF D+ D C + A+ DGK VIVA LD + R
Sbjct: 69 KCFELKEIEQQ-----YKNYDVIAIDEGQFFLDIADKCDQYAN-DGKIVIVAALDATFQR 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
++F V+++IP+A+ V KL +C C + + F+ RK + ELIGG D+Y P+CR ++
Sbjct: 123 KAFNQVLNLIPVAEKVIKLRGKCSSCEEDSSFSSRKIKSNLIELIGGEDLYEPLCRSCFL 182
Query: 257 SGQ 259
+ Q
Sbjct: 183 AKQ 185
>gi|356980054|gb|AET43533.1| thymidine kinase [Micromonas pusilla virus PL1]
gi|357542172|gb|AET84932.1| thymidine kinase [Micromonas pusilla virus SP1]
Length = 176
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 102/177 (57%), Gaps = 6/177 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
+ +I+G MF+GKT+ L+RR++ G+ + V+ S KDTR + + THD VK C +
Sbjct: 3 LSIIMGNMFSGKTSELIRRLKRLKIIGKKILVVNSAKDTRSPDEVLKTHDNVKFDCFKVY 62
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
L K + ++ D+I IDEAQFF L F E K VI+AGLDGD + F
Sbjct: 63 ELFELINK---EEFNNADIIAIDEAQFFPRLKKFV-ECCMCVNKDVIIAGLDGDSFQNKF 118
Query: 200 GSVIDIIPLADSVTKLTARCEFC--GKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
G ++D IP+A VTKL+A C C G FT R + + ELIGGSD+Y+ CR H
Sbjct: 119 GELLDCIPIACEVTKLSALCMRCKDGTPGPFTKRIVKNQELELIGGSDMYIATCRNH 175
>gi|355568969|gb|EHH25250.1| hypothetical protein EGK_09036 [Macaca mulatta]
gi|355754420|gb|EHH58385.1| hypothetical protein EGM_08220 [Macaca fascicularis]
Length = 269
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 116/230 (50%), Gaps = 51/230 (22%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDAA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEE------------ 235
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E
Sbjct: 122 AALDGTFQRKPFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVAPPAFPAFS 181
Query: 236 -----------------------TKTELIGGSDIYMPVCRQHY---VSGQ 259
+ E+IGG+D Y VCR Y SGQ
Sbjct: 182 AGRRGGGVALPPSCPGPSPVLCPCQVEVIGGADKYHSVCRLCYFKKASGQ 231
>gi|324528577|gb|ADY48925.1| Thymidine kinase, cytosolic, partial [Ascaris suum]
Length = 183
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 99/174 (56%), Gaps = 14/174 (8%)
Query: 75 SPS-GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
SPS G I VI+GPMF+GKTT +LRR GR VIK DTRY + + THD +
Sbjct: 18 SPSRGRIEVILGPMFSGKTTEMLRRYNRHALAGRECRVIKYRGDTRYDANKVATHDQLMH 77
Query: 134 PCCALTTLSSFRQKFGSDAYDQV---DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
T + +D +D++ VI IDE QFF+D+ + C A+ GK VIVA L
Sbjct: 78 DGVIATHI--------ADIFDELLAYKVIAIDEGQFFQDIAECCERLANM-GKIVIVAAL 128
Query: 191 DGDYLRRSFGS-VIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGG 243
DGDY RR F S ++D+ PLA+ V KL A C CG A F+ R T E+IGG
Sbjct: 129 DGDYNRREFASKLLDLCPLAEKVCKLRAVCTECGSDASFSRRTTAHKNQEIIGG 182
>gi|257167814|gb|ACV49689.1| thymidine kinase [Vaccinia virus]
Length = 161
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 7/168 (4%)
Query: 84 VGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSS 143
+GPMF+GK+T L+RR++ IK + D RYG + THD T L
Sbjct: 1 IGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCD 59
Query: 144 FRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVI 203
+ + VIGIDE QFF D+ +FC A ++GK VIVA LDG + R+ F +++
Sbjct: 60 VLE-----SITDFSVIGIDEGQFFPDIVEFCERMA-NEGKIVIVAALDGTFQRKPFNNIL 113
Query: 204 DIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VC
Sbjct: 114 NLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVC 161
>gi|462448|sp|Q05879.1|KITH_CBEPV RecName: Full=Thymidine kinase
gi|221127|dbj|BAA01526.1| thymidine kinase [Choristoneura biennis entomopoxvirus 'L']
Length = 186
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 7/186 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS--IVTHDGVKLPCCA 137
I +I GPM++GKTT L+RRI +N +I + D R D ++ HDG K+
Sbjct: 3 IEIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRCEEDDNILINHDGFKISHDD 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ K +D+ ++IGIDE QFF+ DL FC A++ GK +IVAGL+ D+
Sbjct: 63 FIKTNILINKIK--IFDKYEIIGIDECQFFDSNDLMIFCDTLANN-GKKIIVAGLNSDFN 119
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ F S+I +IP+++ +TKL + C FC A FT++K + IGGSD+Y+PVCR Y
Sbjct: 120 KNPFKSIIKLIPISEKITKLQSICNFCYNDATFTMKKFNKDIIIEIGGSDLYIPVCRICY 179
Query: 256 VSGQVV 261
+
Sbjct: 180 NENNTI 185
>gi|390345617|ref|XP_784788.3| PREDICTED: thymidine kinase, cytosolic-like [Strongylocentrotus
purpuratus]
Length = 232
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 96/164 (58%), Gaps = 6/164 (3%)
Query: 93 TTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDA 152
T L+RRI+ ++K +KDTRY D + THD + + LSS ++
Sbjct: 31 TELIRRIKRYQIANHYCLLVKYDKDTRYDKDGVATHDMQVCKATSTSDLSSI-----AEL 85
Query: 153 YDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSV 212
++ +VIGIDE QFF D FC E A+ GK +IVA LDG Y R+ FG +++++P+A+SV
Sbjct: 86 AEEYEVIGIDEGQFFPDCVKFCEEMANQ-GKVIIVAALDGTYQRKGFGDILNLVPIAESV 144
Query: 213 TKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
KL A C C A +T R ET E+IGG+D YM VCR Y+
Sbjct: 145 IKLNAVCMHCYNEASYTRRIGCETAVEIIGGADKYMAVCRDCYL 188
>gi|422933824|ref|YP_007003876.1| thymidine kinase [Cyprinid herpesvirus 2]
gi|386686137|gb|AFJ20489.1| thymidine kinase [Cyprinid herpesvirus 2]
Length = 214
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 100/175 (57%), Gaps = 7/175 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-GLDSIVTHDGVKLPCCAL 138
+ +++GPMF+GK+T R + T G A IK + D RY D + TH G K P
Sbjct: 4 LELVLGPMFSGKSTECCRLLSRMTFTGGRCAAIKYSADNRYTDEDVVATHSGAKYPALVA 63
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
T L S D DVIGIDE QFFEDL D D + K VIV LDGD+L++
Sbjct: 64 THLESLMPVLLRD----YDVIGIDEGQFFEDLVDCVHTLLDAE-KYVIVGALDGDFLQQP 118
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
F +V+ +IP+A+ VTKLTA C C R A FT+R T+ T+ IGG++ Y VCR
Sbjct: 119 FWNVLQLIPVANKVTKLTAVCMMCTNRDAPFTVRITDSTEIVQIGGAESYRAVCR 173
>gi|303274903|ref|XP_003056762.1| thymidine kinase [Micromonas pusilla CCMP1545]
gi|226461114|gb|EEH58407.1| thymidine kinase [Micromonas pusilla CCMP1545]
Length = 472
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 106/193 (54%), Gaps = 31/193 (16%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY------------GLDSI---- 125
+ GPMF+GK+T L RRI+ R+ V+K KDTRY G+D +
Sbjct: 107 ITTGPMFSGKSTELARRIRRHKVANRSCLVVKYAKDTRYESEPGTAEAGTDGVDDLRGCM 166
Query: 126 VTHDG---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDG 182
+THD V P L + + F DVIG+DE QFF D+ FC + A+ +G
Sbjct: 167 ITHDRQALVAYPTHLLADVDNVAHSF--------DVIGVDEGQFFPDVVAFCEKWAN-EG 217
Query: 183 KTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTEL 240
KTVIVA LDGD+ R FG+V+ ++P+A+ VTKL+A C CG A FT R + EL
Sbjct: 218 KTVIVAALDGDFKRTPFGAVLGLVPIAEDVTKLSAVCHGCGGDAAFTARAGAVATDEVEL 277
Query: 241 IGGSDI-YMPVCR 252
IGGSD+ Y CR
Sbjct: 278 IGGSDLGYSASCR 290
>gi|384249603|gb|EIE23084.1| TK-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 8/181 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLD-SIVTHDGVKLPCC 136
G+I +I+GPMFAGKT+ L+RR + Q + ++ D R G D S+VTHD +
Sbjct: 23 GQIQLILGPMFAGKTSELIRRTRRFGQY-KKCLLVAYKGDNRCGSDASVVTHDQTGMKAK 81
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ LS +A +VIG+DE QFF D+ ++ A+ +GK VI+A LDG + R
Sbjct: 82 SVEKLSQVE-----NAAHCYNVIGVDEGQFFPDVVEYAERWAN-EGKIVIIAALDGTFQR 135
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F S++++IPLA+ V KL A C C + A FT R E + E++GG++ Y+ CR Y
Sbjct: 136 QPFNSILELIPLAEEVLKLRAVCSGCHREAAFTHRLGNEQEVEVVGGAENYVASCRACYH 195
Query: 257 S 257
S
Sbjct: 196 S 196
>gi|268552841|ref|XP_002634403.1| C. briggsae CBR-THK-1 protein [Caenorhabditis briggsae]
Length = 262
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI+GPMF+GKTT LLR + R ++K DTRY D + TH K+
Sbjct: 24 GSITVILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQG 81
Query: 138 LTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + + S + D V V+ IDE QFFEDL + C E A GK V VA L+G + R
Sbjct: 82 RTVKAHRLAEVASQIFSDDVQVVSIDEGQFFEDLAETCEELAQR-GKVVCVAALNGTFER 140
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F + ++P A+ + ++TA C CG +A F+ R T + K E+IGGS+ Y +CR+ YV
Sbjct: 141 KPFPQISLLLPYANEIKQVTAVCVECGAQANFSFRSTLDKKVEVIGGSESYTALCRECYV 200
>gi|281205299|gb|EFA79491.1| thymidine kinase [Polysphondylium pallidum PN500]
Length = 201
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 22/190 (11%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG---LDSIVTHDG---V 131
G I VI GPMF+GKTT L+RRI+ + +IK +KD RY D + THD
Sbjct: 9 GRIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDIRYNGAETDILYTHDKQNYT 68
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQF------FEDLYDFCREAADHDGKTV 185
LPC L + ++ DVIG+DE QF F D+ F + A+ +GKTV
Sbjct: 69 ALPCSRLEEVKQQALEY--------DVIGVDEGQFINVILKFPDIVSFSEDLAN-NGKTV 119
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVA LDG + R+SF + ++++P A+ +TKL+A C C + A F+ R + ELIGG+D
Sbjct: 120 IVAALDGTFQRKSFPA-LELVPKAEEITKLSAICMVCYRDAPFSKRIVPNEEIELIGGAD 178
Query: 246 IYMPVCRQHY 255
+Y+ VCR+ Y
Sbjct: 179 MYISVCRECY 188
>gi|149054918|gb|EDM06735.1| rCG32815, isoform CRA_a [Rattus norvegicus]
Length = 241
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 97/154 (62%), Gaps = 16/154 (10%)
Query: 75 SPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
SPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRN 71
Query: 132 ---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
LP C L ++ ++ G V VIGIDE QFF D+ DFC A+ GKTVIVA
Sbjct: 72 TMDALPACMLKDVA--QEALG------VAVIGIDEGQFFPDIVDFCETMAN-TGKTVIVA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFC 222
LDG + R++FGS+++++PLA+SV KLTA C C
Sbjct: 123 ALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
>gi|341903201|gb|EGT59136.1| hypothetical protein CAEBREN_26149 [Caenorhabditis brenneri]
gi|341903933|gb|EGT59868.1| CBN-THK-1 protein [Caenorhabditis brenneri]
Length = 262
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI+GPMF+GKTT LLR + R ++K DTRY D + TH K+
Sbjct: 24 GSITVILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQG 81
Query: 138 LTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + + S + D V V+ IDE QFFEDL + C E A GK V VA L+G + R
Sbjct: 82 RTVKAHRLAEVSSQIFCDDVQVVSIDEGQFFEDLAETCEELAQR-GKVVCVAALNGTFER 140
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F + ++P A+ + ++TA C CG +A F+ R T + K E+IGGS+ Y +CR+ YV
Sbjct: 141 KPFPQISLLLPYANEIKQVTAVCVECGAQANFSFRSTLDKKVEVIGGSESYTALCRECYV 200
>gi|308492862|ref|XP_003108621.1| CRE-THK-1 protein [Caenorhabditis remanei]
gi|308248361|gb|EFO92313.1| CRE-THK-1 protein [Caenorhabditis remanei]
Length = 269
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI+GPMF+GKTT LLR + R ++K DTRY D + TH K+
Sbjct: 33 GSITVILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQG 90
Query: 138 LTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + + S + D V V+ IDE QFF+DL + C E A GK V VA L+G + R
Sbjct: 91 RTVKAHRLDEVSSQIFSDDVQVVSIDEGQFFDDLAETCEELAQR-GKVVCVAALNGTFER 149
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F + ++P A+ + ++TA C CG +A F+ R T + K E+IGG+D Y +CR+ YV
Sbjct: 150 KPFPQISLLLPYANEIKQVTAVCVECGSQANFSFRSTLDKKVEVIGGADTYTALCRECYV 209
>gi|194216594|ref|XP_001491131.2| PREDICTED: thymidine kinase, cytosolic-like [Equus caballus]
Length = 210
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 103/172 (59%), Gaps = 13/172 (7%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG---VKLPCCALTTLSS 143
MF+GK+T L+RR++ VIK KDTRY + THD LP C L +
Sbjct: 1 MFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SNFSTHDRNTMEALPACQLRDAA- 58
Query: 144 FRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVI 203
++ G V VIGIDE QFF D+ +F EA + GKTVIVA LDG + R++FG+++
Sbjct: 59 -QEALG------VAVIGIDEGQFFPDIVEF-SEAMANAGKTVIVAALDGTFQRKAFGAIL 110
Query: 204 DIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+++PLA+SV KLTA C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 111 NLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYHSVCRLCY 162
>gi|326930815|ref|XP_003211536.1| PREDICTED: thymidine kinase, cytosolic-like [Meleagris gallopavo]
Length = 193
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 100/167 (59%), Gaps = 12/167 (7%)
Query: 92 TTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---PCCALTTLSSFRQKF 148
TT L+RR++ ++K KDTRY + THD + P CAL + +++
Sbjct: 2 TTELMRRVRRFQLAQYQCLLVKYAKDTRYCTTGVSTHDRNTMEARPACALKDV--YQEAL 59
Query: 149 GSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPL 208
GS VIGIDE QFF D+ +FC + A+ GKTVIVA LDG + R++FGS+++++PL
Sbjct: 60 GSA------VIGIDEGQFFPDIVEFCEKMANA-GKTVIVAALDGTFQRKAFGSILNLVPL 112
Query: 209 ADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
A+SV KL A C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 113 AESVVKLNAVCMECYREASYTKRLGAEREVEVIGGADKYHSVCRACY 159
>gi|403340224|gb|EJY69387.1| Thymidine kinase [Oxytricha trifallax]
Length = 284
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 113/238 (47%), Gaps = 51/238 (21%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL-DSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+R I+ + +I D RY + + THD +++
Sbjct: 10 GRIELILGPMFSGKSTELVRIIKRHRIANKKCLIINHQLDDRYSAPNYVATHDRIQMEAM 69
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ T+L + Y+ DVIGIDE QFF+D C A GK VIVA LDG + R
Sbjct: 70 SCTSL--IKDVIDRKVYEDYDVIGIDEGQFFQDAVQGCETLAQL-GKVVIVASLDGTFQR 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE---------------------- 234
+ FG ++++IPLA+ V KL+A C+ C A FTLR T+
Sbjct: 127 KPFGCLLNLIPLAEKVRKLSAICKECSDNASFTLRLTKNDQSLSLPMNCDECSRAVNSQQ 186
Query: 235 ------------------------ETKTELIGGSDIYMPVCRQ-HYVSGQVVVEAARI 267
E K ELIGG ++Y PVCRQ +Y G EA I
Sbjct: 187 QLAQNLTNDEKANKQQQQKLPIQQEEKIELIGGEELYKPVCRQCYYKHGGYHYEAGII 244
>gi|301766016|ref|XP_002918437.1| PREDICTED: LOW QUALITY PROTEIN: thymidine kinase, cytosolic-like,
partial [Ailuropoda melanoleuca]
Length = 249
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 27 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFSTHDR 85
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +F E + GKTVIV
Sbjct: 86 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEF-SETMANAGKTVIV 136
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + + Y
Sbjct: 137 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGSEKEV-----APTY 191
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 192 HSVCRLCY 199
>gi|123975356|ref|XP_001314157.1| thymidine kinase family protein [Trichomonas vaginalis G3]
gi|121896311|gb|EAY01466.1| thymidine kinase family protein [Trichomonas vaginalis G3]
Length = 346
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 97/178 (54%), Gaps = 6/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I GPMFAGKTT +LRRI + V K + D RY D + THD +
Sbjct: 5 GRIELIFGPMFAGKTTEMLRRISRCEMAHKRCRVYKYSFDQRYSADKVSTHDYFMHDAIS 64
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
TTL + S DVIGIDE QFF D+ F + A+ GK V ++ LDGDYLR+
Sbjct: 65 CTTLMPHFMEAMS-----YDVIGIDEGQFFPDIVVFADQLANA-GKIVFISALDGDYLRK 118
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG V ++I +SV KLTA C G+ A FT R + + ELIGG++ Y R +
Sbjct: 119 PFGKVGELISKCESVIKLTAICRVTGEEAAFTERTVKSDQLELIGGAESYTSSSRTAW 176
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 30/162 (18%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTH--DGVKLP 134
SG I++ +GP+ +GKTT L R + G+ V ++ V H D K+P
Sbjct: 182 SGCINLTIGPVKSGKTTELTRLLVRHKIAGKKVIML-------------VNHEVDTTKVP 228
Query: 135 C-----CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
AL L+S ++ DVIG+D+ +E + ++ + ADH+ K V+VA
Sbjct: 229 VEVRVINALPDLASMQE---------YDVIGVDDGHLYEGIAEWADDFADHN-KKVMVAA 278
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR 231
DGD R + ++ + A+SV K+ + C G A FT R
Sbjct: 279 ADGDEFRNPYSHILKLFSFAESVRKIDSICMVTGNPAPFTAR 320
>gi|403367875|gb|EJY83764.1| Thymidine kinase [Oxytricha trifallax]
Length = 212
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 11/187 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI------VTHDGV 131
G I +I+GPMF+GK++ L RR+ + R+ + K KD R ++ T
Sbjct: 22 GRIELILGPMFSGKSSELFRRVLRHSIAQRSCILAKYQKDQRQLEETFKTAQIQTTKTNE 81
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
L ++ LS ++ S+ VIGIDE QF+ DL+D C E D K VI++ LD
Sbjct: 82 YLNIMPISKLSDLNEQNVSET----KVIGIDEGQFYPDLFDMCSELVLKD-KIVIISALD 136
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
GD+ R+ FG + +IP+ D + KL A C+ CG A FT R + EL+G D+Y P+C
Sbjct: 137 GDFERKPFGQIPQLIPMCDEIIKLNAICQRCGDEAPFTHRLVTSKEVELVGWKDVYEPLC 196
Query: 252 RQHYVSG 258
R Y S
Sbjct: 197 RHCYDSA 203
>gi|301121262|ref|XP_002908358.1| thymidine kinase [Phytophthora infestans T30-4]
gi|262103389|gb|EEY61441.1| thymidine kinase [Phytophthora infestans T30-4]
Length = 174
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 99/167 (59%), Gaps = 12/167 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KL 133
G + +I+GPMF+GK+T L+RRI + V+K DTR+ + + THD V +
Sbjct: 6 EGSLQLIIGPMFSGKSTELIRRIHRYQHAKLDCLVVKYLFDTRHSEEMLSTHDKVFVEAM 65
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P AL + F +++ DVIGIDE QF+ DL +FC+EAA+ GK V+VA LD
Sbjct: 66 PVQALAEVRPFLKEY--------DVIGIDEGQFYPDLVEFCQEAANL-GKVVVVAALDAT 116
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL 240
+ R++F +VI++IP A+ V KL A C CG+ A FT R + E+
Sbjct: 117 FERKAFDNVIELIPTAEKVIKLNAICSSCGQDAAFTRRLVADKTLEV 163
>gi|340507228|gb|EGR33225.1| thymidine kinase, putative [Ichthyophthirius multifiliis]
Length = 195
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 7/176 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCC 136
G I VI GPMF+GK++ LL I+ K + V D RY + I TH+G
Sbjct: 13 GSITVIFGPMFSGKSSKLLEYIKRYQYKQQRCLVFNYVNDNRYSQEEQITTHNGQSFKAQ 72
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ LS + DVI IDE QFF D+ D + A+ GK VIVA LD + R
Sbjct: 73 KISNLSDVL-----NISKNYDVIAIDEGQFFLDIADIADQLANQ-GKIVIVAALDASFQR 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
++F +++D++P+ + + KL A C C + A ++ RK + E+IGG ++Y PVCR
Sbjct: 127 KAFNNILDLVPICEEIIKLKAVCLICKEDASYSKRKGSSKRVEMIGGEELYFPVCR 182
>gi|260817475|ref|XP_002603612.1| hypothetical protein BRAFLDRAFT_126922 [Branchiostoma floridae]
gi|229288932|gb|EEN59623.1| hypothetical protein BRAFLDRAFT_126922 [Branchiostoma floridae]
Length = 196
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 80 IHVIVGPMFAGKT-TTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
+ ++ P G++ T L+RRIQ ++ +IK D RY D I THD A
Sbjct: 18 VDLVTKPPRKGRSRTELVRRIQRYKIAKQSCVLIKYAGDDRYDKDGIATHDRYVTEAVAT 77
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
T L + S VIG+DE QFF D+ FC E A+ GKTVIVA LDG + ++
Sbjct: 78 TKLYDIKDDVLS-----CQVIGVDEGQFFPDVVPFCDEMANQ-GKTVIVAALDGTFQKKG 131
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FG +++++PLA+SV KL A C C A +T R +ETK E+IGG + YM VCR
Sbjct: 132 FGDILNLVPLAESVIKLQAVCMSCYNHASYTKRLGQETKVEVIGGCEKYMAVCR 185
>gi|242023692|ref|XP_002432265.1| Thymidine kinase, cytosolic, putative [Pediculus humanus corporis]
gi|212517674|gb|EEB19527.1| Thymidine kinase, cytosolic, putative [Pediculus humanus corporis]
Length = 198
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 91/178 (51%), Gaps = 22/178 (12%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GKTT L+RRI+ V K D RY + + THD +
Sbjct: 18 GRIEVIFGPMFSGKTTELIRRIRRYQLARFKCLVFKYAGDNRYSKNDVATHDCNTFAAIS 77
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L E QFF DL F E+ + GK VI+A LDG Y R
Sbjct: 78 CTLL---------------------EGQFFSDLIPF-SESLANVGKIVIIAALDGTYQRT 115
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+FG ++ ++PL++++ KL A C C A FT R T E ELIGG+D YM VCR+ Y
Sbjct: 116 AFGDILKLVPLSENIIKLNAICMVCYNTAGFTKRITNEKAVELIGGTDKYMAVCRECY 173
>gi|332880834|ref|ZP_08448505.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357046990|ref|ZP_09108604.1| thymidine kinase [Paraprevotella clara YIT 11840]
gi|332681217|gb|EGJ54143.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355530085|gb|EHG99503.1| thymidine kinase [Paraprevotella clara YIT 11840]
Length = 229
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 111/210 (52%), Gaps = 17/210 (8%)
Query: 57 PPLFSLQNRNLHSEASVSSP----------SGEIHVIVGPMFAGKTTTLLRRIQAETQKG 106
PPL + N + + SP G I VI G MF+GKT L+RR++
Sbjct: 13 PPLILIFAENYNQKHPHMSPITERNGEMMRRGRIEVICGSMFSGKTEELIRRLKRAEFAR 72
Query: 107 RNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQF 166
++V + K + DTRY +V+H+G +P + + +S GSD DV+GIDEAQF
Sbjct: 73 QSVEIFKPSIDTRYAEQDVVSHEGNSIPSTPVDSSASILL-LGSDT----DVVGIDEAQF 127
Query: 167 F-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKR 225
F E+L D C E A+ G VIVAGLD D+ FG + + +AD VTK+ A C CG
Sbjct: 128 FDENLIDVCNELANR-GTRVIVAGLDLDFKGVPFGPMPGLCAVADEVTKVHAICVRCGAL 186
Query: 226 AFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
A+ + R ++ K L+G Y P+CR Y
Sbjct: 187 AYVSHRTVDDEKRVLLGEQTAYEPLCRACY 216
>gi|345304443|ref|YP_004826345.1| thymidine kinase [Rhodothermus marinus SG0.5JP17-172]
gi|345113676|gb|AEN74508.1| Thymidine kinase [Rhodothermus marinus SG0.5JP17-172]
Length = 271
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Query: 44 RNPKFIHSMVSPRPPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAET 103
R ++ V P L ++ L SV G I VI G MF+GKT L+RR++
Sbjct: 43 RGEAYLTGAVQPADELMPMEPLILRHGGSV----GWIEVICGSMFSGKTEELIRRLRRAQ 98
Query: 104 QKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDE 163
+ V V K D RY +V+HD L + + GS DV+GIDE
Sbjct: 99 IARQRVEVFKPRMDRRYSETDVVSHDENALRSTPVDSAEQILLLAGS-----ADVVGIDE 153
Query: 164 AQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFC 222
AQFF+ L D C++ A+ DGK VIVAGLD DY+ R F + ++ +A+ VTKL A C C
Sbjct: 154 AQFFDMTLVDVCQQLAN-DGKRVIVAGLDQDYMGRPFEPMPQLMAVAEYVTKLHAICAVC 212
Query: 223 GKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
G A + R T+E ++G +D Y P CR+
Sbjct: 213 GAPANHSQRLTDEEGRVVLGAADRYEPRCRR 243
>gi|225711222|gb|ACO11457.1| Thymidine kinase [Caligus rogercresseyi]
Length = 185
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 7/188 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I +I+GPMF+GK+T L+RR++ ++K +KD RY + I THD + +
Sbjct: 4 GQIQLIIGPMFSGKSTELIRRLRRLLCAKFKCLIVKYSKDDRYDENGIATHDRTTMDAVS 63
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T S +K + VIGIDE QFF D+ F A + K VI+A LD + R+
Sbjct: 64 CLTPESLAEK-----AEDFHVIGIDEGQFFPDIVPFAERMASQN-KIVIIAALDSTFQRK 117
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ-HYV 256
F ++++IPLA+ VTK + C C K F R T+E + E+IGGS+ Y+ VCR +YV
Sbjct: 118 GFPHILELIPLAERVTKFNSVCMKCFKEGSFNKRITQEMELEVIGGSESYVSVCRSCYYV 177
Query: 257 SGQVVVEA 264
VV+ +
Sbjct: 178 DNNVVLSS 185
>gi|156342067|ref|XP_001620868.1| hypothetical protein NEMVEDRAFT_v1g2938 [Nematostella vectensis]
gi|156206273|gb|EDO28768.1| predicted protein [Nematostella vectensis]
Length = 155
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 6/152 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
+ VI GPMF+GKTT LLRRI+ +IK KD RY + + THD L T
Sbjct: 1 LQVIFGPMFSGKTTELLRRIKRYQVANHKCLLIKYAKDIRYDEEGVATHDRQILRATPCT 60
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
L + K + + VIGIDE QFF D+ +F E A +GKT+I+A LDG + R++F
Sbjct: 61 VLEDLKNKAINHS-----VIGIDEGQFFPDIVEFSEEMAS-EGKTIIIAALDGTFQRKAF 114
Query: 200 GSVIDIIPLADSVTKLTARCEFCGKRAFFTLR 231
G+++ ++PLA+SV KL+A C C K A FT R
Sbjct: 115 GNILHLVPLAESVVKLSAVCMNCFKDASFTKR 146
>gi|373457025|ref|ZP_09548792.1| Thymidine kinase [Caldithrix abyssi DSM 13497]
gi|371718689|gb|EHO40460.1| Thymidine kinase [Caldithrix abyssi DSM 13497]
Length = 193
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V +G I VI G MF+GKT L+RR++ + VA+ K DTRY IV+HD K
Sbjct: 5 VHRHTGWIEVICGSMFSGKTEELIRRLKRAMIARQKVAIFKPKVDTRYSTTEIVSHDKQK 64
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLD 191
+ + + +K + V+GIDEAQFF+D L + C++ A+ GK VI+AGLD
Sbjct: 65 IKSIVVESPQEILEKAL-----EAQVVGIDEAQFFDDSLVNICQKLANM-GKRVIIAGLD 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
DYL + F + ++ +A+ +TK A C CG A T RKT++ ++G S+IY C
Sbjct: 119 QDYLGKPFEPIPQLLAVAEYITKTHAICVVCGNPANHTYRKTKQKDKVIVGASNIYEARC 178
Query: 252 R 252
R
Sbjct: 179 R 179
>gi|411147447|ref|NP_001258658.1| thymidine kinase, cytosolic isoform 2 [Mus musculus]
gi|148702689|gb|EDL34636.1| mCG19309, isoform CRA_a [Mus musculus]
Length = 197
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 98/163 (60%), Gaps = 16/163 (9%)
Query: 96 LRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KLPCCALTTLSSFRQKFGSDA 152
+RR Q K VIK KDTRY +S THD LP C L ++ ++ G
Sbjct: 4 VRRFQIAQYK---CLVIKYAKDTRYS-NSFSTHDRNTMDALPACMLRDVT--QESLG--- 54
Query: 153 YDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSV 212
V VIGIDE QFF D+ DFC E ++GKTVIVA LDG + R++FGS+++++PLA+SV
Sbjct: 55 ---VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESV 110
Query: 213 TKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
KLTA C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 111 VKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKYHSVCRLCY 153
>gi|325300190|ref|YP_004260107.1| thymidine kinase [Bacteroides salanitronis DSM 18170]
gi|324319743|gb|ADY37634.1| Thymidine kinase [Bacteroides salanitronis DSM 18170]
Length = 201
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + + V + K DTRY +V+HD +P
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRASFARQRVEIFKPVLDTRYSESDVVSHDNNSIPSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ T +S ++DV+GIDEAQFF E L D C E A+H G VI+AGLD DY
Sbjct: 76 VDTSASILL-----LSSEIDVVGIDEAQFFDEGLTDVCNELANH-GVRVIIAGLDMDYKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + K L+G + Y P+CR+ Y
Sbjct: 130 VPFGPIPGLCAIADEVTKVHAICVKCGDLAYISHRTVADDKRVLLGEKEEYEPLCRRCY 188
>gi|345513352|ref|ZP_08792874.1| thymidine kinase [Bacteroides dorei 5_1_36/D4]
gi|345456266|gb|EEO47102.2| thymidine kinase [Bacteroides dorei 5_1_36/D4]
Length = 224
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 41 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTP 100
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F SD DV+GIDEAQFF E L D C + AD +G VIVAGLD D+ R
Sbjct: 101 IDSSASILL-FSSDK----DVVGIDEAQFFDEGLVDVCNQLAD-NGIRVIVAGLDMDFKR 154
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG A+ T R T+ K L+G Y P+CR Y+
Sbjct: 155 IPFGPIPALLAIADEVTKVHAICVKCGNLAYATHRITKSDKRVLLGEKADYEPLCRACYM 214
Query: 257 S 257
Sbjct: 215 E 215
>gi|237709237|ref|ZP_04539718.1| thymidine kinase [Bacteroides sp. 9_1_42FAA]
gi|265754914|ref|ZP_06089828.1| thymidine kinase [Bacteroides sp. 3_1_33FAA]
gi|229456622|gb|EEO62343.1| thymidine kinase [Bacteroides sp. 9_1_42FAA]
gi|263234525|gb|EEZ20104.1| thymidine kinase [Bacteroides sp. 3_1_33FAA]
Length = 199
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F SD DV+GIDEAQFF E L D C + AD+ G VIVAGLD D+ R
Sbjct: 76 IDSSASILL-FSSDK----DVVGIDEAQFFDEGLVDVCNQLADN-GIRVIVAGLDMDFKR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG A+ T R T+ K L+G Y P+CR Y+
Sbjct: 130 IPFGPIPALLAIADEVTKVHAICVKCGNLAYATHRITKSDKRVLLGEKADYEPLCRACYM 189
Query: 257 S 257
Sbjct: 190 E 190
>gi|423232549|ref|ZP_17218949.1| thymidine kinase [Bacteroides dorei CL02T00C15]
gi|423242037|ref|ZP_17223147.1| thymidine kinase [Bacteroides dorei CL03T12C01]
gi|423247238|ref|ZP_17228288.1| thymidine kinase [Bacteroides dorei CL02T12C06]
gi|392623986|gb|EIY18082.1| thymidine kinase [Bacteroides dorei CL02T00C15]
gi|392633102|gb|EIY27051.1| thymidine kinase [Bacteroides dorei CL02T12C06]
gi|392639781|gb|EIY33589.1| thymidine kinase [Bacteroides dorei CL03T12C01]
Length = 224
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 41 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTP 100
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F SD DV+GIDEAQFF E L D C + AD +G VIVAGLD D+ R
Sbjct: 101 IDSSASILL-FSSDK----DVVGIDEAQFFDEGLVDVCNQLAD-NGIRVIVAGLDMDFKR 154
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG A+ T R T+ K L+G Y P+CR Y+
Sbjct: 155 IPFGPIPALLAIADEVTKVHAICVKCGNLAYATHRITKSDKRVLLGEKADYEPLCRACYM 214
Query: 257 S 257
Sbjct: 215 E 215
>gi|212693715|ref|ZP_03301843.1| hypothetical protein BACDOR_03235 [Bacteroides dorei DSM 17855]
gi|212663736|gb|EEB24310.1| thymidine kinase [Bacteroides dorei DSM 17855]
Length = 199
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F SD DV+GIDEAQFF E L D C + AD+ G VIVAGLD D+ R
Sbjct: 76 IDSSASILL-FSSDK----DVVGIDEAQFFDEGLIDVCNQLADN-GIRVIVAGLDMDFKR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG A+ T R T+ K L+G Y P+CR Y+
Sbjct: 130 IPFGPIPALLAIADEVTKVHAICVKCGNLAYATHRITKSDKRVLLGEKADYEPLCRACYM 189
Query: 257 S 257
Sbjct: 190 E 190
>gi|229495530|ref|ZP_04389263.1| thymidine kinase [Porphyromonas endodontalis ATCC 35406]
gi|229317513|gb|EEN83413.1| thymidine kinase [Porphyromonas endodontalis ATCC 35406]
Length = 189
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 5/178 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ V V K D RY + +V+HD +
Sbjct: 10 GSIEVICGSMFSGKTEELMRRLRRAAIAKMKVEVYKPATDIRYDQEKVVSHDANAVESTP 69
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L + + SDA DV+GIDEAQFF++ + GK VI+AGLD D+ R
Sbjct: 70 LEN-AQMILLYASDA----DVVGIDEAQFFDEALVYVVSELADSGKRVIIAGLDMDFRRN 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ LADSVTK+ A C CG A ++ R + + +T L+G D Y P+CR+ Y
Sbjct: 125 PFGPMPQLMALADSVTKVHAVCMDCGLPANYSYRLSSDDRTVLLGELDEYRPLCRECY 182
>gi|149054920|gb|EDM06737.1| rCG32815, isoform CRA_c [Rattus norvegicus]
Length = 196
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 97/163 (59%), Gaps = 13/163 (7%)
Query: 96 LRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KLPCCALTTLSSFRQKFGSDA 152
+RR++ VIK KDTRY +S THD LP C L ++ ++ G
Sbjct: 1 MRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRNTMDALPACMLKDVA--QEALG--- 54
Query: 153 YDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSV 212
V VIGIDE QFF D+ DFC E + GKTVIVA LDG + R++FGS+++++PLA+SV
Sbjct: 55 ---VAVIGIDEGQFFPDIVDFC-ETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESV 110
Query: 213 TKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
KLTA C C + A +T R E + E+IGG+D Y VCR Y
Sbjct: 111 VKLTAVCMECFREASYTKRLGLEKEVEVIGGADKYHSVCRLCY 153
>gi|150004389|ref|YP_001299133.1| thymidine kinase [Bacteroides vulgatus ATCC 8482]
gi|294776784|ref|ZP_06742247.1| thymidine kinase [Bacteroides vulgatus PC510]
gi|319643362|ref|ZP_07997988.1| thymidine kinase [Bacteroides sp. 3_1_40A]
gi|166220761|sp|A6L1E7.1|KITH_BACV8 RecName: Full=Thymidine kinase
gi|149932813|gb|ABR39511.1| thymidine kinase [Bacteroides vulgatus ATCC 8482]
gi|294449260|gb|EFG17797.1| thymidine kinase [Bacteroides vulgatus PC510]
gi|317384991|gb|EFV65944.1| thymidine kinase [Bacteroides sp. 3_1_40A]
Length = 199
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F SD DV+GIDEAQFF E L D C + AD +G VIVAGLD D+ R
Sbjct: 76 IDSSASILL-FSSDK----DVVGIDEAQFFDEGLVDVCNKLAD-NGIRVIVAGLDMDFRR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG A+ T R T+ K L+G Y P+CR Y+
Sbjct: 130 VPFGPIPALLAIADEVTKVHAICVKCGNLAYATHRITKSEKRVLLGEKADYEPLCRTCYM 189
Query: 257 SG 258
Sbjct: 190 EA 191
>gi|325102795|ref|YP_004272449.1| thymidine kinase [Pedobacter saltans DSM 12145]
gi|324971643|gb|ADY50627.1| Thymidine kinase [Pedobacter saltans DSM 12145]
Length = 188
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR+ NV + K DTRY ++V+H+ +P
Sbjct: 9 GSIEVICGSMFSGKTEELIRRLTRAKIAKLNVEIFKPKTDTRYDESAVVSHNANAIPSIP 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S+ +GSD V+VIGIDEAQFF+D L D C + A+ G VIVAGLD D+
Sbjct: 69 VENSSAILL-YGSD----VEVIGIDEAQFFDDELPDVCVKLANK-GIRVIVAGLDMDFTG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++ +A+ VTK+ A C CG A ++LR L+G + Y P CR Y
Sbjct: 123 KPFGPIPALMAIAEDVTKVQAVCMKCGAPALYSLRLNSNPNKVLLGEKESYEPRCRVCY 181
>gi|330998170|ref|ZP_08321996.1| thymidine kinase [Paraprevotella xylaniphila YIT 11841]
gi|329568862|gb|EGG50660.1| thymidine kinase [Paraprevotella xylaniphila YIT 11841]
Length = 200
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ ++V + K + DTRY +V+H+G +P
Sbjct: 15 GRIEVICGSMFSGKTEELIRRLKRAEFARQSVEIFKPSIDTRYAEQDVVSHEGNSIPSTP 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S GSD DV+GIDEAQFF E+L D C E A+ G VIVAGLD D+
Sbjct: 75 VDSSASILL-LGSD----TDVVGIDEAQFFDENLIDVCNELANR-GTRVIVAGLDLDFKG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + K L+G Y P+CR Y
Sbjct: 129 IPFGPMPGLCAVADEVTKVHAICVRCGALAYVSHRTVDNEKRVLLGEQTAYEPLCRACY 187
>gi|298375344|ref|ZP_06985301.1| thymidine kinase [Bacteroides sp. 3_1_19]
gi|298267844|gb|EFI09500.1| thymidine kinase [Bacteroides sp. 3_1_19]
Length = 196
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY D++V+HD +P
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SS F S ++DV+GIDEAQFF E L + C + A +G VIVAGLD DY
Sbjct: 76 VDSSSSILL-FTS----EIDVVGIDEAQFFDEGLVNVCNQLA-ANGIRVIVAGLDMDYKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG+ A+ + R K +G Y P+CR+ Y
Sbjct: 130 VPFGPMPELCAIADEVTKVHAICVKCGRLAYVSHRIVRNDKRVFLGEQSEYEPLCRECYA 189
Query: 257 SGQ 259
+
Sbjct: 190 KAE 192
>gi|268318148|ref|YP_003291867.1| thymidine kinase [Rhodothermus marinus DSM 4252]
gi|262335682|gb|ACY49479.1| Thymidine kinase [Rhodothermus marinus DSM 4252]
Length = 213
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V V K D RY +V+HD L
Sbjct: 15 GWIEVICGSMFSGKTEELIRRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTP 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + GS DV+GIDEAQFF+ L D C++ A+ DGK VIVAGLD DY+
Sbjct: 75 VDSAEQILLLAGS-----ADVVGIDEAQFFDMTLVDVCQQLAN-DGKRVIVAGLDQDYMG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R F + ++ +A+ VTKL A C CG A + R T+E ++G +D Y P CR+ +
Sbjct: 129 RPFEPMPQLMAVAEYVTKLHAICAVCGAPANHSQRLTDEEGRVVLGAADRYEPRCRRCF 187
>gi|357060495|ref|ZP_09121263.1| thymidine kinase [Alloprevotella rava F0323]
gi|355375800|gb|EHG23068.1| thymidine kinase [Alloprevotella rava F0323]
Length = 197
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 101/176 (57%), Gaps = 7/176 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ +NV + K DTRY +++V+HD +
Sbjct: 13 GHIEVICGSMFSGKTEELIRRLKRAQFARQNVEIYKPTIDTRYSEENVVSHDSNYIKSMP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S SDA +V+GIDEAQFF E L D C++ AD GK VIVAGLD D+L
Sbjct: 73 VDAPESILL-LASDA----EVVGIDEAQFFDETLVDVCKKMAD-AGKRVIVAGLDMDFLG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FG + ++ +A+ VTK+ A C CG A F+ R + K ++G D Y P+CR
Sbjct: 127 TPFGPMPALMAIAEDVTKVHAICVRCGNLAQFSHRIVKGEKQVMLGEKDEYEPLCR 182
>gi|422933596|ref|YP_007003721.1| thymidine kinase [Cyprinid herpesvirus 1]
gi|386686002|gb|AFJ20355.1| thymidine kinase [Cyprinid herpesvirus 1]
Length = 181
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 96/175 (54%), Gaps = 8/175 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLD-SIVTHDGVKLPCCAL 138
+ +I+GPMFAGK+T + RR+ GR +K DTRY LD ++VTH+G K P
Sbjct: 3 LELILGPMFAGKSTEMCRRLTRLAISGRQCLAVKFFGDTRYTLDAAVVTHNGDKYPALVA 62
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
L + + D +GIDE QFF DLY+ + GK V+VA LDG Y +
Sbjct: 63 CKLGDIFEDL-----IKADAVGIDEGQFFPDLYEVVHKLLAL-GKIVLVAALDGTYKQTP 116
Query: 199 FGSVIDIIPLADSVTKLTARCEFC-GKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
F V+ +IP +SV KLTA C C K A FT+R + LIGG++ Y VCR
Sbjct: 117 FEDVLKLIPHCESVVKLTAVCLICRDKEAPFTIRTSSGKDLVLIGGTEAYKSVCR 171
>gi|351698088|gb|EHB01007.1| Thymidine kinase, cytosolic [Heterocephalus glaber]
Length = 240
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 99/177 (55%), Gaps = 13/177 (7%)
Query: 92 TTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG---VKLPCCALTTLSSFRQKF 148
+T L+RR++ VIK KDTRY THD LP C L + ++
Sbjct: 41 STELMRRVRRFQIAQYKCLVIKYAKDTRYS-SGFSTHDRNTMEALPACLLRDTA--QEAL 97
Query: 149 GSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPL 208
G+ VIGIDE QFF D+ +FC E + GKTVIVA LDG + R++FGS+++++PL
Sbjct: 98 GAA------VIGIDEGQFFPDIVEFC-EGMANAGKTVIVAALDGTFQRKAFGSILNLVPL 150
Query: 209 ADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQVVVEAA 265
A+SV KLTA C C + A +T R E + E+IGG+D Y VCR Y V A
Sbjct: 151 AESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKYHSVCRLCYFKKSSVQNAG 207
>gi|256839647|ref|ZP_05545156.1| thymidine kinase [Parabacteroides sp. D13]
gi|256738577|gb|EEU51902.1| thymidine kinase [Parabacteroides sp. D13]
Length = 197
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY D++V+HD +P
Sbjct: 17 GRIEVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTP 76
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SS F S ++DV+GIDEAQFF E L + C + A +G VIVAGLD DY
Sbjct: 77 VDSSSSILL-FTS----EIDVVGIDEAQFFDEGLVNVCNQLA-ANGIRVIVAGLDMDYKG 130
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG+ A+ + R K +G Y P+CR+ Y
Sbjct: 131 VPFGPMPELCAIADEVTKVHAICVKCGRLAYVSHRIVGNDKRVFLGEQSEYEPLCRECYA 190
Query: 257 SGQ 259
+
Sbjct: 191 KAE 193
>gi|256420562|ref|YP_003121215.1| thymidine kinase [Chitinophaga pinensis DSM 2588]
gi|256035470|gb|ACU59014.1| Thymidine kinase [Chitinophaga pinensis DSM 2588]
Length = 190
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 106/182 (58%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ V + K DTRY + IV+HD ++
Sbjct: 13 GWIEVICGSMFSGKTEELIRRLKRARIANLKVEIFKPMIDTRYDVQHIVSHDESRIIS-- 70
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + +Q +VDV+GIDEAQFF+ +L + C + A G VIVAGLD D+L
Sbjct: 71 -TPLENSQQILL--LAQEVDVVGIDEAQFFDGELPEVCDQLALR-GIRVIVAGLDMDFLG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + ++ AD +TKL A C CG A ++ RK++++ T L+G +D+Y P CR Y
Sbjct: 127 KPFGQMPFLLAKADYITKLHAICVKCGNIANYSYRKSKDSHTVLLGETDLYEPRCRHCYY 186
Query: 257 SG 258
G
Sbjct: 187 EG 188
>gi|410101754|ref|ZP_11296682.1| thymidine kinase [Parabacteroides sp. D25]
gi|409239552|gb|EKN32336.1| thymidine kinase [Parabacteroides sp. D25]
Length = 196
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY D++V+HD +P
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SS F S ++DV+GIDEAQFF E L + C + A +G VIVAGLD DY
Sbjct: 76 VDSSSSILL-FTS----EIDVVGIDEAQFFDEGLVNVCNQLA-ANGIRVIVAGLDMDYKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG+ A+ + R K +G Y P+CR+ Y
Sbjct: 130 VPFGPMPELCAIADEVTKVHAICVKCGRLAYVSHRIVGNDKRVFLGEQSEYEPLCRECYA 189
Query: 257 SGQ 259
+
Sbjct: 190 KAE 192
>gi|375148232|ref|YP_005010673.1| thymidine kinase [Niastella koreensis GR20-10]
gi|361062278|gb|AEW01270.1| Thymidine kinase [Niastella koreensis GR20-10]
Length = 193
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ V + K D RY + +IV+HD +
Sbjct: 13 GSIEVICGSMFSGKTEELIRRLKRAKIANLRVEIFKPKIDVRYDVHNIVSHDENAILSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +++ DVIGIDEAQFF+D L D C + A G VIVAGLD DY
Sbjct: 73 IDNSQTILL-----LHNEADVIGIDEAQFFDDQLPDVCDQLALR-GHRVIVAGLDMDYTG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + ++ AD +TKL A C CG A ++ RK + L+G D+Y P CR+ Y
Sbjct: 127 KPFGQIPFLLSKADYITKLHAICVKCGHIANYSFRKKADKTQVLLGEKDVYEPRCRKCYY 186
Query: 257 SGQV 260
G V
Sbjct: 187 EGAV 190
>gi|379731892|ref|YP_005324088.1| thymidine kinase [Saprospira grandis str. Lewin]
gi|378577503|gb|AFC26504.1| thymidine kinase [Saprospira grandis str. Lewin]
Length = 184
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 101/186 (54%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS---IVTHDGVKL 133
+G++H+I+GPMF+GK+T LL R + G+ ++K KD RY DS IVTHD ++
Sbjct: 2 NGKLHLILGPMFSGKSTLLLTRYRRYRIAGKACLLVKYAKDCRYD-DSAAMIVTHDKLRY 60
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
A T L+ D DVI IDE QF+ D DF A+ GK V GL GD
Sbjct: 61 EATACTKLAEL-----DDLVQDYDVICIDEIQFYPDAADFADRWANQ-GKIVECCGLSGD 114
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y R F + +IP D +T + A C+ G A F+ R ++E + E+IGGSD Y V R
Sbjct: 115 YKREPFEQISRLIPRCDDITHVKAVCKSSGLDAPFSQRFSQEEEQEVIGGSDKYQAVSRA 174
Query: 254 HYVSGQ 259
Y+ Q
Sbjct: 175 VYLQQQ 180
>gi|150007356|ref|YP_001302099.1| thymidine kinase [Parabacteroides distasonis ATCC 8503]
gi|262382069|ref|ZP_06075207.1| thymidine kinase [Bacteroides sp. 2_1_33B]
gi|301310642|ref|ZP_07216581.1| thymidine kinase [Bacteroides sp. 20_3]
gi|423332111|ref|ZP_17309895.1| thymidine kinase [Parabacteroides distasonis CL03T12C09]
gi|423336893|ref|ZP_17314640.1| thymidine kinase [Parabacteroides distasonis CL09T03C24]
gi|149935780|gb|ABR42477.1| thymidine kinase [Parabacteroides distasonis ATCC 8503]
gi|262297246|gb|EEY85176.1| thymidine kinase [Bacteroides sp. 2_1_33B]
gi|300832216|gb|EFK62847.1| thymidine kinase [Bacteroides sp. 20_3]
gi|409229952|gb|EKN22824.1| thymidine kinase [Parabacteroides distasonis CL03T12C09]
gi|409239912|gb|EKN32695.1| thymidine kinase [Parabacteroides distasonis CL09T03C24]
Length = 196
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY D++V+HD +P
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SS F S ++DV+GIDEAQFF E L + C + A +G VIVAGLD DY
Sbjct: 76 VDSSSSILL-FTS----EIDVVGIDEAQFFDEGLVNVCNQLA-ANGIRVIVAGLDMDYKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG+ A+ + R K +G Y P+CR+ Y
Sbjct: 130 VPFGPMPELCAIADEVTKVHAICVKCGRLAYVSHRIVGNDKRVFLGEQSEYEPLCRECYA 189
Query: 257 SGQ 259
+
Sbjct: 190 KAE 192
>gi|255014013|ref|ZP_05286139.1| thymidine kinase [Bacteroides sp. 2_1_7]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY D++V+HD +P
Sbjct: 26 GRIEVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTP 85
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SS F S ++DV+GIDEAQFF E L + C + A +G VIVAGLD DY
Sbjct: 86 VDSSSSILL-FTS----EIDVVGIDEAQFFDEGLVNVCNQLA-ANGIRVIVAGLDMDYKG 139
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG+ A+ + R K +G Y P+CR+ Y
Sbjct: 140 VPFGPMPELCAIADEVTKVHAICVKCGRLAYVSHRIVGNDKRVFLGEQSEYEPLCRECYA 199
Query: 257 SGQ 259
+
Sbjct: 200 KAE 202
>gi|426239221|ref|XP_004013524.1| PREDICTED: thymidine kinase, cytosolic [Ovis aries]
Length = 251
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 92 TTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG---VKLPCCALTTLSSFRQKF 148
+T L+RR++ VIK +DTRY THD LP C L + Q
Sbjct: 46 STELMRRVRRFQIAQYKCLVIKYARDTRYS-SLFSTHDRNTMEALPACLLRDVIQDAQG- 103
Query: 149 GSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPL 208
V VIGIDE QFF D+ +FC A+ GKTVIVA LDG + R++FG++++++PL
Sbjct: 104 -------VAVIGIDEGQFFPDIVEFCENMAN-SGKTVIVAALDGTFQRKAFGTILNLVPL 155
Query: 209 ADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV---SGQVVV 262
A+SV KLTA C C + A +T R E + E+IGG+D Y VCR Y SGQ V
Sbjct: 156 AESVVKLTAVCMECFREAAYTKRLGVEKEVEVIGGADKYHSVCRLCYFKKPSGQPAV 212
>gi|429751054|ref|ZP_19284022.1| thymidine kinase [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429162810|gb|EKY05093.1| thymidine kinase [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 200
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + SG I VI G MF+GKT L+RR++ + V + K + DTRY +IV
Sbjct: 3 LENTINNAEKSGWIEVICGSMFSGKTEELIRRLRRAQFAKQRVEIFKPSFDTRYDDTNIV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + +S D DV+GIDEAQFF+D + + C A+ G V
Sbjct: 63 SHNANEIPSTPVEAAASILL-----LADGCDVVGIDEAQFFDDEIVNVCNALANR-GVRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY R FG + +++ A+ VTK+ A C G A ++ RK + ++G +D
Sbjct: 117 IVAGLDMDYKGRPFGPMPNLMATAEYVTKVHAVCTHTGNLAHYSYRKVANNEQRMLGEAD 176
Query: 246 IYMPVCRQHYV 256
Y PV R Y+
Sbjct: 177 SYEPVSRAAYI 187
>gi|452973699|gb|EME73521.1| thymidine kinase [Bacillus sonorensis L12]
Length = 194
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 100/186 (53%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY DSIV+H+G + C
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATFAKQEVKVFKPAIDNRYSDDSIVSHNGTAIVCH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++T+ + ++ DVIG+DE QFF E + D AD G VI AGLD D+
Sbjct: 67 SITSPKEIFEHIS----EKTDVIGVDEVQFFDETIIDTLTALADQ-GYRVIAAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG V D++ LA++VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GEPFGVVPDLMALAETVTKLQAVCSVCGSPASRTQRLINGKPASYHDPVILVGASEAYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|343471538|emb|CCD16067.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 256
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 95/170 (55%), Gaps = 6/170 (3%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MFAGKTT L+ R+ + VIK +KD Y ++I T+D LP T+S +
Sbjct: 1 MFAGKTTELMSRVNRNFLARYSCYVIKYSKDKGYTKENISTYDRRTLP----ATVSVNKL 56
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+A+ DVI +D QFF D+ +FC A+ GK VIVA LDGDY F + +I
Sbjct: 57 SEVGNAWHDYDVIAVDGGQFFPDILEFCSMVANA-GKKVIVAALDGDYRNEPFEHIAKLI 115
Query: 207 PLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
P A+SVTKL+A C C A++T R + + ELIGG+ +Y+ CR Y
Sbjct: 116 PAAESVTKLSAVCMSCKSCDAYYTHRTVQSEQRELIGGAGMYIATCRACY 165
>gi|224025941|ref|ZP_03644307.1| hypothetical protein BACCOPRO_02687 [Bacteroides coprophilus DSM
18228]
gi|224019177|gb|EEF77175.1| hypothetical protein BACCOPRO_02687 [Bacteroides coprophilus DSM
18228]
Length = 198
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ T + V + K + D RY + +V+HD +P
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRATFARQRVEIFKPSIDVRYSEEKVVSHDNNSIPSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF E L + C E A+ +G VIV GLD DY
Sbjct: 76 VDSSASILL-FTS----EIDVVGIDEAQFFDEGLTEVCNELAN-NGIRVIVVGLDMDYKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R K L+G + Y P+CR Y
Sbjct: 130 IPFGPIPSLCAIADEVTKVHAICVKCGDLAYVSHRTVHNDKRVLLGEKEEYEPLCRNCY 188
>gi|326799778|ref|YP_004317597.1| thymidine kinase [Sphingobacterium sp. 21]
gi|326550542|gb|ADZ78927.1| Thymidine kinase [Sphingobacterium sp. 21]
Length = 193
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVT 127
H+ + + P G I VI G MF+GKT L+RR++ V + K DTRY IV+
Sbjct: 6 HNFINKTGPKGSIEVICGSMFSGKTEELIRRLRRAQIAKLEVEIFKPTVDTRYATTEIVS 65
Query: 128 HDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVI 186
HD + + +SS G+ Q V+GIDEAQFF+D L + C A+ G VI
Sbjct: 66 HDKNSIQS-TVVEMSSAILLLGT----QTQVVGIDEAQFFDDNLPEVCNILAN-KGIRVI 119
Query: 187 VAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDI 246
VAGLD DY+ R FG + +++ +A+ VTK+ A C CG A ++ R + LIG +
Sbjct: 120 VAGLDMDYMGRPFGPIPNLMAIAEHVTKVHAVCVCCGAPANYSYRISTGNTRVLIGEKES 179
Query: 247 YMPVCRQHYVSGQ 259
Y P CR + G
Sbjct: 180 YEPRCRNCFYQGN 192
>gi|332666110|ref|YP_004448898.1| thymidine kinase [Haliscomenobacter hydrossis DSM 1100]
gi|332334924|gb|AEE52025.1| Thymidine kinase [Haliscomenobacter hydrossis DSM 1100]
Length = 191
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +P
Sbjct: 12 SGWIEVICGSMFSGKTEELIRRLRRAKIANQQVEIFKPKVDTRYDESKVVSHDANSIPS- 70
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
T + Q ++V V+GIDEAQFF+ DL C + A G VIVAGLD D+
Sbjct: 71 --TPIEHSDQLLALS--ERVSVVGIDEAQFFDLDLPRNCEKLA-MRGIRVIVAGLDMDFR 125
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG V ++ +A+ +TK+ A C CG A + R +EE T ++G ++Y P CR Y
Sbjct: 126 GAPFGPVPSLLAIAEYITKVHAICPHCGNLATHSYRLSEEEATVVLGEKNVYEPRCRTCY 185
Query: 256 VSGQVV 261
G+V+
Sbjct: 186 HLGKVI 191
>gi|304373400|ref|YP_003856609.1| Thymidine kinase [Mycoplasma hyorhinis HUB-1]
gi|378836079|ref|YP_005205355.1| thymidine kinase [Mycoplasma hyorhinis GDL-1]
gi|385858616|ref|YP_005905127.1| thymidine kinase [Mycoplasma hyorhinis MCLD]
gi|423263228|ref|YP_007013253.1| thymidine kinase [Mycoplasma hyorhinis SK76]
gi|304309591|gb|ADM22071.1| Thymidine kinase [Mycoplasma hyorhinis HUB-1]
gi|330723705|gb|AEC46075.1| thymidine kinase [Mycoplasma hyorhinis MCLD]
gi|367460864|gb|AEX14387.1| thymidine kinase [Mycoplasma hyorhinis GDL-1]
gi|422035765|gb|AFX74607.1| Thymidine kinase [Mycoplasma hyorhinis SK76]
Length = 192
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L++RI+ + +K D+R+ + IV+ G K+P
Sbjct: 8 GTIEVITGPMFSGKSDELIKRIRTLSYANVKTLAVKPRIDSRFSTNEIVSRAGTKIPTYV 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ T++ + F Y I IDEAQFF+ DL + E A+ G VI+ GLD DYLR
Sbjct: 68 VETVADIKSLFEKSKYK---AIAIDEAQFFDKDLVPYVEELANQ-GIRVIICGLDQDYLR 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
R FG + ++ +A+ +TKL A C C A T R + K ++IG D Y CR
Sbjct: 124 RPFGVMPSLLAMAEHITKLQAICVICKNAASTTFRTIKSNKLKVIGDLDEYEARCR 179
>gi|380692364|ref|ZP_09857223.1| thymidine kinase [Bacteroides faecis MAJ27]
Length = 199
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+D L D CR+ A+ +G VI+AGLD D+
Sbjct: 76 IDSSASI-LLFTS----EIDVVGIDEAQFFDDGLIDVCRQLAN-NGIRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPQLCAIADEVSKVHAICVKCGDLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
Query: 257 SGQ 259
+
Sbjct: 190 RAR 192
>gi|29347685|ref|NP_811188.1| thymidine kinase [Bacteroides thetaiotaomicron VPI-5482]
gi|298388100|ref|ZP_06997645.1| thymidine kinase [Bacteroides sp. 1_1_14]
gi|60390098|sp|Q8A5G4.1|KITH_BACTN RecName: Full=Thymidine kinase
gi|29339586|gb|AAO77382.1| thymidine kinase [Bacteroides thetaiotaomicron VPI-5482]
gi|298259130|gb|EFI02009.1| thymidine kinase [Bacteroides sp. 1_1_14]
Length = 199
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+D L D CR+ A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDDGLIDVCRQLAN-NGIRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPQLCAIADEVSKVHAICVKCGDLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
Query: 257 SGQ 259
+
Sbjct: 190 RAR 192
>gi|50365450|ref|YP_053875.1| thymidine kinase [Mesoplasma florum L1]
gi|60389976|sp|Q6F0I2.1|KITH_MESFL RecName: Full=Thymidine kinase
gi|50364006|gb|AAT75991.1| thymidine, deoxyuridine kinase [Mesoplasma florum L1]
Length = 203
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 9/186 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + +I G MFAGKT ++R++ RNV K DTRY ++ + +H G LP
Sbjct: 14 GWVELITGCMFAGKTEEFIKRLRRHAFAKRNVIAFKPVIDTRYAVNEVASHAGTLLPSIP 73
Query: 138 LTTLSSFRQKFGSDAYDQ-VDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + ++K + ++ VDV+GIDE QFF++ + D+ E AD G VIV GLD D+
Sbjct: 74 VNSTAELKEKLEAKILEKKVDVVGIDEIQFFDEAIVDYIEELADR-GIIVIVTGLDKDFR 132
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
+ F +V I+PLA+ V KLTA C+ CG A T R + + L+ G+D Y
Sbjct: 133 SQPFKNVDRILPLAEMVDKLTAICQKCGNFANRTQRIIDGKPADWNSPLILVDGNDSYEA 192
Query: 250 VCRQHY 255
CR Y
Sbjct: 193 RCRNCY 198
>gi|389816679|ref|ZP_10207631.1| thymidine kinase [Planococcus antarcticus DSM 14505]
gi|388465052|gb|EIM07374.1| thymidine kinase [Planococcus antarcticus DSM 14505]
Length = 198
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 18/193 (9%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG-- 130
V +G + +I G MF+GK+ L+RR++ + +AV K D RY + +V+H+G
Sbjct: 3 VMKQTGWVELICGSMFSGKSEELIRRVRRSQFAKQKIAVFKPKIDDRYSKEEVVSHNGAT 62
Query: 131 -VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVA 188
+ LP T + + D+ DVI IDEAQFF ED+ + ++ A+H G VIVA
Sbjct: 63 VIALPISCSTEMWEY-------ITDEFDVIAIDEAQFFDEDIIENVQKLANH-GFRVIVA 114
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD D+ R FG + ++ +A+ VTKL A C CG A T R + + T L+G
Sbjct: 115 GLDQDFRGRPFGPMPALLAIAEQVTKLQAVCTVCGSPASRTQRLIDGKPAGSDDPTILVG 174
Query: 243 GSDIYMPVCRQHY 255
S+ Y P CR H+
Sbjct: 175 ASEAYEPRCRHHH 187
>gi|54020273|ref|YP_116135.1| thymidine kinase [Mycoplasma hyopneumoniae 232]
gi|71893959|ref|YP_279405.1| thymidine kinase [Mycoplasma hyopneumoniae J]
gi|72080936|ref|YP_287994.1| thymidine kinase [Mycoplasma hyopneumoniae 7448]
gi|385334767|ref|YP_005888714.1| thymidine kinase [Mycoplasma hyopneumoniae 168]
gi|60389918|sp|Q5ZZT0.1|KITH_MYCH2 RecName: Full=Thymidine kinase
gi|109892485|sp|Q4A7B8.1|KITH_MYCH7 RecName: Full=Thymidine kinase
gi|109892486|sp|Q4A977.1|KITH_MYCHJ RecName: Full=Thymidine kinase
gi|53987446|gb|AAV27647.1| thymidine kinase [Mycoplasma hyopneumoniae 232]
gi|71852086|gb|AAZ44694.1| thymidine kinase [Mycoplasma hyopneumoniae J]
gi|71914060|gb|AAZ53971.1| thymidine kinase [Mycoplasma hyopneumoniae 7448]
gi|312601553|gb|ADQ90808.1| Thymidine kinase [Mycoplasma hyopneumoniae 168]
Length = 184
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L++RI+ T VIK + D R+ IV+ G+K+P
Sbjct: 8 GVIEVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFL 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T R F D Y I IDE QFF E++ F + AD G VIV+GLD D+ R
Sbjct: 68 ARTTQEIRDLFTRDNYQ---AIAIDEIQFFDEEIVTFLEQIADK-GIRVIVSGLDQDFRR 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+ FGS+ +++ +A++VTKL A C C + A T RK LIG D Y CR
Sbjct: 124 KPFGSLPNLMAIAENVTKLQAVCSLCKRAATTTARKVLNEAQTLIGDQDEYEARCR 179
>gi|317122072|ref|YP_004102075.1| thymidine kinase [Thermaerobacter marianensis DSM 12885]
gi|315592052|gb|ADU51348.1| Thymidine kinase [Thermaerobacter marianensis DSM 12885]
Length = 266
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GKT LLRR+Q R V + K + D RY D++ +HDG L
Sbjct: 2 AGYLEVITGGMFSGKTEELLRRVQRARIARRQVLLCKPDLDHRYRRDAVASHDGRDL-QA 60
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ + + DV+GIDEAQFF +G+ VIV+GLD D+ R
Sbjct: 61 AVVPAGRPEELLALARAARADVVGIDEAQFFAPGIVPTVLELVAEGRRVIVSGLDMDFAR 120
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
R FG + +++ +AD V KL A C CG+ A FT R + LIGG + Y P
Sbjct: 121 RPFGPMPELMAVADEVVKLKAICVVCGEPATFTQRLIGGRPAAPDDPVILIGGQESYEPR 180
Query: 251 CRQHY 255
CR+H+
Sbjct: 181 CRRHH 185
>gi|131840081|ref|YP_001096090.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|27227778|emb|CAD59379.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|84181586|gb|ABC55189.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706656|gb|ABG42882.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661588|dbj|BAH79679.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661590|dbj|BAH79680.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661592|dbj|BAH79681.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661594|dbj|BAH79682.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661596|dbj|BAH79683.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|380850679|gb|AFE85868.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 216
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCCAL 138
+ +++GPMFAGK+T RR++ + GR +K D RY +S + H G P +
Sbjct: 4 LELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISA 63
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
L Q+ ++ D + +DE QFF DLY+ + GK VIVA LDGD++++
Sbjct: 64 GYLYEVMQRL-----EEYDAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQP 117
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
F V ++P+AD + KLTA C C R A FT+R ++ T +GG++ Y VCR
Sbjct: 118 FKQVTALVPMADKLDKLTAVCMKCKMRDAPFTVRISQGTDLVQVGGAESYQAVCR 172
>gi|129560572|dbj|BAF48867.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661598|dbj|BAH79684.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661600|dbj|BAH79685.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145864|gb|ADQ28639.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145866|gb|ADQ28640.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145868|gb|ADQ28641.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145870|gb|ADQ28642.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145872|gb|ADQ28643.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145874|gb|ADQ28644.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145876|gb|ADQ28645.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145878|gb|ADQ28646.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145880|gb|ADQ28647.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145882|gb|ADQ28648.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145884|gb|ADQ28649.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145886|gb|ADQ28650.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145888|gb|ADQ28651.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145890|gb|ADQ28652.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145892|gb|ADQ28653.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145894|gb|ADQ28654.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145896|gb|ADQ28655.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|343887634|gb|AEM65309.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|380850677|gb|AFE85867.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 224
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCCAL 138
+ +++GPMFAGK+T RR++ + GR +K D RY +S + H G P +
Sbjct: 4 LELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISA 63
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
L Q+ ++ D + +DE QFF DLY+ + GK VIVA LDGD++++
Sbjct: 64 GYLYEVMQRL-----EEYDAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQP 117
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
F V ++P+AD + KLTA C C R A FT+R ++ T +GG++ Y VCR
Sbjct: 118 FKQVTALVPMADKLDKLTAVCMKCKMRDAPFTVRISQGTDLVQVGGAESYQAVCR 172
>gi|284504261|ref|YP_003406976.1| thymidine kinase [Marseillevirus]
gi|282935699|gb|ADB04014.1| thymidine kinase [Marseillevirus]
Length = 186
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 26/189 (13%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV---THDGV----- 131
+ +I GPM +GKTT L RR+ + G V + S+KDTR G D V TH+
Sbjct: 5 LEIICGPMRSGKTTELRRRLGVFSSIGFKVLYVNSSKDTRKGPDGSVAFSTHNSELSGKN 64
Query: 132 -KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD--HDGKTVIVA 188
+ C +T + + DVIGIDEAQFF++ DF E + GK VI++
Sbjct: 65 DSISCQKVTFIKEVE-------FSPFDVIGIDEAQFFKE-EDFPEEIMEMVRSGKRVIIS 116
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKR-----AFFTLRKTEETKTELIGG 243
GLDGD+ ++ G ++++P ADSV KL A C+FC KR A FT R TE+ + E++G
Sbjct: 117 GLDGDFEQKKMGKFLELLPQADSVAKLLASCDFCAKRKLMVPAPFTKRLTEDKEQEVVG- 175
Query: 244 SDIYMPVCR 252
++Y VCR
Sbjct: 176 -NLYASVCR 183
>gi|376316374|emb|CCF99767.1| thymidine kinase [uncultured Flavobacteriia bacterium]
Length = 213
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ V + K + D RYG D +V+HD ++ +
Sbjct: 14 GWIEVITGSMFSGKTEELIRRLKRAKFANLKVEIFKPDVDNRYGTDKVVSHDSSEIISTS 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
++ ++ R D DV+GIDEAQFF+D + C + A+H G VIVAGLD D+
Sbjct: 74 VSAAANIRL-----LADNCDVVGIDEAQFFDDEIVRVCNDLANH-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + +++ A+ VTK+ A C G+ A + RK E ++G ++ Y P+ R +
Sbjct: 128 NPFGPIPNLMATAEYVTKVHAICTRTGELAHHSFRKGENDSLVMLGETEEYEPLSRAAF 186
>gi|282880124|ref|ZP_06288844.1| thymidine kinase [Prevotella timonensis CRIS 5C-B1]
gi|281305997|gb|EFA98037.1| thymidine kinase [Prevotella timonensis CRIS 5C-B1]
Length = 199
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 59 LFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDT 118
L ++ N L + +S P G I V+ G MF+GKT L+RR++ + V + K D
Sbjct: 2 LINIYNDRL-CDWRISRP-GRIEVVCGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAMDV 59
Query: 119 RYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREA 177
RY + +V+HD +P + T SS + +DV+GIDEAQF + L D C +
Sbjct: 60 RYSAEDVVSHDQNSIPSTPIDTSSSILLLASN-----IDVVGIDEAQFLDQGLIDVCNQL 114
Query: 178 ADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETK 237
A+ G VIVAGLD D+ + FG + + +AD V K+ A C CG A+ + R + K
Sbjct: 115 ANK-GIRVIVAGLDMDFQGKPFGPIPGLCAIADEVVKVHAICVKCGALAYISHRLVDNDK 173
Query: 238 TELIGGSDIYMPVCRQHY 255
L+G Y P+CR+ Y
Sbjct: 174 RVLLGEKQTYEPLCRECY 191
>gi|424844011|ref|ZP_18268636.1| thymidine kinase [Saprospira grandis DSM 2844]
gi|395322209|gb|EJF55130.1| thymidine kinase [Saprospira grandis DSM 2844]
Length = 184
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS---IVTHDGVKL 133
+G++H+I+GPMF+GK+T LL R + G+ ++K KD RY DS IVTHD ++
Sbjct: 2 NGKLHLILGPMFSGKSTLLLTRYRRYRIAGKACLLVKYAKDRRYD-DSAAMIVTHDKLRY 60
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
A T L+ D DVI IDE QF+ D DF A+ GK V GL GD
Sbjct: 61 EATACTKLAEL-----DDLVQDYDVICIDEIQFYPDAADFADRWANQ-GKIVECCGLSGD 114
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y R F + +IP D +T + A C+ G A F+ R + E + E+IGG+D Y V R
Sbjct: 115 YKREPFEQISRLIPRCDDITHVKAVCKSSGLDAPFSQRFSLEEEQEVIGGADKYQAVSRA 174
Query: 254 HYVSGQ 259
Y Q
Sbjct: 175 VYWQQQ 180
>gi|334364655|ref|ZP_08513635.1| thymidine kinase [Alistipes sp. HGB5]
gi|390946559|ref|YP_006410319.1| thymidine kinase [Alistipes finegoldii DSM 17242]
gi|313159031|gb|EFR58406.1| thymidine kinase [Alistipes sp. HGB5]
gi|390423128|gb|AFL77634.1| thymidine kinase [Alistipes finegoldii DSM 17242]
Length = 193
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 7/181 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 6 ASRKGWIEVICGSMFSGKTEELIRRLKRAKFANQKVEIFKPRIDVRYSEEEVVSHDANAI 65
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDG 192
T + S R + VD++GIDEAQFF+D + + CRE AD G VIVAGLD
Sbjct: 66 RS---TPVDSARNILLMTS--DVDIVGIDEAQFFDDGIIEVCRELAD-SGVRVIVAGLDM 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY + FG + ++ A+ VTK+ A C CG A + R T++ K ++G +D Y +CR
Sbjct: 120 DYTGKPFGPMPALMATAEYVTKVHAICVRCGNLAHHSHRLTQDEKLVMLGETDSYEAICR 179
Query: 253 Q 253
Sbjct: 180 H 180
>gi|167754865|ref|ZP_02426992.1| hypothetical protein CLORAM_00369 [Clostridium ramosum DSM 1402]
gi|237735403|ref|ZP_04565884.1| thymidine kinase [Mollicutes bacterium D7]
gi|365829785|ref|ZP_09371376.1| hypothetical protein HMPREF1021_00140 [Coprobacillus sp. 3_3_56FAA]
gi|374626605|ref|ZP_09699017.1| hypothetical protein HMPREF0978_02337 [Coprobacillus sp.
8_2_54BFAA]
gi|167704915|gb|EDS19494.1| thymidine kinase [Clostridium ramosum DSM 1402]
gi|229381148|gb|EEO31239.1| thymidine kinase [Coprobacillus sp. D7]
gi|365264366|gb|EHM94175.1| hypothetical protein HMPREF1021_00140 [Coprobacillus sp. 3_3_56FAA]
gi|373914133|gb|EHQ45966.1| hypothetical protein HMPREF0978_02337 [Coprobacillus sp.
8_2_54BFAA]
Length = 196
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MFAGKT L+RRI + +N+ V K D RY IV+H G K+PC
Sbjct: 7 EGWIEVISGCMFAGKTEELIRRINVLSYAKKNIIVFKPKIDNRYSDSEIVSHSGAKVPCL 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ +K +D +V+ IDE QFF+ D+ + C AD G V+VAGLD D+
Sbjct: 67 VVEKAQDILKKIEADT----EVVAIDEVQFFDKDIVEVCEYLADK-GIRVMVAGLDKDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
SFG + +++ A+ VTKLTA C CG A T R E ++G + Y P
Sbjct: 122 GESFGVMPELLTRAEFVTKLTAVCAKCGAPATRTQRLVNGKPAGFEDPIVMVGADESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|255693729|ref|ZP_05417404.1| thymidine kinase [Bacteroides finegoldii DSM 17565]
gi|260620480|gb|EEX43351.1| thymidine kinase [Bacteroides finegoldii DSM 17565]
Length = 199
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLVDVCNQLAN-NGIRVIVAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPQLCAIADEVSKVHAICVKCGQLASFSHRTVKNEKQVLLGETSEYEPLCRECYL 189
Query: 257 SGQ 259
+
Sbjct: 190 RAR 192
>gi|224538327|ref|ZP_03678866.1| hypothetical protein BACCELL_03218 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520049|gb|EEF89154.1| hypothetical protein BACCELL_03218 [Bacteroides cellulosilyticus
DSM 14838]
Length = 201
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF++ L D C E A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDNGLIDVCNELAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 LPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
>gi|423227550|ref|ZP_17213990.1| thymidine kinase [Bacteroides cellulosilyticus CL02T12C19]
gi|392622964|gb|EIY17074.1| thymidine kinase [Bacteroides cellulosilyticus CL02T12C19]
Length = 201
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF++ L D C E A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDNGLIDVCNELAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 LPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
>gi|284433306|gb|ADB85004.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|284433308|gb|ADB85005.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 197
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCCAL 138
+ +++GPMFAGK+T RR++ + GR +K D RY +S + H G P +
Sbjct: 2 LELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISA 61
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
L Q+ ++ D + +DE QFF DLY+ + GK VIVA LDGD++++
Sbjct: 62 GYLYEVMQRL-----EEYDAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQP 115
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
F V ++P+AD + KLTA C C R A FT+R ++ T +GG++ Y VCR
Sbjct: 116 FKQVTALVPMADKLDKLTAVCMKCKMRDAPFTVRISQGTDLVQVGGAESYQAVCR 170
>gi|291515682|emb|CBK64892.1| Thymidine kinase [Alistipes shahii WAL 8301]
Length = 191
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 99/181 (54%), Gaps = 7/181 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S G I V+ G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 6 ASRKGWIEVVCGSMFSGKTEELIRRLKRAKFAHQRVEIFKPRIDVRYSEEEVVSHDANAI 65
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
T + S + A VDV+GIDEAQFF E + D CR A+ +G VIVAGLD
Sbjct: 66 RS---TPVESPQNILLMTA--DVDVVGIDEAQFFDESIVDVCRRLAN-NGVRVIVAGLDM 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY + FG + ++ A+ VTK+ A C CG A + R T + K ++G D Y P+CR
Sbjct: 120 DYTGKPFGPMPALMATAEYVTKVHAICVRCGNLAHHSHRLTSDEKQVMLGAQDSYEPICR 179
Query: 253 Q 253
Sbjct: 180 H 180
>gi|359406144|ref|ZP_09198856.1| thymidine kinase [Prevotella stercorea DSM 18206]
gi|357556696|gb|EHJ38278.1| thymidine kinase [Prevotella stercorea DSM 18206]
Length = 200
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I V+ G MF+GKT L+RRI+ T + V + K DTRY + +V+HD +
Sbjct: 12 QGRIEVVCGSMFSGKTEELIRRIKRATFARQRVVIFKPQIDTRYSEEEVVSHDRNAVMSV 71
Query: 137 ALTTLSSFRQKF-----GSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGL 190
L+T + ++ YD DV+GIDEAQFF DL + C + A+ +G VI+AGL
Sbjct: 72 PLSTSKEILEYVQNHTTSTEGYD-FDVVGIDEAQFFGMDLVEVCNQLAN-NGVRVIIAGL 129
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
D D+ FG + + +AD VTK+ A C CG A+ + R + LIG Y P+
Sbjct: 130 DMDFQCTPFGPIPALCAVADEVTKVHAICVKCGALAYVSHRLVHDQNQVLIGEQTEYEPL 189
Query: 251 CRQHY 255
CR+ Y
Sbjct: 190 CRECY 194
>gi|7674111|sp|Q9ZIG2.1|KITH_RHOSI RecName: Full=Thymidine kinase
gi|4090937|gb|AAC98909.1| thymidine kinase [Rhodothermus sp. 'ITI 518']
Length = 213
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V V K D RY +V+HD L
Sbjct: 15 GWIEVICGSMFSGKTEELIRRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRS-- 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + S Q D DV+GIDEAQFF+ L D C++ A+ DGK VIVAGLD +Y+
Sbjct: 73 -TPVDSAEQILL--LADSADVVGIDEAQFFDMTLVDVCQQLAN-DGKRVIVAGLDQEYMG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R + + +A+ VTKL A C CG A + R T+E ++G +D Y P CR+ +
Sbjct: 129 RPLEPMPQFMAVAEYVTKLHAICAVCGAPANHSQRLTDEEGRVVLGAADRYEPRCRRCF 187
>gi|189468267|ref|ZP_03017052.1| hypothetical protein BACINT_04663 [Bacteroides intestinalis DSM
17393]
gi|189436531|gb|EDV05516.1| thymidine kinase [Bacteroides intestinalis DSM 17393]
Length = 201
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF++ L D C E A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDNGLIDVCNELAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 FPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
>gi|213963253|ref|ZP_03391510.1| thymidine kinase [Capnocytophaga sputigena Capno]
gi|213954115|gb|EEB65440.1| thymidine kinase [Capnocytophaga sputigena Capno]
Length = 196
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K DTRY +IV
Sbjct: 3 LENTVNNNEKAGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPAFDTRYDDTNIV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + SS D DV+GIDEAQFF+D + + C E A+ G V
Sbjct: 63 SHNANEIPSTPVEAASSIML-----LADGCDVVGIDEAQFFDDEIVNVCNELANR-GMRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY R FG + ++ A+ VTK+ A C G A ++ RK + ++G +D
Sbjct: 117 IVAGLDMDYKGRPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVANDQQRMLGEAD 176
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 177 SYEPLSRAAF 186
>gi|429754152|ref|ZP_19286895.1| thymidine kinase [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429170286|gb|EKY11981.1| thymidine kinase [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 197
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K DTRY +IV
Sbjct: 4 LENTVNNNEKTGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPAFDTRYDDTNIV 63
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + SS D DV+GIDEAQFF+D + + C E A+ G V
Sbjct: 64 SHNANEIPSTPVEAASSIML-----LADGCDVVGIDEAQFFDDEIVNVCNELANR-GMRV 117
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY R FG + ++ A+ VTK+ A C G A ++ RK + ++G +D
Sbjct: 118 IVAGLDMDYKGRPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVANDQQRMLGEAD 177
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 178 SYEPLSRAAF 187
>gi|387928385|ref|ZP_10131063.1| thymidine kinase [Bacillus methanolicus PB1]
gi|387587971|gb|EIJ80293.1| thymidine kinase [Bacillus methanolicus PB1]
Length = 207
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG I VI G MF+GK+ L+RR++ + +AV K D RY +++V+H+G
Sbjct: 3 VMKQSGWIEVICGSMFSGKSEELIRRVRRALFAKQKIAVFKPKIDNRYSDEAVVSHNGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
++ + Q +D VDVI IDE QFF+ D+ D ++ A+ G VI AGLD
Sbjct: 63 FTATPISHSTEIFQHIDTD----VDVIAIDEVQFFDKDIADVLQQLAN-SGYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG + I+ +A+ VTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGEMPKIMAIAEQVTKLQAVCAVCGSPASRTQRLINGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|385809422|ref|YP_005845818.1| thymidine kinase [Ignavibacterium album JCM 16511]
gi|383801470|gb|AFH48550.1| Thymidine kinase [Ignavibacterium album JCM 16511]
Length = 189
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 101/187 (54%), Gaps = 8/187 (4%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++ + +G I VI G MF+GKT L++R++ + + + K D RY DSIV+H
Sbjct: 5 AIPNGTGWIEVIAGCMFSGKTEELIKRLKRAQIAKQKLKIFKPAIDIRYSSDSIVSHSEQ 64
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGL 190
+P AL + DA VIGIDEAQFF DL D C E A+ GK VIVAGL
Sbjct: 65 SMPS-ALVRHAKEILSLSDDA----QVIGIDEAQFFSNDLVDVCIELANK-GKRVIVAGL 118
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
D DY F + ++ +A+ +TKL A C CG A T RK ++G SD+Y
Sbjct: 119 DQDYRGVPFEPMPQLLAVAEYITKLHAICVVCGNPANKTQRKVAVKDRVVVGASDMYEAR 178
Query: 251 CRQ-HYV 256
CR+ HY+
Sbjct: 179 CRKCHYI 185
>gi|326335800|ref|ZP_08201980.1| thymidine kinase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692039|gb|EGD33998.1| thymidine kinase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 198
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+S+ G I VI G MF+GKT L+RR++ + +A+ K DTR+ + IV+H+ +
Sbjct: 8 ISNTFGWIEVICGSMFSGKTEELIRRLRRAEFAKQKIAIFKPEIDTRFRKECIVSHNTTQ 67
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ + + ++ R +VIGIDEAQFF D+ + C + A+ G VIVAGLD
Sbjct: 68 IKAIPVQSATNIR-----ILAQNCEVIGIDEAQFFSSDIVEVCNDLAN-SGVRVIVAGLD 121
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
D+L R FG + ++ +A+ VTK+ A C G A ++ RK E L+G + Y P+
Sbjct: 122 MDFLGRPFGPMPALMAIAEYVTKVHAICTRTGNLAHYSFRKASEQSQFLLGEKEEYEPLS 181
Query: 252 RQHYVSGQV 260
R Y V
Sbjct: 182 RAAYYQAMV 190
>gi|198276101|ref|ZP_03208632.1| hypothetical protein BACPLE_02289 [Bacteroides plebeius DSM 17135]
gi|198270913|gb|EDY95183.1| thymidine kinase [Bacteroides plebeius DSM 17135]
Length = 202
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ T + V + K + DTRY + +V+HD +
Sbjct: 20 GRIEVICGSMFSGKTEELIRRLRRATFAHQRVEIFKPSIDTRYSEEEVVSHDNNSIKSTP 79
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+D L + C E A+ G VI+AGLD D+
Sbjct: 80 IDSSASILL-FTS----EIDVVGIDEAQFFDDGLPEVCNELANR-GVRVIIAGLDMDFKG 133
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R K L+G + Y P+CR Y
Sbjct: 134 VPFGPIPALCAIADEVTKVHAICVKCGNLAYVSHRTVLNDKRVLLGEKEEYEPLCRCCY 192
>gi|427387300|ref|ZP_18883356.1| thymidine kinase [Bacteroides oleiciplenus YIT 12058]
gi|425725461|gb|EKU88332.1| thymidine kinase [Bacteroides oleiciplenus YIT 12058]
Length = 201
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 16/197 (8%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGVRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 LPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
Query: 257 SGQVVVEAARIVLESQK 273
R V E QK
Sbjct: 190 ---------RAVKEDQK 197
>gi|429739292|ref|ZP_19273052.1| thymidine kinase [Prevotella saccharolytica F0055]
gi|429157257|gb|EKX99858.1| thymidine kinase [Prevotella saccharolytica F0055]
Length = 192
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ ++V + K + DTRY + +V+HD + C
Sbjct: 13 GRIEVVCGSMFSGKTEELIRRMKRAVFAKQSVEIFKPSIDTRYSEEDVVSHDHNSITCTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S+ +D +DV+GIDEAQF E L D C E A+ G VIVAGLD D+
Sbjct: 73 IDSSSAILL-LAAD----IDVVGIDEAQFLDEGLVDVCNELANK-GVRVIVAGLDMDFKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R +E + L+G Y P+CR Y
Sbjct: 127 IPFGPMPALCAIADDVTKVHAICVKCGSLAYVSHRIVDEERRVLVGEKMEYEPLCRSCY 185
>gi|423302818|ref|ZP_17280840.1| thymidine kinase [Bacteroides finegoldii CL09T03C10]
gi|408470694|gb|EKJ89228.1| thymidine kinase [Bacteroides finegoldii CL09T03C10]
Length = 199
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S F S ++DV+GIDEAQFF+ L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSVSILL-FTS----EIDVVGIDEAQFFDSGLVDVCNQLAN-NGIRVIVAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPQLCAIADEVSKVHAICVKCGQLASFSHRTVKNEKQVLLGETSEYEPLCRECYL 189
Query: 257 SGQ 259
+
Sbjct: 190 RAR 192
>gi|160885073|ref|ZP_02066076.1| hypothetical protein BACOVA_03071 [Bacteroides ovatus ATCC 8483]
gi|237718221|ref|ZP_04548702.1| thymidine kinase [Bacteroides sp. 2_2_4]
gi|262406787|ref|ZP_06083336.1| thymidine kinase [Bacteroides sp. 2_1_22]
gi|293370048|ref|ZP_06616615.1| thymidine kinase [Bacteroides ovatus SD CMC 3f]
gi|294646014|ref|ZP_06723679.1| thymidine kinase [Bacteroides ovatus SD CC 2a]
gi|294806045|ref|ZP_06764905.1| thymidine kinase [Bacteroides xylanisolvens SD CC 1b]
gi|298484322|ref|ZP_07002484.1| thymidine kinase [Bacteroides sp. D22]
gi|299147769|ref|ZP_07040832.1| thymidine kinase [Bacteroides sp. 3_1_23]
gi|336402833|ref|ZP_08583559.1| thymidine kinase [Bacteroides sp. 1_1_30]
gi|336416521|ref|ZP_08596854.1| thymidine kinase [Bacteroides ovatus 3_8_47FAA]
gi|345508782|ref|ZP_08788406.1| thymidine kinase [Bacteroides sp. D1]
gi|383112282|ref|ZP_09933079.1| thymidine kinase [Bacteroides sp. D2]
gi|423215622|ref|ZP_17202149.1| thymidine kinase [Bacteroides xylanisolvens CL03T12C04]
gi|423292218|ref|ZP_17270828.1| thymidine kinase [Bacteroides ovatus CL02T12C04]
gi|423297095|ref|ZP_17275165.1| thymidine kinase [Bacteroides ovatus CL03T12C18]
gi|156109423|gb|EDO11168.1| thymidine kinase [Bacteroides ovatus ATCC 8483]
gi|229446654|gb|EEO52445.1| thymidine kinase [Bacteroides sp. D1]
gi|229452405|gb|EEO58196.1| thymidine kinase [Bacteroides sp. 2_2_4]
gi|262355490|gb|EEZ04581.1| thymidine kinase [Bacteroides sp. 2_1_22]
gi|292634966|gb|EFF53488.1| thymidine kinase [Bacteroides ovatus SD CMC 3f]
gi|292638585|gb|EFF56938.1| thymidine kinase [Bacteroides ovatus SD CC 2a]
gi|294446764|gb|EFG15371.1| thymidine kinase [Bacteroides xylanisolvens SD CC 1b]
gi|295084672|emb|CBK66195.1| Thymidine kinase [Bacteroides xylanisolvens XB1A]
gi|298269512|gb|EFI11111.1| thymidine kinase [Bacteroides sp. D22]
gi|298513952|gb|EFI37838.1| thymidine kinase [Bacteroides sp. 3_1_23]
gi|313696410|gb|EFS33245.1| thymidine kinase [Bacteroides sp. D2]
gi|335937578|gb|EGM99476.1| thymidine kinase [Bacteroides ovatus 3_8_47FAA]
gi|335947597|gb|EGN09383.1| thymidine kinase [Bacteroides sp. 1_1_30]
gi|392661875|gb|EIY55445.1| thymidine kinase [Bacteroides ovatus CL02T12C04]
gi|392668120|gb|EIY61623.1| thymidine kinase [Bacteroides ovatus CL03T12C18]
gi|392691599|gb|EIY84841.1| thymidine kinase [Bacteroides xylanisolvens CL03T12C04]
Length = 199
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGIRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPQLCAIADEVSKVHAICVKCGQLASFSHRTVKNEKQVLLGETAEYEPLCRECYL 189
Query: 257 SGQ 259
+
Sbjct: 190 RAR 192
>gi|153808651|ref|ZP_01961319.1| hypothetical protein BACCAC_02950 [Bacteroides caccae ATCC 43185]
gi|423220735|ref|ZP_17207229.1| thymidine kinase [Bacteroides caccae CL03T12C61]
gi|149128477|gb|EDM19695.1| thymidine kinase [Bacteroides caccae ATCC 43185]
gi|392622781|gb|EIY16896.1| thymidine kinase [Bacteroides caccae CL03T12C61]
Length = 199
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 103/180 (57%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDICNQLAN-NGVRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPQLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
>gi|374385695|ref|ZP_09643198.1| hypothetical protein HMPREF9449_01584 [Odoribacter laneus YIT
12061]
gi|373225397|gb|EHP47731.1| hypothetical protein HMPREF9449_01584 [Odoribacter laneus YIT
12061]
Length = 204
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S +G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 6 ASKAGWIEVICGSMFSGKTEELIRRLKRAQFARQKVEIFKPKIDIRYSEEEVVSHDANAI 65
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDG 192
+ + G VDV+GIDEAQFF+ ++ + C++ A+ +G VIVAGLD
Sbjct: 66 RSTPVENSGNILLLTGD-----VDVVGIDEAQFFDANIVEVCQKLAN-NGIRVIVAGLDM 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+L + FG + ++ +A+ V+K+ A C CG A + R + + ++G DIY P+CR
Sbjct: 120 DFLGKPFGPMPQLMAIAEYVSKVHAICVHCGNLAHHSHRLADNDRLVVLGEKDIYEPLCR 179
Query: 253 QHYVSGQV 260
+ ++
Sbjct: 180 HCFNQAKI 187
>gi|224541465|ref|ZP_03682004.1| hypothetical protein CATMIT_00634 [Catenibacterium mitsuokai DSM
15897]
gi|224525623|gb|EEF94728.1| thymidine kinase, partial [Catenibacterium mitsuokai DSM 15897]
Length = 208
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MFAGKT L+RRI + +N+ V K D RY I +H G K+PC
Sbjct: 7 EGWIEVICGCMFAGKTEELIRRINVLSYARKNILVFKPKIDDRYSTTEIASHAGSKVPC- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+S ++ YD DV+ IDE QFF ED+ D C AD G V+VAGLD D+
Sbjct: 66 --IVISEAKEILDHVNYD-TDVVAIDEVQFFDEDVVDICEYLAD-SGLRVMVAGLDKDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG + D++ A+ VTKLTA C CG A T R L+G + Y P
Sbjct: 122 GEPFGVLPDLLTRAEFVTKLTAVCAKCGAPATRTQRIINGKPASFNDPIVLVGAKEAYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|325279036|ref|YP_004251578.1| Thymidine kinase [Odoribacter splanchnicus DSM 20712]
gi|324310845|gb|ADY31398.1| Thymidine kinase [Odoribacter splanchnicus DSM 20712]
Length = 191
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 100/181 (55%), Gaps = 7/181 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
++ +G I V+ G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 6 TNRAGWIEVVCGSMFSGKTEELIRRLKRAQFARQKVEIFKPKIDVRYSDEDVVSHDANTI 65
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDG 192
C + + G VDV+GIDEAQFF+ ++ C+ AD +G VIVAGLD
Sbjct: 66 RCTPVENSGNILLLTGD-----VDVVGIDEAQFFDSNIVSVCKTLAD-NGIRVIVAGLDM 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY + FG + D++ +A+ VTK+ A C CG A + R ++ K ++G Y P+CR
Sbjct: 120 DYTGKPFGPMPDLMAVAEYVTKVHAICVRCGNLAHHSHRLSDNDKLVMLGEKHDYEPICR 179
Query: 253 Q 253
Sbjct: 180 H 180
>gi|403383674|ref|ZP_10925731.1| thymidine kinase [Kurthia sp. JC30]
Length = 200
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V S +G + VI G MF+GK+ L+RR++ + +AV K D RY +++V+H+G
Sbjct: 3 VMSQNGWVEVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPKLDNRYSEEAVVSHNGTT 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + D+ D+I IDEAQFF ED+ D ++ ADH G VI+AGLD
Sbjct: 63 VIAHPIEKTEEMWNYID----DEYDLIAIDEAQFFGEDIIDTVQKLADH-GFRVILAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSD 245
D+ FG + ++ +A+ VTKL A C CG A T R E K + L+G S+
Sbjct: 118 QDFKGVPFGPMPFLMAIAEQVTKLQAVCSVCGSPASRTQRLINGEPAKADDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|408357423|ref|YP_006845954.1| thymidine kinase [Amphibacillus xylanus NBRC 15112]
gi|407728194|dbj|BAM48192.1| thymidine kinase [Amphibacillus xylanus NBRC 15112]
Length = 198
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 13/190 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I G MF+GK+ L+RRI+ N V K D RY ++I+TH+G + +
Sbjct: 4 GSIELICGSMFSGKSEELIRRIRRAKYGKLNTVVFKPAIDNRYSEEAIMTHNGNSIKAYS 63
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T+LS +K ++DV+GIDE QFFE ++ D + AD G VI+AGLD ++
Sbjct: 64 VTSLSELVEKLSP----EIDVVGIDEVQFFEKEIVDLVSQLADL-GFRVILAGLDTNFRG 118
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYMPV 250
FG + +++ L++SVTKL A C CG A T R ++ IG S+ Y P
Sbjct: 119 EPFGFMPELMALSESVTKLNAICPKCGADASRTQRLIDQKPAHYDDPIIKIGASESYEPR 178
Query: 251 CRQ-HYVSGQ 259
CR+ H V G+
Sbjct: 179 CRKCHEVPGK 188
>gi|404486485|ref|ZP_11021675.1| thymidine kinase [Barnesiella intestinihominis YIT 11860]
gi|404336303|gb|EJZ62764.1| thymidine kinase [Barnesiella intestinihominis YIT 11860]
Length = 200
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY ++IV+HD +
Sbjct: 14 GSIEVICGSMFSGKTEELIRRLKRAKIARQRVEIFKPAIDVRYSEENIVSHDSTSILSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S VDV+GIDEAQFF E + + C E A+ +G VIVAGLD D+ R
Sbjct: 74 VDNSHSILLMASG-----VDVVGIDEAQFFDEGIVEVCSELAN-NGTRVIVAGLDMDFRR 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD V K+ A C CG A ++ R + K L+G + Y P+CR+ Y+
Sbjct: 128 VPFGPMPSLLSIADDVYKVHAICVKCGHLANYSYRLVDNDKRVLLGEKNEYQPLCRRCYL 187
>gi|332878274|ref|ZP_08446000.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683725|gb|EGJ56596.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 201
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 62 LQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG 121
L+N N+H+ V G I VI G MF+GKT L+RR++ + V + K + DTRY
Sbjct: 3 LEN-NIHNHEEV----GWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYD 57
Query: 122 LDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADH 180
+IV+H+ ++P + +S D DV+GIDEAQFF+D + + C + A+
Sbjct: 58 DTNIVSHNATEIPSTPVEAAASILL-----LADGCDVVGIDEAQFFDDEIVNVCNDLANR 112
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL 240
G VIVAGLD DY FG + ++ A+ VTK+ A C G A ++ RK +
Sbjct: 113 -GVRVIVAGLDMDYKGNPFGPMPYLMATAEYVTKVHAVCTRTGHLANYSFRKVPNDSQRM 171
Query: 241 IGGSDIYMPVCRQHYVSGQVVVEAAR 266
+G S+ Y P+ R ++ + EA +
Sbjct: 172 LGESESYEPLSRAAFIKARAKDEAQK 197
>gi|415883778|ref|ZP_11545807.1| thymidine kinase [Bacillus methanolicus MGA3]
gi|387591573|gb|EIJ83890.1| thymidine kinase [Bacillus methanolicus MGA3]
Length = 192
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG I VI G MF+GK+ L+RR++ + +AV K D RY ++V+H+G
Sbjct: 3 VMKQSGWIEVICGSMFSGKSEELIRRVRRTLFAKQKIAVFKPKMDNRYSEAAVVSHNGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
++ + Q S +VDVI IDE QFF+ ++ D ++ A+ G VIVAGLD
Sbjct: 63 FTATPISHSTEIFQHIDS----EVDVIAIDEVQFFDSEIVDVLQQLAN-SGYRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG + I+ +A+ VTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGEMPKIMAIAEQVTKLQAVCAVCGSPASRTQRLINGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|451344486|ref|ZP_21913543.1| hypothetical protein HMPREF9943_01768 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449336764|gb|EMD15935.1| hypothetical protein HMPREF9943_01768 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 202
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MFAGKT L+RRI T +N+ V K D RY IV+H G K+ C
Sbjct: 7 EGWLEVICGCMFAGKTEELIRRINVLTFAKKNIIVFKPKVDDRYSTTEIVSHAGAKVSCV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S + D DV+ IDE QFF+ D+ D C AD G V+VAGLD D+
Sbjct: 67 VVEKSSDILNRIKVDT----DVVAIDEVQFFDKDIVDVCEYLADS-GLRVMVAGLDKDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG + D++ A+ VTKLTA C CG A T R L+G + Y P
Sbjct: 122 GEPFGVLPDLLTRAEFVTKLTAVCAKCGAPATRTQRMVNGKPASFTDPVVLVGAKEAYEP 181
Query: 250 VCRQHYVSG 258
CR + G
Sbjct: 182 RCRHCHEVG 190
>gi|317481221|ref|ZP_07940292.1| thymidine kinase [Bacteroides sp. 4_1_36]
gi|316902554|gb|EFV24437.1| thymidine kinase [Bacteroides sp. 4_1_36]
Length = 213
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 9/199 (4%)
Query: 60 FSLQNRNLHSEASVSSPS--GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKD 117
+L++ L SE + G I VI G MF+GKT L+RR++ + V + K D
Sbjct: 8 ITLESMVLFSEDHIQETKRRGRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAID 67
Query: 118 TRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCRE 176
TRY +V+HD + + + +S F S ++DV+GIDEAQFF+ L D C +
Sbjct: 68 TRYSEADVVSHDSHSIASTPIDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQ 122
Query: 177 AADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET 236
A+ +G VIVAGLD D+ FG + + +AD V+K+ A C CG+ A F+ R +
Sbjct: 123 LAN-NGIRVIVAGLDMDFRGIPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKND 181
Query: 237 KTELIGGSDIYMPVCRQHY 255
K L+G ++ Y P+CR+ Y
Sbjct: 182 KQVLLGETEEYEPLCRECY 200
>gi|218129151|ref|ZP_03457955.1| hypothetical protein BACEGG_00726 [Bacteroides eggerthii DSM 20697]
gi|217988670|gb|EEC54989.1| thymidine kinase [Bacteroides eggerthii DSM 20697]
Length = 202
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSHTISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF E L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDEGLIDVCNQLAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
Query: 257 SG 258
Sbjct: 190 QA 191
>gi|212640541|ref|YP_002317061.1| thymidine kinase [Anoxybacillus flavithermus WK1]
gi|226729733|sp|B7GMH4.1|KITH_ANOFW RecName: Full=Thymidine kinase
gi|212562021|gb|ACJ35076.1| Thymidine kinase [Anoxybacillus flavithermus WK1]
Length = 206
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ + V V K D RY +++V+H+G +
Sbjct: 7 SGWLEVICGSMFSGKSEELIRRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTSVIAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++ S R+ + DV+ IDE QFF E + D ++ AD +G VIVAGLD D+
Sbjct: 67 PVSCASDIRKHITT----HTDVVAIDEVQFFDEHVVDVVQQLAD-EGYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+SVTKL A C CG A T R LIG S+ Y P
Sbjct: 122 GEPFGPVPTLMSIAESVTKLQAVCTVCGSPASRTQRLINGRPASYYDPVILIGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|345519750|ref|ZP_08799163.1| thymidine kinase [Bacteroides sp. 4_3_47FAA]
gi|423312605|ref|ZP_17290542.1| thymidine kinase [Bacteroides vulgatus CL09T03C04]
gi|345457095|gb|EET16432.2| thymidine kinase [Bacteroides sp. 4_3_47FAA]
gi|392687339|gb|EIY80632.1| thymidine kinase [Bacteroides vulgatus CL09T03C04]
Length = 175
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 97/173 (56%), Gaps = 7/173 (4%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR++ + V + K DTRY + +V+HD + + + +S
Sbjct: 1 MFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNSIASTPIDSSASILL 60
Query: 147 KFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
F SD DV+GIDEAQFF E L D C + AD+ G VIVAGLD D+ R FG + +
Sbjct: 61 -FSSDK----DVVGIDEAQFFDEGLVDVCNKLADN-GIRVIVAGLDMDFRRVPFGPIPAL 114
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSG 258
+ +AD VTK+ A C CG A+ T R T+ K L+G Y P+CR Y+
Sbjct: 115 LAIADEVTKVHAICVKCGNLAYATHRITKSEKRVLLGEKADYEPLCRTCYMEA 167
>gi|329957471|ref|ZP_08297946.1| thymidine kinase [Bacteroides clarus YIT 12056]
gi|328522348|gb|EGF49457.1| thymidine kinase [Bacteroides clarus YIT 12056]
Length = 201
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSHTISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF E L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDEGLIDVCNQLAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
Query: 257 SG 258
Sbjct: 190 QA 191
>gi|145342503|ref|XP_001416221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576446|gb|ABO94514.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 196
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 103/184 (55%), Gaps = 13/184 (7%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDT-RYG---LDSIVTHDGVKLP-------- 134
MFAGKTT L+R ++ E +GR V VIKS D R+G D+++ HDG ++
Sbjct: 1 MFAGKTTHLMRCVERERARGRTVFVIKSELDVERFGEDARDALIAHDGKRVRFDASDDGG 60
Query: 135 -CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
A+ TL + + A D DV+ +DEAQF DL F R A+ G+TV V GLDGD
Sbjct: 61 RVRAVRTLDAAGLGADAAACDAADVVAVDEAQFMGDLAPFARRCAEELGQTVYVCGLDGD 120
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y R FG V+D+IPL D+VT+L C CG + F+ R +GG D Y PVCR
Sbjct: 121 YRRERFGGVLDLIPLCDTVTRLRGTCAECGDESLFSRRVEASEDVVRVGGRDKYAPVCRA 180
Query: 254 HYVS 257
YV+
Sbjct: 181 CYVA 184
>gi|88803789|ref|ZP_01119312.1| thymidine kinase [Polaribacter irgensii 23-P]
gi|88780317|gb|EAR11499.1| thymidine kinase [Polaribacter irgensii 23-P]
Length = 211
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + DTRY D++V+H+ K+
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPSLDTRYDADAVVSHNDNKIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S+ R + VDV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPVSSNIRL-----LVNDVDVVGIDEAQFFDDEIVAVCNDLAN-SGIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A ++ RK + K ++G ++ Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTHTGNLAHYSFRKAQNDKIVMLGETEEYEPLSRAAY 186
>gi|365122767|ref|ZP_09339665.1| thymidine kinase [Tannerella sp. 6_1_58FAA_CT1]
gi|363641752|gb|EHL81129.1| thymidine kinase [Tannerella sp. 6_1_58FAA_CT1]
Length = 194
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 14/198 (7%)
Query: 59 LFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDT 118
LFS +N H G I VI G MF+GKT L+RR++ + V + K + D
Sbjct: 2 LFSEENYETHKR-------GRIEVICGSMFSGKTEELIRRLKRAKIARQKVEIFKPSIDI 54
Query: 119 RYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREA 177
RY + IV+HD + + + +S VDV+GIDEAQFF+ + D C +
Sbjct: 55 RYSEEEIVSHDSNSIQSTPVDSSASILLLSSG-----VDVVGIDEAQFFDQGIVDICNQL 109
Query: 178 ADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETK 237
AD G VIVAGLD D+ + FG + ++ +AD VTK+ A C CG A ++ R + K
Sbjct: 110 ADQ-GTRVIVAGLDMDFKKVPFGPMPYLLSIADEVTKVHAICVECGHLANYSHRLIDNDK 168
Query: 238 TELIGGSDIYMPVCRQHY 255
L+G Y P+CR Y
Sbjct: 169 RVLLGEKGEYQPLCRTCY 186
>gi|167753962|ref|ZP_02426089.1| hypothetical protein ALIPUT_02247 [Alistipes putredinis DSM 17216]
gi|167658587|gb|EDS02717.1| thymidine kinase [Alistipes putredinis DSM 17216]
Length = 191
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 7/181 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S G I VI G MF+GKT L+RR++ V + K D RY + +V+HD +
Sbjct: 6 ASQKGWIEVICGSMFSGKTEELIRRLKRAEFARLRVEIFKPRIDVRYSEEEVVSHDASAI 65
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDG 192
+ + + SD VDV+GIDEAQFF+ L + CR+ AD G VIVAGLD
Sbjct: 66 RSTPVDSAQNI-LLMTSD----VDVVGIDEAQFFDQGLVEVCRQLAD-SGVRVIVAGLDM 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+ + FG + ++ A+ VTK+ A C CG A + R T + K ++G D Y P+CR
Sbjct: 120 DFTGKPFGPMPALMATAEYVTKVHAICVRCGNLAHHSHRLTNDEKQVMLGAQDSYEPICR 179
Query: 253 Q 253
Sbjct: 180 H 180
>gi|315225581|ref|ZP_07867390.1| thymidine kinase [Capnocytophaga ochracea F0287]
gi|314944398|gb|EFS96438.1| thymidine kinase [Capnocytophaga ochracea F0287]
Length = 198
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K + DTRY +IV
Sbjct: 4 LENTVNNNEKAGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIV 63
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + +S D DV+GIDEAQFF+D + C E A+ G V
Sbjct: 64 SHNANEIPSTPVEAAASIML-----LADGCDVVGIDEAQFFDDEIVHVCNELANR-GVRV 117
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY + FG + ++ A+ VTK+ A C G A ++ RK + L+G +D
Sbjct: 118 IVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVSNDQQRLLGEAD 177
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 178 SYEPLSRAAF 187
>gi|420159162|ref|ZP_14665969.1| thymidine kinase [Capnocytophaga ochracea str. Holt 25]
gi|394762460|gb|EJF44679.1| thymidine kinase [Capnocytophaga ochracea str. Holt 25]
Length = 197
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K + DTRY +IV
Sbjct: 3 LENTVNNNEKAGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + +S D DV+GIDEAQFF+D + C E A+ G V
Sbjct: 63 SHNANEIPSTPVEAAASIML-----LADGCDVVGIDEAQFFDDEIVHVCNELANR-GVRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY + FG + ++ A+ VTK+ A C G A ++ RK + L+G +D
Sbjct: 117 IVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVSNDQQRLLGEAD 176
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 177 SYEPLSRAAF 186
>gi|383812167|ref|ZP_09967609.1| thymidine kinase [Prevotella sp. oral taxon 306 str. F0472]
gi|383355166|gb|EID32708.1| thymidine kinase [Prevotella sp. oral taxon 306 str. F0472]
Length = 200
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+HD + A
Sbjct: 15 GRIEVICGSMFSGKTEELIRRMRRAQFAKQRVEIFKPSIDTRYSEEDVVSHDQNSIHSTA 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + SD +DV+GIDEAQF E L D C + A++ G VI+AGLD DY
Sbjct: 75 IDSSGNILL-LASD----IDVVGIDEAQFLDEGLVDVCNQLANN-GIRVIIAGLDMDYKG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R T +T+ ++G Y P+CR Y
Sbjct: 129 VPFGPMPALCAIADDVTKVHAICVKCGALAYVSHRLTADTRRVMLGEQQEYEPLCRDCY 187
>gi|429756489|ref|ZP_19289081.1| thymidine kinase [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171230|gb|EKY12864.1| thymidine kinase [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 198
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K + DTRY +IV
Sbjct: 4 LENTVNNNEKTGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIV 63
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + +S D DV+GIDEAQFF+D + C E A+ G V
Sbjct: 64 SHNANEIPSTPVEAAASIML-----LADGCDVVGIDEAQFFDDEIVHVCNELANR-GVRV 117
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY + FG + ++ A+ VTK+ A C G A ++ RK + L+G +D
Sbjct: 118 IVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVSNDQQRLLGEAD 177
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 178 SYEPLSRAAF 187
>gi|169351468|ref|ZP_02868406.1| hypothetical protein CLOSPI_02248 [Clostridium spiroforme DSM 1552]
gi|169291690|gb|EDS73823.1| thymidine kinase [Clostridium spiroforme DSM 1552]
Length = 196
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MF+GKT L+RRI + +N+ V K D RY IV+H G ++PC
Sbjct: 7 GGWLEVICGCMFSGKTEELIRRINVLSYAKKNIVVFKPKVDNRYSDTEIVSHSGSRVPC- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ Q D V+V+ IDE QFF+ D+ D C AD G VIVAGLD D+
Sbjct: 66 ---KIVEKAQDILKLVNDDVEVVAIDEIQFFDKDIVDVCEYLADK-GIRVIVAGLDKDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
SFG + +++ A+ VTKLTA C CG A T R + E LIG + Y P
Sbjct: 122 GESFGVMPELLTRAEFVTKLTAVCAKCGAPATRTQRLVDGKPASFEDPVVLIGAVEHYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|256820157|ref|YP_003141436.1| thymidine kinase [Capnocytophaga ochracea DSM 7271]
gi|256581740|gb|ACU92875.1| Thymidine kinase [Capnocytophaga ochracea DSM 7271]
Length = 197
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K + DTRY +IV
Sbjct: 3 LENTVNNNEKTGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + +S D DV+GIDEAQFF+D + C E A+ G V
Sbjct: 63 SHNANEIPSTPVEAAASIML-----LADGCDVVGIDEAQFFDDEIVHVCNELANR-GVRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY + FG + ++ A+ VTK+ A C G A ++ RK + L+G +D
Sbjct: 117 IVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVSNDQQRLLGEAD 176
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 177 SYEPLSRAAF 186
>gi|52082240|ref|YP_081031.1| thymidine kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404491125|ref|YP_006715231.1| thymidine kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423684251|ref|ZP_17659090.1| thymidine kinase [Bacillus licheniformis WX-02]
gi|73920098|sp|Q65DU6.1|KITH_BACLD RecName: Full=Thymidine kinase
gi|52005451|gb|AAU25393.1| thymidine kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52350134|gb|AAU42768.1| thymidine kinase Tdk [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|383441025|gb|EID48800.1| thymidine kinase [Bacillus licheniformis WX-02]
Length = 194
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RRI+ T + V V K D RY +S+V+H+G + C
Sbjct: 7 SGWLELICGSMFSGKSEELIRRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIVCH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ + Q + DVIG+DE QFF++ + G VI AGLD D+
Sbjct: 67 AIASPEEIFQYISK----ETDVIGVDEVQFFDETIVGTLTSLADQGYRVIAAGLDLDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG V D++ LA++VTKL A C CG A T R + + L+G S+ Y
Sbjct: 123 EPFGVVPDLMALAETVTKLQAVCSVCGSPASRTQRLINGKPASYDDPVILVGASEAYEAR 182
Query: 251 CRQHY 255
CR H+
Sbjct: 183 CRHHH 187
>gi|188994886|ref|YP_001929138.1| thymidine kinase [Porphyromonas gingivalis ATCC 33277]
gi|238691479|sp|B2RJJ6.1|KITH_PORG3 RecName: Full=Thymidine kinase
gi|188594566|dbj|BAG33541.1| putative thymidine kinase [Porphyromonas gingivalis ATCC 33277]
Length = 204
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT LLRR++ + V + K D RY +V+HD +
Sbjct: 16 GSIEVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASAP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ QVDV+GIDEAQFF E L + ++ AD G V++AGLD D+ R
Sbjct: 76 VDNSANILL-----LSSQVDVVGIDEAQFFDEGLVEVAQQLADQ-GVRVVIAGLDMDFRR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + + +ADSVTK+ A C CG+ A ++ R+ + + ++G + Y P+CR Y
Sbjct: 130 QPFGPMPGLCAIADSVTKVHAVCVECGRLASYSFRRVQGDQQVMLGELNEYSPLCRTCY 188
>gi|160889920|ref|ZP_02070923.1| hypothetical protein BACUNI_02353 [Bacteroides uniformis ATCC 8492]
gi|270294582|ref|ZP_06200784.1| thymidine kinase [Bacteroides sp. D20]
gi|156860308|gb|EDO53739.1| thymidine kinase [Bacteroides uniformis ATCC 8492]
gi|270276049|gb|EFA21909.1| thymidine kinase [Bacteroides sp. D20]
Length = 201
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G ++ Y P+CR+ Y
Sbjct: 130 IPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETEEYEPLCRECY 188
>gi|315499297|ref|YP_004088101.1| thymidine kinase [Asticcacaulis excentricus CB 48]
gi|315417309|gb|ADU13950.1| Thymidine kinase [Asticcacaulis excentricus CB 48]
Length = 200
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRI-QAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI GPMFAGKTT LL+RI A + ++V V+K+ D RY ++THDG+
Sbjct: 3 GRLTVICGPMFAGKTTELLKRILWARNGERKDVLVLKTAFDVRYSRTEVITHDGLAAEAV 62
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE----DLYDFCREAADHDGKTVIVAGLDG 192
L S + + D++ DE QFF+ D+ + R+ G V+ AGLD
Sbjct: 63 VLHAFSDVEARL-----QEADLVCFDEVQFFQNMDRDVVELIRDLL-ASGTDVVAAGLDT 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
++ +F + ++ +AD V KL A C CG+ A T +K E+ +G D+Y P C
Sbjct: 117 NWKGEAFAATGLLMAMADEVVKLKAHCAVCGQPAHKTFKKVEDNVEIQLGHGDLYEPRCN 176
Query: 253 QHY 255
+H+
Sbjct: 177 RHW 179
>gi|319648114|ref|ZP_08002331.1| thymidine kinase [Bacillus sp. BT1B_CT2]
gi|317389749|gb|EFV70559.1| thymidine kinase [Bacillus sp. BT1B_CT2]
Length = 194
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RRI+ T + V V K D RY +S+V+H+G + C
Sbjct: 7 SGWLELICGSMFSGKSEELIRRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIVCH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ + Q + DVIG+DE QFF++ + G VI AGLD D+
Sbjct: 67 AIASPEEIFQYISK----ETDVIGVDEVQFFDETIVGTLTSLADQGYRVIAAGLDLDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG V D++ LA++VTKL A C CG A T R + + L+G S+ Y
Sbjct: 123 EPFGVVPDLMALAETVTKLQAVCSVCGSPASRTQRLINGKPASYDDPVILVGASEAYEAR 182
Query: 251 CRQHY 255
CR H+
Sbjct: 183 CRHHH 187
>gi|167762105|ref|ZP_02434232.1| hypothetical protein BACSTE_00456 [Bacteroides stercoris ATCC
43183]
gi|167700064|gb|EDS16643.1| thymidine kinase [Bacteroides stercoris ATCC 43183]
Length = 201
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSNIISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF E L D C + A++ G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDEGLIDVCNQLANN-GIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
>gi|423305159|ref|ZP_17283158.1| thymidine kinase [Bacteroides uniformis CL03T00C23]
gi|423310981|ref|ZP_17288950.1| thymidine kinase [Bacteroides uniformis CL03T12C37]
gi|392680013|gb|EIY73387.1| thymidine kinase [Bacteroides uniformis CL03T12C37]
gi|392682226|gb|EIY75573.1| thymidine kinase [Bacteroides uniformis CL03T00C23]
Length = 201
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G ++ Y P+CR+ Y
Sbjct: 130 IPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETEEYEPLCRECY 188
>gi|402846950|ref|ZP_10895259.1| putative thymidine kinase [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402267642|gb|EJU17037.1| putative thymidine kinase [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 196
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT LLRR++ G V + K + DTRY +V+HD +
Sbjct: 14 GSIEVICGSMFSGKTEELLRRLRRAKIAGLRVEIFKPSVDTRYDETEVVSHDRNAIASTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S+ SD VDVIGIDEAQFF E L + + AD G +I+AGLD D+ R
Sbjct: 74 IDNSSNLL-LLASD----VDVIGIDEAQFFDEHLPEVVEQLADQ-GIRIILAGLDMDFRR 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + + +ADSV K+ A C CG A ++ R + ++G + Y P+CR Y+
Sbjct: 128 QPFGPMAQLCAIADSVDKIHAICVGCGSWANYSYRLVSGEQQVMLGEAKEYSPLCRTCYL 187
>gi|323490901|ref|ZP_08096096.1| thymidine kinase [Planococcus donghaensis MPA1U2]
gi|323395381|gb|EGA88232.1| thymidine kinase [Planococcus donghaensis MPA1U2]
gi|456013728|gb|EMF47365.1| Thymidine kinase [Planococcus halocryophilus Or1]
Length = 197
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 18/193 (9%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG-- 130
V +G + +I G MF+GK+ L+RR++ + +AV K D RY +++V+H+G
Sbjct: 3 VMKQTGWVELICGSMFSGKSEELIRRVRRSQFAKQKIAVFKPKIDDRYSKEAVVSHNGAT 62
Query: 131 -VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVA 188
+ LP + + + D+ DVI IDEAQFF E + + ++ A+H G VIVA
Sbjct: 63 VIALPISRSSEMWDY-------ITDEFDVIAIDEAQFFDEAIIENVQKLANH-GFRVIVA 114
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD D+ R FG + ++ +A+ VTKL A C CG A T R + + T L+G
Sbjct: 115 GLDQDFRGRPFGPMPALLAIAEQVTKLQAVCTVCGSPASRTQRLIDGKPAGSDDPTILVG 174
Query: 243 GSDIYMPVCRQHY 255
S+ Y P CR H+
Sbjct: 175 ASEAYEPRCRHHH 187
>gi|345023586|ref|ZP_08787199.1| thymidine kinase [Ornithinibacillus scapharcae TW25]
Length = 206
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ T + V V K D RY ++V+H+G +
Sbjct: 7 SGWLEVICGSMFSGKSEELIRRVRRATYANQKVQVFKPAIDNRYDDVAVVSHNGTSVMAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + ++ + V+++GIDEAQFF ED+ + AD G VI AGLD D+
Sbjct: 67 PVDSSANILENL----LPNVEIVGIDEAQFFDEDIIYVAEQLADR-GIRVIAAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG + +++ LA+SVTKL A C CG A T R L+G S+ Y P
Sbjct: 122 GEPFGPMPELMALAESVTKLNAICPLCGSPASRTQRLINGQPASYNDPIILVGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|429748009|ref|ZP_19281236.1| thymidine kinase [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429161726|gb|EKY04103.1| thymidine kinase [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 198
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K + DTRY +IV
Sbjct: 4 LENTVNDNEKTGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIV 63
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + +S D DV+GIDEAQFF+D + C E A+ G V
Sbjct: 64 SHNANEIPSTPVEAAASIML-----LADGCDVVGIDEAQFFDDEIVHVCNELANR-GVRV 117
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY + FG + ++ A+ VTK+ A C G A ++ RK + L+G +D
Sbjct: 118 IVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVSNDQQRLLGEAD 177
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 178 SYEPLSRAAF 187
>gi|34540682|ref|NP_905161.1| thymidine kinase [Porphyromonas gingivalis W83]
gi|334146648|ref|YP_004509576.1| thymidine kinase [Porphyromonas gingivalis TDC60]
gi|419971532|ref|ZP_14486972.1| thymidine kinase [Porphyromonas gingivalis W50]
gi|60390062|sp|Q7MVV7.1|KITH_PORGI RecName: Full=Thymidine kinase
gi|34396996|gb|AAQ66060.1| thymidine kinase [Porphyromonas gingivalis W83]
gi|333803803|dbj|BAK25010.1| thymidine kinase [Porphyromonas gingivalis TDC60]
gi|392608191|gb|EIW91049.1| thymidine kinase [Porphyromonas gingivalis W50]
Length = 204
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT LLRR++ + V + K D RY +V+HD +
Sbjct: 16 GSIEVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ QVDV+GIDEAQFF E L + ++ AD G V++AGLD D+ R
Sbjct: 76 VDNSANILL-----LSSQVDVVGIDEAQFFDEGLVEVAQQLADQ-GVRVVIAGLDMDFRR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + + +ADSVTK+ A C CG+ A ++ R+ + + ++G + Y P+CR Y
Sbjct: 130 QPFGPMPGLCAIADSVTKVHAVCVECGRLASYSFRRVQGDQQVMLGELNEYSPLCRTCY 188
>gi|393778948|ref|ZP_10367205.1| thymidine kinase [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|420149834|ref|ZP_14657002.1| thymidine kinase [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|392611130|gb|EIW93880.1| thymidine kinase [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|394753031|gb|EJF36636.1| thymidine kinase [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 197
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + +G I VI G MF+GKT L+RR++ + V + K + DTRY +IV
Sbjct: 3 LENTVNDNEKTGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ ++P + +S D DV+GIDEAQFF+D + C E A+ G V
Sbjct: 63 SHNANEIPSTPVEAAASIML-----LADGCDVVGIDEAQFFDDEIVHVCNELANR-GVRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD DY + FG + ++ A+ VTK+ A C G A ++ RK + L+G +D
Sbjct: 117 IVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTRTGNLANYSFRKVSNDQQRLLGEAD 176
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 177 SYEPLSRAAF 186
>gi|239828608|ref|YP_002951232.1| thymidine kinase [Geobacillus sp. WCH70]
gi|259494453|sp|C5D9N8.1|KITH_GEOSW RecName: Full=Thymidine kinase
gi|239808901|gb|ACS25966.1| Thymidine kinase [Geobacillus sp. WCH70]
Length = 205
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ T + V V K D RY +++V+H+G L
Sbjct: 7 SGWLEVICGSMFSGKSEELIRRVRRATFAKQEVKVFKPTIDNRYSDEAVVSHNGNSLIAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+++ + ++ DVI IDE QFF +D+ D + AD G VIVAGLD D+
Sbjct: 67 PVSSPKEIFEHIS----EKTDVIAIDEVQFFSDDIIDVVQTLADR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+SVTKL A C CG A T R L+G S+ Y P
Sbjct: 122 GEPFGPVPTLMAIAESVTKLQAVCTVCGSPASRTQRLINGVPASYYDPVILVGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|403667965|ref|ZP_10933262.1| thymidine kinase [Kurthia sp. JC8E]
Length = 200
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + +G I VI G MF+GK+ L+RR++ + +AV K D RY +++V+H+G
Sbjct: 3 VMTQNGWIEVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPKIDNRYSEEAVVSHNGTT 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + ++ S D+ DVI IDEAQFF +D+ + ++ ADH G VI+AGLD
Sbjct: 63 VIAHPIEKA----EEMWSYIDDEYDVIAIDEAQFFGQDIIEAVQKLADH-GYRVILAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSD 245
D+ FG + ++ +A+ VTKL A C CG A T R E K + L+G S+
Sbjct: 118 QDFKGVPFGPMPYLMAIAEQVTKLQAVCSECGSPASRTQRLINGEPAKADDPIILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|297543673|ref|YP_003675975.1| Thymidine kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841448|gb|ADH59964.1| Thymidine kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 193
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDNRYSIDKVVSHNGTNINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLY-DFCREAADHDGKTVIVAGLDGDYLR 196
+ S + D DVI IDE QFF+ L D RE AD GK VI AGLD D+
Sbjct: 69 VVKASEIIEHLEEDT----DVIAIDEIQFFDHLLVDVVREIADL-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
FG D++ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGPTPDVMAIAESVDKLTAICVKCGNPATRTQRLINGKPARYDDPIILVGAYETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>gi|397691452|ref|YP_006528706.1| Thymidine kinase [Melioribacter roseus P3M]
gi|395812944|gb|AFN75693.1| Thymidine kinase [Melioribacter roseus P3M]
Length = 189
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT L+RR++ + V + K DTRY IV+H+ LP
Sbjct: 12 AGWIEVIAGCMFSGKTEELIRRLKRAIIAKQKVKIFKPKIDTRYSETEIVSHNEQSLPSI 71
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + G VIGIDEAQFF+ L D C + AD +GK VIVAGLD DY
Sbjct: 72 LIDKAEDILELAGD-----AQVIGIDEAQFFDLKLVDVCNKLAD-EGKRVIVAGLDQDYR 125
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ-H 254
F + ++ A+ +TK A C CG A T RK + L+G SD Y CR+ H
Sbjct: 126 GEPFEPIPQLLATAEFITKTLAICVVCGNIADRTQRKIVSHERVLVGASDSYEARCRKCH 185
Query: 255 YV 256
Y+
Sbjct: 186 YI 187
>gi|312131923|ref|YP_003999263.1| thymidine kinase [Leadbetterella byssophila DSM 17132]
gi|311908469|gb|ADQ18910.1| Thymidine kinase [Leadbetterella byssophila DSM 17132]
Length = 198
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT L+RR+ NV + K D RY + IV+H+ +
Sbjct: 15 TGWIEVISGSMFSGKTEELIRRLNRARIANLNVEIFKPGIDVRYDEEDIVSHNKNSIRST 74
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ GS DV+GIDEAQFF+D L D + AD GK VI+AGLD D
Sbjct: 75 PVNMAEEILLYSGS-----CDVVGIDEAQFFDDALVDVVNKLADA-GKRVILAGLDMDSN 128
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ +A+ VTK+ A C CG+ A ++ RK+ L+G D+Y CR Y
Sbjct: 129 GVPFGPMPHLMAVAEYVTKVHAICVNCGEIAHYSFRKSASESQILLGEHDVYEARCRSCY 188
Query: 256 VSGQVV 261
+ GQ +
Sbjct: 189 LEGQKI 194
>gi|284040003|ref|YP_003389933.1| thymidine kinase [Spirosoma linguale DSM 74]
gi|283819296|gb|ADB41134.1| Thymidine kinase [Spirosoma linguale DSM 74]
Length = 209
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 7/184 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT L+RR+ NV ++K DTRY ++IV+H + +
Sbjct: 16 TGWIEVICGSMFSGKTEELIRRLTRAQIAKLNVKIVKPALDTRYHDENIVSHSSITISSV 75
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ T G+ DV+GIDEAQFF +D+ + C + A+ GK VIVAGLD D+
Sbjct: 76 PVQTAGQILALAGN-----CDVVGIDEAQFFDQDITNVCTQLANQ-GKRVIVAGLDMDFA 129
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++ +A+ VTK+ A C CG A ++ R + L+G +D Y CR+ +
Sbjct: 130 GKPFGCMPQLLSIAEYVTKVHAICVVCGDIAQYSYRLVPSKERVLLGETDSYEARCRRCF 189
Query: 256 VSGQ 259
G
Sbjct: 190 NLGN 193
>gi|329961810|ref|ZP_08299824.1| thymidine kinase [Bacteroides fluxus YIT 12057]
gi|328531250|gb|EGF58094.1| thymidine kinase [Bacteroides fluxus YIT 12057]
Length = 201
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSDADVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGVRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G ++ Y P+CR+ Y
Sbjct: 130 IPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETEEYEPLCRECY 188
>gi|225010283|ref|ZP_03700755.1| Thymidine kinase [Flavobacteria bacterium MS024-3C]
gi|225005762|gb|EEG43712.1| Thymidine kinase [Flavobacteria bacterium MS024-3C]
Length = 228
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + P G I VI G MF+GKT L+RR++ + + + K DTRY + +V
Sbjct: 3 LENTVNHEEPFGWIEVICGSMFSGKTEELIRRLKRAQFAKQRIEIFKPQIDTRYHDEMVV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTV 185
+HD ++ + ++ R DQ DV+GIDEAQFF+ ++ C + A+ GK V
Sbjct: 63 SHDENQIRSTPVPAAANIRI-----LADQCDVVGIDEAQFFDAEIIHVCNDLANK-GKRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD D+ FG + ++ A+ VTK+ A C G A ++ RK+ K L+G +
Sbjct: 117 IVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKSANEKLVLLGETT 176
Query: 246 IYMPVCRQHY 255
Y P+ R Y
Sbjct: 177 EYEPLSRSAY 186
>gi|317475119|ref|ZP_07934387.1| thymidine kinase [Bacteroides eggerthii 1_2_48FAA]
gi|316908763|gb|EFV30449.1| thymidine kinase [Bacteroides eggerthii 1_2_48FAA]
Length = 202
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIYKPAIDTRYSEADVVSHDSHTISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF E L + C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASIL-LFTS----EIDVVGIDEAQFFDESLINVCNQLAN-NGIRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
Query: 257 SG 258
Sbjct: 190 QA 191
>gi|282879127|ref|ZP_06287886.1| thymidine kinase [Prevotella buccalis ATCC 35310]
gi|281298769|gb|EFA91179.1| thymidine kinase [Prevotella buccalis ATCC 35310]
Length = 206
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + + V + K DTRY +++V+HD A
Sbjct: 13 GRIEVICGSMFSGKTEELIRRMRRASFAKQRVEIFKPAIDTRYSEENVVSHDQH-----A 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + DV+GIDEAQFF+D L C E A+ G VI+AGLD D+
Sbjct: 68 IQSTPVDSSSSILLLSSDADVVGIDEAQFFDDGLVKVCNELANK-GVRVIIAGLDMDFQG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + + +AD VTK+ A C CG A+ + R + K L+G Y P+CR+ Y
Sbjct: 127 KPFGPIPGLCAIADEVTKVHAICVKCGALAYISHRLVQNDKRVLLGEKLTYEPLCRECY 185
>gi|403236589|ref|ZP_10915175.1| thymidine kinase [Bacillus sp. 10403023]
Length = 206
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ ++V V K D RY DS+V+H+G
Sbjct: 7 SGWLEVICGSMFSGKSEELIRRVRRTEFARQSVQVFKPQIDNRYSDDSVVSHNGASFVAK 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ T + + +D DV+ IDE QFF+D + + G VIVAGLD D+
Sbjct: 67 PVATSAEILEAVSADT----DVVAIDEVQFFDDEIVEVVQILANRGHRVIVAGLDQDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG V +++ LA+ VTKL A C CG + T R + + L+G S+ Y P
Sbjct: 123 EPFGKVPELLSLAELVTKLQAVCSVCGSPSSRTQRLINGQPASYDDPVILVGASESYEPR 182
Query: 251 CRQHY 255
CR H+
Sbjct: 183 CRHHH 187
>gi|373955881|ref|ZP_09615841.1| Thymidine kinase [Mucilaginibacter paludis DSM 18603]
gi|373892481|gb|EHQ28378.1| Thymidine kinase [Mucilaginibacter paludis DSM 18603]
Length = 192
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + +I G MF+GKT L+RR++ NV + K DTRY +++V+HD +
Sbjct: 17 GSVELICGSMFSGKTEELIRRLRRAQIARLNVEIFKPKTDTRYDENAVVSHDLNSIQSTP 76
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ SS GS+ V+GIDEAQFF+D L C + A+ G VIVAGLD D+L
Sbjct: 77 VENSSSILL-LGSNT----QVVGIDEAQFFDDELPSVCNKLANK-GIRVIVAGLDMDFLG 130
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + I+ +A+SVTK+ A C CG A ++ R L+G + Y P CR Y
Sbjct: 131 KPFGPMPAIMAIAESVTKVHAVCVRCGNPALYSYRLVSSDAKILLGEKETYEPRCRICY 189
>gi|336398971|ref|ZP_08579771.1| Thymidine kinase [Prevotella multisaccharivorax DSM 17128]
gi|336068707|gb|EGN57341.1| Thymidine kinase [Prevotella multisaccharivorax DSM 17128]
Length = 204
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ + V + K D RY +V+HD +
Sbjct: 13 GRIEVVCGSMFSGKTEELIRRLKRARIARQAVMIFKPAIDNRYSKVDVVSHDHNSILSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ SS + A DVIGIDEAQFF+D L C A H G VIVAGLD DYL
Sbjct: 73 IKDASSMLK-----AAQGYDVIGIDEAQFFDDSLIGVCNRLAYH-GMRVIVAGLDMDYLG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+ FG + ++ +AD VTK+ A C CG A+ + R + ++G + Y P+CR
Sbjct: 127 QPFGPMPQLLAIADEVTKVHAICVKCGSLAYASHRLVKSNAQVMLGEKEEYEPLCR 182
>gi|281421272|ref|ZP_06252271.1| thymidine kinase [Prevotella copri DSM 18205]
gi|281404807|gb|EFB35487.1| thymidine kinase [Prevotella copri DSM 18205]
Length = 194
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 13 GRIEVVCGSMFSGKTEELIRRMKRAKFAKQKVEIFKPALDTRYSEEDVVSHDQNSIRSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S SD +DV+GIDEAQF ++ L + C E A+ G VIVAGLD D+
Sbjct: 73 IESSGSILL-LASD----IDVVGIDEAQFLDNGLVEVCNELANR-GVRVIVAGLDMDFKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R K L+G D Y P+CR+ Y
Sbjct: 127 VPFGPIPALCAIADEVTKVHAICVKCGSVAYVSHRLVNNDKRVLLGEKDEYEPLCRECY 185
>gi|319901044|ref|YP_004160772.1| Thymidine kinase [Bacteroides helcogenes P 36-108]
gi|319416075|gb|ADV43186.1| Thymidine kinase [Bacteroides helcogenes P 36-108]
Length = 206
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSDEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF++ L + C + A+ +G VIVAGLD D+
Sbjct: 76 IDSSASI-LLFTS----EIDVVGIDEAQFFDNGLIEVCNQLAN-NGVRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y
Sbjct: 130 IPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECY 188
>gi|409198195|ref|ZP_11226858.1| thymidine kinase [Marinilabilia salmonicolor JCM 21150]
Length = 192
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L ++ S G I VI G MF+GKT LLRR++ + V + K D+RY D +V
Sbjct: 3 LENKVDKSEKRGWIEVIAGSMFSGKTEELLRRLRRAGIARQRVEIFKPMVDSRYSEDEVV 62
Query: 127 THDGVKLPCCALTT------LSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAAD 179
+HD + + + LSS VDV+GIDEAQFF+ +L C + A
Sbjct: 63 SHDSNSIRSTPVESSGNILLLSS-----------NVDVVGIDEAQFFDSNLLSVCNQLAG 111
Query: 180 HDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE 239
G VIVAGLD D+ FG + ++ A+ VTK+ A C CG A ++LRK++ K
Sbjct: 112 Q-GVRVIVAGLDMDFKGIPFGPMPALMASAEYVTKVHAICMRCGDLAQYSLRKSQSDKLV 170
Query: 240 LIGGSDIYMPVCRQHY 255
+G SD Y VCR Y
Sbjct: 171 ELGASDNYEAVCRACY 186
>gi|374374320|ref|ZP_09631979.1| Thymidine kinase [Niabella soli DSM 19437]
gi|373233762|gb|EHP53556.1| Thymidine kinase [Niabella soli DSM 19437]
Length = 189
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 7/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + K DTRY ++IV+HD +
Sbjct: 13 GWIEVICGSMFSGKTEELIRRLKRVQFANLKAEIFKPAIDTRYDEENIVSHDTSIIH--- 69
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T QK A DVIGIDEAQFF+ +L C + A + G VIVAGLD DY
Sbjct: 70 -STPVDNSQKILLLA-QGADVIGIDEAQFFDPELPGVCDQLA-YQGIRVIVAGLDMDYTG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + +I+ AD +TKL A C CG A ++ RK + + ++G D+Y P CR+ Y+
Sbjct: 127 KPFGPMPEILARADYITKLHAICVKCGNIANYSYRKIPDEEQVMLGAIDVYEPRCRKCYI 186
Query: 257 S 257
Sbjct: 187 D 187
>gi|410584322|ref|ZP_11321425.1| thymidine kinase [Thermaerobacter subterraneus DSM 13965]
gi|410504257|gb|EKP93768.1| thymidine kinase [Thermaerobacter subterraneus DSM 13965]
Length = 216
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GKT LLRR+Q R V + K + D RY D++ +HDG L
Sbjct: 2 AGYLEVITGGMFSGKTEELLRRVQRARIARRRVLLCKPDLDHRYRRDAVASHDGRDLEAV 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-----EDLYDFCREAADHDGKTVIVAGLD 191
+ + A +V+GIDEAQFF + + D AA G VIV+GLD
Sbjct: 62 VVPAGRPEEIPVLA-ARSAAEVVGIDEAQFFAPPIVQAVLDMV--AA---GLRVIVSGLD 115
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ RR FG + +++ LAD V KL A C CG+ A FT R + LIGG +
Sbjct: 116 MDFARRPFGPMPELMALADEVLKLKAICVVCGEPATFTQRLIGGRPAAPDDPVILIGGHE 175
Query: 246 IYMPVCRQHYVSGQ 259
Y P CR+H+ G+
Sbjct: 176 SYEPRCRRHHQLGE 189
>gi|404404711|ref|ZP_10996295.1| thymidine kinase [Alistipes sp. JC136]
Length = 189
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 7/181 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 6 ASRKGWIEVICGSMFSGKTEELIRRLKRAKFAHQRVEIFKPRIDVRYSEEEVVSHDANAI 65
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDG 192
+ + + SD VDV+GIDEAQFF+D + + CR A+ +G VIVAGLD
Sbjct: 66 RSTPVESPQNILL-MTSD----VDVVGIDEAQFFDDSIVEVCRRLAN-NGVRVIVAGLDM 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY + FG + ++ A+ VTK+ A C CG A + R T + K ++G +D Y +CR
Sbjct: 120 DYTGKPFGPMPHLMATAEYVTKVHAICVRCGNLAHHSHRLTSDEKLVVLGETDSYEAICR 179
Query: 253 Q 253
Sbjct: 180 H 180
>gi|269123520|ref|YP_003306097.1| thymidine kinase [Streptobacillus moniliformis DSM 12112]
gi|268314846|gb|ACZ01220.1| Thymidine kinase [Streptobacillus moniliformis DSM 12112]
Length = 358
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 111/202 (54%), Gaps = 10/202 (4%)
Query: 62 LQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG 121
+ N+ ++ S G++ VI G MF+GK+ L+RR++ E+ +NV + K + D RYG
Sbjct: 2 INNQKIYMFLKNSDNVGKLEVICGSMFSGKSEELIRRLRRESFTKQNVLIFKHSIDKRYG 61
Query: 122 LDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADH 180
+ I +H+ + ++ + + V+VIGIDE QFF +++ +FC + +
Sbjct: 62 ENGIFSHNQESIEAFPVSNVLEMENIISK--HPDVEVIGIDEVQFFGKEVIEFCNKYVNI 119
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTE 234
GK V+VAGLD D+ F + +++ ADS+TKL A C CGK A+ + R +
Sbjct: 120 -GKRVVVAGLDLDFKAEPFYPMPELLTYADSITKLKAICMVCGKEAYASQRLINGNPAFK 178
Query: 235 ETKTELIGGSDIYMPVCRQHYV 256
+ ++G S+ Y CR+H++
Sbjct: 179 DDPIVMVGASENYEARCRRHHI 200
>gi|255530714|ref|YP_003091086.1| thymidine kinase [Pedobacter heparinus DSM 2366]
gi|255343698|gb|ACU03024.1| Thymidine kinase [Pedobacter heparinus DSM 2366]
Length = 193
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT LLRR++ NV + K DTRY ++V+HD +
Sbjct: 15 GSIEVICGSMFSGKTEELLRRLKRAQIAKLNVEIFKPKTDTRYDETAVVSHDLNSIQSTP 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ G++ V+GIDEAQFF+D L + C + A G VIVAGLD D+
Sbjct: 75 VENSAAILL-LGAN----TQVVGIDEAQFFDDNLPEVCNKLA-QKGIRVIVAGLDMDFQG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG V ++ +A+ VTK+ A C CG A ++ R T L+G D Y P CR Y
Sbjct: 129 KPFGPVPALMAIAELVTKVNAVCVRCGSPAVYSYRTAASESTILLGEKDSYEPRCRHCYH 188
Query: 257 SGQV 260
G +
Sbjct: 189 LGDM 192
>gi|138896956|ref|YP_001127409.1| thymidine kinase [Geobacillus thermodenitrificans NG80-2]
gi|196249774|ref|ZP_03148470.1| Thymidine kinase [Geobacillus sp. G11MC16]
gi|166220765|sp|A4ITL0.1|KITH_GEOTN RecName: Full=Thymidine kinase
gi|134268469|gb|ABO68664.1| Thymidine kinase [Geobacillus thermodenitrificans NG80-2]
gi|196210650|gb|EDY05413.1| Thymidine kinase [Geobacillus sp. G11MC16]
Length = 207
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + VI G MF+GK+ L+RRI+ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLEVICGSMFSGKSEELIRRIRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAELFRYISA----TTDVVAIDEVQFFSDDIIDVVQTLADR-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ LA+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMALAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPIILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|398308677|ref|ZP_10512151.1| thymidine kinase [Bacillus mojavensis RO-H-1]
Length = 195
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY D++V+H+G +
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMTSY 66
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLD 191
A+T+ +D +D + DVI +DE QFF+ + D AD G VI AGLD
Sbjct: 67 AITS--------AADIWDHISESTDVIAVDEVQFFDRAIIDVLSALADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V DI+ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPDIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|294674536|ref|YP_003575152.1| thymidine kinase [Prevotella ruminicola 23]
gi|294472499|gb|ADE81888.1| thymidine kinase [Prevotella ruminicola 23]
Length = 200
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 13 GRIEVVCGSMFSGKTEELIRRMRRAQFARQKVEIFKPAIDVRYSEEDVVSHDQKHIQSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S SD +DV+GIDEAQFF+ + D C E A+ G VIVAGLD DY
Sbjct: 73 IDSPGSILL-LSSD----IDVVGIDEAQFFDMGIVDVCNELANR-GVRVIVAGLDMDYKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + RK + + L+G + Y P+CR+ Y
Sbjct: 127 VPFGPMPALCAIADDVTKVHAICVKCGNLAYVSHRKVQSEQRVLLGETTEYEPLCRECY 185
>gi|374854978|dbj|BAL57847.1| thymidine kinase [uncultured Bacteroidetes bacterium]
Length = 192
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
E + +G I VI G MF+GKT LLRR++ G+ V + K DTRY +IV+HD
Sbjct: 2 EPTFPPGTGWIEVICGGMFSGKTEELLRRVRRALLAGQRVRLFKPETDTRYHPTAIVSHD 61
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 189
L + S S+A+ VIGIDEAQFF+ ++GK VI+AG
Sbjct: 62 QTSLEAQPVPN-SDAIYLLSSEAH----VIGIDEAQFFDPGIVEVANRLANEGKRVIIAG 116
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LD DYL R FG + ++ +A+ VTKL A C + G A F+ RK E L GG ++Y P
Sbjct: 117 LDMDYLGRPFGPMPYLMAIAEFVTKLHAVCVYTGGLAHFSHRKKPEGDVVLPGGGELYEP 176
Query: 250 VCRQHYV 256
V RQ ++
Sbjct: 177 VSRQVFL 183
>gi|289577386|ref|YP_003476013.1| thymidine kinase [Thermoanaerobacter italicus Ab9]
gi|289527099|gb|ADD01451.1| Thymidine kinase [Thermoanaerobacter italicus Ab9]
Length = 193
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLY-DFCREAADHDGKTVIVAGLDGDYLR 196
+ S + D ++VI IDE QFF+ L D RE AD GK VI AGLD D+
Sbjct: 69 VVKASEIIEHLEHD----IEVIAIDEIQFFDHLLVDVVREIADL-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
FG D++ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGPTPDVMAIAESVDKLTAICVKCGNPATRTQRLINGKPARYDDPIILVGAYETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>gi|312112643|ref|YP_003990959.1| thymidine kinase [Geobacillus sp. Y4.1MC1]
gi|336237105|ref|YP_004589721.1| thymidine kinase [Geobacillus thermoglucosidasius C56-YS93]
gi|423721602|ref|ZP_17695784.1| thymidine kinase [Geobacillus thermoglucosidans TNO-09.020]
gi|311217744|gb|ADP76348.1| Thymidine kinase [Geobacillus sp. Y4.1MC1]
gi|335363960|gb|AEH49640.1| Thymidine kinase [Geobacillus thermoglucosidasius C56-YS93]
gi|383365405|gb|EID42701.1| thymidine kinase [Geobacillus thermoglucosidans TNO-09.020]
Length = 205
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ T ++V V K D RY +++V+H+G +
Sbjct: 7 SGWLEVICGSMFSGKSEELIRRVRRATFAKQDVKVFKPTIDNRYSEEAVVSHNGNSV--- 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S Q+ ++ DVI IDE QFF +D+ + + AD G VIVAGLD D+
Sbjct: 64 -IAIPVSSPQEIFEHISEKTDVIAIDEVQFFSDDIIEVVQTLADR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG V ++ +A+SVTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GEPFGPVPTLMAIAESVTKLQAVCTVCGSPASRTQRLINGVPASYHDPVILVGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|53711949|ref|YP_097941.1| thymidine kinase [Bacteroides fragilis YCH46]
gi|265765291|ref|ZP_06093566.1| thymidine kinase [Bacteroides sp. 2_1_16]
gi|336408161|ref|ZP_08588655.1| thymidine kinase [Bacteroides sp. 2_1_56FAA]
gi|375356994|ref|YP_005109766.1| putative thymidine kinase [Bacteroides fragilis 638R]
gi|383116907|ref|ZP_09937655.1| thymidine kinase [Bacteroides sp. 3_2_5]
gi|423248639|ref|ZP_17229655.1| thymidine kinase [Bacteroides fragilis CL03T00C08]
gi|423253589|ref|ZP_17234520.1| thymidine kinase [Bacteroides fragilis CL03T12C07]
gi|423259052|ref|ZP_17239975.1| thymidine kinase [Bacteroides fragilis CL07T00C01]
gi|423263977|ref|ZP_17242980.1| thymidine kinase [Bacteroides fragilis CL07T12C05]
gi|423269438|ref|ZP_17248410.1| thymidine kinase [Bacteroides fragilis CL05T00C42]
gi|423273003|ref|ZP_17251950.1| thymidine kinase [Bacteroides fragilis CL05T12C13]
gi|423282129|ref|ZP_17261014.1| thymidine kinase [Bacteroides fragilis HMW 615]
gi|60389934|sp|Q64YL9.1|KITH_BACFR RecName: Full=Thymidine kinase
gi|52214814|dbj|BAD47407.1| thymidine kinase [Bacteroides fragilis YCH46]
gi|251947796|gb|EES88078.1| thymidine kinase [Bacteroides sp. 3_2_5]
gi|263254675|gb|EEZ26109.1| thymidine kinase [Bacteroides sp. 2_1_16]
gi|301161675|emb|CBW21215.1| putative thymidine kinase [Bacteroides fragilis 638R]
gi|335939461|gb|EGN01335.1| thymidine kinase [Bacteroides sp. 2_1_56FAA]
gi|387776632|gb|EIK38732.1| thymidine kinase [Bacteroides fragilis CL07T00C01]
gi|392655218|gb|EIY48861.1| thymidine kinase [Bacteroides fragilis CL03T12C07]
gi|392659339|gb|EIY52959.1| thymidine kinase [Bacteroides fragilis CL03T00C08]
gi|392700284|gb|EIY93446.1| thymidine kinase [Bacteroides fragilis CL05T00C42]
gi|392706243|gb|EIY99366.1| thymidine kinase [Bacteroides fragilis CL07T12C05]
gi|392708567|gb|EIZ01674.1| thymidine kinase [Bacteroides fragilis CL05T12C13]
gi|404581697|gb|EKA86392.1| thymidine kinase [Bacteroides fragilis HMW 615]
Length = 199
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGVRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y
Sbjct: 130 VPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCRECY 188
>gi|342210751|ref|ZP_08703504.1| thymidine kinase [Mycoplasma anatis 1340]
gi|341578928|gb|EGS29266.1| thymidine kinase [Mycoplasma anatis 1340]
Length = 191
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKT LL+RI + N +IK DTR+ D+IV+ +G +
Sbjct: 6 PDGTLEVITGPMFAGKTEELLKRINILSIANINTLIIKPRFDTRFSFDNIVSRNGKFVKA 65
Query: 136 CALTTLSSFRQKFGSDAYDQ-VDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
++ S + YD+ + + IDE FF E++ D + G VIV+GLD D
Sbjct: 66 INVSKPSEILEH-----YDKSIKSVAIDEVHFFDEEIIDVINKLTSK-GVRVIVSGLDMD 119
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y+ R FG V ++ +AD V+KL + C C A F+ RK T+ L+G ++ Y CR
Sbjct: 120 YMMRPFGVVPKLLAIADEVSKLKSVCVVCHSAAAFSFRKDNSTEIRLLGDNE-YEARCRH 178
Query: 254 HYVSG 258
++ G
Sbjct: 179 CHILG 183
>gi|443631138|ref|ZP_21115319.1| thymidine kinase [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443348943|gb|ELS62999.1| thymidine kinase [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 195
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY D++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DVI +DE QFF +D+ + AD G VI AGLD
Sbjct: 61 --TSMTSYAISSAADIWDHISESTDVIAVDEVQFFDQDIVEVLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSD 245
D+ FG V DI+ +A+SVTKL A C CG A T R + +G S+
Sbjct: 118 MDFRGEPFGVVPDIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVIKVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|257076468|ref|ZP_05570829.1| thymidine kinase related protein [Ferroplasma acidarmanus fer1]
Length = 216
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ VI GPMF+GKT+ L+ ++ E GRN + K D RY + TH G++LP
Sbjct: 21 GKLTVITGPMFSGKTSRLIELLEREILAGRNTLLFKPEMDKRYDTTFVTTHKGMRLPAIV 80
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKTVIVAGLDGDY 194
L T + +K + VDVIGIDEAQF+ + E AD + K V A L+ ++
Sbjct: 81 LNTDNEGVEKM-YNLSKNVDVIGIDEAQFW-NHGSILPEIADKIASENKIVYAAALNKNH 138
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKT-------EETKTELIGGSDIY 247
L F + +DII AD V LTA C CG+ A F+ R E+ K IGG + Y
Sbjct: 139 LGNPFKTSMDIISRADQVYSLTAVCAKCGEDATFSQRILNGKEIFGEQIK---IGGMESY 195
Query: 248 MPVCRQHYV 256
P CR+ +V
Sbjct: 196 EPRCRKCFV 204
>gi|372208859|ref|ZP_09496661.1| thymidine kinase [Flavobacteriaceae bacterium S85]
Length = 196
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + + + K DTRY + +V+HD +
Sbjct: 13 GWIEVICGSMFSGKTEELIRRLKRAQIAQQRIEIFKPAIDTRYDEEDVVSHDKNNIRSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R + VDV+GIDEAQFF+D + + C + A+ G VIVAGLD D+
Sbjct: 73 VPAAANIRL-----LANDVDVVGIDEAQFFDDEIVNVCNDLANK-GIRVIVAGLDMDFKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + +++ A+ VTK+ A C G A ++ RK+ E K ++G ++ Y P+ R Y
Sbjct: 127 QPFGPMPNLMATAEYVTKVHAICAKTGSLAHYSHRKSTEDKQVMLGENEAYEPLSRAAY 185
>gi|433447674|ref|ZP_20411114.1| thymidine kinase [Anoxybacillus flavithermus TNO-09.006]
gi|431999811|gb|ELK20723.1| thymidine kinase [Anoxybacillus flavithermus TNO-09.006]
Length = 206
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG + VI G MF+GK+ L+RR++ + V V K D RY +++V+H+G
Sbjct: 3 VMKQSGWLEVICGSMFSGKSEELIRRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ ++ R+ + DV+ IDE QFF E + D ++ AD +G VIVAGLD
Sbjct: 63 VIAIPVSCALDIRKHITA----HTDVVAIDEVQFFDERVVDVVQQLAD-EGYRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + LIG S+
Sbjct: 118 QDFRGEPFGPVPTLMSIAESVTKLQAVCTVCGSPASRTQRLIDGRPASYYDPVILIGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 SYEPRCRHHH 187
>gi|60680149|ref|YP_210293.1| thymidine kinase [Bacteroides fragilis NCTC 9343]
gi|73920097|sp|Q5LHP5.1|KITH_BACFN RecName: Full=Thymidine kinase
gi|60491583|emb|CAH06335.1| putative thymidine kinase [Bacteroides fragilis NCTC 9343]
Length = 199
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGVRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y
Sbjct: 130 IPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCRECY 188
>gi|317503773|ref|ZP_07961785.1| thymidine kinase [Prevotella salivae DSM 15606]
gi|315665070|gb|EFV04725.1| thymidine kinase [Prevotella salivae DSM 15606]
Length = 209
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 26 GRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDQNSIHSTP 85
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+++ +S SD +DV+GIDEAQF +D L + C E A+ G VI+AGLD DY
Sbjct: 86 ISSSASILL-LASD----IDVVGIDEAQFLDDNLVEVCNELANR-GIRVIIAGLDMDYKG 139
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + ++G Y P+CR Y
Sbjct: 140 VPFGPIPALCAIADEVTKVHAICVRCGALAYVSHRLVQNEHRVMLGEETEYEPLCRDCY 198
>gi|313204815|ref|YP_004043472.1| thymidine kinase [Paludibacter propionicigenes WB4]
gi|312444131|gb|ADQ80487.1| Thymidine kinase [Paludibacter propionicigenes WB4]
Length = 194
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+ G I VI G MF+GKT L+RR++ + V + K DTRY D +V+HD
Sbjct: 10 IQQKRGSIEVICGSMFSGKTEELIRRLKRANFAKQRVEIFKPKIDTRYSEDEVVSHDKTA 69
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + + S G VDVIGIDEAQFF E L D C + A+ G VI+AGLD
Sbjct: 70 IRSTPVESSGSILLMSGD-----VDVIGIDEAQFFDEGLVDVCTQLANQ-GIRVIIAGLD 123
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
D+ FG + + +A+ V K+ A C CG A+ + R + K L+G Y P+C
Sbjct: 124 MDFKGVPFGPMPALCAIAEDVFKVHAICVRCGALAYVSHRLVDSDKRVLLGEMTEYEPIC 183
Query: 252 RQHY 255
R Y
Sbjct: 184 RDCY 187
>gi|363542658|ref|ZP_09312241.1| thymidine kinase [Mycoplasma ovipneumoniae SC01]
Length = 184
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 5/177 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI GPMF+GK+ L++RI+ T + VIK D R+ IV+ G+++P
Sbjct: 7 EGIIEVITGPMFSGKSDELIKRIKILTYANIKILVIKPLIDNRFSDCEIVSRSGLRIPTF 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ T + F D Y I IDE QFF ED+ F + A+ G VIV+GLD D+
Sbjct: 67 SAKTTQEIKDLFAKDKYG---AIAIDEIQFFSEDIIPFLDKIANK-GIRVIVSGLDQDFR 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
R+ FG + +++ +A++VTKL A C C + A + R + K LIG S Y CR
Sbjct: 123 RKPFGVLPNLMAIAENVTKLQAVCTICKRAATTSARLVKSEKQNLIGDSAEYEARCR 179
>gi|375012591|ref|YP_004989579.1| thymidine kinase [Owenweeksia hongkongensis DSM 17368]
gi|359348515|gb|AEV32934.1| thymidine kinase [Owenweeksia hongkongensis DSM 17368]
Length = 197
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GKT L+RR++ + V + K DTRY + +V+HD + C
Sbjct: 13 TGWMEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDTRYAEEDVVSHDKNAIRCT 72
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ S+ G D VDVIGIDEAQFF+D + + C E A+ G VIVAGLD D+
Sbjct: 73 PVENSSNLLL-LG----DGVDVIGIDEAQFFDDGIVEVCNELANR-GSRVIVAGLDMDFK 126
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + +++ A+ VTK+ A C G A ++ RKT K ++G Y P+ R +
Sbjct: 127 GKPFGPMPNLMATAEYVTKVHAVCVRTGNLANYSHRKTTNEKQVMLGEHLEYEPLSRAAF 186
>gi|296331345|ref|ZP_06873817.1| thymidine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676331|ref|YP_003868003.1| thymidine kinase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151460|gb|EFG92337.1| thymidine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414575|gb|ADM39694.1| thymidine kinase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 195
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY D++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DVI +DE QFF E++ + AD G VI AGLD
Sbjct: 61 --TSMTSYSISSAADIWDHISESTDVIAVDEVQFFDEEIIEVLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V I+ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPSIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|114566639|ref|YP_753793.1| thymidine kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337574|gb|ABI68422.1| Thymidine kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 178
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 17/186 (9%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVT--HDGVKLPC 135
G+I +I GPMFAGKTT L+RR++ T G NV + K + D+R + T +P
Sbjct: 2 GKIEIITGPMFAGKTTELMRRLERYTLAGNNVVLFKPHIDSRTETEIATTSVRQQFSIPV 61
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
L + G +A V+ IDEAQFF + ++ GKTVI++GLD D
Sbjct: 62 LVL------HKPIGIEA----AVVAIDEAQFFGEWILTYVQSLKDQGKTVIISGLDMDAH 111
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE----LIGGSDIYMPVC 251
RR FG + ++ +ADSV+KLTA C CG+ A +T K + + LIG S+ Y P C
Sbjct: 112 RRPFGFMGQLMAIADSVSKLTAVCR-CGEDAVYTWLKNSLPQPKGNLILIGDSERYEPRC 170
Query: 252 RQHYVS 257
R+ Y S
Sbjct: 171 RKCYAS 176
>gi|218960737|ref|YP_001740512.1| thymidine kinase [Candidatus Cloacamonas acidaminovorans]
gi|167729394|emb|CAO80305.1| thymidine kinase [Candidatus Cloacamonas acidaminovorans str. Evry]
Length = 187
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V+ +G I VI G MF+GKT L+RRI+ + V V K D RY ++IV+H ++
Sbjct: 5 VNQKTGWIEVICGSMFSGKTEELIRRIRRAEYAKQKVLVFKPVIDNRYDANNIVSHSQMQ 64
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
P + D V +I IDEAQFF+ L C + AD G VIVAGLD
Sbjct: 65 APSIPINAPGEIYSYLDDD----VKIIAIDEAQFFDPSLVGICNDLADR-GYRVIVAGLD 119
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
DY FGS+ ++ +A+ +TK A C CG A T R + + L+G +D Y C
Sbjct: 120 QDYKGEPFGSMPQLMAIAEYITKNLAICVVCGNPANRTQRTIHKDEQILVGSTDAYEARC 179
Query: 252 RQ 253
R
Sbjct: 180 RN 181
>gi|124009595|ref|ZP_01694268.1| thymidine kinase [Microscilla marina ATCC 23134]
gi|123984736|gb|EAY24716.1| thymidine kinase [Microscilla marina ATCC 23134]
Length = 212
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 7/184 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I V+ G MF+GKT L+RR++ + VA+ K DTR+ +V+H+ +
Sbjct: 15 TGWIEVVCGSMFSGKTEELIRRVKRAKIAKQQVAIFKPAIDTRFHARHVVSHNANAVMST 74
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + D+ DV+GIDEAQFF E + D E A+ G VIVAGLD D+
Sbjct: 75 PVPSSQEILKNI-----DKCDVVGIDEAQFFDEGIIDVSIELANR-GIRVIVAGLDMDFQ 128
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++ +A+ VTK+ A C CG A ++ R + ++G DIY P+CR+ Y
Sbjct: 129 GKPFGPMPHLMAVAEYVTKVHAICVTCGDIAHYSHRLVSSDEKVVLGEQDIYEPLCRKCY 188
Query: 256 VSGQ 259
S +
Sbjct: 189 YSDE 192
>gi|436833656|ref|YP_007318872.1| Thymidine kinase [Fibrella aestuarina BUZ 2]
gi|384065069|emb|CCG98279.1| Thymidine kinase [Fibrella aestuarina BUZ 2]
Length = 203
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 7/183 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT L+RR+ NV + K + DTRY ++ IV+H+ +
Sbjct: 16 TGWIEVIAGSMFSGKTEELIRRLNRARIAKLNVGIFKPSLDTRYDVNDIVSHNASAIAST 75
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + DV+GIDEAQFF+ ++ C + AD GK VIVAGLD D+
Sbjct: 76 PVPQAADILP-----LATECDVVGIDEAQFFDPNVVHVCHQLADQ-GKRVIVAGLDMDFS 129
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++ +A+ VTK+ A C CG A ++ R + L+G +D Y CR+ +
Sbjct: 130 GKPFGCIPQLMAIAEFVTKVHAICVVCGDVAHYSYRLVPSQERVLLGETDSYEARCRRCF 189
Query: 256 VSG 258
G
Sbjct: 190 NLG 192
>gi|319938512|ref|ZP_08012905.1| thymidine kinase [Coprobacillus sp. 29_1]
gi|319806276|gb|EFW02952.1| thymidine kinase [Coprobacillus sp. 29_1]
Length = 196
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MFAGKT L+RRI + +N+ V K D RY IV+H G K+ C
Sbjct: 7 EGWLEVICGCMFAGKTEELIRRINVLSFAKKNIIVFKPKVDNRYSETEIVSHAGTKVQCI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + D DV+ IDE QFF+ D+ D C AD G V+VAGLD D+
Sbjct: 67 VVENSKDILRYIKPDT----DVVAIDEVQFFDRDIVDVCEYLADR-GLRVMVAGLDKDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG + +++ A+ VTKLTA C CG A T R + E L+G D Y P
Sbjct: 122 GEPFGVLPELLTRAEFVTKLTAVCAKCGAPATRTQRLVDGKPASFEDPIVLVGAVDHYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|371776208|ref|ZP_09482530.1| thymidine kinase [Anaerophaga sp. HS1]
Length = 193
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L ++ S G I VI G MF+GKT LLRR++ + V + K D RY +V
Sbjct: 3 LENKVDKSEKRGWIEVITGSMFSGKTEELLRRLRRARIARQRVEIFKPLVDNRYSEQEVV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+HD +P + + + VDV+GIDEAQFF+ L D C + A+ G V
Sbjct: 63 SHDANSIPSTPVESSGNILL-----LCSNVDVVGIDEAQFFDKGLNDVCNQLANQ-GIRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD D+ + FG + D++ A+ VTK+ A C +CG A F+LRKT + +G +
Sbjct: 117 IVAGLDMDFKGKPFGPMPDLMASAEYVTKVHAICVYCGDLAHFSLRKTASDRLVEVGADE 176
Query: 246 IYMPVCRQHY 255
Y VCR Y
Sbjct: 177 AYEAVCRHCY 186
>gi|374309565|ref|YP_005055995.1| thymidine kinase [Granulicella mallensis MP5ACTX8]
gi|358751575|gb|AEU34965.1| Thymidine kinase [Granulicella mallensis MP5ACTX8]
Length = 201
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+ P G + VI GPMF+GK+ L+RR++ + VA K + D RY +I +H
Sbjct: 3 TQPPGVLEVITGPMFSGKSEELIRRLKRARIARQRVACYKPDIDLRYHRTAIASHSAQTH 62
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
+ T+ R+ +V+V+GIDE QFF+D GK V++AGLD
Sbjct: 63 EATTVATVERLREALYPQ-LSEVEVVGIDEVQFFDDGIIPLAVELIAMGKRVLMAGLDTT 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG V +++ +AD VTKL+A C CG A T R + + ++G + +Y CR
Sbjct: 122 FEAEPFGPVPNLMAIADKVTKLSAVCMVCGASAIHTQRLGQSQELVVVGAAGLYEARCRA 181
Query: 254 HY 255
H+
Sbjct: 182 HF 183
>gi|393786583|ref|ZP_10374719.1| thymidine kinase [Bacteroides nordii CL02T12C05]
gi|392660212|gb|EIY53829.1| thymidine kinase [Bacteroides nordii CL02T12C05]
Length = 199
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 102/180 (56%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + D RY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPSIDVRYSEADVVSHDSNAISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSSLIDVCNQLAN-NGIRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K ++G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVMLGETAEYEPLCRECYL 189
>gi|375083892|ref|ZP_09730906.1| thymidine kinase [Thermococcus litoralis DSM 5473]
gi|374741484|gb|EHR77908.1| thymidine kinase [Thermococcus litoralis DSM 5473]
Length = 192
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKT+ L++RI+ + R A+ K + D RY D +V H+G+
Sbjct: 3 PEGFLEVITGPMFAGKTSELIKRIERQIFAKRKAALFKPSIDNRYSEDKVVAHNGLSYEA 62
Query: 136 CAL-TTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
+ TT R + + +VIGIDE QFF + + + AD +G VI +GL+ D
Sbjct: 63 FVVPTTEEGVRTIYQKTKEEDFEVIGIDEVQFFPMSIVEILNKLAD-EGVYVIASGLNLD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIY 247
+ F +++ LAD++ LTA C CG+ A T R ++ L+GG + Y
Sbjct: 122 FKGEPFEVTKELLALADNIVYLTAICSVCGREATRTQRLINGKPAPRDSPRILVGGIEAY 181
Query: 248 MPVCRQHYV 256
CR+H++
Sbjct: 182 EARCRRHHI 190
>gi|313147486|ref|ZP_07809679.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423280185|ref|ZP_17259098.1| thymidine kinase [Bacteroides fragilis HMW 610]
gi|424666280|ref|ZP_18103316.1| thymidine kinase [Bacteroides fragilis HMW 616]
gi|313136253|gb|EFR53613.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574533|gb|EKA79284.1| thymidine kinase [Bacteroides fragilis HMW 616]
gi|404584521|gb|EKA89186.1| thymidine kinase [Bacteroides fragilis HMW 610]
Length = 199
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNTISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGVRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y
Sbjct: 130 IPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECY 188
>gi|398305190|ref|ZP_10508776.1| thymidine kinase [Bacillus vallismortis DV1-F-3]
Length = 195
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY D++V+H+G +
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMKSY 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
A++ + + + DVI +DE QFF E + + AD G VI AGLD D+
Sbjct: 67 AISAAADIWEHIS----ESTDVIAVDEVQFFDEGIVEVLSSLADK-GYRVIAAGLDMDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG V DI+ +A+SVTKL A C CG A T R + + L+G S+ Y
Sbjct: 122 GEPFGVVPDIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASESYEA 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|119609912|gb|EAW89506.1| thymidine kinase 1, soluble, isoform CRA_b [Homo sapiens]
Length = 181
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 12/130 (9%)
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIVA LDG
Sbjct: 23 LPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIVAALDG 73
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+ R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y VCR
Sbjct: 74 TFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYHSVCR 133
Query: 253 QHY---VSGQ 259
Y SGQ
Sbjct: 134 LCYFKKASGQ 143
>gi|357041967|ref|ZP_09103674.1| thymidine kinase [Prevotella histicola F0411]
gi|355369981|gb|EHG17370.1| thymidine kinase [Prevotella histicola F0411]
Length = 196
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 99/177 (55%), Gaps = 7/177 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
I VI G MF+GKT L+RR++ + V + KS+ DTRY +++V+HD + +
Sbjct: 17 IEVICGSMFSGKTEELIRRMKRAQFAKQRVEIFKSSIDTRYSEENVVSHDQNTIRSTPID 76
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLRRS 198
+ + SD +DV+GIDEAQF +D L D C + A++ G VIVAGLD DY
Sbjct: 77 SSGNILL-LASD----IDVVGIDEAQFLDDGLMDVCNQLANN-GVRVIVAGLDMDYKGVP 130
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + ++G Y P+CR+ Y
Sbjct: 131 FGPIPALCAVADEVTKVHAICVKCGALAYVSHRLIADDHRVMLGEQQEYEPLCRECY 187
>gi|381210931|ref|ZP_09918002.1| thymidine kinase [Lentibacillus sp. Grbi]
Length = 207
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V S SG + VI G MF+GK+ L+RR++ T +V V K D RY +S+V+H+G
Sbjct: 3 VMSQSGWVEVICGSMFSGKSEELIRRVRRATYGNLSVRVFKPVIDDRYSDESVVSHNGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLD 191
+ + + ++ +DVIGIDE QFF+D + E A+ G VI AGLD
Sbjct: 63 IIARPVKNSEKILEYI---EHNHIDVIGIDEVQFFDDNIVSVANELANR-GVRVIAAGLD 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG + D++ ++S++KL A C CG A T R + L+G S+
Sbjct: 119 TDFRGEPFGPMPDMMAQSESISKLNAICPVCGSPANRTQRLIDGKPASYNDPVILVGASE 178
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 179 SYEPRCRHHH 188
>gi|319952866|ref|YP_004164133.1| thymidine kinase [Cellulophaga algicola DSM 14237]
gi|319421526|gb|ADV48635.1| Thymidine kinase [Cellulophaga algicola DSM 14237]
Length = 213
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 7/199 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPQVDTRYHEEMVVSHDANQIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRL-----LADGCDVVGIDEAQFFDDEIVAVCNDLANR-GIRVLVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK+ K L+G ++ Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAICTRTGNLANYSFRKSTNDKLVLLGETEAYEPLSRAAYY 187
Query: 257 SGQVVVEAARIVLESQKVQ 275
+ + I +E+++V+
Sbjct: 188 KAMLREKIKDIDIEAEQVK 206
>gi|20806669|ref|NP_621840.1| thymidine kinase [Thermoanaerobacter tengcongensis MB4]
gi|60390121|sp|Q8RDA1.1|KITH_THETN RecName: Full=Thymidine kinase
gi|20515119|gb|AAM23444.1| Thymidine kinase [Thermoanaerobacter tengcongensis MB4]
Length = 193
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIRRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGSSINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T S D V+ IDE QFF+ L D RE AD GK VI AGLD D+
Sbjct: 69 VTKASEILDLLEEDT----QVVAIDEIQFFDHSLVDVVREIADM-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG DI+ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGVTPDIMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>gi|189462775|ref|ZP_03011560.1| hypothetical protein BACCOP_03472 [Bacteroides coprocola DSM 17136]
gi|189430391|gb|EDU99375.1| thymidine kinase [Bacteroides coprocola DSM 17136]
Length = 179
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 7/170 (4%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR++ T + V + K DTRY +V+HD +P + + +S
Sbjct: 1 MFSGKTEELIRRLKRATFARQRVEIFKPAIDTRYSEAEVVSHDNNSIPSTPVDSSASILL 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
F S ++DV+GIDEAQFF+D L + C E AD G VI+AGLD D+ FG + +
Sbjct: 61 -FSS----EIDVVGIDEAQFFDDGLVNVCNELADR-GVRVIIAGLDMDFKGVPFGPMPAL 114
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+AD VTK+ A C CG A+ + R K L+G + Y P+CR Y
Sbjct: 115 CAIADEVTKVHAICVKCGDLAYVSHRTVANDKRVLLGEKEEYEPLCRCCY 164
>gi|298207070|ref|YP_003715249.1| thymidine kinase [Croceibacter atlanticus HTCC2559]
gi|83849704|gb|EAP87572.1| thymidine kinase [Croceibacter atlanticus HTCC2559]
Length = 214
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY D +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFARQKVEIFKPAIDVRYDEDMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANIRL-----LADGCDVVGIDEAQFFDDEIVAVCNDLANK-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + +++ A+ VTK+ A C G A ++ RK+E K ++G ++ Y P+ R Y
Sbjct: 128 NPFGPMPNLMATAEYVTKVHAVCTRTGNLAQYSFRKSENDKLVMLGETEEYEPLSRAAYF 187
Query: 257 SGQV 260
++
Sbjct: 188 KARL 191
>gi|156348392|ref|XP_001621833.1| hypothetical protein NEMVEDRAFT_v1g221517 [Nematostella vectensis]
gi|156208118|gb|EDO29733.1| predicted protein [Nematostella vectensis]
Length = 198
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + S G I VI G MF+GKT L+RR++ + V + K + DTRY + +V
Sbjct: 3 LENTVNQSEQFGWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPSVDTRYDEEMVV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+HD ++ + + R DV+GIDEAQFF+D + C + A+ G V
Sbjct: 63 SHDANEIRSTPVPLAGNIRI-----LAQGCDVVGIDEAQFFDDEIVSVCNDLANS-GIRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
IVAGLD D+ FG + +++ A+ VTK+ A C G A ++ RKTE K ++G +D
Sbjct: 117 IVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCTRTGNLANYSFRKTENDKLVMLGETD 176
Query: 246 IYMPVCRQHY 255
Y P+ R +
Sbjct: 177 EYEPLSRAAF 186
>gi|384097204|ref|ZP_09998325.1| thymidine kinase [Imtechella halotolerans K1]
gi|383837172|gb|EID76572.1| thymidine kinase [Imtechella halotolerans K1]
Length = 228
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 60 FSLQNRNLHSEASVSSPS--GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKD 117
F L+N + E +V+ G I VI G MF+GKT L+RR++ + V + K D
Sbjct: 3 FRLENYKMFLENTVNHKEQFGWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAID 62
Query: 118 TRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCRE 176
TRY + +V+HD ++ + ++ R D DV+GIDEAQFF+D + C +
Sbjct: 63 TRYNEEMVVSHDANQIRSTPVPAAANIRL-----LADSCDVVGIDEAQFFDDEIVSVCND 117
Query: 177 AADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET 236
A+ G VIVAGLD D+ FG + ++ A+ VTK+ A C G A ++ RK
Sbjct: 118 LANK-GIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTRTGNLAQYSHRKAAGD 176
Query: 237 KTELIGGSDIYMPVCRQHY 255
K ++G +D Y P+ R +
Sbjct: 177 KLVMLGETDAYEPLSRAAF 195
>gi|242371610|ref|ZP_04817184.1| thymidine kinase [Staphylococcus epidermidis M23864:W1]
gi|242350677|gb|EES42278.1| thymidine kinase [Staphylococcus epidermidis M23864:W1]
Length = 199
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+HDG ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHDGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T R+ D ++ VD+IGIDE QFF+D E +G V+VAGLD D+
Sbjct: 67 NISTA---REILNQDLHN-VDIIGIDEVQFFDDEIVNIAEQLAENGHRVVVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFEPMPKLLAVSEQVTKLQAVCAVCGSPSSRTQRLINGEPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|260592636|ref|ZP_05858094.1| thymidine kinase [Prevotella veroralis F0319]
gi|260535406|gb|EEX18023.1| thymidine kinase [Prevotella veroralis F0319]
Length = 200
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+HD + A
Sbjct: 15 GRIEVICGSMFSGKTEELIRRMRRAQFAKQRVEIFKPSIDTRYSEEDVVSHDQNSIHSTA 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + SD +DV+GIDEAQF E L D C + A++ G VI+AGLD DY
Sbjct: 75 IDSSGNILL-LASD----IDVVGIDEAQFLDEGLVDVCNQLANN-GVRVIIAGLDMDYKG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + + ++G Y P+CR Y
Sbjct: 129 VPFGPMPALCAIADDVTKVHAICVKCGALAYVSHRLIADDRRVMLGEQQEYEPLCRDCY 187
>gi|288800742|ref|ZP_06406199.1| thymidine kinase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332203|gb|EFC70684.1| thymidine kinase [Prevotella sp. oral taxon 299 str. F0039]
Length = 200
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+HD +
Sbjct: 19 GRIEVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPSIDTRYSEEEVVSHDKTSIKSTP 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S SD ++V+GIDEAQFF E L D C + A+ G VI+AGLD D+
Sbjct: 79 VDASGSILL-LSSD----IEVVGIDEAQFFDESLVDVCNQLANK-GVRVIIAGLDMDFKG 132
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R E + L+G Y P+CR+ +
Sbjct: 133 IPFGPMPALCAIADDVTKVHAICVKCGALAYVSHRLVENERRVLLGEQLEYEPLCRECF 191
>gi|379003731|ref|YP_005259403.1| thymidine kinase [Pyrobaculum oguniense TE7]
gi|375159184|gb|AFA38796.1| Thymidine kinase [Pyrobaculum oguniense TE7]
Length = 185
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
VIVGPMFAGKTT L+RR++ G+ V K + D RY + H+G+K +
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGKRAIVFKPSIDARYDSSKVAAHNGLKFGAYVVPPD 63
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
+ G D DV+ +DE QFF L D E A DG+ VI AGL+ D+ F
Sbjct: 64 EVGVETIGKLGLDY-DVVAVDEVQFFPPRLADVLNELA--DGRVVIAAGLNLDFRGEPFE 120
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVCRQH 254
+ + + AD V LTA C+ CG+ A T R + + L+GG D Y CR+H
Sbjct: 121 TTMRAMAFADKVISLTAVCKVCGRPATRTQRLINGAPAPKNSPRILVGGGDSYEARCRRH 180
Query: 255 YV 256
YV
Sbjct: 181 YV 182
>gi|242241526|ref|ZP_04795971.1| thymidine kinase [Staphylococcus epidermidis W23144]
gi|416128251|ref|ZP_11597256.1| thymidine kinase [Staphylococcus epidermidis FRI909]
gi|418614620|ref|ZP_13177583.1| thymidine kinase [Staphylococcus epidermidis VCU118]
gi|418632441|ref|ZP_13194872.1| thymidine kinase [Staphylococcus epidermidis VCU128]
gi|418633584|ref|ZP_13195992.1| thymidine kinase [Staphylococcus epidermidis VCU129]
gi|420174287|ref|ZP_14680740.1| thymidine kinase [Staphylococcus epidermidis NIHLM061]
gi|420178548|ref|ZP_14684878.1| thymidine kinase [Staphylococcus epidermidis NIHLM057]
gi|420181342|ref|ZP_14687545.1| thymidine kinase [Staphylococcus epidermidis NIHLM053]
gi|420191023|ref|ZP_14696960.1| thymidine kinase [Staphylococcus epidermidis NIHLM037]
gi|420193552|ref|ZP_14699403.1| thymidine kinase [Staphylococcus epidermidis NIHLM023]
gi|420200810|ref|ZP_14706450.1| thymidine kinase [Staphylococcus epidermidis NIHLM031]
gi|420204946|ref|ZP_14710484.1| thymidine kinase [Staphylococcus epidermidis NIHLM015]
gi|242235069|gb|EES37380.1| thymidine kinase [Staphylococcus epidermidis W23144]
gi|319399601|gb|EFV87856.1| thymidine kinase [Staphylococcus epidermidis FRI909]
gi|374819510|gb|EHR83632.1| thymidine kinase [Staphylococcus epidermidis VCU118]
gi|374832348|gb|EHR96063.1| thymidine kinase [Staphylococcus epidermidis VCU128]
gi|374838922|gb|EHS02455.1| thymidine kinase [Staphylococcus epidermidis VCU129]
gi|394245221|gb|EJD90538.1| thymidine kinase [Staphylococcus epidermidis NIHLM061]
gi|394246271|gb|EJD91532.1| thymidine kinase [Staphylococcus epidermidis NIHLM057]
gi|394246690|gb|EJD91944.1| thymidine kinase [Staphylococcus epidermidis NIHLM053]
gi|394258121|gb|EJE03013.1| thymidine kinase [Staphylococcus epidermidis NIHLM037]
gi|394259819|gb|EJE04650.1| thymidine kinase [Staphylococcus epidermidis NIHLM023]
gi|394267554|gb|EJE12141.1| thymidine kinase [Staphylococcus epidermidis NIHLM031]
gi|394271667|gb|EJE16156.1| thymidine kinase [Staphylococcus epidermidis NIHLM015]
Length = 199
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E+ L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKEDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|404417809|ref|ZP_10999595.1| thymidine kinase [Staphylococcus arlettae CVD059]
gi|403489821|gb|EJY95380.1| thymidine kinase [Staphylococcus arlettae CVD059]
Length = 199
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY D IV+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+TT S + S +VDVIGIDE QFFED E G VI AGLD D+
Sbjct: 67 NITTASEILRHDLS----EVDVIGIDEVQFFEDEVVNIAEQLAARGHRVITAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
+ F + +++ +++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 123 KPFKPIPELLAVSEVVTKLQAVCAVCGASSSRTQRLIDGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|392396493|ref|YP_006433094.1| thymidine kinase [Flexibacter litoralis DSM 6794]
gi|390527571|gb|AFM03301.1| thymidine kinase [Flexibacter litoralis DSM 6794]
Length = 211
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR+ ++V + K DTRY +V+H+ ++ A
Sbjct: 17 GWIEVVCGSMFSGKTEELIRRLTRAKIARQSVQIFKPAIDTRYDDQKVVSHNQNEIDSIA 76
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S Y VIGIDEAQFF+ +L + C+ A+ GK +++AGLD D+
Sbjct: 77 VEKASDILTLLKEKNYQ---VIGIDEAQFFDKELLNICQILANQ-GKRIVIAGLDMDFAG 132
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + ++ +A+ VTK+ A C CGK A ++ R T + L+G Y CR+ +V
Sbjct: 133 KPFGIMPQLLAIAEYVTKVHAICMCCGKVAAYSFRLTPSKQKILLGEKTEYEARCRKCFV 192
Query: 257 SGQVVVE 263
G + +E
Sbjct: 193 KGNLNLE 199
>gi|83319659|ref|YP_424134.1| thymidine kinase [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|109892484|sp|Q2SSX9.1|KITH_MYCCT RecName: Full=Thymidine kinase
gi|83283545|gb|ABC01477.1| thymidine kinase [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 209
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S+ G I +I G MFAGKT +RR++ + + V K + D RY +++I++H
Sbjct: 10 EAYNSNKMGWIELITGCMFAGKTEEFIRRLKVLSYAKKRVLAFKPSIDNRYSVENIISHS 69
Query: 130 GVKLPCCALTTLSSFRQKF-GSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIV 187
G KL + + +Q + QVDVIGIDE QFF E++ D + AD+ G VIV
Sbjct: 70 GSKLDSYLVKSSDEIKQIVEKENQIQQVDVIGIDEVQFFDENVVDIIEQLADN-GIIVIV 128
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELI 241
GLD D+ F +V ++ A+ VTKL ARC CG A + R ++ L+
Sbjct: 129 NGLDKDFRGLPFKNVDKLLVKAEFVTKLRARCHLCGSFANRSQRIVNGQPALWDSPLILV 188
Query: 242 GGSDIYMPVCRQHYVS 257
G + Y CR+ ++S
Sbjct: 189 DGKESYEARCRKCFIS 204
>gi|420186328|ref|ZP_14692399.1| thymidine kinase [Staphylococcus epidermidis NIHLM040]
gi|394252545|gb|EJD97577.1| thymidine kinase [Staphylococcus epidermidis NIHLM040]
Length = 199
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|418326911|ref|ZP_12938086.1| thymidine kinase [Staphylococcus epidermidis VCU071]
gi|420164485|ref|ZP_14671214.1| thymidine kinase [Staphylococcus epidermidis NIHLM095]
gi|420169227|ref|ZP_14675830.1| thymidine kinase [Staphylococcus epidermidis NIHLM087]
gi|365224017|gb|EHM65287.1| thymidine kinase [Staphylococcus epidermidis VCU071]
gi|394231590|gb|EJD77216.1| thymidine kinase [Staphylococcus epidermidis NIHLM095]
gi|394231690|gb|EJD77314.1| thymidine kinase [Staphylococcus epidermidis NIHLM087]
Length = 199
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVSIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|27468635|ref|NP_765272.1| thymidine kinase [Staphylococcus epidermidis ATCC 12228]
gi|57867594|ref|YP_189290.1| thymidine kinase [Staphylococcus epidermidis RP62A]
gi|251812170|ref|ZP_04826643.1| thymidine kinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876473|ref|ZP_06285339.1| thymidine kinase [Staphylococcus epidermidis SK135]
gi|417646853|ref|ZP_12296705.1| thymidine kinase [Staphylococcus epidermidis VCU144]
gi|417656875|ref|ZP_12306553.1| thymidine kinase [Staphylococcus epidermidis VCU028]
gi|417912468|ref|ZP_12556160.1| thymidine kinase [Staphylococcus epidermidis VCU105]
gi|417913845|ref|ZP_12557506.1| thymidine kinase [Staphylococcus epidermidis VCU109]
gi|418604059|ref|ZP_13167426.1| thymidine kinase [Staphylococcus epidermidis VCU041]
gi|418607528|ref|ZP_13170758.1| thymidine kinase [Staphylococcus epidermidis VCU057]
gi|418609405|ref|ZP_13172558.1| thymidine kinase [Staphylococcus epidermidis VCU065]
gi|418622350|ref|ZP_13185102.1| thymidine kinase [Staphylococcus epidermidis VCU123]
gi|418623905|ref|ZP_13186599.1| thymidine kinase [Staphylococcus epidermidis VCU125]
gi|418663746|ref|ZP_13225255.1| thymidine kinase [Staphylococcus epidermidis VCU081]
gi|419768514|ref|ZP_14294636.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-250]
gi|419771573|ref|ZP_14297624.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-K]
gi|420171720|ref|ZP_14678255.1| thymidine kinase [Staphylococcus epidermidis NIHLM070]
gi|420173644|ref|ZP_14680135.1| thymidine kinase [Staphylococcus epidermidis NIHLM067]
gi|420186951|ref|ZP_14692975.1| thymidine kinase [Staphylococcus epidermidis NIHLM039]
gi|420198056|ref|ZP_14703774.1| thymidine kinase [Staphylococcus epidermidis NIHLM020]
gi|420202832|ref|ZP_14708420.1| thymidine kinase [Staphylococcus epidermidis NIHLM018]
gi|420207940|ref|ZP_14713425.1| thymidine kinase [Staphylococcus epidermidis NIHLM008]
gi|420210299|ref|ZP_14715728.1| thymidine kinase [Staphylococcus epidermidis NIHLM003]
gi|420212555|ref|ZP_14717904.1| thymidine kinase [Staphylococcus epidermidis NIHLM001]
gi|420220978|ref|ZP_14725933.1| thymidine kinase [Staphylococcus epidermidis NIH04008]
gi|420228592|ref|ZP_14733341.1| thymidine kinase [Staphylococcus epidermidis NIH05003]
gi|420233584|ref|ZP_14738192.1| thymidine kinase [Staphylococcus epidermidis NIH051668]
gi|421608827|ref|ZP_16050039.1| thymidine kinase [Staphylococcus epidermidis AU12-03]
gi|38258102|sp|Q8CRM9.1|KITH_STAES RecName: Full=Thymidine kinase
gi|71153801|sp|Q5HMA3.1|KITH_STAEQ RecName: Full=Thymidine kinase
gi|27316182|gb|AAO05316.1|AE016749_262 thymidine kinase [Staphylococcus epidermidis ATCC 12228]
gi|57638252|gb|AAW55040.1| thymidine kinase [Staphylococcus epidermidis RP62A]
gi|251804267|gb|EES56924.1| thymidine kinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294725|gb|EFA87253.1| thymidine kinase [Staphylococcus epidermidis SK135]
gi|329726113|gb|EGG62585.1| thymidine kinase [Staphylococcus epidermidis VCU144]
gi|329735653|gb|EGG71936.1| thymidine kinase [Staphylococcus epidermidis VCU028]
gi|341650680|gb|EGS74496.1| thymidine kinase [Staphylococcus epidermidis VCU105]
gi|341654303|gb|EGS78050.1| thymidine kinase [Staphylococcus epidermidis VCU109]
gi|374404382|gb|EHQ75356.1| thymidine kinase [Staphylococcus epidermidis VCU057]
gi|374405855|gb|EHQ76766.1| thymidine kinase [Staphylococcus epidermidis VCU041]
gi|374407807|gb|EHQ78655.1| thymidine kinase [Staphylococcus epidermidis VCU065]
gi|374411284|gb|EHQ82001.1| thymidine kinase [Staphylococcus epidermidis VCU081]
gi|374826944|gb|EHR90819.1| thymidine kinase [Staphylococcus epidermidis VCU123]
gi|374829149|gb|EHR92962.1| thymidine kinase [Staphylococcus epidermidis VCU125]
gi|383359878|gb|EID37288.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-250]
gi|383361071|gb|EID38453.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-K]
gi|394236835|gb|EJD82338.1| thymidine kinase [Staphylococcus epidermidis NIHLM070]
gi|394239681|gb|EJD85116.1| thymidine kinase [Staphylococcus epidermidis NIHLM067]
gi|394256917|gb|EJE01841.1| thymidine kinase [Staphylococcus epidermidis NIHLM039]
gi|394264987|gb|EJE09653.1| thymidine kinase [Staphylococcus epidermidis NIHLM020]
gi|394269011|gb|EJE13556.1| thymidine kinase [Staphylococcus epidermidis NIHLM018]
gi|394274960|gb|EJE19355.1| thymidine kinase [Staphylococcus epidermidis NIHLM008]
gi|394276533|gb|EJE20871.1| thymidine kinase [Staphylococcus epidermidis NIHLM003]
gi|394279676|gb|EJE23979.1| thymidine kinase [Staphylococcus epidermidis NIHLM001]
gi|394285428|gb|EJE29507.1| thymidine kinase [Staphylococcus epidermidis NIH04008]
gi|394294626|gb|EJE38297.1| thymidine kinase [Staphylococcus epidermidis NIH05003]
gi|394299866|gb|EJE43394.1| thymidine kinase [Staphylococcus epidermidis NIH051668]
gi|406655480|gb|EKC81907.1| thymidine kinase [Staphylococcus epidermidis AU12-03]
Length = 199
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|293366083|ref|ZP_06612771.1| thymidine kinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417660240|ref|ZP_12309829.1| thymidine kinase [Staphylococcus epidermidis VCU045]
gi|417908980|ref|ZP_12552730.1| thymidine kinase [Staphylococcus epidermidis VCU037]
gi|418613173|ref|ZP_13176189.1| thymidine kinase [Staphylococcus epidermidis VCU117]
gi|418617884|ref|ZP_13180770.1| thymidine kinase [Staphylococcus epidermidis VCU120]
gi|418627654|ref|ZP_13190226.1| thymidine kinase [Staphylococcus epidermidis VCU126]
gi|418629949|ref|ZP_13192442.1| thymidine kinase [Staphylococcus epidermidis VCU127]
gi|420182090|ref|ZP_14688232.1| thymidine kinase [Staphylococcus epidermidis NIHLM049]
gi|420195936|ref|ZP_14701720.1| thymidine kinase [Staphylococcus epidermidis NIHLM021]
gi|420215231|ref|ZP_14720502.1| thymidine kinase [Staphylococcus epidermidis NIH05005]
gi|420216736|ref|ZP_14721934.1| thymidine kinase [Staphylococcus epidermidis NIH05001]
gi|420223649|ref|ZP_14728544.1| thymidine kinase [Staphylococcus epidermidis NIH08001]
gi|420226178|ref|ZP_14731000.1| thymidine kinase [Staphylococcus epidermidis NIH06004]
gi|420230978|ref|ZP_14735655.1| thymidine kinase [Staphylococcus epidermidis NIH04003]
gi|420236014|ref|ZP_14740545.1| thymidine kinase [Staphylococcus epidermidis NIH051475]
gi|291319806|gb|EFE60164.1| thymidine kinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329734157|gb|EGG70475.1| thymidine kinase [Staphylococcus epidermidis VCU045]
gi|341654620|gb|EGS78359.1| thymidine kinase [Staphylococcus epidermidis VCU037]
gi|374816609|gb|EHR80810.1| thymidine kinase [Staphylococcus epidermidis VCU117]
gi|374817145|gb|EHR81331.1| thymidine kinase [Staphylococcus epidermidis VCU120]
gi|374829100|gb|EHR92914.1| thymidine kinase [Staphylococcus epidermidis VCU126]
gi|374832468|gb|EHR96178.1| thymidine kinase [Staphylococcus epidermidis VCU127]
gi|394250554|gb|EJD95736.1| thymidine kinase [Staphylococcus epidermidis NIHLM049]
gi|394262537|gb|EJE07299.1| thymidine kinase [Staphylococcus epidermidis NIHLM021]
gi|394282511|gb|EJE26704.1| thymidine kinase [Staphylococcus epidermidis NIH05005]
gi|394287147|gb|EJE31114.1| thymidine kinase [Staphylococcus epidermidis NIH08001]
gi|394291415|gb|EJE35227.1| thymidine kinase [Staphylococcus epidermidis NIH05001]
gi|394292664|gb|EJE36404.1| thymidine kinase [Staphylococcus epidermidis NIH06004]
gi|394295861|gb|EJE39497.1| thymidine kinase [Staphylococcus epidermidis NIH04003]
gi|394301650|gb|EJE45105.1| thymidine kinase [Staphylococcus epidermidis NIH051475]
Length = 199
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHMLEEVNVIGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|399022629|ref|ZP_10724701.1| thymidine kinase [Chryseobacterium sp. CF314]
gi|398084465|gb|EJL75150.1| thymidine kinase [Chryseobacterium sp. CF314]
Length = 196
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 102/184 (55%), Gaps = 7/184 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S SG + VI G MF+GKT L+RR++ G+NV + K DTRY + +V+H+ K+
Sbjct: 10 SKQSGWMEVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDTRYSDEDVVSHNQNKI 69
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
A+ + DV+GIDEAQFF E + + + A+ G V+VAGLD
Sbjct: 70 RSTAVENPNEILL-----LASNCDVVGIDEAQFFDESIVEIANQLAN-SGIRVVVAGLDM 123
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+L R FG + +++ A+ VTK+ A C+ G A +++R T+ +G ++ Y V R
Sbjct: 124 DFLGRPFGPMPNLMATAEYVTKVHAICKRTGNLANYSMRITQGNNLVELGETESYEAVSR 183
Query: 253 QHYV 256
+ ++
Sbjct: 184 RVFI 187
>gi|365155866|ref|ZP_09352213.1| thymidine kinase [Bacillus smithii 7_3_47FAA]
gi|363627944|gb|EHL78772.1| thymidine kinase [Bacillus smithii 7_3_47FAA]
Length = 207
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ +N+ V K D RY +++V+H+G+
Sbjct: 7 SGWVEVICGSMFSGKSEELIRRVRRAEFAKQNILVFKPKLDNRYSEEAVVSHNGISFEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + D +DV+ IDE QFF E + + + AD G VIVAGLD D+
Sbjct: 67 PVESSQEIVELVTED----IDVVAIDETQFFDEGIVEAVKHLADR-GHRVIVAGLDLDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG + ++ A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GEPFGPMPALMATAEMVTKLQAVCTVCGSPASRTQRLINGSPASYDDPIILVGASESYEP 181
Query: 250 VCRQHYV 256
CR H+V
Sbjct: 182 RCRHHHV 188
>gi|373461531|ref|ZP_09553270.1| thymidine kinase [Prevotella maculosa OT 289]
gi|371951835|gb|EHO69677.1| thymidine kinase [Prevotella maculosa OT 289]
Length = 194
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 13 GRIEVVCGSMFSGKTEELIRRMKRAKFAKQRVEIFKPTVDTRYSDEDVVSHDQNAIHSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SD +DV+GIDEAQF +D L D C E A+ G VI+AGLD DY
Sbjct: 73 IDASGAILL-LASD----IDVVGIDEAQFLDDGLVDVCNELANK-GVRVIIAGLDMDYKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R L+G + Y P+CR Y
Sbjct: 127 VPFGPIPALCAIADEVTKVHAICVRCGALAYVSHRLVNNDHRVLLGEKEEYEPLCRDCY 185
>gi|311033346|ref|ZP_07711436.1| thymidine kinase [Bacillus sp. m3-13]
Length = 201
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + I G MF+GK+ L+RR++ + + V K D RY +++V+H+G +
Sbjct: 7 SGWVEAICGSMFSGKSEELIRRMRRSQFAKQEIQVFKPAIDNRYSDEAVVSHNGTSI--I 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
AL SS Q + +VIGIDE QFF+D + + +E A+ G VIVAGLD D+
Sbjct: 65 ALPVPSS--QSILDKVQPETEVIGIDEVQFFDDQIVEVVQELANR-GYCVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG + +++ +A++VTKL A C CG A T R L+G S+ Y P
Sbjct: 122 GEPFGKMPELLAIAETVTKLQAVCAVCGSPASRTQRLINGEPANYDDPIILVGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|429742002|ref|ZP_19275649.1| thymidine kinase [Porphyromonas catoniae F0037]
gi|429157643|gb|EKY00224.1| thymidine kinase [Porphyromonas catoniae F0037]
Length = 194
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ G V + K + DTRY +V+HD +
Sbjct: 14 GSIEVVCGSMFSGKTEELIRRLRRAKIAGLRVEIFKPSIDTRYDDVQVVSHDHNTILSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S+ +VDVIGIDEAQFF++ EA G VI+AGLD D+ R+
Sbjct: 74 VDNSSNILL-----LASEVDVIGIDEAQFFDERLPEVVEALADQGIRVIIAGLDLDFKRK 128
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +ADSV K+ A C CG A ++ R + ++G + Y P+CR Y+
Sbjct: 129 PFGPMATLCAIADSVDKIHAICVECGSWANYSYRLVSGEQQVMLGEAAEYSPLCRTCYL 187
>gi|269114829|ref|YP_003302592.1| thymidine kinase [Mycoplasma hominis ATCC 23114]
gi|268322454|emb|CAX37189.1| Thymidine kinase [Mycoplasma hominis ATCC 23114]
Length = 195
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ LLRR++ +IK D R+ D IV+ GV+ +
Sbjct: 8 GMIEVITGPMFSGKSEELLRRVRTLEYAKMLPLLIKPEYDNRFSDDEIVSRCGVRRKTHS 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L ++ + D Y I IDEA FF + + + G VIVAGLD DYLR+
Sbjct: 68 LKNINEVYELLKQDKYK---AIIIDEAHFFGNSLIEVADDLANKGYLVIVAGLDQDYLRK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FG + ++ +A+ VTKL A C C A + RK + LIG + Y CR+ ++
Sbjct: 125 PFGPIPALMAMAERVTKLQAICVVCQHAASTSFRKDSSNEQNLIGDYNEYEARCRKCHIM 184
Query: 258 GQ 259
GQ
Sbjct: 185 GQ 186
>gi|23100454|ref|NP_693921.1| thymidine kinase [Oceanobacillus iheyensis HTE831]
gi|38372365|sp|Q8EM59.1|KITH_OCEIH RecName: Full=Thymidine kinase
gi|22778687|dbj|BAC14955.1| thymidine kinase [Oceanobacillus iheyensis HTE831]
Length = 207
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V +G + +I G MF+GK+ L+RR++ T NV V K D RY +IV+HDG
Sbjct: 3 VMKQNGWVELICGSMFSGKSEELIRRVRRATYAHINVRVYKPAIDDRYDDKAIVSHDGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ + D + V+++GIDE QFF+ ++ D E AD G VIVAGLD
Sbjct: 63 TMARPIHDAVEILE----DVDNNVEIVGIDEVQFFDNNVVDVIEELADR-GIRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ F V I+ LA+SVTKL A C CG A T R + L+G S+
Sbjct: 118 LDFRGEPFEPVPKIMALAESVTKLNAICPICGSPASRTQRLIDGKPASYNDPIILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 SYEPRCRHHH 187
>gi|383120059|ref|ZP_09940793.1| thymidine kinase [Bacteroides sp. 1_1_6]
gi|382985164|gb|EES66407.2| thymidine kinase [Bacteroides sp. 1_1_6]
Length = 175
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 7/174 (4%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR++ + V + K DTRY + +V+HD + + + +S
Sbjct: 1 MFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILL 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
F S ++DV+GIDEAQFF+D L D CR+ A++ G VI+AGLD D+ FG + +
Sbjct: 61 -FTS----EIDVVGIDEAQFFDDGLIDVCRQLANN-GIRVIIAGLDMDFKGNPFGPMPQL 114
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQ 259
+AD V+K+ A C CG A F+ R + K L+G + Y P+CR+ Y+ +
Sbjct: 115 CAIADEVSKVHAICVKCGDLASFSHRTVKNDKQVLLGETAEYEPLCRECYLRAR 168
>gi|390961647|ref|YP_006425481.1| thymidine kinase [Thermococcus sp. CL1]
gi|390519955|gb|AFL95687.1| thymidine kinase [Thermococcus sp. CL1]
Length = 193
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++RI+ +T R A+ K D RY D +V H+G++
Sbjct: 4 PGGFLEVITGPMFAGKTTELIKRIERQTFAKRKAALFKPAIDNRYSEDEVVAHNGLRYEA 63
Query: 136 CALTT-LSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
++T R+ DVIGIDE QFF D+ E AD +G VI +GL+ D
Sbjct: 64 FVVSTDEDGVRRIVEITRKGNYDVIGIDEVQFFPMDIVGALEELAD-EGVYVIASGLNLD 122
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIY 247
+ F +++ AD++ LTA C CGK A + R + ++ L+GGS+ Y
Sbjct: 123 FKAEPFPVTKELLVRADNIVYLTAVCTVCGKPATRSQRLIDGKPAPRDSPVILVGGSESY 182
Query: 248 MPVCRQHY 255
CR H+
Sbjct: 183 EARCRGHH 190
>gi|418413303|ref|ZP_12986545.1| thymidine kinase [Staphylococcus epidermidis BVS058A4]
gi|410879190|gb|EKS27041.1| thymidine kinase [Staphylococcus epidermidis BVS058A4]
Length = 199
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVSIVENLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFEPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|255038142|ref|YP_003088763.1| thymidine kinase [Dyadobacter fermentans DSM 18053]
gi|254950898|gb|ACT95598.1| Thymidine kinase [Dyadobacter fermentans DSM 18053]
Length = 201
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT L+R + + + + K D RY ++IV+H+ +P
Sbjct: 16 TGWIEVICGSMFSGKTEELIRLLNRARIARQRIQIFKPALDKRYHEENIVSHNDNSIPSI 75
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + SD +V+GIDEAQFF E + C + A+ GK VIVAGLD DY+
Sbjct: 76 PVQSSQQI-----SDLAQDCEVVGIDEAQFFDEGILAVCDQLAN-SGKRVIVAGLDMDYM 129
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++ +A+ VTK+ A C CG+ A + R + + L+G +D Y CR+ +
Sbjct: 130 GKPFGCMPQLMAIAEYVTKVHAVCMVCGEVASHSYRLSPSNERVLLGETDHYEARCRRCF 189
Query: 256 VSGQVVVE 263
G+ E
Sbjct: 190 NLGEKATE 197
>gi|212696061|ref|ZP_03304189.1| hypothetical protein ANHYDRO_00597 [Anaerococcus hydrogenalis DSM
7454]
gi|212676690|gb|EEB36297.1| hypothetical protein ANHYDRO_00597 [Anaerococcus hydrogenalis DSM
7454]
Length = 215
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 57 PPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNK 116
P L S+ +N+ A + V G MF+GKTT+L R + G K +
Sbjct: 5 PILNSMFRKNMKKNAKLI-------VHTGSMFSGKTTSLWRELYRMKIAGYKTVAFKPSV 57
Query: 117 DTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-----LY 171
D+R+ + IV+HD ++L + ++ F +Q+D IGIDE QFF D +
Sbjct: 58 DSRHEDEKIVSHDNLELDAIKINSIKDI---FEYSKNNQIDAIGIDEVQFFPDDPSEIVN 114
Query: 172 DFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR 231
F + H T++V+GLD DY R F V +++P+AD + K A C CG+ A+ + R
Sbjct: 115 YFIKLMNSH--ITIVVSGLDMDYKARPFEIVKELMPIADELIKHHAICASCGEDAWVSFR 172
Query: 232 KTEETKTELIGGSDIYMPVCRQHY 255
K+ IG D Y P+CR Y
Sbjct: 173 KSYNEDRIEIGAQDSYQPLCRSCY 196
>gi|326389248|ref|ZP_08210816.1| Thymidine kinase [Thermoanaerobacter ethanolicus JW 200]
gi|345016591|ref|YP_004818944.1| thymidine kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940163|ref|ZP_10305807.1| thymidine kinase [Thermoanaerobacter siderophilus SR4]
gi|325994611|gb|EGD53035.1| Thymidine kinase [Thermoanaerobacter ethanolicus JW 200]
gi|344031934|gb|AEM77660.1| Thymidine kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291913|gb|EIW00357.1| thymidine kinase [Thermoanaerobacter siderophilus SR4]
Length = 193
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I IVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEAIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S + D +VI IDE QFF+ + D RE AD GK VI AGLD D+
Sbjct: 69 VVKASEIIELLEEDT----EVIAIDEIQFFDHSIVDVVREIADL-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG DI+ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGPTPDIMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>gi|393781736|ref|ZP_10369930.1| thymidine kinase [Bacteroides salyersiae CL02T12C01]
gi|392676340|gb|EIY69778.1| thymidine kinase [Bacteroides salyersiae CL02T12C01]
Length = 199
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 7/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDVRYSEADVVSHDSNTISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L + C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSSLIEVCNQLAN-NGIRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPGLCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
>gi|340355730|ref|ZP_08678406.1| thymidine kinase [Sporosarcina newyorkensis 2681]
gi|339622138|gb|EGQ26669.1| thymidine kinase [Sporosarcina newyorkensis 2681]
Length = 198
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
VS G + VI G MF+GK+ L+RRI+ + +AV K D RY +++V+HDG
Sbjct: 3 VSMQGGWMEVICGSMFSGKSEELIRRIRRAEFAKQKIAVFKPAIDDRYSEEAVVSHDGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + + + + D DV+ IDEAQFF E++ D AD G VI+AGLD
Sbjct: 63 MIANPIARAN----EIPNLVTDDFDVVAIDEAQFFDEEILDVAISLADR-GFRVIIAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG + ++ +A+ VTKL A C CG + T R + L+G S+
Sbjct: 118 QDFRGEPFGPMPRLMAVAELVTKLQAVCTVCGSPSSRTQRLIDGNPARYDDPIILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CRQH+
Sbjct: 178 AYEPRCRQHH 187
>gi|383788520|ref|YP_005473089.1| thymidine kinase [Caldisericum exile AZM16c01]
gi|381364157|dbj|BAL80986.1| thymidine kinase [Caldisericum exile AZM16c01]
Length = 193
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 101/189 (53%), Gaps = 13/189 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI G MF+GK+ L+RRI+ + V V K + DTRY + +V+H G K+
Sbjct: 6 GKIEVITGCMFSGKSEELIRRIKRAKIARQKVQVFKPSIDTRYSVVEVVSHAGEKVEAIP 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ +K D V+GIDEAQFF+ D+ D R + GK VIVAGLD D+
Sbjct: 66 VSGTKELLEKVEEDTA----VVGIDEAQFFDKDITDALRRLSKL-GKRVIVAGLDMDFRG 120
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
FG + I+ +AD V KL A C CG+ A T R E K + +IG S+ Y
Sbjct: 121 EPFGPMPFIMAIADEVLKLHAICTVCGEEATMTQRLINGEPAKYDDPIIMIGASESYEAR 180
Query: 251 CR-QHYVSG 258
C+ HYV G
Sbjct: 181 CKLHHYVKG 189
>gi|387789601|ref|YP_006254666.1| thymidine kinase [Solitalea canadensis DSM 3403]
gi|379652434|gb|AFD05490.1| thymidine kinase [Solitalea canadensis DSM 3403]
Length = 191
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GKT L+RR++ V + K D RY ++V+HD +
Sbjct: 15 GSIEVICGPMFSGKTEELIRRLKRAQIAKLKVEIFKPATDIRYDATAVVSHDLNSIQSTP 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ T S+ VIGIDEAQFF+D L + C A+ G VIVAGLD D+
Sbjct: 75 IETSSAILL-----LSSNTQVIGIDEAQFFDDELPNVCATLANK-GIRVIVAGLDMDFKG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FG + ++ +A+ VTK+TA C CG A + R E +T L+G + Y P CR
Sbjct: 129 NPFGPIPKLMAVAEFVTKITAVCVRCGAPASHSYRLVERQETFLLGEKESYEPRCR 184
>gi|350267976|ref|YP_004879283.1| thymidine kinase [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349600863|gb|AEP88651.1| thymidine kinase [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 195
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY D++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDHRYSEDAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DVI +DE QFF E++ AD G VI AGLD
Sbjct: 61 --TSMTSYAISSAADIWDHISESTDVIAVDEVQFFDEEIVAVLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V I+ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPSIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|310831150|ref|YP_003969793.1| putative thymidine kinase [Cafeteria roenbergensis virus BV-PW1]
gi|309386334|gb|ADO67194.1| putative thymidine kinase [Cafeteria roenbergensis virus BV-PW1]
Length = 188
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 102/183 (55%), Gaps = 13/183 (7%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
++++I+GPMF+GKT+ ++++ + N IK D RY IV+HD +K+PC ++
Sbjct: 2 KLYLIIGPMFSGKTSFIIKKFNS-----NNTLAIKPIIDNRYNTKEIVSHDNIKIPCMSI 56
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
+ L S K +++ I IDE QFFED+ F ++ + +A L+GD+ R+
Sbjct: 57 SNLCSLINKID---FNEFKNIIIDEGQFFEDIDKFINMIENYH-INIYIAALNGDFNRQP 112
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET---KTEL-IGGSDIYMPVCRQH 254
F + ++ AD + +C FC ++ F+L+ + T +++ +GGS+ Y PVC
Sbjct: 113 FKIISNLYARADEIFFKQGKCYFCDNKSSFSLKFNKNTNYLNSQIDVGGSEKYHPVCGNC 172
Query: 255 YVS 257
Y++
Sbjct: 173 YIN 175
>gi|420166562|ref|ZP_14673246.1| thymidine kinase [Staphylococcus epidermidis NIHLM088]
gi|394233569|gb|EJD79170.1| thymidine kinase [Staphylococcus epidermidis NIHLM088]
Length = 199
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGELAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|300771399|ref|ZP_07081275.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762069|gb|EFK58889.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33861]
Length = 192
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 7/189 (3%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVT 127
H+ + + G I VI G MF+GKT L+RR++ NV + K + D RY +V+
Sbjct: 6 HNFGARRATYGSIEVICGSMFSGKTEELIRRLKRAQFAKLNVEIFKPSVDIRYDEQRVVS 65
Query: 128 HDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVI 186
HD + ++ S+ +D V+GIDEAQFF+D L + C + A+ G VI
Sbjct: 66 HDQNSISSTPVSNSSAILL-LSADT----RVVGIDEAQFFDDELPNVCVQLANK-GLRVI 119
Query: 187 VAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDI 246
VAGLD D+ + FG + I+ +A+ VTK+ A C CG A ++ R T K L+G +
Sbjct: 120 VAGLDMDFKGKPFGPIPAIMAVAEHVTKVHAVCVRCGAPANYSYRLTNNDKQVLLGEKES 179
Query: 247 YMPVCRQHY 255
Y P CR Y
Sbjct: 180 YEPRCRSCY 188
>gi|345884567|ref|ZP_08835971.1| hypothetical protein HMPREF0666_02147 [Prevotella sp. C561]
gi|345042560|gb|EGW46656.1| hypothetical protein HMPREF0666_02147 [Prevotella sp. C561]
Length = 589
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 52 MVSPRP-PLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVA 110
M PR +F++ + + G I VI G MF+GKT L+RR++ + V
Sbjct: 1 MTIPRNLSIFAITMAKIDNHNGERRRQGRIEVICGSMFSGKTEELIRRMKRAKFAKQKVE 60
Query: 111 VIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-ED 169
+ K + DTRY + +V+HD + + + S SD +DV+GIDEAQF E
Sbjct: 61 IFKPSIDTRYSDEDVVSHDQNSIHSTPIDS-SGNILLLASD----IDVVGIDEAQFLDEG 115
Query: 170 LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFT 229
L + C + A ++G VIVAGLD DY FG + + +AD VTK+ A C CG A+ +
Sbjct: 116 LTEVCNKLA-YNGVRVIVAGLDMDYKGVPFGPIPALCAIADEVTKVHAICVKCGALAYVS 174
Query: 230 LRKTEETKTELIGGSDIYMPVCRQHY 255
R + + ++G Y P+CR+ Y
Sbjct: 175 HRLIADNRRVMLGEQQEYEPLCRECY 200
>gi|327314453|ref|YP_004329890.1| thymidine kinase [Prevotella denticola F0289]
gi|326944689|gb|AEA20574.1| thymidine kinase [Prevotella denticola F0289]
Length = 200
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+HD +P
Sbjct: 15 GRIEVICGSMFSGKTEELIRRMKRAEFARQKVEIFKPSIDTRYSDEDVVSHDRNTIPSTP 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + SD +DV+GIDEAQF E L + C A++ G VI+AGLD DY
Sbjct: 75 IDSSGNI-LLLASD----IDVVGIDEAQFLDEGLTEVCNRLANN-GVRVIIAGLDMDYKG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + + ++G Y P+CR Y
Sbjct: 129 VPFGPIPALCAIADEVTKVHAICVKCGSLAYVSHRLIADERRVMLGEQQEYEPLCRACY 187
>gi|443693903|gb|ELT95171.1| hypothetical protein CAPTEDRAFT_55599, partial [Capitella teleta]
Length = 196
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 24/199 (12%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPC 135
+G IH+I+GPMFAGKT+ L+ + + VI + R+ + IVTH ++ P
Sbjct: 2 NGSIHLILGPMFAGKTSRLINEVNDAKKADLECVVITHDDSHRFSTRTEIVTHALMRCPA 61
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF----EDLYDFCREAADHDGKTVIVAGLD 191
+L +LS + + D+I IDE QFF ++L +FC A+ G V+VAGL
Sbjct: 62 ISLASLSEVPRDL---LVNPPDLIAIDEGQFFSQEEDELLNFCEMMANM-GVRVVVAGLS 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGK--RAFFTLRKT-------------EET 236
G + R F ++ IIP A+ +T L +RC C + +A FT R +E
Sbjct: 118 GTFHRTPFWDLLKIIPCAEEITHLNSRCSSCVEEYKAVFTQRTVPILSDEEVQQLDEKEY 177
Query: 237 KTELIGGSDIYMPVCRQHY 255
K LIGG + Y P CR+ +
Sbjct: 178 KRSLIGGEESYAPCCRRCW 196
>gi|325859615|ref|ZP_08172748.1| thymidine kinase [Prevotella denticola CRIS 18C-A]
gi|325482895|gb|EGC85895.1| thymidine kinase [Prevotella denticola CRIS 18C-A]
Length = 200
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 97/180 (53%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+HD +P
Sbjct: 14 QGRIEVICGSMFSGKTEELIRRMKRAEFARQKVEIFKPSIDTRYSDEDVVSHDRNTIPST 73
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + SD +DV+GIDEAQF E L + C A++ G VI+AGLD DY
Sbjct: 74 PIDSSGNI-LLLASD----IDVVGIDEAQFLDEGLTEVCNRLANN-GVRVIIAGLDMDYK 127
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + + ++G Y P+CR Y
Sbjct: 128 GVPFGPIPALCAIADEVTKVHAICVKCGSLAYVSHRLIADERRVMLGEQQEYEPLCRACY 187
>gi|242399572|ref|YP_002994997.1| Thymidine kinase [Thermococcus sibiricus MM 739]
gi|242265966|gb|ACS90648.1| Thymidine kinase [Thermococcus sibiricus MM 739]
Length = 196
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKT+ L++RI+ + R A+ K + D RY D +V H+G+
Sbjct: 7 PEGFLEVITGPMFAGKTSELIKRIERQIFAKRKAALFKPSIDNRYSEDKLVAHNGLSYEA 66
Query: 136 CAL-TTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
+ TT + + + +VIGIDE QFF + + + AD +G VI +GL+ D
Sbjct: 67 FVIPTTEEGVKMIYQKTKKEGFEVIGIDEVQFFPMSIVEILDKLAD-EGIYVIASGLNLD 125
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIY 247
+ +F +++ +AD++ LTA C CG+ A T R ++ L+GG + Y
Sbjct: 126 FKGDAFEVTKELLAMADNIVYLTAICSVCGREATRTQRLINGKPAPRDSPRILVGGMEAY 185
Query: 248 MPVCRQHYV 256
CR+H++
Sbjct: 186 EARCRKHHI 194
>gi|386715909|ref|YP_006182233.1| thymidine kinase [Halobacillus halophilus DSM 2266]
gi|384075466|emb|CCG46961.1| thymidine kinase [Halobacillus halophilus DSM 2266]
Length = 208
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 10/189 (5%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG + VI G MF+GK+ L+RR++ T V V K D RY D++V+H+G
Sbjct: 5 VMKQSGWVEVICGSMFSGKSEELIRRVRRATFGNLTVRVYKPAVDDRYKEDAVVSHNGTS 64
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ L +D ++VD++GIDE QFF++ E G VI AGLD
Sbjct: 65 V----LARPMKESLDILNDVGEEVDIVGIDEVQFFDEHIVEVAECLADRGIRVITAGLDT 120
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDI 246
D+ FG + +++ L++S+TKL A C CG A T R + L+G S+
Sbjct: 121 DFRGEPFGKMPEMMALSESITKLNAICPICGSPASRTQRLIDGKPASYHDPIILVGASES 180
Query: 247 YMPVCRQHY 255
Y P CR H+
Sbjct: 181 YEPRCRHHH 189
>gi|358053645|ref|ZP_09147381.1| thymidine kinase [Staphylococcus simiae CCM 7213]
gi|357256832|gb|EHJ07153.1| thymidine kinase [Staphylococcus simiae CCM 7213]
Length = 199
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+SS R+ D D VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 66 --VNISSAREIMMHDLSD-VDVIGIDEVQFFDDEIVNIAERLSSDGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLIDGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|433460001|ref|ZP_20417637.1| thymidine kinase [Halobacillus sp. BAB-2008]
gi|432192117|gb|ELK49030.1| thymidine kinase [Halobacillus sp. BAB-2008]
Length = 208
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG + +I G MF+GK+ L+RR++ T V V K D RY D++V+H+G
Sbjct: 3 VMKQSGWVELICGSMFSGKSEELIRRVRRATFGHLTVRVYKPAIDNRYKEDAVVSHNGTS 62
Query: 133 LPCCAL-TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
+ + ++L+ + D VDV+GIDE QFF++ E G VIVAGLD
Sbjct: 63 IMARPIESSLAILKH-----VTDDVDVVGIDEIQFFDEHIVEVVECLADRGIRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
D+ FG + +++ L++SVTKL A C CG A T R + + L+G S+
Sbjct: 118 TDFRGEPFGKMPELMALSESVTKLNAICPVCGSPASRTQRLIDGEPASYDDPIILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 SYEPRCRHHH 187
>gi|345433314|dbj|BAK69314.1| thymidine kinase [Bacillus caldovelox]
Length = 207
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + VI G MF+GK+ L+RR++ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLEVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----ATDVVAIDEVQFFSDDIIDVVQTLADC-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|297588390|ref|ZP_06947033.1| thymidine kinase [Finegoldia magna ATCC 53516]
gi|297573763|gb|EFH92484.1| thymidine kinase [Finegoldia magna ATCC 53516]
Length = 210
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ V G MF+GKT++L + + NV V K D+RY + +VTHD ++
Sbjct: 6 GKLIVHTGSMFSGKTSSLWKEVNRFKIAKYNVVVFKPKMDSRYSKEKVVTHDKNEIEAIN 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKTVIVAGLDGDY 194
+ + + + +D V+VI IDE QF D + ++ G T+I AGLD DY
Sbjct: 66 VDNIDDIVE--YTKTHD-VNVIAIDEVQFINSKADHFVKQINYLLEKGFTIIAAGLDMDY 122
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F V +++P+ D V K A C CG A+ + R +++ +G S+ YMP+CR+H
Sbjct: 123 KAKPFQLVKELLPICDYVEKHHAVCAVCGNDAWVSYRISDDKNRIKLGASEAYMPLCRKH 182
Query: 255 YVS 257
Y+
Sbjct: 183 YIE 185
>gi|325270827|ref|ZP_08137417.1| thymidine kinase [Prevotella multiformis DSM 16608]
gi|324986838|gb|EGC18831.1| thymidine kinase [Prevotella multiformis DSM 16608]
Length = 199
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 10/191 (5%)
Query: 66 NLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI 125
NL+ E G I VI G MF+GKT L+RR++ + V + K + DTRY + +
Sbjct: 6 NLNGE---RRRQGRIEVICGSMFSGKTEELIRRMKRAKFARQKVEIFKPSIDTRYSDEDV 62
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKT 184
V+HD + + + S +DV+GIDEAQF +D L D C + A++ G
Sbjct: 63 VSHDQNTIHSTPIDSSGSIPLLAAG-----IDVVGIDEAQFLDDGLVDVCNQLANN-GVR 116
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI+AGLD DY FG + + +AD VTK+ A C CG A+ + R + + ++G
Sbjct: 117 VIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICVKCGALAYVSHRLVADDRRVMLGEQ 176
Query: 245 DIYMPVCRQHY 255
Y P+CR Y
Sbjct: 177 QEYEPLCRACY 187
>gi|313665079|ref|YP_004046950.1| thymidine kinase [Mycoplasma leachii PG50]
gi|392388903|ref|YP_005907312.1| thymidine kinase [Mycoplasma leachii 99/014/6]
gi|312949226|gb|ADR23822.1| thymidine kinase [Mycoplasma leachii PG50]
gi|339276548|emb|CBV67127.1| Thymidine kinase [Mycoplasma leachii 99/014/6]
Length = 209
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S+ G I +I G MFAGKT +RR++ + + V K + D RY +++I++H
Sbjct: 10 EAYNSNKMGWIELITGCMFAGKTEEFIRRLKVLSYAKKRVLAFKPSIDNRYSVENIISHS 69
Query: 130 GVKLPCCALTTLSSFRQKF-GSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIV 187
G KL + + +Q + QVDVIGIDE QFF E++ D + AD+ G VIV
Sbjct: 70 GSKLDSYLVKSSDEIKQIVEKENQIQQVDVIGIDEVQFFDENVVDIVEQLADN-GIIVIV 128
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELI 241
GLD D+ F +V ++ A+ VTKL ARC CG A + R + L+
Sbjct: 129 NGLDKDFRGLPFKNVDKLLVKAEFVTKLRARCHLCGSFANRSQRIVNGQPALWNSPLILV 188
Query: 242 GGSDIYMPVCRQHYVS 257
G + Y CR+ +++
Sbjct: 189 DGKESYEARCRKCFIA 204
>gi|145591635|ref|YP_001153637.1| thymidine kinase [Pyrobaculum arsenaticum DSM 13514]
gi|145283403|gb|ABP50985.1| Thymidine kinase [Pyrobaculum arsenaticum DSM 13514]
Length = 185
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
VIVGPMFAGKTT L+RR++ G+ V K + D RY + H+G+K +
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGKRAIVFKPSIDARYDSSKVAAHNGLKFGAYVVPPD 63
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
+ + G D DV+ +DE QFF L D A DG+ VI AGL+ D+ F
Sbjct: 64 EAGVEAIGKLGLDY-DVVAVDEIQFFPPSLADVLNGLA--DGRVVIAAGLNLDFRGEPFE 120
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVCRQH 254
+ + + AD V LTA C+ CG+ A T R ++ L+GG D Y CR+H
Sbjct: 121 TTMRTMAFADRVISLTAVCKVCGRPATRTQRLINGLPAPRDSPRILVGGGDSYEARCRRH 180
Query: 255 YV 256
YV
Sbjct: 181 YV 182
>gi|240102565|ref|YP_002958874.1| thymidine kinase [Thermococcus gammatolerans EJ3]
gi|239910119|gb|ACS33010.1| Thymidine kinase (tdk) [Thermococcus gammatolerans EJ3]
Length = 194
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 9/189 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++RI+ + R VA+ K + DTRY + +V H+G++
Sbjct: 3 PGGFLEVITGPMFAGKTTELIKRIERQAFARRKVALFKPSIDTRYSKEEVVAHNGLRYEA 62
Query: 136 CALTT-LSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
+ T + R+ + + +VIGIDE QFF ++ D AD +G VI +GL+ D
Sbjct: 63 FVVPTDENGVRRIMETTIREGFEVIGIDEVQFFPIEIVDVLNRLAD-EGVYVIASGLNLD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIY 247
+ F +++ AD++ LTA C CG+ A + R + + L+GG + Y
Sbjct: 122 FKGDPFPVTRELLVRADNIVYLTAVCTVCGRPATRSQRLIDGKPAPRNSPVILVGGRESY 181
Query: 248 MPVCRQHYV 256
CR+H++
Sbjct: 182 EARCREHHI 190
>gi|372223208|ref|ZP_09501629.1| thymidine kinase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 214
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPQVDTRYDEEMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRL-----LADGCDVVGIDEAQFFDDEIVSVCNDLANK-GIRVVVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK+ + K L+G ++ Y P+ R +
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKSSDDKLVLLGETEEYEPLSRAAFF 187
Query: 257 SGQVVVEAARIVLESQKV 274
+ + ++ ++++++
Sbjct: 188 KAMLREKVKKMDVQAEEI 205
>gi|261420785|ref|YP_003254467.1| thymidine kinase [Geobacillus sp. Y412MC61]
gi|297531580|ref|YP_003672855.1| thymidine kinase [Geobacillus sp. C56-T3]
gi|319768455|ref|YP_004133956.1| thymidine kinase [Geobacillus sp. Y412MC52]
gi|261377242|gb|ACX79985.1| Thymidine kinase [Geobacillus sp. Y412MC61]
gi|297254832|gb|ADI28278.1| Thymidine kinase [Geobacillus sp. C56-T3]
gi|317113321|gb|ADU95813.1| Thymidine kinase [Geobacillus sp. Y412MC52]
Length = 207
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + VI G MF+GK+ L+RR++ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLEVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----ATDVVAIDEVQFFSDDIIDVVQTLAD-GGCRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|406672624|ref|ZP_11079849.1| hypothetical protein HMPREF9700_00391 [Bergeyella zoohelcum CCUG
30536]
gi|405587168|gb|EKB60896.1| hypothetical protein HMPREF9700_00391 [Bergeyella zoohelcum CCUG
30536]
Length = 198
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S SG + VI G MF+GKT L+RR++ G++V + K DTRY + +V+H+ K+
Sbjct: 10 SKQSGWMEVICGSMFSGKTEELIRRLRRAEMAGQSVEIFKPKLDTRYSEEDVVSHNRNKI 69
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
P A+ T GS+ DV+GIDEAQFF E + + + A+ G V++AGLD
Sbjct: 70 PSTAVETPDEILL-LGSNC----DVVGIDEAQFFDESIVEVANQLAN-SGVRVVIAGLDM 123
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D++ R FG + ++ A+ VTK+ A C+ G A +++R + +G ++ Y V R
Sbjct: 124 DFMGRPFGPMPFLMATAEYVTKVHAICKRTGNLANYSMRTSTSKDLVELGETESYEAVSR 183
Query: 253 QHYV 256
+ +V
Sbjct: 184 RVFV 187
>gi|321313256|ref|YP_004205543.1| thymidine kinase [Bacillus subtilis BSn5]
gi|320019530|gb|ADV94516.1| thymidine kinase [Bacillus subtilis BSn5]
Length = 195
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY S+V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEASVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DVI +DE QFF +++ + AD G VI AGLD
Sbjct: 61 --TSMTSYAISSAADIWDHISESTDVIAVDEVQFFDQEIVEVLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +I+ +A+SVTKL A C CG A T R + + L+G ++
Sbjct: 118 MDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|384177352|ref|YP_005558737.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|386760359|ref|YP_006233576.1| thymidine kinase [Bacillus sp. JS]
gi|428281333|ref|YP_005563068.1| thymidine kinase [Bacillus subtilis subsp. natto BEST195]
gi|430758228|ref|YP_007207776.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449096159|ref|YP_007428650.1| thymidine kinase [Bacillus subtilis XF-1]
gi|291486290|dbj|BAI87365.1| thymidine kinase [Bacillus subtilis subsp. natto BEST195]
gi|349596576|gb|AEP92763.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|384933642|gb|AFI30320.1| thymidine kinase [Bacillus sp. JS]
gi|430022748|gb|AGA23354.1| Thymidine kinase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449030074|gb|AGE65313.1| thymidine kinase [Bacillus subtilis XF-1]
Length = 195
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY ++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DVI +DE QFF +++ + AD G VI AGLD
Sbjct: 61 --TSMTSYAISSAADIWDHISESTDVIAVDEVQFFDQEIVEVLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +I+ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|299141365|ref|ZP_07034502.1| thymidine kinase [Prevotella oris C735]
gi|298577325|gb|EFI49194.1| thymidine kinase [Prevotella oris C735]
Length = 194
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 13 GRIEVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDQNSIHSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SD +DV+GIDEAQF +D L D C E A+ G VI+AGLD D+
Sbjct: 73 IDASGAILL-LASD----IDVVGIDEAQFLDDNLVDVCNELANR-GIRVIIAGLDMDFKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + ++G Y P+CR Y
Sbjct: 127 VPFGPIPALCAIADEVTKVHAICVKCGALAYVSHRLVADEHRVMLGEQSEYEPLCRACY 185
>gi|86134587|ref|ZP_01053169.1| Thymidine kinase [Polaribacter sp. MED152]
gi|85821450|gb|EAQ42597.1| Thymidine kinase [Polaribacter sp. MED152]
Length = 219
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+H+ ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAVDTRYDEEEVVSHNDSRIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S+ R + VDV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPVSSNIRL-----LANDVDVVGIDEAQFFDDEIVAVCNDLANR-GVRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++ A+ VTK+ A C G A ++ RK + ++G + Y P+ R Y
Sbjct: 128 KPFGPMPALMATAEYVTKVHAVCTHTGNLAHYSFRKAQNDNLVMLGETQEYEPLSRAAY 186
>gi|399028520|ref|ZP_10729745.1| thymidine kinase [Flavobacterium sp. CF136]
gi|398073858|gb|EJL65018.1| thymidine kinase [Flavobacterium sp. CF136]
Length = 196
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYHDEMVVSHDANEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A ++ Q DVIGIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIAILAQG--------CDVIGIDEAQFFDDEIVTVCNDLANQ-GIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A ++ RKT+ K ++G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKTDNDKLVMLGETEEYEPLSRA 184
Query: 254 HYVSG 258
Y +
Sbjct: 185 AYFNA 189
>gi|327310755|ref|YP_004337652.1| thymidine kinase [Thermoproteus uzoniensis 768-20]
gi|326947234|gb|AEA12340.1| Thymidine kinase [Thermoproteus uzoniensis 768-20]
Length = 192
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 83 IVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLS 142
IVGPMFAGKTT L+RR++ + GR+ AV K + D+RY S+ H+G++L +
Sbjct: 5 IVGPMFAGKTTELIRRVERQIIAGRSAAVFKPSIDSRYDALSVAAHNGLRLKAFVVPPDE 64
Query: 143 SFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH--DGKTVIVAGLDGDYLRRSFG 200
S + ++ DV+ +DE QFF EA D G+ VI AGL+ DY F
Sbjct: 65 SGVAAIAEEG-ERYDVVAVDEVQFFP---PSLAEALDRLAYGRLVIAAGLNLDYRGEPFE 120
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVCRQH 254
+ + I+ AD V LTA C+ CG+ A T R + L+GG + Y CR+H
Sbjct: 121 TTMRIMAYADKVVSLTAVCKVCGRPATRTQRLIGGRPAPADGPRILVGGGETYEARCRRH 180
Query: 255 YV 256
++
Sbjct: 181 HI 182
>gi|120437676|ref|YP_863362.1| thymidine kinase [Gramella forsetii KT0803]
gi|117579826|emb|CAL68295.1| thymidine kinase [Gramella forsetii KT0803]
Length = 215
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ +NV + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFAKQNVEIFKPAIDTRYDEEMVVSHDSNEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S+ R D DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPSASNIRL-----LADGCDVVGIDEAQFFDDEIVTVCNDLANR-GVRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + +++ A+ VTK+ A C G A F+ RK +G ++ Y P+ R Y
Sbjct: 128 NPFGPMPNLMATAEYVTKVHAVCTRTGNLAQFSYRKAINDDLVFLGENEEYEPLSRAAY 186
>gi|304383624|ref|ZP_07366083.1| thymidine kinase [Prevotella marshii DSM 16973]
gi|304335148|gb|EFM01419.1| thymidine kinase [Prevotella marshii DSM 16973]
Length = 200
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI G MF+GKT L+RR++ + V + K D RY + +V+HD + C
Sbjct: 13 GRLEVICGSMFSGKTEELIRRLKRAKFARQKVEIFKPAIDNRYSEEDVVSHDRHAIHCTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S +DV+GIDEAQFF+D L C A + G VI+AGLD D+
Sbjct: 73 IDSSASILLLSSD-----IDVVGIDEAQFFDDNLVSICNRLA-YRGVRVIIAGLDMDFKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + K L+G Y P+CR+ Y
Sbjct: 127 VPFGPMPALCAIADEVTKVHAICVKCGALAYVSHRTVDNEKRVLLGEQSEYEPLCRECY 185
>gi|340349591|ref|ZP_08672599.1| thymidine kinase [Prevotella nigrescens ATCC 33563]
gi|445115035|ref|ZP_21378108.1| thymidine kinase [Prevotella nigrescens F0103]
gi|339610716|gb|EGQ15562.1| thymidine kinase [Prevotella nigrescens ATCC 33563]
gi|444840530|gb|ELX67560.1| thymidine kinase [Prevotella nigrescens F0103]
Length = 202
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 14 QGRIEVICGSMFSGKTEELIRRLRRAKFARQKVEIFKPAIDVRYSEEDVVSHDKNAIHST 73
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + SD +DV+GIDEAQF E L D C + A+ +G VIVAGLD DY
Sbjct: 74 PINSSGNI-LLLASD----IDVVGIDEAQFLDEGLVDICNQLAN-NGVRVIVAGLDMDYK 127
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + +IG Y P+CR+ Y
Sbjct: 128 GVPFGPIPALCAIADQVTKVHAICVKCGALAYASHRLVPDEHRVMIGEQAEYEPLCRECY 187
>gi|363540105|ref|YP_004894407.1| mg356 gene product [Megavirus chiliensis]
gi|448825307|ref|YP_007418238.1| thymidine kinase [Megavirus lba]
gi|350611270|gb|AEQ32714.1| thymidine kinase [Megavirus chiliensis]
gi|371943643|gb|AEX61471.1| thymidine kinase [Megavirus courdo7]
gi|425701234|gb|AFX92396.1| thymidine kinase [Megavirus courdo11]
gi|444236492|gb|AGD92262.1| thymidine kinase [Megavirus lba]
Length = 222
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 115/206 (55%), Gaps = 14/206 (6%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-----IVTHDGVKLP 134
I I+GPMF+GKTT +R + + G+ +IK +D R+ + I+TH+ ++
Sbjct: 3 ITTIIGPMFSGKTTEFIRLVDRKKIAGKRCLIIKHIRDDRFEKNDSEEKHIITHNQIRYK 62
Query: 135 CCALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
C + ++ F S+ ++ + DV+G++E FF+D+ +FC E A+++ + VIV+ +
Sbjct: 63 NCDIVYSNNL---FNSNFFELITTNYDVVGVEEGFFFDDVANFCNELANNNIE-VIVSTI 118
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTELIGGSDIYMP 249
D + + F + +I ++++V KL A C C A FT+R + L+GGSDIY
Sbjct: 119 DSSFKQEIFQEIGKLIAISENVIKLKAVCMKCKINDASFTIRTVDNDNEILVGGSDIYQS 178
Query: 250 VCRQHYVSGQVVVEAARIVLESQKVQ 275
VCR + ++ + +I+ + +K++
Sbjct: 179 VCRNCLNNNRLDKKENKILGKRKKIE 204
>gi|333029787|ref|ZP_08457848.1| Thymidine kinase [Bacteroides coprosuis DSM 18011]
gi|332740384|gb|EGJ70866.1| Thymidine kinase [Bacteroides coprosuis DSM 18011]
Length = 209
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 98/182 (53%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I G MF+GKT L+RR++ + V + K D+RY +V+HD +
Sbjct: 24 GRIEIICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPTVDSRYSQCDVVSHDKNYINSTP 83
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SS VDV+GIDEAQFF+ + D C E A+ G VIVAGLD D+
Sbjct: 84 VDSSSSI-----LLLASDVDVVGIDEAQFFDLGIVDVCNELANM-GIRVIVAGLDMDFKG 137
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG+ A ++ R K L+G ++ Y P+CR+ Y+
Sbjct: 138 TPFGPIPHLCAIADEVSKVHAICVKCGQLALYSHRTVNCNKQVLLGETERYEPLCRKCYL 197
Query: 257 SG 258
Sbjct: 198 KA 199
>gi|345433310|dbj|BAK69312.1| thymidine kinase [Bacillus caldolyticus]
Length = 207
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + VI G MF+GK+ L+RR++ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLEVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----ATDVVAIDEIQFFSDDIIDVVQTLADC-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|327403144|ref|YP_004343982.1| Thymidine kinase [Fluviicola taffensis DSM 16823]
gi|327318652|gb|AEA43144.1| Thymidine kinase [Fluviicola taffensis DSM 16823]
Length = 191
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S + +G I VI G MF+GKT L+RR++ + + + K D RY + +V+H G
Sbjct: 8 SEARQNGWIEVICGSMFSGKTEELIRRLKRVEFAQQKLILFKPAIDNRYHEEQVVSHKGS 67
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGL 190
L + S + + + ++ IDEAQFF+ L C A G VI+AGL
Sbjct: 68 SLEAIPVKDSSEIIKHWKKER-----IVAIDEAQFFDAGLVQVCANLAKQ-GVRVIIAGL 121
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
D DYL + FG + D++ +A+ VTK+ A C CG A ++ R T++ L+G + Y P+
Sbjct: 122 DMDYLGKPFGPMPDLLCMAEYVTKVHAICVSCGNLAQYSHRTTKDEGQVLVGAVEKYEPL 181
Query: 251 CRQHY 255
CR Y
Sbjct: 182 CRSCY 186
>gi|146298349|ref|YP_001192940.1| thymidine kinase [Flavobacterium johnsoniae UW101]
gi|146152767|gb|ABQ03621.1| Thymidine kinase [Flavobacterium johnsoniae UW101]
Length = 194
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAIDTRYHDEMVVSHDANEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A +S Q DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANISILAQG--------CDVVGIDEAQFFDDEIVTVCNDLANR-GVRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A ++ RKT+ K ++G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKTDNDKLVMLGETEEYEPLSRA 184
Query: 254 HYVSG 258
Y +
Sbjct: 185 AYFNA 189
>gi|363582487|ref|ZP_09315297.1| thymidine kinase [Flavobacteriaceae bacterium HQM9]
Length = 192
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +++V+HD ++
Sbjct: 14 GWIEVISGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDTRYSEENVVSHDNNEIASTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF E + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANIRI-----LADTCDVVGIDEAQFFDEGIVRVCNDLANK-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A ++ RK+ + ++G SD Y P+ R +
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCAKTGNLAHYSHRKSTDENLVMLGESDAYEPLSRAAF 186
>gi|167038493|ref|YP_001666071.1| thymidine kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167038764|ref|YP_001661749.1| thymidine kinase [Thermoanaerobacter sp. X514]
gi|300913651|ref|ZP_07130968.1| Thymidine kinase [Thermoanaerobacter sp. X561]
gi|307723334|ref|YP_003903085.1| Thymidine kinase [Thermoanaerobacter sp. X513]
gi|320116889|ref|YP_004187048.1| Thymidine kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687577|sp|B0K1F4.1|KITH_THEPX RecName: Full=Thymidine kinase
gi|238687642|sp|B0K7G9.1|KITH_THEP3 RecName: Full=Thymidine kinase
gi|166853004|gb|ABY91413.1| Thymidine kinase [Thermoanaerobacter sp. X514]
gi|166857327|gb|ABY95735.1| Thymidine kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300890336|gb|EFK85481.1| Thymidine kinase [Thermoanaerobacter sp. X561]
gi|307580395|gb|ADN53794.1| Thymidine kinase [Thermoanaerobacter sp. X513]
gi|319929980|gb|ADV80665.1| Thymidine kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 193
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + D +VI IDE QFF+ + D RE AD GK VI AGLD D+
Sbjct: 69 VVKAFEIIELLEEDT----EVIAIDEIQFFDHSIVDVVREIADL-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG D++ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGPTPDVMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>gi|325846457|ref|ZP_08169372.1| thymidine kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481215|gb|EGC84256.1| thymidine kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 201
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
V G MF+GKTT+L R + G K + D+R+ + IV+HD ++L + ++
Sbjct: 9 VHTGSMFSGKTTSLWRELYRMKIAGYKTVAFKPSVDSRHEDEKIVSHDNLELDAIKINSI 68
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFED----LYD-FCREAADHDGKTVIVAGLDGDYLR 196
F +Q+D IGIDE QFF D + D F + H T++V+GLD DY
Sbjct: 69 KDI---FEYSKNNQIDAIGIDEVQFFPDDPSEIVDYFIKLMNSH--ITIVVSGLDMDYKA 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R F V +++P+AD + K A C CG+ A+ + RK+ IG D Y P+CR Y
Sbjct: 124 RPFEIVKELMPIADELIKHHAICASCGEDAWVSFRKSYNEDRIEIGAQDSYQPLCRSCY 182
>gi|288929636|ref|ZP_06423480.1| thymidine kinase [Prevotella sp. oral taxon 317 str. F0108]
gi|288329141|gb|EFC67728.1| thymidine kinase [Prevotella sp. oral taxon 317 str. F0108]
Length = 202
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MF+GKT L+RR++ + V + K DTR+ D +V+HD + C
Sbjct: 18 QGRVEVICGSMFSGKTEELIRRMKRAVFAKQRVEIFKPAIDTRFSEDDVVSHDRNAIHCT 77
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + ++ +D +DV+GIDEAQF E L C E A+ G VIVAGLD D+
Sbjct: 78 PVDSSAAILL-LSAD----IDVVGIDEAQFMDEGLVPVCNELANR-GVRVIVAGLDMDFK 131
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R E K ++G Y P+CR Y
Sbjct: 132 GVPFGPMPALCAIADHVTKVHAICVKCGALAYVSHRIVEGEKRVMLGEMQEYEPLCRHCY 191
>gi|303237004|ref|ZP_07323576.1| thymidine kinase [Prevotella disiens FB035-09AN]
gi|302482784|gb|EFL45807.1| thymidine kinase [Prevotella disiens FB035-09AN]
Length = 203
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 14 QGRIEVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDKNAIHST 73
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + SD +DV+GIDEAQF E L D C + A+ +G VIVAGLD D+
Sbjct: 74 PINSSGNILL-LASD----IDVVGIDEAQFLDEGLIDICNQLAN-NGVRVIVAGLDMDFK 127
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + ++G Y P+CR+ Y
Sbjct: 128 GIPFGPIPALCAIADQVTKVHAICVKCGALAYVSHRLVDNNHRVMLGEQLEYEPLCRECY 187
>gi|281423597|ref|ZP_06254510.1| thymidine kinase [Prevotella oris F0302]
gi|281402417|gb|EFB33248.1| thymidine kinase [Prevotella oris F0302]
Length = 194
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 13 GRIEVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDQNSIHSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + SD +DV+GIDEAQF +D L D C E A+ G VI+AGLD D+
Sbjct: 73 IDASGAILL-LASD----IDVVGIDEAQFLDDNLVDVCNELANR-GIRVIIAGLDMDFKG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + ++G Y P+CR Y
Sbjct: 127 VPFGPIPALCAIADEVTKVHAICVKCGALAYVSHRLVADEHRVMLGEQAEYEPLCRACY 185
>gi|390959123|ref|YP_006422880.1| thymidine kinase [Terriglobus roseus DSM 18391]
gi|390414041|gb|AFL89545.1| thymidine kinase [Terriglobus roseus DSM 18391]
Length = 215
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 4/181 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI GPMF+GK+ L+RR++ + V+ K + D RY +I +H
Sbjct: 17 GVLEVITGPMFSGKSEELIRRLKRARIARQRVSCFKPDIDLRYHRTAIASHSEQTHEAAV 76
Query: 138 LT-TLSSFRQK-FGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDY 194
+T R++ F + D+V+VIG+DE QFF++ + E GK VI+AGLD +
Sbjct: 77 VTPNAERLREELFATRLVDRVEVIGLDEVQFFDNAILPLAMELVSM-GKRVILAGLDTTF 135
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
FG V ++ LAD VTKL A C CG+ A T R + ++G + +Y CR H
Sbjct: 136 ANEPFGPVPALMALADKVTKLNAVCMTCGQPAIHTQRLGHSQELVVVGAAGMYEARCRAH 195
Query: 255 Y 255
+
Sbjct: 196 F 196
>gi|288802985|ref|ZP_06408421.1| thymidine kinase [Prevotella melaninogenica D18]
gi|288334502|gb|EFC72941.1| thymidine kinase [Prevotella melaninogenica D18]
Length = 199
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+HD +
Sbjct: 14 QGRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPSIDTRYSDEDVVSHDQNSIHST 73
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + SD +DV+GIDEAQF E L D C + A+ +G VIVAGLD D+
Sbjct: 74 PIDSSGNILL-LASD----IDVVGIDEAQFLDEGLTDICNKLAN-NGVRVIVAGLDMDFK 127
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + + ++G Y P+CR+ Y
Sbjct: 128 GVPFGPIPALCAIADEVTKVHAICVKCGALAYVSHRLIADDRRVMLGEQQEYEPLCRECY 187
>gi|381187076|ref|ZP_09894641.1| thymidine kinase [Flavobacterium frigoris PS1]
gi|379650686|gb|EIA09256.1| thymidine kinase [Flavobacterium frigoris PS1]
Length = 197
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY D +V+HD ++ A
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYHDDMVVSHDANEIRSTA 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ + DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANI-----AILAQGCDVVGIDEAQFFDDEIVKICNDLANQ-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A ++ RKT+ K ++G ++ Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKTDSDKLVMLGETEEYEPLSRAAY 186
>gi|295136430|ref|YP_003587106.1| thymidine kinase [Zunongwangia profunda SM-A87]
gi|294984445|gb|ADF54910.1| thymidine kinase [Zunongwangia profunda SM-A87]
Length = 215
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ +NV + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQNVEIFKPAVDTRYDEEMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S+ R D DV+GIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPSASNIRL-----LADGCDVVGIDEAQFFDDEIVSVCNDLANR-GIRVVVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + +++ A+ VTK+ A C G A ++ RK +G ++ Y P+ R Y
Sbjct: 128 NPFGPMPNLMATAEYVTKVHAVCTRTGNLAQYSYRKAINDDLVFLGETEEYEPLSRAAY 186
>gi|18313354|ref|NP_560021.1| thymidine kinase [Pyrobaculum aerophilum str. IM2]
gi|73920108|sp|Q8ZV53.1|KITH_PYRAE RecName: Full=Thymidine kinase
gi|18160882|gb|AAL64203.1| thymidine kinase [Pyrobaculum aerophilum str. IM2]
Length = 185
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
VIVGPMFAGKTT L+RR++ GR V K + D RY + H+G+K +
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGRRAIVFKPSLDVRYDASKVAAHNGLKFDAFVIPPD 63
Query: 142 S---SFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+K G+ + DV+ +DE QFF DL D + A +G+ VI AGL+ D+
Sbjct: 64 KDGVEIIRKMGA----EYDVVAVDEIQFFPVDLADALNQLA--NGRIVIAAGLNLDFRGE 117
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVC 251
F + + AD V L+A C+ CGK A T R + LIGG++ Y C
Sbjct: 118 PFETTARAMAFADRVISLSAVCKLCGKPATRTQRLINGVPAPRHSPRILIGGNESYEARC 177
Query: 252 RQHYV 256
R+HYV
Sbjct: 178 RRHYV 182
>gi|297566613|ref|YP_003685585.1| thymidine kinase [Meiothermus silvanus DSM 9946]
gi|296851062|gb|ADH64077.1| Thymidine kinase [Meiothermus silvanus DSM 9946]
Length = 203
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 14/197 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I V+VGPMF+GK+ L+RR++ G+ V V K D RY +V+HDG ++
Sbjct: 8 AGWIEVVVGPMFSGKSEELIRRVKRALIAGQTVMVFKPRLDDRYHASDVVSHDGKRIEAL 67
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ S + + +V+ +DEAQFF+ L E A H G VIV GLD D+
Sbjct: 68 SVADSSELSRNLPNPLP---EVVAVDEAQFFDPGLVKLLLELA-HQGVRVIVGGLDMDFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG + +++ A+ + KLTA C CG A T R + L+G + Y P
Sbjct: 124 AEPFGIMPELLARAEYIEKLTAVCPVCGAPATRTQRLVNGQPARFDDPVILVGAHEAYEP 183
Query: 250 VCRQHYVSGQVVVEAAR 266
CR+ +V VV E +R
Sbjct: 184 RCRKCHV---VVREPSR 197
>gi|340352924|ref|ZP_08675757.1| thymidine kinase [Prevotella pallens ATCC 700821]
gi|339611944|gb|EGQ16760.1| thymidine kinase [Prevotella pallens ATCC 700821]
Length = 199
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 14 QGRIEVICGSMFSGKTEELIRRLRRAKFAKQKVEIFKPAIDVRYSEEEVVSHDKNAIHST 73
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + SD +DV+GIDEAQF E L D C + A+ +G VIVAGLD DY
Sbjct: 74 PINSSGNILL-LASD----IDVVGIDEAQFLDEGLVDICNQLAN-NGVRVIVAGLDMDYK 127
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R ++G Y P+CR+ Y
Sbjct: 128 GIPFGPIPALCAIADQVTKVHAICVKCGALAYVSHRLVPNEHRVMLGEQTEYEPLCRECY 187
>gi|15806982|ref|NP_295707.1| thymidine kinase [Deinococcus radiodurans R1]
gi|60390158|sp|Q9RSY5.1|KITH_DEIRA RecName: Full=Thymidine kinase
gi|6459773|gb|AAF11536.1|AE002036_7 thymidine kinase [Deinococcus radiodurans R1]
Length = 212
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + V+VGPMF+GK+ L+RR+ + VAV K D RY + +H G L
Sbjct: 8 GGHLEVVVGPMFSGKSEELIRRLTRSLIARQRVAVFKPAIDNRYHASEVASHAGRTLEAV 67
Query: 137 ALTTLSSFRQKFG------SDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAG 189
A+ + R + S A + VDVIGIDEAQFF +L E AD G V++AG
Sbjct: 68 AVPDAQAIRAQLSGQGELLSAAPEGVDVIGIDEAQFFGPELVPLVLELADA-GVRVVLAG 126
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGG 243
LD D+ FGS+ +++ A+SV KLTA C CG A T R LIGG
Sbjct: 127 LDLDFRAEPFGSMPELLARAESVDKLTAICTVCGAPATRTQR--------LIGG 172
>gi|256751363|ref|ZP_05492242.1| Thymidine kinase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749745|gb|EEU62770.1| Thymidine kinase [Thermoanaerobacter ethanolicus CCSD1]
Length = 193
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNIYAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + D +VI IDE QFF+ + D RE AD GK VI AGLD D+
Sbjct: 69 VVKAFEIIELLEEDT----EVIAIDEIQFFDHSIVDVVREIADL-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG D++ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGPTPDVMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>gi|345433316|dbj|BAK69315.1| thymidine kinase [Geobacillus thermocatenulatus]
Length = 207
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + VI G MF+GK+ L+RR++ + V V K D RY D +V+H+G
Sbjct: 3 VMTQSGWLEVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDEVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----TTDVVAIDEVQFFSNDIIDVVQTLAD-GGCRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLEAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|373855336|ref|ZP_09598082.1| Thymidine kinase [Bacillus sp. 1NLA3E]
gi|372454405|gb|EHP27870.1| Thymidine kinase [Bacillus sp. 1NLA3E]
Length = 206
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG + VI G MF+GK+ L+RR++ + + V K D RY +++V+H+G
Sbjct: 3 VMKQSGWVEVICGSMFSGKSEELIRRVRRSQFAKQKIVVFKPKIDNRYSKEAVVSHNGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
++ + Q + +VDVI IDE QFF+ D+ + + A + G VI AGLD
Sbjct: 63 FIAIPISHSNDIFQYIDA----EVDVIAIDEVQFFDKDIVNVIQNLA-YSGYRVITAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG + ++ +A+ VTKL A C CG A T R L+G S+
Sbjct: 118 QDFRGEPFGQMPALLSIAEQVTKLQAVCSVCGSPASRTQRLINGNPASYHDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|313676337|ref|YP_004054333.1| thymidine kinase [Marivirga tractuosa DSM 4126]
gi|312943035|gb|ADR22225.1| Thymidine kinase [Marivirga tractuosa DSM 4126]
Length = 192
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 7/175 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
I +I G MF+GKT L+RR+ + + + K DTRY +V+H+ K+ +
Sbjct: 19 IELICGSMFSGKTEELIRRLNRALIAKQKIEIFKPKLDTRYDESEVVSHNKTKIRSTPVD 78
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
G+ +V+GIDEAQFF+ ++ + AD GK VI+AGLD D+ ++
Sbjct: 79 FAEDILLFSGNS-----EVVGIDEAQFFDAEIVNVVNTLADQ-GKRVIIAGLDMDFSGKA 132
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
FGS+ +++ +A+ VTK+ A C CG A ++ R +EE + ++G D Y P CR+
Sbjct: 133 FGSMPELMAIAEYVTKVHAICVKCGGIASYSYRLSEEKQKVMLGEKDKYEPRCRK 187
>gi|300774543|ref|ZP_07084406.1| thymidine kinase [Chryseobacterium gleum ATCC 35910]
gi|300506358|gb|EFK37493.1| thymidine kinase [Chryseobacterium gleum ATCC 35910]
Length = 195
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 7/184 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S SG + VI G MF+GKT L+RR++ G+NV + K D RY + +V+H+ K+
Sbjct: 10 SKQSGWMEVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDVRYSEEDVVSHNQNKI 69
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
A+ + DV+GIDEAQFF E + D + A+ G V++AGLD
Sbjct: 70 RSTAVENPNEILL-----LASNCDVVGIDEAQFFDESIVDIANQLAN-SGIRVVIAGLDM 123
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+L R FG + +++ A+ VTK+ A C+ G A +++R ++ +G ++ Y V R
Sbjct: 124 DFLGRPFGPMPNLMATAEYVTKVHAICKRTGNLANYSMRISQGDNLVELGETESYEAVSR 183
Query: 253 QHYV 256
+ ++
Sbjct: 184 RVFI 187
>gi|169824412|ref|YP_001692023.1| thymidine kinase [Finegoldia magna ATCC 29328]
gi|167831217|dbj|BAG08133.1| thymidine kinase [Finegoldia magna ATCC 29328]
Length = 210
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 6/184 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G++ V G MF+GKT++L + + NV V K D+RY + +VTHD ++
Sbjct: 5 KGKLIVHTGSMFSGKTSSLWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAI 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKTVIVAGLDGD 193
+ + + + +D V+VI IDE QF D + ++ G T+I AGLD D
Sbjct: 65 NVDNIDDIVE--YTKTHD-VNVIAIDEIQFINSKADHFVKQINYLLEKGFTIIAAGLDMD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y + F V +++P+ D V K A C CG A+ + R +++ +G ++ YMP+CR+
Sbjct: 122 YKAKPFQLVKELLPICDYVEKHHAVCAVCGNDAWVSYRISDDKNRIQLGANEAYMPLCRK 181
Query: 254 HYVS 257
HY+
Sbjct: 182 HYIE 185
>gi|223043940|ref|ZP_03613981.1| thymidine kinase [Staphylococcus capitis SK14]
gi|314934188|ref|ZP_07841549.1| thymidine kinase [Staphylococcus caprae C87]
gi|417906649|ref|ZP_12550430.1| thymidine kinase [Staphylococcus capitis VCU116]
gi|222442655|gb|EEE48759.1| thymidine kinase [Staphylococcus capitis SK14]
gi|313653093|gb|EFS16854.1| thymidine kinase [Staphylococcus caprae C87]
gi|341597651|gb|EGS40197.1| thymidine kinase [Staphylococcus capitis VCU116]
Length = 199
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+HDG ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+S+ R+ D D VDVIGIDE QFF+ E +G V+VAGLD D+
Sbjct: 67 ---NISTSREILNQD-LDDVDVIGIDEVQFFDGEIVNIVEQLAKNGHRVVVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFEPMPKLLAVSEQVTKLQAVCAVCGSPSSRTQRLINGEPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|374326648|ref|YP_005084848.1| thymidine kinase [Pyrobaculum sp. 1860]
gi|356641917|gb|AET32596.1| Thymidine kinase [Pyrobaculum sp. 1860]
Length = 192
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
VIVGPMFAGKTT L+RR++ GR V K + D+RY + H+G++ +
Sbjct: 11 VIVGPMFAGKTTELIRRVERHVIAGRRAVVFKPSIDSRYDASKVAAHNGLRFGAVVVPPS 70
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
+ G + DV+ +DE QFF L + A +G+ VI AGL+ D+ F
Sbjct: 71 EEGVEAIGKMGVEY-DVVAVDEIQFFPVQLAEVLNSLA--NGRVVIAAGLNLDFRGEPFE 127
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVCRQH 254
+ ++ AD V LTA C+ CG+ A T R ++ L+GG D Y CR+H
Sbjct: 128 TTARVMAYADRVISLTAVCKVCGRPATRTQRLVNGVPAPRDSPRILVGGGDSYEARCRRH 187
Query: 255 YVS 257
+V+
Sbjct: 188 FVN 190
>gi|335427735|ref|ZP_08554655.1| thymidine kinase [Haloplasma contractile SSD-17B]
gi|335429174|ref|ZP_08556076.1| thymidine kinase [Haloplasma contractile SSD-17B]
gi|334890254|gb|EGM28526.1| thymidine kinase [Haloplasma contractile SSD-17B]
gi|334893661|gb|EGM31870.1| thymidine kinase [Haloplasma contractile SSD-17B]
Length = 196
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+ G I VI G MFAGKT L+RRI+ +N+ V K D RY + +V+H+G +
Sbjct: 4 TGKDGWIEVISGSMFAGKTEELIRRIKRLEYAKKNILVFKPEIDNRYSDEDVVSHNGTSI 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
+ D DV+ IDE QFF E + ADH G V+VAGLD
Sbjct: 64 KSIVIKCAKEIINYID----DHTDVVAIDEVQFFDESVVQVVDYLADH-GIRVVVAGLDR 118
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDI 246
D+ SFG++ +++ A+ VTKLTA C CG A T R T L+G +
Sbjct: 119 DFRGESFGTMPELLTKAEFVTKLTAICTKCGAPATRTQRLVNHTPASYYDPIVLVGAKES 178
Query: 247 YMPVCRQ-HYVSGQ 259
Y P CR H V+ +
Sbjct: 179 YEPRCRHCHIVTNK 192
>gi|433450162|ref|ZP_20412523.1| thymidine kinase [Mycoplasma sp. G5847]
gi|431933974|gb|ELK20528.1| thymidine kinase [Mycoplasma sp. G5847]
Length = 209
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA + G I +I G MFAGKT +RR++ + + V K + D RY +++I +H
Sbjct: 10 EAYNTKKMGWIELITGCMFAGKTEEFIRRLRVLSYAKKKVLAFKPSIDNRYSVENITSHS 69
Query: 130 GVKLPCCALTTLSSFRQKFG-SDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIV 187
G KL + + +Q + QVDVIGIDE QFF E++ D E AD G VIV
Sbjct: 70 GSKLDSYLVKSSDEIKQIVNKENQIQQVDVIGIDEVQFFDENVVDVIEELADQ-GIIVIV 128
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELI 241
GLD D+ F +V ++ A+ VTKL ARC CG A + R ++ L+
Sbjct: 129 NGLDKDFRGLPFKNVDKLLVKAEFVTKLRARCHLCGSFANRSQRIVNGKPALWDSPLILV 188
Query: 242 GGSDIYMPVCRQHYVS 257
G + Y CR +++
Sbjct: 189 DGKESYEARCRNCFIA 204
>gi|417925911|ref|ZP_12569324.1| putative thymidine kinase [Finegoldia magna SY403409CC001050417]
gi|341590513|gb|EGS33751.1| putative thymidine kinase [Finegoldia magna SY403409CC001050417]
Length = 210
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ V G MF+GKT++L + + NV V K D+RY + +VTHD ++
Sbjct: 6 GKLIVHTGSMFSGKTSSLWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAIN 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKTVIVAGLDGDY 194
+ + + + +D V+VI IDE QF D + ++ G T+I AGLD DY
Sbjct: 66 VDNIDDIVE--YTKTHD-VNVIAIDEIQFINSKADHFVKQINYLLEKGFTIIAAGLDMDY 122
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F V +++P+ D V K A C CG A+ + R +++ +G ++ YMP+CR+H
Sbjct: 123 KAKPFQLVKELLPICDYVEKHHAVCAVCGNDAWVSYRISDDKNRIQLGANEAYMPLCRKH 182
Query: 255 YVS 257
Y+
Sbjct: 183 YIE 185
>gi|116622304|ref|YP_824460.1| thymidine kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116225466|gb|ABJ84175.1| Thymidine kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 205
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L+RR++ + V V K D RY D IV+H +++
Sbjct: 9 GWIEVICGPMFSGKSEELIRRLRRAMIARKRVEVFKPIIDNRYSDDEIVSHGDLRMKSQV 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ + +V+GIDEA F L D + AD GK VI++GLD DYL
Sbjct: 69 VKDAEEITRRIDW----RSEVVGIDEANFMGPQLVDVAQRLADS-GKQVIISGLDTDYLG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R F + D++ A+S+TK A C CG A T R ++G SD+Y CR+ +
Sbjct: 124 RPFAPIPDLLAHAESITKTLAICVRCGNPAKHTQRLRGSEDLIVVGASDMYEARCRRCFE 183
Query: 257 SG 258
G
Sbjct: 184 PG 185
>gi|56421915|ref|YP_149233.1| thymidine kinase [Geobacillus kaustophilus HTA426]
gi|73920100|sp|Q5KUH1.1|KITH_GEOKA RecName: Full=Thymidine kinase
gi|56381757|dbj|BAD77665.1| thymidine kinase [Geobacillus kaustophilus HTA426]
gi|345433318|dbj|BAK69316.1| thymidine kinase [Geobacillus kaustophilus]
Length = 207
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + +I G MF+GK+ L+RR++ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLELICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----ATDVVAIDEIQFFSDDIIDVVQTLADC-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|375010562|ref|YP_004984195.1| thymidine kinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448239659|ref|YP_007403717.1| thymidine kinase [Geobacillus sp. GHH01]
gi|345433312|dbj|BAK69313.1| thymidine kinase [Bacillus caldotenax]
gi|345433320|dbj|BAK69317.1| thymidine kinase [Geobacillus zalihae]
gi|359289411|gb|AEV21095.1| Thymidine kinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445208501|gb|AGE23966.1| thymidine kinase [Geobacillus sp. GHH01]
Length = 207
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + +I G MF+GK+ L+RR++ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLELICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----ATDVVAIDEIQFFSDDIIDVVQTLADC-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|228474933|ref|ZP_04059662.1| thymidine kinase [Staphylococcus hominis SK119]
gi|314935932|ref|ZP_07843282.1| thymidine kinase [Staphylococcus hominis subsp. hominis C80]
gi|418618993|ref|ZP_13181836.1| thymidine kinase [Staphylococcus hominis VCU122]
gi|228271165|gb|EEK12545.1| thymidine kinase [Staphylococcus hominis SK119]
gi|313655938|gb|EFS19680.1| thymidine kinase [Staphylococcus hominis subsp. hominis C80]
gi|374825854|gb|EHR89773.1| thymidine kinase [Staphylococcus hominis VCU122]
Length = 199
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+HDG +L
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNELEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T + S Q DVIGIDE QFF++ E DG V+VAGLD D+
Sbjct: 67 NISTAREILLQNLS----QFDVIGIDEIQFFDNEIVHIVEKLAEDGHRVVVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + I+ +++ VTKL A C CG + T R L+G ++ Y P
Sbjct: 123 EPFDPMPQIMAVSEQVTKLQAVCAICGSSSSRTQRLINGQPARIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|384161325|ref|YP_005543398.1| thymidine kinase [Bacillus amyloliquefaciens TA208]
gi|384166229|ref|YP_005547608.1| thymidine kinase [Bacillus amyloliquefaciens LL3]
gi|384170423|ref|YP_005551801.1| thymidine kinase [Bacillus amyloliquefaciens XH7]
gi|328555413|gb|AEB25905.1| thymidine kinase [Bacillus amyloliquefaciens TA208]
gi|328913784|gb|AEB65380.1| thymidine kinase [Bacillus amyloliquefaciens LL3]
gi|341829702|gb|AEK90953.1| thymidine kinase [Bacillus amyloliquefaciens XH7]
Length = 196
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + D AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIDDLSMLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V D++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPDLMAVAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|225550554|ref|ZP_03771503.1| thymidine kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
gi|225379708|gb|EEH02070.1| thymidine kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
Length = 223
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
+ S G I +I GPMFAGKT L+RR+ V K DTR +I + G
Sbjct: 6 AFSKKVGWIELITGPMFAGKTAELIRRLHRLEYADVKYLVFKPRIDTR-STQNIKSRTGT 64
Query: 132 KLPCCALTTLSSFRQKFGSDAYD-QVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
LP + SD +D ++ VIGIDE QFF+D +G VI++GL
Sbjct: 65 SLPSIEVENAPEILSYIMSDNFDNEIKVIGIDEVQFFDDRICEVANILAENGFVVIISGL 124
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
D ++ FG + + AD +TKLTA C CG A +LRK + + + IG
Sbjct: 125 DKNFKDEPFGPIAKLFAYADKITKLTAICNECGAEATHSLRKIDGKYANYDDEIVKIGCQ 184
Query: 245 DIYMPVCRQHY 255
+ Y VCR H+
Sbjct: 185 EFYSAVCRHHH 195
>gi|374599474|ref|ZP_09672476.1| Thymidine kinase [Myroides odoratus DSM 2801]
gi|423324622|ref|ZP_17302463.1| hypothetical protein HMPREF9716_01820 [Myroides odoratimimus CIP
103059]
gi|373910944|gb|EHQ42793.1| Thymidine kinase [Myroides odoratus DSM 2801]
gi|404607879|gb|EKB07370.1| hypothetical protein HMPREF9716_01820 [Myroides odoratimimus CIP
103059]
Length = 203
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDTRYHDEYVVSHDSNEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ T S R DV+GIDEAQFF+D + + C E A+ G VIVAGLD D+
Sbjct: 74 VPTADSIRLLASG-----CDVVGIDEAQFFDDEIVNVCNELAN-SGIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK ++G ++ Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLAHYSYRKAASDAIVMLGETEEYEPLSRAAYY 187
Query: 257 SG 258
+
Sbjct: 188 NA 189
>gi|16080759|ref|NP_391587.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221311667|ref|ZP_03593514.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315995|ref|ZP_03597800.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320906|ref|ZP_03602200.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221325190|ref|ZP_03606484.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402777869|ref|YP_006631813.1| thymidine kinase [Bacillus subtilis QB928]
gi|452912629|ref|ZP_21961257.1| thymidine kinase [Bacillus subtilis MB73/2]
gi|729902|sp|Q03221.2|KITH_BACSU RecName: Full=Thymidine kinase
gi|405819|gb|AAA02902.1| thymidine kinase [Bacillus subtilis]
gi|853771|emb|CAA89879.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|2636231|emb|CAB15723.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|402483048|gb|AFQ59557.1| Thymidine kinase [Bacillus subtilis QB928]
gi|407962549|dbj|BAM55789.1| thymidine kinase [Bacillus subtilis BEST7613]
gi|407966562|dbj|BAM59801.1| thymidine kinase [Bacillus subtilis BEST7003]
gi|452117657|gb|EME08051.1| thymidine kinase [Bacillus subtilis MB73/2]
Length = 195
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY ++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DV+ +DE QFF +++ + AD G VI AGLD
Sbjct: 61 --TSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +I+ +A+SVTKL A C CG A T R + + L+G ++
Sbjct: 118 MDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|73662074|ref|YP_300855.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|109892498|sp|Q49Z66.1|KITH_STAS1 RecName: Full=Thymidine kinase
gi|72494589|dbj|BAE17910.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 199
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY D IV+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T + + S +VDVIGIDE QFFE+ E G VI AGLD D+
Sbjct: 67 NISTAAEILKHDLS----EVDVIGIDEVQFFENGIVHIAEQLAEKGHRVITAGLDMDFRA 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
+ F + ++ +++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 123 QPFEPMPQLMAVSEDVTKLQAVCAVCGASSSRTQRLIDGNPAKIDDPVILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|223478775|ref|YP_002582930.1| thymidine kinase [Thermococcus sp. AM4]
gi|214034001|gb|EEB74827.1| Thymidine kinase [Thermococcus sp. AM4]
Length = 194
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 15/192 (7%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++RI+ + R VA+ K + DTRY + +V H+G++
Sbjct: 3 PGGFLEVITGPMFAGKTTELIKRIERQAFARRKVALFKPSIDTRYSTEEVVAHNGLRYEA 62
Query: 136 CALTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGL 190
+ T ++S + + Y +VIG+DE QFF ++ + + AD DG VI +GL
Sbjct: 63 FVVPTNGDGVASIMETTIREKY---EVIGVDEVQFFPMEIVEVLDKLAD-DGVYVIASGL 118
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
+ D+ F + +++ AD++ LTA C CG+ A + R + + L+GG
Sbjct: 119 NLDFKGDPFPVMKELLVRADNIVYLTAVCTVCGRPATRSQRLIDGKPAPRNSPVILVGGR 178
Query: 245 DIYMPVCRQHYV 256
+ Y CR+H++
Sbjct: 179 ESYEARCREHHI 190
>gi|418031065|ref|ZP_12669550.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351472124|gb|EHA32237.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 192
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY ++V+H+G
Sbjct: 4 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNG------ 57
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DV+ +DE QFF +++ + AD G VI AGLD
Sbjct: 58 --TSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADK-GYRVIAAGLD 114
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +I+ +A+SVTKL A C CG A T R + + L+G ++
Sbjct: 115 MDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAE 174
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 175 SYEARCRHHH 184
>gi|319650899|ref|ZP_08005035.1| thymidine kinase [Bacillus sp. 2_A_57_CT2]
gi|317397392|gb|EFV78094.1| thymidine kinase [Bacillus sp. 2_A_57_CT2]
Length = 206
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + G + VI G MF+GK+ L+RR++ + +AV K D RY +++V+H+G
Sbjct: 3 VMNHHGWVEVICGSMFSGKSEELIRRVRRAQFAKQQIAVFKPQIDNRYSDEAVVSHNGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLD 191
+ ++ + + +D +D+I IDE QFF+D + + AD G VI AGLD
Sbjct: 63 VIARPISQSTDIFKYITAD----IDLIAIDEVQFFDDEIVKVIQHLAD-SGHRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG + I+ +A+ VTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGQMPAIMSIAELVTKLQAVCAVCGSPASRTQRLINGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|302345185|ref|YP_003813538.1| thymidine kinase [Prevotella melaninogenica ATCC 25845]
gi|302150082|gb|ADK96344.1| thymidine kinase [Prevotella melaninogenica ATCC 25845]
Length = 199
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+HD +
Sbjct: 15 GRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPSIDTRYSDEDVVSHDQNSIHSTP 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + SD +DV+GIDEAQF E L D C + A++ G VIVAGLD D+
Sbjct: 75 IDSSGNILL-LASD----IDVVGIDEAQFLDEGLTDICNKLANN-GVRVIVAGLDMDFKG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + + ++G Y P+CR Y
Sbjct: 129 IPFGPIPALCAIADEVTKVHAICVKCGALAYVSHRLIADDRRVMLGEQQEYEPLCRDCY 187
>gi|239617833|ref|YP_002941155.1| thymidine kinase [Kosmotoga olearia TBF 19.5.1]
gi|239506664|gb|ACR80151.1| Thymidine kinase [Kosmotoga olearia TBF 19.5.1]
Length = 188
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ +IVGPM++GKT+ LL ++ + + V K DTRY +D +V+H G K+P
Sbjct: 3 GKLTLIVGPMYSGKTSELLSLVEIYSLGKKKYLVFKPEIDTRYSVDHVVSHTGQKVPAIT 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ + S +KF D +++D I IDE FF+ + G V GLD Y R
Sbjct: 63 IPSASKLLEKF-DDINEKLDAIFIDEVHFFDIDIIDVIKKIILKGVDVFCVGLDMSYKHR 121
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTEL-IGGSDIYMPVCRQHY 255
F + ++ +AD V K A C CG+ +A + + + +E+ +GG + Y+ VCR+ Y
Sbjct: 122 PFQTTASLMAIADEVIKKKAVCHVCGEYKAVVSHKTVNNSGSEIDVGGMEKYIAVCRECY 181
Query: 256 V 256
+
Sbjct: 182 L 182
>gi|308175434|ref|YP_003922139.1| thymidine kinase [Bacillus amyloliquefaciens DSM 7]
gi|307608298|emb|CBI44669.1| thymidine kinase [Bacillus amyloliquefaciens DSM 7]
Length = 196
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + D AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIDDLSMLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V D++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPDLMAVAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|403068633|ref|ZP_10909965.1| thymidine kinase [Oceanobacillus sp. Ndiop]
Length = 206
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ T +V V K D RY ++V+H+G
Sbjct: 7 SGWVEVICGSMFSGKSEELIRRVRRATYAHLSVRVFKPAIDDRYEETAVVSHNGTSTIAR 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S+ VD++GIDE QFF E++ + E A+ G VI AGLD D+
Sbjct: 67 PIDKSIEILDHIDSN----VDIVGIDEVQFFDENVVEIAEELANR-GIRVIAAGLDTDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG V ++ L++SVTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GEPFGPVPKLMSLSESVTKLNAICPVCGSPASRTQRLINGKPASYDDPIILVGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|171920596|ref|ZP_02695615.2| thymidine kinase [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|185178727|ref|ZP_02554498.2| thymidine kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188024357|ref|ZP_02570580.2| thymidine kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188518424|ref|ZP_02556522.2| thymidine kinase [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188524219|ref|ZP_02557636.2| thymidine kinase [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195867402|ref|ZP_03079406.1| thymidine kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|198273584|ref|ZP_03206120.1| thymidine kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|209554193|ref|YP_002285049.1| thymidine kinase [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225551407|ref|ZP_03772353.1| thymidine kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
gi|238056555|sp|B5ZCA9.1|KITH_UREU1 RecName: Full=Thymidine kinase
gi|171903306|gb|EDT49595.1| thymidine kinase [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|184209328|gb|EDU06371.1| thymidine kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188018623|gb|EDU56663.1| thymidine kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188998199|gb|EDU67296.1| thymidine kinase [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|195660006|gb|EDX53386.1| thymidine kinase [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195660878|gb|EDX54131.1| thymidine kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|198250104|gb|EDY74884.1| thymidine kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|209541694|gb|ACI59923.1| thymidine kinase [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225379222|gb|EEH01587.1| thymidine kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
Length = 223
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
+ S G I +I GPMFAGKT L+RR+ V K DTR +I + G
Sbjct: 6 AFSKKVGWIELITGPMFAGKTAELIRRLHRLEYADVKYLVFKPRIDTR-STQNIKSRTGT 64
Query: 132 KLPCCALTTLSSFRQKFGSDAYD-QVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
LP + SD +D ++ VIGIDE QFF+D +G VI++GL
Sbjct: 65 SLPSIEVENAPEILSYIMSDNFDNEIKVIGIDEVQFFDDRICEVANILAENGFVVIISGL 124
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
D ++ FG + + AD +TKLTA C CG A +LRK + + + IG
Sbjct: 125 DKNFKGEPFGPIAKLFAYADKITKLTAICNECGAEATHSLRKIDGKYANYDDEIVKIGCQ 184
Query: 245 DIYMPVCRQHY 255
+ Y VCR H+
Sbjct: 185 EFYSAVCRHHH 195
>gi|365877405|ref|ZP_09416909.1| thymidine kinase [Elizabethkingia anophelis Ag1]
gi|442587679|ref|ZP_21006494.1| thymidine kinase [Elizabethkingia anophelis R26]
gi|365754838|gb|EHM96773.1| thymidine kinase [Elizabethkingia anophelis Ag1]
gi|442562533|gb|ELR79753.1| thymidine kinase [Elizabethkingia anophelis R26]
Length = 197
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + SG + VI G MF+GKT L+RR++ G+ V + K D RY + IV
Sbjct: 3 LENTINHAKQSGWMEVICGSMFSGKTEELIRRLRRAEMAGQQVEIFKPKIDVRYSDEDIV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTV 185
+H+ K+ A+ T + GS+ DV+GIDEAQFF E + + + A+ G V
Sbjct: 63 SHNDNKIRSTAVDTPNEILL-LGSNC----DVVGIDEAQFFDESVVEVANQLANS-GTRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
++AGLD D++ R FG + +++ A+ VTK+ A C+ G A ++LR + +G +D
Sbjct: 117 VIAGLDMDFMGRPFGPMPNLMATAEYVTKVHAICKRTGNLANYSLRTSASKDLVQLGETD 176
Query: 246 IYMPVCRQHY 255
Y V R+ +
Sbjct: 177 SYEAVSRRIF 186
>gi|402495344|ref|ZP_10842074.1| thymidine kinase [Aquimarina agarilytica ZC1]
Length = 192
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 7/176 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY ++V+HD K+
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDTRYSEQNVVSHDHNKISSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF E++ C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANIRI-----LADTCDVVGIDEAQFFDEEIVGVCNDLANK-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+ FG + ++ A+ VTK+ A C G A ++ RK+ + ++G S+ Y P+ R
Sbjct: 128 QPFGPMPALMATAEYVTKVHAVCAKTGNLAHYSHRKSTDDDLVMLGESEAYEPLSR 183
>gi|395802215|ref|ZP_10481468.1| thymidine kinase [Flavobacterium sp. F52]
gi|395435456|gb|EJG01397.1| thymidine kinase [Flavobacterium sp. F52]
Length = 227
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++ P
Sbjct: 45 GWIEVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAIDTRYHDEMVVSHDANEIRSTP 104
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + Q DVIGIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 105 VPAAANIMILAQG--------CDVIGIDEAQFFDDEIITVCNDLANQ-GIRVIVAGLDMD 155
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A ++ RKT+ K ++G ++ Y P+ R
Sbjct: 156 FKGNPFGPMPGLMATAEYVTKVHAVCTRTGNLANYSFRKTDNDKLVMLGETEEYEPLSRA 215
Query: 254 HY 255
Y
Sbjct: 216 AY 217
>gi|392969021|ref|ZP_10334437.1| Thymidine kinase [Fibrisoma limi BUZ 3]
gi|387843383|emb|CCH56491.1| Thymidine kinase [Fibrisoma limi BUZ 3]
Length = 208
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I I G MF+GKT L+RR+ NV + K DTRY IV+H + +
Sbjct: 16 TGWIEAICGSMFSGKTEELIRRLNRARIAKLNVRIFKPALDTRYHEADIVSHSALSIQSI 75
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ T Q G DV+GIDEAQFF+ D+ C A+ G+ VIVAGLD D+
Sbjct: 76 PVHTAGQILQLAGD-----CDVVGIDEAQFFDKDIVAVCNTLANQ-GQRVIVAGLDMDFA 129
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + ++ +A+ VTK+ A C CG A ++ R + L+G +D Y CR+ +
Sbjct: 130 GQPFGCMPQLLSIAEYVTKVHAICVVCGDIAQYSYRLVPSQERVLLGETDSYEARCRRCF 189
Query: 256 VSGQVVVEAAR 266
G EA R
Sbjct: 190 NLGD---EAGR 197
>gi|13358159|ref|NP_078433.1| thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|170762223|ref|YP_001752679.1| thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171920507|ref|ZP_02690810.2| thymidine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|183508662|ref|ZP_02689655.2| thymidine kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|186701854|ref|ZP_02553468.2| thymidine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|38258258|sp|Q9PPP5.1|KITH_UREPA RecName: Full=Thymidine kinase
gi|189028753|sp|B1AJN5.1|KITH_UREP2 RecName: Full=Thymidine kinase
gi|11357056|pir||F82870 thymidine kinase UU594 [imported] - Ureaplasma urealyticum
gi|6899605|gb|AAF31008.1|AE002158_6 thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827800|gb|ACA33062.1| thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171902981|gb|EDT49270.1| thymidine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|182676130|gb|EDT88035.1| thymidine kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|186701150|gb|EDU19432.1| thymidine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
Length = 223
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
+ S G I +I GPMFAGKT L+RR+ V K DTR + +I + G
Sbjct: 6 AFSKKIGWIELITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTR-SIRNIQSRTGT 64
Query: 132 KLPCCALTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
LP + + S+++ D+ VIGIDE QFF+D +G VI++GL
Sbjct: 65 SLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGL 124
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGS 244
D ++ FG + + AD +TKLTA C CG A +LRK + + IG
Sbjct: 125 DKNFKGEPFGPIAKLFTYADKITKLTAICNECGAEATHSLRKIDGKHADYNDDIVKIGCQ 184
Query: 245 DIYMPVCRQHY 255
+ Y VCR H+
Sbjct: 185 EFYSAVCRHHH 195
>gi|423315889|ref|ZP_17293794.1| hypothetical protein HMPREF9699_00365 [Bergeyella zoohelcum ATCC
43767]
gi|405585605|gb|EKB59429.1| hypothetical protein HMPREF9699_00365 [Bergeyella zoohelcum ATCC
43767]
Length = 183
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 7/178 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
+ VI G MF+GKT L+RR++ G+NV + K DTRY + +V+H+ K+P A+
Sbjct: 1 MEVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDTRYSEEDVVSHNRNKIPSTAVE 60
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
T GS+ DV+GIDEAQFF E + + + A+ G V++AGLD D++ R
Sbjct: 61 TPDEILL-LGSNC----DVVGIDEAQFFDESIVEVANQLANS-GVRVVIAGLDMDFMGRP 114
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C+ G A +++R + +G ++ Y V R+ +V
Sbjct: 115 FGPMPFLMATAEYVTKVHAICKRTGNLANYSMRTSTSKDLVELGETESYEAVSRRVFV 172
>gi|260905908|ref|ZP_05914230.1| thymidine kinase [Brevibacterium linens BL2]
Length = 202
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 20/199 (10%)
Query: 73 VSSP--SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
V+SP +G + VI GPMF+GK+ L+RR++ G NV V+ + DTR L +I +H G
Sbjct: 4 VASPRQAGRLDVIAGPMFSGKSEELMRRVRRAKIAGVNVLVLSHSLDTRSTLSAITSHTG 63
Query: 131 VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAG 189
V +P + + S + ++ Y D+I IDEAQFF DL E + G TVIV G
Sbjct: 64 VNIPAVPVGDVESLAEVAHAEDY---DLIAIDEAQFFGPDLVATVFELVER-GATVIVEG 119
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR---------KTEETKTEL 240
L + F + + +A+ V KLTA C CG+ A F R +++ T++
Sbjct: 120 LSVTFDGDPFEPMPTFMAVAEDVLKLTAVCTICGRDAVFHQRVGAPGHTDDESDAPATDI 179
Query: 241 ----IGGSDIYMPVCRQHY 255
IGG + Y+ CR+H+
Sbjct: 180 DASHIGGLEAYVARCREHF 198
>gi|340617517|ref|YP_004735970.1| thymidine kinase [Zobellia galactanivorans]
gi|339732314|emb|CAZ95582.1| Thymidine kinase [Zobellia galactanivorans]
Length = 217
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 7/198 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPTVDNRYDESMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R G D DVIGIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRI-LG----DTCDVIGIDEAQFFDDEIVTVCNDLANK-GVRVVVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK+ L+G ++ Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAICTRTGNLANYSYRKSSNDNLVLLGETEEYEPLSRAAYY 187
Query: 257 SGQVVVEAARIVLESQKV 274
++ + + ++S++V
Sbjct: 188 KARLKEKVKHLNVDSEEV 205
>gi|406908306|gb|EKD48852.1| hypothetical protein ACD_64C00103G0004 [uncultured bacterium]
Length = 208
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI GPMF+GK+ L+RR++ +NVAV K D RY ++++ +H+G KLP A
Sbjct: 9 GSLEVICGPMFSGKSEELIRRLRRAEIAQQNVAVFKHAIDDRYDINNVTSHNGTKLPAHA 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYD-FCREAADHDGKTVIVAGLDGDYL 195
+ +K + Y V+GIDE F+ D+ + C A +G VI+AGLD DY
Sbjct: 69 TANGAHLLEKVQHENY---TVVGIDEVHFYTTDIINVIC--ALVENGVRVIIAGLDMDYR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTL-----RKT--EETKTELIGGSDIYM 248
FG + ++ +ADS+TKL A C CG A F+ R T + L+G D +
Sbjct: 124 GVPFGPMPTLLAIADSITKLKAICTQCGADAHFSQLLAANRPTIVNDEPLVLVGAKDKFT 183
Query: 249 PVCR 252
CR
Sbjct: 184 ARCR 187
>gi|260061408|ref|YP_003194488.1| thymidine kinase [Robiginitalea biformata HTCC2501]
gi|88785540|gb|EAR16709.1| thymidine kinase [Robiginitalea biformata HTCC2501]
Length = 217
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 13/208 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY D +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLRRAQFARQKVEIFKPIVDTRYHEDYVVSHDENEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRL-----LADNCDVVGIDEAQFFDDEIVTVCNDLANK-GVRVVVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK+ + L+G ++ Y P+ R +
Sbjct: 128 NPFGPMPALMATAEYVTKVHAICTRTGNLANYSYRKSRNDRLVLLGETEEYEPLSRGAFY 187
Query: 257 SGQVVVEAARI------VLESQKVQCGS 278
+ + +++ VL S+K + S
Sbjct: 188 KAMLTEKISKLEVNEPEVLPSKKSENAS 215
>gi|340622824|ref|YP_004741276.1| thymidine kinase [Capnocytophaga canimorsus Cc5]
gi|339903090|gb|AEK24169.1| Thymidine kinase [Capnocytophaga canimorsus Cc5]
Length = 239
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + S G I VI G MF+GKT L+RR++ + V + K DTRY +V
Sbjct: 48 LENTTNYSEKFGWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPAFDTRYDDVMVV 107
Query: 127 THDGVKL-----PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADH 180
+H+ ++ P A L + D DVIGIDEAQFF+D + C + A+
Sbjct: 108 SHNANEIRSTPVPAAANIMLLA----------DGCDVIGIDEAQFFDDEIVTVCNDLANR 157
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL 240
G VIVAGLD D+ + FG + ++ A+ VTK+ A C G A F+ RK+ L
Sbjct: 158 -GMRVIVAGLDMDFKGKPFGPMPALMATAEYVTKVHAVCTRTGNLANFSYRKSANENVFL 216
Query: 241 IGGSDIYMPVCRQHY 255
+G + Y P+ R Y
Sbjct: 217 LGEQEAYEPLSRAAY 231
>gi|260909415|ref|ZP_05916123.1| thymidine kinase [Prevotella sp. oral taxon 472 str. F0295]
gi|260636507|gb|EEX54489.1| thymidine kinase [Prevotella sp. oral taxon 472 str. F0295]
Length = 173
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR++ + V + K DTRY + +V+HD + C + + S+
Sbjct: 1 MFSGKTEELIRRMKRAVFAKQRVEIFKPAIDTRYSDEDVVSHDRNAIHCTPVDSSSAILL 60
Query: 147 KFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
+D +DV+GIDEAQF E L D C E A+ G VIVAGLD D+ FG + +
Sbjct: 61 -LSAD----IDVVGIDEAQFMDEGLVDVCNELANR-GVRVIVAGLDMDFKGVPFGPMPAL 114
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+AD VTK+ A C CG A+ + R E K LIG Y P+CR Y
Sbjct: 115 CAIADQVTKVHAICVKCGALAYVSHRIVEGEKRVLIGEMQEYEPLCRHCY 164
>gi|163754460|ref|ZP_02161582.1| phenylalanyl-tRNA synthetase alpha subunit [Kordia algicida OT-1]
gi|161325401|gb|EDP96728.1| phenylalanyl-tRNA synthetase alpha subunit [Kordia algicida OT-1]
Length = 214
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDIRYDDEKVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANIRL-----LADNCDVVGIDEAQFFDDGIVAVCNDLANK-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A ++ RK++ L+G +D Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLAQYSFRKSKSDDLVLLGETDEYEPLSRGAY 186
>gi|443243256|ref|YP_007376481.1| thymidine kinase [Nonlabens dokdonensis DSW-6]
gi|442800655|gb|AGC76460.1| thymidine kinase [Nonlabens dokdonensis DSW-6]
Length = 211
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAQQKVEIFKPAIDTRYDEEMVVSHDANEIPSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ SD V+GIDEAQFF+D + C A+ G VIVAGLD D+
Sbjct: 74 VPAAANI-PLLASDC----QVVGIDEAQFFDDEIVAVCNALANR-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RKT L+G Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLAQYSYRKTANEDVVLLGEQQEYEPLSRAAYY 187
Query: 257 SGQVVVEAARIVLESQKVQ 275
+ + I +E+++++
Sbjct: 188 KAMLSHKVKDIDVEAEEIE 206
>gi|384044287|ref|YP_005492304.1| thymidine kinase [Bacillus megaterium WSH-002]
gi|345441978|gb|AEN86995.1| Thymidine kinase [Bacillus megaterium WSH-002]
Length = 208
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG I VI G MF+GK+ L+RR++ + V K D RY +++V+H+G
Sbjct: 4 VMKQSGWIEVICGSMFSGKSEELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTS 63
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ +++ ++ ++ DV+ IDE QFF+ D+ + + AD G VIVAGLD
Sbjct: 64 VMAYSISASRDILKRVN----EETDVVAIDEVQFFDTDILEIVQSLADQ-GFRVIVAGLD 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG + ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 119 QDFKGEPFGQMPQLMAIAESVTKLQAVCASCGSPASRTQRLINGEPASYDDPIILVGASE 178
Query: 246 IYMPVCRQHYV 256
Y P CR +V
Sbjct: 179 SYEPRCRHCHV 189
>gi|315606357|ref|ZP_07881373.1| thymidine kinase [Prevotella buccae ATCC 33574]
gi|402308703|ref|ZP_10827707.1| thymidine kinase [Prevotella sp. MSX73]
gi|315252048|gb|EFU32021.1| thymidine kinase [Prevotella buccae ATCC 33574]
gi|400375154|gb|EJP28064.1| thymidine kinase [Prevotella sp. MSX73]
Length = 224
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 66 NLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI 125
NL EA G I V+ G MF+GKT L+RR++ + V + K + DTRY + I
Sbjct: 26 NLTGEAH---RPGRIEVVCGSMFSGKTEELIRRMKRAKFARQKVEIFKPSIDTRYSDEDI 82
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKT 184
V+HD + + + S +DV+GIDEAQFF+D L C + A+ G
Sbjct: 83 VSHDRTSIRSTPIDSSGSLLL-----LASDIDVVGIDEAQFFDDGLVSVCNQLANR-GVR 136
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI+AGLD D+ FG + + +AD VTK+ A C CG A+ + R + L+G
Sbjct: 137 VIIAGLDMDFQGLPFGPIPALCAIADDVTKVHAICVKCGALAYVSHRLVHNDRRVLLGEK 196
Query: 245 DIYMPVCRQHY 255
Y P+CR Y
Sbjct: 197 MEYEPLCRDCY 207
>gi|408491243|ref|YP_006867612.1| thymidine kinase [Psychroflexus torquis ATCC 700755]
gi|408468518|gb|AFU68862.1| thymidine kinase [Psychroflexus torquis ATCC 700755]
Length = 212
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY +V+HD +
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPQIDRRYDDTDVVSHDENSIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D +V+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANIRL-----LADGCEVVGIDEAQFFDDEIISVCNDLANR-GVRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + +++ A+ VTK+ A C G A ++ RK+ + L+G +D Y P+ R Y
Sbjct: 128 NPFGPMPNLMATAEYVTKVHAVCTRTGNLAQYSFRKSSKEDLVLLGETDEYEPLSRAAYF 187
Query: 257 SGQVVVEAARI 267
+ + RI
Sbjct: 188 KAMLKEKVKRI 198
>gi|322436811|ref|YP_004219023.1| thymidine kinase [Granulicella tundricola MP5ACTX9]
gi|321164538|gb|ADW70243.1| Thymidine kinase [Granulicella tundricola MP5ACTX9]
Length = 204
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+VGPMF+GK+ L+RR++ + VA K + D RY +I +H
Sbjct: 7 GRIEVVVGPMFSGKSEELIRRLKRARIARQRVACFKPDIDLRYHRTAIASHSSQTYEAVT 66
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + R++ D VDV+G+DE Q+F+ + E H GK V++AGLD +
Sbjct: 67 VANVERLREEL-YPQLDGVDVVGMDEVQWFDPSIVGLVLELV-HRGKRVVLAGLDTTFAG 124
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FGS+ ++ +AD V KL+A C CG A T R + ++G + +Y CR
Sbjct: 125 EPFGSIPQLMAIADEVAKLSAVCMVCGAPAIHTQRLGMSRELVVVGAAGMYEARCR 180
>gi|85544232|pdb|2B8T|A Chain A, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
gi|85544233|pdb|2B8T|B Chain B, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
gi|85544234|pdb|2B8T|C Chain C, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
gi|85544235|pdb|2B8T|D Chain D, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
Length = 223
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
+ S G I I GPMFAGKT L+RR+ V K DTR + +I + G
Sbjct: 6 AFSKKIGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTR-SIRNIQSRTGT 64
Query: 132 KLPCCALTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
LP + + S+++ D+ VIGIDE QFF+D +G VI++GL
Sbjct: 65 SLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGL 124
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGS 244
D ++ FG + + AD +TKLTA C CG A +LRK + + IG
Sbjct: 125 DKNFKGEPFGPIAKLFTYADKITKLTAICNECGAEATHSLRKIDGKHADYNDDIVKIGCQ 184
Query: 245 DIYMPVCRQHY 255
+ Y VCR H+
Sbjct: 185 EFYSAVCRHHH 195
>gi|150025142|ref|YP_001295968.1| thymidine kinase [Flavobacterium psychrophilum JIP02/86]
gi|149771683|emb|CAL43157.1| Thymidine kinase [Flavobacterium psychrophilum JIP02/86]
Length = 202
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+H+ ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPTIDTRYDDEMVVSHNKNEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A ++ Q DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIAILAQG--------CDVVGIDEAQFFDDEIVKICNDLAN-SGIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A ++ RKT+ K ++G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKTDNDKLVMLGETEEYEPLSRA 184
Query: 254 HYVSG 258
Y +
Sbjct: 185 AYYNA 189
>gi|302380618|ref|ZP_07269083.1| thymidine kinase [Finegoldia magna ACS-171-V-Col3]
gi|303233803|ref|ZP_07320457.1| thymidine kinase [Finegoldia magna BVS033A4]
gi|302311561|gb|EFK93577.1| thymidine kinase [Finegoldia magna ACS-171-V-Col3]
gi|302495237|gb|EFL54989.1| thymidine kinase [Finegoldia magna BVS033A4]
Length = 210
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ V G MF+GKT++L + + NV V K D+RY + +VTHD ++
Sbjct: 6 GKLIVHTGSMFSGKTSSLWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAIN 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKTVIVAGLDGDY 194
+ + + + +D V+VI IDE QF D + ++ G T+I AGLD DY
Sbjct: 66 VDNIDDIVE--YTKTHD-VNVIAIDEIQFINSKADHFVKQINYLLEKGFTIIAAGLDMDY 122
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F V +++P+ D V K A C CG A+ + R +++ +G ++ Y+P+CR+H
Sbjct: 123 KAKPFQLVKELLPICDYVEKHHAVCAVCGNDAWVSYRISDDKNRIQLGANEAYLPLCRKH 182
Query: 255 YVS 257
Y+
Sbjct: 183 YIE 185
>gi|149243935|pdb|2UZ3|A Chain A, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
gi|149243936|pdb|2UZ3|B Chain B, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
gi|149243937|pdb|2UZ3|C Chain C, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
gi|149243938|pdb|2UZ3|D Chain D, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
Length = 243
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
+ S G I I GPMFAGKT L+RR+ V K DTR + +I + G
Sbjct: 26 AFSKKIGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTR-SIRNIQSRTGT 84
Query: 132 KLPCCALTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
LP + + S+++ D+ VIGIDE QFF+D +G VI++GL
Sbjct: 85 SLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGL 144
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGS 244
D ++ FG + + AD +TKLTA C CG A +LRK + + IG
Sbjct: 145 DKNFKGEPFGPIAKLFTYADKITKLTAICNECGAEATHSLRKIDGKHADYNDDIVKIGCQ 204
Query: 245 DIYMPVCRQHY 255
+ Y VCR H+
Sbjct: 205 EFYSAVCRHHH 215
>gi|288926028|ref|ZP_06419957.1| thymidine kinase [Prevotella buccae D17]
gi|288337248|gb|EFC75605.1| thymidine kinase [Prevotella buccae D17]
Length = 202
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 66 NLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI 125
NL EA G I V+ G MF+GKT L+RR++ + V + K + DTRY + I
Sbjct: 4 NLTGEAH---RPGRIEVVCGSMFSGKTEELIRRMKRAKFARQKVEIFKPSIDTRYSDEDI 60
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKT 184
V+HD + + + S +DV+GIDEAQFF+D L C + A+ G
Sbjct: 61 VSHDRTSIRSTPIDSSGSLLLLASD-----IDVVGIDEAQFFDDGLVSVCNQLANR-GVR 114
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI+AGLD D+ FG + + +AD VTK+ A C CG A+ + R + L+G
Sbjct: 115 VIIAGLDMDFQGLPFGPIPALCAIADDVTKVHAICVKCGALAYVSHRLVHNDRRVLLGEK 174
Query: 245 DIYMPVCRQHY 255
Y P+CR Y
Sbjct: 175 MEYEPLCRDCY 185
>gi|325286093|ref|YP_004261883.1| thymidine kinase [Cellulophaga lytica DSM 7489]
gi|324321547|gb|ADY29012.1| Thymidine kinase [Cellulophaga lytica DSM 7489]
Length = 214
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPIVDTRYHEEMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRL-----LADGCDVVGIDEAQFFDDEIVTVCNDLANK-GIRVLVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK+ ++G ++ Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAICTRTGNLANYSFRKSNNDNLVMLGETEEYEPLSRAAYY 187
Query: 257 SGQVVVEAARIVLESQKVQ 275
+ + I +++++++
Sbjct: 188 KAMLKEKVKTIDVDAEQIK 206
>gi|282859353|ref|ZP_06268461.1| thymidine kinase [Prevotella bivia JCVIHMP010]
gi|424900693|ref|ZP_18324235.1| thymidine kinase [Prevotella bivia DSM 20514]
gi|282587838|gb|EFB93035.1| thymidine kinase [Prevotella bivia JCVIHMP010]
gi|388592893|gb|EIM33132.1| thymidine kinase [Prevotella bivia DSM 20514]
Length = 200
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + D RY + +V+HD +
Sbjct: 15 GRIEVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPSIDVRYSDEEVVSHDRNTIHSTP 74
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S SD ++V+GIDEAQFF E L + C A+ +G VI+AGLD D+
Sbjct: 75 IDSSESILL-LASD----IEVVGIDEAQFFDEGLINVCNTLAN-NGVRVIIAGLDMDFKG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + L+G Y P+CR Y
Sbjct: 129 VPFGPIPALCAIADDVTKVHAICVKCGALAYLSHRLVQNNHRVLLGEQGEYEPLCRDCY 187
>gi|345880919|ref|ZP_08832454.1| thymidine kinase [Prevotella oulorum F0390]
gi|343921393|gb|EGV32110.1| thymidine kinase [Prevotella oulorum F0390]
Length = 218
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 60 FSLQNRNLHSEASVSSP--SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKD 117
F L ++ E S+ G I VI G MF+GKT L+RR++ + V + K D
Sbjct: 18 FFLNFAHIMMENSIGETCRRGRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAID 77
Query: 118 TRYGLDSIVTHDGVKL------PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-L 170
RY D +V+HD + AL L++ +DV+GIDEAQFF+D L
Sbjct: 78 VRYSEDDVVSHDQNSIHSTPIDASGALMLLTA-----------DIDVVGIDEAQFFDDGL 126
Query: 171 YDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTL 230
D C A+ G VIVAGLD DY FG + + +AD VTK+ A C CG A+ +
Sbjct: 127 VDVCNALANR-GIRVIVAGLDMDYKGVPFGPMPALCAVADEVTKVHAICVKCGALAYVSH 185
Query: 231 RKTEETKTELIGGSDIYMPVCRQHY 255
R ++G Y P+CR +
Sbjct: 186 RLVANAHRVMLGEQTEYEPLCRNCF 210
>gi|193216554|ref|YP_001999796.1| thymidine kinase [Mycoplasma arthritidis 158L3-1]
gi|238692474|sp|B3PM40.1|KITH_MYCA5 RecName: Full=Thymidine kinase
gi|193001877|gb|ACF07092.1| thymidine kinase [Mycoplasma arthritidis 158L3-1]
Length = 194
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI GPMF+GK+ LL+RI+ VIK DTR+ + IV+ GVK
Sbjct: 7 EGMIEVITGPMFSGKSEELLKRIRTLEYAKLKPLVIKPEFDTRFSENEIVSRAGVKHKTH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
L ++ D Y V IDEA +F E+L + A+ G VIVAGLD +YL
Sbjct: 67 ILKNINDVYFLLQEDKYKAV---VIDEAHWFNEELVKVADDLAN-KGYLVIVAGLDQNYL 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R FG + +++ +A+ VTKL A C C A + RK ++ L+G Y CR+ +
Sbjct: 123 REPFGPIPNLLAIAERVTKLQAICVKCQHAASTSFRKVAASEINLLGDFQEYEARCRKCH 182
Query: 256 VSGQ 259
+GQ
Sbjct: 183 NAGQ 186
>gi|332291954|ref|YP_004430563.1| thymidine kinase [Krokinobacter sp. 4H-3-7-5]
gi|332170040|gb|AEE19295.1| Thymidine kinase [Krokinobacter sp. 4H-3-7-5]
Length = 219
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDTRYDEEMVVSHDANEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + D DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPMLA--------DGCDVVGIDEAQFFDDEIVQVCNDLANR-GIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + +++ A+ VTK+ A C G A ++ RK + ++G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPNLMATAEYVTKVHAVCTRTGNLAQYSYRKAQSEDIVMLGETEEYEPLSRA 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|311068883|ref|YP_003973806.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|419820476|ref|ZP_14344086.1| thymidine kinase [Bacillus atrophaeus C89]
gi|310869400|gb|ADP32875.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|388475292|gb|EIM12005.1| thymidine kinase [Bacillus atrophaeus C89]
Length = 191
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 98/187 (52%), Gaps = 16/187 (8%)
Query: 79 EIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCAL 138
++ V G MFAGK+T L+ + E+++G+ V IK D+RY D IVTHDG + +
Sbjct: 3 KLTVFTGSMFAGKSTALVEAGKKESKEGKTVLFIKPTLDSRYSDDEIVTHDGESVRAMVI 62
Query: 139 -----TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD--HDGKTVIVAGLD 191
+ F G+ DV+ DEAQFF D D +D +GKTV VAGL+
Sbjct: 63 DHDTQMGMHDFFTIMGA------DVVLFDEAQFFTD--DLVEMVSDLVGEGKTVYVAGLN 114
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL-IGGSDIYMPV 250
DY + F + + +I +AD V LTA C C K+ KT + + +G DIY PV
Sbjct: 115 TDYKLKPFETTVKLIGIADEVNVLTAICADCAKQGATVTIKTSGSDDRIELGSEDIYKPV 174
Query: 251 CRQHYVS 257
C + Y++
Sbjct: 175 CPECYLT 181
>gi|262049286|ref|ZP_06022161.1| thymidine kinase [Staphylococcus aureus D30]
gi|259162651|gb|EEW47218.1| thymidine kinase [Staphylococcus aureus D30]
Length = 199
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG+ VIVAGLD D+
Sbjct: 67 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGRRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|294501882|ref|YP_003565582.1| thymidine kinase [Bacillus megaterium QM B1551]
gi|294351819|gb|ADE72148.1| thymidine kinase [Bacillus megaterium QM B1551]
Length = 207
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG I VI G MF+GK+ L+RR++ + V K D RY +++V+H+G
Sbjct: 3 VMKQSGWIEVICGSMFSGKSEELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ +++ ++ ++ DV+ IDE QFF+ D+ + AD G VIVAGLD
Sbjct: 63 VMAYSISASRDILKRVN----EETDVVAIDEVQFFDTDILQIVQSLADQ-GFRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG + ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFKGEPFGQMPQLMAIAESVTKLQAVCASCGSPASRTQRLINGEPASYDDPIILVGASE 177
Query: 246 IYMPVCRQHYV 256
Y P CR +V
Sbjct: 178 SYEPRCRHCHV 188
>gi|149280617|ref|ZP_01886732.1| thymidine kinase [Pedobacter sp. BAL39]
gi|149228662|gb|EDM34066.1| thymidine kinase [Pedobacter sp. BAL39]
Length = 174
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 13/173 (7%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT LLRR++ V + K DTRY +++V+HD L ++ S
Sbjct: 1 MFSGKTEELLRRLKRAQIAKLKVEIFKPRTDTRYDENAVVSHD--------LNSIQSTPV 52
Query: 147 KFGSDAY---DQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSV 202
S V+V+GIDEAQFF E+L + C A+ G VIVAGLD D++ + FG V
Sbjct: 53 DHSSTILLLAPDVEVVGIDEAQFFDENLPEVCNTLANK-GIRVIVAGLDMDFMGKPFGPV 111
Query: 203 IDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
++ +A+ VTK+ A C CG A ++ R + + L+G D Y P CR Y
Sbjct: 112 PALMAIAELVTKVNAVCVCCGAPAVYSYRTVADERKILLGEKDSYEPRCRPCY 164
>gi|344205378|ref|YP_004790520.1| thymidine kinase [Mycoplasma putrefaciens KS1]
gi|343957301|gb|AEM69016.1| thymidine kinase [Mycoplasma putrefaciens KS1]
Length = 208
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
++ G I +I G MFAGKT +RRI+ + + V V K D RY + +H G L
Sbjct: 13 NNKMGWIELITGCMFAGKTEEFIRRIRVLSYAKKKVVVFKPGIDQRYSKHHVASHSGTML 72
Query: 134 PCCALTTLSSFRQKFGSDAYDQ-VDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ S R+ ++ + VDV+GIDE QF ED+ + + AD G VIV GLD
Sbjct: 73 DSYIVQNSSDIRKIIDNENLTKIVDVVGIDEVQFLDEDIVELIDQLADQ-GIIVIVNGLD 131
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSD 245
D+ + F +V ++ LA+ VTKL ARC CG A + R E K + L+ G++
Sbjct: 132 KDFRSKPFKNVDKLLALAEFVTKLRARCHICGNFANRSQRIVDGEPAKWDSPLILVDGTE 191
Query: 246 IYMPVCRQHYV 256
Y CR YV
Sbjct: 192 SYEARCRSCYV 202
>gi|256384020|gb|ACU78590.1| thymidine kinase [Mycoplasma mycoides subsp. capri str. GM12]
gi|256384852|gb|ACU79421.1| thymidine kinase [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455314|gb|ADH21549.1| thymidine kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 209
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S+ G I +I G MFAGKT +RR++ + + V K + D RY +++I++H
Sbjct: 10 EAYNSNKMGWIELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHS 69
Query: 130 GVKLPCCALTTLSSFRQKF-GSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
G KL + + +Q + QVDVIGIDE QFF++ E + G VIV
Sbjct: 70 GSKLDSYLVHSSDEIKQIIEKENQIQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVN 129
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD D+ F +V ++ A+ VTKL ARC CG A + R ++ L+
Sbjct: 130 GLDKDFRCLPFKNVDKLLVTAEFVTKLRARCHLCGNFANRSQRIVNGQPALWDSPLILVD 189
Query: 243 GSDIYMPVCRQHYVS 257
G + Y CR +++
Sbjct: 190 GKESYEARCRNCFIA 204
>gi|328950908|ref|YP_004368243.1| thymidine kinase [Marinithermus hydrothermalis DSM 14884]
gi|328451232|gb|AEB12133.1| Thymidine kinase [Marinithermus hydrothermalis DSM 14884]
Length = 201
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 11/182 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + IVGPMF+GK+ L+RR++ G+ V V K D RY +V+HDG ++ A
Sbjct: 9 GWLEAIVGPMFSGKSEELIRRVKRALIAGQRVQVFKPRLDDRYHASDVVSHDGTRVEAVA 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ R + D Q V+ +DE QFF+ L + E + G VIVAGLD D+
Sbjct: 69 VADSRELRARL-QDPLPQ--VVAVDEVQFFDAGLVELVMELTEQ-GVRVIVAGLDLDFRG 124
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG + +++ A+ V KL+A C CG+ A T R L+G ++Y P
Sbjct: 125 EPFGIIPELLARAEWVEKLSAVCPRCGRAATRTQRLINGQPARYDDPVILVGAHEVYEPR 184
Query: 251 CR 252
CR
Sbjct: 185 CR 186
>gi|295707230|ref|YP_003600305.1| thymidine kinase [Bacillus megaterium DSM 319]
gi|294804889|gb|ADF41955.1| thymidine kinase [Bacillus megaterium DSM 319]
Length = 208
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG I VI G MF+GK+ L+RR++ + V K D RY +++V+H+G
Sbjct: 4 VMKQSGWIEVICGSMFSGKSEELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTS 63
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ +++ ++ ++ DV+ IDE QFF+ D+ + + AD G VIVAGLD
Sbjct: 64 VMAYSISASRDILKRVD----EETDVVAIDEVQFFDTDILEIVQSLADQ-GFRVIVAGLD 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG + ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 119 QDFKGEPFGQMPQLMAIAESVTKLQAVCASCGSPASRTQRLINGEPASYDDPIILVGASE 178
Query: 246 IYMPVCRQHYV 256
Y P CR +V
Sbjct: 179 SYEPRCRHCHV 189
>gi|15925109|ref|NP_372643.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu50]
gi|15927693|ref|NP_375226.1| thymidine kinase [Staphylococcus aureus subsp. aureus N315]
gi|148268570|ref|YP_001247513.1| thymidine kinase [Staphylococcus aureus subsp. aureus JH9]
gi|150394634|ref|YP_001317309.1| thymidine kinase [Staphylococcus aureus subsp. aureus JH1]
gi|156980434|ref|YP_001442693.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu3]
gi|253315788|ref|ZP_04839001.1| thymidine kinase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006907|ref|ZP_05145508.2| thymidine kinase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257793877|ref|ZP_05642856.1| thymidine kinase [Staphylococcus aureus A9781]
gi|258407045|ref|ZP_05680195.1| thymidine kinase [Staphylococcus aureus A9763]
gi|258422067|ref|ZP_05684984.1| thymidine kinase [Staphylococcus aureus A9719]
gi|258433564|ref|ZP_05688637.1| thymidine kinase [Staphylococcus aureus A9299]
gi|258440459|ref|ZP_05690629.1| thymidine kinase [Staphylococcus aureus A8115]
gi|258445667|ref|ZP_05693845.1| thymidine kinase [Staphylococcus aureus A6300]
gi|258450121|ref|ZP_05698216.1| thymidine kinase [Staphylococcus aureus A6224]
gi|258453424|ref|ZP_05701406.1| thymidine kinase [Staphylococcus aureus A5937]
gi|269203755|ref|YP_003283024.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED98]
gi|282894763|ref|ZP_06302989.1| thymidine kinase [Staphylococcus aureus A8117]
gi|282929043|ref|ZP_06336628.1| thymidine kinase [Staphylococcus aureus A10102]
gi|295407049|ref|ZP_06816851.1| thymidine kinase [Staphylococcus aureus A8819]
gi|296275402|ref|ZP_06857909.1| thymidine kinase [Staphylococcus aureus subsp. aureus MR1]
gi|297246048|ref|ZP_06929905.1| thymidine kinase [Staphylococcus aureus A8796]
gi|384865304|ref|YP_005750663.1| thymidine kinase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387151244|ref|YP_005742808.1| Thymidine kinase [Staphylococcus aureus 04-02981]
gi|415694102|ref|ZP_11455682.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS03]
gi|417651592|ref|ZP_12301352.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21172]
gi|417802256|ref|ZP_12449321.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21318]
gi|417893633|ref|ZP_12537658.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21201]
gi|418425288|ref|ZP_12998382.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS1]
gi|418428180|ref|ZP_13001169.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS2]
gi|418431066|ref|ZP_13003967.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418434972|ref|ZP_13006823.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS4]
gi|418437739|ref|ZP_13009516.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS5]
gi|418440667|ref|ZP_13012354.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS6]
gi|418443643|ref|ZP_13015229.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS7]
gi|418446639|ref|ZP_13018101.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS8]
gi|418449725|ref|ZP_13021097.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS9]
gi|418452565|ref|ZP_13023887.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS10]
gi|418455520|ref|ZP_13026771.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|418458396|ref|ZP_13029587.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|418568172|ref|ZP_13132523.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21272]
gi|418638760|ref|ZP_13201043.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-3]
gi|418651984|ref|ZP_13213964.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-99]
gi|418663266|ref|ZP_13224788.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-122]
gi|418878976|ref|ZP_13433207.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418881814|ref|ZP_13436026.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418884445|ref|ZP_13438635.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|418887149|ref|ZP_13441292.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|418895714|ref|ZP_13449805.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|418915250|ref|ZP_13469217.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418920948|ref|ZP_13474876.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|418992036|ref|ZP_13539694.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|419783650|ref|ZP_14309434.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-M]
gi|424771944|ref|ZP_18199060.1| thymidine kinase [Staphylococcus aureus subsp. aureus CM05]
gi|443636409|ref|ZP_21120519.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21236]
gi|448745214|ref|ZP_21727077.1| thymidine kinase [Staphylococcus aureus KT/Y21]
gi|54037509|sp|P65231.1|KITH_STAAN RecName: Full=Thymidine kinase
gi|54041409|sp|P65230.1|KITH_STAAM RecName: Full=Thymidine kinase
gi|13701913|dbj|BAB43205.1| thymidine kinase [Staphylococcus aureus subsp. aureus N315]
gi|14247892|dbj|BAB58281.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu50]
gi|147741639|gb|ABQ49937.1| Thymidine kinase [Staphylococcus aureus subsp. aureus JH9]
gi|149947086|gb|ABR53022.1| Thymidine kinase [Staphylococcus aureus subsp. aureus JH1]
gi|156722569|dbj|BAF78986.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu3]
gi|257787849|gb|EEV26189.1| thymidine kinase [Staphylococcus aureus A9781]
gi|257841378|gb|EEV65822.1| thymidine kinase [Staphylococcus aureus A9763]
gi|257841967|gb|EEV66399.1| thymidine kinase [Staphylococcus aureus A9719]
gi|257849295|gb|EEV73274.1| thymidine kinase [Staphylococcus aureus A9299]
gi|257852528|gb|EEV76446.1| thymidine kinase [Staphylococcus aureus A8115]
gi|257855506|gb|EEV78443.1| thymidine kinase [Staphylococcus aureus A6300]
gi|257856595|gb|EEV79501.1| thymidine kinase [Staphylococcus aureus A6224]
gi|257864405|gb|EEV87151.1| thymidine kinase [Staphylococcus aureus A5937]
gi|262076045|gb|ACY12018.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED98]
gi|282589349|gb|EFB94441.1| thymidine kinase [Staphylococcus aureus A10102]
gi|282762851|gb|EFC02985.1| thymidine kinase [Staphylococcus aureus A8117]
gi|285817783|gb|ADC38270.1| Thymidine kinase [Staphylococcus aureus 04-02981]
gi|294968074|gb|EFG44101.1| thymidine kinase [Staphylococcus aureus A8819]
gi|297177047|gb|EFH36302.1| thymidine kinase [Staphylococcus aureus A8796]
gi|312830471|emb|CBX35313.1| thymidine kinase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128790|gb|EFT84790.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS03]
gi|329726334|gb|EGG62802.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21172]
gi|334275001|gb|EGL93303.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21318]
gi|341854029|gb|EGS94903.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21201]
gi|371980440|gb|EHO97648.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21272]
gi|375020761|gb|EHS14277.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-3]
gi|375023066|gb|EHS16530.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-99]
gi|375034528|gb|EHS27689.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-122]
gi|377692889|gb|EHT17268.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377693012|gb|EHT17389.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377713278|gb|EHT37487.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377721444|gb|EHT45576.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377723878|gb|EHT47999.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|377729810|gb|EHT53893.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377754693|gb|EHT78600.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377762493|gb|EHT86356.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|383364947|gb|EID42252.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-M]
gi|387716329|gb|EIK04388.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS2]
gi|387716739|gb|EIK04788.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387717084|gb|EIK05110.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS1]
gi|387723795|gb|EIK11511.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS4]
gi|387725366|gb|EIK12984.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS5]
gi|387728626|gb|EIK16110.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS6]
gi|387733425|gb|EIK20609.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS8]
gi|387734815|gb|EIK21967.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS7]
gi|387735106|gb|EIK22245.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS9]
gi|387742411|gb|EIK29229.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS10]
gi|387743047|gb|EIK29846.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|387744191|gb|EIK30962.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|402347531|gb|EJU82558.1| thymidine kinase [Staphylococcus aureus subsp. aureus CM05]
gi|408424068|emb|CCJ11479.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408426057|emb|CCJ13444.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408428045|emb|CCJ15408.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408430034|emb|CCJ27199.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408432021|emb|CCJ19336.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408434015|emb|CCJ21300.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408436008|emb|CCJ23268.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408437991|emb|CCJ25234.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|443407788|gb|ELS66326.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21236]
gi|445561485|gb|ELY17687.1| thymidine kinase [Staphylococcus aureus KT/Y21]
Length = 199
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 67 NISKASEIM----THNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|425738332|ref|ZP_18856597.1| thymidine kinase [Staphylococcus massiliensis S46]
gi|425480005|gb|EKU47175.1| thymidine kinase [Staphylococcus massiliensis S46]
Length = 199
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPAIDNRYHDEKVVSHNGNAIEA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+SS R D + VD+IGIDE QFFE+ E G VIVAGLD D+
Sbjct: 66 --INISSARDILLQD-LESVDIIGIDEIQFFEEEIVHIAEKLAERGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F V ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFDPVPKMMAVSEHVTKLQAVCSVCGASSSRTQRLIDGKPARYDEPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H+V
Sbjct: 183 CRAHHV 188
>gi|16082222|ref|NP_394670.1| thymidine kinase [Thermoplasma acidophilum DSM 1728]
gi|10640525|emb|CAC12339.1| thymidine kinase related protein [Thermoplasma acidophilum]
Length = 186
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT+ L+ ++ GR V + K D+RY + +VTH G+KLP T F +
Sbjct: 1 MFSGKTSRLIELMERHILAGRKVTLFKPEIDSRYSENEVVTHKGIKLPAVIAPTDERFGE 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD--HDGKTVIVAGLDGDYLRRSFGSVID 204
+ D +V+G DEAQF++ + D + G+TV VA L+ D+ F +D
Sbjct: 61 FLAARTRDS-NVLGFDEAQFWKPSSRLPQHLEDLANSGRTVYVAALNRDHFGNPFRMTVD 119
Query: 205 IIPLADSVTKLTARCEFCGKRAFFTLRKTEETKT--EL--IGGSDIYMPVCRQHYV 256
I+ ++D + L+A C CG A FT R + E+ IGG D+Y P CR +V
Sbjct: 120 ILAISDEIYTLSAVCSRCGSDAIFTQRIINGSPAFGEIIRIGGKDLYEPRCRNCFV 175
>gi|340347704|ref|ZP_08670809.1| thymidine kinase [Prevotella dentalis DSM 3688]
gi|339608898|gb|EGQ13781.1| thymidine kinase [Prevotella dentalis DSM 3688]
Length = 223
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ +NV + K DTRY ++V+HD +
Sbjct: 29 GRIEVVCGSMFSGKTEELIRRLKRAQFARQNVEIFKPALDTRYSEINVVSHDNNAIHSTP 88
Query: 138 LTTLSS-FRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ + R G + V+GIDEAQF +D L + C A+ G VIVAGLD DYL
Sbjct: 89 VDNAETILRLSAGHE------VVGIDEAQFLDDKLVEVCNAMAN-KGIRVIVAGLDMDYL 141
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FG + + +AD VTK+ A C CG A+ + R ++G Y P+CR
Sbjct: 142 GVPFGPIPALCAVADEVTKVHAICVKCGALAYASHRLVHNDAQVMLGEKMEYEPLCR 198
>gi|345868068|ref|ZP_08820064.1| thymidine kinase [Bizionia argentinensis JUB59]
gi|344047550|gb|EGV43178.1| thymidine kinase [Bizionia argentinensis JUB59]
Length = 210
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K D+RY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPTVDSRYDEEMVVSHDANQIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + D DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPILA--------DGCDVVGIDEAQFFDDEIVRVCNDLANK-GVRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + +++ A+ VTK+ A C G A F+ RK++ L+G + Y P+ R
Sbjct: 125 FKGNPFGPMPNLMATAEYVTKVHAICTKTGNLAQFSYRKSQNDNLVLLGEVEEYEPLSRA 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|307566073|ref|ZP_07628531.1| thymidine kinase [Prevotella amnii CRIS 21A-A]
gi|307345261|gb|EFN90640.1| thymidine kinase [Prevotella amnii CRIS 21A-A]
Length = 196
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 92/179 (51%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 12 GRIEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDVRYSEEEVVSHDHNSILSTP 71
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + S SD +DV+GIDEAQFF+ L + C A +G VI+AGLD DY
Sbjct: 72 IGSSESILL-LASD----IDVVGIDEAQFFDQGLVEVCNTLA-KNGMRVIIAGLDMDYKG 125
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R L+G Y P+CR Y
Sbjct: 126 VPFGPIPALCAIADDVTKVHAICVKCGALAYLSHRLVANEHRVLLGEQGEYEPLCRDCY 184
>gi|407977842|ref|ZP_11158678.1| thymidine kinase [Bacillus sp. HYC-10]
gi|407415704|gb|EKF37292.1| thymidine kinase [Bacillus sp. HYC-10]
Length = 200
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 96/190 (50%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG + VI G MF+GK+ L+RR++ T + V + K D RY +S+V+H+G
Sbjct: 3 VMKQSGWLEVICGSMFSGKSEELIRRVKRATFAKQEVKIFKPAIDNRYSSNSVVSHNGSS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ A+++ ++ DVIGIDE QFF E + D + AD G VIVAGLD
Sbjct: 63 VDGIAVSSPKDIITHIS----ERTDVIGIDEVQFFDETIIDIVTQLADK-GYRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG V ++ A+ VTKL A C CG A T R + L+G +
Sbjct: 118 QDFRGEPFGVVPHLMACAELVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPIILVGAQE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|392970039|ref|ZP_10335448.1| thymidine kinase [Staphylococcus equorum subsp. equorum Mu2]
gi|403046012|ref|ZP_10901487.1| thymidine kinase [Staphylococcus sp. OJ82]
gi|392511967|emb|CCI58655.1| thymidine kinase [Staphylococcus equorum subsp. equorum Mu2]
gi|402764174|gb|EJX18261.1| thymidine kinase [Staphylococcus sp. OJ82]
Length = 199
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY D IV+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T + + SD DVIGIDE QFFE+ E G VI AGLD D+
Sbjct: 67 NISTAAEILKHDLSDT----DVIGIDEVQFFEEGVVNIVEQLAKKGHRVITAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 123 EPFEPIPHLLAVSEEVTKLQAVCAVCGASSSRTQRLIDGNPAKIDDPVILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|379796443|ref|YP_005326444.1| thymidine kinase [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356873436|emb|CCE59775.1| thymidine kinase [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 199
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T R+ D VDVIGIDE QFF+D E +G VIVAGLD D+
Sbjct: 67 NISTA---REIMMHD-LSNVDVIGIDEVQFFDDEIVSIAEKLSSNGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLIDGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|301321054|gb|ADK69697.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 209
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S+ G I +I G MFAGKT +RR++ + + V K + D RY +++I++H
Sbjct: 10 EAYNSNKMGWIELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHS 69
Query: 130 GVKLPCCALTTLSSFRQKF-GSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
G KL + + +Q + QVDVIGIDE QFF++ E + G VIV
Sbjct: 70 GSKLDSYLVHSSDEIKQIIEKENQIQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVN 129
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD D+ F +V ++ A+ VTKL ARC CG A + R ++ L+
Sbjct: 130 GLDKDFRCLPFKNVDKLLVTAEFVTKLRARCHLCGNFANRSQRIVNGQPALWDSPLILVD 189
Query: 243 GSDIYMPVCRQHYV 256
G + Y CR ++
Sbjct: 190 GKESYEARCRNCFI 203
>gi|433652580|ref|YP_007296434.1| thymidine kinase [Prevotella dentalis DSM 3688]
gi|433303113|gb|AGB28928.1| thymidine kinase [Prevotella dentalis DSM 3688]
Length = 207
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ +NV + K DTRY ++V+HD +
Sbjct: 13 GRIEVVCGSMFSGKTEELIRRLKRAQFARQNVEIFKPALDTRYSEINVVSHDNNAIHSTP 72
Query: 138 LTTLSS-FRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ + R G + V+GIDEAQF +D L + C A+ G VIVAGLD DYL
Sbjct: 73 VDNAETILRLSAGHE------VVGIDEAQFLDDKLVEVCNAMAN-KGIRVIVAGLDMDYL 125
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FG + + +AD VTK+ A C CG A+ + R ++G Y P+CR
Sbjct: 126 GVPFGPIPALCAVADEVTKVHAICVKCGALAYASHRLVHNDAQVMLGEKMEYEPLCR 182
>gi|418283277|ref|ZP_12896028.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21202]
gi|418560767|ref|ZP_13125276.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21252]
gi|418994817|ref|ZP_13542450.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG290]
gi|365167925|gb|EHM59292.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21202]
gi|371971189|gb|EHO88596.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21252]
gi|377741750|gb|EHT65736.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG290]
Length = 199
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 67 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVNIVEKLSSDGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|311977636|ref|YP_003986756.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|82050785|sp|Q5UP25.1|KITH_MIMIV RecName: Full=Thymidine kinase
gi|55416880|gb|AAV50530.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|308204290|gb|ADO18091.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|339061191|gb|AEJ34495.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|398257106|gb|EJN40714.1| thymidine kinase [Acanthamoeba polyphaga lentillevirus]
Length = 225
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 8/181 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-----IVTHDGVKLP 134
I I+GPMF+GKTT +R I+ + G+ +IK+ +D RY D + TH+ +
Sbjct: 3 ITTIIGPMFSGKTTEFIRLIERKKIAGKKCLIIKNYRDIRYDSDDNDKYHVTTHNNIIYR 62
Query: 135 CCALTTLSSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
C + + + D + ++ DVIGI+E FFE + DF E A+ G VI++ L+
Sbjct: 63 NCDIMFTDNLNKTSLIDTFQEKYDVIGIEEGFFFEGVTDFSNELANR-GMEVIISTLESS 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y + F + +I +++ V KL A C C A FT+R E + L+GG D Y VCR
Sbjct: 122 YKQEIFSEIGKLIAISEDVIKLKAICMGCKISDASFTIRTIESDEKILVGGIDKYQSVCR 181
Query: 253 Q 253
+
Sbjct: 182 K 182
>gi|442771628|gb|AGC72309.1| thymidine kinase [uncultured bacterium A1Q1_fos_1093]
Length = 195
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVT 127
H ++ +G I V+ G MF+GKT L+RR+ + V + K D RY + IV+
Sbjct: 7 HHSKNMQPRTGWIEVVCGSMFSGKTEELIRRLNRAKIARQKVEIFKPAIDKRYHDEDIVS 66
Query: 128 HDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVI 186
H+ + + F D DV+GIDEAQF + L + C A +GK VI
Sbjct: 67 HNENSIRSTPVNAAEEILL-FAGDC----DVVGIDEAQFLDISLVEVCNRLAT-NGKRVI 120
Query: 187 VAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDI 246
VAGLD D+ + FG + ++ +A+ VTK+ A C CG+ A ++ RK L+G +D
Sbjct: 121 VAGLDMDFSGKPFGPMPQLMSIAEYVTKVHAICIVCGEVAQYSYRKVTSQDKILLGETDS 180
Query: 247 YMPVCRQHYVSGQV 260
Y CR+ Y G +
Sbjct: 181 YEARCRRCYNLGDL 194
>gi|410461464|ref|ZP_11315114.1| thymidine kinase [Bacillus azotoformans LMG 9581]
gi|409925751|gb|EKN62953.1| thymidine kinase [Bacillus azotoformans LMG 9581]
Length = 201
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GK+ L+RRI+ V V K D RY S+V+H+G +
Sbjct: 4 SGWIEVICGSMFSGKSEELIRRIRRAEYAKLTVQVFKPIIDNRYSKSSVVSHNGTSVIAK 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + + DVIGIDE QFF+D + + G +I AGLD D+
Sbjct: 64 PVENSARIIELVNPET----DVIGIDEVQFFDDEIVEVAQLLANKGYRIICAGLDQDFRG 119
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FGSV ++ LA+SVTKL A C CG A T R + L+G S+ Y
Sbjct: 120 EPFGSVPKLMALAESVTKLQAICVVCGSPASRTQRLINGKPASYHDPVILVGASEAYESR 179
Query: 251 CRQ-HYVSGQVVVEAARI 267
CR H V G+ V + I
Sbjct: 180 CRHCHQVPGKPVSKKTNI 197
>gi|256545270|ref|ZP_05472635.1| thymidine kinase [Anaerococcus vaginalis ATCC 51170]
gi|256399097|gb|EEU12709.1| thymidine kinase [Anaerococcus vaginalis ATCC 51170]
Length = 201
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
V G MF+GKTT+L R + G K + D+R+ + I++HD ++L +
Sbjct: 9 VHTGSMFSGKTTSLWRELYRMKVAGYKTIAFKPSVDSRHEDEKIISHDNLELDA---IKI 65
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFED----LYDFCREAADHDGKTVIVAGLDGDYLRR 197
S ++ +++D IGIDE QFF D + D+ E + T++V+GLD DY +
Sbjct: 66 ESIKEILDYAKNNEIDAIGIDEVQFFPDKPSKIVDYFVELM-QNHITIVVSGLDMDYKTK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F V +++P+AD + K A C CG+ A+ + RK+ + IG D Y P+CR Y
Sbjct: 125 PFEVVKELMPIADELIKHHAICASCGEDAWVSFRKSYNEERIEIGAQDSYEPLCRSCY 182
>gi|323344767|ref|ZP_08084991.1| thymidine kinase [Prevotella oralis ATCC 33269]
gi|323094037|gb|EFZ36614.1| thymidine kinase [Prevotella oralis ATCC 33269]
Length = 197
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 65 RNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS 124
NL EA G I V+ G MF+GKT L+RR++ + + K DTRY
Sbjct: 3 ENLTGEAH---RPGRIEVVCGSMFSGKTEELIRRMKRAKFAKQKAEIFKPAIDTRYSEQD 59
Query: 125 IVTHDGVKLPCCALTTLSSF---RQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADH 180
+V+HD L ++S +DV+GIDEAQF +D L D C E A+
Sbjct: 60 VVSHD--------LNVINSTPVESSASILLLSSDMDVVGIDEAQFLDDGLVDVCNELANR 111
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL 240
G VI+AGLD D+ FG + + +AD VTK+ A C CG A+ + R K L
Sbjct: 112 -GVRVIIAGLDMDFKGIPFGPIPALCAIADEVTKVHAICVKCGALAYVSHRLVPNDKQVL 170
Query: 241 IGGSDIYMPVCRQHY 255
+G Y P+CR Y
Sbjct: 171 LGEKTEYEPLCRDCY 185
>gi|409123686|ref|ZP_11223081.1| thymidine kinase [Gillisia sp. CBA3202]
Length = 213
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ T + V + K D RY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRATFAKQKVEIFKPAIDKRYHEEMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + ++ R D DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPSAANIRI-----LADGCDVVGIDEAQFFDDEIVTVCNDLAN-SGIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + +++ A+ VTK+ A C G A F+ RK +G ++ Y P+ R Y
Sbjct: 128 NPFGPMPNLMATAEYVTKVHAVCTRTGNLAQFSYRKAVNDDLVFLGENEEYEPLSRAAY 186
>gi|386729809|ref|YP_006196192.1| thymidine kinase [Staphylococcus aureus subsp. aureus 71193]
gi|418979398|ref|ZP_13527194.1| Thymidine kinase [Staphylococcus aureus subsp. aureus DR10]
gi|379992829|gb|EIA14279.1| Thymidine kinase [Staphylococcus aureus subsp. aureus DR10]
gi|384231102|gb|AFH70349.1| Thymidine kinase [Staphylococcus aureus subsp. aureus 71193]
Length = 206
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 14 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 73
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 74 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 130 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 189
Query: 251 CRQHYV 256
CR H++
Sbjct: 190 CRAHHI 195
>gi|295428706|ref|ZP_06821332.1| thymidine kinase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|295127376|gb|EFG57016.1| thymidine kinase [Staphylococcus aureus subsp. aureus EMRSA16]
Length = 203
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 11 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 70
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 71 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 127 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 186
Query: 251 CRQHYV 256
CR H++
Sbjct: 187 CRAHHI 192
>gi|387133161|ref|YP_006299133.1| thymidine kinase [Prevotella intermedia 17]
gi|386376009|gb|AFJ09696.1| thymidine kinase [Prevotella intermedia 17]
Length = 202
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD +
Sbjct: 14 QGRIEVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDMRYSEEDVVSHDQNAIRST 73
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + SD ++V+GIDEAQF E L D C + A+ +G VIVAGLD D+
Sbjct: 74 PINSSGNILL-LASD----IEVVGIDEAQFLDEGLVDICNQLAN-NGVRVIVAGLDMDFK 127
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD VTK+ A C CG A+ + R + ++G Y P+CR+ Y
Sbjct: 128 GVPFGPIPSLCAVADQVTKVHAICVKCGALAYASHRLVDNDHRVMLGEQMEYEPLCRECY 187
>gi|47459450|ref|YP_016312.1| thymidine kinase [Mycoplasma mobile 163K]
gi|60390016|sp|Q6KH30.1|KITH_MYCMO RecName: Full=Thymidine kinase
gi|47458780|gb|AAT28101.1| thymidine kinase [Mycoplasma mobile 163K]
Length = 200
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPM++GK+ L++RI+ ++K DTR+ + IV+ G KL
Sbjct: 8 GIIEVITGPMYSGKSEELIKRIKILQFANIKTLIVKQKFDTRFSHNEIVSRSGTKLNTIV 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + K ++ Y I IDE QFF+ D+ ++ E A G VI++GLD D+ R
Sbjct: 68 ASNVEEIK-KVWNNTYK---AIAIDEVQFFDKDIINYIDELASK-GIRVIISGLDTDFAR 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + +++ +AD V KL A C C T R T + +L+G ++ Y CR+ ++
Sbjct: 123 KPFGIMPELLAIADDVLKLKAVCFSCKNAGTHTFRITNDKDQKLLGDTESYQARCRKCHL 182
Query: 257 SGQ 259
G+
Sbjct: 183 EGE 185
>gi|17158497|ref|NP_477917.1| wsv395 [Shrimp white spot syndrome virus]
gi|17016791|gb|AAL33397.1| wsv395 [shrimp white spot syndrome virus]
gi|417072623|gb|AFX59772.1| wsv395 [White spot syndrome virus]
Length = 398
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 12/208 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL--DSIVTHDGVKLP 134
+G + ++ GPMFAGK+T L Q E ++ +K + +TRYG +IVTH G +
Sbjct: 12 AGRVELVTGPMFAGKSTYLKNIYQQENGGNKHCLFVKHSLETRYGCGTGTIVTHAGEVIE 71
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
C TT+SS ++ S + VDVI IDE QFF DL R A GK +++A LDG
Sbjct: 72 GC--TTVSSIKELI-SVLPEVVDVILIDEGQFFTDLVLVNRLA--DKGKRIVIAALDGTS 126
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCG---KRAFFTLRKTEETKTELI--GGSDIYMP 249
++ F + ++P +S+ KL ++C C K A FT+R + +I GG+++Y
Sbjct: 127 DQQMFSPIHKLLPYTNSIVKLASKCMICKIDTKEAPFTVRFGNDNDNNVICVGGAEMYAA 186
Query: 250 VCRQHYVSGQVVVEAARIVLESQKVQCG 277
CR Y ++V+ +CG
Sbjct: 187 ACRDCYKKINKKKNKGKLVVLEGGDRCG 214
>gi|11875610|gb|AAG40728.1|AF272669_1 thymidine kinase [White spot syndrome virus]
gi|15021563|gb|AAK77840.1|AF369029_171 ORF171, putative chimeric thymidine kinase - thymidylate kinase
[shrimp white spot syndrome virus]
gi|19482046|gb|AAL89322.1| WSSV454 [shrimp white spot syndrome virus]
Length = 388
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 12/208 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL--DSIVTHDGVKLP 134
+G + ++ GPMFAGK+T L Q E ++ +K + +TRYG +IVTH G +
Sbjct: 2 AGRVELVTGPMFAGKSTYLKNIYQQENGGNKHCLFVKHSLETRYGCGTGTIVTHAGEVIE 61
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
C TT+SS ++ S + VDVI IDE QFF DL R A GK +++A LDG
Sbjct: 62 GC--TTVSSIKELI-SVLPEVVDVILIDEGQFFTDLVLVNRLA--DKGKRIVIAALDGTS 116
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCG---KRAFFTLRKTEETKTELI--GGSDIYMP 249
++ F + ++P +S+ KL ++C C K A FT+R + +I GG+++Y
Sbjct: 117 DQQMFSPIHKLLPYTNSIVKLASKCMICKIDTKEAPFTVRFGNDNDNNVICVGGAEMYAA 176
Query: 250 VCRQHYVSGQVVVEAARIVLESQKVQCG 277
CR Y ++V+ +CG
Sbjct: 177 ACRDCYKKINKKKNKGKLVVLEGGDRCG 204
>gi|341582978|ref|YP_004763470.1| thymidine kinase [Thermococcus sp. 4557]
gi|340810636|gb|AEK73793.1| thymidine kinase [Thermococcus sp. 4557]
Length = 193
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 7/187 (3%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++RI+ +T R A+ K + D RY D +V H+G++
Sbjct: 4 PGGFLEVITGPMFAGKTTELIKRIERQTFAKRKAALFKPSIDNRYSEDDVVAHNGLRYEA 63
Query: 136 CALTTLSSFRQKFGSDAYDQ-VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
+ T + D+ +VIG+DE QFF + +G VI +GL+ D+
Sbjct: 64 FVVPTNEEGVELIERITLDEGFEVIGVDEVQFFPQVIVETLNRLADEGIYVIASGLNLDF 123
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYM 248
F D++ AD++ LTA C CGK A + R + ++ L+G S+ Y
Sbjct: 124 KGDPFPVTRDLLVRADNIVYLTAVCTVCGKPATRSQRLIDGKPAPRDSPIILVGSSESYE 183
Query: 249 PVCRQHY 255
CR+H+
Sbjct: 184 ARCREHH 190
>gi|21283772|ref|NP_646860.1| thymidine kinase [Staphylococcus aureus subsp. aureus MW2]
gi|49484343|ref|YP_041567.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|49486912|ref|YP_044133.1| thymidine kinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57652141|ref|YP_186926.1| thymidine kinase [Staphylococcus aureus subsp. aureus COL]
gi|82751720|ref|YP_417461.1| thymidine kinase [Staphylococcus aureus RF122]
gi|87160651|ref|YP_494719.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196023|ref|YP_500836.1| thymidine kinase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151222235|ref|YP_001333057.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newman]
gi|161510324|ref|YP_001575983.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141638|ref|ZP_03566131.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|253731043|ref|ZP_04865208.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733047|ref|ZP_04867212.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257426258|ref|ZP_05602673.1| thymidine kinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428916|ref|ZP_05605310.1| thymidine kinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431525|ref|ZP_05607898.1| thymidine kinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257434234|ref|ZP_05610584.1| thymidine kinase [Staphylococcus aureus subsp. aureus E1410]
gi|257437147|ref|ZP_05613187.1| thymidine kinase [Staphylococcus aureus subsp. aureus M876]
gi|258453171|ref|ZP_05701162.1| thymidine kinase [Staphylococcus aureus A5948]
gi|262052621|ref|ZP_06024815.1| thymidine kinase [Staphylococcus aureus 930918-3]
gi|282904788|ref|ZP_06312662.1| thymidine kinase [Staphylococcus aureus subsp. aureus C160]
gi|282906463|ref|ZP_06314314.1| thymidine kinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282909432|ref|ZP_06317247.1| thymidine kinase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911684|ref|ZP_06319483.1| thymidine kinase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282914968|ref|ZP_06322748.1| thymidine kinase [Staphylococcus aureus subsp. aureus M899]
gi|282917468|ref|ZP_06325221.1| thymidine kinase [Staphylococcus aureus subsp. aureus D139]
gi|282920297|ref|ZP_06328021.1| thymidine kinase [Staphylococcus aureus subsp. aureus C427]
gi|282923107|ref|ZP_06330792.1| thymidine kinase [Staphylococcus aureus A9765]
gi|282925508|ref|ZP_06333162.1| thymidine kinase [Staphylococcus aureus subsp. aureus C101]
gi|283771287|ref|ZP_06344176.1| thymidine kinase [Staphylococcus aureus subsp. aureus H19]
gi|283958899|ref|ZP_06376344.1| thymidine kinase [Staphylococcus aureus subsp. aureus A017934/97]
gi|284025153|ref|ZP_06379551.1| thymidine kinase [Staphylococcus aureus subsp. aureus 132]
gi|293509036|ref|ZP_06667823.1| thymidine kinase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510951|ref|ZP_06669650.1| thymidine kinase [Staphylococcus aureus subsp. aureus M809]
gi|293547553|ref|ZP_06672228.1| thymidine kinase [Staphylococcus aureus subsp. aureus M1015]
gi|294850089|ref|ZP_06790826.1| thymidine kinase [Staphylococcus aureus A9754]
gi|297210060|ref|ZP_06926453.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297589814|ref|ZP_06948454.1| thymidine kinase [Staphylococcus aureus subsp. aureus MN8]
gi|300910423|ref|ZP_07127875.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH70]
gi|304379300|ref|ZP_07362039.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|379015245|ref|YP_005291481.1| thymidine kinase [Staphylococcus aureus subsp. aureus VC40]
gi|379021795|ref|YP_005298457.1| thymidine kinase [Staphylococcus aureus subsp. aureus M013]
gi|384548344|ref|YP_005737597.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED133]
gi|384550916|ref|YP_005740168.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384862771|ref|YP_005745491.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384866958|ref|YP_005747154.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH60]
gi|384870669|ref|YP_005753383.1| thymidine kinase [Staphylococcus aureus subsp. aureus T0131]
gi|385782359|ref|YP_005758530.1| thymidine kinase [Staphylococcus aureus subsp. aureus 11819-97]
gi|386831701|ref|YP_006238355.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387143834|ref|YP_005732228.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
TW20]
gi|387603398|ref|YP_005734919.1| thymidine kinase [Staphylococcus aureus subsp. aureus ST398]
gi|387781097|ref|YP_005755895.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
LGA251]
gi|404479400|ref|YP_006710830.1| thymidine kinase [Staphylococcus aureus 08BA02176]
gi|415684945|ref|ZP_11449974.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS00]
gi|415688361|ref|ZP_11452076.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS01]
gi|417650345|ref|ZP_12300117.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21189]
gi|417655390|ref|ZP_12305103.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21193]
gi|417795561|ref|ZP_12442781.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21305]
gi|417799449|ref|ZP_12446589.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21310]
gi|417887776|ref|ZP_12531896.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21195]
gi|417897523|ref|ZP_12541454.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21235]
gi|417900282|ref|ZP_12544172.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21266]
gi|417905619|ref|ZP_12549427.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21269]
gi|418277221|ref|ZP_12891835.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21178]
gi|418286665|ref|ZP_12899306.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21209]
gi|418311346|ref|ZP_12922871.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21331]
gi|418313989|ref|ZP_12925471.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21334]
gi|418315900|ref|ZP_12927352.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21340]
gi|418319281|ref|ZP_12930665.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21232]
gi|418320101|ref|ZP_12931465.1| thymidine kinase [Staphylococcus aureus subsp. aureus VCU006]
gi|418561980|ref|ZP_13126449.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21262]
gi|418565069|ref|ZP_13129489.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21264]
gi|418569946|ref|ZP_13134248.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21283]
gi|418572732|ref|ZP_13136938.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21333]
gi|418580042|ref|ZP_13144132.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|418582938|ref|ZP_13147011.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597007|ref|ZP_13160544.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21342]
gi|418599103|ref|ZP_13162599.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21343]
gi|418602192|ref|ZP_13165604.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21345]
gi|418641117|ref|ZP_13203331.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-24]
gi|418645516|ref|ZP_13207638.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-55]
gi|418646522|ref|ZP_13208624.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-88]
gi|418649161|ref|ZP_13211191.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-91]
gi|418655899|ref|ZP_13217731.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-105]
gi|418660182|ref|ZP_13221820.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-111]
gi|418871146|ref|ZP_13425533.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-125]
gi|418875983|ref|ZP_13430232.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|418892634|ref|ZP_13446744.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418901507|ref|ZP_13455558.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418904458|ref|ZP_13458495.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|418909945|ref|ZP_13463935.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG149]
gi|418912669|ref|ZP_13466646.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG547]
gi|418918166|ref|ZP_13472119.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418923834|ref|ZP_13477745.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418926532|ref|ZP_13480428.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|418929462|ref|ZP_13483346.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|418935100|ref|ZP_13488916.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|418947883|ref|ZP_13500222.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-157]
gi|418952194|ref|ZP_13504233.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-160]
gi|418955741|ref|ZP_13507677.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-189]
gi|418983066|ref|ZP_13530770.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|418986689|ref|ZP_13534369.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|418989186|ref|ZP_13536854.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|419773817|ref|ZP_14299804.1| thymidine kinase [Staphylococcus aureus subsp. aureus CO-23]
gi|421150913|ref|ZP_15610564.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422742973|ref|ZP_16796969.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745934|ref|ZP_16799869.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|424786108|ref|ZP_18212901.1| Thymidine kinase [Staphylococcus aureus CN79]
gi|440707630|ref|ZP_20888321.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21282]
gi|440735481|ref|ZP_20915086.1| thymidine kinase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443638700|ref|ZP_21122734.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21196]
gi|448742216|ref|ZP_21724168.1| thymidine kinase [Staphylococcus aureus KT/314250]
gi|38258186|sp|Q8NVG5.1|KITH_STAAW RecName: Full=Thymidine kinase
gi|56748954|sp|Q6G7J1.1|KITH_STAAS RecName: Full=Thymidine kinase
gi|56749008|sp|Q6GEV6.1|KITH_STAAR RecName: Full=Thymidine kinase
gi|71153800|sp|Q5HE81.1|KITH_STAAC RecName: Full=Thymidine kinase
gi|109892495|sp|Q2FF09.1|KITH_STAA3 RecName: Full=Thymidine kinase
gi|109892496|sp|Q2YUN4.1|KITH_STAAB RecName: Full=Thymidine kinase
gi|21205214|dbj|BAB95908.1| thymidine kinase [Staphylococcus aureus subsp. aureus MW2]
gi|49242472|emb|CAG41188.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49245355|emb|CAG43830.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286327|gb|AAW38421.1| thymidine kinase [Staphylococcus aureus subsp. aureus COL]
gi|82657251|emb|CAI81692.1| thymidine kinase [Staphylococcus aureus RF122]
gi|87126625|gb|ABD21139.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203581|gb|ABD31391.1| thymidine kinase, putative [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|87312667|gb|ABD37699.1| thymidine kinase [Staphylococcus aureus]
gi|150375035|dbj|BAF68295.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newman]
gi|160369133|gb|ABX30104.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725231|gb|EES93960.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728955|gb|EES97684.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257270963|gb|EEV03136.1| thymidine kinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257274258|gb|EEV05775.1| thymidine kinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257277766|gb|EEV08436.1| thymidine kinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257280873|gb|EEV11018.1| thymidine kinase [Staphylococcus aureus subsp. aureus E1410]
gi|257283540|gb|EEV13667.1| thymidine kinase [Staphylococcus aureus subsp. aureus M876]
gi|257859117|gb|EEV81974.1| thymidine kinase [Staphylococcus aureus A5948]
gi|259159491|gb|EEW44541.1| thymidine kinase [Staphylococcus aureus 930918-3]
gi|269941718|emb|CBI50125.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
TW20]
gi|282312909|gb|EFB43310.1| thymidine kinase [Staphylococcus aureus subsp. aureus C101]
gi|282316157|gb|EFB46538.1| thymidine kinase [Staphylococcus aureus subsp. aureus C427]
gi|282318670|gb|EFB49027.1| thymidine kinase [Staphylococcus aureus subsp. aureus D139]
gi|282321171|gb|EFB51502.1| thymidine kinase [Staphylococcus aureus subsp. aureus M899]
gi|282324449|gb|EFB54762.1| thymidine kinase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282326702|gb|EFB57000.1| thymidine kinase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330413|gb|EFB59931.1| thymidine kinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282593298|gb|EFB98295.1| thymidine kinase [Staphylococcus aureus A9765]
gi|282594821|gb|EFB99798.1| thymidine kinase [Staphylococcus aureus subsp. aureus C160]
gi|283459492|gb|EFC06585.1| thymidine kinase [Staphylococcus aureus subsp. aureus H19]
gi|283471336|emb|CAQ50547.1| thymidine kinase [Staphylococcus aureus subsp. aureus ST398]
gi|283789617|gb|EFC28440.1| thymidine kinase [Staphylococcus aureus subsp. aureus A017934/97]
gi|290919673|gb|EFD96746.1| thymidine kinase [Staphylococcus aureus subsp. aureus M1015]
gi|291094740|gb|EFE25012.1| thymidine kinase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466236|gb|EFF08763.1| thymidine kinase [Staphylococcus aureus subsp. aureus M809]
gi|294823037|gb|EFG39469.1| thymidine kinase [Staphylococcus aureus A9754]
gi|296885260|gb|EFH24200.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297576942|gb|EFH95656.1| thymidine kinase [Staphylococcus aureus subsp. aureus MN8]
gi|298695393|gb|ADI98615.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED133]
gi|300888265|gb|EFK83456.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH70]
gi|302333765|gb|ADL23958.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302752000|gb|ADL66177.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304342159|gb|EFM08059.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312437463|gb|ADQ76534.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193284|gb|EFU23682.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS00]
gi|315196947|gb|EFU27289.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS01]
gi|320140709|gb|EFW32561.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143685|gb|EFW35462.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|329314804|gb|AEB89217.1| Thymidine kinase [Staphylococcus aureus subsp. aureus T0131]
gi|329723998|gb|EGG60522.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21189]
gi|329729342|gb|EGG65750.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21193]
gi|334270921|gb|EGL89317.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21305]
gi|334273780|gb|EGL92119.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21310]
gi|341839621|gb|EGS81201.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21235]
gi|341843082|gb|EGS84314.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21269]
gi|341848962|gb|EGS90117.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21266]
gi|341857124|gb|EGS97947.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21195]
gi|344178199|emb|CCC88685.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
LGA251]
gi|359831104|gb|AEV79082.1| Thymidine kinase [Staphylococcus aureus subsp. aureus M013]
gi|364523348|gb|AEW66098.1| thymidine kinase [Staphylococcus aureus subsp. aureus 11819-97]
gi|365165878|gb|EHM57626.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21209]
gi|365173699|gb|EHM64185.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21178]
gi|365228417|gb|EHM69601.1| thymidine kinase [Staphylococcus aureus subsp. aureus VCU006]
gi|365234477|gb|EHM75409.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21331]
gi|365234603|gb|EHM75533.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21334]
gi|365241018|gb|EHM81775.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21232]
gi|365242488|gb|EHM83195.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21340]
gi|371974818|gb|EHO92133.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21262]
gi|371975223|gb|EHO92522.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21264]
gi|371984076|gb|EHP01203.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21333]
gi|371985151|gb|EHP02236.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21283]
gi|374363942|gb|AEZ38047.1| thymidine kinase [Staphylococcus aureus subsp. aureus VC40]
gi|374395792|gb|EHQ67048.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21342]
gi|374396746|gb|EHQ67972.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21345]
gi|374398153|gb|EHQ69343.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21343]
gi|375019880|gb|EHS13430.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-24]
gi|375023035|gb|EHS16501.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-55]
gi|375030420|gb|EHS23737.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-91]
gi|375032679|gb|EHS25905.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-88]
gi|375032757|gb|EHS25978.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-111]
gi|375035285|gb|EHS28415.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-105]
gi|375369080|gb|EHS72971.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-125]
gi|375369558|gb|EHS73432.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-160]
gi|375370466|gb|EHS74271.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-189]
gi|375374065|gb|EHS77709.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-157]
gi|377693381|gb|EHT17753.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|377700743|gb|EHT25077.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377702586|gb|EHT26907.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377702693|gb|EHT27013.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377709172|gb|EHT33443.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377715714|gb|EHT39901.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377721176|gb|EHT45317.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG547]
gi|377729637|gb|EHT53727.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377732023|gb|EHT56075.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377736654|gb|EHT60669.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|377739894|gb|EHT63894.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|377741383|gb|EHT65372.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|377748434|gb|EHT72391.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|377749908|gb|EHT73847.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG149]
gi|377768409|gb|EHT92192.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|377769202|gb|EHT92978.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|383972389|gb|EID88434.1| thymidine kinase [Staphylococcus aureus subsp. aureus CO-23]
gi|385197093|emb|CCG16738.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|394328997|gb|EJE55124.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|404440889|gb|AFR74082.1| putative thymidine kinase [Staphylococcus aureus 08BA02176]
gi|421955634|gb|EKU07970.1| Thymidine kinase [Staphylococcus aureus CN79]
gi|436430589|gb|ELP27949.1| thymidine kinase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505806|gb|ELP41676.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21282]
gi|443408736|gb|ELS67251.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21196]
gi|445547087|gb|ELY15361.1| thymidine kinase [Staphylococcus aureus KT/314250]
Length = 199
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 67 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|417898352|ref|ZP_12542273.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21259]
gi|341848712|gb|EGS89872.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21259]
Length = 199
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 67 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|334337546|ref|YP_004542698.1| thymidine kinase [Isoptericola variabilis 225]
gi|334107914|gb|AEG44804.1| Thymidine kinase [Isoptericola variabilis 225]
Length = 190
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + V+ GPMFAGKT L+RR+ GR V V+ DTR G + +H G+++P
Sbjct: 7 AGRLEVVAGPMFAGKTEELVRRVHRARIAGRGVVVVAHALDTRSGPGRVASHSGLEVPSS 66
Query: 137 ALTTLSSFRQ--KFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
+ S + +FG+ ++ +DEAQFF L D AD G V+VAGL
Sbjct: 67 TVAAASEIPRLVEFGT------RMVAVDEAQFFGPGLVDVAVGLAD-AGLVVVVAGLSVT 119
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETK---------TELIGGS 244
+ R F + ++ +A+SVTKLTA C CG+ A + +R + E +GG+
Sbjct: 120 FDGRPFEPLPALMAVAESVTKLTAVCAVCGRDAAYHVRLPDGGTPAGDALTPVAEHVGGT 179
Query: 245 DIYMPVCRQH 254
+ Y CR H
Sbjct: 180 ESYQARCRLH 189
>gi|374596034|ref|ZP_09669038.1| Thymidine kinase [Gillisia limnaea DSM 15749]
gi|373870673|gb|EHQ02671.1| Thymidine kinase [Gillisia limnaea DSM 15749]
Length = 213
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDKRYHEEMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + ++ R D DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPSAATIRL-----MADGCDVVGIDEAQFFDDEIVTVCNDLANR-GVRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + +++ A+ VTK+ A C G A F+ RK +G ++ Y P+ R Y
Sbjct: 128 NPFGPMPNLMATAEYVTKVHAVCTRTGNLAQFSYRKASNDDLVFLGENEEYEPLSRGAY 186
>gi|416841468|ref|ZP_11904423.1| thymidine kinase [Staphylococcus aureus O11]
gi|416847179|ref|ZP_11906988.1| thymidine kinase [Staphylococcus aureus O46]
gi|323439332|gb|EGA97056.1| thymidine kinase [Staphylococcus aureus O11]
gi|323442459|gb|EGB00088.1| thymidine kinase [Staphylococcus aureus O46]
Length = 199
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 67 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|311070225|ref|YP_003975148.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|419821402|ref|ZP_14344996.1| thymidine kinase [Bacillus atrophaeus C89]
gi|310870742|gb|ADP34217.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|388474375|gb|EIM11104.1| thymidine kinase [Bacillus atrophaeus C89]
Length = 198
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G +
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPAIDNRYSEEAVVSHNGTSMTSH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + DVI +DE QFF+ + + G VI AGLD D+
Sbjct: 67 VIAAPAEIWNHIS----ETTDVIAVDEVQFFDRMIIEVLSSLADKGYRVIAAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG V D++ +A++VTKL A C CG A T R + + L+G S+ Y
Sbjct: 123 EPFGVVPDLMAMAETVTKLQAVCSVCGSPASRTQRLINGKPASYDDPIILVGASESYEAR 182
Query: 251 CRQHY 255
CR H+
Sbjct: 183 CRHHH 187
>gi|229087821|ref|ZP_04219937.1| Thymidine kinase [Bacillus cereus Rock3-44]
gi|228695496|gb|EEL48365.1| Thymidine kinase [Bacillus cereus Rock3-44]
Length = 194
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 20/188 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ +N V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYD----QVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
++ D +D ++DVI IDE QFF+ D+ + + A+ G VIVAGLD
Sbjct: 67 PVSA--------SKDIFDYITEEMDVIAIDEVQFFDGDIVEVVQILANR-GYRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG V ++ +A+ VTKL A C CG A T R + L+G S+
Sbjct: 118 QDFRGLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLINDEPASFDDPIILVGASE 177
Query: 246 IYMPVCRQ 253
Y P CR
Sbjct: 178 SYEPRCRH 185
>gi|239637412|ref|ZP_04678394.1| thymidine kinase [Staphylococcus warneri L37603]
gi|239597012|gb|EEQ79527.1| thymidine kinase [Staphylococcus warneri L37603]
Length = 199
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHNGNAIEA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ R+ D DVIGIDE QFF E++ ++ AD G VIVAGLD D+
Sbjct: 66 --INISTAREILNHD-ISHADVIGIDEVQFFDENIVSIIQQLADQ-GHRVIVAGLDMDFK 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
F + +++ L++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 122 GEPFEPMPELLALSEHVTKLQAVCAVCGGPSSRTQRLIDGQPAKADDPIILVGANESYEP 181
Query: 250 VCRQHYV 256
CR H++
Sbjct: 182 RCRAHHI 188
>gi|337293352|emb|CCB91341.1| Thymidine kinase [Waddlia chondrophila 2032/99]
Length = 209
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL--- 133
SG++ VI G MF+GKT L+ R++ +NV IK D R IV+H+GV+
Sbjct: 6 SGKLEVICGSMFSGKTEELMLRLRRAEYAKKNVMTIKHEIDNRKSYSCIVSHNGVERTAQ 65
Query: 134 ---PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
PC L++ +Q VDV+GIDE QFF D GK V+VAGL
Sbjct: 66 PIEPC--KDGLNTLKQCVDG----AVDVVGIDEIQFFPDEIIPILLMMVESGKRVLVAGL 119
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
D D+ FG V ++ LAD V KL A C CG A FT R + T L+GG
Sbjct: 120 DMDFRCEPFGIVPTLMSLADEVCKLRAICVVCGNDANFTQRLINGKPAKYDDPTILVGGQ 179
Query: 245 DIYMPVCRQHY 255
+ Y CR+ Y
Sbjct: 180 ECYEARCRRCY 190
>gi|410456620|ref|ZP_11310479.1| thymidine kinase [Bacillus bataviensis LMG 21833]
gi|409927741|gb|EKN64868.1| thymidine kinase [Bacillus bataviensis LMG 21833]
Length = 198
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ + +AV K D RY S+V+H+G
Sbjct: 7 SGWVEVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPKIDNRYHEQSVVSHNGSSFHAK 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++ +D +D+I IDE QFF E + ++ AD G VI AGLD D+
Sbjct: 67 PISHSIEILHHVEAD----MDIIAIDEIQFFDEGIVRVVQQLAD-SGHRVICAGLDMDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG + ++ +A+SVTKL A C CG + T R + L+G S+ Y P
Sbjct: 122 GEPFGQMPMLMAIAESVTKLQAVCTVCGSPSSRTQRLIDGRPASYHDPVILVGASEAYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|304440663|ref|ZP_07400547.1| thymidine kinase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304370850|gb|EFM24472.1| thymidine kinase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 195
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G++ + G MF+GKT++L R ++ G K DTR D I THD +
Sbjct: 5 KGKLIMHTGSMFSGKTSSLEREMKRFAIAGYKTCAFKPAMDTRDKKDRITTHDKTYIEAV 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-----EDLYDFCREAADHDGKTVIVAGLD 191
+ ++ KF + + VDV+GIDE QF E L D + +DGKTV+VAGLD
Sbjct: 65 MVDSVKDI-VKFVEE--NPVDVVGIDEIQFLGGERKEILEDI--NSLLYDGKTVVVAGLD 119
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
D+ F V D++P+ D +TK A C CG A+ + RK+++T+ +IG + Y P+C
Sbjct: 120 MDFEAHPFEIVKDLMPICDYITKHHAVCVKCGSDAWVSHRKSDDTQRVVIGAQNEYEPIC 179
Query: 252 RQHY 255
R Y
Sbjct: 180 RNCY 183
>gi|315230581|ref|YP_004071017.1| thymidine kinase [Thermococcus barophilus MP]
gi|315183609|gb|ADT83794.1| thymidine kinase [Thermococcus barophilus MP]
Length = 192
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++RI+ + R A+ K + D RY +V H+G++
Sbjct: 3 PEGFLEVITGPMFAGKTTELIKRIERQIFAKRKAALFKPSIDNRYSESEVVAHNGLRYEA 62
Query: 136 CAL-TTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
+ TT + + ++++VIG+DE QFF + + + AD +G VI AGL+ D
Sbjct: 63 YVIPTTEEGVKMIYEITERERLEVIGVDEVQFFPFSIVETLNKLAD-EGVYVIAAGLNLD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIY 247
+ F +++ AD++ LTA C CG A + R ++ L+GG + Y
Sbjct: 122 FKGDPFPVTKELLVRADNIVYLTAICTVCGAPATRSQRLINGKPAPRDSPVILVGGLESY 181
Query: 248 MPVCRQHYV 256
CR+H+V
Sbjct: 182 EARCRKHHV 190
>gi|389572380|ref|ZP_10162465.1| thymidine kinase [Bacillus sp. M 2-6]
gi|388427961|gb|EIL85761.1| thymidine kinase [Bacillus sp. M 2-6]
Length = 200
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG + VI G MF+GK+ L+RR + T + V + K D RY S+V+H+G
Sbjct: 3 VMKQSGWLEVICGSMFSGKSEELIRRAKRATFAKQEVKIFKPAIDNRYSTSSVVSHNGSS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ A+T+ ++ DVIGIDE QFF E + D + AD G VIVAGLD
Sbjct: 63 VDGIAVTSPKDIITHIS----ERTDVIGIDEVQFFDETIIDIVTQLADK-GYRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG V ++ A+ VTKL A C CG A T R + L+G +
Sbjct: 118 QDFRGEPFGVVPHLMACAELVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPIILVGAQE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|116668529|gb|ABK15525.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 157
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCCAL 138
+ +++GPMFAGK+T RR++ + GR +K D RY +S + H G P +
Sbjct: 3 LELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISA 62
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
L Q+ ++ D + +DE QFF DLY+ + GK VIVA LDGD++++
Sbjct: 63 GYLYEVMQRL-----EEYDAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQP 116
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEET 236
F V ++P+AD + KLTA C C R A FT+R ++ T
Sbjct: 117 FKQVTALVPMADKLDKLTAVCMKCKMRDAPFTVRISQGT 155
>gi|408369527|ref|ZP_11167308.1| thymidine kinase [Galbibacter sp. ck-I2-15]
gi|407745273|gb|EKF56839.1| thymidine kinase [Galbibacter sp. ck-I2-15]
Length = 226
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K + D RY +++HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPSVDNRYDDQMVISHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF E++ C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRL-----LADDCDVVGIDEAQFFDEEIVSVCNDLANK-GVRVVVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A ++ RK+ L+G ++ Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKSSNENLVLLGETEEYEPLSRAAY 186
>gi|70725917|ref|YP_252831.1| thymidine kinase [Staphylococcus haemolyticus JCSC1435]
gi|109892497|sp|Q4L800.1|KITH_STAHJ RecName: Full=Thymidine kinase
gi|68446641|dbj|BAE04225.1| thymidine kinase [Staphylococcus haemolyticus JCSC1435]
Length = 199
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+HDG +L
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHDGNELEA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+S+ R D VDVIGIDE QFF+ E +G V+VAGLD D+
Sbjct: 66 --INISTSRDILLQD-LSHVDVIGIDEIQFFDKEIVNIVEKLAENGHRVVVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + I+ +++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 123 EPFEPMPQIMAVSEQVTKLQAVCAVCGSSSSRTQRLIDGQPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|402297822|ref|ZP_10817568.1| thymidine kinase [Bacillus alcalophilus ATCC 27647]
gi|401726959|gb|EJT00164.1| thymidine kinase [Bacillus alcalophilus ATCC 27647]
Length = 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GK+ L+RR++ T V V K D RY D +V+H+G ++
Sbjct: 5 EGWIEVICGSMFSGKSEELIRRVRLVTFGKIKVQVFKPKIDNRYSDDEVVSHNGTRVVAM 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++ ++ +D V V+ IDE QFF E + C++ A+ G VI AGLD D+
Sbjct: 65 PISKSVDIIEEIEAD----VKVVAIDEIQFFDEQIIQVCQQLANQ-GIRVICAGLDQDFR 119
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG + ++ LA+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 120 GEPFGPIQPLLALAEEVTKLQAVCASCGAPASRTQRLLNGNPASYHDPVVLVGASEAYEP 179
Query: 250 VCR 252
CR
Sbjct: 180 RCR 182
>gi|427780919|gb|JAA55911.1| Putative thymidine kinase cytosolic [Rhipicephalus pulchellus]
Length = 128
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 13/117 (11%)
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
+TLS FR VIGIDE QFF D+ +F AD GK V++A LDG Y R+
Sbjct: 14 STLSGFR------------VIGIDEGQFFPDIVEFAEYMADT-GKVVVIAALDGTYQRQG 60
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F S++ ++PL++SV KL+A C C A +T R+ +E + E+IGG+D YM VCR Y
Sbjct: 61 FPSILTLVPLSESVIKLSAVCMVCYAEAAYTKRRGQEKEVEVIGGADKYMAVCRTCY 117
>gi|417002172|ref|ZP_11941561.1| thymidine kinase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479313|gb|EGC82409.1| thymidine kinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 207
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + V G MF+GKTT+L R + NV K + D+R IV+HD ++L
Sbjct: 10 GRLIVHTGSMFSGKTTSLWRELYRMKIAKYNVVAFKPSIDSRDDEKKIVSHDNLELDAIK 69
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGK------TVIVAGLD 191
+ L + ++ +D IGIDE QFF + D E D K T++V+GLD
Sbjct: 70 VENLKDILEYAKNN---DLDSIGIDEVQFFPNDPD---EVIDIFNKLMSMNITLVVSGLD 123
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
DY+ + F + +++P+AD + K A C CG+ A+ + RK+ E IG D+Y P+C
Sbjct: 124 MDYMTKPFEIIKELMPIADELVKHHAICASCGEDAWASYRKSAEDSRIQIGSEDLYEPLC 183
Query: 252 RQHY 255
R Y
Sbjct: 184 RSCY 187
>gi|427780929|gb|JAA55916.1| Putative thymidine kinase cytosolic [Rhipicephalus pulchellus]
Length = 128
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 13/117 (11%)
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRS 198
+TLS FR VIGIDE QFF D+ +F AD GK V++A LDG Y R+
Sbjct: 14 STLSDFR------------VIGIDEGQFFPDIVEFAEYMADT-GKVVVIAALDGTYQRQG 60
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F S++ ++PL++SV KL+A C C A +T R+ +E + E+IGG+D YM VCR Y
Sbjct: 61 FPSILTLVPLSESVIKLSAVCMVCYAEAAYTKRRGQEKEVEVIGGADKYMAVCRTCY 117
>gi|347535004|ref|YP_004842429.1| thymidine kinase [Flavobacterium branchiophilum FL-15]
gi|345528162|emb|CCB68192.1| Thymidine kinase [Flavobacterium branchiophilum FL-15]
Length = 194
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYDNEMVVSHDSNEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A ++ Q DV+GIDEAQFF+D + C + A+ +G VIVAGLD D
Sbjct: 74 VPAAANIAILAQG--------CDVVGIDEAQFFDDEIVKICNDLAN-NGIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A ++ RK ++G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPALMATAEYVTKVHAVCTRTGNLAHYSFRKKANDNLVMLGETNEYEPLSRA 184
Query: 254 HYVSG 258
+ +
Sbjct: 185 AFFNA 189
>gi|229020550|ref|ZP_04177294.1| Thymidine kinase [Bacillus cereus AH1273]
gi|229026770|ref|ZP_04183102.1| Thymidine kinase [Bacillus cereus AH1272]
gi|423388373|ref|ZP_17365599.1| thymidine kinase [Bacillus cereus BAG1X1-3]
gi|423416759|ref|ZP_17393848.1| thymidine kinase [Bacillus cereus BAG3X2-1]
gi|228734493|gb|EEL85155.1| Thymidine kinase [Bacillus cereus AH1272]
gi|228740745|gb|EEL90999.1| Thymidine kinase [Bacillus cereus AH1273]
gi|401109321|gb|EJQ17246.1| thymidine kinase [Bacillus cereus BAG3X2-1]
gi|401643561|gb|EJS61258.1| thymidine kinase [Bacillus cereus BAG1X1-3]
Length = 194
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ +N V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-NHVTEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|386857550|ref|YP_006261727.1| thymidine kinase [Deinococcus gobiensis I-0]
gi|380001079|gb|AFD26269.1| Thymidine kinase [Deinococcus gobiensis I-0]
Length = 202
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VIVGPMF+GK+ L+RR+ + VAV K D RY + + +H G
Sbjct: 8 GGHVEVIVGPMFSGKSEELIRRVTRAVIARQRVAVFKPALDDRYHVSHVASHAGRTAEAL 67
Query: 137 ALTTLSSFRQKF-GSDAY-----DQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAG 189
A+ + R G D + +DV+GIDEAQFF DL + AD G VIVAG
Sbjct: 68 AVPDAQAIRAHLTGEDVLLAAPVEALDVVGIDEAQFFGPDLVPLVLDLAD-AGVRVIVAG 126
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGG 243
LD D+ FG + +++ A+S KLTA C CG A + R + L+G
Sbjct: 127 LDLDFRAEPFGMMPELLARAESAEKLTAICTVCGAPATRSQRLIGGQPARYDDPVVLVGA 186
Query: 244 SDIYMPVCRQHY 255
+ Y CR H+
Sbjct: 187 QESYEARCRVHH 198
>gi|289550266|ref|YP_003471170.1| thymidine kinase [Staphylococcus lugdunensis HKU09-01]
gi|385783894|ref|YP_005760067.1| putative thymidine kinase [Staphylococcus lugdunensis N920143]
gi|418415217|ref|ZP_12988423.1| thymidine kinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418636156|ref|ZP_13198508.1| thymidine kinase [Staphylococcus lugdunensis VCU139]
gi|289179798|gb|ADC87043.1| Thymidine kinase [Staphylococcus lugdunensis HKU09-01]
gi|339894150|emb|CCB53414.1| putative thymidine kinase [Staphylococcus lugdunensis N920143]
gi|374841155|gb|EHS04634.1| thymidine kinase [Staphylococcus lugdunensis VCU139]
gi|410875224|gb|EKS23149.1| thymidine kinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 199
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ ++ S VDVIGIDE QFF+D + D + A+ +G VIVAGLD D+
Sbjct: 67 NIVAA----KEILSQDLTNVDVIGIDEVQFFDDQIVDIAEQLAE-NGHRVIVAGLDMDFK 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMP 249
F + ++ +++ VTKL A C CG + T R + K + L+G ++ Y P
Sbjct: 122 GEPFEPMPKLLAVSEQVTKLQAVCAVCGSPSSRTQRLINGQPAKIDDPIILVGANESYEP 181
Query: 250 VCRQHYV 256
CR H++
Sbjct: 182 RCRAHHI 188
>gi|308162539|gb|EFO64926.1| Thymidine kinase [Giardia lamblia P15]
Length = 392
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRN-VAVIKSNKDTRYGLDSIVTHDGVKLPCCALTT 140
+I+GPMFAGK+T L+ I A R V V+K DTRY S+ THD K+
Sbjct: 6 LILGPMFAGKSTELVG-IHARLVAARKRVLVVKHTFDTRYDDSSLTTHDNTKIAAKRAVL 64
Query: 141 LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
L F ++FG D + +DE QFF D+ ++A G V V+ L G++ R F
Sbjct: 65 LGEFAKEFG-----DYDALIVDEGQFFADIVSGVQDALSK-GLYVYVSALSGNFKREPFE 118
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY--VSG 258
+ + PLA ++ +A C C A F+ R + +T+ +IGG+++Y P CR + ++
Sbjct: 119 LIPRLFPLASAIYLRSAICAVCHAPAPFSARFSAQTEEIVIGGAELYAPTCRACWKSIAH 178
Query: 259 QVVVEAARIVLESQ 272
Q ++ AR + +S+
Sbjct: 179 QRSIKQARQLTDSE 192
>gi|205375310|ref|ZP_03228100.1| thymidine kinase [Bacillus coahuilensis m4-4]
Length = 206
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 10/185 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GK+ L+RR++ +++ V K D RY +S+V+H+G +
Sbjct: 7 TGWVEVICGSMFSGKSEELIRRVRRTQFAKQSLMVFKPKVDNRYSEESVVSHNGTSVMAK 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S +D +DV+ IDE QFF++ E + G VI+AGLD D+
Sbjct: 67 PVEHSSIILDTVTAD----IDVVAIDEVQFFDENIVNVVEKLANTGHRVILAGLDQDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
FG + ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 123 EPFGPMPALMAIAEQVTKLQAVCAVCGSPASRTQRLINGDPACYDDPIILVGASEAYEPR 182
Query: 251 CRQHY 255
CR H+
Sbjct: 183 CRHHH 187
>gi|254838359|gb|ACT83390.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 195
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCCALTTLSSFR 145
MFA K+T RR++ + G +K D RY +S + H G P + L
Sbjct: 2 MFAAKSTESCRRLERLSYSGPRCIAVKHGIDQRYTEESKVAMHSGATYPAISAGYLYEVM 61
Query: 146 QKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
Q+ ++ D + +DE QFF DLY+ + GK VIVA LDGD++++ F V +
Sbjct: 62 QRL-----EEYDAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQPFKQVTAL 115
Query: 206 IPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
+P+AD + KLTA C C R A FT+R ++ T +GG++ Y VCR
Sbjct: 116 VPMADKLDKLTAVCMKCKMRDAPFTVRISQGTDLVQVGGAESYQAVCR 163
>gi|308069585|ref|YP_003871190.1| thymidine kinase [Paenibacillus polymyxa E681]
gi|305858864|gb|ADM70652.1| Thymidine kinase [Paenibacillus polymyxa E681]
Length = 198
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
P+G I +I GPMF+ K+ L+RR Q Q G R V K +D RY D IV+ G +LP
Sbjct: 2 PTGRITIITGPMFSEKSGELIRRCQKLIQYGHRKVVAYKPAEDNRYAEDEIVSRIGYRLP 61
Query: 135 CCAL--TTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
++ Q+ + D DV+ DE QFF + +E A + GK VI GL+
Sbjct: 62 AISIPRKLTDELVQRILQETKD-ADVVAFDEVQFFSRHIMSLVQELAYY-GKHVIADGLN 119
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTE-----LIGGSD 245
DY + FG V ++ +AD + KLT+ C CG A FT R + +IG S+
Sbjct: 120 LDYRGKEFGYVGGLLAMADDIEKLTSFCAVCGSSEAVFTQRMVNGKPSTVGPIVMIGDSE 179
Query: 246 IYMPVCRQHYV 256
Y P CR ++
Sbjct: 180 AYEPRCRNCFI 190
>gi|315660274|ref|ZP_07913129.1| thymidine kinase [Staphylococcus lugdunensis M23590]
gi|315494701|gb|EFU83041.1| thymidine kinase [Staphylococcus lugdunensis M23590]
Length = 208
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 16 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAI 75
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ ++ S VDVIGIDE QFF+D + D + A+ +G VIVAGLD D+
Sbjct: 76 NIVAA----KEILSQDLTNVDVIGIDEVQFFDDQIVDIAEQLAE-NGHRVIVAGLDMDFK 130
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMP 249
F + ++ +++ VTKL A C CG + T R + K + L+G ++ Y P
Sbjct: 131 GEPFEPMPKLLAVSEQVTKLQAVCAVCGSPSSRTQRLINGQPAKIDDPIILVGANESYEP 190
Query: 250 VCRQHYV 256
CR H++
Sbjct: 191 RCRAHHI 197
>gi|417644450|ref|ZP_12294440.1| thymidine kinase [Staphylococcus warneri VCU121]
gi|445059135|ref|YP_007384539.1| thymidine kinase [Staphylococcus warneri SG1]
gi|330684819|gb|EGG96512.1| thymidine kinase [Staphylococcus epidermidis VCU121]
gi|443425192|gb|AGC90095.1| thymidine kinase [Staphylococcus warneri SG1]
Length = 199
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHNGNAIEA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ R+ D DVIGIDE QFF E++ ++ AD G VIVAGLD D+
Sbjct: 66 --INISTAREILNHD-LSHADVIGIDEVQFFDENIVSIIQQLADQ-GHRVIVAGLDMDFK 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
F + ++ L++ VTKL A C CG + T R + + L+G ++ Y P
Sbjct: 122 GEPFEPMPKLLALSEHVTKLQAVCAVCGGPSSRTQRLIDGQPAKADDPIILVGANESYEP 181
Query: 250 VCRQHYV 256
CR H++
Sbjct: 182 RCRAHHI 188
>gi|338210423|ref|YP_004654472.1| thymidine kinase [Runella slithyformis DSM 19594]
gi|336304238|gb|AEI47340.1| Thymidine kinase [Runella slithyformis DSM 19594]
Length = 195
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 68 HSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVT 127
H+ + G + V+ G MF+GKT L+RR+ + V + K D RY IV+
Sbjct: 7 HNSKNSQPRIGWVEVVCGSMFSGKTEELIRRLNRAKIARQKVEIFKPAIDKRYHDVDIVS 66
Query: 128 HDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVI 186
H+ + + T F D DV+GIDEAQF ++ L + C + A GK VI
Sbjct: 67 HNENSIRSTPVNTSEEILL-FAGDC----DVVGIDEAQFLDNNLVEVCNKLAG-SGKRVI 120
Query: 187 VAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDI 246
VAGLD D+ + FG + ++ +A+ VTK+ A C CG+ A ++ RK L+G +D
Sbjct: 121 VAGLDMDFAGKPFGPMPLLLSIAEYVTKVHAVCVVCGEVAQYSYRKVTSQDKILLGETDS 180
Query: 247 YMPVCRQHYVSGQV 260
Y CR+ Y G++
Sbjct: 181 YEARCRRCYTLGEL 194
>gi|152977516|ref|YP_001377033.1| thymidine kinase [Bacillus cytotoxicus NVH 391-98]
gi|189028749|sp|A7GV80.1|KITH_BACCN RecName: Full=Thymidine kinase
gi|152026268|gb|ABS24038.1| Thymidine kinase [Bacillus cytotoxicus NVH 391-98]
Length = 194
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ +N V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGMKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + D ++VI IDE QFF ED+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFKYVTED----MNVIAIDEVQFFDEDIVEVVQILANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEYVTKLQAVCSVCGSPASRTQRLINDEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|414161682|ref|ZP_11417936.1| thymidine kinase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410875394|gb|EKS23314.1| thymidine kinase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 199
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLKRGMYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
T+ + + F D VDVIGIDE QFFE + D +E A+ G VIVAGLD D+
Sbjct: 66 --ITIKAAEEIFEQD-LTGVDVIGIDEVQFFEHSVVDIAQELAEQ-GHRVIVAGLDMDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
F + ++ +++ VTKL A C CG A T R + ++G + Y P
Sbjct: 122 GEPFEPMPQLMAVSELVTKLQAVCAVCGAPASRTQRLINGRPAKADDPIIMVGADESYEP 181
Query: 250 VCRQHYV 256
CR H++
Sbjct: 182 RCRAHHI 188
>gi|42560701|ref|NP_975152.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|60390124|sp|Q8VVL0.1|KITH_MYCMS RecName: Full=Thymidine kinase
gi|17529627|emb|CAC85214.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC]
gi|42492197|emb|CAE76794.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
Length = 209
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S+ G I +I G MFAGKT +RR++ + + V K + D RY +++I++H
Sbjct: 10 EAYNSNKMGWIELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHS 69
Query: 130 GVKLPCCALTTLSSFRQKF-GSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
G KL + + +Q + QVDVIGIDE QFF++ E + G VIV
Sbjct: 70 GSKLDSYLVHSSDEIKQIIEKENQIQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVN 129
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD D+ F +V ++ A+ VTKL ARC CG A + + ++ L+
Sbjct: 130 GLDKDFRCLPFKNVDKLLVTAEFVTKLRARCHLCGNFANRSQKIVNGQPALWDSPLILVD 189
Query: 243 GSDIYMPVCRQHYV 256
G + Y CR ++
Sbjct: 190 GKESYEARCRNCFI 203
>gi|126662546|ref|ZP_01733545.1| putative thymidine kinase [Flavobacteria bacterium BAL38]
gi|126625925|gb|EAZ96614.1| putative thymidine kinase [Flavobacteria bacterium BAL38]
Length = 227
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 31 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDTRYHDEMVVSHDSNEIRSTP 90
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + R DV+GIDEAQFF E++ C + A+ G VIVAGLD D+
Sbjct: 91 VPVAENIRI-----LAQGCDVVGIDEAQFFDEEIVAVCNDLAN-SGIRVIVAGLDMDFKG 144
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A ++ RK+++ + ++G ++ Y P+ R Y
Sbjct: 145 NPFGPMPALMATAEYVTKVHAVCTRTGNLAHYSFRKSDDKRLVMLGETEEYEPLSRAAY 203
>gi|255536697|ref|YP_003097068.1| thymidine kinase [Flavobacteriaceae bacterium 3519-10]
gi|255342893|gb|ACU09006.1| Thymidine kinase [Flavobacteriaceae bacterium 3519-10]
Length = 196
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GKT L+RR++ G+NV + K DTRY + +V+H+ K+
Sbjct: 13 SGWMEVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDTRYAEEEVVSHNQNKIRST 72
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + GS DV+GIDEAQFF E + + + A+ G V++AGLD D++
Sbjct: 73 PVESPNEILL-LGSTC----DVVGIDEAQFFDESIVEVANKLAN-SGIRVVIAGLDMDFM 126
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R FG + +++ A+ VTK+ A C G A ++R T +G ++ Y V R+ +
Sbjct: 127 GRPFGPIPNLMATAEYVTKVHAICRRTGNLANHSMRITAGNDLVQLGETESYEAVSRKVF 186
>gi|312142771|ref|YP_003994217.1| thymidine kinase [Halanaerobium hydrogeniformans]
gi|311903422|gb|ADQ13863.1| Thymidine kinase [Halanaerobium hydrogeniformans]
Length = 197
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
+ SG I VI GPM+ GK+ L+RR++ + + V K+ D RY + +V+H G L
Sbjct: 5 TKSGWIEVITGPMYCGKSEELIRRLRRVKIAKQKIKVFKALIDDRYNKNDVVSHSGNSLE 64
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
+ ++ V+V+GIDEAQFF +DL + C + AD G VIVAGLD +
Sbjct: 65 AIPIEKADEILEQIDG----TVNVVGIDEAQFFHDDLIEICEKLADR-GIRVIVAGLDRN 119
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIY 247
+ FG + +++ A+ V KL A C CG+ A T R + L+ S++Y
Sbjct: 120 FRSEPFGPMPELMARAEYVDKLHAICIQCGEPASRTQRLINGEPAAYDDPVILVAASEVY 179
Query: 248 MPVCRQ-HYVSGQ 259
CR H V GQ
Sbjct: 180 EARCRSCHQVKGQ 192
>gi|313206650|ref|YP_004045827.1| thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383485955|ref|YP_005394867.1| thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|386321365|ref|YP_006017527.1| thymidine kinase [Riemerella anatipestifer RA-GD]
gi|407451496|ref|YP_006723220.1| thymidine kinase [Riemerella anatipestifer RA-CH-1]
gi|416112211|ref|ZP_11593176.1| thymidine kinase [Riemerella anatipestifer RA-YM]
gi|442314141|ref|YP_007355444.1| Thymidine kinase [Riemerella anatipestifer RA-CH-2]
gi|312445966|gb|ADQ82321.1| Thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|315022147|gb|EFT35176.1| thymidine kinase [Riemerella anatipestifer RA-YM]
gi|325335908|gb|ADZ12182.1| Thymidine kinase [Riemerella anatipestifer RA-GD]
gi|380460640|gb|AFD56324.1| thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|403312481|gb|AFR35322.1| Thymidine kinase [Riemerella anatipestifer RA-CH-1]
gi|441483064|gb|AGC39750.1| Thymidine kinase [Riemerella anatipestifer RA-CH-2]
Length = 195
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
L + + + SG + VI G MF+GKT L+RR++ G NV + K DTRY + +V
Sbjct: 3 LENTINHAKQSGWMEVICGSMFSGKTEELIRRLRRAEMAGLNVEIFKPKLDTRYSEEDVV 62
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTV 185
+H+ K+ A+ T + GS+ DV+GIDEAQFF+ + + + A+ +G V
Sbjct: 63 SHNRNKIRSTAVDTPNEILL-LGSNC----DVVGIDEAQFFDQGIVEVANQLAN-NGVRV 116
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
++AGLD D+ R FG + ++ A+ VTK+ A C+ G A +++R + +G ++
Sbjct: 117 VIAGLDMDFKGRPFGPMPYLMATAEYVTKVHAICKRTGNLANYSMRTSTSQDLVELGETE 176
Query: 246 IYMPVCRQHYV 256
Y V R+ +V
Sbjct: 177 SYEAVSRRVFV 187
>gi|390933448|ref|YP_006390953.1| thymidine kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|325668151|gb|ADZ44521.1| thymidine kinase [Cloning vector pMU1647]
gi|378753912|gb|AFC37774.1| thymidine kinase [Cloning vector pAMG258]
gi|389568949|gb|AFK85354.1| Thymidine kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|407943240|gb|AFU51871.1| thymidine kinase [Allelic replacement vector pAMG269]
gi|407943246|gb|AFU51876.1| thymidine kinase [Allelic replacement vector pAMG270]
gi|407943254|gb|AFU51883.1| thymidine kinase [CipA deletion vector pDGO-03]
gi|407943259|gb|AFU51887.1| thymidine kinase [CipA deletion vector pDGO-34]
gi|448872332|gb|AGE45857.1| thymidine kinase [cloning vector pMU2051]
Length = 192
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + A
Sbjct: 8 GYIEVVTGPMFSGKSEELIRRIKRAKIARQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIA 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S + A + DV IDE QFF+ ++ D +E AD GK VI AGLD D+
Sbjct: 68 IVKASDIL----AYAEEDTDVFAIDEVQFFDSEIVDIVKEIADS-GKRVICAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG +++ +A+ V KLTA C CG A T R + ++G + Y
Sbjct: 123 EPFGPTPELMAIAEFVDKLTAICMKCGNPATRTQRLINGKPANYDDPIIMVGAKESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|319893070|ref|YP_004149945.1| thymidine kinase [Staphylococcus pseudintermedius HKU10-03]
gi|317162766|gb|ADV06309.1| Thymidine kinase [Staphylococcus pseudintermedius HKU10-03]
Length = 200
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + IV+H+G ++
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPTIDDRYHKEKIVSHNGNEIEAI 66
Query: 137 ALTTLSS-FRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDY 194
++ S +R VD+IGIDE QFF+ D+ D + A+ G VI AGLD D+
Sbjct: 67 NISKASEIWRHDLNG-----VDIIGIDEIQFFDRDIVDIAQTLAER-GYRVITAGLDMDF 120
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYM 248
F V +++ +++ +TKL A C CG + T R + + L+G ++ Y
Sbjct: 121 KGEPFHPVPEMLAVSEHITKLQAVCAVCGASSSRTQRLIDGKPAKVDDPIILVGANESYE 180
Query: 249 PVCRQHYV 256
P CR H++
Sbjct: 181 PRCRAHHI 188
>gi|240047802|ref|YP_002961190.1| thymidine kinase [Mycoplasma conjunctivae HRC/581]
gi|239985374|emb|CAT05387.1| Thymidine kinase [Mycoplasma conjunctivae]
Length = 187
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI GPMF+GK+ L++R++ + N V+K D R+ IV+ G ++P
Sbjct: 7 EGIIEVITGPMFSGKSDELIKRVRTLSYANINTLVVKPKIDDRWTTHEIVSRSGARIPTF 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + F Y I +DE QFFE ++ + + A+ G VI +GLD DY
Sbjct: 67 NVQDTQEIKALFEQGDYQ---AIAVDEIQFFENEIIKYLDDLANK-GIRVIASGLDQDYA 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
R FG + ++ LA+SVTKL A C C + A + R + IG S+ Y CR
Sbjct: 123 RNPFGPLPQLMALAESVTKLQAICNICKRAATTSARIINSKEQTFIGDSEEYQARCR 179
>gi|384267241|ref|YP_005422948.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387900355|ref|YP_006330651.1| thymidine kinase [Bacillus amyloliquefaciens Y2]
gi|380500594|emb|CCG51632.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387174465|gb|AFJ63926.1| thymidine kinase [Bacillus amyloliquefaciens Y2]
Length = 196
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIGDLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPNLMAVAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|451943786|ref|YP_007464422.1| thymidine kinase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451903173|gb|AGF72060.1| thymidine kinase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 190
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI GPMFAGKT LL RI+ Q+G +V V+ D RYG + +H G+ P
Sbjct: 6 AGRLRVITGPMFAGKTEDLLHRIRGARQQGDDVVVVTHALDDRYGRRIVASHTGLSTPAH 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
A+T + G VD++ +DEAQFF L D G V +AGL +
Sbjct: 66 AVTDAEAV---AGLALARPVDLVAVDEAQFFGIGLVPVLNRILD-AGIPVDIAGLCMTFD 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTE------ETKTELIGGSDIYM 248
+ + ++ A+ +TKLTA CE CG+ AF LR E E+ +GG+++Y
Sbjct: 122 GGPYEPIATLMAHAEEITKLTAACEICGRDAAFHQLRHPEAHADARESSVARVGGAEMYE 181
Query: 249 PVCRQHY 255
CR+H+
Sbjct: 182 ARCRRHF 188
>gi|15828616|ref|NP_325976.1| thymidine kinase [Mycoplasma pulmonis UAB CTIP]
gi|14089558|emb|CAC13318.1| THYMIDINE KINASE [Mycoplasma pulmonis]
Length = 190
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI GPMF+GKT LLRR + +IK DTR+ + I++ GVK
Sbjct: 7 KGMIEVITGPMFSGKTEELLRRFRLLNYAKAKTLLIKPAFDTRFSKEEIISRAGVKTKTH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ R+ + +D + IDE FF+ D+ E A+ G +IV+GLD ++
Sbjct: 67 SVKNTEQIRKILEKEKFD---ALVIDEIHFFDFDIVYLIEELAN-SGYHIIVSGLDQNFK 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R F V ++ +A+ VTKL A C C + A T RK E + +L+G D Y CR+ +
Sbjct: 123 REPFEVVSYLLSIAEKVTKLQAICVKCQRAATTTFRKVESKEIKLLGDVDEYEARCRKCH 182
Query: 256 VSG 258
+ G
Sbjct: 183 IQG 185
>gi|390953808|ref|YP_006417566.1| thymidine kinase [Aequorivita sublithincola DSM 14238]
gi|390419794|gb|AFL80551.1| thymidine kinase [Aequorivita sublithincola DSM 14238]
Length = 219
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GK+ L+RR++ + V + + DTRY D++ +HD ++ P
Sbjct: 14 GWIEVISGSMFSGKSEELIRRLKRAKFARQKVEIFTPSIDTRYAEDAVTSHDSNQIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + D DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPILA--------DNCDVVGIDEAQFFDDEIVKVCNDLANR-GVRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y FG + ++ A+ VTK+ A C G A ++ RK + L+G ++ Y P+ R
Sbjct: 125 YKGNPFGPMPALMATAEYVTKVHAICTRTGNLAHYSYRKAKSEALVLLGETEEYEPLSRA 184
Query: 254 HYVSGQV 260
+ +
Sbjct: 185 AFFKAHL 191
>gi|333898005|ref|YP_004471879.1| thymidine kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113270|gb|AEF18207.1| Thymidine kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 192
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + A
Sbjct: 8 GYIEVVTGPMFSGKSEELIRRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIA 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S + A + DV IDE QFF+ ++ D +E AD GK VI AGLD D+
Sbjct: 68 IVKASDIL----TYAEEDTDVFAIDEIQFFDSEIVDIVKEIADS-GKRVICAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG +++ +A+ V KLTA C CG A T R + ++G + Y
Sbjct: 123 EPFGPTPELMAIAEFVDKLTAICMKCGNPATRTQRLINGRPANYDDPIIMVGAKESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|386819290|ref|ZP_10106506.1| thymidine kinase [Joostella marina DSM 19592]
gi|386424396|gb|EIJ38226.1| thymidine kinase [Joostella marina DSM 19592]
Length = 227
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFARQRVEIFKPAVDVRYDDEMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DV+GIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRL-----LADGCDVVGIDEAQFFDDEIVSVCNDLANK-GIRVVVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK+ K L+G ++ Y P+ R +
Sbjct: 128 NPFGPMPALMATAEYVTKVHAICTRTGNLANYSFRKSTNDKLVLLGETEEYEPLSRAAFF 187
Query: 257 SGQVVVEAARI 267
+ + +I
Sbjct: 188 KAMLREKVQKI 198
>gi|383449582|ref|YP_005356303.1| thymidine kinase [Flavobacterium indicum GPTSA100-9]
gi|380501204|emb|CCG52246.1| Thymidine kinase [Flavobacterium indicum GPTSA100-9]
Length = 197
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 94/182 (51%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+H+ ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYHEEMVVSHNKNEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + Q DVIGIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAENIRILAQG--------CDVIGIDEAQFFDDEIVAVCNDLAN-SGIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A F+ RK L+G +D Y P+ R
Sbjct: 125 FKGNPFGPMPALMATAEYVTKVHAVCTRTGNLAHFSYRKATSENLVLLGETDEYEPLSRA 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|394991252|ref|ZP_10384059.1| thymidine kinase [Bacillus sp. 916]
gi|393808024|gb|EJD69336.1| thymidine kinase [Bacillus sp. 916]
Length = 194
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIGDLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPNLMAVAESVTKLQAGCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|154687821|ref|YP_001422982.1| thymidine kinase [Bacillus amyloliquefaciens FZB42]
gi|385266615|ref|ZP_10044702.1| thymidine kinase [Bacillus sp. 5B6]
gi|452857330|ref|YP_007499013.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|166220759|sp|A7Z9S5.1|KITH_BACA2 RecName: Full=Thymidine kinase
gi|154353672|gb|ABS75751.1| Tdk [Bacillus amyloliquefaciens FZB42]
gi|385151111|gb|EIF15048.1| thymidine kinase [Bacillus sp. 5B6]
gi|452081590|emb|CCP23360.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 194
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIGDLSSLAD-KGYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPNLMAVAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|310642644|ref|YP_003947402.1| thymidine kinase [Paenibacillus polymyxa SC2]
gi|386041702|ref|YP_005960656.1| thymidine kinase [Paenibacillus polymyxa M1]
gi|309247594|gb|ADO57161.1| Thymidine kinase [Paenibacillus polymyxa SC2]
gi|343097740|emb|CCC85949.1| thymidine kinase [Paenibacillus polymyxa M1]
Length = 220
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 60 FSLQNRNLHSEASVSS-----PSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIK 113
FS + +L V P+G I +I GPMF+ K+ L+RR Q Q G R V K
Sbjct: 3 FSFGDEDLQRYVHVKRGEFALPTGRITIITGPMFSEKSGELIRRCQKLIQYGHRKVVAYK 62
Query: 114 SNKDTRYGLDSIVTHDGVKLPCCAL--TTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDL 170
+D RY D IV+ G +LP ++ Q+ + D DV+ DE QFF +
Sbjct: 63 PAEDNRYAEDEIVSRIGYRLPAISIPRKLTDELVQRILQETKD-ADVVAFDEVQFFSRHI 121
Query: 171 YDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFT 229
+E A + GK VI GL+ DY + FG V ++ +AD + KLT+ C CG A FT
Sbjct: 122 MSLIQELA-YCGKHVIADGLNLDYRGKEFGYVGGLLAMADDIEKLTSFCAVCGSSEAVFT 180
Query: 230 LRKTEETKTE-----LIGGSDIYMPVCRQHYV 256
R + +IG S+ Y P CR ++
Sbjct: 181 QRMVNGKPSTVGPIVMIGDSEAYEPRCRNCFI 212
>gi|85818654|gb|EAQ39814.1| Thymidine kinase [Dokdonia donghaensis MED134]
Length = 218
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDVRYDEEMVVSHDSNEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + D DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPILA--------DDCDVVGIDEAQFFDDEIVKVCNDLANR-GIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + +++ A+ VTK+ A C G A ++ RK + ++G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPNLMATAEYVTKVHAVCTRTGNLAQYSYRKAQGQDIVMLGETEEYEPLSRA 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|386318704|ref|YP_006014867.1| thymidine kinase [Staphylococcus pseudintermedius ED99]
gi|323463875|gb|ADX76028.1| thymidine kinase [Staphylococcus pseudintermedius ED99]
Length = 200
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + IV+H+G ++
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPTIDDRYHKEKIVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ S + VD+IGIDE QFF+ D+ D + A+ G VI AGLD D+
Sbjct: 67 NISKASEIWHH----DLNGVDIIGIDEIQFFDRDIVDIAQTLAER-GYRVITAGLDMDFK 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
F V +++ +++ +TKL A C CG + T R + + L+G ++ Y P
Sbjct: 122 GEPFHPVPEMLAVSEHITKLQAVCAVCGASSSRTQRLIDGKPAKVDDPIILVGANESYEP 181
Query: 250 VCRQHYV 256
CR H++
Sbjct: 182 RCRAHHI 188
>gi|47223840|emb|CAG06017.1| unnamed protein product [Tetraodon nigroviridis]
Length = 161
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 85/176 (48%), Gaps = 36/176 (20%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPMF+GK+T L+RR++ VIK KDTRY + THD +
Sbjct: 19 GQIQVIFGPMFSGKSTELMRRVRRFQLAQYKCLVIKYAKDTRYSDTGMATHDKNTMEAVP 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L+ R QV VIGIDE QF
Sbjct: 79 ANCLADVR-----SMALQVCVIGIDEGQF------------------------------- 102
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+FG++++++PLA+SV KL A C C K A +T R E + E+IGG+D Y VCR+
Sbjct: 103 AFGNILNLVPLAESVVKLNAVCMQCFKEAAYTKRIGAEKEVEVIGGADKYQAVCRK 158
>gi|94984685|ref|YP_604049.1| thymidine kinase [Deinococcus geothermalis DSM 11300]
gi|94554966|gb|ABF44880.1| Thymidine kinase [Deinococcus geothermalis DSM 11300]
Length = 219
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VIVGPMF+GK+ L+RR+ + VAV K D RY + +H G ++
Sbjct: 24 GGHLEVIVGPMFSGKSEELIRRVTRAVIARQRVAVFKPAIDDRYHATHVASHTGRRIEAV 83
Query: 137 ALTTLSSFRQKFG-------SDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVA 188
A+ ++ R S DV+G+DEAQFF DL E A+ G VI+A
Sbjct: 84 AVPDAAAIRAYLAGEGPLLSSPGTALPDVVGVDEAQFFGSDLGPLVLELAE-AGVRVILA 142
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD D+ FG + D++ A+SV KLTA C CG A + R + L+G
Sbjct: 143 GLDLDFRAEPFGCMPDLLARAESVEKLTAICTVCGAPATRSQRLIAGQPARFDDPVVLVG 202
Query: 243 GSDIYMPVCRQHY 255
+ Y CR H+
Sbjct: 203 AEEAYEARCRVHH 215
>gi|399927874|ref|ZP_10785232.1| thymidine kinase [Myroides injenensis M09-0166]
Length = 212
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAIDTRYDEEYVVSHDSNEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R G D DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANIR-ILG----DGCDVVGIDEAQFFDDEIISVCNDLANS-GVRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK ++G + Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAICTRTGNLANYSFRKAASEDLVMLGETQEYEPLSRAAYY 187
Query: 257 SGQVVVEAARIVLESQK 273
+ + E RI E ++
Sbjct: 188 NA--MRENERIKKEQRE 202
>gi|336172063|ref|YP_004579201.1| thymidine kinase [Lacinutrix sp. 5H-3-7-4]
gi|334726635|gb|AEH00773.1| Thymidine kinase [Lacinutrix sp. 5H-3-7-4]
Length = 215
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDVRYDDEMVVSHDSNEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + D DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPILA--------DGCDVVGIDEAQFFDDEIVRVCNDLANK-GIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + +++ A+ VTK+ A C G A F+ RK + L+G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPNLMATAEYVTKVHAVCTRTGNLAQFSYRKNKSEDLVLLGETEEYEPLSRA 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|297621129|ref|YP_003709266.1| Thymidine kinase [Waddlia chondrophila WSU 86-1044]
gi|297376430|gb|ADI38260.1| Thymidine kinase [Waddlia chondrophila WSU 86-1044]
Length = 209
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG++ VI G MF+GKT L+ R++ +NV IK D R IV+H GV+
Sbjct: 6 SGKLEVICGSMFSGKTEELMLRLRRAEYAKKNVMTIKHEIDNRKSYSCIVSHSGVERTAQ 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ VDV+GIDE QFF D GK V+VAGLD D+
Sbjct: 66 PIEPCKDGLNTLKRCVDGAVDVVGIDEIQFFPDEIIPILLMMVESGKRVLVAGLDMDFRC 125
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
FG V ++ LAD V KL A C CG A FT R + T L+GG + Y
Sbjct: 126 EPFGIVPTLMSLADEVCKLRAICVVCGNDANFTQRLINGKPAKYDDPTILVGGQECYEAR 185
Query: 251 CRQHY 255
CR+ Y
Sbjct: 186 CRRCY 190
>gi|374287502|ref|YP_005034587.1| thymidine kinase [Bacteriovorax marinus SJ]
gi|301166043|emb|CBW25617.1| thymidine kinase [Bacteriovorax marinus SJ]
Length = 213
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + V+ GPMF+GKT L+RR++ + + + K D RY +V+H +
Sbjct: 10 TGSVEVVCGPMFSGKTEELIRRVRRAQIAKQKIQIFKPALDDRYHETKVVSHSSQSVAAT 69
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + ++ YD ++ IDE QFF++ G VI+AGLD DY
Sbjct: 70 PVNSAVDILKRI----YDSTRIVAIDEVQFFDENIIKVVNKLSRRGVRVILAGLDQDYKG 125
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRK-TEETKTELIGGSDIYMPVCRQHY 255
FG + ++ +AD VTK+ A C CG A T RK T+ + L+G +D+Y C H+
Sbjct: 126 EPFGPMPHLMAIADDVTKVKAVCTSCGAPASKTHRKSTDNSDQVLVGEADLYEARCTAHW 185
>gi|154249483|ref|YP_001410308.1| thymidine kinase [Fervidobacterium nodosum Rt17-B1]
gi|154153419|gb|ABS60651.1| Thymidine kinase [Fervidobacterium nodosum Rt17-B1]
Length = 195
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+S+ G++ VIVGPM++GKTT LL + + + ++K DTRY D +VTH K
Sbjct: 1 MSNKIGKLTVIVGPMYSGKTTELLNYAEIYELGRKKILILKPQIDTRYSKDDVVTHKFFK 60
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+P A+ + + + S ++ D I IDE FF+ + DG V AGLD
Sbjct: 61 MPARAIKDVQEMEEYYKS-LNEKPDAIFIDEVHFFDSSLTKLVKEITKDGVDVYCAGLDM 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVC 251
+YL F + ++ +AD V K A CE CG+ + + +K +GG + Y+ VC
Sbjct: 120 NYLWDPFETTAMLMAVADEVIKKRAVCEVCGEYKGTLSYKKKSNGGIFDVGGKEKYIAVC 179
Query: 252 RQHY 255
++ Y
Sbjct: 180 KECY 183
>gi|378550159|ref|ZP_09825375.1| hypothetical protein CCH26_08726 [Citricoccus sp. CH26A]
Length = 201
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+GE+ VI GPMFAGK+ L+RR++ G +V V+ D R+G + +H G ++P
Sbjct: 17 AGELQVIAGPMFAGKSEELMRRVRRAWLAGLSVEVVNHALDVRHGSRDVASHAGQRIPAR 76
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + G A +D++ IDEAQFF DL A +G TV+V+GL +
Sbjct: 77 SVPDAAGL---AGLVAGQDLDLLAIDEAQFFGSDLVPVVTRLAG-EGLTVVVSGLCVTFD 132
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTL---------RKTEETKTELIGGSDI 246
F + ++ LA+ V KLTA C CG+ A F + R + E +GG++
Sbjct: 133 GLPFEPLPALMALAEEVVKLTAVCSVCGRDAAFHVRVVPSGTPSRAGGAARAEHVGGTET 192
Query: 247 YMPVCRQH 254
Y CR H
Sbjct: 193 YQARCRAH 200
>gi|224477107|ref|YP_002634713.1| thymidine kinase [Staphylococcus carnosus subsp. carnosus TM300]
gi|222421714|emb|CAL28528.1| thymidine kinase [Staphylococcus carnosus subsp. carnosus TM300]
Length = 199
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLKRGIFAKQKVVVFKPTIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ + QVDVIGIDE QFFE+ + + ++ A+ G VIVAGLD D+
Sbjct: 67 NIQKAEEILEH----DLTQVDVIGIDEVQFFENKIVEIAQDLAEQ-GHRVIVAGLDMDFK 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
R F + ++ +++ VTKL A C CG A T R + ++G + Y P
Sbjct: 122 GRPFEPMPQLLAVSELVTKLQAVCAVCGAPASRTQRLINGRPAKADDPVIMVGADESYEP 181
Query: 250 VCRQHYV 256
CR H++
Sbjct: 182 RCRAHHI 188
>gi|89095598|ref|ZP_01168492.1| thymidine kinase [Bacillus sp. NRRL B-14911]
gi|89089344|gb|EAR68451.1| thymidine kinase [Bacillus sp. NRRL B-14911]
Length = 206
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI G MF+GK+ L+RR++ + +AV K D RY +++V+H+G +
Sbjct: 8 GWVEVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPQIDNRYSEEAVVSHNGTSVIAKP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ + + D +++I IDE QFF+ ++ + AD G VI AGLD D+
Sbjct: 68 ISHSTDIFKHIDED----MEIIAIDEVQFFDAEVVKVIQHLAD-SGYRVIAAGLDQDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG + ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 123 EPFGQMPALMAIAELVTKLQAVCAVCGSPASRTQRLINGKPASYDDPVILVGASEAYEPR 182
Query: 251 CRQHY 255
CR H+
Sbjct: 183 CRHHH 187
>gi|423461886|ref|ZP_17438682.1| thymidine kinase [Bacillus cereus BAG5X2-1]
gi|401134063|gb|EJQ41682.1| thymidine kinase [Bacillus cereus BAG5X2-1]
Length = 194
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F A +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIFNHVA-EEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|257069370|ref|YP_003155625.1| thymidine kinase [Brachybacterium faecium DSM 4810]
gi|256560188|gb|ACU86035.1| thymidine kinase [Brachybacterium faecium DSM 4810]
Length = 191
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G +HVI GPMFAGKT LLRR+ G +V V DTR G + + TH G P
Sbjct: 6 AGRLHVIAGPMFAGKTEELLRRVHRAQLAGLDVQVFGHRLDTRGGAERLSTHAGRSAPAR 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + R G+ + D++ IDEAQFF E G V VAGL Y
Sbjct: 66 LVEQAAQLRAAIGA---TRPDLVAIDEAQFFGPPIVPVIEELLAAGIQVEVAGLCVTYEG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYMPV 250
F + ++ +A+ V KLTA C CG A F +R + L +GG++ Y
Sbjct: 123 GPFAPIPHLMAVAEEVVKLTAVCTVCGADAAFHVRLVADGADALQPTAAQVGGAESYQAR 182
Query: 251 CRQH 254
CR+H
Sbjct: 183 CRRH 186
>gi|157694100|ref|YP_001488562.1| thymidine kinase [Bacillus pumilus SAFR-032]
gi|194016233|ref|ZP_03054847.1| thymidine kinase [Bacillus pumilus ATCC 7061]
gi|166987680|sp|A8FID5.1|KITH_BACP2 RecName: Full=Thymidine kinase
gi|157682858|gb|ABV64002.1| thymidine kinase [Bacillus pumilus SAFR-032]
gi|194011706|gb|EDW21274.1| thymidine kinase [Bacillus pumilus ATCC 7061]
Length = 200
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SG + VI G MF+GK+ L+RR + T + V + K D RY S+V+H+G
Sbjct: 3 VMKQSGWLEVICGSMFSGKSEELIRRAKRATFAKQEVKIFKPAIDNRYSTSSVVSHNGSS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ A+ + ++ DVIGIDE QFF E + D + AD G VIVAGLD
Sbjct: 63 VDGIAVASPKDIITHIS----ERTDVIGIDEVQFFDETIIDIVTQLADK-GYRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ FG V ++ A+ VTKL A C CG A T R + L+G +
Sbjct: 118 QDFRGEPFGVVPHLMACAELVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPIILVGAQE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|397904180|ref|ZP_10505101.1| Thymidine kinase [Caloramator australicus RC3]
gi|343178927|emb|CCC58000.1| Thymidine kinase [Caloramator australicus RC3]
Length = 191
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +IVGPM++GK+ L+RRI+ + V V K + D RY + +V+H+G K +
Sbjct: 8 GWIEMIVGPMYSGKSEELIRRIKRAKIARQKVQVFKPSIDNRYSITEVVSHNGDKEGAHS 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + D DVI IDE QFF+D + + C++ AD GK VI AGLD D+
Sbjct: 68 VENSTEILNLVSEDT----DVIAIDEVQFFDDEIVEVCKKLADK-GKRVICAGLDLDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG V ++ +A+ V K+ A C CG A T R + L+G + Y
Sbjct: 123 EPFGPVPRLLAIAEFVDKIQAICVVCGNPATRTQRLINGKPAKYSDPIVLVGAKEAYEAR 182
Query: 251 CRQHYV 256
CR+ ++
Sbjct: 183 CRKCHI 188
>gi|149369297|ref|ZP_01889149.1| thymidine kinase [unidentified eubacterium SCB49]
gi|149356724|gb|EDM45279.1| thymidine kinase [unidentified eubacterium SCB49]
Length = 212
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFARQKVEIFKPAVDTRYDDEEVVSHDKNQIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
A + D DV+GIDEAQFF+ ++ C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPIL--------ADGCDVVGIDEAQFFDNEIVKVCNDLANR-GIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ + FG + ++ A+ VTK+ A C G A ++ RK+ L+G ++ Y P+ R
Sbjct: 125 FKGKPFGPMPALMATAEYVTKVHAVCPRTGNLANYSFRKSTSDDLVLLGETEEYEPLSRA 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|395222707|ref|ZP_10403173.1| thymidine kinase [Pontibacter sp. BAB1700]
gi|394452896|gb|EJF08014.1| thymidine kinase [Pontibacter sp. BAB1700]
Length = 197
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR+ + V + K D RY + +V+H+ +
Sbjct: 17 GWIEVICGSMFSGKTEELIRRLNRAKIAKQKVEIFKPTIDKRYHEEDVVSHNANAIRSTP 76
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ GS DV+GIDEAQFF+D L + C + A+ G VI AGLD DYL
Sbjct: 77 IDFAQDMLLLGGS-----CDVVGIDEAQFFDDGLAEVCVKLAN-SGVRVIAAGLDMDYLG 130
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ FG + ++ +A+ VTK+ A C CG A ++ R + L+G ++ Y CR +
Sbjct: 131 KPFGPMPALMAVAEYVTKVHAICVQCGDIATYSFRNALSEQQVLLGETESYEARCRHCFQ 190
Query: 257 SG 258
G
Sbjct: 191 EG 192
>gi|86144172|ref|ZP_01062509.1| putative thymidine kinase [Leeuwenhoekiella blandensis MED217]
gi|85829434|gb|EAQ47899.1| putative thymidine kinase [Leeuwenhoekiella blandensis MED217]
Length = 213
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 94/182 (51%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K DTRY + +++HD ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDTRYDDELVISHDANEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
A + D DVIGIDEAQFF E++ C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPILA--------DGCDVIGIDEAQFFDEEIVKVCNDLANR-GIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A F+ RK L+G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPALMATAEYVTKVHAVCTRTGNLAQFSYRKATSDDLVLLGETEEYEPLSRS 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|331703152|ref|YP_004399839.1| thymidine kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328801707|emb|CBW53860.1| Thymidine kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 209
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S+ G I +I G MFAGKT +RR++ + + V K + D RY +++I++H
Sbjct: 10 EAYNSNKMGWIELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHS 69
Query: 130 GVKLPCCALTTLSSFRQKF-GSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
G KL + + + + QVDVIGIDE QFF++ E + G VIV
Sbjct: 70 GSKLDSYLVHSSDEIKLIIEKENQIQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVN 129
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD D+ F +V ++ A+ VTKL ARC CG A + R ++ L+
Sbjct: 130 GLDKDFRCLPFKNVDKLLVTAEFVTKLRARCHLCGNFANRSQRIVNGQPALWDSPLILVD 189
Query: 243 GSDIYMPVCRQHYVS 257
G + Y CR +++
Sbjct: 190 GKESYEARCRNCFIA 204
>gi|226355534|ref|YP_002785274.1| thymidine kinase [Deinococcus deserti VCD115]
gi|259494452|sp|C1D0Z6.1|KITH_DEIDV RecName: Full=Thymidine kinase
gi|226317524|gb|ACO45520.1| putative thymidine kinase [Deinococcus deserti VCD115]
Length = 202
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 95/193 (49%), Gaps = 14/193 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VIVGPMF+GK+ L+RR+ + V V K D RY ++ +H G +
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRVTRALIARQRVQVFKPAVDDRYHESAVASHAGRTVGAL 67
Query: 137 ALTTLSSFRQKFGSDA------YDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAG 189
A+ ++ R +A + DVIGIDE QFF +L E AD G VI+AG
Sbjct: 68 AVGDVADIRAHLSGEAPLLQASAEMPDVIGIDEVQFFGPELVPLALELADA-GVRVILAG 126
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGG 243
LD D+ FG + D++ A+SV KLTA C CG A + R + L+G
Sbjct: 127 LDLDFRAEPFGCMPDLLARAESVEKLTAICTQCGAPATRSQRLISGEPARFDDPVVLVGA 186
Query: 244 SDIYMPVCRQHYV 256
+ Y CR H+V
Sbjct: 187 LESYEARCRLHHV 199
>gi|352681583|ref|YP_004892107.1| thymidine kinase [Thermoproteus tenax Kra 1]
gi|350274382|emb|CCC81027.1| Thymidine kinase [Thermoproteus tenax Kra 1]
Length = 178
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Query: 83 IVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLS 142
IVGPMFAGKTT L+R ++ + GR V K D RY D++ H+G K +
Sbjct: 5 IVGPMFAGKTTELIRLVERQVIAGRRAIVFKPTIDDRYDPDAVAAHNGAKYKAVRVAPDE 64
Query: 143 SFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
S G A ++ V+ +DE QFF L + E AD K V+ AGL+ DY +
Sbjct: 65 S-----GVGAIKELSASYQVVAVDEVQFFPPSLAEVLNELADE--KLVVAAGLNLDYRGQ 117
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F + + I+ AD V LTA C CG+ A T R + +GG+ +Y CR+H+
Sbjct: 118 PFETTMRIMAYADKVVSLTAVCTVCGRPATRTQRLAPGPRI-YVGGAGLYEARCRRHH 174
>gi|313679811|ref|YP_004057550.1| thymidine kinase [Oceanithermus profundus DSM 14977]
gi|313152526|gb|ADR36377.1| Thymidine kinase [Oceanithermus profundus DSM 14977]
Length = 194
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 8/186 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI GPMF+GK+ L+RR++ G+ V V K D RY +V+HDG ++
Sbjct: 8 TGWIEVIAGPMFSGKSEELIRRVKRVMIAGQKVRVFKPRLDDRYHKRDVVSHDGQRVEAE 67
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + + +A + V+ +DEAQFF+ E G VIVAGLD D+
Sbjct: 68 PVASAAELLAQV--EANGPLQVVAVDEAQFFDAALPEVLERLADRGIRVIVAGLDLDFRG 125
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
FG + ++ A+ V KL+A C CG+ A T R + E L+G + Y P
Sbjct: 126 EPFGPMPQLLARAEFVEKLSAVCVRCGRSATRTQRLIDGEPARYEDPVILVGAKEAYEPR 185
Query: 251 CRQHYV 256
CR +V
Sbjct: 186 CRGCHV 191
>gi|375364146|ref|YP_005132185.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|371570140|emb|CCF06990.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
Length = 196
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIGDLSLLAD-KGYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPNLMAVAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|345433308|dbj|BAK69311.1| thymidine kinase [Geobacillus stearothermophilus ATCC 7953]
Length = 207
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 95/190 (50%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + VI G M +GK+ L+RR++ + V V K D RY D +V+H+G
Sbjct: 3 VMTQSGWLEVICGCMLSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDEVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQ-FFEDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE Q F D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----TTDVVAIDEVQSFSNDIIDVVQTLAD-GGCRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLEAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>gi|261880586|ref|ZP_06007013.1| thymidine kinase [Prevotella bergensis DSM 17361]
gi|270332705|gb|EFA43491.1| thymidine kinase [Prevotella bergensis DSM 17361]
Length = 209
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ + V + K DTRY ++V+HD +
Sbjct: 13 GRIEVVCGSMFSGKTEELIRRMKRAKFARQKVEIFKPALDTRYSDVNVVSHDRNVIHSTP 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ DVIGIDEAQFF+ L D C ++ G VIVAGLD D+
Sbjct: 73 VENAEEILTRYAGH-----DVIGIDEAQFFDSKLVDVCNTMSNK-GVRVIVAGLDMDFRG 126
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
FGS+ + +AD VTK+ A C CG A+ + R ++G Y P+CR
Sbjct: 127 NPFGSIPALCAVADEVTKVHAICVRCGALAYASHRLVNVESQVMLGEKTEYEPLCR 182
>gi|258422881|ref|ZP_05685781.1| thymidine kinase [Staphylococcus aureus A9635]
gi|417891546|ref|ZP_12535608.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21200]
gi|418308970|ref|ZP_12920550.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21194]
gi|418889925|ref|ZP_13444053.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1524]
gi|257846905|gb|EEV70919.1| thymidine kinase [Staphylococcus aureus A9635]
gi|341851963|gb|EGS92865.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21200]
gi|365235972|gb|EHM76877.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21194]
gi|377751242|gb|EHT75175.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1524]
Length = 199
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + VDVIGIDE QFF+D E G VIVAGLD D+
Sbjct: 67 NISKASEIM----THDLTNVDVIGIDEVQFFDDEIVNIVEKLSSGGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 123 EPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>gi|212224382|ref|YP_002307618.1| thymidine kinase [Thermococcus onnurineus NA1]
gi|212009339|gb|ACJ16721.1| Thymidine kinase [Thermococcus onnurineus NA1]
Length = 192
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++RI+ + R A+ K D RY D IV H+G++
Sbjct: 3 PGGFLEVITGPMFAGKTTELIKRIERQMFAKRKAALFKPAIDNRYSEDEIVAHNGLRYEA 62
Query: 136 CALTTLSSFRQKFGS-DAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
+ T + G + +VIGIDE QFF + + AD DG VI +GL+ D
Sbjct: 63 FVIPTDEEGVRTIGEITKRENFEVIGIDEVQFFPMSIVETLDRLAD-DGVYVIASGLNLD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIY 247
+ F +++ AD++ LTA C CG+ A + R + ++ L+GG + Y
Sbjct: 122 FKGDPFPVTRELLVRADNIVYLTAVCTVCGRPATRSQRLIDGKPAPRDSPVILVGGRESY 181
Query: 248 MPVCRQHY 255
CR H+
Sbjct: 182 EARCRLHH 189
>gi|305665878|ref|YP_003862165.1| putative thymidine kinase [Maribacter sp. HTCC2170]
gi|88710653|gb|EAR02885.1| putative thymidine kinase [Maribacter sp. HTCC2170]
Length = 214
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDKRYHEEMVVSHDANEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D DVIGIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANIRI-----LADTCDVIGIDEAQFFDDEIVTVCNDLANR-GVRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A ++ RK L+G + Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKAHNDDLVLLGETGEYEPLSRAAY 186
>gi|304317932|ref|YP_003853077.1| thymidine kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302779434|gb|ADL69993.1| Thymidine kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 193
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + A
Sbjct: 9 GYIEVITGPMFSGKSEELIRRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIA 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S + A + DV IDE QF + ++ D +E AD GK VI AGLD D+
Sbjct: 69 IVKASEIL----TYAEEDTDVFAIDEVQFLDYEIVDIVKEIADS-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG +++ +A+ V KLTA C CG A T R + ++G + Y
Sbjct: 124 EPFGPTPELMAIAEFVDKLTAICMKCGNPATRTQRLINGKPANYDDPIIMVGAKESYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>gi|423471494|ref|ZP_17448238.1| thymidine kinase [Bacillus cereus BAG6O-2]
gi|402431511|gb|EJV63576.1| thymidine kinase [Bacillus cereus BAG6O-2]
Length = 194
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S + + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PV----SVSKDIFNHVTEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|171185643|ref|YP_001794562.1| thymidine kinase [Pyrobaculum neutrophilum V24Sta]
gi|170934855|gb|ACB40116.1| Thymidine kinase [Pyrobaculum neutrophilum V24Sta]
Length = 184
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 92/187 (49%), Gaps = 24/187 (12%)
Query: 83 IVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC------ 136
IVGPMFAGKTT L+RR++ GR V K + D RY S+ H+G+KL
Sbjct: 5 IVGPMFAGKTTELIRRVERYVIAGRRAVVFKPSIDARYDPASVAAHNGLKLNAVVVPPDE 64
Query: 137 -ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDY 194
+ + Q++ DV+ +DE QFF L D + A DG+ VI AGL+ D+
Sbjct: 65 GGVKAIYKLGQRY--------DVVAVDEVQFFPPALADVLNKLA--DGRVVIAAGLNLDF 114
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYM 248
F + ++ AD V LTA C+ CG+ A T R ++ ++GG + Y
Sbjct: 115 RGEPFETTARLMAYADRVISLTAVCKICGRPATRTQRLVAGKPAPRDSPRIVVGGVETYE 174
Query: 249 PVCRQHY 255
CR H+
Sbjct: 175 ARCRLHH 181
>gi|217077762|ref|YP_002335480.1| thymidine kinase [Thermosipho africanus TCF52B]
gi|419760361|ref|ZP_14286640.1| thymidine kinase [Thermosipho africanus H17ap60334]
gi|217037617|gb|ACJ76139.1| tdk thymidine kinase [Thermosipho africanus TCF52B]
gi|407514464|gb|EKF49279.1| thymidine kinase [Thermosipho africanus H17ap60334]
Length = 186
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ VI GPM++GKTT LL ++ + V K + D RYG D + TH G K+
Sbjct: 3 GKLTVITGPMYSGKTTELLSFVEIYNIGKKKTIVFKPSIDNRYGEDIVSTHTGFKVKAHK 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ ++ +D + IDE QFF E+L + R G V AGLD YL
Sbjct: 63 ISKSIEILNHISNN----IDAVFIDEVQFFDEELINVVRNLI-FKGIDVYCAGLDISYLE 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ F + +++ +AD V K A CE CG+ RA ++ + T++ K IGG + Y+ +CR+
Sbjct: 118 KPFKTTANLLAIADEVIKKKAVCEKCGEHRATYSFKITQDDKEIDIGGKEKYIALCRE 175
>gi|423328564|ref|ZP_17306371.1| hypothetical protein HMPREF9711_01945 [Myroides odoratimimus CCUG
3837]
gi|404605000|gb|EKB04616.1| hypothetical protein HMPREF9711_01945 [Myroides odoratimimus CCUG
3837]
Length = 210
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDTRYHDEFVVSHDSNEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + R D DV+GIDEAQFF E++ C + A+ G VIVAGLD D+
Sbjct: 74 VPSAAHIRL-----LADGCDVVGIDEAQFFDEEIVRVCNDLAN-SGIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK ++G + Y P+ R Y
Sbjct: 128 NPFGPMPYLMATAEYVTKVHAICTRSGNLANYSFRKAASEDIVMLGETQEYEPLSRAAYF 187
Query: 257 SG 258
+
Sbjct: 188 NA 189
>gi|365959349|ref|YP_004940916.1| thymidine kinase [Flavobacterium columnare ATCC 49512]
gi|365736030|gb|AEW85123.1| thymidine kinase [Flavobacterium columnare ATCC 49512]
Length = 208
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 13/185 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K + DTRY + +V+H+ ++ P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSIDTRYHEEMVVSHNKNEIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
A + Q DV+GIDEAQFF E++ C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIRILAQG--------CDVVGIDEAQFFDEEIVSVCNDLANA-GVRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A ++ RKT L+G ++ Y P+ R
Sbjct: 125 FKGNPFGPMPALMATAEYVTKVHAVCTKTGNLAHYSHRKTANDSLVLLGETEEYEPLSRA 184
Query: 254 HYVSG 258
Y +
Sbjct: 185 AYFNA 189
>gi|253747860|gb|EET02334.1| Thymidine kinase [Giardia intestinalis ATCC 50581]
Length = 390
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I+GPMFAGK+T L+ + V V+K DTRY + + THD K+ T L
Sbjct: 6 LILGPMFAGKSTELVGIHSRLIAAHKRVLVVKHTFDTRYNDNFLTTHDNTKISAKQATLL 65
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGS 201
F +F D D + +DE QFF D+ + A G V ++ L G++ R F
Sbjct: 66 GEFTGEF-----DNYDALIVDEGQFFADIVT-AVQCALSKGLYVYISALSGNFKREPFEV 119
Query: 202 VIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY--VSGQ 259
+ + PLA ++ +A C C A F+ R + +T+ +IGG+++Y P CR + ++ Q
Sbjct: 120 IPQLFPLASAIYLRSAICAICHAPAPFSARFSAQTEEIVIGGAEMYAPTCRTCWKSIAHQ 179
Query: 260 VVVEAARIVLESQ 272
++ A+ + +S+
Sbjct: 180 RAIKQAKQLTDSE 192
>gi|262037995|ref|ZP_06011407.1| cytosolic thymidine kinase [Leptotrichia goodfellowii F0264]
gi|261747948|gb|EEY35375.1| cytosolic thymidine kinase [Leptotrichia goodfellowii F0264]
Length = 361
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
E + S G + V+ G MF+GK+ L+RR++ + V V K D RYG I +H
Sbjct: 2 EFHLKSNMGTLEVVTGSMFSGKSEELIRRLRRAKYAKQKVIVFKHAIDNRYGEKGIFSHG 61
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVA 188
L ++ + + + +VIGIDE QFF + + DFC++ ++ GK VIVA
Sbjct: 62 NDSLEAYPASSTEQMEEIMVKN--NDAEVIGIDEVQFFGQSVVDFCKKYVEY-GKRVIVA 118
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIG 242
GLD + + + +++ +AD V KL A C CGK A+ + R + + ++G
Sbjct: 119 GLDMSFRAEPYHPMPELMGIADQVDKLHAICTVCGKPAYASQRLIDGEPAYYDDPLVMVG 178
Query: 243 GSDIYMPVCRQHYV 256
S+ Y CR+H++
Sbjct: 179 ASENYEARCRRHHI 192
>gi|344202570|ref|YP_004787713.1| thymidine kinase [Muricauda ruestringensis DSM 13258]
gi|343954492|gb|AEM70291.1| Thymidine kinase [Muricauda ruestringensis DSM 13258]
Length = 214
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 7/198 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K D RY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPIVDRRYHEEMVVSHDSNEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ R D +V+GIDEAQFF+D + C + A+ G V+VAGLD D+
Sbjct: 74 VPAAANIRL-----LADDCEVVGIDEAQFFDDEIVTVCNDLANR-GVRVVVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK+ L+G ++ Y P+ R +
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLANYSFRKSLNDNLVLLGETEEYEPLSRAAFY 187
Query: 257 SGQVVVEAARIVLESQKV 274
+ + + +ES++V
Sbjct: 188 KAMLREKIKEMDVESEEV 205
>gi|423399828|ref|ZP_17377001.1| thymidine kinase [Bacillus cereus BAG2X1-2]
gi|423451419|ref|ZP_17428272.1| thymidine kinase [Bacillus cereus BAG5X1-1]
gi|423479480|ref|ZP_17456195.1| thymidine kinase [Bacillus cereus BAG6X1-1]
gi|423484643|ref|ZP_17461332.1| thymidine kinase [Bacillus cereus BAG6X1-2]
gi|423670879|ref|ZP_17645908.1| thymidine kinase [Bacillus cereus VDM034]
gi|423672894|ref|ZP_17647833.1| thymidine kinase [Bacillus cereus VDM062]
gi|401138104|gb|EJQ45679.1| thymidine kinase [Bacillus cereus BAG6X1-2]
gi|401145748|gb|EJQ53270.1| thymidine kinase [Bacillus cereus BAG5X1-1]
gi|401295166|gb|EJS00791.1| thymidine kinase [Bacillus cereus VDM034]
gi|401310994|gb|EJS16302.1| thymidine kinase [Bacillus cereus VDM062]
gi|401657332|gb|EJS74843.1| thymidine kinase [Bacillus cereus BAG2X1-2]
gi|402425784|gb|EJV57930.1| thymidine kinase [Bacillus cereus BAG6X1-1]
Length = 194
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-NHVTEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|228955578|ref|ZP_04117580.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|423506786|ref|ZP_17483375.1| thymidine kinase [Bacillus cereus HD73]
gi|449092394|ref|YP_007424835.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228804106|gb|EEM50723.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|402446284|gb|EJV78146.1| thymidine kinase [Bacillus cereus HD73]
gi|449026151|gb|AGE81314.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 195
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGEPAAFDDPIILVGASETYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|421729889|ref|ZP_16169018.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075855|gb|EKE48839.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 196
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + ++ G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELVCGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIGDLSLLAD-KGYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPNLMAVAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|229099763|ref|ZP_04230688.1| Thymidine kinase [Bacillus cereus Rock3-29]
gi|423439971|ref|ZP_17416877.1| thymidine kinase [Bacillus cereus BAG4X2-1]
gi|423532398|ref|ZP_17508816.1| thymidine kinase [Bacillus cereus HuB2-9]
gi|228683652|gb|EEL37605.1| Thymidine kinase [Bacillus cereus Rock3-29]
gi|402421134|gb|EJV53399.1| thymidine kinase [Bacillus cereus BAG4X2-1]
gi|402464967|gb|EJV96654.1| thymidine kinase [Bacillus cereus HuB2-9]
Length = 195
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPYIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHIT----EELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFNDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|433656143|ref|YP_007299851.1| thymidine kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294332|gb|AGB20154.1| thymidine kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 192
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +I GPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + A
Sbjct: 8 GYIEIITGPMFSGKSEELIRRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIA 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S + A + DV IDE QF + ++ D +E AD GK VI AGLD D+
Sbjct: 68 IVKASEIL----TYAEEDTDVFAIDEVQFLDYEIVDIVKEIADS-GKRVICAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG +++ +A+ V KLTA C CG A T R + ++G + Y
Sbjct: 123 EPFGPTPELMAIAEFVDKLTAICMKCGNPATRTQRLINGKPANYDDPIIMVGAKESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|229076545|ref|ZP_04209505.1| Thymidine kinase [Bacillus cereus Rock4-18]
gi|228706578|gb|EEL58791.1| Thymidine kinase [Bacillus cereus Rock4-18]
Length = 195
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPYIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHIT----EELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFNDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|218900456|ref|YP_002448867.1| thymidine kinase [Bacillus cereus G9842]
gi|228903805|ref|ZP_04067921.1| Thymidine kinase [Bacillus thuringiensis IBL 4222]
gi|228911169|ref|ZP_04074975.1| Thymidine kinase [Bacillus thuringiensis IBL 200]
gi|228942477|ref|ZP_04105014.1| Thymidine kinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228968459|ref|ZP_04129448.1| Thymidine kinase [Bacillus thuringiensis serovar sotto str. T04001]
gi|228975409|ref|ZP_04135965.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228982046|ref|ZP_04142339.1| Thymidine kinase [Bacillus thuringiensis Bt407]
gi|384189419|ref|YP_005575315.1| thymidine kinase [Bacillus thuringiensis serovar chinensis CT-43]
gi|402563072|ref|YP_006605796.1| thymidine kinase [Bacillus thuringiensis HD-771]
gi|410677748|ref|YP_006930119.1| thymidine kinase Tdk [Bacillus thuringiensis Bt407]
gi|423362827|ref|ZP_17340327.1| thymidine kinase [Bacillus cereus VD022]
gi|423386819|ref|ZP_17364074.1| thymidine kinase [Bacillus cereus BAG1X1-2]
gi|423526849|ref|ZP_17503294.1| thymidine kinase [Bacillus cereus HuB1-1]
gi|423565779|ref|ZP_17542054.1| thymidine kinase [Bacillus cereus MSX-A1]
gi|434378449|ref|YP_006613093.1| thymidine kinase [Bacillus thuringiensis HD-789]
gi|452201835|ref|YP_007481916.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|226729735|sp|B7IQY3.1|KITH_BACC2 RecName: Full=Thymidine kinase
gi|218543303|gb|ACK95697.1| thymidine kinase [Bacillus cereus G9842]
gi|228777710|gb|EEM25984.1| Thymidine kinase [Bacillus thuringiensis Bt407]
gi|228784391|gb|EEM32414.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228791239|gb|EEM38852.1| Thymidine kinase [Bacillus thuringiensis serovar sotto str. T04001]
gi|228817219|gb|EEM63307.1| Thymidine kinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228848532|gb|EEM93380.1| Thymidine kinase [Bacillus thuringiensis IBL 200]
gi|228855832|gb|EEN00376.1| Thymidine kinase [Bacillus thuringiensis IBL 4222]
gi|326943128|gb|AEA19024.1| thymidine kinase [Bacillus thuringiensis serovar chinensis CT-43]
gi|401077101|gb|EJP85446.1| thymidine kinase [Bacillus cereus VD022]
gi|401193461|gb|EJR00467.1| thymidine kinase [Bacillus cereus MSX-A1]
gi|401630671|gb|EJS48469.1| thymidine kinase [Bacillus cereus BAG1X1-2]
gi|401791724|gb|AFQ17763.1| thymidine kinase [Bacillus thuringiensis HD-771]
gi|401877006|gb|AFQ29173.1| thymidine kinase [Bacillus thuringiensis HD-789]
gi|402454721|gb|EJV86511.1| thymidine kinase [Bacillus cereus HuB1-1]
gi|409176877|gb|AFV21182.1| thymidine kinase Tdk [Bacillus thuringiensis Bt407]
gi|452107228|gb|AGG04168.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 195
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + D +DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHITED----MDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|313899013|ref|ZP_07832540.1| thymidine kinase [Clostridium sp. HGF2]
gi|373123799|ref|ZP_09537643.1| hypothetical protein HMPREF0982_02572 [Erysipelotrichaceae
bacterium 21_3]
gi|422328568|ref|ZP_16409594.1| hypothetical protein HMPREF0981_02914 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312956212|gb|EFR37853.1| thymidine kinase [Clostridium sp. HGF2]
gi|371660065|gb|EHO25323.1| hypothetical protein HMPREF0981_02914 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371660494|gb|EHO25745.1| hypothetical protein HMPREF0982_02572 [Erysipelotrichaceae
bacterium 21_3]
Length = 197
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MFAGKT L+RRI+ + +AV K D RY + +V+H G
Sbjct: 7 EGWLEVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDDRYSEECVVSHCG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+T SF + +D + DVI IDE QFF E++ + C ADH GK V+VAGLD
Sbjct: 61 --STAKSFVINRAHEIFDYIDDSYDVIAIDEVQFFDEEIVEICDYFADH-GKRVMVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ F + + A+ VTKLTA C CG A + R + L+G S+
Sbjct: 118 MDFRGEPFSVMPQLFTHAEFVTKLTAVCTICGAPATRSQRLIDGRAARYDDPIILVGASE 177
Query: 246 IYMPVCRQ-HYVSGQVVV 262
Y CR H V G+ ++
Sbjct: 178 QYEARCRHCHEVPGKPLI 195
>gi|229033964|ref|ZP_04188917.1| Thymidine kinase [Bacillus cereus AH1271]
gi|228728339|gb|EEL79362.1| Thymidine kinase [Bacillus cereus AH1271]
Length = 194
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-THVTEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|229176006|ref|ZP_04303502.1| Thymidine kinase [Bacillus cereus MM3]
gi|228607499|gb|EEK64825.1| Thymidine kinase [Bacillus cereus MM3]
Length = 194
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-NHVTEEMDVIAIDEVQFFDGDIVEVVQILANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|392958775|ref|ZP_10324282.1| thymidine kinase [Bacillus macauensis ZFHKF-1]
gi|391875245|gb|EIT83858.1| thymidine kinase [Bacillus macauensis ZFHKF-1]
Length = 206
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GK+ L+RR++ NV V K D RY +S+V+H+G +
Sbjct: 7 NGWVEVICGSMFSGKSEELIRRVRRAKYGKLNVQVFKPLIDNRYSEESVVSHNGTAVIAE 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + +V+ IDE QFF ED+ + + AD G VIVAGLD D+
Sbjct: 67 PVGRSVDILKNVSPNT----EVVAIDEVQFFDEDVVEVVQTLADR-GIRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V +++ L++ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GEPFGRVPELMALSEDVTKLHAICMVCGSPASRTQRLIDGRPASYHDPIILVGASESYEP 181
Query: 250 VCRQ-HYVSGQ 259
CR H V G+
Sbjct: 182 RCRHCHEVPGK 192
>gi|225867311|ref|YP_002752689.1| thymidine kinase [Bacillus cereus 03BB102]
gi|229187556|ref|ZP_04314696.1| Thymidine kinase [Bacillus cereus BGSC 6E1]
gi|254807838|sp|C1F0Q7.1|KITH_BACC3 RecName: Full=Thymidine kinase
gi|225788312|gb|ACO28529.1| thymidine kinase [Bacillus cereus 03BB102]
gi|228595923|gb|EEK53603.1| Thymidine kinase [Bacillus cereus BGSC 6E1]
Length = 195
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQHYV 256
CR +V
Sbjct: 182 RCRHCHV 188
>gi|429506999|ref|YP_007188183.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429488589|gb|AFZ92513.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 194
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY +++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S ++ +D + DVI +DE QFF E + AD G VI AGLD
Sbjct: 61 --TSMTSHVISSSAEIWDHISESTDVIAVDEVQFFGESIIGDLSSLAD-KGYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +++ +A+SV KL A C CG A T R + + L+G S+
Sbjct: 118 MDFRGEPFGVVPNLMAVAESVMKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
>gi|375309111|ref|ZP_09774392.1| thymidine kinase [Paenibacillus sp. Aloe-11]
gi|375078420|gb|EHS56647.1| thymidine kinase [Paenibacillus sp. Aloe-11]
Length = 198
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
P+G I +I GPMF+ K+ L+RR Q Q G R V K +D RY D IV+ G +LP
Sbjct: 2 PTGRITIITGPMFSEKSGELIRRCQKLIQYGHRKVIAYKPAEDNRYATDEIVSRIGYRLP 61
Query: 135 CCAL--TTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
++ Q+ + + DV+ DE QFF + +E A + GK VI GL+
Sbjct: 62 AISIPRKLTDELVQRILEET-KEADVVAFDEVQFFSRHIMALIQELA-YCGKHVIADGLN 119
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTE-----LIGGSD 245
DY + FG + ++ +AD + KLT+ C CG A FT R + +IG S+
Sbjct: 120 LDYRGKEFGYIGGLLAMADDIEKLTSFCAVCGSSEAVFTQRMVNGKPSTVGPIVMIGDSE 179
Query: 246 IYMPVCRQHYV 256
Y P CR+ ++
Sbjct: 180 AYEPRCRKCFI 190
>gi|429220698|ref|YP_007182342.1| thymidine kinase [Deinococcus peraridilitoris DSM 19664]
gi|429131561|gb|AFZ68576.1| thymidine kinase [Deinococcus peraridilitoris DSM 19664]
Length = 202
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 14/192 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VIVGPMF+GK+ L+RR+ + VAV K D RY + +H G +
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRVTRAVIARQRVAVFKPAIDDRYHATHVASHSGRSVEAH 67
Query: 137 ALTTLSSFRQKFG------SDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAG 189
A+ + RQ S + DV+G DEAQFF+ L E A H G V++AG
Sbjct: 68 AVRSSEEVRQLLRGETPLLSGEVELPDVVGFDEAQFFDAGLVPLALELA-HAGVRVVMAG 126
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGG 243
LD D+ FG + D++ A+SV KLTA C CG A T R + L+G
Sbjct: 127 LDLDFRGEPFGVMPDLLARAESVEKLTAVCVECGAPATRTQRLIAGRPARYDDAVVLVGA 186
Query: 244 SDIYMPVCRQHY 255
+ Y CR H+
Sbjct: 187 QESYEARCRVHH 198
>gi|163943018|ref|YP_001647902.1| thymidine kinase [Bacillus weihenstephanensis KBAB4]
gi|229014500|ref|ZP_04171618.1| Thymidine kinase [Bacillus mycoides DSM 2048]
gi|229064981|ref|ZP_04200279.1| Thymidine kinase [Bacillus cereus AH603]
gi|229136149|ref|ZP_04264902.1| Thymidine kinase [Bacillus cereus BDRD-ST196]
gi|229170039|ref|ZP_04297730.1| Thymidine kinase [Bacillus cereus AH621]
gi|423369294|ref|ZP_17346725.1| thymidine kinase [Bacillus cereus VD142]
gi|423490476|ref|ZP_17467158.1| thymidine kinase [Bacillus cereus BtB2-4]
gi|423496199|ref|ZP_17472843.1| thymidine kinase [Bacillus cereus CER057]
gi|423497007|ref|ZP_17473624.1| thymidine kinase [Bacillus cereus CER074]
gi|423513223|ref|ZP_17489753.1| thymidine kinase [Bacillus cereus HuA2-1]
gi|423519995|ref|ZP_17496476.1| thymidine kinase [Bacillus cereus HuA2-4]
gi|423520839|ref|ZP_17497312.1| thymidine kinase [Bacillus cereus HuA4-10]
gi|423557155|ref|ZP_17533458.1| thymidine kinase [Bacillus cereus MC67]
gi|423595491|ref|ZP_17571521.1| thymidine kinase [Bacillus cereus VD048]
gi|423597412|ref|ZP_17573412.1| thymidine kinase [Bacillus cereus VD078]
gi|423659818|ref|ZP_17634987.1| thymidine kinase [Bacillus cereus VDM022]
gi|229486313|sp|A9VSC8.1|KITH_BACWK RecName: Full=Thymidine kinase
gi|163865215|gb|ABY46274.1| Thymidine kinase [Bacillus weihenstephanensis KBAB4]
gi|228613386|gb|EEK70520.1| Thymidine kinase [Bacillus cereus AH621]
gi|228647308|gb|EEL03390.1| Thymidine kinase [Bacillus cereus BDRD-ST196]
gi|228716282|gb|EEL67994.1| Thymidine kinase [Bacillus cereus AH603]
gi|228746850|gb|EEL96735.1| Thymidine kinase [Bacillus mycoides DSM 2048]
gi|401078179|gb|EJP86497.1| thymidine kinase [Bacillus cereus VD142]
gi|401149584|gb|EJQ57052.1| thymidine kinase [Bacillus cereus CER057]
gi|401157262|gb|EJQ64662.1| thymidine kinase [Bacillus cereus HuA2-4]
gi|401163208|gb|EJQ70558.1| thymidine kinase [Bacillus cereus CER074]
gi|401179936|gb|EJQ87099.1| thymidine kinase [Bacillus cereus HuA4-10]
gi|401193526|gb|EJR00531.1| thymidine kinase [Bacillus cereus MC67]
gi|401221962|gb|EJR28569.1| thymidine kinase [Bacillus cereus VD048]
gi|401238944|gb|EJR45376.1| thymidine kinase [Bacillus cereus VD078]
gi|401303957|gb|EJS09516.1| thymidine kinase [Bacillus cereus VDM022]
gi|402429239|gb|EJV61327.1| thymidine kinase [Bacillus cereus BtB2-4]
gi|402445859|gb|EJV77725.1| thymidine kinase [Bacillus cereus HuA2-1]
Length = 194
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RRI+ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-NHVTEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSECGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|451345137|ref|YP_007443768.1| thymidine kinase [Bacillus amyloliquefaciens IT-45]
gi|449848895|gb|AGF25887.1| thymidine kinase [Bacillus amyloliquefaciens IT-45]
Length = 196
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + ++ G MF+GK+ L+RR++ T + V V K D RY +++V+H+G +
Sbjct: 7 SGWLELVCGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSITSH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+++ + + DVI +DE QFF E + AD G VI AGLD D+
Sbjct: 67 VISSSAEIWDHIS----ENTDVIAVDEVQFFGESIIGDLSLLADK-GYRVIAAGLDMDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG V +++ +A+SVTKL A C CG A T R + + L+G S+ Y
Sbjct: 122 GEPFGVVPNLMAVAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGASESYEA 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>gi|30023361|ref|NP_834992.1| thymidine kinase [Bacillus cereus ATCC 14579]
gi|206970185|ref|ZP_03231138.1| thymidine kinase [Bacillus cereus AH1134]
gi|228924066|ref|ZP_04087342.1| Thymidine kinase [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228961594|ref|ZP_04123203.1| Thymidine kinase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229051001|ref|ZP_04194550.1| Thymidine kinase [Bacillus cereus AH676]
gi|229072797|ref|ZP_04205996.1| Thymidine kinase [Bacillus cereus F65185]
gi|229082545|ref|ZP_04215008.1| Thymidine kinase [Bacillus cereus Rock4-2]
gi|229112744|ref|ZP_04242277.1| Thymidine kinase [Bacillus cereus Rock1-15]
gi|229130580|ref|ZP_04259536.1| Thymidine kinase [Bacillus cereus BDRD-Cer4]
gi|229147871|ref|ZP_04276212.1| Thymidine kinase [Bacillus cereus BDRD-ST24]
gi|229153494|ref|ZP_04281672.1| Thymidine kinase [Bacillus cereus m1550]
gi|229181578|ref|ZP_04308904.1| Thymidine kinase [Bacillus cereus 172560W]
gi|229193582|ref|ZP_04320526.1| Thymidine kinase [Bacillus cereus ATCC 10876]
gi|296505755|ref|YP_003667455.1| thymidine kinase [Bacillus thuringiensis BMB171]
gi|365162711|ref|ZP_09358836.1| thymidine kinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410920|ref|ZP_17388040.1| thymidine kinase [Bacillus cereus BAG3O-2]
gi|423427421|ref|ZP_17404452.1| thymidine kinase [Bacillus cereus BAG3X2-2]
gi|423433295|ref|ZP_17410299.1| thymidine kinase [Bacillus cereus BAG4O-1]
gi|423438735|ref|ZP_17415716.1| thymidine kinase [Bacillus cereus BAG4X12-1]
gi|423583502|ref|ZP_17559613.1| thymidine kinase [Bacillus cereus VD014]
gi|423632651|ref|ZP_17608396.1| thymidine kinase [Bacillus cereus VD154]
gi|423633825|ref|ZP_17609478.1| thymidine kinase [Bacillus cereus VD156]
gi|423651172|ref|ZP_17626742.1| thymidine kinase [Bacillus cereus VD169]
gi|423658246|ref|ZP_17633545.1| thymidine kinase [Bacillus cereus VD200]
gi|38372297|sp|Q814U0.1|KITH_BACCR RecName: Full=Thymidine kinase
gi|29898922|gb|AAP12193.1| Thymidine kinase [Bacillus cereus ATCC 14579]
gi|87312647|gb|ABD37689.1| thymidine kinase [Bacillus cereus]
gi|206734762|gb|EDZ51931.1| thymidine kinase [Bacillus cereus AH1134]
gi|228589887|gb|EEK47762.1| Thymidine kinase [Bacillus cereus ATCC 10876]
gi|228601946|gb|EEK59441.1| Thymidine kinase [Bacillus cereus 172560W]
gi|228630098|gb|EEK86749.1| Thymidine kinase [Bacillus cereus m1550]
gi|228635521|gb|EEK92010.1| Thymidine kinase [Bacillus cereus BDRD-ST24]
gi|228652919|gb|EEL08801.1| Thymidine kinase [Bacillus cereus BDRD-Cer4]
gi|228670725|gb|EEL26036.1| Thymidine kinase [Bacillus cereus Rock1-15]
gi|228700977|gb|EEL53500.1| Thymidine kinase [Bacillus cereus Rock4-2]
gi|228710288|gb|EEL62263.1| Thymidine kinase [Bacillus cereus F65185]
gi|228722378|gb|EEL73774.1| Thymidine kinase [Bacillus cereus AH676]
gi|228798076|gb|EEM45080.1| Thymidine kinase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228835556|gb|EEM80921.1| Thymidine kinase [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|296326807|gb|ADH09735.1| thymidine kinase [Bacillus thuringiensis BMB171]
gi|363617876|gb|EHL69246.1| thymidine kinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401108760|gb|EJQ16690.1| thymidine kinase [Bacillus cereus BAG3X2-2]
gi|401109258|gb|EJQ17184.1| thymidine kinase [Bacillus cereus BAG3O-2]
gi|401112346|gb|EJQ20225.1| thymidine kinase [Bacillus cereus BAG4O-1]
gi|401115862|gb|EJQ23708.1| thymidine kinase [Bacillus cereus BAG4X12-1]
gi|401209562|gb|EJR16321.1| thymidine kinase [Bacillus cereus VD014]
gi|401259297|gb|EJR65473.1| thymidine kinase [Bacillus cereus VD154]
gi|401279450|gb|EJR85376.1| thymidine kinase [Bacillus cereus VD169]
gi|401282425|gb|EJR88325.1| thymidine kinase [Bacillus cereus VD156]
gi|401287976|gb|EJR93738.1| thymidine kinase [Bacillus cereus VD200]
Length = 195
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|57641253|ref|YP_183731.1| thymidine kinase [Thermococcus kodakarensis KOD1]
gi|73920109|sp|Q5JGT7.1|KITH_PYRKO RecName: Full=Thymidine kinase
gi|57159577|dbj|BAD85507.1| Thymidine kinase [Thermococcus kodakarensis KOD1]
Length = 197
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++R++ + R A+ K D RY +V H+G++
Sbjct: 6 PGGFLEVITGPMFAGKTTELIKRVERQIFAKRKAALFKPAIDNRYSEREVVAHNGLRYEA 65
Query: 136 CALTTLSSFRQKFGSDAYDQ-VDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGD 193
+ T ++ ++ +VIGIDE QFF + + E AD G VI +GL+ D
Sbjct: 66 FVVPTTEKGVERIKEITLNEGYEVIGIDEVQFFPMSVVEALNELADQ-GIYVIASGLNLD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIY 247
+ F +++ AD++ LTA C CGK A + R + + L+GG + Y
Sbjct: 125 FKGDPFPVTKELLVRADNIVYLTAVCTVCGKPATRSQRLIDGKPAPRNSPVILVGGRESY 184
Query: 248 MPVCRQHYV 256
CR+H++
Sbjct: 185 EARCREHHL 193
>gi|424828078|ref|ZP_18252819.1| thymidine kinase [Clostridium sporogenes PA 3679]
gi|365979561|gb|EHN15614.1| thymidine kinase [Clostridium sporogenes PA 3679]
Length = 191
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPM++GKT L+RRI+ + V V K D RY +V+H G K+
Sbjct: 8 GWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +K D DVIGIDEAQFF+D L + + A+++ + VI AGLD D+
Sbjct: 68 VKSSKEILEKL----LDDTDVIGIDEAQFFDDSLVEIVSKIANNN-RRVICAGLDMDFKG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG + +++ +A+ V K+ A C C A T R + LIG + Y
Sbjct: 123 EPFGPMPELMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|229105923|ref|ZP_04236547.1| Thymidine kinase [Bacillus cereus Rock3-28]
gi|228677497|gb|EEL31750.1| Thymidine kinase [Bacillus cereus Rock3-28]
Length = 195
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R T L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPATFNDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|229164278|ref|ZP_04292211.1| Thymidine kinase [Bacillus cereus R309803]
gi|228619218|gb|EEK76111.1| Thymidine kinase [Bacillus cereus R309803]
Length = 195
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + D +DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHITED----MDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLINGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|126031066|pdb|2JA1|A Chain A, Thymidine Kinase From B. Cereus With Ttp Bound As
Phosphate Donor
Length = 197
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 9 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 68
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 69 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 124 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 183
Query: 250 VCRQ 253
CR
Sbjct: 184 RCRH 187
>gi|218232456|ref|YP_002370107.1| thymidine kinase [Bacillus cereus B4264]
gi|226729736|sp|B7HFM8.1|KITH_BACC4 RecName: Full=Thymidine kinase
gi|218160413|gb|ACK60405.1| thymidine kinase [Bacillus cereus B4264]
Length = 195
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGDPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|229000117|ref|ZP_04159687.1| Thymidine kinase [Bacillus mycoides Rock3-17]
gi|229007637|ref|ZP_04165231.1| Thymidine kinase [Bacillus mycoides Rock1-4]
gi|228753648|gb|EEM03092.1| Thymidine kinase [Bacillus mycoides Rock1-4]
gi|228759654|gb|EEM08630.1| Thymidine kinase [Bacillus mycoides Rock3-17]
Length = 194
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWVEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ D + VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-NHITEEMDVIAIDEVQFFDGDIVEVVQILANRDYR-VIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|423618968|ref|ZP_17594801.1| thymidine kinase [Bacillus cereus VD115]
gi|401252444|gb|EJR58705.1| thymidine kinase [Bacillus cereus VD115]
Length = 195
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFNDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|42784502|ref|NP_981749.1| thymidine kinase [Bacillus cereus ATCC 10987]
gi|60390046|sp|Q72XC1.1|KITH_BACC1 RecName: Full=Thymidine kinase
gi|42740434|gb|AAS44357.1| thymidine kinase [Bacillus cereus ATCC 10987]
Length = 195
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQHY 255
CR +
Sbjct: 182 RCRHXH 187
>gi|407707803|ref|YP_006831388.1| Nucleoid occlusion protein [Bacillus thuringiensis MC28]
gi|407385488|gb|AFU15989.1| Thymidine kinase [Bacillus thuringiensis MC28]
Length = 195
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFNDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|440780058|ref|ZP_20958646.1| thymidine kinase [Clostridium pasteurianum DSM 525]
gi|440221734|gb|ELP60938.1| thymidine kinase [Clostridium pasteurianum DSM 525]
Length = 194
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPM++GK+ L+RRI+ + V V K D RY LD +V+H G K A
Sbjct: 8 GWIEVIVGPMYSGKSEELIRRIRRAKIAKQKVQVFKPEIDNRYSLDDVVSHCGEKEE--A 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ +S Q+ + + +DV+ IDE QFF E++ D + +D GK VI AGLD D+
Sbjct: 66 ISVKNS--QEIVNFIEEDIDVLAIDEVQFFDENIIDILTKISDS-GKRVICAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG V ++ +A+ V K+ A C CG A T R LIG + Y
Sbjct: 123 EPFGCVPKLMAIAEFVDKIQAICMCCGNPATRTQRLINGKPANYNDSIILIGAKESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|357289813|gb|AET73126.1| thymidine kinase [Phaeocystis globosa virus 12T]
gi|357292613|gb|AET73949.1| thymidine kinase [Phaeocystis globosa virus 14T]
Length = 184
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPCCAL 138
+ +I+G MF+GKTT L+ + E N I D RY S IV+HD V L C ++
Sbjct: 3 LEIIIGCMFSGKTTALIEK-YMEKSTNYNCLAINYIFDKRYTDKSKIVSHDKVALNCISI 61
Query: 139 TTLSSFRQK-FGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L+ D + + + I I+EAQFF DL + + D K V++ GL+ DY R
Sbjct: 62 QDLNELTNNPEYLDMFCKAEYIFINEAQFFVDLKKWVINSMDIHNKNVVLCGLNLDYKRE 121
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG ++D+ A ++ + +C C + FT R ++ LIG S+ Y+PVC + +
Sbjct: 122 KFGELMDLTMYATNIVQTFGKCYDCENSSLFTHRLVDDNSQVLIGSSE-YIPVCEECW 178
>gi|309777875|ref|ZP_07672820.1| thymidine kinase [Erysipelotrichaceae bacterium 3_1_53]
gi|308914359|gb|EFP60154.1| thymidine kinase [Erysipelotrichaceae bacterium 3_1_53]
Length = 198
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 98/195 (50%), Gaps = 21/195 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MFAGKT L+RRI+ + +AV K D RY D +V+H G
Sbjct: 7 EGWLEVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDDRYSEDCVVSHCG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+T SF + +D + DVI IDE QFF E++ + C ADH GK V+VAGLD
Sbjct: 61 --STAKSFVISRAHEIFDYIDDSYDVIAIDEVQFFDEEIVEICDYFADH-GKRVMVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
D+ F + + A+ VTKLTA C CG A + R + + L+G S+
Sbjct: 118 MDFRGEPFSVMPQLFTHAEFVTKLTAVCTKCGAPATRSQRLIDGRPARYDDPIILVGASE 177
Query: 246 IYMPVCRQ-HYVSGQ 259
Y CR H V G+
Sbjct: 178 QYEARCRHCHEVPGK 192
>gi|392390129|ref|YP_006426732.1| thymidine kinase [Ornithobacterium rhinotracheale DSM 15997]
gi|390521207|gb|AFL96938.1| thymidine kinase [Ornithobacterium rhinotracheale DSM 15997]
Length = 196
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT L+RR++ G+ V + K D RY +V+HD K
Sbjct: 13 TGWIEVICGSMFSGKTEELIRRVKRAELAGQKVEIFKPAIDKRYDEQDVVSHDENKKQAT 72
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S+ SD DV+GIDEAQFF++ + GK +I+AGLD D+
Sbjct: 73 PIEASSNL-PILASDC----DVVGIDEAQFFDEGIVEVANLLANSGKRIIIAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
R FG + +++ +A+ VTK+ A C G A ++ RK + K +G Y P+ R
Sbjct: 128 RPFGPMPNLMAVAEYVTKVHAICVKTGNLANYSHRKIKSDKLVELGERAEYEPLSR 183
>gi|229118826|ref|ZP_04248175.1| Thymidine kinase [Bacillus cereus Rock1-3]
gi|423376874|ref|ZP_17354158.1| thymidine kinase [Bacillus cereus BAG1O-2]
gi|423449869|ref|ZP_17426748.1| thymidine kinase [Bacillus cereus BAG5O-1]
gi|423463042|ref|ZP_17439810.1| thymidine kinase [Bacillus cereus BAG6O-1]
gi|423542334|ref|ZP_17518724.1| thymidine kinase [Bacillus cereus HuB4-10]
gi|423548564|ref|ZP_17524922.1| thymidine kinase [Bacillus cereus HuB5-5]
gi|423621629|ref|ZP_17597407.1| thymidine kinase [Bacillus cereus VD148]
gi|228664627|gb|EEL20120.1| Thymidine kinase [Bacillus cereus Rock1-3]
gi|401127558|gb|EJQ35277.1| thymidine kinase [Bacillus cereus BAG5O-1]
gi|401168781|gb|EJQ76036.1| thymidine kinase [Bacillus cereus HuB4-10]
gi|401174937|gb|EJQ82141.1| thymidine kinase [Bacillus cereus HuB5-5]
gi|401262927|gb|EJR69061.1| thymidine kinase [Bacillus cereus VD148]
gi|401639968|gb|EJS57701.1| thymidine kinase [Bacillus cereus BAG1O-2]
gi|402422373|gb|EJV54611.1| thymidine kinase [Bacillus cereus BAG6O-1]
Length = 195
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSTCGSPASRTQRLIDGEPAAFNDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|163786833|ref|ZP_02181281.1| 2-amino-3-ketobutyrate coenzyme A ligase [Flavobacteriales
bacterium ALC-1]
gi|159878693|gb|EDP72749.1| 2-amino-3-ketobutyrate coenzyme A ligase [Flavobacteriales
bacterium ALC-1]
Length = 215
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 13/182 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL---P 134
G I VI G MF+GKT L+RR++ + V + K D RY D +V+HD + P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFARQKVEIFKPAIDVRYDDDEVVSHDANSIRSTP 73
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
A + D DV+GIDEAQFF+D + C + A+ G VIVAGLD D
Sbjct: 74 VPAAANIPILA--------DGCDVVGIDEAQFFDDEIVRVCNDLANK-GIRVIVAGLDMD 124
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG + ++ A+ VTK+ A C G A ++ RK + L+G D Y P+ R
Sbjct: 125 FKGNPFGPMPYLMATAEYVTKVHAICTKTGNLAQYSYRKAKSDDLVLLGEVDEYEPLSRA 184
Query: 254 HY 255
Y
Sbjct: 185 AY 186
>gi|423589152|ref|ZP_17565238.1| thymidine kinase [Bacillus cereus VD045]
gi|401224391|gb|EJR30945.1| thymidine kinase [Bacillus cereus VD045]
Length = 195
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSDEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|312794308|ref|YP_004027231.1| thymidine kinase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181448|gb|ADQ41618.1| Thymidine kinase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 189
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 8/184 (4%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTH-DGV 131
+++ G++ V G MF+GKTT LL ++ G + + K + DTRY + +V H
Sbjct: 2 INNYVGKLIVYTGSMFSGKTTQLLETLRRFQIAGYSTMLFKPSIDTRYSISEVVNHPKNY 61
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH--DGKTVIVAG 189
+ ++ + + + V VIGIDE QF + ++ + KT+I+AG
Sbjct: 62 RFSAVSIEYIEDIER-----YAENVQVIGIDEFQFIKSIFGPLKTINKLLLRDKTIIIAG 116
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMP 249
LD D+ R F S+ +++P+AD V KL A C CG+ A+ + R T+E + +IG + Y P
Sbjct: 117 LDIDFQGRPFESMKEVLPVADYVYKLHAICVNCGQDAWISHRITDEGERIVIGAEEKYQP 176
Query: 250 VCRQ 253
+CR+
Sbjct: 177 LCRR 180
>gi|255917856|pdb|3E2I|A Chain A, Crystal Structure Of Thymidine Kinase From S. Aureus
Length = 219
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 90/186 (48%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G F+GK+ L+RR++ + V V K D RY + +V+H+G +
Sbjct: 27 SGWIECITGSXFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI 86
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ S + + VDVIGIDE QFF+D E DG VIVAGLD D+
Sbjct: 87 NISKAS----EIXTHDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDXDFRG 142
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + +++ VTKL A C CG + T R + L+G ++ Y P
Sbjct: 143 EPFEPXPKLXAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPR 202
Query: 251 CRQHYV 256
CR H++
Sbjct: 203 CRAHHI 208
>gi|47570472|ref|ZP_00241105.1| thymidine kinase [Bacillus cereus G9241]
gi|218906508|ref|YP_002454342.1| thymidine kinase [Bacillus cereus AH820]
gi|228917939|ref|ZP_04081475.1| Thymidine kinase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228949051|ref|ZP_04111323.1| Thymidine kinase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229124834|ref|ZP_04254012.1| Thymidine kinase [Bacillus cereus 95/8201]
gi|226729734|sp|B7JHF2.1|KITH_BACC0 RecName: Full=Thymidine kinase
gi|47552868|gb|EAL11286.1| thymidine kinase [Bacillus cereus G9241]
gi|218536221|gb|ACK88619.1| thymidine kinase [Bacillus cereus AH820]
gi|228658625|gb|EEL14287.1| Thymidine kinase [Bacillus cereus 95/8201]
gi|228810624|gb|EEM56973.1| Thymidine kinase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228841736|gb|EEM86847.1| Thymidine kinase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 194
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|442322498|ref|YP_007362519.1| thymidine kinase [Myxococcus stipitatus DSM 14675]
gi|441490140|gb|AGC46835.1| thymidine kinase [Myxococcus stipitatus DSM 14675]
Length = 199
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR+Q + V V K D RY +V+H +K+
Sbjct: 9 GWIEVICGSMFSGKTEELIRRVQRAVYGKQKVQVFKPRIDNRYDETQVVSHSKLKVTSTP 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L K D V+GIDE QFF EA + G VI AGLD DY R
Sbjct: 69 LERAEEIFYKLEPDT----QVVGIDEVQFFGAEVVAVVEALANKGLRVICAGLDQDYQGR 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F + ++ +A+ VTK A C CG A + R + ++G + Y P CR+ +V
Sbjct: 125 PFEPMPQLMAVAEYVTKELAICVVCGNPANRSQRLVSSGERVVVGAAGAYEPRCRKCHV 183
>gi|384183195|ref|YP_005568957.1| thymidine kinase [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324329279|gb|ADY24539.1| thymidine kinase [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 195
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|89889689|ref|ZP_01201200.1| thymidine kinase [Flavobacteria bacterium BBFL7]
gi|89517962|gb|EAS20618.1| thymidine kinase [Flavobacteria bacterium BBFL7]
Length = 212
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + + + K D RY +++V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAHQKIEIFKPAIDVRYDEENVVSHDSNEIQSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ +D DV+GIDEAQFF+D + C + A+ G VIVAGLD D+
Sbjct: 74 VPAAANI-PLLAADC----DVVGIDEAQFFDDEIVTVCNDLANR-GIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + ++ A+ VTK+ A C G A F+ RK+ + ++G Y P+ R Y
Sbjct: 128 NPFGPMPALMATAEYVTKVHAVCTRTGNLAQFSYRKSSDENVVMLGEQQEYEPLSRGAY 186
>gi|451927588|gb|AGF85466.1| thymidine kinase-like protein [Moumouvirus goulette]
Length = 206
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-GLDS----IVTHDGVKLP 134
I I+GPMF+GKTT +R I+ + G+ +IK +D R+ +D+ ++TH+ +K
Sbjct: 3 ITTIIGPMFSGKTTEFIRLIERKKLAGKKCLIIKHLQDNRFEEIDAKEKHVITHNKIKYK 62
Query: 135 CCALTTLSSF-RQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
C + + +KF D++G++E FF +L FC A+ + + VIV+ +D
Sbjct: 63 NCDIVYNNDLMNEKFLEYVMINYDIVGVEEGFFFNNLAIFCNYLANENIE-VIVSTIDSS 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFC-GKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y + + +I +++++ KL A C C A FT+R T++ + LIGGSD+Y VCR
Sbjct: 122 YKQEIPQEIGKLIAISENLIKLKAVCMQCKNTDASFTIRTTDDEQDILIGGSDMYQSVCR 181
>gi|158321609|ref|YP_001514116.1| thymidine kinase [Alkaliphilus oremlandii OhILAs]
gi|158141808|gb|ABW20120.1| Thymidine kinase [Alkaliphilus oremlandii OhILAs]
Length = 195
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
S G I VIVGPM+AGK+ L+RR+ V K D RY + I +H G ++
Sbjct: 8 SKGGSIEVIVGPMYAGKSEELMRRVNRCRIANLKVLSFKPAIDNRYSTNHITSHSGKQME 67
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
C +SS + G DV+ IDE QF ED+ C++AAD GK VI +GLD D
Sbjct: 68 C---IPVSSPEEILGHLENKDFDVLAIDEVQFLGEDIVKICKDAADM-GKRVICSGLDMD 123
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIY 247
+ F V +++ +A+ VTKLTA C C A T R + ++G + Y
Sbjct: 124 FRGEPFQVVPNLMAIAEYVTKLTAVCMKCKVPATRTQRIVNGKPAKYDDPIIMVGAKESY 183
Query: 248 MPVCR 252
CR
Sbjct: 184 EARCR 188
>gi|49480415|ref|YP_039323.1| thymidine kinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118480365|ref|YP_897516.1| thymidine kinase [Bacillus thuringiensis str. Al Hakam]
gi|217962819|ref|YP_002341397.1| thymidine kinase [Bacillus cereus AH187]
gi|222098802|ref|YP_002532860.1| thymidine kinase [Bacillus cereus Q1]
gi|229142073|ref|ZP_04270598.1| Thymidine kinase [Bacillus cereus BDRD-ST26]
gi|229199456|ref|ZP_04326119.1| Thymidine kinase [Bacillus cereus m1293]
gi|300117844|ref|ZP_07055611.1| thymidine kinase [Bacillus cereus SJ1]
gi|375287354|ref|YP_005107793.1| thymidine kinase [Bacillus cereus NC7401]
gi|402554578|ref|YP_006595849.1| thymidine kinase [Bacillus cereus FRI-35]
gi|423355811|ref|ZP_17333435.1| thymidine kinase [Bacillus cereus IS075]
gi|423375117|ref|ZP_17352454.1| thymidine kinase [Bacillus cereus AND1407]
gi|423571877|ref|ZP_17548114.1| thymidine kinase [Bacillus cereus MSX-A12]
gi|423573018|ref|ZP_17549137.1| thymidine kinase [Bacillus cereus MSX-D12]
gi|423608326|ref|ZP_17584218.1| thymidine kinase [Bacillus cereus VD102]
gi|60390011|sp|Q6HAV3.1|KITH_BACHK RecName: Full=Thymidine kinase
gi|166220760|sp|A0RLB6.1|KITH_BACAH RecName: Full=Thymidine kinase
gi|226729737|sp|B7HY90.1|KITH_BACC7 RecName: Full=Thymidine kinase
gi|254807839|sp|B9IRW3.1|KITH_BACCQ RecName: Full=Thymidine kinase
gi|49331971|gb|AAT62617.1| thymidine kinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118419590|gb|ABK88009.1| thymidine kinase [Bacillus thuringiensis str. Al Hakam]
gi|217063013|gb|ACJ77263.1| thymidine kinase [Bacillus cereus AH187]
gi|221242861|gb|ACM15571.1| thymidine kinase [Bacillus cereus Q1]
gi|228584032|gb|EEK42187.1| Thymidine kinase [Bacillus cereus m1293]
gi|228641362|gb|EEK97668.1| Thymidine kinase [Bacillus cereus BDRD-ST26]
gi|298724708|gb|EFI65383.1| thymidine kinase [Bacillus cereus SJ1]
gi|358355881|dbj|BAL21053.1| thymidine kinase [Bacillus cereus NC7401]
gi|401081836|gb|EJP90109.1| thymidine kinase [Bacillus cereus IS075]
gi|401092994|gb|EJQ01115.1| thymidine kinase [Bacillus cereus AND1407]
gi|401199301|gb|EJR06205.1| thymidine kinase [Bacillus cereus MSX-A12]
gi|401216487|gb|EJR23199.1| thymidine kinase [Bacillus cereus MSX-D12]
gi|401238335|gb|EJR44776.1| thymidine kinase [Bacillus cereus VD102]
gi|401795788|gb|AFQ09647.1| thymidine kinase [Bacillus cereus FRI-35]
Length = 195
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|385326656|ref|YP_005881088.1| thymidine kinase [Mycoplasma pneumoniae FH]
gi|301633252|gb|ADK86806.1| thymidine kinase [Mycoplasma pneumoniae FH]
Length = 224
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTR--YGLDSIVTHDGV 131
SP G I VI GPMF+GKT LLR+I+ V + K DTR + + S H
Sbjct: 17 QSPRGWIEVICGPMFSGKTEELLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDE 76
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
+ + + + K D+ DV+ IDEAQFF ++ + G VIV+GLD
Sbjct: 77 AIEINSPLEIYDYLTK------DRFDVVAIDEAQFFSSEIVEVVKSLNDLGINVIVSGLD 130
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR-KTEETKTELIGGSDIYMPV 250
D+ FGS+ ++ +AD + KL A C CG+ A T R ++ +T LIG + Y P
Sbjct: 131 TDFRAEPFGSIPQLLAIADKICKLDAVCNVCGQLAQRTQRIVSKSNETVLIGDIEAYEPR 190
Query: 251 CR-QHYVSGQVV 261
C+ H+V G+ V
Sbjct: 191 CKLHHHVQGKPV 202
>gi|350566573|ref|ZP_08935230.1| thymidine kinase [Peptoniphilus indolicus ATCC 29427]
gi|348662577|gb|EGY79235.1| thymidine kinase [Peptoniphilus indolicus ATCC 29427]
Length = 195
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 95/189 (50%), Gaps = 22/189 (11%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP--- 134
G + V G MF+GKT++L R I+ G K DTR I THD L
Sbjct: 6 GRLIVHTGSMFSGKTSSLEREIKRFQIAGYKTVAFKPKLDTRGEEQRISTHDNTHLNAVM 65
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE--------DLYDFCREAADHDGKTVI 186
C + T++ + + ++VDVIGIDE QF E + +F R+ KTV+
Sbjct: 66 CDNIDTIAEYIEN------NKVDVIGIDEVQFLEGDIQRILDQIDEFLRKK-----KTVV 114
Query: 187 VAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDI 246
VAGLD D+ F V +++ AD + K A C CG A+ + RK+++T +IG SD
Sbjct: 115 VAGLDMDFEANPFDLVKELMARADYLYKHHAVCTVCGADAWVSHRKSKDTNRIVIGASDE 174
Query: 247 YMPVCRQHY 255
Y P+CR Y
Sbjct: 175 YEPLCRNCY 183
>gi|159109869|ref|XP_001705197.1| Thymidine kinase [Giardia lamblia ATCC 50803]
gi|157433278|gb|EDO77523.1| Thymidine kinase [Giardia lamblia ATCC 50803]
Length = 392
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I+GPMFAGK+T L+ + V V+K DTRY +S+ THD ++ L
Sbjct: 6 LILGPMFAGKSTELVGIHARLVAAHKRVLVVKHTFDTRYDDNSLTTHDNTRIAAKRAVLL 65
Query: 142 SSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGS 201
+FG D + +DE QFF D+ ++A G V V+ L G++ R F
Sbjct: 66 GELATEFG-----DYDALIVDEGQFFADIVSGVQDALS-KGLYVYVSALSGNFKREPFEL 119
Query: 202 VIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY--VSGQ 259
+ + PLA ++ +A C C A F+ R + +T+ +IGG+++Y P CR + ++ Q
Sbjct: 120 IPRLFPLASAIYLRSAICAICHAPAPFSARFSAQTEEIVIGGAELYAPTCRTCWKSIAHQ 179
Query: 260 VVVEAARIVLESQ 272
++ AR + +S+
Sbjct: 180 RSIKKARQLTDSE 192
>gi|373109040|ref|ZP_09523320.1| hypothetical protein HMPREF9712_00913 [Myroides odoratimimus CCUG
10230]
gi|423129290|ref|ZP_17116965.1| hypothetical protein HMPREF9714_00365 [Myroides odoratimimus CCUG
12901]
gi|423132953|ref|ZP_17120600.1| hypothetical protein HMPREF9715_00375 [Myroides odoratimimus CIP
101113]
gi|371645734|gb|EHO11256.1| hypothetical protein HMPREF9712_00913 [Myroides odoratimimus CCUG
10230]
gi|371649053|gb|EHO14535.1| hypothetical protein HMPREF9714_00365 [Myroides odoratimimus CCUG
12901]
gi|371649710|gb|EHO15187.1| hypothetical protein HMPREF9715_00375 [Myroides odoratimimus CIP
101113]
Length = 210
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD ++
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDTRYHDEFVVSHDSNEIRSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + R D DV+GIDEAQFF E++ C + A+ G VIVAGLD D+
Sbjct: 74 VPSAAHIRL-----LADGCDVVGIDEAQFFDEEIVRVCNDLAN-SGIRVIVAGLDMDFKG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A ++ RK ++G + Y P+ R +
Sbjct: 128 NPFGPMPYLMATAEYVTKVHAICTRSGNLANYSFRKAASEDIVMLGETQEYEPLSRAAFF 187
Query: 257 SG 258
+
Sbjct: 188 NA 189
>gi|444915123|ref|ZP_21235260.1| Thymidine kinase [Cystobacter fuscus DSM 2262]
gi|444713863|gb|ELW54753.1| Thymidine kinase [Cystobacter fuscus DSM 2262]
Length = 200
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V V K D RY +V+H +KL A
Sbjct: 9 GWIEVICGSMFSGKTEELIRRVKRAVYGKQTVQVFKPKLDNRYDETQVVSHSQLKLTSVA 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + V+GIDE QFF ++ C EA H G VIVAGLD DY
Sbjct: 69 IERAEEIFHHLSP----RTQVVGIDEVQFFGSEVVAVC-EALAHRGLRVIVAGLDQDYQG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
R F + ++ +A+ VTK A C CG A + R + + ++G + Y CR+
Sbjct: 124 RPFEPMPQLLAVAEYVTKQLAICVVCGNPAHRSQRLVDRGERVVVGAAGAYEARCRK 180
>gi|377822351|ref|YP_005175277.1| thymidine kinase [Mycoplasma pneumoniae 309]
gi|358640319|dbj|BAL21613.1| thymidine kinase [Mycoplasma pneumoniae 309]
gi|440453225|gb|AGC03984.1| Thymidine kinase [Mycoplasma pneumoniae M129-B7]
Length = 216
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTR--YGLDSIVTHDGV 131
SP G I VI GPMF+GKT LLR+I+ V + K DTR + + S H
Sbjct: 9 QSPRGWIEVICGPMFSGKTEELLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDE 68
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
+ + + + K D+ DV+ IDEAQFF ++ + G VIV+GLD
Sbjct: 69 AIEINSPLEIYDYLTK------DRFDVVAIDEAQFFSSEIVEVVKSLNDLGINVIVSGLD 122
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR-KTEETKTELIGGSDIYMPV 250
D+ FGS+ ++ +AD + KL A C CG+ A T R ++ +T LIG + Y P
Sbjct: 123 TDFRAEPFGSIPQLLAIADKICKLDAVCNVCGQLAQRTQRIVSKSNETVLIGDIEAYEPR 182
Query: 251 CR-QHYVSGQVV 261
C+ H+V G+ V
Sbjct: 183 CKLHHHVQGKPV 194
>gi|407478352|ref|YP_006792229.1| thymidine kinase [Exiguobacterium antarcticum B7]
gi|407062431|gb|AFS71621.1| Thymidine kinase [Exiguobacterium antarcticum B7]
Length = 206
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GK+ L+RR++ V V K D RY + +V+H G +
Sbjct: 9 GWIEVICGSMFSGKSEELIRRVRRAQYGKLPVQVFKPAIDDRYHEEHVVSHGGNSVIAIP 68
Query: 138 LTTLSSFRQKFGSDAY----DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
+ T D Y ++ V+ IDE QFF+D EA DGK VI AGLD D
Sbjct: 69 MAT--------SRDVYVAVAEETQVVAIDEVQFFDDEIVSVIEALAQDGKRVICAGLDQD 120
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIY 247
+ FG + +++ A+ VTKL A C CG A T R + L+G S+ Y
Sbjct: 121 FRAEPFGKMPELLARAEFVTKLQAICLSCGDPASRTQRLIDGQPANYHDPIILVGASESY 180
Query: 248 MPVCRQ-HYVSGQ 259
P CR H V G+
Sbjct: 181 EPRCRHCHQVPGK 193
>gi|423613470|ref|ZP_17589330.1| thymidine kinase [Bacillus cereus VD107]
gi|401241760|gb|EJR48140.1| thymidine kinase [Bacillus cereus VD107]
Length = 194
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-NHVTEEMDVIAIDEVQFFDGDIVEVVQILANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSECGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|15616341|ref|NP_244646.1| thymidine kinase [Bacillus halodurans C-125]
gi|20138749|sp|Q9K6F0.1|KITH_BACHD RecName: Full=Thymidine kinase
gi|10176404|dbj|BAB07498.1| thymidine kinase [Bacillus halodurans C-125]
Length = 204
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MF+GK+ L+RR++ T V V K D RY +V+H+G K+
Sbjct: 7 EGWIEVICGSMFSGKSEELIRRVRRATYGRLKVQVFKPAIDNRYSEQEVVSHNGNKVCAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S +++ D D++ IDE QFF ED+ ADH G VI AGLD D+
Sbjct: 67 PVERAMSILEQWSED----TDIVAIDEVQFFDEDVIGVVDYLADH-GVRVICAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
F ++ +A+ VTKL A C CG A T R + L+G ++ Y P
Sbjct: 122 GEPFEPTRTLMAMAEYVTKLQAICPVCGSPASRTQRLIDGKPASYHDPIILVGAAEAYEP 181
Query: 250 VCRQ-HYVSGQ 259
CR H V+ +
Sbjct: 182 RCRHCHQVTNK 192
>gi|52140232|ref|YP_086599.1| thymidine kinase [Bacillus cereus E33L]
gi|228930338|ref|ZP_04093342.1| Thymidine kinase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228936615|ref|ZP_04099409.1| Thymidine kinase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|301056798|ref|YP_003795009.1| thymidine kinase [Bacillus cereus biovar anthracis str. CI]
gi|423554216|ref|ZP_17530542.1| thymidine kinase [Bacillus cereus ISP3191]
gi|60389923|sp|Q630R8.1|KITH_BACCZ RecName: Full=Thymidine kinase
gi|51973701|gb|AAU15251.1| thymidine kinase [Bacillus cereus E33L]
gi|228823050|gb|EEM68888.1| Thymidine kinase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228829324|gb|EEM74957.1| Thymidine kinase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|300378967|gb|ADK07871.1| thymidine kinase [Bacillus cereus biovar anthracis str. CI]
gi|401181355|gb|EJQ88506.1| thymidine kinase [Bacillus cereus ISP3191]
Length = 195
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFKHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|126031057|pdb|2J9R|A Chain A, Thymidine Kinase From B. Anthracis In Complex With Dt
Length = 214
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 27 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 86
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 87 PVSASKDIFKHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 141
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 142 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 201
Query: 250 VCRQ 253
CR
Sbjct: 202 RCRH 205
>gi|30265353|ref|NP_847730.1| thymidine kinase [Bacillus anthracis str. Ames]
gi|47530892|ref|YP_022241.1| thymidine kinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49188165|ref|YP_031418.1| thymidine kinase [Bacillus anthracis str. Sterne]
gi|165871331|ref|ZP_02215980.1| thymidine kinase [Bacillus anthracis str. A0488]
gi|167636687|ref|ZP_02394975.1| thymidine kinase [Bacillus anthracis str. A0442]
gi|170688194|ref|ZP_02879405.1| thymidine kinase [Bacillus anthracis str. A0465]
gi|170709372|ref|ZP_02899785.1| thymidine kinase [Bacillus anthracis str. A0389]
gi|177651935|ref|ZP_02934518.1| thymidine kinase [Bacillus anthracis str. A0174]
gi|227818093|ref|YP_002818102.1| thymidine kinase [Bacillus anthracis str. CDC 684]
gi|229094442|ref|ZP_04225514.1| Thymidine kinase [Bacillus cereus Rock3-42]
gi|229158892|ref|ZP_04286949.1| Thymidine kinase [Bacillus cereus ATCC 4342]
gi|229600608|ref|YP_002869545.1| thymidine kinase [Bacillus anthracis str. A0248]
gi|254686247|ref|ZP_05150106.1| thymidine kinase [Bacillus anthracis str. CNEVA-9066]
gi|254724242|ref|ZP_05186026.1| thymidine kinase [Bacillus anthracis str. A1055]
gi|254735258|ref|ZP_05192967.1| thymidine kinase [Bacillus anthracis str. Western North America
USA6153]
gi|254744461|ref|ZP_05202141.1| thymidine kinase [Bacillus anthracis str. Kruger B]
gi|254755799|ref|ZP_05207831.1| thymidine kinase [Bacillus anthracis str. Vollum]
gi|254762139|ref|ZP_05213985.1| thymidine kinase [Bacillus anthracis str. Australia 94]
gi|386739188|ref|YP_006212369.1| thymidine kinase [Bacillus anthracis str. H9401]
gi|421509507|ref|ZP_15956412.1| thymidine kinase [Bacillus anthracis str. UR-1]
gi|421640601|ref|ZP_16081182.1| thymidine kinase [Bacillus anthracis str. BF1]
gi|38372309|sp|Q81JX0.1|KITH_BACAN RecName: Full=Thymidine kinase
gi|254807836|sp|C3P292.1|KITH_BACAA RecName: Full=Thymidine kinase
gi|254807837|sp|C3LFK4.1|KITH_BACAC RecName: Full=Thymidine kinase
gi|30260031|gb|AAP29216.1| thymidine kinase [Bacillus anthracis str. Ames]
gi|47506040|gb|AAT34716.1| thymidine kinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49182092|gb|AAT57468.1| thymidine kinase [Bacillus anthracis str. Sterne]
gi|164712998|gb|EDR18526.1| thymidine kinase [Bacillus anthracis str. A0488]
gi|167527887|gb|EDR90709.1| thymidine kinase [Bacillus anthracis str. A0442]
gi|170125720|gb|EDS94634.1| thymidine kinase [Bacillus anthracis str. A0389]
gi|170667887|gb|EDT18639.1| thymidine kinase [Bacillus anthracis str. A0465]
gi|172082639|gb|EDT67703.1| thymidine kinase [Bacillus anthracis str. A0174]
gi|227006626|gb|ACP16369.1| thymidine kinase [Bacillus anthracis str. CDC 684]
gi|228624503|gb|EEK81273.1| Thymidine kinase [Bacillus cereus ATCC 4342]
gi|228688979|gb|EEL42806.1| Thymidine kinase [Bacillus cereus Rock3-42]
gi|229265016|gb|ACQ46653.1| thymidine kinase [Bacillus anthracis str. A0248]
gi|384389039|gb|AFH86700.1| Thymidine kinase [Bacillus anthracis str. H9401]
gi|401820484|gb|EJT19649.1| thymidine kinase [Bacillus anthracis str. UR-1]
gi|403392280|gb|EJY89535.1| thymidine kinase [Bacillus anthracis str. BF1]
Length = 194
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFKHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|228994050|ref|ZP_04153951.1| Thymidine kinase [Bacillus pseudomycoides DSM 12442]
gi|228765698|gb|EEM14351.1| Thymidine kinase [Bacillus pseudomycoides DSM 12442]
Length = 194
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWVEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKA- 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 --VPVSASKDIF-NHITEEMDVIAIDEVQFFDGDIVEVVQILANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|429727133|ref|ZP_19261912.1| thymidine kinase [Prevotella sp. oral taxon 473 str. F0040]
gi|429144837|gb|EKX87944.1| thymidine kinase [Prevotella sp. oral taxon 473 str. F0040]
Length = 174
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG---VKLPCCALTTLSS 143
MF+GKT L+RRI+ + V + K DTRY +V+HD +P + + S
Sbjct: 1 MFSGKTEELIRRIKRARIAQQQVKIFKPCIDTRYSDVEVVSHDSQSVASVPVASAAEMVS 60
Query: 144 FRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSV 202
DV+G+DEAQFF E L + C A+ GK VIVAGLD D+ FG +
Sbjct: 61 LAHA--------ADVVGVDEAQFFDEGLVEVCNLLANQ-GKRVIVAGLDMDFRGNPFGPM 111
Query: 203 IDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ +A+ VTK+ A C CG+ A F+ R ++G Y P+CRQ Y
Sbjct: 112 PALCAVAEDVTKVHAVCVRCGELAQFSHRLVAGDNQVMLGEMQTYEPLCRQCY 164
>gi|227485080|ref|ZP_03915396.1| possible thymidine kinase [Anaerococcus lactolyticus ATCC 51172]
gi|227236913|gb|EEI86928.1| possible thymidine kinase [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ V G MF+GKTT+L R + T K + D R IV+HD + L
Sbjct: 10 GKLIVHTGSMFSGKTTSLWRELYRMTIANYKTVAFKPSVDNRDSDKKIVSHDNLSLDAIK 69
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF----EDLYD-FCREAADHDGKTVIVAGLDG 192
+ L+ ++D IGIDE QFF ++ D F + A + T++++GLD
Sbjct: 70 IENLNEILDYVKKH---EIDAIGIDELQFFPNEPSEVVDIFNKLMAKN--ITIVISGLDM 124
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY + F + +I+PLAD + K A C CG+ A+ + RK+ + IG D+Y P+CR
Sbjct: 125 DYKAKPFEIIKEIMPLADELIKHHAICASCGEDAWASYRKSSDDSRIQIGSKDVYEPLCR 184
Query: 253 QHY 255
Y
Sbjct: 185 SCY 187
>gi|433624623|ref|YP_007258253.1| Thymidine kinase [Mycoplasma cynos C142]
gi|429534649|emb|CCP24151.1| Thymidine kinase [Mycoplasma cynos C142]
Length = 191
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++ P G + VI GPMF+GKT LL+RI+ N V K DTR+ IV+ G
Sbjct: 2 TLKKPEGTLEVITGPMFSGKTEELLKRIKIFEIAEINTLVFKPAFDTRFDAKKIVSRTGA 61
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLD 191
K ++ + ++ + IDE F ++ ++ +G VIV+GLD
Sbjct: 62 KTKAISINNSKEILDHWT----NKYRAVAIDEVNFLDNGIFEVIDSLIVNGVRVIVSGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
DYLRR FG ++ +AD V KL A C C A F+ RK + +G + Y C
Sbjct: 118 MDYLRRPFGVTPGLLAIADEVKKLKAVCLLCKSDAAFSFRKEANQQLNYLGDQE-YEARC 176
Query: 252 RQHYVSGQ 259
R+ ++ G+
Sbjct: 177 RKCHILGE 184
>gi|65317306|ref|ZP_00390265.1| COG1435: Thymidine kinase [Bacillus anthracis str. A2012]
Length = 194
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K B RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIBNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFKHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|423644493|ref|ZP_17620110.1| thymidine kinase [Bacillus cereus VD166]
gi|401270617|gb|EJR76637.1| thymidine kinase [Bacillus cereus VD166]
Length = 195
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
++ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVSASKDIFEHI----TEELDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G ++ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSVCGSPASRTQRLIDGEPAAFDDPIILVGAAESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|423394475|ref|ZP_17371676.1| thymidine kinase [Bacillus cereus BAG2X1-1]
gi|423405347|ref|ZP_17382496.1| thymidine kinase [Bacillus cereus BAG2X1-3]
gi|401658162|gb|EJS75661.1| thymidine kinase [Bacillus cereus BAG2X1-1]
gi|401661249|gb|EJS78718.1| thymidine kinase [Bacillus cereus BAG2X1-3]
Length = 195
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 103/185 (55%), Gaps = 14/185 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVI-KSNKDTRYGLDSIVTHDGVKLPC 135
+G I VI G MF+GK+ L+RRI+ TQ + A++ K D RY + +V+H+G K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRIR-RTQFAKQYAIVFKPCIDNRYSEEDVVSHNGSKVKA 65
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDY 194
++S+ + F + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 66 ---VSVSASKDIF-NHVTEEMDVIAIDEVQFFDGDIVEVVQILANR-GYRVIVAGLDQDF 120
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYM 248
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y
Sbjct: 121 RGLPFGQVPQLMAIAEHVTKLQAVCSECGSPASRTQRLIDGEPAAFDDPIILVGASESYE 180
Query: 249 PVCRQ 253
P CR
Sbjct: 181 PRCRH 185
>gi|168177468|ref|ZP_02612132.1| thymidine kinase [Clostridium botulinum NCTC 2916]
gi|168182255|ref|ZP_02616919.1| thymidine kinase [Clostridium botulinum Bf]
gi|187777273|ref|ZP_02993746.1| hypothetical protein CLOSPO_00825 [Clostridium sporogenes ATCC
15579]
gi|226947359|ref|YP_002802450.1| thymidine kinase [Clostridium botulinum A2 str. Kyoto]
gi|237793454|ref|YP_002861006.1| thymidine kinase [Clostridium botulinum Ba4 str. 657]
gi|254807842|sp|C1FQ94.1|KITH_CLOBJ RecName: Full=Thymidine kinase
gi|259494451|sp|C3KYH2.1|KITH_CLOB6 RecName: Full=Thymidine kinase
gi|182670652|gb|EDT82626.1| thymidine kinase [Clostridium botulinum NCTC 2916]
gi|182674483|gb|EDT86444.1| thymidine kinase [Clostridium botulinum Bf]
gi|187774201|gb|EDU38003.1| thymidine kinase [Clostridium sporogenes ATCC 15579]
gi|226842763|gb|ACO85429.1| thymidine kinase [Clostridium botulinum A2 str. Kyoto]
gi|229263838|gb|ACQ54871.1| thymidine kinase [Clostridium botulinum Ba4 str. 657]
Length = 191
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPM++GKT L+RRI+ + V V K D RY +V+H G K+
Sbjct: 8 GWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +K D DVIGIDEAQFF+D L + + A+++ + VI AGLD D+
Sbjct: 68 VKSSKEILEKL----LDDTDVIGIDEAQFFDDSLVEIVSKIANNN-RRVICAGLDMDFKG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG + ++ +A+ V K+ A C C A T R + LIG + Y
Sbjct: 123 EPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|418575558|ref|ZP_13139708.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
gi|379325960|gb|EHY93088.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
Length = 183
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GK+ L+RR++ + V V K D RY D IV+H+G + ++T + +
Sbjct: 1 MFSGKSEELIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINISTAAEILK 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
S +VDVIGIDE QFFE+ E G VI AGLD D+ + F + ++
Sbjct: 61 HDLS----EVDVIGIDEVQFFENGIVHIAEQLAEKGHRVITAGLDMDFRAQPFEPMPQLM 116
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPVCRQHYV 256
+++ VTKL A C CG + T R + + L+G ++ Y P CR H++
Sbjct: 117 AVSEDVTKLQAVCAVCGASSSRTQRLIDGNPAKIDDPVILVGANESYEPRCRAHHI 172
>gi|346315167|ref|ZP_08856683.1| thymidine kinase [Erysipelotrichaceae bacterium 2_2_44A]
gi|345905267|gb|EGX75007.1| thymidine kinase [Erysipelotrichaceae bacterium 2_2_44A]
Length = 197
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MFAGKT L+RRI+ + +AV K D RY + +V+H G
Sbjct: 7 EGWLEVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDDRYSEECVVSHCG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+T SF + +D + DVI IDE QFF+ ++ + C ADH GK V+VAGLD
Sbjct: 61 --STAKSFVINRAHEIFDYIDDSYDVIAIDEVQFFDAEIVEICDYFADH-GKRVMVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ F + + A+ VTKLTA C CG A + R + L+G S+
Sbjct: 118 MDFRGEPFSVMPQLFTHAEFVTKLTAVCTICGAPATRSQRLIDGRAARYDDPIILVGASE 177
Query: 246 IYMPVCRQ-HYVSGQVVV 262
Y CR H V G+ ++
Sbjct: 178 QYEARCRHCHEVPGKPLI 195
>gi|15896141|ref|NP_349490.1| thymidine kinase [Clostridium acetobutylicum ATCC 824]
gi|337738095|ref|YP_004637542.1| thymidine kinase [Clostridium acetobutylicum DSM 1731]
gi|384459606|ref|YP_005672026.1| thymidine kinase [Clostridium acetobutylicum EA 2018]
gi|60390149|sp|Q97F65.1|KITH_CLOAB RecName: Full=Thymidine kinase
gi|15025935|gb|AAK80830.1|AE007786_3 Thymidine kinase [Clostridium acetobutylicum ATCC 824]
gi|325510295|gb|ADZ21931.1| thymidine kinase [Clostridium acetobutylicum EA 2018]
gi|336292172|gb|AEI33306.1| thymidine kinase [Clostridium acetobutylicum DSM 1731]
Length = 195
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VIVGPM++GK+ L+RRI+ + + V K D RY + +V+H G K A
Sbjct: 8 GWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVA 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + F D +VI IDE QFF+D + + + A+ G+ VI AGLD D+
Sbjct: 68 IKNSREILKYFEEDT----EVIAIDEVQFFDDEIVEIVNKIAE-SGRRVICAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
+ FG + +++ +A+ V K+ A C CG A T R + LIG + Y
Sbjct: 123 KPFGPIPELMAIAEFVDKIQAICVVCGNPATRTQRLINGKPAFYDDPVVLIGAMESYEAR 182
Query: 251 CRQHYVSGQ 259
CR+ +V Q
Sbjct: 183 CRKCHVVPQ 191
>gi|374324580|ref|YP_005077709.1| thymidine kinase [Paenibacillus terrae HPL-003]
gi|357203589|gb|AET61486.1| thymidine kinase [Paenibacillus terrae HPL-003]
Length = 198
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
P+G I +I GPMF+ K+ L+RR Q Q G R V K +D RY D IV+ G +LP
Sbjct: 2 PTGRITIITGPMFSEKSGELIRRCQKLIQYGHRKVVAYKPAEDNRYAKDEIVSRIGYRLP 61
Query: 135 CCAL--TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
++ Q+ + D DV+ DE QFF E + GK VI GL+
Sbjct: 62 AISIPKKLTDELVQQILEETKD-ADVVAFDEVQFFSRHIMTLVEELAYCGKHVIADGLNL 120
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTE-----LIGGSDI 246
DY + FG V ++ +AD + KL + C CG A +T R + +IG S+
Sbjct: 121 DYRGKEFGYVGGLLAMADDIEKLASFCAVCGSSEAVYTQRMVNGKPSTVGPIVMIGDSEA 180
Query: 247 YMPVCRQHYV 256
Y P CR ++
Sbjct: 181 YEPRCRDCFI 190
>gi|148378142|ref|YP_001252683.1| thymidine kinase [Clostridium botulinum A str. ATCC 3502]
gi|153931851|ref|YP_001382543.1| thymidine kinase [Clostridium botulinum A str. ATCC 19397]
gi|153936545|ref|YP_001386095.1| thymidine kinase [Clostridium botulinum A str. Hall]
gi|153940504|ref|YP_001389499.1| thymidine kinase [Clostridium botulinum F str. Langeland]
gi|170755962|ref|YP_001779763.1| thymidine kinase [Clostridium botulinum B1 str. Okra]
gi|384460583|ref|YP_005673178.1| thymidine kinase [Clostridium botulinum F str. 230613]
gi|387816365|ref|YP_005676709.1| thymidine kinase [Clostridium botulinum H04402 065]
gi|429247089|ref|ZP_19210365.1| thymidine kinase [Clostridium botulinum CFSAN001628]
gi|166220762|sp|A7FQF9.1|KITH_CLOB1 RecName: Full=Thymidine kinase
gi|166220763|sp|A5HY32.1|KITH_CLOBH RecName: Full=Thymidine kinase
gi|166220764|sp|A7G9N9.1|KITH_CLOBL RecName: Full=Thymidine kinase
gi|229486314|sp|B1IE18.1|KITH_CLOBK RecName: Full=Thymidine kinase
gi|148287626|emb|CAL81691.1| thymidine kinase [Clostridium botulinum A str. ATCC 3502]
gi|152927895|gb|ABS33395.1| thymidine kinase [Clostridium botulinum A str. ATCC 19397]
gi|152932459|gb|ABS37958.1| thymidine kinase [Clostridium botulinum A str. Hall]
gi|152936400|gb|ABS41898.1| thymidine kinase [Clostridium botulinum F str. Langeland]
gi|169121174|gb|ACA45010.1| thymidine kinase [Clostridium botulinum B1 str. Okra]
gi|295317600|gb|ADF97977.1| thymidine kinase [Clostridium botulinum F str. 230613]
gi|322804406|emb|CBZ01956.1| thymidine kinase [Clostridium botulinum H04402 065]
gi|428755942|gb|EKX78537.1| thymidine kinase [Clostridium botulinum CFSAN001628]
Length = 191
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPM++GKT L+RRI+ + V V K D RY +V+H G K+
Sbjct: 8 GWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ + +K D DVIGIDEAQFF+D ++ + VI AGLD D+
Sbjct: 68 VKSSKEILEKL----LDDTDVIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDFKGE 123
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVC 251
FG + ++ +A+ V K+ A C C A T R + LIG + Y C
Sbjct: 124 PFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYEARC 183
Query: 252 RQ 253
R+
Sbjct: 184 RK 185
>gi|170761483|ref|YP_001785465.1| thymidine kinase [Clostridium botulinum A3 str. Loch Maree]
gi|238688739|sp|B1KSQ8.1|KITH_CLOBM RecName: Full=Thymidine kinase
gi|169408472|gb|ACA56883.1| thymidine kinase [Clostridium botulinum A3 str. Loch Maree]
Length = 191
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPM++GKT L+RRI+ + V V K D RY +V+H G K+
Sbjct: 8 GWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +K D DVIGIDEAQFF+D L + + A+++ + VI AGLD D+
Sbjct: 68 VRSSKEILEKL----LDDTDVIGIDEAQFFDDSLVEIVSKIANNN-RRVICAGLDMDFKG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG + ++ +A+ V K+ A C C A T R + LIG + Y
Sbjct: 123 EPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|172058727|ref|YP_001815187.1| thymidine kinase [Exiguobacterium sibiricum 255-15]
gi|171991248|gb|ACB62170.1| Thymidine kinase [Exiguobacterium sibiricum 255-15]
Length = 206
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 94/189 (49%), Gaps = 11/189 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GK+ L+RR++ V V K D RY + +V+H G +
Sbjct: 9 GWIEVICGSMFSGKSEELIRRVRRAQYGKLPVQVFKPAIDDRYHEEHVVSHVGNSVIAIP 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ T R + + A ++ ++ IDE QFF+D EA DGK VI AGLD D+
Sbjct: 69 MAT---SRDVYAAVA-EETQIVAIDEVQFFDDEIVAVIEALAQDGKRVICAGLDQDFRAE 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPVC 251
FG + +++ A+ VTKL A C CG A T R + L+G S+ Y P C
Sbjct: 125 PFGKMPELLARAEFVTKLQAICLSCGDPASRTQRLIDGKPANYNDPIILVGASESYEPRC 184
Query: 252 RQ-HYVSGQ 259
R H V G+
Sbjct: 185 RHCHQVPGK 193
>gi|228988556|ref|ZP_04148643.1| Thymidine kinase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228771173|gb|EEM19652.1| Thymidine kinase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 194
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GK+ L+RR++ ++ V K D RY + +V+H+G+K+
Sbjct: 7 NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + +++DVI IDE QFF+ D+ + + A+ G VIVAGLD D+
Sbjct: 67 PVPASKDIFEHI----TEEMDVIAIDEVQFFDGDIVEVVQVLANR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V ++ +A+ VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 122 GLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|421836833|ref|ZP_16271192.1| thymidine kinase [Clostridium botulinum CFSAN001627]
gi|409741183|gb|EKN41119.1| thymidine kinase [Clostridium botulinum CFSAN001627]
Length = 191
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPM++GKT L+RRI+ + V V K D RY +V+H G K+
Sbjct: 8 GWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ + +K D DVIGIDEAQFF+D ++ + VI AGLD D+
Sbjct: 68 VKSSKEILEKL----LDDTDVIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDFKGE 123
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVC 251
FG + ++ +A+ V K+ A C C A T R + LIG + Y C
Sbjct: 124 PFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKPAKKSDPVVLIGAQESYEARC 183
Query: 252 RQ 253
R+
Sbjct: 184 RK 185
>gi|297624294|ref|YP_003705728.1| thymidine kinase [Truepera radiovictrix DSM 17093]
gi|297165474|gb|ADI15185.1| Thymidine kinase [Truepera radiovictrix DSM 17093]
Length = 204
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + +IVGPMF+GK+ L+RR+ + V V K D RY ++ +H+G L
Sbjct: 8 GGFLELIVGPMFSGKSEELIRRVTRAFIAKQRVQVFKPALDGRYHAQAVASHNGRTLEAL 67
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
A++ + R + V V+ IDE QF L F + A+ GK V++AGLD D+
Sbjct: 68 AVSDVEEMRAALS----EAVQVVAIDEGQFLSAALVGFACDLAE-SGKRVMIAGLDLDFR 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG + +++ A+SVTKLTA C CG A T R + L+G ++ Y P
Sbjct: 123 AEPFGPMPELLSRAESVTKLTAVCVRCGAPATRTQRLIGGHPAHYDDPVILVGAAEAYEP 182
Query: 250 VCR 252
CR
Sbjct: 183 RCR 185
>gi|288554411|ref|YP_003426346.1| thymidine kinase [Bacillus pseudofirmus OF4]
gi|288545571|gb|ADC49454.1| thymidine kinase [Bacillus pseudofirmus OF4]
Length = 206
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V+ G + VI G MF+GK+ L+RR++ + V V K D RY + +V+H+G K
Sbjct: 3 VTGHEGRLEVICGSMFSGKSEELIRRVRRVSFGKLKVQVFKPAIDNRYSEEEVVSHNGTK 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ CA+ S + V+ +DE QFF++ + + G VI AGLD
Sbjct: 63 V--CAMPVRMSV--DILEHVLPETQVVAVDEVQFFDEGIVAVADELANRGIRVICAGLDQ 118
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDI 246
D+ FG ++ ++ LA+ VTKL A C CG A T R + L+G S+
Sbjct: 119 DFRGEPFGPIMPLMALAEEVTKLQAVCPVCGTPASRTQRLIDGNPASYTDPIILVGASEA 178
Query: 247 YMPVCR 252
Y P CR
Sbjct: 179 YEPRCR 184
>gi|425733747|ref|ZP_18852067.1| thymidine kinase [Brevibacterium casei S18]
gi|425482187|gb|EKU49344.1| thymidine kinase [Brevibacterium casei S18]
Length = 198
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI GPMF+GK+ L+RR++ G VI + DTR L ++ +H GV +P
Sbjct: 9 GRLEVITGPMFSGKSEELMRRVRRARIAGVEALVISHSLDTRAELSAVTSHIGVTVPAVP 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL----DGD 193
+ ++S + + + VD++ IDEAQFF E G VIV GL DGD
Sbjct: 69 VGDVASLAEAARA---EDVDLVAIDEAQFFGPDLVPAVEKLLSRGIDVIVEGLCVTFDGD 125
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR-------KTEETKTELIGGSDI 246
F + + LA+ VTKLTA C CG+ A F R + IGG D
Sbjct: 126 ----PFEPLPTFMALAEDVTKLTAVCTVCGRDAVFHERIAAAPAGSATDIDASHIGGLDS 181
Query: 247 YMPVCRQHYVSG 258
Y+ CR+H+ G
Sbjct: 182 YVARCREHFGHG 193
>gi|418323325|ref|ZP_12934606.1| thymidine kinase [Staphylococcus pettenkoferi VCU012]
gi|365229972|gb|EHM71096.1| thymidine kinase [Staphylococcus pettenkoferi VCU012]
Length = 201
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY D IV+H+G +
Sbjct: 7 SGWIECITGSMFSGKSEELIRRLRRGLYAKQKVIVFKPAIDDRYYKDKIVSHNGNAIEAF 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+TT + + SD VDVIGIDE QFF+ ++ + AD G V+ AGLD D+
Sbjct: 67 NITTAAEILKYDLSD----VDVIGIDEVQFFDAEIVHIAEQLADQ-GHRVVTAGLDMDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
+ F + ++ +++ + KL A C CG + T R + + L+G ++ Y P
Sbjct: 122 GQPFEPMPAMLAVSEIIIKLQAVCAVCGSSSSRTQRLIDGKPAKVDDPVILVGANESYEP 181
Query: 250 VCRQHYV 256
CR H++
Sbjct: 182 RCRAHHI 188
>gi|325954627|ref|YP_004238287.1| thymidine kinase [Weeksella virosa DSM 16922]
gi|323437245|gb|ADX67709.1| Thymidine kinase [Weeksella virosa DSM 16922]
Length = 198
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQ-AETQKGRNVAVIKSNKDTRYGLDSI 125
L + + + SG I VI G MF+GKT L+RR++ AE K R V + K D RY +
Sbjct: 3 LENTINPNQKSGWIEVICGSMFSGKTEELIRRLRRAEFAKQR-VEIFKPAVDVRYDDTEV 61
Query: 126 VTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKT 184
V+H+ + + SS + DV+GIDEAQFF+D + D + A+ GK
Sbjct: 62 VSHNQNSIDSTPVDFSSSILL-----LANDCDVVGIDEAQFFDDGIVDVANQLANQ-GKR 115
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI+AGLD D+ R FG + +++ A+ VTK+ A C G A ++ RK K +G +
Sbjct: 116 VIIAGLDMDFKGRPFGPMPNLMATAEYVTKVHAICVKTGNLANYSHRKIASDKLVELGET 175
Query: 245 DIYMPVCRQHY 255
Y P+ R +
Sbjct: 176 SEYEPLSRSAF 186
>gi|260889955|ref|ZP_05901218.1| thymidine kinase [Leptotrichia hofstadii F0254]
gi|260860561|gb|EEX75061.1| thymidine kinase [Leptotrichia hofstadii F0254]
Length = 359
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 10/190 (5%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S G + V+ G MF+GK+ L+RR++ + + K D RYG + + +H
Sbjct: 4 NSKIGTLEVVTGSMFSGKSEELIRRLRRAEYAKQKIVAFKHAIDNRYGEEGVFSHGNDSF 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
++ +S + + +VIGIDE QFF E + +FC++ ++ GK VIVAGLD
Sbjct: 64 RAYPVSDVSQMEEIMEKNV--DAEVIGIDEVQFFGEKVVEFCKKYVEY-GKRVIVAGLDM 120
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDI 246
+ + V +++ +AD V KL A C CGK A+ + R + ++G ++
Sbjct: 121 SFRAEPYEPVPELMSIADQVDKLHAICMVCGKPAYASQRLINGEPAYYDDPLVMVGANEN 180
Query: 247 YMPVCRQHYV 256
Y CR+H++
Sbjct: 181 YEARCRRHHI 190
>gi|225012398|ref|ZP_03702834.1| Thymidine kinase [Flavobacteria bacterium MS024-2A]
gi|225003375|gb|EEG41349.1| Thymidine kinase [Flavobacteria bacterium MS024-2A]
Length = 196
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + + + K D RY + + +HD ++P
Sbjct: 14 GWIEVICGSMFSGKTEELIRRLKRAQFAKQKIEIFKPAIDLRYDDELVTSHDQNQIPSTP 73
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ D DV+GIDEAQFF+D + C + A+ +G VIVAGLD D+
Sbjct: 74 VPAAANI-----PILADGCDVVGIDEAQFFDDEIVKVCNDLAN-NGVRVIVAGLDMDFQG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ A+ VTK+ A C G A + R +E L+G + Y P+ R +
Sbjct: 128 NPFGPMPALMATAEYVTKVHAICTRTGGLANHSFRTSENNSIVLLGEKESYEPLSRAAFF 187
Query: 257 SGQ 259
+
Sbjct: 188 NAN 190
>gi|108763197|ref|YP_633226.1| thymidine kinase [Myxococcus xanthus DK 1622]
gi|108467077|gb|ABF92262.1| thymidine kinase [Myxococcus xanthus DK 1622]
Length = 199
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR+Q + V V K D RY ++V+H K+ A
Sbjct: 9 GWIEVICGSMFSGKTEELIRRVQRAVYGKQKVQVFKPRIDNRYDESAVVSHSQHKVLSTA 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ + D V+GIDE QFF EA + G VI AGLD DY R
Sbjct: 69 IERAEEIFYRLAPDT----QVVGIDEVQFFGSEVVAVVEALANKGLRVICAGLDQDYQGR 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
F + ++ +++ VTK A C CG A + R + ++G + Y P CR+ +V+
Sbjct: 125 PFEPMPQLMAVSEYVTKELAICVVCGNPANRSQRIVSSGERVVVGAAGAYEPRCRKCHVA 184
>gi|317130776|ref|YP_004097058.1| thymidine kinase [Bacillus cellulosilyticus DSM 2522]
gi|315475724|gb|ADU32327.1| Thymidine kinase [Bacillus cellulosilyticus DSM 2522]
Length = 207
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 13/191 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + V+ G MF+GK+ L+RR++ + V V K D RY +V+H+G K+
Sbjct: 8 EGWLEVVCGSMFSGKSEELIRRVRRAYYGRQKVQVFKPEIDNRYSEKEVVSHNGTKVYAL 67
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + D V+ IDE QFF+ + + +E AD +G VIVAGLD D+
Sbjct: 68 PVKGAAMILELLEKDT----QVVAIDEVQFFDLGVVEVVQELAD-EGIRVIVAGLDQDFR 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG + ++ LA++VTKL A C CG A T R + + L+G S+ Y P
Sbjct: 123 GEPFGCMPSLLALAETVTKLQAICLSCGSPASRTQRLINGEPASYDDPIILVGASESYEP 182
Query: 250 VCRQ-HYVSGQ 259
CR H V G
Sbjct: 183 RCRHCHEVPGH 193
>gi|385800857|ref|YP_005837261.1| thymidine kinase [Halanaerobium praevalens DSM 2228]
gi|309390221|gb|ADO78101.1| Thymidine kinase [Halanaerobium praevalens DSM 2228]
Length = 192
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I GPM+ GK+ L+RR+ + V V K D RY +V+H G +
Sbjct: 7 SGWLEIITGPMYCGKSEELIRRLNRVKIAKQKVRVFKPVLDDRYSKKDVVSHSGNSIEAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ ++ VDV+GIDEAQFF DL C E AD +G VI+AGLD D+
Sbjct: 67 PVDHPEEILKRIDK----TVDVVGIDEAQFFHSDLVAICEELAD-EGIRVILAGLDRDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
+ FG + +++ A+ V KL A C CG+ A T R + L+G +++Y
Sbjct: 122 NQPFGPMPELMARAEYVDKLHAICIQCGEPASRTQRLINGQPARADDPVILVGAAEVYEA 181
Query: 250 VCR 252
CR
Sbjct: 182 RCR 184
>gi|257126153|ref|YP_003164267.1| thymidine kinase [Leptotrichia buccalis C-1013-b]
gi|257050092|gb|ACV39276.1| Thymidine kinase [Leptotrichia buccalis C-1013-b]
Length = 359
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+S G + V+ G MF+GK+ L+RR++ + + K D RYG + +H
Sbjct: 4 NSKIGTLEVVTGSMFSGKSEELIRRLRRAEYAKQKIVAFKHAIDNRYGENGAFSHGNNSF 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
++ +S + + +VIGIDE QFF E + DFC++ ++ GK +IVAGLD
Sbjct: 64 RAYPVSDVSQMEEIMAKNI--DAEVIGIDEIQFFGEKVVDFCKKYVEY-GKRIIVAGLDM 120
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDI 246
+ + V +++ +AD V KL A C CGK A+ + R + ++G ++
Sbjct: 121 SFRAEPYEPVPELMSIADQVDKLHAICTVCGKPAYASQRLINGEPAYYDDPLVMVGANEN 180
Query: 247 YMPVCRQHYV 256
Y CR+H++
Sbjct: 181 YEARCRRHHI 190
>gi|241889981|ref|ZP_04777279.1| thymidine kinase [Gemella haemolysans ATCC 10379]
gi|241863603|gb|EER67987.1| thymidine kinase [Gemella haemolysans ATCC 10379]
Length = 192
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I I G MF+GK+ LLRRI+ +NV + K + D RY + + TH+G
Sbjct: 8 GWIECICGSMFSGKSEELLRRIKRGVIAKQNVLLFKPSIDNRYEENKVSTHNGNSYESVN 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ YD +IGIDE QFF+D + + + AD DG VIVAGLD D+
Sbjct: 68 IDKAEQIYDYINDKKYD---IIGIDEVQFFDDKIVEVINKLAD-DGVRVIVAGLDMDFKA 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + +I+ +++ VTKL A C CGK A + R E K + +IG S+ Y
Sbjct: 124 EPFHPMPEIMAISEMVTKLHAVCNKCGKEASRSQRLINGEPAKYDDPIVVIGASESYEAR 183
Query: 251 CRQ 253
CR
Sbjct: 184 CRH 186
>gi|227499424|ref|ZP_03929535.1| possible thymidine kinase [Anaerococcus tetradius ATCC 35098]
gi|227218486|gb|EEI83729.1| possible thymidine kinase [Anaerococcus tetradius ATCC 35098]
Length = 207
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + V G MF+GKTT+L R + + K + D R IV+HD ++L
Sbjct: 10 GRLIVHTGSMFSGKTTSLWRELYRMRIANYKIVAFKPSIDNRDDDKKIVSHDNLELDAIK 69
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF----EDLYDFCREAADHDGKTVIVAGLDGD 193
+ + ++ + +D IGIDE QFF ++ + E + T++V+GLD D
Sbjct: 70 VENI---KEILAYAKSNDIDCIGIDEVQFFPNDPSEIIEIFNELMAMNI-TIVVSGLDMD 125
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
Y+ R F + +I+P+AD + K A C CG+ A+ + +K+ + IG D+Y P+CR
Sbjct: 126 YMARPFEIIKEIMPIADELVKHHAICASCGEDAWASYKKSSDDSRIQIGSKDLYEPLCRS 185
Query: 254 HY 255
Y
Sbjct: 186 CY 187
>gi|325284899|ref|YP_004264361.1| Thymidine kinase [Deinococcus proteolyticus MRP]
gi|324316614|gb|ADY27726.1| Thymidine kinase [Deinococcus proteolyticus MRP]
Length = 208
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VIVGPMF+GK+ L+RR+ + VAV K D RY + ++ +H G L
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRLTRAVIARQQVAVFKPALDDRYHVAAVASHAGRSLDAV 67
Query: 137 ALTTLSSFRQKF-----------GSDAYD-QVDVIGIDEAQFF-EDLYDFCREAADHDGK 183
+ ++ R G D DV+GIDEAQFF DL E A +G
Sbjct: 68 PVPDAAAIRAALNGEGPLLAAHAGPDTPPVWPDVVGIDEAQFFGADLIPLVLELAG-EGV 126
Query: 184 TVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE---- 239
V++AGLD D+ FG + +++ A+SV KLTA C CG A + R
Sbjct: 127 RVVLAGLDLDFRAEPFGVMPELLARAESVEKLTAICTVCGAPATRSQRLIGGRPARFGDP 186
Query: 240 --LIGGSDIYMPVCRQHYVSGQ 259
L+G + Y CR H+ G
Sbjct: 187 VVLVGAQESYEARCRLHHELGH 208
>gi|13507783|ref|NP_109732.1| thymidine kinase [Mycoplasma pneumoniae M129]
gi|2497575|sp|P75070.1|KITH_MYCPN RecName: Full=Thymidine kinase
gi|1673767|gb|AAB95758.1| thymidine kinase [Mycoplasma pneumoniae M129]
Length = 191
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 9/187 (4%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTR--YGLDSIVTHDGVK 132
SP G I VI GPMF+GKT LLR+I+ V + K DTR + + S H
Sbjct: 10 SPRGWIEVICGPMFSGKTEELLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDEA 69
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ + + + K D+ DV+ IDEAQFF ++ + G VIV+GLD
Sbjct: 70 IEINSPLEIYDYLTK------DRFDVVAIDEAQFFSSEIVEVVKSLNDLGINVIVSGLDT 123
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR-KTEETKTELIGGSDIYMPVC 251
D+ FGS+ ++ +AD + KL A C CG+ A T R ++ +T LIG + Y P C
Sbjct: 124 DFRAEPFGSIPQLLAIADKICKLDAVCNVCGQLAQRTQRIVSKSNETVLIGDIEAYEPRC 183
Query: 252 RQHYVSG 258
+ H S
Sbjct: 184 KLHQPSA 190
>gi|291295737|ref|YP_003507135.1| thymidine kinase [Meiothermus ruber DSM 1279]
gi|290470696|gb|ADD28115.1| Thymidine kinase [Meiothermus ruber DSM 1279]
Length = 200
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I V+VGPMF+GK+ L+RR++ + V V K D RY + +HDG +
Sbjct: 8 QGWIEVVVGPMFSGKSDELIRRVKRALIARQRVLVFKPRLDDRYHASDVFSHDGRRAEAI 67
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
A+ + R SD DV+ +DEAQFF+ L E AD G VI AGLD D+
Sbjct: 68 AVRDAAELRAHL-SDPLP--DVVAVDEAQFFDAGLVALVLELADR-GVRVICAGLDMDFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG + ++ A+ V KL A C CG A T R + L+G S+ Y P
Sbjct: 124 GEPFGIMPQLLARAEYVEKLFAVCPVCGAPATRTQRFVNGKPARYDDPVILVGASEAYEP 183
Query: 250 VCRQ 253
CR+
Sbjct: 184 RCRK 187
>gi|42524779|ref|NP_970159.1| thymidine kinase [Bdellovibrio bacteriovorus HD100]
gi|60390024|sp|Q6MHW4.1|KITH_BDEBA RecName: Full=Thymidine kinase
gi|39576989|emb|CAE78218.1| Thymidine kinase [Bdellovibrio bacteriovorus HD100]
Length = 204
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 69 SEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTH 128
SE S G + V+VG MF+GKT L+RR++ + V K D RY ++ +H
Sbjct: 2 SEFSYVHTRGWVEVVVGSMFSGKTEELIRRLRRAEFARLQIQVFKPIIDKRYNEMAVTSH 61
Query: 129 DGVKLPCCALTTLSSFRQKFGSDAYD----QVDVIGIDEAQFF-EDLYDFCREAADHDGK 183
D LTT+ S + ++ V+GIDE QFF ++L ++ AD G
Sbjct: 62 D--------LTTIDSTPIHDAEEIWNLLKPNTKVVGIDEGQFFGQNLVQIAQDLADR-GL 112
Query: 184 TVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGG 243
VI+AGLD D+ + F + ++ +A+SVTK A C CG A T R L+G
Sbjct: 113 RVIIAGLDTDWQGKPFEPMPTLMAVAESVTKQHAVCVVCGAPASRTQRTAGGDGQVLVGT 172
Query: 244 SDIYMPVCRQHY 255
D Y CRQH+
Sbjct: 173 HDAYEARCRQHF 184
>gi|409099623|ref|ZP_11219647.1| thymidine kinase [Pedobacter agri PB92]
Length = 172
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
Query: 89 AGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKF 148
+GKT L+RR++ NV + K DTRY ++V+HD + + + S+
Sbjct: 6 SGKTEELIRRLKRAQIAKLNVEIFKPRTDTRYHESAVVSHDLNSINSTPVDSASAILL-L 64
Query: 149 GSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIP 207
G++ V+GIDEAQFF++ L + C + A G VIVAGLD D+ + FG + ++
Sbjct: 65 GTNT----QVVGIDEAQFFDNELPEVCNKLA-MKGIRVIVAGLDMDFTGKPFGPMPALMA 119
Query: 208 LADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSGQ 259
+A+ VTK+ A C CG A ++ R + T L+G + Y P CR Y G+
Sbjct: 120 IAEHVTKVNAVCVCCGNPALYSYRTVADENTVLLGEKESYEPRCRACYNIGK 171
>gi|220932635|ref|YP_002509543.1| thymidine kinase [Halothermothrix orenii H 168]
gi|219993945|gb|ACL70548.1| Thymidine kinase [Halothermothrix orenii H 168]
Length = 198
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI GPM+ GK+ L+RR++ + V K D RY +V+H+G ++
Sbjct: 7 TGWIEVITGPMYCGKSEELIRRLRRVEIARQKAHVFKPVIDNRYSNKDVVSHNGERIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ Q+ + +V+GIDE QFF + + C + AD +GK VIVAGLD D+
Sbjct: 67 PVNHPEEILQRIDKNT----EVVGIDEVQFFSNGIISICEQLAD-EGKRVIVAGLDRDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG V +++ A+ V KL A C CG+ A T R + + ++G ++Y
Sbjct: 122 GEPFGPVPELLARAEYVDKLHAICVKCGELASRTQRLIDGEPASYDDPVIMVGAEEVYEA 181
Query: 250 VCRQ 253
CR+
Sbjct: 182 RCRK 185
>gi|19699027|gb|AAL91131.1| thymidine kinase [Mycoplasma gallisepticum]
Length = 224
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 21/201 (10%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
+ + ++++ +G I I GPMFAGKT L+R+I+ V DTR + I
Sbjct: 1 MAKKNAMTTSNGWIEAICGPMFAGKTDELIRKIKRYEYADVKSLVFSPATDTRSAQEIIN 60
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQV-----DVIGIDEAQFFED-LYDFCREAADH 180
+ DG ++ S + K + YD V ++GIDE QFF+D + + + AD+
Sbjct: 61 SRDGRRI--------GSIKIKKAFEIYDYVLLHKPQLVGIDEVQFFDDSIVEVIQTLADN 112
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET---- 236
VIVAGLD D+ FG + I+ +A+SV +LTA C CG A + R +
Sbjct: 113 Q-INVIVAGLDRDFRGEPFGPIPKILGIAESVIRLTAICSECGAEASRSQRLIDNQPADY 171
Query: 237 --KTELIGGSDIYMPVCRQHY 255
+T LIG ++ Y P CR H+
Sbjct: 172 NCETILIGDTESYAPRCRHHH 192
>gi|294660593|ref|NP_853445.2| thymidine kinase [Mycoplasma gallisepticum str. R(low)]
gi|385325787|ref|YP_005880225.1| thymidine kinase [Mycoplasma gallisepticum str. R(high)]
gi|385326542|ref|YP_005880979.1| thymidine kinase [Mycoplasma gallisepticum str. F]
gi|401766554|ref|YP_006581560.1| thymidine kinase [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|401767308|ref|YP_006582313.1| thymidine kinase [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|401768080|ref|YP_006583084.1| thymidine kinase [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|401768841|ref|YP_006583844.1| thymidine kinase [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|401769588|ref|YP_006584590.1| thymidine kinase [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|401770341|ref|YP_006585342.1| thymidine kinase [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|401771097|ref|YP_006586097.1| thymidine kinase [Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|401771845|ref|YP_006586844.1| thymidine kinase [Mycoplasma gallisepticum NC08_2008.031-4-3P]
gi|33860174|sp|Q8RLE0.2|KITH_MYCGA RecName: Full=Thymidine kinase
gi|284812256|gb|AAP57013.2| Thymidine kinase [Mycoplasma gallisepticum str. R(low)]
gi|284930943|gb|ADC30882.1| Thymidine kinase [Mycoplasma gallisepticum str. R(high)]
gi|284931698|gb|ADC31636.1| Thymidine kinase [Mycoplasma gallisepticum str. F]
gi|400272762|gb|AFP76225.1| Thymidine kinase [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|400273530|gb|AFP76992.1| Thymidine kinase [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|400274289|gb|AFP77750.1| Thymidine kinase [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|400275057|gb|AFP78517.1| Thymidine kinase [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|400275818|gb|AFP79277.1| Thymidine kinase [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|400276565|gb|AFP80023.1| Thymidine kinase [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|400277310|gb|AFP80767.1| Thymidine kinase [Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|400278074|gb|AFP81530.1| Thymidine kinase [Mycoplasma gallisepticum NC08_2008.031-4-3P]
Length = 224
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 21/201 (10%)
Query: 67 LHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIV 126
+ + ++++ +G I I GPMFAGKT L+R+I+ V DTR + I
Sbjct: 1 MAKKNAMTTTNGWIEAICGPMFAGKTDELIRKIKRYEYADVKSLVFSPATDTRSAQEIIN 60
Query: 127 THDGVKLPCCALTTLSSFRQKFGSDAYDQV-----DVIGIDEAQFFED-LYDFCREAADH 180
+ DG ++ S + K + YD V ++GIDE QFF+D + + + AD+
Sbjct: 61 SRDGRRI--------GSIKIKKAFEIYDYVLLHKPQLVGIDEVQFFDDSIVEVIQTLADN 112
Query: 181 DGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET---- 236
VIVAGLD D+ FG + I+ +A+SV +LTA C CG A + R +
Sbjct: 113 Q-INVIVAGLDRDFRGEPFGPIPKILGIAESVIRLTAICSECGAEASRSQRLIDNQPADY 171
Query: 237 --KTELIGGSDIYMPVCRQHY 255
+T LIG ++ Y P CR H+
Sbjct: 172 NCETILIGDTESYAPRCRHHH 192
>gi|448296725|ref|ZP_21486778.1| thymidine kinase [Halalkalicoccus jeotgali B3]
gi|445580857|gb|ELY35227.1| thymidine kinase [Halalkalicoccus jeotgali B3]
Length = 195
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 10/191 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MFAGKT LLRR++ G+ VAV K D RYG ++ TH+G +
Sbjct: 7 SGWVEVIAGCMFAGKTEELLRRLRRAEIAGQEVAVFKPATDDRYGKATVGTHNGRQWDAD 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ T + + D + V+ IDEA FF L D C E A +DG+ VIV+G D +
Sbjct: 67 VIGTDAEAVRAI-PDRLNGEQVVAIDEANFFSPALVDVCEELA-NDGRRVIVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ +A+ V K A C CG+ A R + E T ++G + Y
Sbjct: 125 GEPFEPLPQLLAIAEYVEKFQAICSVCGEPASRNQRLVDGEPARREDPTVMVGAEESYEA 184
Query: 250 VCRQ-HYVSGQ 259
CR H + G+
Sbjct: 185 RCRNCHVLRGE 195
>gi|148377963|ref|YP_001256839.1| thymidine kinase [Mycoplasma agalactiae PG2]
gi|148292009|emb|CAL59401.1| Thymidine kinase [Mycoplasma agalactiae PG2]
Length = 190
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ VI GPMF+GKT LL+RI G N VIK DTR+ + IV+ G K
Sbjct: 8 GQLEVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSENEIVSRTGAKHKAIN 67
Query: 138 LTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
+++ L + K+ A D+V+ + D E+L + G VI +GLD D
Sbjct: 68 VSSSKEILDHWSTKYMCVAIDEVNFMDEDILSVIEELI--------YKGVKVICSGLDMD 119
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ RR F + ++ ADS+ KL A C C A F+ RK + + L+G S+ Y CR
Sbjct: 120 FKRRPFDVMAKVLASADSILKLKAVCLECKSDAGFSFRKVKSDELNLLGDSE-YEARCRI 178
Query: 254 HYVSGQ 259
++ G+
Sbjct: 179 CHIKGE 184
>gi|371945144|gb|AEX62965.1| thymidine kinase [Moumouvirus Monve]
Length = 206
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 8/180 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-GLDS----IVTHDGVKLP 134
I I+GPMF+GKTT +R I+ + G+ +IK +D R+ ++S ++TH+ +K
Sbjct: 3 ITTIIGPMFSGKTTEFIRLIERKKLAGKQCLIIKHLQDNRFEEINSKEKHVITHNKIKYK 62
Query: 135 CCALTTLSSF-RQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
C + + +F DV+GI+E FF +L FC A+ + + VIV+ +D
Sbjct: 63 NCDIVYNTDLMNNEFLEYVKTSYDVVGIEEGFFFNNLTTFCNCLANENIE-VIVSTIDSS 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFC-GKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y + + +I +++V KL A C C A FT+R ++ + L+GGSDIY VCR
Sbjct: 122 YKQEIPQEIGKLIATSENVIKLKAVCMECKNTDASFTIRTIDDEQDILVGGSDIYQSVCR 181
>gi|419808489|ref|ZP_14333393.1| Thymidine kinase [Mycoplasma agalactiae 14628]
gi|390605892|gb|EIN15265.1| Thymidine kinase [Mycoplasma agalactiae 14628]
Length = 190
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ VI GPMF+GKT LL+RI G N VIK DTR+ + IV+ G K
Sbjct: 8 GQLEVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSENEIVSRTGAKHKAIN 67
Query: 138 LTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
+++ L + K+ A D+V+ + D E+L + G VI +GLD D
Sbjct: 68 VSSSKEILDHWSPKYMCVAIDEVNFMDEDILSVIEELI--------YKGVRVICSGLDMD 119
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ RR F + ++ ADS+ KL A C C A F+ RK + + L+G S+ Y CR
Sbjct: 120 FKRRPFDVMAKVLASADSILKLKAVCLECKSDAGFSFRKVKSDELNLLGDSE-YEARCRI 178
Query: 254 HYVSGQ 259
++ G+
Sbjct: 179 CHIKGE 184
>gi|299144519|ref|ZP_07037598.1| thymidine kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517607|gb|EFI41347.1| thymidine kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 194
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + V G MF+GKT++L R ++ G K + DTR + IVTHD L
Sbjct: 6 GRLIVHTGSMFSGKTSSLEREMKRFAIAGYKTVAFKPSIDTRADREKIVTHDNTYLSAVM 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAAD--HDGKTVIVAGLDGDY 194
+ + + ++ V+GIDE QF ++ + +E + + GKTV+VAGLD DY
Sbjct: 66 VNNIFELVKYVSKSDFE---VVGIDEVQFLGGEVEEILKEINELLNSGKTVVVAGLDMDY 122
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F V +++ +D + K A C CG A+ + RKT+ + +IG ++ Y P+CR
Sbjct: 123 TSKPFEIVKELMSRSDYLNKHHAVCTVCGADAWVSHRKTKSDERIVIGATEEYEPLCRNC 182
Query: 255 Y 255
Y
Sbjct: 183 Y 183
>gi|206895840|ref|YP_002247172.1| thymidine kinase [Coprothermobacter proteolyticus DSM 5265]
gi|238056553|sp|B5Y8S5.1|KITH_COPPD RecName: Full=Thymidine kinase
gi|206738457|gb|ACI17535.1| thymidine kinase [Coprothermobacter proteolyticus DSM 5265]
Length = 198
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
+ + G + VI G MF+GKT L+RR++ + IK DTRY L ++V+H G
Sbjct: 2 EIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGF 61
Query: 132 KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGL 190
+ S DA +V+GIDEAQFF +L RE + K VIVAGL
Sbjct: 62 SFNAIPVEDPKSI-LGMAKDA----EVVGIDEAQFFTGELVPVIRELL-QNKKRVIVAGL 115
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
D D+ FG + ++ LAD VTKL A C CG A T R + T L+GG
Sbjct: 116 DLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGL 175
Query: 245 DIYMPVCRQHY 255
+ Y C H+
Sbjct: 176 ETYEARCNLHH 186
>gi|419705381|ref|ZP_14232920.1| thymidine kinase [Mycoplasma canis UFG1]
gi|419706028|ref|ZP_14233560.1| thymidine kinase [Mycoplasma canis UFG4]
gi|384395201|gb|EIE41633.1| thymidine kinase [Mycoplasma canis UFG1]
gi|384395411|gb|EIE41842.1| thymidine kinase [Mycoplasma canis UFG4]
Length = 193
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++ P G + +I GPMF+GKT LL+RI+ N V K + DTR+ IV+ G
Sbjct: 2 TLKKPEGTLEIITGPMFSGKTEELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGA 61
Query: 132 KLPCCALTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKT 184
K + L + +++ + A D+V+ + DE F E D G
Sbjct: 62 KTKAIVIKNSKEILDHWNEEYKAVAIDEVNFL--DEGIF---------EVIDKLVLSGVR 110
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI +GLD D+LRR FG ++ +AD V KL A C C A F+ RK + ++G
Sbjct: 111 VIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVCLVCKSDAAFSFRKENNEQLNVLGDQ 170
Query: 245 DIYMPVCRQHYVSGQ 259
+ Y CR+ ++ G+
Sbjct: 171 E-YEARCRRCHILGE 184
>gi|418932437|ref|ZP_13486265.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377711519|gb|EHT35750.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1750]
Length = 183
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GK+ L+RR++ + V V K D RY + +V+H+G + ++ S
Sbjct: 1 MFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIM- 59
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+ VDVIGIDE QFF+D E DG VIVAGLD D+ F + ++
Sbjct: 60 ---THNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLM 116
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPVCRQHYV 256
+++ VTKL A C CG + T R + L+G ++ Y P CR H++
Sbjct: 117 AVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHI 172
>gi|384938063|ref|ZP_10029756.1| thymidine kinase [Mycoplasma canis UF31]
gi|384393612|gb|EIE40061.1| thymidine kinase [Mycoplasma canis UF31]
Length = 193
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++ P G + +I GPMF+GKT LL+RI+ N V K + DTR+ IV+ G
Sbjct: 2 TLKKPEGTLEIITGPMFSGKTEELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGA 61
Query: 132 KLPCCALTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKT 184
K + L + +++ + A D+V+ + DE F E D G
Sbjct: 62 KTKAIVIKNSKEILDHWNEEYKAVAIDEVNFL--DEGIF---------EVIDKLVLSGVR 110
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI +GLD D+LRR FG ++ +AD V KL A C C A F+ RK + ++G
Sbjct: 111 VIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVCLVCKSDAAFSFRKENNEQLNVLGDQ 170
Query: 245 DIYMPVCRQHYVSGQ 259
+ Y CR+ ++ G+
Sbjct: 171 E-YEARCRRCHILGE 184
>gi|399576528|ref|ZP_10770283.1| thymidine kinase [Halogranum salarium B-1]
gi|399237972|gb|EJN58901.1| thymidine kinase [Halogranum salarium B-1]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ + VAV K + D RYG +I +H+G +
Sbjct: 7 SGWIEVITGSMFSGKTEELLRRLRRAEIAEQEVAVFKPDVDDRYGEATIGSHNGRQWEAH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVD---VIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDG 192
+ + D YD++D V+ +DEA FF +L D C EA DG+ VIV+G D
Sbjct: 67 VVDA----EGEGIWDIYDKLDGEKVVAVDEANFFSTELVDVC-EALAADGRRVIVSGTDQ 121
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDI 246
+ F V +I LA+ V KL A C CG+ A R E + T L+G +
Sbjct: 122 TFRAEPFEPVPQLIALAEYVDKLRAICTVCGEPATRNQRLIEGEPAHVDDPTILVGAEES 181
Query: 247 YMPVCRQ 253
Y CR
Sbjct: 182 YEARCRN 188
>gi|408673836|ref|YP_006873584.1| Thymidine kinase [Emticicia oligotrophica DSM 17448]
gi|387855460|gb|AFK03557.1| Thymidine kinase [Emticicia oligotrophica DSM 17448]
Length = 191
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 5/182 (2%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I V+ G MF+GKT L+RR++ + V + K + D RY IV+H+ +
Sbjct: 15 SGWIEVVCGSMFSGKTEELIRRLKRAKIAKQKVEIFKPSIDVRYHEVDIVSHNQTAIRST 74
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ T +D +V+GIDEAQFF++ +GK VIVAGLD D
Sbjct: 75 PVHTSEEILL-MTTDC----EVVGIDEAQFFDNGIIAVVNKLAENGKRVIVAGLDMDSRG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +A+ VTK+ A C CG A ++ RK + ++G SD Y CR+ +
Sbjct: 130 IPFGPMPALMSIAEYVTKVHAICVVCGDIANYSYRKVPNEQQVMLGESDSYEARCRKCFH 189
Query: 257 SG 258
+G
Sbjct: 190 AG 191
>gi|419704084|ref|ZP_14231635.1| thymidine kinase [Mycoplasma canis PG 14]
gi|384393396|gb|EIE39846.1| thymidine kinase [Mycoplasma canis PG 14]
Length = 193
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++ P G + +I GPMF+GKT LL+RI+ N V K + DTR+ IV+ G
Sbjct: 2 TLKKPEGTLEIITGPMFSGKTEELLKRIKILEITEINTMVFKPSFDTRFDAKKIVSRTGA 61
Query: 132 KLPCCALTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKT 184
K + L + +++ + A D+V+ + DE F E D G
Sbjct: 62 KTKAIVIKNSKEILDHWNEEYKAVAIDEVNFL--DEGIF---------EVIDKLVLSGVR 110
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI +GLD D+LRR FG ++ +AD V KL A C C A F+ RK + ++G
Sbjct: 111 VIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVCLVCKSDAAFSFRKENNEQLNVLGDQ 170
Query: 245 DIYMPVCRQHYVSGQ 259
+ Y CR+ ++ G+
Sbjct: 171 E-YEARCRRCHILGE 184
>gi|291320689|ref|YP_003515954.1| thymidine kinase [Mycoplasma agalactiae]
gi|290753025|emb|CBH41001.1| Thymidine kinase [Mycoplasma agalactiae]
Length = 190
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ VI GPMF+GKT LL+RI G N VIK DTR+ + IV+ G K
Sbjct: 8 GQLEVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSDNEIVSRTGAKHKAIN 67
Query: 138 LTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
+++ L + K+ A D+V+ + D E+L + G VI +GLD D
Sbjct: 68 VSSSKEILDHWSPKYMCVAIDEVNFMDEDILSVIEELI--------YKGVRVICSGLDMD 119
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ RR F + ++ ADS+ KL A C C A F+ RK + + L+G S+ Y CR
Sbjct: 120 FKRRPFDVMAKVLASADSILKLKAVCLECKSDAGFSFRKVKSDELNLLGDSE-YEARCRI 178
Query: 254 HYVSGQ 259
++ G+
Sbjct: 179 CHIKGE 184
>gi|419704734|ref|ZP_14232279.1| thymidine kinase [Mycoplasma canis UF33]
gi|384393828|gb|EIE40276.1| thymidine kinase [Mycoplasma canis UF33]
Length = 193
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++ P G + +I GPMF+GKT LL+RI+ N V K + DTR+ IV+ G
Sbjct: 2 TLKKPEGTLEIITGPMFSGKTEELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGA 61
Query: 132 KLPCCALTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKT 184
K + L + +++ + A D+V+ + DE F E D G
Sbjct: 62 KTKAIVIKNSKEILDHWNEEYKAVAIDEVNFL--DEGIF---------EVIDKLVLSGVR 110
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGS 244
VI +GLD D+LRR FG ++ +AD V KL A C C A F+ RK + ++G
Sbjct: 111 VIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVCLVCKSDAAFSFRKENNEQLNVLGDQ 170
Query: 245 DIYMPVCRQHYVSGQ 259
+ Y CR+ ++ G+
Sbjct: 171 E-YEARCRRCHILGE 184
>gi|257066540|ref|YP_003152796.1| thymidine kinase [Anaerococcus prevotii DSM 20548]
gi|256798420|gb|ACV29075.1| Thymidine kinase [Anaerococcus prevotii DSM 20548]
Length = 201
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + V G MF+GKTT+L R + + K + D+R IV+HD ++L
Sbjct: 5 GRLIVHTGSMFSGKTTSLWRELYRMRIANYKIVAFKPSIDSRDDERKIVSHDNLELDAHK 64
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE----DLYDFCREAADHDGKTVIVAGLDGD 193
+ L R+ +D IGIDE QFF ++ D E T++V+GLD D
Sbjct: 65 VENL---REILAYAKNKDIDCIGIDELQFFPNDPGEVIDIFNELMAM-KITIVVSGLDMD 120
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
Y + F + +I+P+AD + K A C CG+ A+ + RKT + IG D+Y P+CR
Sbjct: 121 YKTQPFEIIKEIMPIADELVKHHAICASCGEDAWASYRKTSDESRIQIGSKDLYEPLCR 179
>gi|410697367|gb|AFV76435.1| thymidine kinase [Thermus oshimai JL-2]
Length = 192
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RR++ + V V K D RY L+++V+HDG ++
Sbjct: 9 GWIEVIVGPMFSGKSEELIRRVKRALIARQKVLVFKPRLDDRYHLEAVVSHDGERIEAIP 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ + +V+ +DE QF + EA G VI+AGLD D+
Sbjct: 69 VGSAEEMEAHLSPLP----EVVAVDEVQFLDRGLVGLAEALAGRGVRVILAGLDLDFRGE 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPVC 251
FG + +++ A+ V KLTA C CG A T R + L+G + Y P C
Sbjct: 125 PFGIMPELLARAEFVEKLTAICPRCGAPATRTQRLVDGKPARYSDPVILVGAKEHYEPRC 184
Query: 252 R 252
R
Sbjct: 185 R 185
>gi|418898706|ref|ZP_13452773.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418907051|ref|ZP_13461072.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377758265|gb|EHT82151.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC341D]
gi|377761507|gb|EHT85378.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC345D]
Length = 183
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GK+ L+RR++ + V V K D RY + +V+H+G + ++ S
Sbjct: 1 MFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIM- 59
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+ VDVIGIDE QFF+D E DG VIVAGLD D+ F + ++
Sbjct: 60 ---THDLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLM 116
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPVCRQHYV 256
+++ VTKL A C CG + T R + L+G ++ Y P CR H++
Sbjct: 117 AVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHI 172
>gi|60594475|pdb|1XX6|A Chain A, X-Ray Structure Of Clostridium Acetobutylicum Thymidine
Kinase With Adp. Northeast Structural Genomics Target
Car26.
gi|60594476|pdb|1XX6|B Chain B, X-Ray Structure Of Clostridium Acetobutylicum Thymidine
Kinase With Adp. Northeast Structural Genomics Target
Car26
Length = 191
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VIVGP ++GK+ L+RRI+ + + V K D RY + +V+H G K A
Sbjct: 8 GWVEVIVGPXYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHXGEKEQAVA 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + F D +VI IDE QFF+D + + + A+ G+ VI AGLD D+
Sbjct: 68 IKNSREILKYFEEDT----EVIAIDEVQFFDDEIVEIVNKIAES-GRRVICAGLDXDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
+ FG + ++ +A+ V K+ A C CG A T R + LIG + Y
Sbjct: 123 KPFGPIPELXAIAEFVDKIQAICVVCGNPATRTQRLINGKPAFYDDPVVLIGAXESYEAR 182
Query: 251 CRQHYVSGQ 259
CR+ +V Q
Sbjct: 183 CRKCHVVPQ 191
>gi|320335087|ref|YP_004171798.1| thymidine kinase [Deinococcus maricopensis DSM 21211]
gi|319756376|gb|ADV68133.1| Thymidine kinase [Deinococcus maricopensis DSM 21211]
Length = 203
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 93/193 (48%), Gaps = 16/193 (8%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VIVGPMF+GK+ L+RR+ + VAV K D RY + +H+G +
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRVNRAVIARQRVAVFKPAIDDRYHATFVASHNGRTVEAV 67
Query: 137 A-------LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVA 188
A L L+ +D DV+G DEAQFF+ L + ADH G VI+A
Sbjct: 68 AVRHTDDVLAHLTGQGTLLTADTA-LPDVVGFDEAQFFDAGLVPLALDLADH-GVRVILA 125
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIG 242
GLD D+ FG + D++ A+SV KLTA C CG A T R ++G
Sbjct: 126 GLDLDFRAEPFGLMPDLVARAESVEKLTAICVVCGAPATRTQRLIGGQPARFNDPVVMVG 185
Query: 243 GSDIYMPVCRQHY 255
+ Y CR H+
Sbjct: 186 AQEAYEARCRVHH 198
>gi|294508592|ref|YP_003572651.1| thymidine kinase [Salinibacter ruber M8]
gi|294344921|emb|CBH25699.1| thymidine kinase [Salinibacter ruber M8]
Length = 249
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GKT L+RR++ ++ V K D RY D +V+H+
Sbjct: 29 TGWMEVICGSMFSGKTEELIRRLRRARIARQHTRVFKPALDERYSEDEVVSHNE-----N 83
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
++TT + + DV+GIDEAQFF+D L C+ A+ DG VIV GLD DY
Sbjct: 84 SVTTTPVEAPPQIQELVQEADVVGIDEAQFFDDDLVPTCQALAE-DGHRVIVVGLDTDYR 142
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F + ++ +A+ VTKL A C CG A + R L+G ++ Y P CR +
Sbjct: 143 AEPFDPMPQLMAVAEHVTKLHAVCVVCGAPANHSQRIVPGEDRVLVGATEAYEPRCRACF 202
Query: 256 VSGQVVVEAAR 266
V V R
Sbjct: 203 EPEPVTVTRPR 213
>gi|390453402|ref|ZP_10238930.1| thymidine kinase [Paenibacillus peoriae KCTC 3763]
Length = 198
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
P+G I +I GPMF+ K+ L+RR Q Q G R V K +D RY D IV+ G +LP
Sbjct: 2 PTGRITIITGPMFSEKSGELIRRCQKLIQYGHRKVIAYKPAEDNRYAKDEIVSRIGYRLP 61
Query: 135 CCAL--TTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
++ Q+ + + DV+ DE QFF + +E A + GK VI GL+
Sbjct: 62 AISIPRKLTDELVQRILEET-KEADVVAFDEVQFFSRHIMALIQELA-YCGKHVIADGLN 119
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTE-----LIGGSD 245
D + FG + ++ +AD + KLT+ C CG A FT R + +IG S+
Sbjct: 120 LDCRGKEFGYIGGLLAMADDIEKLTSFCAVCGSSEAVFTQRMVNGKPSTVGPIVMIGDSE 179
Query: 246 IYMPVCRQHYV 256
Y P CR+ ++
Sbjct: 180 AYEPRCRKCFI 190
>gi|310779346|ref|YP_003967679.1| dethiobiotin synthase [Ilyobacter polytropus DSM 2926]
gi|309748669|gb|ADO83331.1| dethiobiotin synthase [Ilyobacter polytropus DSM 2926]
Length = 410
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GK+ L+RR+ + V K + D RY ++V+H + +
Sbjct: 10 GWIEVITGGMFSGKSEELIRRLIRSKYASQKVVAFKHSIDKRYDESNVVSHSSIFIEGVP 69
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ + F + Y +VIGIDE QFF E + +FC + +D GK VIVAGLD D+
Sbjct: 70 AASVKEMEKIF-YEKYSDAEVIGIDEVQFFGEPVVEFCEKLSDM-GKRVIVAGLDQDFRG 127
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
F + ++ A+ V KL+A C CG A T R L+G S+ Y
Sbjct: 128 EPFEPIDSLLAKAEYVDKLSAICAVCGNPASRTQRLVNGEPAYYNDPVVLVGASESYEAR 187
Query: 251 CRQHYV 256
CR+ +V
Sbjct: 188 CRKCHV 193
>gi|209965237|ref|YP_002298152.1| thymidine kinase [Rhodospirillum centenum SW]
gi|209958703|gb|ACI99339.1| thymidine kinase [Rhodospirillum centenum SW]
Length = 194
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 78 GEIHVIVGPMFAGKTTTLLRR-IQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G++ VI GPMF+GK+T +L+R I G + ++K D RY D +V HDG+
Sbjct: 4 GKLEVICGPMFSGKSTEILKRAIWYTHGTGTRIMLLKPAFDVRYAHDRVVNHDGIGFDAT 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQF-----FE-DLYDFCREAADHDGKTVIVAGL 190
+T + + + V + IDEAQF FE DL R + G V V+GL
Sbjct: 64 PITRMP--------EVPEDVSAVFIDEAQFCCAPHFEGDLVQSVRALLER-GIDVGVSGL 114
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
D D+ F + +AD+V KL +RC CG A + +K +T +G +D+Y P
Sbjct: 115 DTDWRGHPFPVTATLAGMADTVIKLRSRCAVCGHEATKSFKKHGNDRTLELGQADLYEPR 174
Query: 251 CRQHY 255
C H+
Sbjct: 175 CNLHW 179
>gi|386773168|ref|ZP_10095546.1| thymidine kinase [Brachybacterium paraconglomeratum LC44]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
+I GPMFAGKT LLRR+ GR V V+ + D R G D + TH G P L
Sbjct: 1 MIAGPMFAGKTEELLRRVHRARLAGRRVEVVGHSLDDRGGADRLSTHLGRSTPARMLEDP 60
Query: 142 SSFRQKFGS--DAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
R + + A +++++ +DEAQFF E DG V VAGL Y F
Sbjct: 61 EMLRGLWDAPEGAEGRIELLALDEAQFFGPALVPVLEQLLEDGIDVAVAGLCLTYDGEPF 120
Query: 200 GSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEE------TKTELIGGSDIYMPVCRQ 253
+ +++ A+ V KLTA C CG A F +R E+ +GG + Y CR
Sbjct: 121 SPLPELMARAEEVVKLTAVCTVCGADAAFHIRLVEDGADARCATAAQVGGGESYRARCRA 180
Query: 254 H 254
H
Sbjct: 181 H 181
>gi|311748756|ref|ZP_07722541.1| thymidine kinase [Algoriphagus sp. PR1]
gi|126577290|gb|EAZ81538.1| thymidine kinase [Algoriphagus sp. PR1]
Length = 197
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S G+I VI G MF+GKT L+RR+ + V + K D RY +V+HD
Sbjct: 13 SGGKGQIEVICGSMFSGKTEELIRRLNRAKIARQKVEIFKPAVDKRYSDSDVVSHDE--- 69
Query: 134 PCCALTTLSSFRQKFGSDAY---DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
T + S F D DVIGIDE QFF++ + GK +I+AGL
Sbjct: 70 -----TMIRSTPVDFAGDILLLSGDCDVIGIDEVQFFDEEIITVVQKLSRQGKRIILAGL 124
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
D D+ R F + ++ +A+ VTK+ A C CG A F+ R ++ ++G + Y
Sbjct: 125 DMDFEGRPFEPMPSLMAIAEFVTKVHAICMKCGDLAAFSFRLSDSKMKVMLGEKEAYEAR 184
Query: 251 CRQHY 255
CR+ +
Sbjct: 185 CRKCF 189
>gi|426405308|ref|YP_007024279.1| thymidine kinase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861976|gb|AFY03012.1| thymidine kinase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 204
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 69 SEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTH 128
SE S G + V+VG MF+GKT L+RR++ + V K D RY ++ +H
Sbjct: 2 SEFSYVHTRGWVEVVVGSMFSGKTEELIRRLRRAEFARLQIQVFKPIIDKRYNEMAVTSH 61
Query: 129 DGVKLPCCALTTLSSFRQKFGSDAYD----QVDVIGIDEAQFF-EDLYDFCREAADHDGK 183
D LTT+ S + ++ V+GIDE QFF ++L ++ A+ G
Sbjct: 62 D--------LTTIDSTPIHDAEEIWNLLKPNTKVVGIDEGQFFGQNLVQIAQDLAER-GL 112
Query: 184 TVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGG 243
VI+AGLD D+ + F + ++ +A+SVTK A C CG A T R L+G
Sbjct: 113 RVIIAGLDTDWQGKPFEPMPTLMAVAESVTKQHAVCVVCGSPACRTQRTAGGDGQVLVGT 172
Query: 244 SDIYMPVCRQHY 255
D Y CRQH+
Sbjct: 173 HDAYEARCRQHF 184
>gi|150388165|ref|YP_001318214.1| thymidine kinase [Alkaliphilus metalliredigens QYMF]
gi|149948027|gb|ABR46555.1| Thymidine kinase [Alkaliphilus metalliredigens QYMF]
Length = 195
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
S G I VIVGPM+AGK+ L+RRI V K + D RY I +H+G +L
Sbjct: 8 SKDGSIEVIVGPMYAGKSEELIRRINRAEIAELKVLAFKPSIDNRYSAQHITSHNGKQLK 67
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGD 193
C + + + D++ IDE QF D + C++ A+ GK VI +GLD D
Sbjct: 68 CIPVKDAKEVMEYIEKQDF---DILAIDEVQFLGDEVLKVCQDVANR-GKRVICSGLDMD 123
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIY 247
+ F V +++ +A+ VTKLTA C C A T R + + ++G + Y
Sbjct: 124 FRGEPFQVVPNLMAIAEHVTKLTAVCMTCKMPATRTQRLVDGRPAKYDDPIIMVGAKESY 183
Query: 248 MPVCRQHYV 256
CR+ +V
Sbjct: 184 EARCRKCHV 192
>gi|379335176|gb|AFD03164.1| thymidine kinase [uncultured bacterium W5-102b]
Length = 227
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 96/188 (51%), Gaps = 13/188 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + G I V+ G MF+GK+ L+RR++ VAV K D RY ++V+H+G +
Sbjct: 4 VPARGGWIEVVCGSMFSGKSEELMRRLRRAQIARLKVAVYKPALDNRYDDTAVVSHNGNR 63
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T S + G+ DV+GIDEAQFF E + + AD GK V++A LD
Sbjct: 64 IDAKPVETASDILRMAGNS-----DVVGIDEAQFFDEHIVEVSLRLADA-GKRVVLACLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
D+ FG V ++ +A+ VTKL A C+ CG A T R E + +G +
Sbjct: 118 MDFKGEPFGPVPPLLTVAEFVTKLQAICQQCGGPATRTQRLIEGMPASADEPVVKVGAME 177
Query: 246 IYMPVCRQ 253
Y P CR
Sbjct: 178 SYEPRCRN 185
>gi|323342349|ref|ZP_08082581.1| thymidine kinase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066848|ref|YP_004561706.1| thymidine kinase [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463461|gb|EFY08655.1| thymidine kinase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296794|dbj|BAK32665.1| thymidine kinase [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 204
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MFAGKT L+RRI +N+ V K D RY +V+H G +
Sbjct: 8 EGYIEVITGCMFAGKTEELIRRINVLKFAHKNIIVFKPAVDNRYSDSKVVSHAGTSVQSV 67
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + DV+ IDE QFF E++ C A +GK V+VAGLD D+
Sbjct: 68 VVDKATDILKYVTK----ETDVVAIDEVQFFDEEIVKVCDHLA-LEGKRVMVAGLDMDFR 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMP 249
FG + ++ A+ VTKLTA C CG A T R + +IG S+ Y
Sbjct: 123 GEPFGVIPKLMTTAEFVTKLTAVCTECGAPATRTQRLVNGKPASYHDPVVMIGASESYEA 182
Query: 250 VCRQHYV 256
CR ++
Sbjct: 183 RCRHDHI 189
>gi|51894174|ref|YP_076865.1| thymidine kinase [Symbiobacterium thermophilum IAM 14863]
gi|51857863|dbj|BAD42021.1| Thymidine kinase [Symbiobacterium thermophilum IAM 14863]
Length = 195
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 7/185 (3%)
Query: 78 GEIHVIV-GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPC 135
G I VI G M+AGKTT L+RR++ R V + RY D IVTHDG++
Sbjct: 8 GWIDVITSGSMYAGKTTELIRRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTHDGLRFE- 66
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDY 194
A+ T S + ++ + + DVIGIDEAQF++ L D +E A+ G VI AGL
Sbjct: 67 -AVHTDSPLEILWYAEIH-KPDVIGIDEAQFYDVSLVDTVQELANR-GHYVIAAGLSQTS 123
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
R FG + ++ LADS+T + C CG+ A T +T+ ++GG + Y CR+
Sbjct: 124 EGRPFGCMPQLLALADSITSVYGVCVVCGEPATKPFALTAKTEDVVVGGGEKYEARCRKC 183
Query: 255 YVSGQ 259
++ G+
Sbjct: 184 WLEGR 188
>gi|197294747|ref|YP_001799288.1| thymidine kinase [Candidatus Phytoplasma australiense]
gi|171854074|emb|CAM12047.1| Thymidine kinase [Candidatus Phytoplasma australiense]
Length = 199
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPC 135
G I VI GPMFAGKT L++R Q + +N+ K D RY + IV+H K P
Sbjct: 6 QGFIEVICGPMFAGKTEALIKRYQEAQKLKKNILSFKPRIDNRYSSEGFIVSHSQNKFPA 65
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDY 194
+ + + D+I IDE QF + D++ A+ + + +I+AGLD D+
Sbjct: 66 ILIDQ----SRDILPFVTPETDLIIIDEVQFLDNDIFGIVDYLANQNIQ-IILAGLDLDF 120
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYM 248
+ FG + ++ LA+ VTKLTA C GK+A T R T L+GG + +
Sbjct: 121 KGKPFGPMPYLLALAEVVTKLTAICAVSGKKATKTQRLINGKPAKSNDSTILVGGQEYHE 180
Query: 249 PVCRQHY 255
P CR+H+
Sbjct: 181 PRCRRHH 187
>gi|373453903|ref|ZP_09545789.1| hypothetical protein HMPREF0984_02831 [Eubacterium sp. 3_1_31]
gi|371962895|gb|EHO80471.1| hypothetical protein HMPREF0984_02831 [Eubacterium sp. 3_1_31]
Length = 201
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MFAGKT L+RRI+ + +AV K D RY + +V+H G
Sbjct: 7 EGWLEVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDNRYSEECVVSHAG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+++ SF + +D + DVI IDE QFF E++ C AD GK V+ AGLD
Sbjct: 61 --SSVKSFNISKAREIFDYIDDSYDVIAIDEVQFFDEEIVQICDYFADR-GKRVMAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ F + ++ A+ VTKLTA C CG A T R + + ++G S+
Sbjct: 118 MDFRGVPFSVMPELFTHAEFVTKLTAVCTKCGAPATRTQRLVNGKPASYDDPIIVVGASE 177
Query: 246 IYMPVCRQ-HYVSG--QVVVEAAR 266
Y CR H V G Q+ VE +
Sbjct: 178 QYEARCRHCHEVEGRPQIHVEMKK 201
>gi|238809971|dbj|BAH69761.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 208
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 61 SLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY 120
+L+ + ++ + S G + VI GPMF+GKT L++RI+ V+K DTR+
Sbjct: 11 NLEEKTMYLKQS----DGILEVITGPMFSGKTEELIKRIKILEIADIKTLVLKPKFDTRF 66
Query: 121 GLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAAD 179
IV+ G K+ + SS KF +Y V IDE F E + D E
Sbjct: 67 SETEIVSRTGAKVIAKNIKK-SSDIMKFWDPSYKAV---AIDEINFLDEGILDVIDELV- 121
Query: 180 HDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE 239
G V+ +GLD D+LRR FG I+ +AD +TKL A C C A F+ RKT E
Sbjct: 122 LKGVRVLCSGLDMDFLRRPFGVTPAILAIADHITKLKAVCMKCKSSAGFSFRKTNEQSLN 181
Query: 240 LIGGSDIYMPVCRQHYVSGQV 260
+ G D Y CR ++ G++
Sbjct: 182 SL-GDDTYEARCRVCHIKGEL 201
>gi|83815838|ref|YP_446657.1| thymidine kinase [Salinibacter ruber DSM 13855]
gi|109892491|sp|Q2RZH4.1|KITH_SALRD RecName: Full=Thymidine kinase
gi|83757232|gb|ABC45345.1| thymidine kinase [Salinibacter ruber DSM 13855]
Length = 227
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GKT L+RR++ ++ V K D RY D +V+H+
Sbjct: 7 TGWMEVICGSMFSGKTEELIRRLRRARIARQHTRVFKPALDERYSEDEVVSHNE-----N 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
++TT + + DV+GIDEAQFF+D L C+ A+ DG VIV GLD DY
Sbjct: 62 SVTTTPVEAPPQIQELVQEADVVGIDEAQFFDDDLVPTCQALAE-DGHRVIVVGLDTDYR 120
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F + ++ +A+ VTKL A C CG A + R L+G ++ Y P CR +
Sbjct: 121 AEPFDPMPQLMAVAEHVTKLHAVCVVCGAPANHSQRIVPGEDRVLVGATEAYEPRCRACF 180
Query: 256 VSGQVVVEAAR 266
V V R
Sbjct: 181 EPEPVTVTRPR 191
>gi|293399756|ref|ZP_06643902.1| thymidine kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306156|gb|EFE47399.1| thymidine kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 201
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + VI G MFAGKT L+RRI+ + +AV K D RY + +V+H G
Sbjct: 7 EGWLEVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPRIDNRYSEECVVSHAG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+++ SF + +D + DVI IDE QFF E++ C AD GK V+ AGLD
Sbjct: 61 --SSVKSFNISKAREIFDYIDDSYDVIAIDEVQFFDEEIVQICDYFADR-GKRVMAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ F + ++ A+ VTKLTA C CG A T R + + ++G S+
Sbjct: 118 MDFRGVPFSVMPELFTHAEFVTKLTAVCTKCGAPATRTQRLVNGKPASYDDPIIVVGASE 177
Query: 246 IYMPVCRQ-HYVSG--QVVVEAAR 266
Y CR H V G Q+ VE +
Sbjct: 178 QYEARCRHCHEVEGRPQIHVEMKK 201
>gi|223983555|ref|ZP_03633738.1| hypothetical protein HOLDEFILI_01019 [Holdemania filiformis DSM
12042]
gi|223964483|gb|EEF68812.1| hypothetical protein HOLDEFILI_01019 [Holdemania filiformis DSM
12042]
Length = 202
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI G MFAGKT L+RRI+ + V V K D RY +V+H G ++
Sbjct: 9 GYVEVISGCMFAGKTEELIRRIKVLEFAKKKVLVFKPAIDNRYSETKVVSHAGSEVDSIV 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ D VDVI IDE QFF ED+ + C A GK V+ AGLD D+
Sbjct: 69 IREAKEILNYVD----DSVDVIAIDEVQFFDEDIIEICDYYAKK-GKRVMAAGLDMDFKG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG + +I A+ VTKLTA C CG A T R L+G S+ Y
Sbjct: 124 EPFGVMPILITKAEFVTKLTAVCTICGAPATRTQRLVNGEPANYDDPIILVGASESYEAR 183
Query: 251 CRQ 253
CR
Sbjct: 184 CRH 186
>gi|322368918|ref|ZP_08043485.1| thymidine kinase [Haladaptatus paucihalophilus DX253]
gi|320551649|gb|EFW93296.1| thymidine kinase [Haladaptatus paucihalophilus DX253]
Length = 195
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GKT LLRR++ G+ VAV K D RYG D++ +HDG
Sbjct: 7 SGWVEVITGCMFSGKTEELLRRLRRAEIAGQEVAVFKPALDDRYGEDTVGSHDGSSWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ D + V+ IDEA FF E+L C A+ DG+ V+V+G D +
Sbjct: 67 VVEPDDDGVWSI-PDGLNGEQVVAIDEANFFSEELVSVCEFLAE-DGRRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F V +I LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 GEPFDPVPQLIALAEYVEKLQAICATCGEPATRNQRLIDGEPAHVDDPTILVGAQESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|297585443|ref|YP_003701223.1| Thymidine kinase [Bacillus selenitireducens MLS10]
gi|297143900|gb|ADI00658.1| Thymidine kinase [Bacillus selenitireducens MLS10]
Length = 209
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI G MF+GK+ L+RR++ + V V K D RY + +V+H G K+
Sbjct: 8 GWLEVICGSMFSGKSEELIRRVRRAHYGRQKVQVFKPAIDNRYSDEEVVSHSGNKVTAVP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ + S V+ DE QFF++ E DG VIVAGLD D+
Sbjct: 68 VGASEDVIELIHS----STQVVAFDEVQFFDEHIVALAEKLADDGIRVIVAGLDQDFRGE 123
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPVC 251
FG V ++ +A+SVTKL A C CG A T R + + L+G S+ Y P C
Sbjct: 124 PFGVVPQLMSMAESVTKLQAICLSCGSPASRTQRLIDGRPASFDDPIILVGASESYEPRC 183
Query: 252 RQ 253
R
Sbjct: 184 RH 185
>gi|115378661|ref|ZP_01465811.1| thymidine kinase [Stigmatella aurantiaca DW4/3-1]
gi|310823072|ref|YP_003955430.1| thymidine kinase [Stigmatella aurantiaca DW4/3-1]
gi|115364327|gb|EAU63412.1| thymidine kinase [Stigmatella aurantiaca DW4/3-1]
gi|309396144|gb|ADO73603.1| Thymidine kinase [Stigmatella aurantiaca DW4/3-1]
Length = 199
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPMF+GKT L+RR++ + V V K D RY +V+H +KL
Sbjct: 9 GWIEVVCGPMFSGKTEELIRRVKRAVYGKQRVQVFKPKVDDRYDETQVVSHSQLKLTSTP 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ D V+GIDE QFF ++ C EA + G VI AGLD DY
Sbjct: 69 IERAEEIFYHLLPDT----QVVGIDEVQFFGPEVVQVC-EALAYRGVRVICAGLDQDYQG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
R F + ++ +A+ VTK A C CG A + R + ++G + Y CR+
Sbjct: 124 RPFEPMPQLLAVAEYVTKQLAICVVCGNPANRSQRLVSSEERVVVGAAGAYEARCRR 180
>gi|343082904|ref|YP_004772199.1| thymidine kinase [Cyclobacterium marinum DSM 745]
gi|342351438|gb|AEL23968.1| Thymidine kinase [Cyclobacterium marinum DSM 745]
Length = 192
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 11/185 (5%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S P G++ VI G MF+GKT L+RR+ + V + K D RY +++V+H+
Sbjct: 13 SGPKGQLEVICGSMFSGKTEELIRRLNRALIAKQRVEIFKPAIDKRYDENNVVSHNE--- 69
Query: 134 PCCALTTLSSFRQKFGSDAY---DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGL 190
+ S +F D DV+GIDE QFF+ E ++G VIVAGL
Sbjct: 70 -----NIIRSTPVQFADDILLLAGNCDVVGIDEVQFFDAQIIPVVEQLANNGIRVIVAGL 124
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
D D+ + F + ++ +A+ VTK+ A C CG A ++ R + + ++G + Y
Sbjct: 125 DMDFEGKPFEPMPQLLAIAEYVTKVHAICMKCGDLASYSFRLSGDKSKVMLGEKESYEAR 184
Query: 251 CRQHY 255
CR+ +
Sbjct: 185 CRKCF 189
>gi|308190273|ref|YP_003923204.1| thymidine kinase [Mycoplasma fermentans JER]
gi|319777642|ref|YP_004137293.1| thymidine kinase [Mycoplasma fermentans M64]
gi|49354328|gb|AAT65056.1| thymidine kinase [Mycoplasma phage phiMFV1]
gi|307625015|gb|ADN69320.1| thymidine kinase [Mycoplasma fermentans JER]
gi|318038717|gb|ADV34916.1| Thymidine kinase [Mycoplasma fermentans M64]
Length = 192
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+ G + VI GPMF+GKT L++RI+ V+K DTR+ IV+ G K
Sbjct: 3 LKQSDGILEVITGPMFSGKTEELIKRIKILEIADIKTLVLKPKFDTRFSETEIVSRTGAK 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + SS KF +Y V IDE F E + D E G V+ +GLD
Sbjct: 63 VIAKNIKK-SSDIMKFWDPSYKAV---AIDEINFLDEGILDVIDELV-LKGVRVLCSGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
D+LRR FG I+ +AD +TKL A C C A F+ RKT E + G D Y C
Sbjct: 118 MDFLRRPFGVTPAILAIADHITKLKAVCMKCKSSAGFSFRKTNEQSLNSL-GDDTYEARC 176
Query: 252 RQHYVSGQV 260
R ++ G++
Sbjct: 177 RVCHIKGEL 185
>gi|335041018|ref|ZP_08534136.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334179168|gb|EGL81815.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 209
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V+ G I VI G MF+GK+ L+RR++ + V K D RY ++V+H+GV
Sbjct: 3 VNKRDGWIEVICGSMFSGKSEELIRRVRLARYAKQPTQVFKPVIDNRYSEVAVVSHNGVS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+P + S ++ ++ + IDE QFF E + + + AD GK VI AGLD
Sbjct: 63 IPATCVEQASHIAEQV----RNETACVAIDEVQFFDETVVEVAQYLADQ-GKRVICAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSD 245
D+ + FG ++ A+ VTKL A C CG A T R E + L+G +
Sbjct: 118 QDFRGQPFGPTPLLLACAEYVTKLQAVCACCGAPASRTQRLINGEPAHVDDPVILVGAKE 177
Query: 246 IYMPVCRQ-HYVSG 258
Y P CR H V G
Sbjct: 178 SYEPRCRHCHEVKG 191
>gi|222152016|ref|YP_002561176.1| thymidine kinase [Macrococcus caseolyticus JCSC5402]
gi|254807843|sp|B9E8G2.1|KITH_MACCJ RecName: Full=Thymidine kinase
gi|222121145|dbj|BAH18480.1| thymidine kinase [Macrococcus caseolyticus JCSC5402]
Length = 191
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I + G MF+GK+ L+RR++ + V V K + D RY +V+H+G K+
Sbjct: 7 SGWIECVTGSMFSGKSEELIRRVRRGLFAKQKVIVFKPSIDDRYSELEVVSHNGNKVEAV 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S + +A+ D+I IDE QFF+ D+ + A+ +G VIVAGLD D+
Sbjct: 67 NVHHSSEILEHV-KEAH---DIIAIDEVQFFDNDIVGVATQLAE-EGYRVIVAGLDMDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
F V +++ +++ VTKL A C CG + T R + + L+G + Y P
Sbjct: 122 GVPFEPVPELMAVSEHVTKLQAVCSVCGAPSSRTQRLIDGVPAKFDDPIILVGAKESYEP 181
Query: 250 VCRQHYV 256
CR+H+V
Sbjct: 182 RCREHHV 188
>gi|343491984|ref|ZP_08730363.1| thymidine kinase [Mycoplasma columbinum SF7]
gi|343128438|gb|EGV00240.1| thymidine kinase [Mycoplasma columbinum SF7]
Length = 198
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 5/187 (2%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S +G + VI GPMF+GKT LL+RI+ V+K DTR+ + +V+ G K+
Sbjct: 5 SHGNGLLEVITGPMFSGKTEELLKRIKILEIADIKTLVVKPQFDTRFSENKLVSRTGGKI 64
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
++ + Y V IDE F + + +G VI +GLD D
Sbjct: 65 KAHNISKAKDILT-LWNHTYKAV---AIDEVNFLDKGLLKVIDKLVLNGVRVICSGLDMD 120
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+LRR FG + I+ +AD V KL A C C A F+ RK + T L+G S+ Y CR
Sbjct: 121 FLRRPFGIMPQILSIADEVVKLKAVCVKCKTSAGFSFRKVKSTDLNLLGDSE-YEARCRI 179
Query: 254 HYVSGQV 260
++SG++
Sbjct: 180 CHISGEL 186
>gi|338730235|ref|YP_004659627.1| Thymidine kinase [Thermotoga thermarum DSM 5069]
gi|335364586|gb|AEH50531.1| Thymidine kinase [Thermotoga thermarum DSM 5069]
Length = 186
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G++ +IVGPM++GKTT LL ++ + V K D RYG + TH G+++
Sbjct: 2 AGKLTMIVGPMYSGKTTELLSFVEIYKLGRKKFKVFKPAIDDRYGKSLVKTHTGLEVEAI 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
A+ +++D + IDE QFF+ DL ++ D + V AGLD +
Sbjct: 62 AVEGSKDIVNLLE----EKIDAVFIDEVQFFDKDLVRIVKQLIDSN-VDVFCAGLDMTFK 116
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F + ++ +AD V K A CE CG+ +A T + TEE K IGG + Y+ VCR
Sbjct: 117 QNPFETTAALMAIADEVIKKKAVCEVCGEYKANLTYKVTEEEKEIDIGGKEKYIAVCRDC 176
Query: 255 Y 255
Y
Sbjct: 177 Y 177
>gi|448602401|ref|ZP_21656457.1| thymidine kinase [Haloferax sulfurifontis ATCC BAA-897]
gi|445747916|gb|ELZ99370.1| thymidine kinase [Haloferax sulfurifontis ATCC BAA-897]
Length = 195
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G+ ++V K D RYG ++ +H G
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + + DV+ IDEA FF +L D C EA DGK V+V+G D +
Sbjct: 67 VVPSEGEGVWQIAEELNGE-DVVAIDEANFFSAELVDVC-EALAADGKRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F V ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 AEPFDPVPQLMALAEYVDKLQAICTVCGEPATRNQRLIDGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|313126161|ref|YP_004036431.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
gi|448286002|ref|ZP_21477238.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
gi|312292526|gb|ADQ66986.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
gi|445575301|gb|ELY29777.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
Length = 195
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
+ SG + VI G MF+GKT LLRR++ G+ VAV K + D RYG ++ +H G +
Sbjct: 5 TKSGWVEVITGSMFSGKTEELLRRLRRAEIAGQEVAVFKPDIDDRYGETTVGSHAGSEWE 64
Query: 135 CCALTTLSSFRQKFG-SDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDG 192
A S + + D + DV+ IDEA FF +L D C A DG+ V+V+G D
Sbjct: 65 --AHVVASDGEEMWNLLDKLNGEDVVAIDEANFFSAELVDICEHLA-ADGRRVLVSGTDQ 121
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDI 246
+ F V ++ +A+ V KL A C CG+ A R + E T ++G +
Sbjct: 122 TFRGEPFDPVPQLMAMAEYVDKLQAICSVCGEPASRNQRLVDGEPAHAEGPTIVVGAEES 181
Query: 247 YMPVCRQ 253
Y CR
Sbjct: 182 YEARCRN 188
>gi|313678840|ref|YP_004056580.1| thymidine kinase [Mycoplasma bovis PG45]
gi|392430352|ref|YP_006471397.1| thymidine kinase [Mycoplasma bovis HB0801]
gi|312950451|gb|ADR25046.1| thymidine kinase [Mycoplasma bovis PG45]
gi|392051761|gb|AFM52136.1| thymidine kinase [Mycoplasma bovis HB0801]
Length = 190
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 91/188 (48%), Gaps = 7/188 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+ S G++ VI GPMF+GKT LL+RI G N VIK DTR+ D IV+ G +
Sbjct: 3 LKSGLGQLEVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSKDEIVSRTGAR 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + + D + IDE F ED+ E G VI +GLD
Sbjct: 63 HKAINVANSKEILKYWNPDYM----CVAIDEVNFMDEDILTVIDELI-VKGVRVICSGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
D+ RR F + ++ AD++ KL A C C A F+ RK + + L+G S+ Y C
Sbjct: 118 MDFKRRPFDVMARVLASADNILKLKAVCLECKSDAGFSFRKVKSDELNLLGDSE-YEARC 176
Query: 252 RQHYVSGQ 259
R ++ G+
Sbjct: 177 RVCHIKGE 184
>gi|409096813|ref|ZP_11216837.1| thymidine kinase [Thermococcus zilligii AN1]
Length = 194
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC 135
P G + VI GPMFAGKTT L++R++ + R VA+ K DTRY + +V H+G+
Sbjct: 3 PGGFLEVITGPMFAGKTTELIKRVERQAFARRKVALFKPAIDTRYSAEGVVAHNGLSYGA 62
Query: 136 CALTTLSSFRQKFGSDAYDQ-VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
+ T + + ++VIG+DE QFF + G VI +GL+ D+
Sbjct: 63 YIVPTSEEGVELIREVTLREGLEVIGVDEVQFFPMKIVEVLDTLASRGVYVIASGLNLDF 122
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYM 248
F +++ ADS+ LTA C CG+ A + R + ++ +GG + Y
Sbjct: 123 KGDPFPVTRELLVRADSIVYLTAVCTVCGRPATRSQRLIDGKPAPRDSPVIQVGGRESYE 182
Query: 249 PVCRQHYV 256
CR+H++
Sbjct: 183 ARCREHHI 190
>gi|157364344|ref|YP_001471111.1| thymidine kinase [Thermotoga lettingae TMO]
gi|166987681|sp|A8F7B3.1|KITH_THELT RecName: Full=Thymidine kinase
gi|157314948|gb|ABV34047.1| Thymidine kinase [Thermotoga lettingae TMO]
Length = 185
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G++ +IVGPM++GKTT LL ++ + V K + D RYG+D + TH GV++
Sbjct: 2 AGKLTLIVGPMYSGKTTELLSYVEIYRLGRKKTIVFKPSLDNRYGVDCVKTHAGVEVEAI 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
A+ S+ K+ VD + +DE QFF+ DL R+ D D + AGLD +
Sbjct: 62 AVEK-SADAMKYIKQP---VDAVFVDEVQFFDKDLVKIVRQLLDQD-VDIFCAGLDMTFK 116
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F + + ++ LA+ + K A C CG+ A T + ++ IGG + Y+ VCR
Sbjct: 117 QNPFETTMLLMSLANEIIKKKAVCHICGEYNATLTYKFVQDDSEIDIGGKEKYIAVCRDC 176
Query: 255 Y 255
Y
Sbjct: 177 Y 177
>gi|33324258|gb|AAQ07938.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRD--KTIKTHSGIQLRSKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDV--IGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S + SD +D+ + IDEA FF+DL CR AD + K +I+AGL+ +
Sbjct: 68 CKIIESTQL---SDVGSLIDIHAVVIDEAHFFDDLIK-CRTWADEE-KIIILAGLNASFE 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
++ F ++ I P V + C C + A F +RK + L GGS++Y+ C
Sbjct: 123 QKMFPPIVRIFPYCSWVKYIGRTCMRCNRHNACFNVRKNADKTLILAGGSELYVTCCNN 181
>gi|351737407|gb|AEQ60442.1| Thymidine kinase [Acanthamoeba castellanii mamavirus]
Length = 216
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-----IVTHDGVKLPCCALTTL 141
MF+GKTT +R I+ + G+ +IK+ +D RY D + TH+ + C +
Sbjct: 1 MFSGKTTEFIRLIERKKIAGKKCLIIKNYRDIRYDSDDNDKYHVTTHNNIIYRNCDIMFT 60
Query: 142 SSFRQKFGSDAY-DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
+ + D + ++ DVIGI+E FFE + DF E A+ G VI++ L+ Y + F
Sbjct: 61 DNLNKTSLIDTFQEKYDVIGIEEGFFFEGVTDFSNELANR-GMEVIISTLESSYKQEIFS 119
Query: 201 SVIDIIPLADSVTKLTARCEFCG-KRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ +I +++ V KL A C C A FT+R E + L+GG D Y VCR+
Sbjct: 120 EIGKLIAISEDVIKLKAICMGCKISDASFTIRTIESDEKILVGGIDKYQSVCRK 173
>gi|160916059|ref|ZP_02078266.1| hypothetical protein EUBDOL_02086 [Eubacterium dolichum DSM 3991]
gi|158431783|gb|EDP10072.1| thymidine kinase [Eubacterium dolichum DSM 3991]
Length = 191
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI G MFAGK+ L+RRI+ + +A+ K D RY IV+H+G ++
Sbjct: 7 QGFIEVITGCMFAGKSEELIRRIKTLEYAHKRIAIFKPAIDKRYSDAYIVSHNGKRVKSF 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++ D DV+ IDE QFF E++ C E A+ GK VIVAGLD D+
Sbjct: 67 VISKAEEIYAYMQED----YDVVAIDEVQFFDEEIVKICNELANQ-GKRVIVAGLDMDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ A+ VTKLTA C CG A + R + K +G + Y
Sbjct: 122 GEPFKVMPALLATAEFVTKLTAVCMKCGAPATRSQRLIDGKPANVNDKIIQVGAKEAYEA 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|448546437|ref|ZP_21626601.1| thymidine kinase [Haloferax sp. ATCC BAA-646]
gi|448548474|ref|ZP_21627693.1| thymidine kinase [Haloferax sp. ATCC BAA-645]
gi|448557823|ref|ZP_21632809.1| thymidine kinase [Haloferax sp. ATCC BAA-644]
gi|445702890|gb|ELZ54830.1| thymidine kinase [Haloferax sp. ATCC BAA-646]
gi|445713960|gb|ELZ65731.1| thymidine kinase [Haloferax sp. ATCC BAA-644]
gi|445714232|gb|ELZ65997.1| thymidine kinase [Haloferax sp. ATCC BAA-645]
Length = 195
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++++V K D RYG ++ +H G
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRAEIAGQDISVFKPQLDDRYGETTVGSHAGRSWEAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + + DV+ IDEA FF +L D C EA DGK V+V+G D +
Sbjct: 67 VVPSEGEGVWQIAEELNGE-DVVAIDEANFFSAELVDVC-EALAADGKRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 AEPFDPLPQLMALAEYVDKLQAICTICGEPATRNQRLIDGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|217967192|ref|YP_002352698.1| thymidine kinase [Dictyoglomus turgidum DSM 6724]
gi|226729738|sp|B8E001.1|KITH_DICTD RecName: Full=Thymidine kinase
gi|217336291|gb|ACK42084.1| Thymidine kinase [Dictyoglomus turgidum DSM 6724]
Length = 198
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
VS SG I VI G M++GK+ L+RR++ + V V K + D RY D + +H G+K
Sbjct: 4 VSGASGWIEVICGGMYSGKSEELIRRVRRAQIAKQKVQVFKHSLDIRYDKDYVASHTGLK 63
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ +++ + + D V+ I+E QFF+ L C+ AD GK VIVAGLD
Sbjct: 64 IEAIPVSSSADIERLVKDDT----QVVAIEEGQFFDMGLVKVCQRLADR-GKRVIVAGLD 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
D+ FG + ++ +A+ V KL A C CG A T R + + L+G +
Sbjct: 119 QDFRGEPFGPMPYLMAVAEYVDKLHAICMKCGNVASRTQRIIDGKPAYYDDPIILVGAFE 178
Query: 246 IYMPVCRQHYV 256
Y CR +V
Sbjct: 179 TYEARCRHCHV 189
>gi|310659439|ref|YP_003937160.1| Thymidine kinase [[Clostridium] sticklandii]
gi|308826217|emb|CBH22255.1| Thymidine kinase [[Clostridium] sticklandii]
Length = 191
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
S G I +VGPM++GK+ L+RR++ + V V K D RY + +V+H G+ +
Sbjct: 5 SGHGYIEAVVGPMYSGKSEELIRRLKRAKIAKQEVIVFKPCIDNRYSKEDVVSHSGISIR 64
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
A+ + + V+GIDE QFF E + D E AD G VI AGLD D
Sbjct: 65 AIAINHTEEIHKYITG----ETQVVGIDEVQFFDEGIVDVALELADK-GIRVIAAGLDLD 119
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIY 247
+ FG V +++ A+ V KL A C CG A T R + L+G ++ Y
Sbjct: 120 FKAEPFGPVPELLARAEFVDKLQAVCVKCGAPATRTQRLINKEPARYDDPIILVGATESY 179
Query: 248 MPVCRQ 253
CR+
Sbjct: 180 EARCRK 185
>gi|33324270|gb|AAQ07944.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + VA IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVAFIKSTKNTRD--KTIKTHSGIQLRPKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S Q + + + IDEA FF+DL CR AD + K +I+AGL+ + ++
Sbjct: 68 CKIIES-TQLSDVGSLTDIHAVVIDEAHFFDDLIK-CRTWADEE-KIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P V + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFPPIVRIFPYCSWVKYIGRTCMKCNRHNACFNVRKNADKALILAGGSELYVTCCNN 181
>gi|292657004|ref|YP_003536901.1| thymidine kinase [Haloferax volcanii DS2]
gi|448293605|ref|ZP_21483709.1| thymidine kinase [Haloferax volcanii DS2]
gi|291371393|gb|ADE03620.1| thymidine kinase [Haloferax volcanii DS2]
gi|445569936|gb|ELY24503.1| thymidine kinase [Haloferax volcanii DS2]
Length = 195
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G+ ++V K D RYG ++ +H G
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + + DV+ IDEA FF +L D C EA DGK V+V+G D +
Sbjct: 67 VVPSEGEGVWQIAEELNGE-DVVAIDEANFFSAELVDVC-EALAADGKRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 AEPFDPLPQLMALAEYVDKLQAICTLCGEPATRNQRLIDGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|215275159|sp|P0C8I5.1|KITH_ASFP4 RecName: Full=Thymidine kinase; Short=TDK
Length = 188
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRD--KTIKTHSGIQLRPKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S Q + + + IDEA FF+DL CR AD + K +I+AGL+ + ++
Sbjct: 68 CKIIES-TQLSDVGSLTDIHAVVIDEAHFFDDLIK-CRTWADEE-KIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F S++ I P V + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFPSIVRIFPYCSWVKYIGRTCMKCNRHNACFNVRKNADKTLILAGGSELYVTCCNN 181
>gi|399924910|ref|ZP_10782268.1| thymidine kinase [Peptoniphilus rhinitidis 1-13]
Length = 200
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 85 GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSS- 143
G MF+GKT++L + ++ + V K D RY IVTHD + L + ++
Sbjct: 13 GSMFSGKTSSLEKDLKRFSIANYKVVAFKPIVDKRYAKSEIVTHDKISLDAIEVESIGEI 72
Query: 144 --FRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKTVIVAGLDGDYLRRS 198
F +K + +VIGIDE QF D + + + G TV++AGLD DY+ R
Sbjct: 73 LDFAKK------NLPEVIGIDEIQFLNDEPEVVIKNLEKILSMGITVVMAGLDMDYMARP 126
Query: 199 FGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSG 258
F V +I+P D + K A C+ CG A+ + RK + K +G + Y P+CR Y+
Sbjct: 127 FEIVKEIMPKVDYLNKHHAVCKRCGTDAWVSHRKIKSNKRVELGAVEEYEPLCRNCYIEA 186
>gi|389843177|ref|YP_006345257.1| thymidine kinase [Mesotoga prima MesG1.Ag.4.2]
gi|387857923|gb|AFK06014.1| thymidine kinase [Mesotoga prima MesG1.Ag.4.2]
Length = 190
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG++ V+VGPM++GKT+TLL I+ T + + V K D RY D +V+H G
Sbjct: 2 SGKLTVVVGPMYSGKTSTLLSMIEIYTLGKKRIKVFKPVIDDRYSSDHVVSHSGQMAEAI 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S ++ S ++D I IDE FF++ E G V GLD Y
Sbjct: 62 NVYDSSEIKE-IVSKEKGKLDAIFIDEINFFDENLLRIVEEIIFSGVDVFCVGLDLSYKH 120
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTEL-IGGSDIYMPVCRQH 254
R F +++ AD V K A C CG+ A T R + T +E+ IGG + Y+ VCR
Sbjct: 121 RPFAVTANLMAAADEVIKKKAVCHICGEYNATVTHRISGPTDSEIDIGGMEKYIAVCRDC 180
Query: 255 Y 255
Y
Sbjct: 181 Y 181
>gi|384439449|ref|YP_005654173.1| thymidine kinase [Thermus sp. CCB_US3_UF1]
gi|359290582|gb|AEV16099.1| Thymidine kinase [Thermus sp. CCB_US3_UF1]
Length = 188
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI GPMF+GK+ L+RR++ + V V K D RYG +V+HDG ++
Sbjct: 4 QGWIEVIAGPMFSGKSEELIRRVKRALIARQRVLVFKPRLDNRYGEGHVVSHDGERVEAI 63
Query: 137 ALTTLSSFRQKFGSDAYDQ--VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
+ +AY + V+ +DE QF + E +G VI+AGLD D+
Sbjct: 64 PIARAEEM------EAYLKPLPQVVAVDEVQFLDRALLPLVERLAQEGVRVILAGLDLDF 117
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYM 248
FG + +++ A+ V KLTA C CG A T R + L+G + Y
Sbjct: 118 RGEPFGLMPELLARAEFVEKLTAICPRCGAPATRTQRLVDGKPARYTDPIILVGAQEHYE 177
Query: 249 PVCR 252
P CR
Sbjct: 178 PRCR 181
>gi|206901092|ref|YP_002250518.1| thymidine kinase [Dictyoglomus thermophilum H-6-12]
gi|238056554|sp|B5YDB0.1|KITH_DICT6 RecName: Full=Thymidine kinase
gi|206740195|gb|ACI19253.1| thymidine kinase [Dictyoglomus thermophilum H-6-12]
Length = 198
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
++ PSG I VI G M++GK+ L+RR++ + V V K + D RY D + +H G+K
Sbjct: 4 LNGPSGWIEVICGGMYSGKSEELIRRVRRAQIAKQKVQVFKHSLDIRYDKDYVASHTGLK 63
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ +++ + + D V+ I+E QFF+ + C+ AD GK VIVAGLD
Sbjct: 64 IEAIPVSSSADIERLVEDDT----QVVAIEEGQFFDMGIVKVCQRLADK-GKRVIVAGLD 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
D+ FG + ++ +A+ V KL A C CG A T R + + L+G +
Sbjct: 119 QDFRGEPFGPMPYLMAVAEYVDKLHAICMKCGNVASRTQRIIDGKPAYYDDPIILVGAFE 178
Query: 246 IYMPVCRQHYV 256
Y CR ++
Sbjct: 179 TYEARCRNCHI 189
>gi|448612042|ref|ZP_21662472.1| thymidine kinase [Haloferax mucosum ATCC BAA-1512]
gi|445742803|gb|ELZ94297.1| thymidine kinase [Haloferax mucosum ATCC BAA-1512]
Length = 195
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GKT LLRR++ G+ ++V K D RYG ++ TH G
Sbjct: 7 SGWVEVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + + DV+ IDEA FF +L D C + A DGK V+V+G D +
Sbjct: 67 VVPSEGEGVWQI-VEELNGEDVVAIDEANFFSAELVDVCEQLA-ADGKRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F V ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 AEPFDPVPQLMALAEYVDKLQAICTICGEPATRNQRLIDGKPAHVDDPTILVGAEESYEA 184
Query: 250 VCR 252
CR
Sbjct: 185 RCR 187
>gi|215275158|sp|P0C8I4.1|KITH_ASFM2 RecName: Full=Thymidine kinase; Short=TDK
gi|33324240|gb|AAQ07929.1| truncated thymidine kinase [African swine fever virus]
Length = 188
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRD--KTIKTHSGIQLQSKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S Q + + + IDEA FF+DL CR AD + K +I+AGL+ + ++
Sbjct: 68 CEIIES-TQLSDVGSLTDIHAVVIDEAHFFDDLIK-CRAWADEE-KIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P + + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFQPIVHIFPYCSWIKYIGRTCMKCNRHNACFNVRKNADKTLILAGGSELYVTCCNN 181
>gi|448466146|ref|ZP_21599023.1| thymidine kinase [Halorubrum kocurii JCM 14978]
gi|445814450|gb|EMA64413.1| thymidine kinase [Halorubrum kocurii JCM 14978]
Length = 208
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV K D RYG +I TH+G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGTHNGRQWDAT 66
Query: 137 ALTTLSSFRQK-FGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDY 194
+ D Y + V+ IDEA FF D L + C AD+ G VIV+G D +
Sbjct: 67 VVENEGDGPLAILDDDPYPE--VVAIDEANFFSDALVEVCNALADN-GTRVIVSGTDQTF 123
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYM 248
F + +++ A+ V KL A C CG+ A R E E T L+G + Y
Sbjct: 124 RGEPFEPLPELMATAEYVDKLQAICSQCGEPASRNQRLIEGEPAHTEDPTILVGAEESYE 183
Query: 249 PVCRQHYV 256
CR +V
Sbjct: 184 ARCRDCHV 191
>gi|433436642|ref|ZP_20408227.1| thymidine kinase [Haloferax sp. BAB2207]
gi|448565118|ref|ZP_21636089.1| thymidine kinase [Haloferax prahovense DSM 18310]
gi|448568101|ref|ZP_21637709.1| thymidine kinase [Haloferax lucentense DSM 14919]
gi|448583066|ref|ZP_21646535.1| thymidine kinase [Haloferax gibbonsii ATCC 33959]
gi|448601026|ref|ZP_21656309.1| thymidine kinase [Haloferax alexandrinus JCM 10717]
gi|448622780|ref|ZP_21669429.1| thymidine kinase [Haloferax denitrificans ATCC 35960]
gi|432191296|gb|ELK48261.1| thymidine kinase [Haloferax sp. BAB2207]
gi|445715777|gb|ELZ67530.1| thymidine kinase [Haloferax prahovense DSM 18310]
gi|445727563|gb|ELZ79174.1| thymidine kinase [Haloferax lucentense DSM 14919]
gi|445730023|gb|ELZ81615.1| thymidine kinase [Haloferax gibbonsii ATCC 33959]
gi|445734629|gb|ELZ86187.1| thymidine kinase [Haloferax alexandrinus JCM 10717]
gi|445753288|gb|EMA04705.1| thymidine kinase [Haloferax denitrificans ATCC 35960]
Length = 195
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G+ ++V K D RYG ++ +H G
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + + DV+ IDEA FF +L D C EA DGK V+V+G D +
Sbjct: 67 VVPSEGEGVWQIAEELNGE-DVVAIDEANFFSAELVDVC-EALAADGKRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 AEPFDPLPQLMALAEYVDKLQAICTVCGEPATRNQRLIDGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|357462433|ref|XP_003601498.1| Thymidine kinase [Medicago truncatula]
gi|355490546|gb|AES71749.1| Thymidine kinase [Medicago truncatula]
Length = 109
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
RR+FG V II ADS+TKLTARCE C FTLRKT E +TELIGG+D+YMPVC HY
Sbjct: 8 RRTFGFVPHIIATADSITKLTARCELC----IFTLRKTGEKQTELIGGADLYMPVCSHHY 63
Query: 256 VSGQV 260
V+GQV
Sbjct: 64 VNGQV 68
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKR 225
RSFGSV+ IIP+A++ TKLTARCE C R
Sbjct: 69 RSFGSVLHIIPIAETATKLTARCELCSVR 97
>gi|33324266|gb|AAQ07942.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRD--KTIKTHSGIQLRSKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDV--IGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S + SD D+ + IDEA FF+DL CR AD + K +I+AGL+ +
Sbjct: 68 CKIIESTQL---SDVGSLTDIHAVVIDEAHFFDDLIK-CRTWADEE-KIIILAGLNASFE 122
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
++ F ++ I P V + C C + A F +RK + L GGS++Y+ C
Sbjct: 123 QKMFPPIVRIFPYCSWVKYIGRTCMKCNRHNACFNVRKNADKTLILAGGSELYVTCCNN 181
>gi|390942223|ref|YP_006405984.1| thymidine kinase [Belliella baltica DSM 15883]
gi|390415651|gb|AFL83229.1| thymidine kinase [Belliella baltica DSM 15883]
Length = 194
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 58 PLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKD 117
P S++N+ G I VI G MF+GKT L+RR+ + V + K + D
Sbjct: 5 PFISIKNK--------KDKKGHIEVICGSMFSGKTEELIRRLNRALIAKQKVEIFKPSID 56
Query: 118 TRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREA 177
RY +V+H+ + +T +F + A D DV+GIDE QFF++
Sbjct: 57 KRYHELDVVSHNENAIR----STPVNFAEDILLLAGD-CDVVGIDEVQFFDNHIVHIANV 111
Query: 178 ADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETK 237
+ GK VI+AGLD D+ ++F + ++ +A+ VTK+ A C CG A ++ R ++
Sbjct: 112 LANGGKRVILAGLDMDFEGKAFEPMPQLLAIAEYVTKVHAICMKCGDLASYSYRLSDTKD 171
Query: 238 TELIGGSDIYMPVCRQ 253
++G D Y CR+
Sbjct: 172 KVMLGEKDSYEARCRK 187
>gi|269121661|ref|YP_003309838.1| thymidine kinase [Sebaldella termitidis ATCC 33386]
gi|268615539|gb|ACZ09907.1| Thymidine kinase [Sebaldella termitidis ATCC 33386]
Length = 357
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLD--SIVTHDG 130
+S+ SG + V+ G MF+GK+ L+RR++ + AV K D RY D +IV+H
Sbjct: 5 LSNNSGILEVVTGSMFSGKSEELIRRLRRAKYAKQKTAVFKPAIDKRYEGDDVNIVSHSQ 64
Query: 131 VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAG 189
K+ +S + ++ + VIGIDEAQFF ED+ FC + GK V+VAG
Sbjct: 65 NKIEAILAKDVSVMEEYLENNP--DIQVIGIDEAQFFGEDVVAFCEKCVKL-GKRVVVAG 121
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGG 243
LD ++ + + ++ AD V K A C CG A+ T R + +G
Sbjct: 122 LDMNFRGEPYEPMPRLMATADYVDKFHAICTVCGNPAYVTQRIINGEPAYYDDPVLFVGT 181
Query: 244 SDIYMPVCRQHYV 256
++ Y CR+H++
Sbjct: 182 TESYEARCRRHHI 194
>gi|329770545|ref|ZP_08261923.1| thymidine kinase [Gemella sanguinis M325]
gi|328836294|gb|EGF85963.1| thymidine kinase [Gemella sanguinis M325]
Length = 192
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I I G MF+GK+ LLRRI+ + V + K + D RY + + TH+G +
Sbjct: 8 GWIECICGSMFSGKSEELLRRIKRGVIAKQKVLLFKPSIDNRYDENRVSTHNGNSYDSIS 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S YD +IGIDE QFF+ D+ + AD DG VIVAGLD D+
Sbjct: 68 IEKSSDILNFVKDTKYD---IIGIDEIQFFDNDIVKIINKLAD-DGIRVIVAGLDMDFKA 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
F + +I+ +++ VTKL A C CGK A + R + +IG S+ Y
Sbjct: 124 EPFHPMPEIMAISEMVTKLHAVCNKCGKEASRSQRLINGKPAKYDDPVVVIGASESYEAR 183
Query: 251 CRQ 253
CR
Sbjct: 184 CRH 186
>gi|108805615|ref|YP_645552.1| thymidine kinase [Rubrobacter xylanophilus DSM 9941]
gi|108766858|gb|ABG05740.1| Thymidine kinase [Rubrobacter xylanophilus DSM 9941]
Length = 202
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + VI G MF+GKT L+RR++ R+V V K DTR +I +H+G+
Sbjct: 19 AGSLTVITGSMFSGKTEELIRRVRRALYARRSVQVFKHALDTRAEGTAIRSHNGLLHEAA 78
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
A+ + + + D++ I+E QFF+ + + CR AD G VI AGLD D+
Sbjct: 79 AVASSEELQARV----EPATDLVAIEEVQFFDGRIVEVCRNLAD-GGYDVIAAGLDMDFR 133
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
R FG V ++ AD V KL A C CG+ A + R + T ++G + Y
Sbjct: 134 GRPFGPVPALLAEADEVVKLRAICARCGREASRSQRLIDGRPAPATAPTIMVGAEESYEA 193
Query: 250 VCRQ 253
CR
Sbjct: 194 RCRH 197
>gi|338536288|ref|YP_004669622.1| thymidine kinase [Myxococcus fulvus HW-1]
gi|337262384|gb|AEI68544.1| thymidine kinase [Myxococcus fulvus HW-1]
Length = 182
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR+Q + V V K D RY ++V+H +K+ A+
Sbjct: 1 MFSGKTEELIRRVQRAVYGKQKVQVFKPRLDNRYDESAVVSHSQLKVMSTAIERAEEIFY 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+ D V+GIDE QFF EA + G VI AGLD DY R F + ++
Sbjct: 61 RLAPDT----QVVGIDEVQFFGSEVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLM 116
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
+++ VTK A C CG A + R + ++G + Y P CR+ +V+
Sbjct: 117 AVSEYVTKELAICVVCGNPANRSQRIVSSGERVVVGAAGAYEPRCRKCHVA 167
>gi|302875891|ref|YP_003844524.1| thymidine kinase [Clostridium cellulovorans 743B]
gi|307689324|ref|ZP_07631770.1| thymidine kinase [Clostridium cellulovorans 743B]
gi|302578748|gb|ADL52760.1| Thymidine kinase [Clostridium cellulovorans 743B]
Length = 197
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ GPM++GK+ L+RR++ V V K D RY +++V+H G ++ A
Sbjct: 8 GWIEVVCGPMYSGKSEELIRRVKRARIGNLKVQVFKPAIDNRYDDEAVVSHCGERVDGVA 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+++ + D V+ IDE QFF+D L D E A ++ K +I AGLD D+
Sbjct: 68 VSSSREILELLEDDT----KVVAIDEVQFFDDELVDVVSELA-NEHKRIICAGLDTDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
FG + ++ +A+ V K+TA C CG A T R E K LIG ++ Y
Sbjct: 123 EPFGIMPKLMAIAEFVDKITAICMKCGNPATRTQRLINGMPAKYEDKIVLIGATESYEAR 182
Query: 251 CRQ 253
CR
Sbjct: 183 CRN 185
>gi|313888493|ref|ZP_07822160.1| thymidine kinase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845522|gb|EFR32916.1| thymidine kinase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 200
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + + G MF+GKT++L + ++ + V K D RY + IVTHD + L
Sbjct: 6 GRMILHTGSMFSGKTSSLEKDLKRFSIANYKVVAFKPLMDKRYAKNEIVTHDKISLDAVE 65
Query: 138 LTTLS---SFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADH---DGKTVIVAGLD 191
+ +++ ++ +K+ VIGIDE QF D + E + G T+++AGLD
Sbjct: 66 VESINEILAYVEKYSPQ------VIGIDEVQFLCDTPELVLEDLEKILDMGITIVLAGLD 119
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
DY+ + F V +++P D + K A C+ CG A+ + RK + K +G + Y P+C
Sbjct: 120 MDYMAQPFEIVKELMPKVDYLNKHHAVCKKCGTDAWVSHRKIKSDKRVELGAVEEYEPLC 179
Query: 252 RQHY 255
R+ Y
Sbjct: 180 RRCY 183
>gi|60390095|sp|Q898Y8.2|KITH_CLOTE RecName: Full=Thymidine kinase
Length = 192
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPM++GK+ L+RR++ + V V K D RY + +V+H G K
Sbjct: 8 GWIEVITGPMYSGKSEELIRRVRRVKIAKQKVQVFKPEIDNRYSNEDVVSHCGDKEGAVP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + D +V+ IDEAQFF+ + + + A+ +GK VI AGLD D+
Sbjct: 68 IKSSEDILKLIKEDT----EVVAIDEAQFFDKGILEVVNKIAN-EGKRVICAGLDQDFKG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG + DII +A+ V K+ A C CG A T R + L+G + Y
Sbjct: 123 EPFGYMPDIIAVAEFVHKVQAVCMICGNPATRTQRLINGKPAKYDDPVVLVGAKESYEAR 182
Query: 251 CRQHYV 256
CR+ ++
Sbjct: 183 CRKCHI 188
>gi|215275157|sp|P0C8I3.1|KITH_ASFK5 RecName: Full=Thymidine kinase; Short=TDK
gi|33324242|gb|AAQ07930.1| truncated thymidine kinase [African swine fever virus]
gi|33324246|gb|AAQ07932.1| truncated thymidine kinase [African swine fever virus]
gi|33324248|gb|AAQ07933.1| truncated thymidine kinase [African swine fever virus]
Length = 185
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCINMLERLEKKVVFIKSTKNTRD--KTIQTHSGIQLRPNQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S + D V+ IDEA FF+DL CR AD + K +I+AGL+ + ++
Sbjct: 68 CKIIESAQLSDVGSLTDTHAVV-IDEAHFFDDLIR-CRTWAD-EKKIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P + V + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFQPIVRIFPYCNWVKYIGRTCMKCNRHNACFNVRKNADKTLILAGGSELYITCCNN 181
>gi|33324244|gb|AAQ07931.1| truncated thymidine kinase [African swine fever virus]
Length = 185
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCINMLERLEKKVVFIKSTKNTRD--KTIQTHSGIQLRPNQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S + D V+ IDEA FF+DL CR AD + K +I+AGL+ + ++
Sbjct: 68 CKIIESTQLSDVGSLTDTHAVV-IDEAHFFDDLIR-CRTWAD-EKKIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P + V + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFQPIVRIFPYCNWVKYIGRTCMKCNRHNACFNVRKNADKTLILAGGSELYITCCNN 181
>gi|335039075|ref|ZP_08532261.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334181043|gb|EGL83622.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 186
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I I G MFAGKTT L+RR++ G+NV K D RY IV+H+G L
Sbjct: 2 GHIETIYGCMFAGKTTELIRRVE-----GKNVLAFKPKLDNRYSTSHIVSHNGETLKAVL 56
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLY-DFCREAADHDGKTVIVAGLDGDYLR 196
+ T A + I IDE FF+ + CR+ A+ G +I AGLD D+
Sbjct: 57 IDTAEEILDHVNGKA----EYIAIDEVHFFDIMIGSVCRKLANQ-GYRIICAGLDLDFRG 111
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
F + ++ ++ SVT L A+C CGK A T R + ++G D+Y P
Sbjct: 112 EPFPPMPYLVAISHSVTHLRAKCVCCGKPATRTQRLIDGQPAHVDDPVIMVGADDLYEPR 171
Query: 251 CRQ-HYVSG 258
C H V G
Sbjct: 172 CVDCHEVRG 180
>gi|441643977|ref|XP_004092998.1| PREDICTED: LOW QUALITY PROTEIN: thymidine kinase, cytosolic
[Nomascus leucogenys]
Length = 335
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 167 FEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRA 226
F D+ +FC EA + GKTVIVA LDG + R+ FG++++++PLA+SV KLTA C C + A
Sbjct: 203 FPDIVEFC-EAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREA 261
Query: 227 FFTLRKTEETKTELIGGSDIYMPVCRQHY---VSGQ 259
+T R E + E+IGG+D Y VCR Y SGQ
Sbjct: 262 AYTKRLGTEKEVEVIGGADKYHSVCRLCYFKKTSGQ 297
>gi|150021091|ref|YP_001306445.1| thymidine kinase [Thermosipho melanesiensis BI429]
gi|149793612|gb|ABR31060.1| Thymidine kinase [Thermosipho melanesiensis BI429]
Length = 187
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G+I VI GPM++GKTT LL ++ + V K + D RYG D + TH G K+
Sbjct: 3 GKITVITGPMYSGKTTELLSFVEIYNIGRKKTIVFKPSIDNRYGEDIVSTHTGFKVSAIR 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ S ++ D +D + +DE QFF+ +L D +E G V AGLD YL
Sbjct: 63 I----SKSREILDYIRDSIDAVFVDEIQFFDLELVDVVKELV-FKGIDVYCAGLDISYLE 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F + ++ +AD V K A CE CG+ RA ++ + +GG + Y+ +CR+
Sbjct: 118 NPFETTAKLLAMADEVIKKKAVCEKCGEHRATYSYKIIPNGGEIDVGGKEKYIALCRK 175
>gi|215275160|sp|P0C8I6.1|KITH_ASFWA RecName: Full=Thymidine kinase; Short=TDK
gi|33324272|gb|AAQ07945.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLEHLEKKVVFIKSTKNTRD--KTIKTHSGIQLRPKH 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S Q + + + IDEA FF+DL CR AD + K +I+AGL+ + ++
Sbjct: 68 CKIIES-TQLSDVGSLTDIHAVVIDEAHFFDDLIK-CRTWADEE-KIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P V + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFPPIVRIFPYCSWVKYIGRTCMKCNRHNACFNVRKNADKTLILAGGSELYVTCCNN 181
>gi|320160820|ref|YP_004174044.1| thymidine kinase [Anaerolinea thermophila UNI-1]
gi|319994673|dbj|BAJ63444.1| thymidine kinase [Anaerolinea thermophila UNI-1]
Length = 190
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT L+RR++ + V V K D RY ++ + +H G +
Sbjct: 5 TGSIEVITGSMFSGKTDELIRRLRRARIARQKVQVFKPIIDDRYSVEKVTSHAGNEFEAY 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++ QK +A V+ IDEAQFF++ +A G VIVAGLD D+
Sbjct: 65 PISRSEEIWQKLDPEA----SVVAIDEAQFFDEGIVGVVQALASKGVRVIVAGLDMDFRG 120
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG + ++ +A+ V KL A C CG+ A T R + ++G S++Y
Sbjct: 121 EPFGVMPVLMAIAERVDKLQAICMVCGEPASRTQRLVNGKPAKYSDPVVIVGASELYEAR 180
Query: 251 CRQHY 255
CRQH+
Sbjct: 181 CRQHH 185
>gi|251797999|ref|YP_003012730.1| thymidine kinase [Paenibacillus sp. JDR-2]
gi|247545625|gb|ACT02644.1| Thymidine kinase [Paenibacillus sp. JDR-2]
Length = 212
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGR-NVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VI+GPMF+ K+ L+RR Q + GR V K +D R+ + IV+ G +LP
Sbjct: 4 GFITVIIGPMFSEKSGELIRRCQKLMKYGRKQVRAYKPAEDDRFSNEEIVSRIGYRLPAT 63
Query: 137 ALTTL--SSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
++ +S ++ ++ D DV+ DEA FF E + GK +IV GL+ DY
Sbjct: 64 SVPRALPASSVEQILLESKD-ADVVAFDEASFFGKPIIALVEELAYQGKHIIVDGLNMDY 122
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTE-----LIGGSDIYM 248
+ FG + ++ +AD + KLT+ C CG A FT R + LIG ++ Y
Sbjct: 123 RGKEFGYIGGLLAIADEIVKLTSFCAVCGDANATFTQRIVNGKPAKLGPVFLIGDTESYE 182
Query: 249 PVCRQ-----HYVSGQVVVEAARIVLESQ 272
P CR H V+G E + SQ
Sbjct: 183 PRCRSCFVPPHKVTGDDAEELTDTITASQ 211
>gi|159899186|ref|YP_001545433.1| thymidine kinase [Herpetosiphon aurantiacus DSM 785]
gi|159892225|gb|ABX05305.1| Thymidine kinase [Herpetosiphon aurantiacus DSM 785]
Length = 202
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I V+ G MF+GKT L+RR++ + + V K DTRY + + +H+GV++
Sbjct: 4 GGIEVVCGSMFSGKTEELIRRVKRAQIARQKIQVFKPAIDTRYSDEEVASHNGVRV---- 59
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
L T + + V+ IDE QFF+ + D C A H G VIVAGLD D+
Sbjct: 60 LATPVQTAADIAAAIALETTVVAIDEVQFFDPAVIDLCDLLA-HRGVRVIVAGLDQDFRG 118
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG + ++ A+ VTKL A C CG+ A T R + + L+G + Y
Sbjct: 119 EPFGPLPILLAKAEEVTKLQAICVICGQAASRTQRLINGMPASYDDPIILVGAQEAYEAR 178
Query: 251 CRQ 253
CR+
Sbjct: 179 CRR 181
>gi|218295560|ref|ZP_03496373.1| Thymidine kinase [Thermus aquaticus Y51MC23]
gi|218244192|gb|EED10718.1| Thymidine kinase [Thermus aquaticus Y51MC23]
Length = 192
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I VIVGPMF+GK+ L+RR++ ++V V K D RY +V+HDG ++
Sbjct: 8 QGWIEVIVGPMFSGKSEELIRRVRRALIARQSVLVFKPRLDNRYHESHVVSHDGKQV--A 65
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ S+ + D Q V+ +DE QF + E G VI+AGLD D+
Sbjct: 66 AIPVESAAEMEAHLDPLPQ--VVAVDEVQFLDRGLLPLVERLAAQGVRVILAGLDLDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG + +++ A+ V KL+A C CG A T R L+G + Y P
Sbjct: 124 EPFGLMPELLARAEFVEKLSAICPRCGAPATRTQRLVNGKPARYSDPVILVGAEEHYEPR 183
Query: 251 CR 252
CR
Sbjct: 184 CR 185
>gi|28210060|ref|NP_781004.1| thymidine kinase [Clostridium tetani E88]
gi|28202495|gb|AAO34941.1| thymidine kinase [Clostridium tetani E88]
Length = 203
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPM++GK+ L+RR++ + V V K D RY + +V+H G K
Sbjct: 19 GWIEVITGPMYSGKSEELIRRVRRVKIAKQKVQVFKPEIDNRYSNEDVVSHCGDKEGAVP 78
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + D +V+ IDEAQFF+ + + + A+ +GK VI AGLD D+
Sbjct: 79 IKSSEDILKLIKEDT----EVVAIDEAQFFDKGILEVVNKIAN-EGKRVICAGLDQDFKG 133
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG + DII +A+ V K+ A C CG A T R + L+G + Y
Sbjct: 134 EPFGYMPDIIAVAEFVHKVQAVCMICGNPATRTQRLINGKPAKYDDPVVLVGAKESYEAR 193
Query: 251 CRQHYV 256
CR+ ++
Sbjct: 194 CRKCHI 199
>gi|269957052|ref|YP_003326841.1| Thymidine kinase [Xylanimonas cellulosilytica DSM 15894]
gi|269305733|gb|ACZ31283.1| Thymidine kinase [Xylanimonas cellulosilytica DSM 15894]
Length = 196
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G + V+ GPMFAGK+ L+RR++ GR V V+ D R G I +H G+++P
Sbjct: 15 AGRVEVVAGPMFAGKSEELVRRVRRARIAGRGVVVVNHALDVRAGGGKIASHSGLEIP-- 72
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ +S + +++ IDEAQFF DL D AD DG V+VAGL +
Sbjct: 73 --SATASEAAEIPGLVTPGTELVAIDEAQFFGPDLVDVVLRLAD-DGLVVVVAGLCVTFD 129
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYMP 249
R F + ++ +A++V KLTA C CG+ A + +R + +GG + Y
Sbjct: 130 GRPFEPLPALMAVAENVVKLTAVCTICGRDAAYHVRLLPDDADATAPVPAHVGGQESYQA 189
Query: 250 VCRQH 254
CRQH
Sbjct: 190 RCRQH 194
>gi|320450508|ref|YP_004202604.1| thymidine kinase [Thermus scotoductus SA-01]
gi|320150677|gb|ADW22055.1| thymidine kinase [Thermus scotoductus SA-01]
Length = 235
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 51 SMVSPRPPLFS----LQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKG 106
S PRPP + R V G I VI GPMF+GK+ L+RR++
Sbjct: 21 SEPGPRPPFWRKYTLCPGRIWARMPPVLHRQGWIEVITGPMFSGKSEELIRRVKRALIAR 80
Query: 107 RNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAY--DQVDVIGIDEA 164
+ V V K DTRY +V+HDG ++ + +AY V+ +DE
Sbjct: 81 QRVLVFKPRLDTRYHESQVVSHDGQRVEAIPVGEAREI------EAYLSPLPQVVAVDEV 134
Query: 165 QFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGK 224
QF + E G VI+AGLD D+ FG + +++ A+ V KLTA C CG
Sbjct: 135 QFLDAGLLSLAEDLARQGVRVILAGLDLDFRGEPFGLMPELLARAEFVEKLTAICAQCGA 194
Query: 225 RAFFTLRKTEETKTE------LIGGSDIYMPVCR 252
A T R L+G + Y P CR
Sbjct: 195 PATRTQRLVNGKPARYTDPVILVGAKEHYEPRCR 228
>gi|294155796|ref|YP_003560180.1| thymidine kinase [Mycoplasma crocodyli MP145]
gi|291600409|gb|ADE19905.1| thymidine kinase [Mycoplasma crocodyli MP145]
Length = 187
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ LL+RI + +IK DTR+ SIV+ +G ++ +
Sbjct: 8 GTIEVITGPMFSGKSEELLKRINILSIAQIKTLIIKPAFDTRFKETSIVSRNGKEIKAIS 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ SS ++Y V IDE FF E + + +E G +IV+GLD D++
Sbjct: 68 VND-SSEILSLIDNSYKAV---AIDELNFFDEGIVEVIQELRTR-GIRIIVSGLDMDFMA 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R FG V I+ L+D + KL A C C A FT RK + + ++G S+ Y C Y
Sbjct: 123 RPFGVVPIIMALSDEILKLKAVCFKCHSSASFTYRKIKSNELNVLGDSE-YEARCWHCYK 181
Query: 257 SG 258
G
Sbjct: 182 QG 183
>gi|339321279|ref|YP_004683801.1| thymidine kinase [Mycoplasma bovis Hubei-1]
gi|338227404|gb|AEI90466.1| thymidine kinase [Mycoplasma bovis Hubei-1]
Length = 190
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 7/188 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
+ S G++ VI GPMF+GKT LL+RI G N VIK DTR+ D IV+ +
Sbjct: 3 LKSGLGQLEVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSKDEIVSRTRAR 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + + D + IDE F ED+ E G VI +GLD
Sbjct: 63 HKAINVANSKEILKYWNPDYM----CVAIDEVNFMDEDILTVIDELI-VKGVRVICSGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
D+ RR F + ++ AD++ KL A C C A F+ RK + + L+G S+ Y C
Sbjct: 118 MDFKRRPFDVMARVLASADNILKLKAVCLECKSDAGFSFRKVKSDELNLLGDSE-YEARC 176
Query: 252 RQHYVSGQ 259
R ++ G+
Sbjct: 177 RVCHIKGE 184
>gi|229917065|ref|YP_002885711.1| thymidine kinase [Exiguobacterium sp. AT1b]
gi|229468494|gb|ACQ70266.1| Thymidine kinase [Exiguobacterium sp. AT1b]
Length = 203
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V++ G I VI G MF+GK+ L+RR++ V V K D RY +++V+H G
Sbjct: 4 VTNRYGWIEVICGSMFSGKSEELIRRVRRAHYGKIPVQVFKPAIDDRYHEENVVSHTGNS 63
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ A+ SS Q+ ++ VI IDE QFF E + D + A+ D K VI AGLD
Sbjct: 64 V--VAVPIASS--QELYDAVREETQVIAIDEVQFFDEGIVDVIEQLANED-KRVICAGLD 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
D+ F + +++ A+ VTKL A C CG A T R + E L+G S+
Sbjct: 119 MDFRGEPFTMMPELLSRAEFVTKLQAICLSCGAPASRTQRLIDGQPARYEDPVILVGASE 178
Query: 246 IYMPVCRQ 253
Y P CR
Sbjct: 179 SYEPRCRH 186
>gi|156741068|ref|YP_001431197.1| thymidine kinase [Roseiflexus castenholzii DSM 13941]
gi|189028751|sp|A7NI79.1|KITH_ROSCS RecName: Full=Thymidine kinase
gi|156232396|gb|ABU57179.1| Thymidine kinase [Roseiflexus castenholzii DSM 13941]
Length = 194
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 15/191 (7%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
S G I VI G MF+GKT L+RR+ + + +DTRY L S+V+H+G+ +
Sbjct: 5 SSGGRIEVICGCMFSGKTEELIRRLNHVRLARQRLIAFTPRRDTRYRLGSLVSHNGLSVE 64
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYD----FCREAADHDGKTVIVAGL 190
+ ++ +D + V+ +DE +D D C++ AD G VIVAGL
Sbjct: 65 ARVIDSIRDTPAHLNTD----IHVVAVDELHLLDDPPDAAREVCQDLADR-GLRVIVAGL 119
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
D D+ + F ++ ++ +A+ V KL A C CG A + R + + T ++GG
Sbjct: 120 DQDFRAQPFPAMAQLMAVAEQVDKLYAICVRCGAYATRSQRLIDGKPAPADAPTIVVGGQ 179
Query: 245 DIYMPVCRQHY 255
++Y CR Y
Sbjct: 180 ELYEARCRACY 190
>gi|405354026|ref|ZP_11023435.1| Thymidine kinase [Chondromyces apiculatus DSM 436]
gi|397092717|gb|EJJ23466.1| Thymidine kinase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 182
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RRIQ + V V K D RY ++V+H K+ A+
Sbjct: 1 MFSGKTEELIRRIQRAVYGKQKVQVFKPRIDNRYDDSAVVSHSQQKVLSTAIERAEEIFY 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
+ D V+GIDE QFF EA + G VI AGLD DY R F + ++
Sbjct: 61 RLAPDT----QVVGIDEVQFFGSEVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLM 116
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
+++ VTK A C CG A + R + ++G + Y P CR+ +V+
Sbjct: 117 AVSEYVTKELAICVVCGNPANRSQRIVSSGERVVVGAAGAYEPRCRKCHVA 167
>gi|404448487|ref|ZP_11013480.1| thymidine kinase [Indibacter alkaliphilus LW1]
gi|403766108|gb|EJZ26983.1| thymidine kinase [Indibacter alkaliphilus LW1]
Length = 196
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR+ + V + K + D RY +V+H+
Sbjct: 17 GHIEVICGSMFSGKTEELIRRLNRALIARQKVEIFKPSIDKRYHEFDVVSHNE------- 69
Query: 138 LTTLSSFRQKFGSDAY---DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
T + S +F D DV+GIDE QFF++ + GK VI+AGLD D+
Sbjct: 70 -TAIRSTPVQFAEDIILLAGNCDVVGIDEVQFFDNRVVHVATVLANAGKRVILAGLDMDF 128
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F + ++ +A+ VTK+ A C CG A ++ R +E + ++G + Y CR+
Sbjct: 129 EGNPFEPMPQLLAVAEYVTKVHAICMKCGDLASYSFRLSETREKVVLGEKESYEARCRK 187
>gi|448618508|ref|ZP_21666745.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
gi|445746879|gb|ELZ98337.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
Length = 195
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GKT LLRR++ G+ ++V K D RYG ++ TH G
Sbjct: 7 SGWVEVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + + DV+ IDEA FF +L C + A DGK V+V+G D +
Sbjct: 67 VVPSEGDGVWQI-VEELNGEDVVAIDEANFFSAELVGVCEQLA-ADGKRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F V ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 AEPFNPVPQLMALAEYVDKLQAICTICGEPATRNQRLIDGEPAHMDDPTILVGAEESYEA 184
Query: 250 VCR 252
CR
Sbjct: 185 RCR 187
>gi|448498906|ref|ZP_21611087.1| thymidine kinase [Halorubrum coriense DSM 10284]
gi|445697920|gb|ELZ49976.1| thymidine kinase [Halorubrum coriense DSM 10284]
Length = 213
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV K D RYG +I +H G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHTGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ D D +V+ IDEA FF E L + C AD G VIV+G D +
Sbjct: 67 VVDNEGDGPLDILDD--DPAEVVAIDEANFFSEALIEVCNTLADR-GSRVIVSGTDQTFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + I+ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 GEPFEPLPRIMATAEYVDKLQAICSVCGEPASRNQRLIEGEPAHTDDPTILVGAEESYEA 183
Query: 250 VCRQHYV 256
CR +V
Sbjct: 184 RCRDCHV 190
>gi|390443545|ref|ZP_10231335.1| thymidine kinase [Nitritalea halalkaliphila LW7]
gi|389666426|gb|EIM77875.1| thymidine kinase [Nitritalea halalkaliphila LW7]
Length = 195
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
I VI G MF+GKT L+RR+ + V + K DTRY +V+H+ T
Sbjct: 19 IEVICGSMFSGKTEELIRRLNRALIARQQVEIFKPALDTRYHAYDVVSHNE--------T 70
Query: 140 TLSSFRQKFGSDAY---DQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S +F D DV+GIDE QF + + + A+ GK VI+AGLD D+
Sbjct: 71 AIRSTPIQFAQDILLLAGNCDVVGIDEVQFLDAGIVEVAIRLANQ-GKRVILAGLDMDFE 129
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R F + ++ +A+ VTK+ A C CG A ++ R E + ++G D Y CR+ +
Sbjct: 130 GRPFEPMPQLLAVAEYVTKVHAICMKCGDLASYSYRLNEAKEKVVLGEKDSYEARCRKCF 189
Query: 256 VSG 258
G
Sbjct: 190 YEG 192
>gi|293363771|ref|ZP_06610512.1| thymidine kinase [Mycoplasma alligatoris A21JP2]
gi|292552637|gb|EFF41406.1| thymidine kinase [Mycoplasma alligatoris A21JP2]
Length = 187
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ LL+RI + +IK DTR+ SIV+ +G ++ A
Sbjct: 8 GTIEVITGPMFSGKSEELLKRINILSIAKIKTLIIKPAFDTRFKATSIVSRNGSEIEAIA 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S + + Y V IDE FF++ + G +IV+GLD D++
Sbjct: 68 VKDSSEILKAI-DNTYKAV---AIDELNFFDEGIIQVVQELRTRGIRIIVSGLDMDFMAL 123
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FG V I+ L+D V KL A C C A FT RK + + L+G S+ Y C +
Sbjct: 124 PFGVVPAIMALSDEVLKLKAVCFKCHSSAAFTYRKVKSNEQNLLGDSE-YEARCWHCHQK 182
Query: 258 G 258
G
Sbjct: 183 G 183
>gi|332800124|ref|YP_004461623.1| thymidine kinase [Tepidanaerobacter acetatoxydans Re1]
gi|332697859|gb|AEE92316.1| Thymidine kinase [Tepidanaerobacter acetatoxydans Re1]
Length = 187
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 14/189 (7%)
Query: 78 GEIHVIV-GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPC- 135
G I VI G M+AGKT ++RI + + ++K D RYG +++H+G +
Sbjct: 7 GWIEVIASGAMYAGKTREFIKRIDELKWAKKKILIVKPMLDDRYGESCVMSHNGDNVTAI 66
Query: 136 ---CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLD 191
C L L ++ D DV+ IDEAQFF+ + ++ D G V++ GL+
Sbjct: 67 NIKCPLEILELIKR-------DNYDVVAIDEAQFFDKKIVQVIKDLRDS-GFLVLITGLN 118
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVC 251
+ FG + +I+ +AD +T L C CGK A TL ++ + ++GG Y P C
Sbjct: 119 TTAEGKPFGPMPEILCIADDITILYGVCAACGKPATKTLALFDKDQDIVVGGQGKYEPRC 178
Query: 252 RQHYVSGQV 260
+H+V ++
Sbjct: 179 NKHWVHNRL 187
>gi|383786661|ref|YP_005471230.1| thymidine kinase [Fervidobacterium pennivorans DSM 9078]
gi|383109508|gb|AFG35111.1| thymidine kinase [Fervidobacterium pennivorans DSM 9078]
Length = 200
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ VI GPM++GKTT LL + + + K DTRY + +VTH K+P
Sbjct: 5 GKLTVITGPMYSGKTTELLNFAEIYEIGKKKTLIFKPAIDTRYSAEDVVTHKFHKMPARV 64
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + + + S ++ D + IDE FF+ +L + ++ DG V AGLD YL
Sbjct: 65 VKDSTELFEYYNS-LIEKPDAVFIDEVHFFDVELVNITKKIT-LDGVDVYCAGLDMSYLW 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F + ++ LAD + K A CE CG+ +A + + +GG D Y+ VC+ Y
Sbjct: 123 EPFETTAKLMALADEIIKKKAVCEVCGEYKATLSYKLKNNGGVFDVGGKDKYIAVCKDCY 182
Query: 256 VS 257
S
Sbjct: 183 ES 184
>gi|432118114|gb|ELK38004.1| Thymidine kinase, cytosolic [Myotis davidii]
Length = 368
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 96 LRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQ 155
+RR+Q VIK KDTRY THD + + L Q+
Sbjct: 1 MRRVQRFQIAQYKCLVIKYAKDTRYS-SQFSTHDRNTMEALPASLLRDVAQE-----AMG 54
Query: 156 VDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKL 215
V VIGIDE QFF D+ +F EA + GKTVIVA LDG + R++FG+++ ++PLA+SV KL
Sbjct: 55 VAVIGIDEGQFFPDIVEF-SEAMANAGKTVIVAALDGTFQRKAFGTILHLVPLAESVVKL 113
Query: 216 TARCEFCGKRAFFTLR 231
A C C + A +T R
Sbjct: 114 NAVCMECFREAAYTKR 129
>gi|431796832|ref|YP_007223736.1| thymidine kinase [Echinicola vietnamensis DSM 17526]
gi|430787597|gb|AGA77726.1| thymidine kinase [Echinicola vietnamensis DSM 17526]
Length = 194
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
++ G I VI G MF+GKT L+RR+ + V + K + DTRY +V+H+
Sbjct: 11 TLKDKKGHIEVICGSMFSGKTEELIRRLNRALIAKQKVEIFKPSLDTRYHDRDVVSHNE- 69
Query: 132 KLPCCALTTLSSFRQKFGSDAY---DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
T + S +F D DV+GIDE QFF+ GK VI+A
Sbjct: 70 -------TVIRSTPVQFADDIMLLAGDCDVVGIDEVQFFDKQIVHVANKLAIAGKRVIMA 122
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
GLD D+ + F + ++ A+ VTK+ A C CG A ++ R T + ++G D Y
Sbjct: 123 GLDMDFEGKPFDPMPQLLASAEYVTKVHAICMKCGDLASYSYRLTPAKEKVVLGEKDNYE 182
Query: 249 PVCR 252
CR
Sbjct: 183 ARCR 186
>gi|359416779|ref|ZP_09209053.1| thymidine kinase [Candidatus Haloredivivus sp. G17]
gi|358032867|gb|EHK01498.1| thymidine kinase [Candidatus Haloredivivus sp. G17]
Length = 191
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
+G I VI G MF+GKT+ LL R++ G +V + K + D RYG I +H+G
Sbjct: 10 NGWIEVITGCMFSGKTSELLERVKRAELSGHDVKLYKPSVDDRYGETEIGSHNGETRKAE 69
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ +S R ++Y VIGIDEA FF E L D E AD +G VI++GLD +
Sbjct: 70 VIEDISEIR----PESY----VIGIDEANFFDEKLTDKAEELAD-EGHRVIISGLDSTFR 120
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F V +++ A+ + KL A C CG A T R + + T ++G + Y
Sbjct: 121 AEPFEPVPELMSKAEFIDKLNAVCVKCGSTANRTQRIVDGKPAHVDDPTVVVGADEKYEA 180
Query: 250 VCR 252
CR
Sbjct: 181 RCR 183
>gi|435855222|ref|YP_007316541.1| thymidine kinase [Halobacteroides halobius DSM 5150]
gi|433671633|gb|AGB42448.1| thymidine kinase [Halobacteroides halobius DSM 5150]
Length = 211
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
S +G + VI G MF+GK++ L+RR++ +++ V K + D RY + TH G K+
Sbjct: 7 SVETGWLEVITGVMFSGKSSELIRRVERAMIAEQDILVFKPSIDNRYSDTEVTTHTGNKI 66
Query: 134 PCCALTTLSSFRQKFGSDAY-DQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ +S K D +DV+ IDE QFF E+L E A G VI+AGLD
Sbjct: 67 TAEIVDNVSDINHKIKEKKETDTIDVVAIDEGQFFSEELVPLADELA-QQGLRVIIAGLD 125
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRA 226
D+ R F + +++ A+ VTKL A C C A
Sbjct: 126 TDFAGRGFKPIPELMARAEYVTKLHAVCVKCANPA 160
>gi|222479987|ref|YP_002566224.1| thymidine kinase [Halorubrum lacusprofundi ATCC 49239]
gi|222452889|gb|ACM57154.1| thymidine kinase [Halorubrum lacusprofundi ATCC 49239]
Length = 229
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV K D RYG +I +H+G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ D +V+ IDEA FF D L + C AD+ G VIV+G D +
Sbjct: 67 VVDNEGGGPLAILDDE-PFPEVVAIDEANFFSDALVEVCNALADN-GTRVIVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + +++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 125 GEPFEPLPELMATAEYVDKLQAICSQCGEPASRNQRLIEGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQ-HYVSGQVVVEAARIVLESQKV 274
CR H + EA R L ++V
Sbjct: 185 RCRDCHVLRTGERSEADRAYLNGERV 210
>gi|329766950|ref|ZP_08258478.1| thymidine kinase [Gemella haemolysans M341]
gi|328837675|gb|EGF87300.1| thymidine kinase [Gemella haemolysans M341]
Length = 192
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I I G MF+GK+ LLRRI+ + + + K + D RY + + TH+G
Sbjct: 8 GWIECICGSMFSGKSEELLRRIKRGVIAKQKILLFKPSIDNRYEENMVSTHNGNSYESVN 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ YD +IGIDE QFF E + + + AD DG VIVAGLD D+
Sbjct: 68 IDKAEQIYDYIIDKKYD---IIGIDEVQFFDEKIVEVINKLAD-DGIRVIVAGLDMDFKA 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPV 250
F + +I+ +++ VTKL A C CGK A + R + + +IG S+ Y
Sbjct: 124 EPFHPMPEIMAVSEMVTKLHAVCNKCGKEASRSQRLIDGEPARYDDPIVVIGASESYEAR 183
Query: 251 CRQ 253
CR
Sbjct: 184 CRH 186
>gi|448578564|ref|ZP_21643984.1| thymidine kinase [Haloferax larsenii JCM 13917]
gi|445725742|gb|ELZ77362.1| thymidine kinase [Haloferax larsenii JCM 13917]
Length = 195
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G+ VAV K D RYG ++ +H G
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRAEIAGQEVAVFKPELDDRYGETTVGSHVGRSWDAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + K + + DV+ IDEA FF +L C + A DGK V+V+G D +
Sbjct: 67 VVPSEGDGVWKI-HEQLNGEDVVAIDEANFFSTELVGVCEQLA-ADGKRVLVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 GEPFEPLPQLMALAEYVDKLQAICTVCGEPATRNQRLIDGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|317495272|ref|ZP_07953642.1| thymidine kinase [Gemella morbillorum M424]
gi|316914694|gb|EFV36170.1| thymidine kinase [Gemella morbillorum M424]
Length = 192
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I I G MF+GK+ LLRRI+ +NV + K + D RY + + TH+G +
Sbjct: 8 GWIECICGSMFSGKSEELLRRIKRGVIAKQNVLLFKPSIDNRYDENKVSTHNGNSYESVS 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + Y D+IGIDE QFF++ + AD G VIVAGLD D+
Sbjct: 68 IDSAEQIYDYVKDKKY---DIIGIDEIQFFDNKIVSVINTLAD-SGVRVIVAGLDMDFKA 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + +I+ +++ VTKL A C CG+ A + R E + + +IG S+ Y
Sbjct: 124 EPFQPMPEIMAISEMVTKLHAVCNKCGQEASRSQRLINGEPARFDDPIVVIGASESYEAR 183
Query: 251 CRQ 253
CR
Sbjct: 184 CRH 186
>gi|383763017|ref|YP_005441999.1| thymidine kinase [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383285|dbj|BAM00102.1| thymidine kinase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 196
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V G I +I G MF+GKT LLRRI+ + V + K D RYGL I +H+G+
Sbjct: 5 VHPSDGRIELICGSMFSGKTEELLRRIRRAEIARKKVQLFKPAIDNRYGLVRIASHNGLA 64
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + Q+ +V+ IDE QFF E + + C A+ G VIVAGLD
Sbjct: 65 REDAVVVACA---QEIVERLEPDTEVVAIDEVQFFDEAVVEVCDHLANR-GLRVIVAGLD 120
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
D+ FG + ++ LA+ V KL A C CG A T R + + L+GGS+
Sbjct: 121 QDFRGEPFGPMPRLMALAEMVDKLQAICVICGAPASRTQRLIDGKPARYDDPVILVGGSE 180
Query: 246 IYMPVCRQ-HYVSGQ 259
Y CR H V G+
Sbjct: 181 RYEARCRACHEVPGK 195
>gi|406962350|gb|EKD88745.1| hypothetical protein ACD_34C00369G0001 [uncultured bacterium]
Length = 176
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF GKT L+RR++ T + V V K D RYG++ + +H G + +
Sbjct: 1 MFCGKTDELIRRLRRATIAKQKVQVFKPVIDLRYGVEKVTSHAGSDFAATPVQKANQIIP 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
D V+GIDEAQFF+D E+ G VIVAGLD ++ FGS+ I+
Sbjct: 61 LLEPDT----TVVGIDEAQFFDDEIANVVESLAEKGIRVIVAGLDLNFKAEPFGSMPVIM 116
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPVCRQHY 255
A+ V KL A C CG+ A + R ++G S++Y CR H+
Sbjct: 117 AHAEQVLKLQAICMVCGEPASRSQRLVNGKPARYNDPIIIVGASEMYEARCRLHH 171
>gi|9628158|ref|NP_042744.1| thymidine kinase [African swine fever virus]
gi|125424|sp|P18555.1|KITH_ASFB7 RecName: Full=Thymidine kinase; Short=TDK
gi|210658|gb|AAA42737.1| thymidine kinase [African swine fever virus]
gi|780420|gb|AAA65280.1| thymidine kinase [African swine fever virus]
gi|33324250|gb|AAQ07934.1| thymidine kinase [African swine fever virus]
gi|33324252|gb|AAQ07935.1| thymidine kinase [African swine fever virus]
gi|33324254|gb|AAQ07936.1| thymidine kinase [African swine fever virus]
gi|33324256|gb|AAQ07937.1| thymidine kinase [African swine fever virus]
gi|33324260|gb|AAQ07939.1| thymidine kinase [African swine fever virus]
gi|33324262|gb|AAQ07940.1| thymidine kinase [African swine fever virus]
gi|33324274|gb|AAQ07946.1| thymidine kinase [African swine fever virus]
gi|48144466|emb|CAG33722.1| thymidine kinase [African swine fever virus]
gi|162849260|emb|CAN10149.1| Thymidine kinase [African swine fever virus Benin 97/1]
gi|162849433|emb|CAN10398.1| Thymidine kinase [African swine fever virus OURT 88/3]
gi|291289494|emb|CBH29151.1| BA71V-K196R [African swine fever virus E75]
gi|1097440|prf||2113434BA thymidine kinase
Length = 196
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRD--KTIKTHSGIQLRPKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S Q + + + +DEA FF+DL CR A+ + K +I+AGL+ + ++
Sbjct: 68 CKIIES-TQLSDVGSLTDIHAVVVDEAHFFDDLIK-CRTWAEEE-KIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P V + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFPPIVRIFPYCSWVKYIGRTCMKCNQHNACFNVRKNADKTLILAGGSELYVTCCNN 181
>gi|78042944|ref|YP_359441.1| thymidine kinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995059|gb|ABB13958.1| thymidine kinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 183
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L+RR + V D R+G IV+ G +L
Sbjct: 2 GRIEVITGPMFSGKSEELVRRALRLMYAKKKVIAFHHALDNRFGHKKIVSRSGFELES-- 59
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ +F + D D + +DEAQFF D L D C K V+V+GLD D
Sbjct: 60 -YPVQNFAFEVIWDLAKDYDAVLVDEAQFFSDELVDTCLNLRRR-SKIVVVSGLDLDVYE 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ LAD V KL A C CG+ A + R + E K +++ G Y+ +C + Y
Sbjct: 118 NPFGPMPKLLALADRVDKLKAVCFECGEEATISYRLSGE-KEQIVVGDKNYIALCYRCYY 176
Query: 257 SGQ 259
+ +
Sbjct: 177 AKK 179
>gi|39938590|ref|NP_950356.1| thymidine kinase [Onion yellows phytoplasma OY-M]
gi|60390030|sp|Q6YRB1.1|KITH_ONYPE RecName: Full=Thymidine kinase
gi|39721699|dbj|BAD04189.1| thymidine kinase [Onion yellows phytoplasma OY-M]
Length = 209
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL-DSIVTHDGVKLPC 135
G I V+ GPMFAGKT L++R Q + + K D RY + + IV+H+ +P
Sbjct: 8 QGFIEVVCGPMFAGKTEALIQRSNQALQLNKKILSFKPQIDDRYSVKEEIVSHNQNTIPA 67
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ +++V+ IDEAQF ++ + + VI++GL+ D+
Sbjct: 68 ILIDKSKDILPFITP----EINVVIIDEAQFLDNDIVAIVDYLANCNIEVIISGLELDFC 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
+ FG + ++ +AD+VTKLT+ C GK+A T R + + L+GG + + P
Sbjct: 124 GKPFGPMPYLLAIADTVTKLTSICAISGKKANRTQRLIDGKPAQSNEPVVLVGGKEYHEP 183
Query: 250 VCRQHY 255
CR+H+
Sbjct: 184 RCRKHH 189
>gi|441496863|ref|ZP_20979089.1| Thymidine kinase [Fulvivirga imtechensis AK7]
gi|441439336|gb|ELR72654.1| Thymidine kinase [Fulvivirga imtechensis AK7]
Length = 173
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR+ + V + K + D RY +V+H+ T++ S
Sbjct: 1 MFSGKTEELIRRLNRALIARQKVEIFKPSIDVRYHKSDVVSHNE--------TSIRSTPV 52
Query: 147 KFGSDAY---DQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSV 202
F +D DV+GIDEAQFF +++ + C + A+ +GK VIVAGLD D+ + FG +
Sbjct: 53 DFANDILLMAGDCDVVGIDEAQFFDQEIVNVCNKLAN-NGKRVIVAGLDMDFEGKPFGPM 111
Query: 203 IDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVSG 258
++ +A+ VTK+ A C G+ A F+ R T+E +G Y R+ + G
Sbjct: 112 PYLLAVAEFVTKVHAICANTGELASFSFRLTDEQSKVYLGEKQQYEARSRRSFFEG 167
>gi|342215606|ref|ZP_08708253.1| putative thymidine kinase [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586496|gb|EGS29896.1| putative thymidine kinase [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 190
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KLP 134
G + V G MF+GKT++L + ++ + G V K D+R G + I++HD P
Sbjct: 6 GRLIVHTGSMFSGKTSSLEKDLKRFSIAGYKVCAFKPRMDSRCGENEIMSHDQEVTHAYP 65
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF----EDLYDFCREAADHDGKTVIVAGL 190
+ L + Q+ +DV+GIDE QF + + + D G T+IVAGL
Sbjct: 66 LDNIDDLEAMVQE------KDLDVVGIDEIQFIDRDPQRVVEVLFRILDQ-GITIIVAGL 118
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPV 250
D DY + F + +++P AD V K A C CG A+ + RK+ +T ++G D Y P+
Sbjct: 119 DMDYQKVPFEIIKELMPRADYVHKHHAVCTCCGSDAWVSHRKSSKTSRVVLGAIDEYEPL 178
Query: 251 CRQHY 255
CR Y
Sbjct: 179 CRACY 183
>gi|347755361|ref|YP_004862925.1| thymidine kinase [Candidatus Chloracidobacterium thermophilum B]
gi|347587879|gb|AEP12409.1| Thymidine kinase [Candidatus Chloracidobacterium thermophilum B]
Length = 201
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+ P G I VI G MF+GKT L+ R++ + V K D RY + IV+H +++
Sbjct: 5 ARPRGWIEVIAGGMFSGKTEALITRLRRALIARQTVQAFKPRLDDRYEANFIVSHSRLRI 64
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDG 192
+ + + + V+GIDE QF L C + A +G+ VIVA LD
Sbjct: 65 ETQVVESAEDILECLRPE----TQVVGIDEGQFLGAGLVSVCHQLA-QEGRRVIVAALDL 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY F + ++ +A+ V+K A C CG A F+ R + + ++G +Y CR
Sbjct: 120 DYRGEPFEPIPHLLAMAEYVSKPQAICVVCGHPANFSQRLIADERRVVVGAEGLYEARCR 179
Query: 253 QHYV 256
+ +V
Sbjct: 180 RCFV 183
>gi|325845254|ref|ZP_08168558.1| thymidine kinase [Turicibacter sp. HGF1]
gi|325488695|gb|EGC91100.1| thymidine kinase [Turicibacter sp. HGF1]
Length = 201
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + I G M+AGKT L+RR++ R + K D RY D +V+H G+K+P
Sbjct: 7 EGWVEAICGSMYAGKTEELIRRLKRLDFARRPYCLFKPVIDNRYSEDEVVSHSGLKMPSI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ + Y + IDE QFFE+ + D AD G VIVAGLD D+
Sbjct: 67 PIEHPIQILDHITDETY----AVAIDEVQFFEENVVDVVEYLADR-GIRVIVAGLDKDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYMP 249
FG++ ++ ++ VTKLT+ C CG A + R +G + Y P
Sbjct: 122 GEPFGTMPILLTKSEFVTKLTSICSVCGAPATRSQRLINGQPASYHDPIIQVGAKEAYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|187251427|ref|YP_001875909.1| thymidine kinase [Elusimicrobium minutum Pei191]
gi|186971587|gb|ACC98572.1| Thymidine kinase [Elusimicrobium minutum Pei191]
Length = 186
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL 133
+ G I VI G MF+GK+ L+ R++ + + V S+ D RY ++I +H+ KL
Sbjct: 5 TKKQGRIEVICGCMFSGKSEELINRLRKAKIAKQKIQVFNSSLDKRYACNAIASHNKTKL 64
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDG 192
+ T S + V+ +DE FF+ L D C E GK VIV+G+D
Sbjct: 65 ESEHVNTASEILKLVKPS----TTVVAVDEGNFFDKTLVDVC-ETLAQKGKRVIVSGVDL 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
DY + F ++ ++ A+ VTK A C CG A T R + L+G +Y CR
Sbjct: 120 DYTGKPFEAMALLMAKAEFVTKNLAVCTKCGSPASRTQRIAKAKSRILVGAQGVYEARCR 179
Query: 253 QHYVSGQ 259
+ + G+
Sbjct: 180 KCFKPGK 186
>gi|33324264|gb|AAQ07941.1| thymidine kinase [African swine fever virus]
gi|303398735|emb|CBW46716.1| K196R [African swine fever virus Georgia 2007/1]
Length = 196
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRD--KTIKTHSGIQLRPKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S Q + + + +DEA FF+DL CR A+ + K +I+AGL+ + ++
Sbjct: 68 CKIIES-TQLSDVGSLTDIHAVVVDEAHFFDDLIT-CRTWAEEE-KIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P V + C C + A F +RK + L GGS++Y+ C
Sbjct: 125 MFPPIVRIFPYCSWVKYIGRTCMKCNQHNACFNVRKNADKTLILAGGSELYVTCCNN 181
>gi|327409783|ref|YP_004347203.1| thymidine kinase [Lausannevirus]
gi|326784957|gb|AEA07091.1| thymidine kinase [Lausannevirus]
Length = 186
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I GPM +GKTT L RR+ G V S +D R G TH+ +L
Sbjct: 4 SGTLEMIFGPMRSGKTTELRRRLGIFASLGFKVTCANSERDIRPG-SGFSTHNK-ELCED 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF------EDLYDFCREAADHDGKTVIVAGL 190
+ +K + + DV+GIDEAQFF ED+ + GK VI++GL
Sbjct: 62 SQNIFPQKVKKVKNIDIEGFDVVGIDEAQFFLEKTLVEDVMKIV-----NAGKVVIMSGL 116
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCG-----KRAFFTLRKTEETKTELIGGSD 245
DGD + G + +IP AD K+ A C FC KRA F+ R E + L+G +
Sbjct: 117 DGDSDQEEMGDYLKLIPKADKAEKMLAWCYFCAQGKRMKRAPFSKRLVENDEKILVG--N 174
Query: 246 IYMPVCRQ 253
+Y VCR+
Sbjct: 175 MYASVCRE 182
>gi|448474439|ref|ZP_21602298.1| thymidine kinase [Halorubrum aidingense JCM 13560]
gi|445817746|gb|EMA67615.1| thymidine kinase [Halorubrum aidingense JCM 13560]
Length = 224
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV K D RYG +I TH+G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGTHNGRQWDAR 66
Query: 137 ALTTLSSFRQK-FGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDY 194
+ D Y + V+ IDEA FF + L D C AD+ G VIV+G D +
Sbjct: 67 VVANEGDGPLAILDDDPYPE--VVAIDEANFFSNALVDVCNVLADN-GVRVIVSGTDQTF 123
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYM 248
F + ++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 RGEPFEPLPQLVATAEYVDKLQAICTQCGEPASRNQRLIEGEPAHTDDPTILVGAEESYE 183
Query: 249 PVCRQHYV 256
CR +V
Sbjct: 184 ARCRDCHV 191
>gi|448454574|ref|ZP_21594127.1| thymidine kinase [Halorubrum lipolyticum DSM 21995]
gi|445814661|gb|EMA64620.1| thymidine kinase [Halorubrum lipolyticum DSM 21995]
Length = 208
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV K D RYG +I +H+G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ D +V+ +DEA FF D L + C AD+ G VIV+G D +
Sbjct: 67 VVDNEGDGPLAILDDE-PYPEVVAVDEANFFSDALVEVCNALADN-GARVIVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + +++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 125 GEPFEPLPELMATAEYVDKLQAICSQCGEPASRNQRLIEGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQHYV 256
CR +V
Sbjct: 185 RCRDCHV 191
>gi|448440050|ref|ZP_21588298.1| thymidine kinase [Halorubrum saccharovorum DSM 1137]
gi|445690567|gb|ELZ42777.1| thymidine kinase [Halorubrum saccharovorum DSM 1137]
Length = 208
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV K D RYG +I +H+G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWDAT 66
Query: 137 ALTTLSSFRQK-FGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDY 194
+ D Y + V+ IDEA FF D L C AD+ G VIV+G D +
Sbjct: 67 VVDNEGDGPLAILDDDPYPE--VVAIDEANFFSDALVKVCNALADN-GTRVIVSGTDQTF 123
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYM 248
F + +++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 RGEPFEPLPELMATAEYVDKLQAICSQCGEPASRNQRLIEGEPAHVDDPTILVGAEESYE 183
Query: 249 PVCRQHYV 256
CR +V
Sbjct: 184 ARCRDCHV 191
>gi|448485681|ref|ZP_21606826.1| thymidine kinase [Halorubrum arcis JCM 13916]
gi|445817380|gb|EMA67254.1| thymidine kinase [Halorubrum arcis JCM 13916]
Length = 213
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV D RYG +I +H G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ D D +V+ IDEA FF E L + C AD G VIV+G D +
Sbjct: 67 VVDNEGDGPLDILDD--DPAEVVAIDEANFFSEALIEVCNALADR-GSRVIVSGTDQTFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 GEPFDPLPQLMATAEYVDKLQAICSVCGEPASRNQRLIEGEPAHIDDPTILVGAEESYEA 183
Query: 250 VCRQHYV 256
CR +V
Sbjct: 184 RCRDCHV 190
>gi|448427942|ref|ZP_21584171.1| thymidine kinase [Halorubrum terrestre JCM 10247]
gi|448453651|ref|ZP_21593994.1| thymidine kinase [Halorubrum litoreum JCM 13561]
gi|448509902|ref|ZP_21615783.1| thymidine kinase [Halorubrum distributum JCM 9100]
gi|448519401|ref|ZP_21618033.1| thymidine kinase [Halorubrum distributum JCM 10118]
gi|445677019|gb|ELZ29526.1| thymidine kinase [Halorubrum terrestre JCM 10247]
gi|445696243|gb|ELZ48334.1| thymidine kinase [Halorubrum distributum JCM 9100]
gi|445703761|gb|ELZ55683.1| thymidine kinase [Halorubrum distributum JCM 10118]
gi|445807451|gb|EMA57536.1| thymidine kinase [Halorubrum litoreum JCM 13561]
Length = 213
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV D RYG +I +H G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ D D +V+ IDEA FF E L + C AD G VIV+G D +
Sbjct: 67 VVDNEGDGPLDILDD--DPAEVVAIDEANFFSEALIEVCNALADR-GSRVIVSGTDQTFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 GEPFDPLPQLMATAEYVDKLQAICSVCGEPASRNQRLIEGEPAHVDDPTILVGAEESYEA 183
Query: 250 VCRQHYV 256
CR +V
Sbjct: 184 RCRDCHV 190
>gi|293376064|ref|ZP_06622316.1| thymidine kinase [Turicibacter sanguinis PC909]
gi|292645322|gb|EFF63380.1| thymidine kinase [Turicibacter sanguinis PC909]
Length = 201
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + I G M+AGKT L+RR++ R + K D RY D +V+H G+K+P
Sbjct: 7 EGWVEAICGSMYAGKTEELIRRLKRLDFARRPYCLFKPVIDNRYSEDEVVSHSGLKMPSI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ Y + IDE QFFE+ + D AD G VIVAGLD D+
Sbjct: 67 PIEHPIQILDHITDKTY----AVAIDEVQFFEENVVDVVEYLADR-GIRVIVAGLDKDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYMP 249
FG++ ++ ++ VTKLT+ C CG A + R +G + Y P
Sbjct: 122 GEPFGTMPILLTKSEFVTKLTSICSVCGAPATRSQRLINGQPASYHDPIIQVGAKEAYEP 181
Query: 250 VCRQ 253
CR
Sbjct: 182 RCRH 185
>gi|406663925|ref|ZP_11071932.1| Thymidine kinase [Cecembia lonarensis LW9]
gi|405551780|gb|EKB47434.1| Thymidine kinase [Cecembia lonarensis LW9]
Length = 194
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 5/174 (2%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALT 139
I VI G MF+GKT L+RR+ + V + K D RY +V+H+ + +
Sbjct: 19 IEVICGSMFSGKTEELIRRLNRALIARQKVEIFKPTVDKRYHEFDVVSHNENAIR----S 74
Query: 140 TLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSF 199
T +F + A D DV+GIDE QFF++ + + GK VI+AGLD D+ F
Sbjct: 75 TPVNFAEDIILLAGD-CDVVGIDEVQFFDNRIIHVAKVLANSGKRVIMAGLDMDFEGNPF 133
Query: 200 GSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ ++ +A+ VTK+ A C CG A ++ R T + L+G + Y CR+
Sbjct: 134 EPMPQLLAIAEYVTKVHAICMKCGDLASYSFRLTATKEKVLLGEKESYEARCRK 187
>gi|383454415|ref|YP_005368404.1| thymidine kinase [Corallococcus coralloides DSM 2259]
gi|380734463|gb|AFE10465.1| thymidine kinase [Corallococcus coralloides DSM 2259]
Length = 182
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR++ + V V K DTRY +V+H +KL + +
Sbjct: 1 MFSGKTEELIRRVKRALYGRQKVRVFKPRIDTRYDDTQVVSHSQLKLTSLPIERAEEIFR 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
D V+GIDE QF ++ C EA G VI AGLD DY R F + +
Sbjct: 61 HLSPD----TQVVGIDEVQFLGGEVVQVC-EALAQRGMRVICAGLDQDYQGRPFEPMPQL 115
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
+ +A+ VTK A C CG A + R + ++G + Y P CR+ +V+
Sbjct: 116 MAVAEYVTKELAICAVCGNPANRSQRIIGSEERVVVGAAGAYEPRCRKCHVA 167
>gi|300711174|ref|YP_003736988.1| thymidine kinase [Halalkalicoccus jeotgali B3]
gi|299124857|gb|ADJ15196.1| thymidine kinase [Halalkalicoccus jeotgali B3]
Length = 179
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MFAGKT LLRR++ G+ VAV K D RYG ++ TH+G + + T + +
Sbjct: 1 MFAGKTEELLRRLRRAEIAGQEVAVFKPATDDRYGKATVGTHNGRQWDADVIGTDAEAVR 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
D + V+ IDEA FF L D C E A +DG+ VIV+G D + F + +
Sbjct: 61 AI-PDRLNGEQVVAIDEANFFSPALVDVCEELA-NDGRRVIVSGTDQTFRGEPFEPLPQL 118
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPVCRQ-HYVSG 258
+ +A+ V K A C CG+ A R + E T ++G + Y CR H + G
Sbjct: 119 LAIAEYVEKFQAICSVCGEPASRNQRLVDGEPARREDPTVMVGAEESYEARCRNCHVLRG 178
Query: 259 Q 259
+
Sbjct: 179 E 179
>gi|320108306|ref|YP_004183896.1| thymidine kinase [Terriglobus saanensis SP1PR4]
gi|319926827|gb|ADV83902.1| Thymidine kinase [Terriglobus saanensis SP1PR4]
Length = 206
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 6/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + V+VGPMF+GK+ L+RR++ + VA K + D RY I +H + A
Sbjct: 8 GILEVVVGPMFSGKSEELIRRLKRARIARQRVACFKPDIDLRYHRTHIASHSE-QTHEAA 66
Query: 138 LTTLSSFRQK---FGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
+ T ++ R + F + D+V+V+G+DE QFF E + E GK VI+AGLD
Sbjct: 67 VVTPNAERLREALFSTRQIDEVEVVGVDEVQFFDEGILPLTMELVA-LGKRVIMAGLDTT 125
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ FG V +++ LAD VTKL+A C CG+ A T R + ++G + +Y CR
Sbjct: 126 FTAEPFGPVPNLMALADKVTKLSAVCMVCGQPAIHTQRLGHSQELVVVGAAGLYEARCRM 185
Query: 254 HY 255
H+
Sbjct: 186 HF 187
>gi|343521126|ref|ZP_08758094.1| thymidine kinase [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396332|gb|EGV08869.1| thymidine kinase [Parvimonas sp. oral taxon 393 str. F0440]
Length = 203
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ + G MF+GKT++L + + V K D RY IVTHD K+
Sbjct: 6 GKLILHTGSMFSGKTSSLWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNTKMRAIP 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD---HDGKTVIVAGLDGDY 194
+ + + + +IGIDE QF + + E + + TV++AGLD D+
Sbjct: 66 VEDIDEIIEYMKTST---ASIIGIDEVQFIKGDINKIVETLNLFLENEFTVVLAGLDMDF 122
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
F V +++P AD + K A C CG A+ + RKT + + +G S+ Y P+CR+
Sbjct: 123 KAEPFELVKELMPRADYLYKHHAVCANCGVDAWVSYRKTHDDERIKLGASESYEPLCRKC 182
Query: 255 YVSGQVVVEAARIVLESQ 272
Y E R +E+Q
Sbjct: 183 YYEK----EKIRKQMENQ 196
>gi|448537619|ref|ZP_21622631.1| thymidine kinase [Halorubrum hochstenium ATCC 700873]
gi|445702007|gb|ELZ53977.1| thymidine kinase [Halorubrum hochstenium ATCC 700873]
Length = 213
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV D RYG +I +H G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ D D +V+ IDEA FF + L + C AD G VIV+G D +
Sbjct: 67 VVDNEGDGPLDILDD--DPAEVVAIDEANFFSNALIEVCNALADR-GSRVIVSGTDQTFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 GEPFEPLPQLMATAEYVDKLQAICSVCGEPASRNQRLIEGEPAHVDDPTILVGAEESYEA 183
Query: 250 VCRQHYV 256
CR +V
Sbjct: 184 RCRDCHV 190
>gi|448592386|ref|ZP_21651493.1| thymidine kinase [Haloferax elongans ATCC BAA-1513]
gi|445731391|gb|ELZ82975.1| thymidine kinase [Haloferax elongans ATCC BAA-1513]
Length = 195
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G+ VAV K D RYG ++ +H G
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRAEIAGQEVAVFKPELDDRYGETTVGSHVGRSWDAS 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + + DV+ IDEA FF +L C + A DGK V+++G D +
Sbjct: 67 VVPSEGDGIWEI-HEQLNGEDVVAIDEANFFSTELVAVCEQLA-ADGKRVLISGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ LA+ V KL A C CG+ A R + + T L+G + Y
Sbjct: 125 GEPFEPLPQLMALAEYVDKLQAICTVCGEPATRNQRLIDGEPAHVDDPTILVGAEESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|448430554|ref|ZP_21584813.1| thymidine kinase [Halorubrum tebenquichense DSM 14210]
gi|445689123|gb|ELZ41368.1| thymidine kinase [Halorubrum tebenquichense DSM 14210]
Length = 213
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV D RYG +I +H G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ D D +V+ IDEA FF + L + C AD G VIV+G D +
Sbjct: 67 VVDNEGDGPLDILDD--DPAEVVAIDEANFFSNALIEVCNALADR-GSRVIVSGTDQTFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 GEPFEPLPQLMATAEYVDKLQAICSVCGEPASRNQRLIEGEPAHVDDPTILVGAEESYEA 183
Query: 250 VCRQHYV 256
CR +V
Sbjct: 184 RCRDCHV 190
>gi|15790504|ref|NP_280328.1| thymidine kinase [Halobacterium sp. NRC-1]
gi|169236240|ref|YP_001689440.1| thymidine kinase [Halobacterium salinarum R1]
gi|73920101|sp|Q9HPQ9.1|KITH_HALSA RecName: Full=Thymidine kinase
gi|229486315|sp|B0R5S5.1|KITH_HALS3 RecName: Full=Thymidine kinase
gi|10581006|gb|AAG19808.1| thymidine kinase [Halobacterium sp. NRC-1]
gi|167727306|emb|CAP14092.1| thymidine kinase [Halobacterium salinarum R1]
Length = 195
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GKT LLRR++ G++VA + D RYG ++ +H G
Sbjct: 7 SGWVEVITGSMFSGKTEELLRRLRRAEIAGQDVAAVTPAVDDRYGEATLGSHAGRSW--- 63
Query: 137 ALTTLSSFRQKFGS--DAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGD 193
A T + + S + V+ IDEA FF +L D C+E A DG+ V+++G D
Sbjct: 64 AATVVEPTAEGVASIPTLLNGEQVVAIDEANFFPAELVDVCQELA-ADGRRVVLSGTDQT 122
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIY 247
+ F V ++ +A+ V K+ A C CG+ A R E + T ++G + Y
Sbjct: 123 FRGEPFEPVPQLMAIAEYVDKMRAICMQCGEPATRNQRLIEGEPAHYDDPTVMVGAEETY 182
Query: 248 MPVCRQHYV 256
CR +V
Sbjct: 183 EARCRNCHV 191
>gi|33324268|gb|AAQ07943.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 6/177 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I +++GPMFAGKTT L+ I + + V IKS K+TR +I TH G++L
Sbjct: 10 GTISLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRD--KTIKTHSGIQLRPKQ 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+ S Q + + + +DEA FF+DL CR A+ + K +I+AGL+ + ++
Sbjct: 68 CKIIES-TQLSDVGSLTDIHAVVVDEAHFFDDLIK-CRTWAEEE-KIIILAGLNASFEQK 124
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F ++ I P V + C C + A +RK + L GGS++Y+ C
Sbjct: 125 MFPPIVRIFPYCSWVKYIGRTCMKCNQHNACLNVRKNADKTLILAGGSELYVTCCNN 181
>gi|343524932|ref|ZP_08761888.1| thymidine kinase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|418964811|ref|ZP_13516599.1| thymidine kinase [Streptococcus constellatus subsp. constellatus
SK53]
gi|343396804|gb|EGV09340.1| thymidine kinase [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|383344212|gb|EID22381.1| thymidine kinase [Streptococcus constellatus subsp. constellatus
SK53]
Length = 201
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G+K A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRDGFGVVSSRIGMKRKAMA 61
Query: 138 L---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+ T + F Q+ Y + IDEAQF +YD R D V+ GL
Sbjct: 62 IAEDTDIFRFIQEMPEKPY----CVLIDEAQFLSRHHVYDLAR-VVDELNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR T E + IGG++ Y
Sbjct: 117 DFRNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNGQPVYEGEQIQIGGNETY 176
Query: 248 MPVCRQHYVSGQVVVEAARIVLESQK 273
+PVCR+HY Q +E RI E+ K
Sbjct: 177 IPVCRKHYF--QPEIEEMRIEGENSK 200
>gi|219849943|ref|YP_002464376.1| thymidine kinase [Chloroflexus aggregans DSM 9485]
gi|254807840|sp|B8G6Y1.1|KITH_CHLAD RecName: Full=Thymidine kinase
gi|219544202|gb|ACL25940.1| Thymidine kinase [Chloroflexus aggregans DSM 9485]
Length = 193
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
S G I VI G M++GKT L+RR++ ++ + DTRY + +H G +L
Sbjct: 5 SEGGRIEVICGCMYSGKTEELIRRMRQVRIARQSYRIFTPRMDTRYAEGHVASHSGSRLE 64
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED----LYDFCREAADHDGKTVIVAGL 190
+ T+ + D V V+ IDE F+D + C+ AD G VIVAGL
Sbjct: 65 AITVATMCEI-LAYARD----VQVVAIDELHLFDDDPAEMVRGCQVLADR-GARVIVAGL 118
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
D +Y F +++ ++ LA+ V KL A C CG A + R + T ++GG
Sbjct: 119 DLNYRAEPFPAMMHLLALAEQVDKLYAICVKCGAYATRSQRLIDGKPAPANAPTIVVGGL 178
Query: 245 DIYMPVCRQHY 255
D+Y CR Y
Sbjct: 179 DMYEARCRACY 189
>gi|335047228|ref|ZP_08540249.1| thymidine kinase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333761036|gb|EGL38591.1| thymidine kinase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 203
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G++ + G MF+GKT++L + + V K D RY IVTHD K+
Sbjct: 5 KGKLILHTGSMFSGKTSSLWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNNKMRAI 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD---HDGKTVIVAGLDGD 193
+ + + + +IGIDE QF + + E + + TVI+AGLD D
Sbjct: 65 PVENIDEIIEYMKTST---ASIIGIDEVQFIKGDINKIVETLNLFLENEFTVILAGLDMD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ F V +++P AD + K A C CG A+ + RKT + + +G ++ Y P+CR+
Sbjct: 122 FKAEPFELVKELMPRADYLYKHHAVCANCGVDAWVSYRKTHDDERIKLGAAESYEPLCRK 181
Query: 254 HYVSGQVVVEAARIVLESQ 272
Y E R +E+Q
Sbjct: 182 CYYEK----EKIRKQMENQ 196
>gi|399888432|ref|ZP_10774309.1| thymidine kinase [Clostridium arbusti SL206]
Length = 194
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPM++GK+ L+RRI+ + V V K D RY ++ +V+H G K
Sbjct: 8 GWIEVIVGPMYSGKSEELIRRIRRAKIARQKVQVFKPEIDNRYSIEDVVSHCGEKEEAIP 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + D+ DV+ +DE QFF+ ++ D AD+ GK VI AGLD D+
Sbjct: 68 VKDSKEIVRLLEDDS----DVVAVDEVQFFDKNIVDILTAIADN-GKRVICAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG V ++ +A+ V K+ A C CG A T R LIG + Y
Sbjct: 123 NPFGCVPSLMAIAEFVDKIQAICMCCGNPATRTQRLINGKPANYYDPILLIGAKESYEAR 182
Query: 251 CRQ 253
CR+
Sbjct: 183 CRK 185
>gi|258647454|ref|ZP_05734923.1| thymidine kinase [Prevotella tannerae ATCC 51259]
gi|260852726|gb|EEX72595.1| thymidine kinase [Prevotella tannerae ATCC 51259]
Length = 116
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 155 QVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVT 213
+ DVIGIDEAQFF+D L D C A+ GK VIVAGLD D+ FG + ++ +AD VT
Sbjct: 6 EADVIGIDEAQFFDDSLVDVCNTLANK-GKRVIVAGLDMDFRGLPFGPMPALLAIADEVT 64
Query: 214 KLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
K+ A C CG A+ + R + K L+G D Y P+CR Y+
Sbjct: 65 KVRAICLRCGNLAYVSHRIVKSEKQVLLGEKDEYEPLCRACYLE 108
>gi|354610783|ref|ZP_09028739.1| Thymidine kinase [Halobacterium sp. DL1]
gi|353195603|gb|EHB61105.1| Thymidine kinase [Halobacterium sp. DL1]
Length = 195
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GKT LLRR++ G+ VA D RYG ++ +H G
Sbjct: 7 SGWVEVITGSMFSGKTEELLRRLRRAEIAGQEVAAFTPAIDDRYGEATLGSHAGRTWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ T + + D + V+ IDEA FF DL C+E A DG+ V+V+G D +
Sbjct: 67 VVETTADGVEAIPDDLNGE-QVVAIDEANFFPGDLVAVCQELA-ADGRRVVVSGTDQTFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ +A+ V K A C CG+ A R E + T ++G + Y
Sbjct: 125 GEPFDPIPQLMAVAEYVEKFRAICTQCGEPATRNQRLIEGDPAHYDDPTIMVGAEESYEA 184
Query: 250 VCRQHYV 256
CR +V
Sbjct: 185 RCRNCHV 191
>gi|418328401|ref|ZP_12939514.1| thymidine kinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232000|gb|EHM73015.1| thymidine kinase [Staphylococcus epidermidis 14.1.R1.SE]
Length = 161
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 109 VAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE 168
+ V K D RY + +V+H+G ++ ++T Q+ + ++V+VIGIDE QFFE
Sbjct: 1 MVVFKPAIDDRYHKEKVVSHNGNEIEAINISTA----QEILNHKLEEVNVIGIDEVQFFE 56
Query: 169 DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFF 228
D E +G VIVAGLD D+ F + ++ +++ +TKL A C CG +
Sbjct: 57 DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVCSVCGSPSSR 116
Query: 229 TLR------KTEETKTELIGGSDIYMPVCRQHYV 256
T R E+ L+G ++ Y P CR H++
Sbjct: 117 TQRLINGEPAKEDDPIILVGANESYEPRCRAHHI 150
>gi|160947737|ref|ZP_02094904.1| hypothetical protein PEPMIC_01672 [Parvimonas micra ATCC 33270]
gi|158446871|gb|EDP23866.1| thymidine kinase [Parvimonas micra ATCC 33270]
Length = 203
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G++ + G MF+GKT++L + + V K D RY IVTHD K+
Sbjct: 5 KGKLILHTGSMFSGKTSSLWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNNKMRAI 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAAD---HDGKTVIVAGLDGD 193
+ + + + +IGIDE QF + + E + + TV++AGLD D
Sbjct: 65 PVENIDEIIEYMKTST---ASIIGIDEVQFIKGDINKIVETLNLFLENEFTVVLAGLDMD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ F V +++P AD + K A C CG A+ + RKT + + +G ++ Y P+CR+
Sbjct: 122 FKAEPFELVKELMPRADYLYKHHAVCANCGVDAWVSYRKTHDDERIKLGAAESYEPLCRK 181
Query: 254 HYVSGQVVVEAARIVLESQ 272
Y E R +E+Q
Sbjct: 182 CYYEK----EKIRKQMENQ 196
>gi|418962644|ref|ZP_13514498.1| thymidine kinase [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383345179|gb|EID23312.1| thymidine kinase [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 215
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 61 SLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY 120
S++N + +E +++ G M +GKT +L+ ++G+ V ++ S DTR
Sbjct: 9 SIKNWRIWNELK---KMAQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRD 65
Query: 121 GLDSIVTHDGVKLPCCAL---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCR 175
G + + G+K A+ T + F Q+ Y + IDEAQF +YD R
Sbjct: 66 GFGVVSSRIGMKRKAVAIAEDTDIFRFIQEMPEKPY----CVLIDEAQFLSRRHVYDLAR 121
Query: 176 EAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE- 234
D V+ GL D+ F ++ LAD + ++ C+FC K+A LR T
Sbjct: 122 -VVDELNVPVMAFGLKNDFRNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNG 180
Query: 235 ----ETKTELIGGSDIYMPVCRQHYVSGQV 260
E + IGG++ Y+PVCR+HY ++
Sbjct: 181 KPVYEGEQIQIGGNETYIPVCRKHYFKPEI 210
>gi|421490984|ref|ZP_15938351.1| thymidine kinase [Streptococcus anginosus SK1138]
gi|400371981|gb|EJP24930.1| thymidine kinase [Streptococcus anginosus SK1138]
Length = 215
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 61 SLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY 120
S++N + +E +++ G M +GKT +L+ ++G+ V ++ S DTR
Sbjct: 9 SIKNWRIWNELK---KMAQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRD 65
Query: 121 GLDSIVTHDGVKLPCCAL---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCR 175
G + + G+K A+ T + F Q+ Y + IDEAQF +YD R
Sbjct: 66 GFGVVSSRIGMKRKAIAIAEDTDIFRFIQEMPEKPY----CVLIDEAQFLSRHHVYDLAR 121
Query: 176 EAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE- 234
D V+ GL D+ F ++ LAD + ++ C+FC K+A LR T
Sbjct: 122 -VVDELNVPVMAFGLKNDFRNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNG 180
Query: 235 ----ETKTELIGGSDIYMPVCRQHYVSGQV 260
E + IGG++ Y+PVCR+HY ++
Sbjct: 181 KPVYEGEQIQIGGNETYIPVCRKHYFKPEI 210
>gi|335031359|ref|ZP_08524801.1| thymidine kinase [Streptococcus anginosus SK52 = DSM 20563]
gi|333769827|gb|EGL46913.1| thymidine kinase [Streptococcus anginosus SK52 = DSM 20563]
Length = 215
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 61 SLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY 120
S++N + +E +++ G M +GKT +L+ ++G+ V ++ S DTR
Sbjct: 9 SIKNWRIWNELK---KMAQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRD 65
Query: 121 GLDSIVTHDGVKLPCCAL---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCR 175
G + + G+K A+ T + F Q+ Y + IDEAQF +YD R
Sbjct: 66 GFGVVSSRIGMKRKAIAIAEDTDIFHFIQEMPEKPY----CVLIDEAQFLSRRHVYDLAR 121
Query: 176 EAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE- 234
D V+ GL D+ F ++ LAD + ++ C+FC K+A LR T
Sbjct: 122 -VVDELNVPVMAFGLKNDFRNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNG 180
Query: 235 ----ETKTELIGGSDIYMPVCRQHYVSGQV 260
E + IGG++ Y+PVCR+HY ++
Sbjct: 181 KPIYEGEQIQIGGNETYIPVCRKHYFKPEI 210
>gi|222099242|ref|YP_002533810.1| thymidine kinase [Thermotoga neapolitana DSM 4359]
gi|221571632|gb|ACM22444.1| Thymidine kinase [Thermotoga neapolitana DSM 4359]
Length = 191
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG++ VI GPM++GKTT LL ++ + VAV K D RY IV+H G
Sbjct: 11 SGKLTVITGPMYSGKTTELLSFVEIYRLGRKKVAVFKPKIDNRYHSTKIVSHSG------ 64
Query: 137 ALTTLSSFRQKFGSDAYDQVDV----IGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ +F + + + +D + +DE QFF DL+D RE + G V AGLD
Sbjct: 65 --DGVEAFTVERPEEMWKYIDEETRGVFVDEVQFFSRDLFDVVRELLNR-GIDVFCAGLD 121
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPV 250
+ + F + ++ LAD+V K A C+ CG+ A TL+ + +GG + Y+ V
Sbjct: 122 LTHKQNPFETTAMLLSLADTVIKKKAVCQRCGEYSATLTLKIAGGEEEIDVGGQEKYIAV 181
Query: 251 CRQHY 255
CR Y
Sbjct: 182 CRDCY 186
>gi|282882580|ref|ZP_06291199.1| thymidine kinase [Peptoniphilus lacrimalis 315-B]
gi|281297555|gb|EFA90032.1| thymidine kinase [Peptoniphilus lacrimalis 315-B]
Length = 200
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + + G MF+GKT++L + + + K D+R+ IV+HD
Sbjct: 6 GRLILHTGSMFSGKTSSLEKDLNRFSIANYKTMAFKPKVDSRFSESKIVSHDK------- 58
Query: 138 LTTLSSFRQKFGSDAYDQV-----DVIGIDEAQFFED----LYDFCREAADHDGKTVIVA 188
+ S+ + SD V VIGIDE QF +D + E D TV+VA
Sbjct: 59 -NSFSAITVEDSSDILKVVLEKSPQVIGIDEIQFLKDKPEKILKNIEEILDM-SVTVVVA 116
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
GLD DYL SF V +++P AD + K A C+ CG A+ + RK L+G Y
Sbjct: 117 GLDMDYLAHSFEIVKELMPKADYLYKHHAVCKRCGTDAWVSHRKVNVNDRLLLGAEGEYE 176
Query: 249 PVCRQHYVSGQVVVEAARIVLESQK 273
P+CR Y + +E +I L +K
Sbjct: 177 PLCRSCY---KKAIEEDKINLNQEK 198
>gi|448493764|ref|ZP_21609195.1| thymidine kinase [Halorubrum californiensis DSM 19288]
gi|445689940|gb|ELZ42162.1| thymidine kinase [Halorubrum californiensis DSM 19288]
Length = 213
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I VI G MF+GKT LLRR++ G++VAV D RYG +I +H G +
Sbjct: 7 SGWIEVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEAT 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ D + +V+ +DEA FF + L + C AD G VIV+G D +
Sbjct: 67 VVDNEGDGPLDILDD--EPAEVVAVDEANFFSNALIEVCNALADR-GSRVIVSGTDQTFR 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ A+ V KL A C CG+ A R E + T L+G + Y
Sbjct: 124 GEPFEPLPQLMATAEYVDKLQAICSVCGEPASRNQRLIEGEPAHADDPTILVGAEESYEA 183
Query: 250 VCRQHYV 256
CR +V
Sbjct: 184 RCRDCHV 190
>gi|315222987|ref|ZP_07864866.1| thymidine kinase [Streptococcus anginosus F0211]
gi|315187937|gb|EFU21673.1| thymidine kinase [Streptococcus anginosus F0211]
Length = 194
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G+K A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRDGFGVVSSRIGMKRKAVA 61
Query: 138 L---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+ T + F Q+ Y + IDEAQF +YD R D V+ GL
Sbjct: 62 IAEDTDIFRFIQEMPEKPY----CVLIDEAQFLSRHHVYDLAR-VVDELNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR T E + IGG++ Y
Sbjct: 117 DFRNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNGKPVYEGEQIQIGGNETY 176
Query: 248 MPVCRQHYVSGQV 260
+PVCR+HY ++
Sbjct: 177 IPVCRKHYFQPEI 189
>gi|15643167|ref|NP_228211.1| thymidine kinase [Thermotoga maritima MSB8]
gi|418046332|ref|ZP_12684426.1| Thymidine kinase [Thermotoga maritima MSB8]
gi|7674105|sp|Q9WYN2.1|KITH_THEMA RecName: Full=Thymidine kinase
gi|145580144|pdb|2ORW|A Chain A, Thermotoga Maritima Thymidine Kinase 1 Like Enzyme In
Complex With Tp4a
gi|145580145|pdb|2ORW|B Chain B, Thermotoga Maritima Thymidine Kinase 1 Like Enzyme In
Complex With Tp4a
gi|158430368|pdb|2QPO|A Chain A, Thermotoga Maritima Thymidine Kinase In The Apo Form
gi|158430369|pdb|2QPO|B Chain B, Thermotoga Maritima Thymidine Kinase In The Apo Form
gi|158430370|pdb|2QPO|C Chain C, Thermotoga Maritima Thymidine Kinase In The Apo Form
gi|158430371|pdb|2QPO|D Chain D, Thermotoga Maritima Thymidine Kinase In The Apo Form
gi|158430375|pdb|2QQ0|A Chain A, Thymidine Kinase From Thermotoga Maritima In Complex With
Thymidine + Appnhp
gi|158430376|pdb|2QQ0|B Chain B, Thymidine Kinase From Thermotoga Maritima In Complex With
Thymidine + Appnhp
gi|158430377|pdb|2QQE|A Chain A, Thymidine Kinase From Thermotoga Maritima In Complex With
Thymidine
gi|158430378|pdb|2QQE|B Chain B, Thymidine Kinase From Thermotoga Maritima In Complex With
Thymidine
gi|4980905|gb|AAD35486.1|AE001719_12 thymidine kinase [Thermotoga maritima MSB8]
gi|351675885|gb|EHA59045.1| Thymidine kinase [Thermotoga maritima MSB8]
Length = 184
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG++ VI GPM++GKTT LL ++ + VAV K D+RY IV+H G +
Sbjct: 2 SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPKIDSRYHSTMIVSHSGNGVEAH 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ R+ D + IDE QFF L++ ++ D G V AGLD +
Sbjct: 62 VIERPEEMRKYIEEDTRG----VFIDEVQFFNPSLFEVVKDLLDR-GIDVFCAGLDLTHK 116
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F + ++ LAD+V K A C CG+ A TL+ + +GG + Y+ VCR
Sbjct: 117 QNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEEIDVGGQEKYIAVCRDC 176
Query: 255 Y 255
Y
Sbjct: 177 Y 177
>gi|403252128|ref|ZP_10918439.1| thymidine kinase [Thermotoga sp. EMP]
gi|402812521|gb|EJX26999.1| thymidine kinase [Thermotoga sp. EMP]
Length = 184
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG++ VI GPM++GKTT LL ++ + VAV K D+RY IV+H G +
Sbjct: 2 SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPKIDSRYHSTMIVSHSGNGVEAH 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ R+ D + IDE QFF L++ ++ D G V AGLD +
Sbjct: 62 VIERPEEMRKYIEKDTRG----VFIDEVQFFNPSLFEVVKDLLDR-GIDVFCAGLDLTHK 116
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F + ++ LAD+V K A C CG+ A TL+ + +GG + Y+ VCR
Sbjct: 117 QNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEEIDVGGQEKYIAVCRDC 176
Query: 255 Y 255
Y
Sbjct: 177 Y 177
>gi|423068534|ref|ZP_17057322.1| thymidine kinase [Streptococcus intermedius F0395]
gi|355366789|gb|EHG14506.1| thymidine kinase [Streptococcus intermedius F0395]
Length = 201
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G+K A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRDGFGVVSSRIGMKRKAVA 61
Query: 138 L---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+ T + F Q+ Y + IDEAQF +YD R D V+ GL
Sbjct: 62 IAEDTDIFRFIQEMPEKPY----CVLIDEAQFLSRHHVYDLAR-VVDELNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR T E + IGG++ Y
Sbjct: 117 DFRNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNGQPVYEGEQIQIGGNETY 176
Query: 248 MPVCRQHYVSGQV 260
+PVCR+HY ++
Sbjct: 177 IPVCRKHYFHPEI 189
>gi|167412589|gb|ABZ80023.1| thymidine kinase [Vaccinia virus GLV-1h68]
Length = 81
Score = 84.3 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 56/77 (72%)
Query: 180 HDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE 239
++GK VIVA LDG + R+ F +++++IPL++ V KLTA C C K A F+ R EET+ E
Sbjct: 3 NEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIE 62
Query: 240 LIGGSDIYMPVCRQHYV 256
+IGG+D+Y VCR+ Y+
Sbjct: 63 IIGGNDMYQSVCRKCYI 79
>gi|319939135|ref|ZP_08013499.1| thymidine kinase [Streptococcus anginosus 1_2_62CV]
gi|319812185|gb|EFW08451.1| thymidine kinase [Streptococcus anginosus 1_2_62CV]
Length = 194
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G+K A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRDGFGVVSSRIGMKRKAIA 61
Query: 138 L---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+ T + F Q+ Y + IDEAQF +YD R D V+ GL
Sbjct: 62 IAEDTDIFHFIQEMPEKPY----CVLIDEAQFLSRRHVYDLAR-VVDELNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR T E + IGG++ Y
Sbjct: 117 DFRNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNGKPVYEGEQIQIGGNETY 176
Query: 248 MPVCRQHYVSGQV 260
+PVCR+HY ++
Sbjct: 177 IPVCRKHYFKPEI 189
>gi|226226174|ref|YP_002760280.1| thymidine kinase [Gemmatimonas aurantiaca T-27]
gi|226089365|dbj|BAH37810.1| thymidine kinase [Gemmatimonas aurantiaca T-27]
Length = 203
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRY-GLDSIVTHDGVKLPCC 136
G + V+ G MF+GKT LLRR++ T + V V KS+ D RY GL ++ +HD
Sbjct: 10 GWMEVVAGVMFSGKTEELLRRVRRATIARKRVQVFKSHLDDRYAGLWAVSSHDRRTFEAT 69
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + + A VI IDEAQF + + AD G+ VI+AG D D+
Sbjct: 70 PVDSSAQILLRLDPMA----QVIAIDEAQFLDAGIVQVASSLADR-GRRVILAGTDTDFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
FG++ ++ +++ V KL A C CG A R + E+ T ++G +D Y
Sbjct: 125 GEPFGAMPQLMAVSEMVDKLHAICVLCGSPASRNQRLIDGKPAPYESPTIMVGAADSYEA 184
Query: 250 VCRQHYV 256
CR ++
Sbjct: 185 RCRACHI 191
>gi|300814868|ref|ZP_07095099.1| thymidine kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300510958|gb|EFK38227.1| thymidine kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 200
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + + G MF+GKT++L + + + K D+R+ IV+HD
Sbjct: 6 GRLILHTGSMFSGKTSSLEKDLNRFSIANYKTMAFKPKVDSRFSESKIVSHDK------- 58
Query: 138 LTTLSSFRQKFGSDAYDQV-----DVIGIDEAQFFED----LYDFCREAADHDGKTVIVA 188
+ S+ + SD V VIGIDE QF +D + E D TV+VA
Sbjct: 59 -NSFSAITVEDSSDILKVVLEKSPQVIGIDEIQFLKDKPEKILKNIEEILDM-SVTVVVA 116
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
GLD DYL SF V +++P AD + K A C+ CG A+ + RK L+G Y
Sbjct: 117 GLDMDYLAHSFEIVKELMPKADYLYKHHAVCKRCGTDAWVSHRKVNVNDRLLLGAEGEYE 176
Query: 249 PVCRQHYVSGQVVVEAARIVLESQK 273
P+CR Y + +E I L +K
Sbjct: 177 PLCRSCY---KKAIEEDEINLNQEK 198
>gi|170288332|ref|YP_001738570.1| thymidine kinase [Thermotoga sp. RQ2]
gi|238688818|sp|B1L989.1|KITH_THESQ RecName: Full=Thymidine kinase
gi|170175835|gb|ACB08887.1| Thymidine kinase [Thermotoga sp. RQ2]
Length = 184
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG++ VI GPM++GKTT LL ++ + VAV K D+RY IV+H G +
Sbjct: 2 SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPKIDSRYHSTMIVSHSGNGVEAH 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ R+ D + IDE QFF L++ ++ D G V AGLD +
Sbjct: 62 VIERPEEMRKYIEEDTRG----VFIDEVQFFSPGLFEVVKDLLDR-GIDVFCAGLDLTHK 116
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F + ++ LAD+V K A C CG+ A TL+ + +GG + Y+ VCR
Sbjct: 117 QNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEEIDVGGQEKYIAVCRDC 176
Query: 255 Y 255
Y
Sbjct: 177 Y 177
>gi|406986026|gb|EKE06709.1| hypothetical protein ACD_18C00299G0001, partial [uncultured
bacterium]
Length = 173
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 95 LLRRIQAETQKGRNVAVIKSNKDTRYGL-DSIVTHDGVKLPCCALTTLSSFRQKF----G 149
L+RR+ + + + + K D R+G I + +G L + +S G
Sbjct: 2 LIRRLTIQDIAQKKIVIFKHGADDRFGKPKDISSRNGHHLSAIPVKQVSEMYDHLDSALG 61
Query: 150 SDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIP 207
+D +D++GIDE QFF+ +L + C++ D G +VI GLD DYLR F + ++
Sbjct: 62 GQGFDNLDLVGIDEIQFFDKDELVELCKKLVDEKGISVIACGLDSDYLRVPFETTAHLMA 121
Query: 208 LADSVTKLTARCEFC-GKRAFFTLRKT-EETKTELIGGSDIYMPVCRQHYVSGQ 259
LADSV K A C C A +T R + + + E+ GSD Y P CR+ VSG+
Sbjct: 122 LADSVYKSNAVCMKCRDTDAVYTHRLSGGDDRFEV--GSDNYEPRCRKCRVSGE 173
>gi|149054921|gb|EDM06738.1| rCG32815, isoform CRA_d [Rattus norvegicus]
Length = 121
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 180 HDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE 239
+ GKTVIVA LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E
Sbjct: 3 NTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREASYTKRLGLEKEVE 62
Query: 240 LIGGSDIYMPVCRQHY 255
+IGG+D Y VCR Y
Sbjct: 63 VIGGADKYHSVCRLCY 78
>gi|163847863|ref|YP_001635907.1| thymidine kinase [Chloroflexus aurantiacus J-10-fl]
gi|222525736|ref|YP_002570207.1| thymidine kinase [Chloroflexus sp. Y-400-fl]
gi|189028750|sp|A9WGI6.1|KITH_CHLAA RecName: Full=Thymidine kinase
gi|254807841|sp|B9LJ65.1|KITH_CHLSY RecName: Full=Thymidine kinase
gi|163669152|gb|ABY35518.1| Thymidine kinase [Chloroflexus aurantiacus J-10-fl]
gi|222449615|gb|ACM53881.1| Thymidine kinase [Chloroflexus sp. Y-400-fl]
Length = 193
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 75 SPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLP 134
S G I VI G M++GKT L+RR++ ++ + DTRY + +H G +L
Sbjct: 5 SDGGRIEVICGCMYSGKTEELIRRMRQVRIARQSYRIFTPRMDTRYAEGQVASHSGSRLE 64
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED----LYDFCREAADHDGKTVIVAGL 190
+ T+ DA V+ IDE F+D + C+ A+ G VIVAGL
Sbjct: 65 AITVATMKDI-LAHAEDA----QVVAIDELHLFDDDPAEMVRGCQWLANR-GVRVIVAGL 118
Query: 191 DGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGS 244
D +Y F +++ ++ LA+ V KL A C CG A + R + + T ++GG
Sbjct: 119 DLNYRAEPFPAMMHLLALAEQVDKLYAICVKCGAYATRSQRLIDGKPAPADAPTIVVGGL 178
Query: 245 DIYMPVCRQHY 255
D+Y CR Y
Sbjct: 179 DMYEARCRTCY 189
>gi|310830398|ref|YP_003965499.1| Thymidine kinase [Paenibacillus polymyxa SC2]
gi|309249865|gb|ADO59431.1| Thymidine kinase [Paenibacillus polymyxa SC2]
Length = 200
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRI-QAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G+I VI GPMF+ K+ L++RI + E G+ V K +D R+ D IV+ G + P
Sbjct: 7 GKISVITGPMFSEKSGELIKRILKMERYGGKKVKAYKPTEDFRFEADWIVSRMGYRYPAS 66
Query: 137 AL--TTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDY 194
+ S ++ + + +DV+ DE QFF + + GK VI GL+ DY
Sbjct: 67 NIPRKLTDSIIEEILVET-ESIDVVAFDEVQFFSKPIMGLVDELAYRGKHVICDGLNMDY 125
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFC-GKRAFFTLRKTEETKTE-----LIGGSDIYM 248
+ FG + ++ +AD +T LT+ C C A FT R + LIG + Y
Sbjct: 126 REKEFGFMGGLLTMADEITNLTSYCSVCQSPHARFTQRMVNGMPAKMGPIILIGDKEDYE 185
Query: 249 PVCRQHYV 256
CR Y+
Sbjct: 186 VRCRSCYI 193
>gi|148269657|ref|YP_001244117.1| thymidine kinase [Thermotoga petrophila RKU-1]
gi|281411633|ref|YP_003345712.1| Thymidine kinase [Thermotoga naphthophila RKU-10]
gi|166220766|sp|A5IK18.1|KITH_THEP1 RecName: Full=Thymidine kinase
gi|147735201|gb|ABQ46541.1| Thymidine kinase [Thermotoga petrophila RKU-1]
gi|281372736|gb|ADA66298.1| Thymidine kinase [Thermotoga naphthophila RKU-10]
Length = 184
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG++ +I GPM++GKTT LL ++ + VAV K D+RY IV+H G +
Sbjct: 2 SGKLTIITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPKIDSRYHSTMIVSHSGNGVEAH 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ R+ D + IDE QFF L++ ++ D G V AGLD +
Sbjct: 62 VIERPEEIRKYIEEDTRG----VFIDEVQFFSPGLFEVVKDLLDR-GIDVFCAGLDLTHK 116
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGK-RAFFTLRKTEETKTELIGGSDIYMPVCRQH 254
+ F + ++ LAD+V K A C CG+ A TL+ + +GG + Y+ VCR
Sbjct: 117 QNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEEIDVGGQEKYIAVCRDC 176
Query: 255 Y 255
Y
Sbjct: 177 Y 177
>gi|392428748|ref|YP_006469759.1| thymidine kinase [Streptococcus intermedius JTH08]
gi|419776706|ref|ZP_14302628.1| thymidine kinase [Streptococcus intermedius SK54]
gi|383846117|gb|EID83517.1| thymidine kinase [Streptococcus intermedius SK54]
gi|391757894|dbj|BAM23511.1| thymidine kinase [Streptococcus intermedius JTH08]
Length = 201
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G+K A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRDGFGVVSSRIGMKRKAMA 61
Query: 138 L---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+ T + F Q+ Y + IDEAQF +YD + D V+ GL
Sbjct: 62 IAEDTDIFHFIQEMPEKPY----CVLIDEAQFLSRHHVYDLAK-VVDELNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR T E + IGG++ Y
Sbjct: 117 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNGQPVYEGEQIQIGGNETY 176
Query: 248 MPVCRQHYVSGQV 260
+PVCR+HY ++
Sbjct: 177 IPVCRKHYFHPEI 189
>gi|423070378|ref|ZP_17059154.1| thymidine kinase [Streptococcus intermedius F0413]
gi|424787740|ref|ZP_18214504.1| thymidine kinase family protein [Streptococcus intermedius BA1]
gi|355365739|gb|EHG13459.1| thymidine kinase [Streptococcus intermedius F0413]
gi|422113494|gb|EKU17232.1| thymidine kinase family protein [Streptococcus intermedius BA1]
Length = 201
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G+K A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKGVVIMTSALDTRDGFGVVSSRIGMKRKAMA 61
Query: 138 L---TTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+ T + F Q+ Y + IDEAQF +YD + D V+ GL
Sbjct: 62 IAEDTDIFRFIQEMPEKPY----CVLIDEAQFLSRHHVYDLAK-VVDELNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR T E + IGG++ Y
Sbjct: 117 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTTNGQPVYEGEQIQIGGNETY 176
Query: 248 MPVCRQHYVSGQV 260
+PVCR+HY ++
Sbjct: 177 IPVCRKHYFHPEI 189
>gi|357238666|ref|ZP_09126002.1| thymidine kinase [Streptococcus ictaluri 707-05]
gi|356752388|gb|EHI69513.1| thymidine kinase [Streptococcus ictaluri 707-05]
Length = 197
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G++
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGIVSSRIGMRREAIP 61
Query: 138 LTTLSSFRQKFGSDAYDQVDV----IGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLD 191
+T+ + + +Q+DV + IDE QF +++YD R DH V+ GL
Sbjct: 62 ITSDMAIFEYI-----EQLDVKPYCVLIDECQFLSKKNVYDLAR-VVDHLDVPVMAFGLK 115
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSD 245
D+ F ++ LAD + ++ C+FC K+A LR TE+ K IGG++
Sbjct: 116 NDFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLR-TEDGKPVYEGAQIQIGGNE 174
Query: 246 IYMPVCRQHYVSGQVVVE 263
Y+PVCR+HY + ++ E
Sbjct: 175 TYIPVCRKHYFNPPIIEE 192
>gi|125457|sp|P27158.1|KITH_RAT RecName: Full=Thymidine kinase, cytosolic
gi|207330|gb|AAA75560.1| thymidine kinase, partial [Rattus norvegicus]
Length = 121
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 68/119 (57%), Gaps = 13/119 (10%)
Query: 72 SVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV 131
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 13 SPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDRN 71
Query: 132 ---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC E + GKTVIV
Sbjct: 72 TMDALPACMLKDVA--QEALG------VAVIGIDEGQFFPDIVDFC-ETMANTGKTVIV 121
>gi|71894532|ref|YP_278640.1| thymidine kinase [Mycoplasma synoviae 53]
gi|71851320|gb|AAZ43929.1| thymidine kinase [Mycoplasma synoviae 53]
Length = 183
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + VI GPMFAGK+ ++R + G K + DTR+ ++ IV+ G K+
Sbjct: 8 GSLEVITGPMFAGKSNEIIRILNVNQIAGFKPLSFKPDFDTRWSVNHIVSRTGSKMETIN 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
L D VI DE FF+ + VIV+GLD DYL +
Sbjct: 68 LKDPKDIWNHIKKDT----QVIAFDEVHFFDMSIVAEIQKLIEKKYKVIVSGLDMDYLGK 123
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
F V + LAD + KL A C C A T RK + + L+G S+ Y CR
Sbjct: 124 PFEVVSQLCCLADKIKKLKAVCMNCHGVANMTYRKVDNNERNLLGDSE-YEARCRN 178
>gi|406960243|gb|EKD87364.1| hypothetical protein ACD_36C00116G0005 [uncultured bacterium]
Length = 190
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 74 SSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHD--- 129
S G++ VI GPMF+GKT L+ ++ T+ G V +K + D RYG S I +HD
Sbjct: 4 SKKKGKLTVIAGPMFSGKTGKLVAMVEVFTRMGYKVLTVKPSIDNRYGAKSEIHSHDNKR 63
Query: 130 -------GVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-----DLYDFCREA 177
G K + LSS K + +DE QFF+ D+ + A
Sbjct: 64 SKAIIVDGQKPATIVESILSSGANK-----------VILDEVQFFDKRKIIDVALKLKSA 112
Query: 178 ADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETK 237
H VI AGL DY R+ FG+ D++ LAD +L A C+ CG A T R
Sbjct: 113 GIH----VIAAGLLYDYQRKPFGATPDLLGLADERLELFAICQRCGSLARHTERLKGGKG 168
Query: 238 TELIGGSDIYMPVC 251
++G +D Y+ VC
Sbjct: 169 QVVVGAADKYIAVC 182
>gi|402552325|ref|YP_006601042.1| thymidine kinase [Mycoplasma genitalium M2288]
gi|401801020|gb|AFQ04334.1| thymidine kinase [Mycoplasma genitalium M2288]
Length = 213
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
+ S + G VI GPMF+GKT LL +I+ +V + K DTR + + + +
Sbjct: 5 QPSFQTKKGWTEVICGPMFSGKTEKLLHKIKRWKIAKISVVIFKPIIDTRQ-TNIVKSRN 63
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQV-----DVIGIDEAQFFEDLYDFCREAADHDGKT 184
G A+T S F + YD + ++ IDEAQFF + + GK
Sbjct: 64 GEYDQ--AITINSPF------EIYDHLVDKNYQIVAIDEAQFFSNEIIEVVTTLNEIGKN 115
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE---LI 241
VI++GLD D+ FG + ++ +AD V KL A C CG A T R + + LI
Sbjct: 116 VIISGLDTDFRAEPFGCIPQLLAIADVVNKLDAICNVCGSLAQRTQRLVNKNTNDNLVLI 175
Query: 242 GGSDIYMPVCRQHY 255
G ++ Y C+ H+
Sbjct: 176 GDAEAYEARCKLHH 189
>gi|448414295|ref|ZP_21577434.1| thymidine kinase [Halosarcina pallida JCM 14848]
gi|445682588|gb|ELZ35005.1| thymidine kinase [Halosarcina pallida JCM 14848]
Length = 195
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GKT LLRR++ G+ V V K D RYG ++ +H G +
Sbjct: 7 SGWVEVITGSMFSGKTEELLRRLRRAEIAGQEVGVFKPAVDDRYGETTVGSHAGSQWEAH 66
Query: 137 ALTT----LSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ + +K + DV+ +DEA FF +L D C A DG+ V+V+G D
Sbjct: 67 VVPAEGDGVWEILEKLNGE-----DVVAVDEANFFSAELVDVCERLA-ADGRRVLVSGTD 120
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSD 245
+ F + ++ A+ V KL A C CG+ A R + + T ++G +
Sbjct: 121 QTFRGEPFEPLPQLMATAEYVDKLQAICTVCGEPATRNQRLVDGEPARYDDPTIVVGAEE 180
Query: 246 IYMPVCRQ 253
Y CR
Sbjct: 181 SYEARCRN 188
>gi|110667749|ref|YP_657560.1| thymidine kinase [Haloquadratum walsbyi DSM 16790]
gi|121684867|sp|Q18J88.1|KITH_HALWD RecName: Full=Thymidine kinase
gi|109625496|emb|CAJ51923.1| thymidine kinase [Haloquadratum walsbyi DSM 16790]
Length = 225
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I V+ G MF+GKT LLRR++ G+++AV K D RYG ++ +H G +
Sbjct: 7 SGWIEVVTGSMFSGKTEELLRRLRRAEIAGQSIAVFKPAVDDRYGETTVGSHVGRQWEAA 66
Query: 137 ALTT-----------LSSFRQKFGSDAY------------------DQVDVIGIDEAQFF 167
+ LS +Q + D VDV+ IDEA FF
Sbjct: 67 VVPNEGEDIWNIKHELSKKKQNHRTTTQCRSGDGTNNPGGVIPSNDDSVDVVAIDEANFF 126
Query: 168 E-DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRA 226
+L C E+ +DG V+V+G D Y F + ++ +A+ V KL A C CG+ A
Sbjct: 127 STELVSVC-ESLANDGYRVVVSGTDQTYRGEPFEPLPQLMAVAEYVDKLQAICTQCGEPA 185
Query: 227 FFTLRKTEET------KTELIGGSDIYMPVCRQHYV 256
R +++ T ++G + Y CR ++
Sbjct: 186 TRNQRLVDDSPAHIDDPTIVVGADETYEARCRNCHI 221
>gi|385803193|ref|YP_005839593.1| thymidine kinase [Haloquadratum walsbyi C23]
gi|339728685|emb|CCC39846.1| thymidine kinase [Haloquadratum walsbyi C23]
Length = 225
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I V+ G MF+GKT LLRR++ G+++AV K D RYG ++ +H G +
Sbjct: 7 SGWIEVVTGSMFSGKTEELLRRLRRAEIAGQSIAVFKPAVDDRYGETTVGSHVGRQWEAA 66
Query: 137 ALTT-----------LSSFRQKFGSDAY------------------DQVDVIGIDEAQFF 167
+ LS +Q + D VDV+ IDEA FF
Sbjct: 67 VVPNEGEDIWNIKDELSKKKQNHRTTTQCRSGDGTNNPGGVIPSNDDSVDVVAIDEANFF 126
Query: 168 E-DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRA 226
+L C E+ +DG V+V+G D Y F + ++ +A+ V KL A C CG+ A
Sbjct: 127 STELVSVC-ESLANDGYRVVVSGTDQTYRGEPFEPLPQLMAVAEYVDKLQAICTQCGEPA 185
Query: 227 FFTLRKTEET------KTELIGGSDIYMPVCRQHYV 256
R +++ T ++G + Y CR ++
Sbjct: 186 TRNQRLVDDSPAHIDDPTIVVGADETYEARCRNCHI 221
>gi|345004797|ref|YP_004807650.1| thymidine kinase [halophilic archaeon DL31]
gi|344320423|gb|AEN05277.1| Thymidine kinase [halophilic archaeon DL31]
Length = 195
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + V+ G MF+GKT LLRR++ G++V D RYG +I +H+G +
Sbjct: 7 SGWVEVVTGSMFSGKTEELLRRLRRAEIAGQDVIAFTPAIDDRYGDTTIGSHEGRQWDAQ 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ + D + +V+ IDEA FF+ DL D C + A DG+ V+V+G D +
Sbjct: 67 VVDNEGAGVWDI-EDHLNGQEVVAIDEANFFDNDLVDVCEKLA-ADGRRVVVSGTDITFR 124
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMP 249
F + ++ A+ V KL A C CG+ A R + + T ++G + Y
Sbjct: 125 GEPFTPLPAVMATAEYVDKLRAICSVCGEPATRNQRLVDGEPAHIDDPTIVVGAEESYEA 184
Query: 250 VCRQ 253
CR
Sbjct: 185 RCRN 188
>gi|406658419|ref|ZP_11066559.1| thymidine kinase [Streptococcus iniae 9117]
gi|405578634|gb|EKB52748.1| thymidine kinase [Streptococcus iniae 9117]
Length = 192
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G+K
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGLVSSRIGMKREATP 61
Query: 138 LTT---LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+T + S+ + Y I IDE QF E++YD R DH V+ GL
Sbjct: 62 ITDDMDIFSYISQLSEKPY----CILIDECQFLSKENVYDLAR-VVDHLNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDI 246
D+ F ++ LAD + ++ C++C K+A LR TE K IGG++
Sbjct: 117 DFQNELFEGSKYLLLLADKIDEIKTICQYCSKKATMVLR-TENGKPVYQGQQIQIGGNET 175
Query: 247 YMPVCRQHY 255
Y+PVCR+HY
Sbjct: 176 YIPVCRKHY 184
>gi|309790795|ref|ZP_07685340.1| thymidine kinase [Oscillochloris trichoides DG-6]
gi|308227166|gb|EFO80849.1| thymidine kinase [Oscillochloris trichoides DG6]
Length = 177
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR++ ++ + DTRY + +H G +L +SS ++
Sbjct: 1 MFSGKTEELIRRMRQVQIARQHCRIFTPRLDTRYTSSQVASHSGARLEA---VPVSSIKE 57
Query: 147 KFGSDAYDQVDVIGIDEAQFFED----LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSV 202
+ V VI IDE F ED + C+E AD G V+VAGLD +Y F ++
Sbjct: 58 VIAGA--EGVQVIAIDELHFLEDRPEEIVAGCQELADR-GLRVLVAGLDQNYRAEPFPAM 114
Query: 203 IDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPVCRQHY 255
++ LA+ V KL A C CG A + R + T ++GG D+Y CR Y
Sbjct: 115 AQLMALAEQVDKLYAICVRCGAYATRSQRLIDGHPAPANAPTIVVGGLDLYEARCRACY 173
>gi|357637935|ref|ZP_09135808.1| thymidine kinase [Streptococcus urinalis 2285-97]
gi|418416400|ref|ZP_12989599.1| thymidine kinase [Streptococcus urinalis FB127-CNA-2]
gi|357586389|gb|EHJ55797.1| thymidine kinase [Streptococcus urinalis 2285-97]
gi|410874218|gb|EKS22149.1| thymidine kinase [Streptococcus urinalis FB127-CNA-2]
Length = 197
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G++ A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGIVSSRIGMRREAVA 61
Query: 138 LTT---LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+T + SF +K Y + IDE QF + +YDF R D V+ GL
Sbjct: 62 ITDDMDVFSFIEKMPEKPY----CVLIDECQFLTKKHVYDFSR-VVDELNVPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR E IGG++ Y
Sbjct: 117 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTENGKPVYEGNQIQIGGNETY 176
Query: 248 MPVCRQHY 255
+PVCR+HY
Sbjct: 177 IPVCRKHY 184
>gi|421767672|ref|ZP_16204415.1| Thymidine kinase [Lactococcus garvieae DCC43]
gi|407623775|gb|EKF50584.1| Thymidine kinase [Lactococcus garvieae DCC43]
Length = 206
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GK+ +L+ ++G+ V ++ S+ DTR G+ + + G+ A
Sbjct: 17 AQLYFKYGSMNSGKSIEILKVAHNYEEQGKPVLIMTSSLDTRAGVGVVASRIGMSSAAVA 76
Query: 138 LTTLSSFRQKFGSDAYDQVD-------VIGIDEAQFF--EDLYDFCREAADHDGKTVIVA 188
+ + YD V+ + IDEAQF +++YD R D D V+
Sbjct: 77 IDETM--------NVYDYVESLPVRPFCVLIDEAQFLSKQNIYDLARVVDDLD-VPVMAF 127
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGG 243
GL D+ F ++ LAD + ++ C +C K+A LR E E + IGG
Sbjct: 128 GLKNDFRNELFEGSKYLLLLADKIEEIKTICWYCSKKAIMVLRMVEGEPVYEGEQLQIGG 187
Query: 244 SDIYMPVCRQHY 255
++ Y+PVCR+HY
Sbjct: 188 NESYIPVCRKHY 199
>gi|161507265|ref|YP_001577219.1| thymidine kinase [Lactobacillus helveticus DPC 4571]
gi|260102569|ref|ZP_05752806.1| thymidine kinase [Lactobacillus helveticus DSM 20075]
gi|417006781|ref|ZP_11945165.1| thymidine kinase [Lactobacillus helveticus MTCC 5463]
gi|160348254|gb|ABX26928.1| Thymidine kinase [Lactobacillus helveticus DPC 4571]
gi|260083596|gb|EEW67716.1| thymidine kinase [Lactobacillus helveticus DSM 20075]
gi|328468715|gb|EGF39697.1| thymidine kinase [Lactobacillus helveticus MTCC 5463]
Length = 199
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 85 GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK---LPCCALTTL 141
G M +GKT +L+ +GR +A++ S D R G+ ++ + G+ +P A L
Sbjct: 9 GAMSSGKTIEILKVAHNYEAQGRKIALMTSGLDNRSGVGTVASRIGLHRKAIPITADMNL 68
Query: 142 SSFRQKFGS----DAYDQVDVIGIDEAQFFEDLYDF-CREAADHDGKTVIVAGLDGDYLR 196
++ +K S D ++ + IDEAQF + + C + D V+ GL D+
Sbjct: 69 YTYIEKMNSHDLADGKGKLACVLIDEAQFLKRHHVLECAKIVDEFNIPVMAFGLKNDFQN 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPVC 251
F +++ AD + ++ C +CG +A LR E + IGG + Y PVC
Sbjct: 129 HLFEGSENLLIFADKIEEMKTICHYCGHKATMNLRVNNGKPVYEGEQVQIGGDESYYPVC 188
Query: 252 RQHY 255
R HY
Sbjct: 189 RYHY 192
>gi|450066964|ref|ZP_21846296.1| thymidine kinase [Streptococcus mutans NLML9]
gi|449208398|gb|EMC08993.1| thymidine kinase [Streptococcus mutans NLML9]
Length = 191
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S+ DTR G + + G++
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSSLDTRDGFGVVASRIGMRREAVT 61
Query: 138 LTT-LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDY 194
+T + F + + + + I IDE+QF +++YD R D V+ GL D+
Sbjct: 62 ITDDMDIF--AYIENMFKKPYCILIDESQFLSQKNVYDLAR-IVDELDVPVMAFGLKNDF 118
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYM 248
F +++ LAD + ++ C+FC K+A LR TE + IGG++IY+
Sbjct: 119 QNHLFEGSRELLLLADKIEEIKTICQFCSKKATMVLR-TENGRPVYKGNQIQIGGNEIYI 177
Query: 249 PVCRQHY 255
PVCR+HY
Sbjct: 178 PVCRRHY 184
>gi|420237404|ref|ZP_14741875.1| thymidine kinase [Parascardovia denticolens IPLA 20019]
gi|391879675|gb|EIT88181.1| thymidine kinase [Parascardovia denticolens IPLA 20019]
Length = 193
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KLP 134
+++ G M +GK+ +L+ ++G++V ++ S DTR G +I + G+ +P
Sbjct: 2 AQLYYRYGTMNSGKSIEILKVAHNYEEQGKSVVLMTSAVDTRSGYGNISSRIGLTRQAVP 61
Query: 135 CCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
T + +F Q + Y + +DE QF +++YD R D V+ GL
Sbjct: 62 IHPDTDIVAFLQGLETKPY----CVLVDECQFLSKKNVYDLAR-VVDDLKVPVMCFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ + F ++ LAD + ++ C+FC K+A LR + E + IGG++ Y
Sbjct: 117 DFQNKLFEGSYHLLLLADKIEEIKTICQFCSKKATMVLRTEDGRPVYEGEQIQIGGNETY 176
Query: 248 MPVCRQHY 255
+PVCR HY
Sbjct: 177 IPVCRHHY 184
>gi|162446944|ref|YP_001620076.1| thymidine kinase [Acholeplasma laidlawii PG-8A]
gi|161985051|gb|ABX80700.1| thymidine kinase [Acholeplasma laidlawii PG-8A]
Length = 197
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS-IVTHDGVKLPC 135
+G I V+ GPMFAGKT L+RR + +N V K D RY + IV+H +
Sbjct: 7 NGFIEVVCGPMFAGKTEELIRRAKRLKYAKQNYLVFKPVIDNRYSSKAEIVSHSLLTENA 66
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDY 194
+ + D ++ + IDEAQFF +D+ + AD G VI+ GLD D+
Sbjct: 67 ILIEKSKDILEHMN----DSIEAVIIDEAQFFDQDIVEIADRLAD-SGVRVIIGGLDRDF 121
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYM 248
FG + ++ +A+ V KLTA C G A T R + +G SD Y
Sbjct: 122 KGEPFGPMPQLLAIAEFVVKLTAICPKTGTPATRTQRIINGKPARMDDPLIVVGASDSYE 181
Query: 249 PVCRQ-HYVSGQ 259
P R H V G+
Sbjct: 182 PRSRHAHEVPGK 193
>gi|156564177|ref|YP_001429687.1| thymidine kinase [Bacillus phage 0305phi8-36]
gi|154622874|gb|ABS83754.1| thymidine kinase [Bacillus phage 0305phi8-36]
Length = 185
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + V +G MF+GK+ L+R+ + G V V K D RY +VTH G + C
Sbjct: 5 GRLDVEMGGMFSGKSEELIRKCRRAEIAGNKVQVFKPKLDDRYSDTEVVTHYGRSIECEV 64
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+T ++ D V+ IDE QFF+D +Y+ G VIVAGLD
Sbjct: 65 VTNSQDLYRRVQPDT----SVVAIDEVQFFDDRIYEIIMHLKRDKGIDVIVAGLDMWASG 120
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
V + +++ V K A C+ G+ A+ + E+ L+GG+D Y+ + + Y+
Sbjct: 121 EPVMIVAKLAAVSNDVQKFHAVCQDTGEDAYISYCTVEKDGDVLVGGTDKYIALSEKAYL 180
>gi|389848303|ref|YP_006350542.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
gi|388245609|gb|AFK20555.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
Length = 179
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT LLRR++ G+ ++V K D RYG ++ TH G + +
Sbjct: 1 MFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDASVVPSEGDGVW 60
Query: 147 KFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
+ + + DV+ IDEA FF +L C + A DGK V+V+G D + F V +
Sbjct: 61 QI-VEELNGEDVVAIDEANFFSAELVGVCEQLA-ADGKRVVVSGTDQTFRAEPFNPVPQL 118
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELIGGSDIYMPVCRQ 253
+ LA+ V KL A C CG+ A R + + T L+G + Y CR
Sbjct: 119 MALAEYVDKLQAICTICGEPATRNQRLIDGEPAHMDDPTILVGAEESYEARCRN 172
>gi|336064200|ref|YP_004559059.1| thymidine kinase [Streptococcus pasteurianus ATCC 43144]
gi|334282400|dbj|BAK29973.1| thymidine kinase [Streptococcus pasteurianus ATCC 43144]
Length = 196
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G++ A
Sbjct: 5 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTREGYGVVSSRIGMRRKAIA 64
Query: 138 LTT---LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+T + +F Q+ Y + IDE QF + +YD R D D V+ GL
Sbjct: 65 ITEEMDIFAFIQELPEKPY----CVLIDECQFLTKKHVYDLARVVDDLD-VPVMAFGLKN 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR E IGG++ Y
Sbjct: 120 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTENGKPVYEGNQIQIGGNETY 179
Query: 248 MPVCRQHYVS 257
+PVCR+HY +
Sbjct: 180 IPVCRKHYFN 189
>gi|403515348|ref|YP_006656168.1| thymidine kinase [Lactobacillus helveticus R0052]
gi|403080786|gb|AFR22364.1| thymidine kinase [Lactobacillus helveticus R0052]
Length = 199
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 85 GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK---LPCCALTTL 141
G M +GKT +L+ +GR +A++ S D R G+ ++ + G+ +P A L
Sbjct: 9 GAMSSGKTIEILKVAHNYEAQGRKIALMTSGLDNRSGVGTVASRIGLHRKAIPITADMNL 68
Query: 142 SSFRQKFGS----DAYDQVDVIGIDEAQFFEDLYDF-CREAADHDGKTVIVAGLDGDYLR 196
++ +K S D ++ + IDEAQF + + C + D V+ GL D+
Sbjct: 69 FTYIEKMNSHDLADGKGKLACVLIDEAQFLKRHHVLECAKIVDEFNIPVMAFGLKNDFQN 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPVC 251
F +++ AD + ++ C +CG +A LR E + IGG + Y PVC
Sbjct: 129 HLFEGSENLLIFADKIEEMKTICHYCGHKATMNLRVNNGKPVYEGEQVQIGGDESYYPVC 188
Query: 252 RQHY 255
R HY
Sbjct: 189 RYHY 192
>gi|281491059|ref|YP_003353039.1| thymidine kinase [Lactococcus lactis subsp. lactis KF147]
gi|281374817|gb|ADA64337.1| Thymidine kinase [Lactococcus lactis subsp. lactis KF147]
gi|374672589|dbj|BAL50480.1| thymidine kinase [Lactococcus lactis subsp. lactis IO-1]
Length = 189
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 9/190 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GK+ +L+ ++G+ V ++ S+ DTR G+ ++ + G+K A
Sbjct: 2 AQLYFKYGTMNSGKSIEILKVAHNYEEQGKPVLLMTSSLDTRAGVGTVASRIGMKAEAVA 61
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S S + V+ IDEAQF + +YDF R D V+ GL D+
Sbjct: 62 IDEEMSVFDYVNSLSAKPFCVL-IDEAQFLNKKHVYDFAR-VVDELNVPVMAFGLKNDFR 119
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPV 250
F ++ LAD + ++ C +C K+A +R + E + IGG++ Y+PV
Sbjct: 120 NELFEGSKYLLLLADKIEEIKTICWYCSKKATMVIRTIDGKPVYEGEQLQIGGNETYIPV 179
Query: 251 CRQHYVSGQV 260
CR+HY ++
Sbjct: 180 CRKHYFKPEI 189
>gi|109892478|sp|Q2NIM1.2|KITH_AYWBP RecName: Full=Thymidine kinase
Length = 209
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL-DSIVTHDGVKLPC 135
G I VI GPMFAGKT +L++R + + + K D RY + + IV+H+ +P
Sbjct: 8 QGFIEVICGPMFAGKTESLIQRRNKALKLKKKILSFKPRIDDRYSVKEEIVSHNRNNIP- 66
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
L + + +++V+ IDE+QF ++ + + VI++GL+ D+
Sbjct: 67 ---AILIDKSKDILTFITPEINVVIIDESQFLDNDIIAIVDYLANCNIEVIISGLELDFC 123
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
+ FG + ++ +AD+VTKLT+ C G +A T R E + L+GG + + P
Sbjct: 124 GKPFGPMPYLLAIADTVTKLTSICAISGGKANRTQRLIEGKPAQSNEPVVLVGGKEYHEP 183
Query: 250 VCRQHY 255
CR+H+
Sbjct: 184 RCRKHH 189
>gi|306833418|ref|ZP_07466545.1| thymidine kinase [Streptococcus bovis ATCC 700338]
gi|304424188|gb|EFM27327.1| thymidine kinase [Streptococcus bovis ATCC 700338]
Length = 193
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G++ A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTREGYGVVSSRIGMRRKAIA 61
Query: 138 LTT---LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+T + +F Q+ Y + IDE QF + +YD R D D V+ GL
Sbjct: 62 ITEEMDIFAFIQELPEKPY----CVLIDECQFLTKKHVYDLARVVDDLD-VPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR E IGG++ Y
Sbjct: 117 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTENGKPVYEGNQIQIGGNETY 176
Query: 248 MPVCRQHYVS 257
+PVCR+HY +
Sbjct: 177 IPVCRKHYFN 186
>gi|410029462|ref|ZP_11279298.1| thymidine kinase [Marinilabilia sp. AK2]
Length = 169
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 5/167 (2%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR+ + V + K D RY +V+H+ + +T +F +
Sbjct: 1 MFSGKTEELIRRLNRALIAKQKVEIFKPTVDKRYHEFDVVSHNENAIR----STPVNFAE 56
Query: 147 KFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDII 206
A D DV+GIDE QFF++ + + GK VI+AGLD D+ F + ++
Sbjct: 57 DIILLAGD-CDVVGIDEVQFFDNRIVHVAKVLANSGKRVILAGLDMDFEGNPFEPMPQLL 115
Query: 207 PLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+A+ VTK+ A C CG A ++ R T + L+G + Y CR+
Sbjct: 116 AVAEYVTKVHAICMKCGDLAAYSFRLTATKEKVLLGEKESYEARCRK 162
>gi|385814149|ref|YP_005850542.1| thymidine kinase [Lactobacillus helveticus H10]
gi|323466868|gb|ADX70555.1| Thymidine kinase [Lactobacillus helveticus H10]
Length = 213
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 85 GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK---LPCCALTTL 141
G M +GKT +L+ +GR +A++ S D R G+ ++ + G+ +P A L
Sbjct: 23 GAMSSGKTIEILKVAHNYEAQGRKIALMTSGLDNRSGVGTVASRIGLHRKAIPITADMNL 82
Query: 142 SSFRQKFGS----DAYDQVDVIGIDEAQFFEDLYDF-CREAADHDGKTVIVAGLDGDYLR 196
++ +K S D ++ + IDEAQF + + C + D V+ GL D+
Sbjct: 83 FTYIEKMNSHDLADGKGKLACVLIDEAQFLKRHHVLECAKIVDEFNIPVMAFGLKNDFQN 142
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPVC 251
F +++ AD + ++ C +CG +A LR E + IGG + Y PVC
Sbjct: 143 HLFEGSENLLIFADKIEEMKTICHYCGHKATMNLRVNNGKPVYEGEQVQIGGDESYYPVC 202
Query: 252 RQHY 255
R HY
Sbjct: 203 RYHY 206
>gi|227540631|ref|ZP_03970680.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33300]
gi|227239517|gb|EEI89532.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33300]
Length = 146
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 111 VIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED- 169
+ K + D RY +V+HD + ++ S+ +D V+GIDEAQFF+D
Sbjct: 3 IFKPSVDIRYDEQRVVSHDQNSISSTPVSNSSAILL-LSADTR----VVGIDEAQFFDDE 57
Query: 170 LYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFT 229
L + C + A+ G VIVAGLD D+ + FG + ++ +A+ VTK+ A C CG A ++
Sbjct: 58 LPNVCVQLANK-GLRVIVAGLDMDFKGKPFGPIPALMAVAEHVTKVHAVCVRCGAPANYS 116
Query: 230 LRKTEETKTELIGGSDIYMPVCRQHY 255
R T+ K L+G + Y P CR Y
Sbjct: 117 YRLTDNDKQVLLGEKESYEPRCRSCY 142
>gi|218549067|ref|YP_002382858.1| thymidine kinase [Escherichia fergusonii ATCC 35469]
gi|218356608|emb|CAQ89233.1| thymidine kinase/deoxyuridine kinase [Escherichia fergusonii ATCC
35469]
Length = 217
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V SP +++ M AGK+T LL+ ++G V + D R+G + + G+
Sbjct: 8 VLSPMAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLS 67
Query: 133 LPCCALTTLSS-FRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAG 189
P SS F + +A VD + +DE QF + +YD E D V+ G
Sbjct: 68 SPARLFNQNSSLFEEIRAENAKQPVDCVLVDECQFLTRQQVYDLS-EVVDQLDIPVLCYG 126
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETK------TELIGG 243
L D+ FG ++ +D + +L C FCG++A LR +E + +IGG
Sbjct: 127 LRTDFRGELFGGSQYLLAWSDKLVELKTIC-FCGRKASMVLRLDQEGRPYNEGEQVVIGG 185
Query: 244 SDIYMPVCRQHY 255
++ Y+ VCR+HY
Sbjct: 186 NERYVSVCRKHY 197
>gi|85057885|ref|YP_456801.1| thymidine kinase [Aster yellows witches'-broom phytoplasma AYWB]
gi|84789990|gb|ABC65722.1| thymidine kinase [Aster yellows witches'-broom phytoplasma AYWB]
Length = 233
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGL-DSIVTHDGVKLPC 135
G I VI GPMFAGKT +L++R + + + K D RY + + IV+H+ +P
Sbjct: 32 QGFIEVICGPMFAGKTESLIQRRNKALKLKKKILSFKPRIDDRYSVKEEIVSHNRNNIP- 90
Query: 136 CALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYL 195
L + + +++V+ IDE+QF ++ + + VI++GL+ D+
Sbjct: 91 ---AILIDKSKDILTFITPEINVVIIDESQFLDNDIIAIVDYLANCNIEVIISGLELDFC 147
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
+ FG + ++ +AD+VTKLT+ C G +A T R E + L+GG + + P
Sbjct: 148 GKPFGPMPYLLAIADTVTKLTSICAISGGKANRTQRLIEGKPAQSNEPVVLVGGKEYHEP 207
Query: 250 VCRQHY 255
CR+H+
Sbjct: 208 RCRKHH 213
>gi|452995542|emb|CCQ92815.1| Thymidine kinase [Clostridium ultunense Esp]
Length = 194
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G++ V G MF+GKT++L + ++ K D+R+ + IVTHD +
Sbjct: 6 GKLIVHTGSMFSGKTSSLEKDVKRFNIAKYKTIAFKPAIDSRFRRNEIVTHDLTSMNAIL 65
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE----DLYDFCREAADHDGKTVIVAGLDGD 193
+ ++ + + DVI IDE QF D+ + D TVIVAGLD D
Sbjct: 66 VDDINQLIEYCNEL---KPDVIAIDEIQFLGGKVGDIIAGINGLLEKDF-TVIVAGLDMD 121
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ + F V +++P+AD + K A C CG + + RK+E+ + IG SD Y P+CR+
Sbjct: 122 FTGKPFEIVKELMPIADYLYKHHAVCVRCGNDGWVSHRKSEDQERIKIGASDEYEPLCRK 181
Query: 254 HYV 256
++
Sbjct: 182 CFL 184
>gi|402551326|ref|YP_006600045.1| thymidine kinase [Mycoplasma genitalium M6282]
gi|401800021|gb|AFQ03337.1| thymidine kinase [Mycoplasma genitalium M6282]
Length = 213
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
+ S + G VI GPMF+GKT LL +I+ +V + K DTR + + + +
Sbjct: 5 QPSFQAKKGWTEVICGPMFSGKTEKLLHKIKRWKIAKISVVIFKPIIDTRQ-TNIVKSRN 63
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQV-----DVIGIDEAQFFEDLYDFCREAADHDGKT 184
G A+T S F + YD + ++ IDEAQFF + + G
Sbjct: 64 GEYDQ--AITINSPF------EIYDHLVDKNYQIVAIDEAQFFSNEIIEVVTTLNEIGTN 115
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE---LI 241
VI++GLD D+ FG + ++ +AD V KL A C CG A T R + + LI
Sbjct: 116 VIISGLDTDFRAEPFGCIPQLLAIADVVNKLDAICNVCGSLAQRTQRLVNKNTNDNLVLI 175
Query: 242 GGSDIYMPVCRQHY 255
G ++ Y C+ H+
Sbjct: 176 GDAEAYEARCKLHH 189
>gi|306831306|ref|ZP_07464466.1| thymidine kinase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|374337910|ref|YP_005094619.1| thymidine kinase [Streptococcus macedonicus ACA-DC 198]
gi|386337683|ref|YP_006033852.1| thymidine kinase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|304426542|gb|EFM29654.1| thymidine kinase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|334280319|dbj|BAK27893.1| thymidine kinase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|372284019|emb|CCF02254.1| Thymidine kinase [Streptococcus macedonicus ACA-DC 198]
Length = 196
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G++ A
Sbjct: 5 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGYGVVSSRIGMRRKAIA 64
Query: 138 LTT---LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+T + +F Q+ Y + IDE QF + +YD R D D V+ GL
Sbjct: 65 ITEEMDIFAFIQELPEKPY----CVLIDECQFLTKKHVYDLARVVDDLD-VPVMAFGLKN 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR E IGG++ Y
Sbjct: 120 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTENGKPVYEGNQIQIGGNETY 179
Query: 248 MPVCRQHYVSGQVVVE 263
+PVCR+HY + + E
Sbjct: 180 IPVCRKHYFNPMISKE 195
>gi|116511382|ref|YP_808598.1| thymidine kinase [Lactococcus lactis subsp. cremoris SK11]
gi|125623420|ref|YP_001031903.1| thymidine kinase [Lactococcus lactis subsp. cremoris MG1363]
gi|385838984|ref|YP_005876614.1| thymidine kinase [Lactococcus lactis subsp. cremoris A76]
gi|389853745|ref|YP_006355989.1| thymidine kinase [Lactococcus lactis subsp. cremoris NZ9000]
gi|414073825|ref|YP_006999042.1| thymidine kinase [Lactococcus lactis subsp. cremoris UC509.9]
gi|116107036|gb|ABJ72176.1| thymidine kinase [Lactococcus lactis subsp. cremoris SK11]
gi|124492228|emb|CAL97157.1| Tdk protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300070167|gb|ADJ59567.1| thymidine kinase [Lactococcus lactis subsp. cremoris NZ9000]
gi|358750212|gb|AEU41191.1| Thymidine kinase [Lactococcus lactis subsp. cremoris A76]
gi|413973745|gb|AFW91209.1| thymidine kinase [Lactococcus lactis subsp. cremoris UC509.9]
Length = 189
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 9/190 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GK+ +L+ ++G+ V ++ S+ DTR G+ ++ + G+K A
Sbjct: 2 AQLYFKYGTMNSGKSIEILKVAHNYEEQGKPVLLMTSSLDTRAGVGTVASRIGMKAEAIA 61
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S S + V+ IDEAQF + +YDF R D V+ GL D+
Sbjct: 62 IDDKMSVFDYVNSLSAKPFCVL-IDEAQFLNKKHVYDFAR-VVDELNVPVMAFGLKNDFR 119
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPV 250
F ++ LAD + ++ C +C K+A +R + E + IGG++ Y+PV
Sbjct: 120 NELFEGSKYLLLLADKIEEIKTICWYCSKKATMVIRTIDGKPVYEGEQLQIGGNETYIPV 179
Query: 251 CRQHYVSGQV 260
CR+HY ++
Sbjct: 180 CRKHYFKPEI 189
>gi|12044884|ref|NP_072694.1| thymidine kinase [Mycoplasma genitalium G37]
gi|255660162|ref|ZP_05405571.1| thymidine kinase [Mycoplasma genitalium G37]
gi|402550830|ref|YP_006599550.1| thymidine kinase [Mycoplasma genitalium M2321]
gi|402551816|ref|YP_006600534.1| thymidine kinase [Mycoplasma genitalium M6320]
gi|1346381|sp|P47280.1|KITH_MYCGE RecName: Full=Thymidine kinase
gi|3844644|gb|AAC71250.1| thymidine kinase [Mycoplasma genitalium G37]
gi|166078843|gb|ABY79461.1| thymidine kinase [synthetic Mycoplasma genitalium JCVI-1.0]
gi|401799525|gb|AFQ02842.1| thymidine kinase [Mycoplasma genitalium M2321]
gi|401800511|gb|AFQ03826.1| thymidine kinase [Mycoplasma genitalium M6320]
Length = 213
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
+ S + G VI GPMF+GKT LL +I+ +V + K DTR + + + +
Sbjct: 5 QPSFQTKKGWTEVICGPMFSGKTEKLLHKIKRWKIAKISVVIFKPIIDTRQ-TNIVKSRN 63
Query: 130 GVKLPCCALTTLSSFRQKFGSDAYDQV-----DVIGIDEAQFFEDLYDFCREAADHDGKT 184
G A+T S F + YD + ++ IDEAQFF + + G
Sbjct: 64 GEYDQ--AITINSPF------EIYDHLVDKNYQIVAIDEAQFFSNEIIEVVTTLNEIGTN 115
Query: 185 VIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE---LI 241
VI++GLD D+ FG + ++ +AD V KL A C CG A T R + + LI
Sbjct: 116 VIISGLDTDFRAEPFGCIPQLLAIADVVNKLDAICNVCGSLAQRTQRLVNKNTNDNLVLI 175
Query: 242 GGSDIYMPVCRQHY 255
G ++ Y C+ H+
Sbjct: 176 GDAEAYEARCKLHH 189
>gi|15672575|ref|NP_266749.1| thymidine kinase [Lactococcus lactis subsp. lactis Il1403]
gi|385830086|ref|YP_005867899.1| thymidine kinase [Lactococcus lactis subsp. lactis CV56]
gi|418036903|ref|ZP_12675294.1| Thymidine kinase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|38258238|sp|Q9CHX5.1|KITH_LACLA RecName: Full=Thymidine kinase
gi|12723485|gb|AAK04691.1|AE006292_11 thymidine kinase [Lactococcus lactis subsp. lactis Il1403]
gi|326406094|gb|ADZ63165.1| thymidine kinase [Lactococcus lactis subsp. lactis CV56]
gi|354695048|gb|EHE94670.1| Thymidine kinase [Lactococcus lactis subsp. cremoris CNCM I-1631]
Length = 189
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GK+ +L+ ++G+ V ++ S+ DTR G+ ++ + G+K A
Sbjct: 2 AQLYFKYGTMNSGKSIEILKVAHNYEEQGKPVLLMTSSLDTRAGVGTVASRIGMKAEAVA 61
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+ S S V+ IDEAQF + +YDF R D V+ GL D+
Sbjct: 62 IDEEMSVFDYVNSLPAKPFCVL-IDEAQFLNKKHVYDFAR-VVDELNVPVMAFGLKNDFR 119
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPV 250
F ++ LAD + ++ C +C K+A +R + E + IGG++ Y+PV
Sbjct: 120 NELFEGSKYLLLLADKIEEIKTICWYCSKKATMVIRTIDGKPVYEGEQLQIGGNETYIPV 179
Query: 251 CRQHYVSGQV 260
CR+HY ++
Sbjct: 180 CRKHYFKPEI 189
>gi|397649746|ref|YP_006490273.1| thymidine kinase [Streptococcus mutans GS-5]
gi|392603315|gb|AFM81479.1| thymidine kinase [Streptococcus mutans GS-5]
Length = 191
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S+ DTR G + + G++
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSSLDTRDGFGVVASRIGMRREAVT 61
Query: 138 LTT-LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDY 194
+T + F + + +++ I IDE+QF +++YD R D V+ GL D+
Sbjct: 62 ITDDMDIF--AYIENMFEKPYCILIDESQFLSQKNVYDLAR-IVDELDVPVMAFGLKNDF 118
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL-----IGGSDIYMP 249
F +++ LAD + ++ C+FC K+A LR + IGG++ Y+P
Sbjct: 119 QNHLFEGSRELLLLADKIEEIKTICQFCSKKATMVLRTENGRPVYMGNQIQIGGNETYIP 178
Query: 250 VCRQHY 255
VCR+HY
Sbjct: 179 VCRRHY 184
>gi|430836574|ref|ZP_19454553.1| hypothetical protein OGK_04074 [Enterococcus faecium E0680]
gi|431206466|ref|ZP_19500782.1| hypothetical protein OIK_04225 [Enterococcus faecium E1620]
gi|430488374|gb|ELA65056.1| hypothetical protein OGK_04074 [Enterococcus faecium E0680]
gi|430571228|gb|ELB10154.1| hypothetical protein OIK_04225 [Enterococcus faecium E1620]
Length = 191
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 85 GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSF 144
G M +GK+ LL+ ++G+ V ++ S DTR G + + GV P A+T+
Sbjct: 9 GTMNSGKSIELLKVAHNYEEQGKRVIIMTSAIDTRSGFGKVESRIGVSKPAIAITSEMDV 68
Query: 145 RQKFGS--DAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
+ D Y++VD I +DE+QF E++ D + + VI GL D+ F
Sbjct: 69 YGELVEIIDQYEKVDCILVDESQFLSRENIIDLSLIVMNEE-VPVICYGLKNDFQNNLFK 127
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPVCRQHY 255
++ AD + ++ C FC K+A R + + ++GG++ Y+ VCR HY
Sbjct: 128 GSEALLTFADKIEEIKTICHFCNKKAVMNARIVDGIPVYSGEQIVVGGNEDYLSVCRNHY 187
>gi|288905235|ref|YP_003430457.1| thymidine kinase [Streptococcus gallolyticus UCN34]
gi|325978211|ref|YP_004287927.1| thymidine kinase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
gi|288731961|emb|CBI13526.1| thymidine kinase [Streptococcus gallolyticus UCN34]
gi|325178139|emb|CBZ48183.1| tdk [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 193
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G++ A
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGYGVVSSRIGMRRKAIA 61
Query: 138 LTT---LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+T + +F Q+ Y + IDE QF + +YD R D D V+ GL
Sbjct: 62 ITEEMDIFAFIQELPEKPY----CVLIDECQFLTKKHVYDLARVVDDLD-VPVMAFGLKN 116
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR E IGG++ Y
Sbjct: 117 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTENGKPVYEGNQIQIGGNETY 176
Query: 248 MPVCRQHYVSGQVVVE 263
+PVCR+HY + + E
Sbjct: 177 IPVCRKHYFNPMISKE 192
>gi|379705188|ref|YP_005203647.1| thymidine kinase [Streptococcus infantarius subsp. infantarius
CJ18]
gi|374681887|gb|AEZ62176.1| thymidine kinase [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 196
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S DTR G + + G++ A
Sbjct: 5 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGYGVVSSRIGMRRKAIA 64
Query: 138 LTT---LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDG 192
+T + +F Q+ Y + IDE QF + +YD R D D V+ GL
Sbjct: 65 ITEEMDIFAFIQELPEKPY----CVLIDECQFLTKKHVYDLARVVDDLD-VPVMAFGLKN 119
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIY 247
D+ F ++ LAD + ++ C+FC K+A LR E IGG++ Y
Sbjct: 120 DFQNELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTENGKPVYEGNQIQIGGNETY 179
Query: 248 MPVCRQHY 255
+PVCR+HY
Sbjct: 180 IPVCRKHY 187
>gi|193216012|ref|YP_001997211.1| thymidine kinase [Chloroherpeton thalassium ATCC 35110]
gi|193089489|gb|ACF14764.1| Thymidine kinase [Chloroherpeton thalassium ATCC 35110]
Length = 170
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR++ G+ + K D RY IV+H ++ ++
Sbjct: 1 MFSGKTEELIRRLRRAQIAGQKTEIFKPAIDNRYSETEIVSHSEFRISSRVVSHSKEIML 60
Query: 147 KFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDI 205
DV+GIDEAQFF E + D C E+ ++GK VIVAGLD D+ + FG + +
Sbjct: 61 H-----SQNADVVGIDEAQFFDEGIVDVC-ESLANNGKRVIVAGLDLDFRGKPFGPMPQL 114
Query: 206 IPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
+ +A+ VTK A C G A T R T +G ++ Y
Sbjct: 115 LAVAEYVTKTLAVCMKSGLPASRTQRIAPGTDLIDVGHTNKY 156
>gi|254838351|gb|ACT83386.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 117
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 157 DVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLT 216
D + +DE QFF DLY+ + GK VIVA LDGD++++ F V ++P+AD + KLT
Sbjct: 1 DAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLT 59
Query: 217 ARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
A C C R A FT+R ++ T +GG++ Y VCR
Sbjct: 60 AVCMKCKMRDAPFTVRISQGTDLVQVGGAESYQAVCR 96
>gi|254838357|gb|ACT83389.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 134
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 154 DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVT 213
++ D + +DE QFF DLY+ + GK VIVA LDGD++++ F V ++P+AD +
Sbjct: 13 EEYDAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQPFKQVTALVPMADKLD 71
Query: 214 KLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
KLTA C C R A FT+R ++ T +GG++ Y VCR
Sbjct: 72 KLTAVCMKCKMRDAPFTVRISQGTDLVQVGGAESYQAVCR 111
>gi|387786130|ref|YP_006251226.1| thymidine kinase [Streptococcus mutans LJ23]
gi|379132531|dbj|BAL69283.1| thymidine kinase [Streptococcus mutans LJ23]
Length = 194
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S+ DTR G + + G++
Sbjct: 5 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSSLDTRDGFGVVASRIGMRREAVT 64
Query: 138 LTT-LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDY 194
+T + F + + +++ I IDE+QF +++YD R D V+ GL D+
Sbjct: 65 ITDDMDIF--AYIENMFEKPYCILIDESQFLSQKNVYDLAR-IVDELDVPVMAFGLKNDF 121
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYM 248
F +++ LAD + ++ C+FC K+A LR TE + IGG++ Y+
Sbjct: 122 QNHLFEGSRELLLLADKIEEIKTICQFCSKKATMVLR-TENGRPVYKGNQIQIGGNETYI 180
Query: 249 PVCRQHY 255
PVCR+HY
Sbjct: 181 PVCRRHY 187
>gi|449875600|ref|ZP_21782301.1| thymidine kinase [Streptococcus mutans S1B]
gi|449882030|ref|ZP_21784727.1| thymidine kinase [Streptococcus mutans SA38]
gi|449891143|ref|ZP_21787747.1| thymidine kinase [Streptococcus mutans SF12]
gi|449918585|ref|ZP_21797442.1| thymidine kinase [Streptococcus mutans 1SM1]
gi|449932016|ref|ZP_21802607.1| thymidine kinase [Streptococcus mutans 3SN1]
gi|449937469|ref|ZP_21804585.1| thymidine kinase [Streptococcus mutans 2ST1]
gi|449947902|ref|ZP_21807695.1| thymidine kinase [Streptococcus mutans 11SSST2]
gi|449965768|ref|ZP_21812002.1| thymidine kinase [Streptococcus mutans 15VF2]
gi|449975113|ref|ZP_21815638.1| thymidine kinase [Streptococcus mutans 11VS1]
gi|449982427|ref|ZP_21818281.1| thymidine kinase [Streptococcus mutans 5SM3]
gi|449988807|ref|ZP_21820762.1| thymidine kinase [Streptococcus mutans NVAB]
gi|449994909|ref|ZP_21822803.1| thymidine kinase [Streptococcus mutans A9]
gi|450009832|ref|ZP_21828358.1| thymidine kinase [Streptococcus mutans A19]
gi|450023188|ref|ZP_21830452.1| thymidine kinase [Streptococcus mutans U138]
gi|450046398|ref|ZP_21838912.1| thymidine kinase [Streptococcus mutans N34]
gi|450086417|ref|ZP_21853637.1| thymidine kinase [Streptococcus mutans NV1996]
gi|450105243|ref|ZP_21859755.1| thymidine kinase [Streptococcus mutans SF14]
gi|450122406|ref|ZP_21866747.1| thymidine kinase [Streptococcus mutans ST6]
gi|450154341|ref|ZP_21877691.1| thymidine kinase [Streptococcus mutans 21]
gi|450180497|ref|ZP_21887273.1| thymidine kinase [Streptococcus mutans 24]
gi|449160210|gb|EMB63488.1| thymidine kinase [Streptococcus mutans 1SM1]
gi|449161883|gb|EMB65053.1| thymidine kinase [Streptococcus mutans 3SN1]
gi|449164264|gb|EMB67331.1| thymidine kinase [Streptococcus mutans 2ST1]
gi|449168081|gb|EMB70919.1| thymidine kinase [Streptococcus mutans 11SSST2]
gi|449170898|gb|EMB73585.1| thymidine kinase [Streptococcus mutans 15VF2]
gi|449174899|gb|EMB77357.1| thymidine kinase [Streptococcus mutans 5SM3]
gi|449177378|gb|EMB79681.1| thymidine kinase [Streptococcus mutans 11VS1]
gi|449183465|gb|EMB85448.1| thymidine kinase [Streptococcus mutans NVAB]
gi|449184831|gb|EMB86744.1| thymidine kinase [Streptococcus mutans A9]
gi|449190731|gb|EMB92285.1| thymidine kinase [Streptococcus mutans A19]
gi|449193890|gb|EMB95260.1| thymidine kinase [Streptococcus mutans U138]
gi|449198840|gb|EMB99932.1| thymidine kinase [Streptococcus mutans N34]
gi|449219560|gb|EMC19523.1| thymidine kinase [Streptococcus mutans NV1996]
gi|449224844|gb|EMC24468.1| thymidine kinase [Streptococcus mutans SF14]
gi|449227983|gb|EMC27373.1| thymidine kinase [Streptococcus mutans ST6]
gi|449237948|gb|EMC36743.1| thymidine kinase [Streptococcus mutans 21]
gi|449248259|gb|EMC46518.1| thymidine kinase [Streptococcus mutans 24]
gi|449250584|gb|EMC48637.1| thymidine kinase [Streptococcus mutans SA38]
gi|449253762|gb|EMC51704.1| thymidine kinase [Streptococcus mutans S1B]
gi|449256838|gb|EMC54650.1| thymidine kinase [Streptococcus mutans SF12]
Length = 191
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S+ DTR G + + G++
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSSLDTRDGFGVVASRIGMRREAVT 61
Query: 138 LTT-LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDY 194
+T + F + + +++ I IDE+QF +++YD R D V+ GL D+
Sbjct: 62 ITDDMDIF--AYIENMFEKPYCILIDESQFLSQKNVYDLAR-IVDELDVPVMAFGLKNDF 118
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYM 248
F +++ LAD + ++ C+FC K+A LR TE + IGG++ Y+
Sbjct: 119 QNHLFEGSRELLLLADKIEEIKTICQFCSKKATMVLR-TENGRPVYKGNQIQIGGNETYI 177
Query: 249 PVCRQHY 255
PVCR+HY
Sbjct: 178 PVCRRHY 184
>gi|154125632|gb|ABS59381.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125634|gb|ABS59382.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125636|gb|ABS59383.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125638|gb|ABS59384.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125640|gb|ABS59385.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125642|gb|ABS59386.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125644|gb|ABS59387.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125646|gb|ABS59388.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125648|gb|ABS59389.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125650|gb|ABS59390.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125652|gb|ABS59391.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125654|gb|ABS59392.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125656|gb|ABS59393.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125658|gb|ABS59394.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125660|gb|ABS59395.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125662|gb|ABS59396.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125664|gb|ABS59397.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125666|gb|ABS59398.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125668|gb|ABS59399.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125670|gb|ABS59400.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125672|gb|ABS59401.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125674|gb|ABS59402.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125676|gb|ABS59403.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|207059676|dbj|BAG71887.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 136
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 154 DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVT 213
++ D + +DE QFF DLY+ + GK VIVA LDGD++++ F V ++P+AD +
Sbjct: 11 EEYDAVAVDEGQFFPDLYEGVVQLLTA-GKYVIVAALDGDFMQQPFKQVTALVPMADKLD 69
Query: 214 KLTARCEFCGKR-AFFTLRKTEETKTELIGGSDIYMPVCR 252
KLTA C C R A FT+R ++ T +GG++ Y VCR
Sbjct: 70 KLTAVCMKCKMRDAPFTVRISQGTDLVQVGGAESYQAVCR 109
>gi|440751172|ref|ZP_20930407.1| Thymidine kinase [Mariniradius saccharolyticus AK6]
gi|436480211|gb|ELP36463.1| Thymidine kinase [Mariniradius saccharolyticus AK6]
Length = 168
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 87 MFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSFRQ 146
MF+GKT L+RR+ + V + K + D RY +V+H+ + S
Sbjct: 1 MFSGKTEELIRRLNRALIARQKVEIFKPSIDKRYHDFDVVSHNE--------NAIRSTPV 52
Query: 147 KFGSDAY---DQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVI 203
F D DV+GIDE QFF+ + + GK VI+AGLD D+ + F +
Sbjct: 53 NFADDIILLAGDCDVVGIDEVQFFDQRIVEVADILANAGKRVILAGLDMDFAGKPFEPMP 112
Query: 204 DIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
++ +A+ VTK+ A C CG A ++ R T L+G D Y CR+
Sbjct: 113 QLLAIAEYVTKVHAICMKCGNLASYSYRLTAAQDKVLLGEKDSYEARCRK 162
>gi|450028513|ref|ZP_21832219.1| thymidine kinase [Streptococcus mutans G123]
gi|449195598|gb|EMB96912.1| thymidine kinase [Streptococcus mutans G123]
Length = 191
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
+++ G M +GKT +L+ ++G+ V ++ S+ DTR G + + G++
Sbjct: 2 AQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSSLDTRDGFGVVASRIGMRREAVT 61
Query: 138 LTT-LSSFRQKFGSDAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDY 194
+T + F + + + + I IDE+QF +++YD R D V+ GL D+
Sbjct: 62 ITDDMDIF--AYIENMFKKPYCILIDESQFLSQKNVYDLAR-IVDELNVPVMAFGLKNDF 118
Query: 195 LRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTEL------IGGSDIYM 248
F +++ LAD + ++ C+FC K+A LR TE + IGG++ Y+
Sbjct: 119 QNHLFEGSRELLLLADKIEEIKTICQFCSKKATMVLR-TENGRPVYKGNQIQIGGNETYI 177
Query: 249 PVCRQHY 255
PVCR+HY
Sbjct: 178 PVCRRHY 184
>gi|431379077|ref|ZP_19510696.1| hypothetical protein OIS_04043 [Enterococcus faecium E1627]
gi|430582493|gb|ELB20916.1| hypothetical protein OIS_04043 [Enterococcus faecium E1627]
Length = 191
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 85 GPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTLSSF 144
G M +GK+ LL+ ++G+ V ++ S DTR G + + GV P A+T+
Sbjct: 9 GTMNSGKSIELLKVAHNYEEQGKRVIIMTSAIDTRSGFGKVESRIGVSKPAIAITSEMDV 68
Query: 145 RQKFGS--DAYDQVDVIGIDEAQFF--EDLYDFCREAADHDGKTVIVAGLDGDYLRRSFG 200
+ D Y++VD I +DE+QF E++ D + + VI GL D+ F
Sbjct: 69 YGELVEIIDQYEKVDCILVDESQFLSRENIIDLSLIVMNEE-VPVICYGLKNDFQNNLFK 127
Query: 201 SVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE-----ETKTELIGGSDIYMPVCRQHY 255
++ AD + ++ C FC K+A R + + ++GG++ Y+ VCR HY
Sbjct: 128 GSEVLLTFADKIEEIKTICHFCNKKAVMNARIVDGIPVYSGEQIVVGGNEDYLSVCRNHY 187
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,118,661,276
Number of Sequences: 23463169
Number of extensions: 165048093
Number of successful extensions: 589655
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 1256
Number of HSP's that attempted gapping in prelim test: 585257
Number of HSP's gapped (non-prelim): 2388
length of query: 280
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 140
effective length of database: 9,074,351,707
effective search space: 1270409238980
effective search space used: 1270409238980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)