BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023563
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81263|KITH_ORYSJ Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2
Length = 271
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 177/205 (86%), Gaps = 2/205 (0%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKG-RNVAVIKSNKDTRYGLDSIVTH 128
EA S P GEIHVIVGPMFAGKTT LLRR+Q E G RNVA+IKS+KD RYGLDS+VTH
Sbjct: 60 EAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTH 118
Query: 129 DGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVA 188
DG K+PC AL LSSF+ K G++AYD+VDVIGIDEAQFF+DL+DFC +AAD DGK V+VA
Sbjct: 119 DGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVA 178
Query: 189 GLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYM 248
GLDGDY R FGSV+DIIPLADSVTKLTARCE CG+RAFFTLRKT ETKTELIGG+D+YM
Sbjct: 179 GLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYM 238
Query: 249 PVCRQHYVSGQVVVEAARIVLESQK 273
PVCRQHY+ GQ+V+EA RIVL+ +K
Sbjct: 239 PVCRQHYLDGQIVIEATRIVLDLEK 263
>sp|P23335|KITH_SWPVK Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1
Length = 177
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 6/180 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R + N VIK +KD RYG D++ THD + A
Sbjct: 4 GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYIS--A 61
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
++T S F K D D VD++GIDE QFF D+ +FC A+ GK VIVA LDG Y R+
Sbjct: 62 VSTDSLFDIK---DTLDDVDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 117
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYVS 257
FG+++++IPL++ VTKL A C C + A F+ R ++E + ELIGG + Y+ VCR Y++
Sbjct: 118 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCYLT 177
>sp|P04184|KITH_MOUSE Thymidine kinase, cytosolic OS=Mus musculus GN=Tk1 PE=2 SV=3
Length = 233
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 16/188 (8%)
Query: 74 SSPS---GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
SSPS G+I VI+GPMF+GK+T L+RR++ VIK KDTRY +S THD
Sbjct: 12 SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ DFC E ++GKTVIV
Sbjct: 71 NTMDALPACMLRDVT--QESLG------VAVIGIDEGQFFPDIVDFC-EMMANEGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRLCY 189
>sp|P04047|KITH_CHICK Thymidine kinase, cytosolic OS=Gallus gallus GN=TK1 PE=3 SV=1
Length = 224
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 114/188 (60%), Gaps = 12/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S P G+I VI GPMF+GK+T L+RR++ ++K KDTRY + THD
Sbjct: 12 GSPGRPRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDR 71
Query: 131 VKL---PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
+ P CAL + +++ GS VIGIDE QFF D+ +FC + A+ GKTVIV
Sbjct: 72 NTMEARPACALQDV--YQEALGSA------VIGIDEGQFFPDIVEFCEKMAN-TGKTVIV 122
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KL A C C + A +T R E + E+IGG+D Y
Sbjct: 123 AALDGTFQRKAFGSILNLVPLAESVVKLNAVCMECYREASYTKRLGAEREVEVIGGADKY 182
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 183 HSVCRACY 190
>sp|P04183|KITH_HUMAN Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1 PE=1 SV=2
Length = 234
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 16/195 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-SSFCTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G V VIGIDE QFF D+ +FC EA + GKTVIV
Sbjct: 71 NTMEALPACLLRDVA--QEALG------VAVIGIDEGQFFPDIVEFC-EAMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R+ FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQ 259
VCR Y SGQ
Sbjct: 182 HSVCRLCYFKKASGQ 196
>sp|P09768|KITH_CRIGR Thymidine kinase, cytosolic OS=Cricetulus griseus GN=TK1 PE=3 SV=1
Length = 234
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 114/188 (60%), Gaps = 13/188 (6%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY S THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQNKCLVIKYAKDTRYS-SSFSTHDR 70
Query: 131 V---KLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L ++ ++ G+ VIGIDE QFF D+ +FC E + GKTVIV
Sbjct: 71 NTMDALPACLLRDVA--QEALGAA------VIGIDEGQFFPDIVEFC-EVMANAGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FGS+++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 181
Query: 248 MPVCRQHY 255
VCR Y
Sbjct: 182 HSVCRVCY 189
>sp|A5D7R8|KITH_BOVIN Thymidine kinase, cytosolic OS=Bos taurus GN=TK1 PE=2 SV=1
Length = 238
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 115/198 (58%), Gaps = 16/198 (8%)
Query: 71 ASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDG 130
S S G+I VI+GPMF+GK+T L+RR++ VIK KDTRY THD
Sbjct: 12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYS-SLFSTHDR 70
Query: 131 ---VKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIV 187
LP C L + Q+ V VIGIDE QFF D+ +FC A+ GKTVIV
Sbjct: 71 NTMEALPACLLRDVIQDAQR--------VAVIGIDEGQFFPDIVEFCENMAN-SGKTVIV 121
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIY 247
A LDG + R++FG++++++PLA+SV KLTA C C + A +T R E + E+IGG+D Y
Sbjct: 122 AALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGVEKEVEVIGGADKY 181
Query: 248 MPVCRQHY---VSGQVVV 262
VCR Y SGQ V
Sbjct: 182 HSVCRLCYFKKASGQPAV 199
>sp|Q27564|KITH_DICDI Thymidine kinase 1 OS=Dictyostelium discoideum GN=thyB PE=1 SV=1
Length = 227
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYG--LDS--IVTH 128
V+ +G+I VI GPMF+GKTT L+RRI+ + +IK +KDTRY +D +VTH
Sbjct: 3 VTQIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTH 62
Query: 129 DGVK---LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTV 185
D PC L + Q + DVIGIDE QFF D+ F + A+ GKTV
Sbjct: 63 DKQNYQAFPCSILEDVKEQAQNY--------DVIGIDEGQFFPDVVQFSEDLANQ-GKTV 113
Query: 186 IVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSD 245
I+A LDG + R+ F SVID++ A+ +TKLTA C C A F+ R E ELIGG D
Sbjct: 114 IIAALDGTFQRKPFQSVIDLVSKAEYITKLTAVCMVCYNEAAFSKRIVESDDIELIGGID 173
Query: 246 IYMPVCRQHYVSGQ 259
Y+ VCR Y S Q
Sbjct: 174 KYISVCRGCYNSDQ 187
>sp|Q90033|KITH_YMTV5 Thymidine kinase OS=Yaba monkey tumor virus (strain VR587) GN=TK
PE=3 SV=1
Length = 181
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 114/183 (62%), Gaps = 7/183 (3%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
++S SG IH+I+GPMF+GK+T L+R ++ VIK +KD RYG +VTHD
Sbjct: 1 MNSRSGYIHIILGPMFSGKSTELIRLLKRYQVAMYTCLVIKYSKDERYG-RGLVTHDNDS 59
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+P + +L+ +D DVIGIDE QFF D+ +FC A+ +GK +IVA LDG
Sbjct: 60 VPAIPVNSLNEIN---CNDI--NADVIGIDEGQFFPDIVEFCDYMAN-NGKILIVAALDG 113
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+LR+ FG+++++IP A+ V KLTA C C A F+ R ++E + E+IGG + Y VCR
Sbjct: 114 TFLRQPFGNILNLIPRAEYVLKLTAVCMICFGSASFSKRISDEQEIEIIGGKEKYQSVCR 173
Query: 253 QHY 255
Y
Sbjct: 174 VCY 176
>sp|Q9Q8N6|KITH_MYXVL Thymidine kinase OS=Myxoma virus (strain Lausanne) GN=TK PE=3 SV=1
Length = 178
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 110/182 (60%), Gaps = 13/182 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KL 133
G+IH+I+GPMFAGK+T L+R ++ V+K KD RYG + + THD +
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVKYEKDARYG-NGVRTHDNTCISAV 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P +L + S + V+VIGIDE QFF ++ FC A+ GK +IVA LDG
Sbjct: 64 PTASLDDVESISE--------HVEVIGIDEGQFFPNIVSFCERMANA-GKVLIVAALDGT 114
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ R+ F ++ ++IPLA++VTKL A C +C K A F+ R ET+ E+IGGSD Y VCR+
Sbjct: 115 FQRKPFTNICELIPLAENVTKLNAVCMYCYKDASFSKRLGNETEIEIIGGSDKYKSVCRK 174
Query: 254 HY 255
Y
Sbjct: 175 CY 176
>sp|O57203|KITH_VACCA Thymidine kinase OS=Vaccinia virus (strain Ankara) GN=TK PE=1 SV=1
Length = 177
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 106/181 (58%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ YV
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYV 175
Query: 257 S 257
Sbjct: 176 G 176
>sp|P28851|KITH_MYXVU Thymidine kinase OS=Myxoma virus (strain Uriarra) GN=TK PE=3 SV=1
Length = 178
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 109/182 (59%), Gaps = 13/182 (7%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGV---KL 133
G+IH+I+GPMFAGK+T L+R ++ V+ KD RYG + + THD +
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVNYEKDARYG-NGVRTHDNTCISAV 63
Query: 134 PCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGD 193
P +L + S + V+VIGIDE QFF ++ FC A+ GK +IVA LDG
Sbjct: 64 PTASLDDVESISE--------HVEVIGIDEGQFFPNIVSFCERMANA-GKVLIVAALDGT 114
Query: 194 YLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQ 253
+ R+ F ++ ++IPLA++VTKL A C +C K A F+ R ET+ E+IGGSD Y VCR+
Sbjct: 115 FQRKPFTNICELIPLAENVTKLNAVCMYCYKDASFSKRLGNETEIEIIGGSDKYKSVCRK 174
Query: 254 HY 255
Y
Sbjct: 175 CY 176
>sp|P04364|KITH_VAR67 Thymidine kinase OS=Variola virus (isolate Human/India/Ind3/1967)
GN=TK PE=3 SV=2
Length = 177
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++D+IPL++ V KLTA C C K A F+ R ETK E+IGG D+Y VCR+ Y+
Sbjct: 116 KPFNNILDLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETKIEIIGGIDMYQSVCRKCYI 175
>sp|P68563|KITH_VACCW Thymidine kinase OS=Vaccinia virus (strain Western Reserve) GN=TK
PE=1 SV=1
Length = 177
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 175
>sp|P68564|KITH_VACCC Thymidine kinase OS=Vaccinia virus (strain Copenhagen) GN=TK PE=3
SV=1
Length = 177
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 175
>sp|Q9JFB7|KITH_VACCT Thymidine kinase OS=Vaccinia virus (strain Tian Tan) GN=TK PE=3
SV=1
Length = 177
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +++GPMF+GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLMIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFEAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + + VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EATKLCDVLE-----SITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F +++++IPL++ V KLTA C C K A F+ R EET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 KPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETEIEIIGGNDMYQSVCRKCYI 175
>sp|P04363|KITH_MONPV Thymidine kinase OS=Monkeypox virus GN=TK PE=3 SV=2
Length = 177
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPM +GK+T L+RR++ IK + D RYG + THD
Sbjct: 3 GGHIQLIIGPMLSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYG-TGLWTHDKNNFAAL 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T L + A VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 EVTKLCDVLE-----AITDFSVIGIDEGQFFPDIVEFCERMAN-EGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
R F +++++IPL++ V KLTA C C K A F+ R ET+ E+IGG+D+Y VCR+ Y+
Sbjct: 116 RPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGAETEIEIIGGNDMYQSVCRKCYI 175
>sp|Q90029|KITH_RACVI Thymidine kinase OS=Raccoon poxvirus GN=TK PE=3 SV=1
Length = 177
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 105/181 (58%), Gaps = 7/181 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G I +I+GPMF+GK+T L+RR++ IK DTRYG + THD
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCITIKYTNDTRYG-TGLWTHDKHNFSAM 61
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T L + DA VIGIDE QFF D+ +FC A+ +GK VIVA LDG + R
Sbjct: 62 ETTKLLNI-----IDAVTDFSVIGIDEGQFFPDIVEFCEYMAN-NGKIVIVAALDGTFQR 115
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
+ F ++ ++IPL++ V KLTA C C K A F+ R ET+ E+IGG D+Y VCR+ Y+
Sbjct: 116 KPFTTISNLIPLSEMVVKLTAVCMKCFKEASFSKRLGTETEIEIIGGEDMYQSVCRKCYI 175
Query: 257 S 257
+
Sbjct: 176 N 176
>sp|P07605|KITH_RFVKA Thymidine kinase OS=Rabbit fibroma virus (strain Kasza) GN=TK PE=3
SV=2
Length = 178
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G IH+I+GPMFAGK+T L+R ++ V+K KD RYG + + THD + +
Sbjct: 5 GGHIHLIIGPMFAGKSTELIRLVRRYQIAKHKCLVVKYEKDIRYG-NGVCTHDNMSITAV 63
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+L K S A + +VIGIDE QFF ++ FC A+ GK +IVA LDG + R
Sbjct: 64 CTPSL----DKIDSVA-ENAEVIGIDEGQFFPNIATFCERMANA-GKVLIVAALDGTFQR 117
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ F ++ ++IPLA++VTKL A C +C K F+ R ++ + E+IGGSD Y VCR+ Y
Sbjct: 118 KPFSNISELIPLAENVTKLNAVCMYCYKNGSFSKRLGDKMEIEVIGGSDKYKSVCRKCY 176
>sp|P16600|KITH_SHEVK Thymidine kinase OS=Sheeppox virus (strain KS-1) GN=TK PE=3 SV=1
Length = 177
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G IH+I+GPMF+GK+T L+R ++ V+K KD RYG +S+ THD + +
Sbjct: 4 GYIHLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLKDIRYG-NSVYTHDNNHVSAIS 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRR 197
T L K + D+IGIDE QFF+D+ F A+ GK +I+A LD + R+
Sbjct: 63 TTLLYDVVDKIMN-----FDIIGIDEGQFFKDIVSFSENMANM-GKIIIIAALDSTFQRK 116
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
F ++ +IPL++ VTKL A C C K A F+ R T+E + ELIGG + Y VCR+ Y
Sbjct: 117 EFNDILKLIPLSEKVTKLNAVCMECYKDAAFSKRITKEKEIELIGGKEKYKSVCRKCY 174
>sp|Q05880|KITH_CFEPV Thymidine kinase OS=Choristoneura fumiferana entomopoxvirus GN=TK
PE=3 SV=1
Length = 185
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI-VTHDGVKLPCCAL 138
I +I GPM++GKTT L+RRI +N +I + D R+ D+I + HDG K+
Sbjct: 3 IEIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRHDDDNILINHDGFKISHDDF 62
Query: 139 TTLSSFRQKFGSDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ K +D+ ++IGIDE QFF+ DL FC A++ GK +IVAGL+ D+ +
Sbjct: 63 IKTNILINKIK--IFDKYEIIGIDECQFFDSNDLIIFCDTLANN-GKKIIVAGLNSDFNK 119
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
F S+I +IP+++ +TKL + C FC A FT++K + IGGSD+Y+PVCR Y
Sbjct: 120 NPFKSIIKLIPISEKITKLQSICNFCYNDATFTMKKFNKDIIIEIGGSDLYIPVCRICYN 179
Query: 257 SGQVV 261
+
Sbjct: 180 ENNTI 184
>sp|P10052|KITH_FOWPN Thymidine kinase OS=Fowlpox virus (strain NVSL) GN=TK PE=3 SV=1
Length = 183
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 106/186 (56%), Gaps = 7/186 (3%)
Query: 76 PSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSI---VTHDGVK 132
SG IHVI GPMF+GKT+ L+RRI+ +IK D RY D I THD +
Sbjct: 2 SSGSIHVITGPMFSGKTSELVRRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLF 61
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDG 192
+ A + LS +D V VIGIDEAQFF D+ +F A+ GKTVIVA L+G
Sbjct: 62 MEATASSNLSVLVPTLLNDG---VQVIGIDEAQFFLDIVEFSESMANL-GKTVIVAALNG 117
Query: 193 DYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
D+ R FG+V ++ LA++V+ LTA C C A F+ R TE + IGG D Y+ VCR
Sbjct: 118 DFKRELFGNVYKLLSLAETVSSLTAICVKCYCDASFSKRVTENKEVMDIGGKDKYIAVCR 177
Query: 253 QHYVSG 258
+ + S
Sbjct: 178 KCFFSN 183
>sp|P28852|KITH_AMEPV Thymidine kinase OS=Amsacta moorei entomopoxvirus GN=TK PE=3 SV=1
Length = 182
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKL--PCCA 137
I +I+GPMF+GKTT L+R+I + +I N D R+ +I+ HDG L
Sbjct: 3 IELIIGPMFSGKTTELMRKINRYILSNQKCVIITHNIDNRFINKNIINHDGNILNKEYLY 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ T + + + D D+IGIDE QFFE DL FC + A+ + K VIVAGL+ D+
Sbjct: 63 IKTNNLINE---INIVDNYDIIGIDECQFFEENDLEQFCDKMAN-NKKKVIVAGLNCDFN 118
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R F S+ +IP + + KL A C+FC K A FT++K + + IGG D+Y+PVCR Y
Sbjct: 119 RNIFNSISKLIPKVEKIKKLQAICQFCYKDASFTIKKHNKNQIIEIGGQDLYVPVCRLCY 178
>sp|Q05879|KITH_CBEPV Thymidine kinase OS=Choristoneura biennis entomopoxvirus GN=TK PE=3
SV=1
Length = 186
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 7/186 (3%)
Query: 80 IHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDS--IVTHDGVKLPCCA 137
I +I GPM++GKTT L+RRI +N +I + D R D ++ HDG K+
Sbjct: 3 IEIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRCEEDDNILINHDGFKISHDD 62
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE--DLYDFCREAADHDGKTVIVAGLDGDYL 195
+ K +D+ ++IGIDE QFF+ DL FC A++ GK +IVAGL+ D+
Sbjct: 63 FIKTNILINKIK--IFDKYEIIGIDECQFFDSNDLMIFCDTLANN-GKKIIVAGLNSDFN 119
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ F S+I +IP+++ +TKL + C FC A FT++K + IGGSD+Y+PVCR Y
Sbjct: 120 KNPFKSIIKLIPISEKITKLQSICNFCYNDATFTMKKFNKDIIIEIGGSDLYIPVCRICY 179
Query: 256 VSGQVV 261
+
Sbjct: 180 NENNTI 185
>sp|A6L1E7|KITH_BACV8 Thymidine kinase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM
1447 / NCTC 11154) GN=tdk PE=3 SV=1
Length = 199
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F SD DV+GIDEAQFF E L D C + AD +G VIVAGLD D+ R
Sbjct: 76 IDSSASILL-FSSDK----DVVGIDEAQFFDEGLVDVCNKLAD-NGIRVIVAGLDMDFRR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + ++ +AD VTK+ A C CG A+ T R T+ K L+G Y P+CR Y+
Sbjct: 130 VPFGPIPALLAIADEVTKVHAICVKCGNLAYATHRITKSEKRVLLGEKADYEPLCRTCYM 189
Query: 257 SG 258
Sbjct: 190 EA 191
>sp|Q8A5G4|KITH_BACTN Thymidine kinase OS=Bacteroides thetaiotaomicron (strain ATCC 29148
/ DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=tdk PE=3
SV=1
Length = 199
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY + +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+D L D CR+ A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDDGLIDVCRQLAN-NGIRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHYV 256
FG + + +AD V+K+ A C CG A F+ R + K L+G + Y P+CR+ Y+
Sbjct: 130 NPFGPMPQLCAIADEVSKVHAICVKCGDLASFSHRTVKNDKQVLLGETAEYEPLCRECYL 189
Query: 257 SGQ 259
+
Sbjct: 190 RAR 192
>sp|Q6F0I2|KITH_MESFL Thymidine kinase OS=Mesoplasma florum (strain ATCC 33453 / NBRC
100688 / NCTC 11704 / L1) GN=tdk PE=3 SV=1
Length = 203
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 9/186 (4%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G + +I G MFAGKT ++R++ RNV K DTRY ++ + +H G LP
Sbjct: 14 GWVELITGCMFAGKTEEFIKRLRRHAFAKRNVIAFKPVIDTRYAVNEVASHAGTLLPSIP 73
Query: 138 LTTLSSFRQKFGSDAYDQ-VDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYL 195
+ + + ++K + ++ VDV+GIDE QFF++ + D+ E AD G VIV GLD D+
Sbjct: 74 VNSTAELKEKLEAKILEKKVDVVGIDEIQFFDEAIVDYIEELADR-GIIVIVTGLDKDFR 132
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
+ F +V I+PLA+ V KLTA C+ CG A T R + + L+ G+D Y
Sbjct: 133 SQPFKNVDRILPLAEMVDKLTAICQKCGNFANRTQRIIDGKPADWNSPLILVDGNDSYEA 192
Query: 250 VCRQHY 255
CR Y
Sbjct: 193 RCRNCY 198
>sp|Q4A977|KITH_MYCHJ Thymidine kinase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934
/ NCTC 10110) GN=tdk PE=3 SV=1
Length = 184
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L++RI+ T VIK + D R+ IV+ G+K+P
Sbjct: 8 GVIEVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFL 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T R F D Y I IDE QFF E++ F + AD G VIV+GLD D+ R
Sbjct: 68 ARTTQEIRDLFTRDNYQ---AIAIDEIQFFDEEIVTFLEQIADK-GIRVIVSGLDQDFRR 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+ FGS+ +++ +A++VTKL A C C + A T RK LIG D Y CR
Sbjct: 124 KPFGSLPNLMAIAENVTKLQAVCSLCKRAATTTARKVLNEAQTLIGDQDEYEARCR 179
>sp|Q4A7B8|KITH_MYCH7 Thymidine kinase OS=Mycoplasma hyopneumoniae (strain 7448) GN=tdk
PE=3 SV=1
Length = 184
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L++RI+ T VIK + D R+ IV+ G+K+P
Sbjct: 8 GVIEVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFL 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T R F D Y I IDE QFF E++ F + AD G VIV+GLD D+ R
Sbjct: 68 ARTTQEIRDLFTRDNYQ---AIAIDEIQFFDEEIVTFLEQIADK-GIRVIVSGLDQDFRR 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+ FGS+ +++ +A++VTKL A C C + A T RK LIG D Y CR
Sbjct: 124 KPFGSLPNLMAIAENVTKLQAVCSLCKRAATTTARKVLNEAQTLIGDQDEYEARCR 179
>sp|Q5ZZT0|KITH_MYCH2 Thymidine kinase OS=Mycoplasma hyopneumoniae (strain 232) GN=tdk
PE=3 SV=1
Length = 184
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI GPMF+GK+ L++RI+ T VIK + D R+ IV+ G+K+P
Sbjct: 8 GVIEVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFL 67
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
T R F D Y I IDE QFF E++ F + AD G VIV+GLD D+ R
Sbjct: 68 ARTTQEIRDLFTRDNYQ---AIAIDEIQFFDEEIVTFLEQIADK-GIRVIVSGLDQDFRR 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCR 252
+ FGS+ +++ +A++VTKL A C C + A T RK LIG D Y CR
Sbjct: 124 KPFGSLPNLMAIAENVTKLQAVCSLCKRAATTTARKVLNEAQTLIGDQDEYEARCR 179
>sp|Q9ZIG2|KITH_RHOSI Thymidine kinase OS=Rhodothermus sp. (strain ITI 518) GN=tdk PE=3
SV=1
Length = 213
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V V K D RY +V+HD L
Sbjct: 15 GWIEVICGSMFSGKTEELIRRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRS-- 72
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
T + S Q D DV+GIDEAQFF+ L D C++ A+ DGK VIVAGLD +Y+
Sbjct: 73 -TPVDSAEQILL--LADSADVVGIDEAQFFDMTLVDVCQQLAN-DGKRVIVAGLDQEYMG 128
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
R + + +A+ VTKL A C CG A + R T+E ++G +D Y P CR+ +
Sbjct: 129 RPLEPMPQFMAVAEYVTKLHAICAVCGAPANHSQRLTDEEGRVVLGAADRYEPRCRRCF 187
>sp|B7GMH4|KITH_ANOFW Thymidine kinase OS=Anoxybacillus flavithermus (strain DSM 21510 /
WK1) GN=tdk PE=3 SV=1
Length = 206
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ + V V K D RY +++V+H+G +
Sbjct: 7 SGWLEVICGSMFSGKSEELIRRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTSVIAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
++ S R+ + DV+ IDE QFF E + D ++ AD +G VIVAGLD D+
Sbjct: 67 PVSCASDIRKHITT----HTDVVAIDEVQFFDEHVVDVVQQLAD-EGYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+SVTKL A C CG A T R LIG S+ Y P
Sbjct: 122 GEPFGPVPTLMSIAESVTKLQAVCTVCGSPASRTQRLINGRPASYYDPVILIGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>sp|Q65DU6|KITH_BACLD Thymidine kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC
14580) GN=tdk PE=3 SV=1
Length = 194
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RRI+ T + V V K D RY +S+V+H+G + C
Sbjct: 7 SGWLELICGSMFSGKSEELIRRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIVCH 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
A+ + Q + DVIG+DE QFF++ + G VI AGLD D+
Sbjct: 67 AIASPEEIFQYISK----ETDVIGVDEVQFFDETIVGTLTSLADQGYRVIAAGLDLDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPV 250
FG V D++ LA++VTKL A C CG A T R + + L+G S+ Y
Sbjct: 123 EPFGVVPDLMALAETVTKLQAVCSVCGSPASRTQRLINGKPASYDDPVILVGASEAYEAR 182
Query: 251 CRQHY 255
CR H+
Sbjct: 183 CRHHH 187
>sp|B2RJJ6|KITH_PORG3 Thymidine kinase OS=Porphyromonas gingivalis (strain ATCC 33277 /
DSM 20709 / JCM 12257) GN=tdk PE=3 SV=1
Length = 204
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT LLRR++ + V + K D RY +V+HD +
Sbjct: 16 GSIEVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASAP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ QVDV+GIDEAQFF E L + ++ AD G V++AGLD D+ R
Sbjct: 76 VDNSANILL-----LSSQVDVVGIDEAQFFDEGLVEVAQQLADQ-GVRVVIAGLDMDFRR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + + +ADSVTK+ A C CG+ A ++ R+ + + ++G + Y P+CR Y
Sbjct: 130 QPFGPMPGLCAIADSVTKVHAVCVECGRLASYSFRRVQGDQQVMLGELNEYSPLCRTCY 188
>sp|Q7MVV7|KITH_PORGI Thymidine kinase OS=Porphyromonas gingivalis (strain ATCC BAA-308 /
W83) GN=tdk PE=3 SV=1
Length = 204
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT LLRR++ + V + K D RY +V+HD +
Sbjct: 16 GSIEVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ ++ QVDV+GIDEAQFF E L + ++ AD G V++AGLD D+ R
Sbjct: 76 VDNSANILL-----LSSQVDVVGIDEAQFFDEGLVEVAQQLADQ-GVRVVIAGLDMDFRR 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
+ FG + + +ADSVTK+ A C CG+ A ++ R+ + + ++G + Y P+CR Y
Sbjct: 130 QPFGPMPGLCAIADSVTKVHAVCVECGRLASYSFRRVQGDQQVMLGELNEYSPLCRTCY 188
>sp|C5D9N8|KITH_GEOSW Thymidine kinase OS=Geobacillus sp. (strain WCH70) GN=tdk PE=3 SV=1
Length = 205
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + VI G MF+GK+ L+RR++ T + V V K D RY +++V+H+G L
Sbjct: 7 SGWLEVICGSMFSGKSEELIRRVRRATFAKQEVKVFKPTIDNRYSDEAVVSHNGNSLIAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLDGDYL 195
+++ + ++ DVI IDE QFF +D+ D + AD G VIVAGLD D+
Sbjct: 67 PVSSPKEIFEHIS----EKTDVIAIDEVQFFSDDIIDVVQTLADR-GYRVIVAGLDQDFR 121
Query: 196 RRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMP 249
FG V ++ +A+SVTKL A C CG A T R L+G S+ Y P
Sbjct: 122 GEPFGPVPTLMAIAESVTKLQAVCTVCGSPASRTQRLINGVPASYYDPVILVGASESYEP 181
Query: 250 VCRQHY 255
CR H+
Sbjct: 182 RCRHHH 187
>sp|A4ITL0|KITH_GEOTN Thymidine kinase OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=tdk PE=3 SV=1
Length = 207
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + VI G MF+GK+ L+RRI+ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLEVICGSMFSGKSEELIRRIRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAELFRYISA----TTDVVAIDEVQFFSDDIIDVVQTLADR-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ LA+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMALAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPIILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>sp|Q64YL9|KITH_BACFR Thymidine kinase OS=Bacteroides fragilis (strain YCH46) GN=tdk PE=3
SV=1
Length = 199
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGVRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y
Sbjct: 130 VPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCRECY 188
>sp|Q5LHP5|KITH_BACFN Thymidine kinase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC
9343) GN=tdk PE=3 SV=1
Length = 199
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VI G MF+GKT L+RR++ + V + K DTRY +V+HD +
Sbjct: 16 GRIEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSISSTP 75
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFED-LYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + +S F S ++DV+GIDEAQFF+ L D C + A+ +G VI+AGLD D+
Sbjct: 76 IDSSASILL-FTS----EIDVVGIDEAQFFDSGLIDVCNQLAN-NGVRVIIAGLDMDFKG 129
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGGSDIYMPVCRQHY 255
FG + + +AD V+K+ A C CG+ A F+ R + K L+G + Y P+CR+ Y
Sbjct: 130 IPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCRECY 188
>sp|Q8RDA1|KITH_THETN Thymidine kinase OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=tdk PE=3 SV=1
Length = 193
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIRRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGSSINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+T S D V+ IDE QFF+ L D RE AD GK VI AGLD D+
Sbjct: 69 VTKASEILDLLEEDT----QVVAIDEIQFFDHSLVDVVREIADM-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG DI+ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGVTPDIMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>sp|Q2SSX9|KITH_MYCCT Thymidine kinase OS=Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC 27343 / NCTC 10154) GN=tdk PE=3
SV=1
Length = 209
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 70 EASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHD 129
EA S+ G I +I G MFAGKT +RR++ + + V K + D RY +++I++H
Sbjct: 10 EAYNSNKMGWIELITGCMFAGKTEEFIRRLKVLSYAKKRVLAFKPSIDNRYSVENIISHS 69
Query: 130 GVKLPCCALTTLSSFRQKF-GSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIV 187
G KL + + +Q + QVDVIGIDE QFF E++ D + AD+ G VIV
Sbjct: 70 GSKLDSYLVKSSDEIKQIVEKENQIQQVDVIGIDEVQFFDENVVDIIEQLADN-GIIVIV 128
Query: 188 AGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTE------ETKTELI 241
GLD D+ F +V ++ A+ VTKL ARC CG A + R ++ L+
Sbjct: 129 NGLDKDFRGLPFKNVDKLLVKAEFVTKLRARCHLCGSFANRSQRIVNGQPALWDSPLILV 188
Query: 242 GGSDIYMPVCRQHYVS 257
G + Y CR+ ++S
Sbjct: 189 DGKESYEARCRKCFIS 204
>sp|Q8CRM9|KITH_STAES Thymidine kinase OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=tdk PE=3 SV=1
Length = 199
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>sp|Q5HMA3|KITH_STAEQ Thymidine kinase OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=tdk PE=3 SV=1
Length = 199
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG I I G MF+GK+ L+RR++ + V V K D RY + +V+H+G ++
Sbjct: 7 SGWIETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAI 66
Query: 137 ALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 196
++T Q+ + ++V+VIGIDE QFFED E +G VIVAGLD D+
Sbjct: 67 NISTA----QEILNHKLEEVNVIGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRG 122
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR--KTEETKTE----LIGGSDIYMPV 250
F + ++ +++ +TKL A C CG + T R E K + L+G ++ Y P
Sbjct: 123 EPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRLINGEPAKVDDPIILVGANESYEPR 182
Query: 251 CRQHYV 256
CR H++
Sbjct: 183 CRAHHI 188
>sp|Q8EM59|KITH_OCEIH Thymidine kinase OS=Oceanobacillus iheyensis (strain DSM 14371 /
JCM 11309 / KCTC 3954 / HTE831) GN=tdk PE=3 SV=1
Length = 207
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V +G + +I G MF+GK+ L+RR++ T NV V K D RY +IV+HDG
Sbjct: 3 VMKQNGWVELICGSMFSGKSEELIRRVRRATYAHINVRVYKPAIDDRYDDKAIVSHDGTS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLD 191
+ + D + V+++GIDE QFF+ ++ D E AD G VIVAGLD
Sbjct: 63 TMARPIHDAVEILE----DVDNNVEIVGIDEVQFFDNNVVDVIEELADR-GIRVIVAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSD 245
D+ F V I+ LA+SVTKL A C CG A T R + L+G S+
Sbjct: 118 LDFRGEPFEPVPKIMALAESVTKLNAICPICGSPASRTQRLIDGKPASYNDPIILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 SYEPRCRHHH 187
>sp|B0K1F4|KITH_THEPX Thymidine kinase OS=Thermoanaerobacter sp. (strain X514) GN=tdk
PE=3 SV=1
Length = 193
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + D +VI IDE QFF+ + D RE AD GK VI AGLD D+
Sbjct: 69 VVKAFEIIELLEEDT----EVIAIDEIQFFDHSIVDVVREIADL-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG D++ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGPTPDVMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>sp|B0K7G9|KITH_THEP3 Thymidine kinase OS=Thermoanaerobacter pseudethanolicus (strain
ATCC 33223 / 39E) GN=tdk PE=3 SV=1
Length = 193
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 78 GEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCA 137
G I VIVGPMF+GK+ L+RRI+ + V V K D RY +D +V+H+G + +
Sbjct: 9 GFIEVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAIS 68
Query: 138 LTTLSSFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLR 196
+ + D +VI IDE QFF+ + D RE AD GK VI AGLD D+
Sbjct: 69 VVKAFEIIELLEEDT----EVIAIDEIQFFDHSIVDVVREIADL-GKRVICAGLDMDFRG 123
Query: 197 RSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTE------LIGGSDIYMPV 250
FG D++ +A+SV KLTA C CG A T R + L+G + Y
Sbjct: 124 EPFGPTPDVMAIAESVDKLTAICVKCGNPATRTQRLINGKPAKYDDPIILVGAHETYEAR 183
Query: 251 CRQ 253
CR+
Sbjct: 184 CRK 186
>sp|Q8ZV53|KITH_PYRAE Thymidine kinase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2
/ DSM 7523 / JCM 9630 / NBRC 100827) GN=tdk PE=3 SV=1
Length = 185
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 82 VIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCCALTTL 141
VIVGPMFAGKTT L+RR++ GR V K + D RY + H+G+K +
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGRRAIVFKPSLDVRYDASKVAAHNGLKFDAFVIPPD 63
Query: 142 S---SFRQKFGSDAYDQVDVIGIDEAQFFE-DLYDFCREAADHDGKTVIVAGLDGDYLRR 197
+K G+ + DV+ +DE QFF DL D + A +G+ VI AGL+ D+
Sbjct: 64 KDGVEIIRKMGA----EYDVVAVDEIQFFPVDLADALNQLA--NGRIVIAAGLNLDFRGE 117
Query: 198 SFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSDIYMPVC 251
F + + AD V L+A C+ CGK A T R + LIGG++ Y C
Sbjct: 118 PFETTARAMAFADRVISLSAVCKLCGKPATRTQRLINGVPAPRHSPRILIGGNESYEARC 177
Query: 252 RQHYV 256
R+HYV
Sbjct: 178 RRHYV 182
>sp|Q9RSY5|KITH_DEIRA Thymidine kinase OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=tdk PE=3 SV=1
Length = 212
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
G + V+VGPMF+GK+ L+RR+ + VAV K D RY + +H G L
Sbjct: 8 GGHLEVVVGPMFSGKSEELIRRLTRSLIARQRVAVFKPAIDNRYHASEVASHAGRTLEAV 67
Query: 137 ALTTLSSFRQKFG------SDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAG 189
A+ + R + S A + VDVIGIDEAQFF +L E AD G V++AG
Sbjct: 68 AVPDAQAIRAQLSGQGELLSAAPEGVDVIGIDEAQFFGPELVPLVLELADA-GVRVVLAG 126
Query: 190 LDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEETKTELIGG 243
LD D+ FGS+ +++ A+SV KLTA C CG A T R LIGG
Sbjct: 127 LDLDFRAEPFGSMPELLARAESVDKLTAICTVCGAPATRTQR--------LIGG 172
>sp|Q5KUH1|KITH_GEOKA Thymidine kinase OS=Geobacillus kaustophilus (strain HTA426) GN=tdk
PE=3 SV=1
Length = 207
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 73 VSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVK 132
V + SG + +I G MF+GK+ L+RR++ + V V K D RY D++V+H+G
Sbjct: 3 VMTQSGWLELICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNS 62
Query: 133 LPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
+ + T + + + DV+ IDE QFF +D+ D + AD G VI AGLD
Sbjct: 63 VIAIPVATPAEMFRYISA----ATDVVAIDEIQFFSDDIIDVVQTLADC-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V ++ +A+SVTKL A C CG A T R + + L+G S+
Sbjct: 118 QDFRGEPFGPVPALMAIAESVTKLQAVCTVCGSPASRTQRLINGAPASYDDPVILVGASE 177
Query: 246 IYMPVCRQHY 255
Y P CR H+
Sbjct: 178 AYEPRCRHHH 187
>sp|Q03221|KITH_BACSU Thymidine kinase OS=Bacillus subtilis (strain 168) GN=tdk PE=3 SV=2
Length = 195
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 77 SGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNKDTRYGLDSIVTHDGVKLPCC 136
SG + +I G MF+GK+ L+RR++ T + V V K D RY ++V+H+G
Sbjct: 7 SGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNG------ 60
Query: 137 ALTTLSSFRQKFGSDAYDQV----DVIGIDEAQFF-EDLYDFCREAADHDGKTVIVAGLD 191
T+++S+ +D +D + DV+ +DE QFF +++ + AD G VI AGLD
Sbjct: 61 --TSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADK-GYRVIAAGLD 117
Query: 192 GDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLR------KTEETKTELIGGSD 245
D+ FG V +I+ +A+SVTKL A C CG A T R + + L+G ++
Sbjct: 118 MDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAE 177
Query: 246 IYMPVCRQHY 255
Y CR H+
Sbjct: 178 SYEARCRHHH 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,500,571
Number of Sequences: 539616
Number of extensions: 4007448
Number of successful extensions: 14261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 13754
Number of HSP's gapped (non-prelim): 339
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)