Query 023565
Match_columns 280
No_of_seqs 184 out of 1288
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:00:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 100.0 1.9E-62 6.4E-67 448.1 29.5 262 6-267 24-285 (344)
2 4aec_A Cysteine synthase, mito 100.0 2.7E-61 9.1E-66 449.5 30.2 272 4-275 110-388 (430)
3 3tbh_A O-acetyl serine sulfhyd 100.0 6.4E-61 2.2E-65 436.5 31.3 272 3-275 7-285 (334)
4 1z7w_A Cysteine synthase; tran 100.0 3.1E-60 1.1E-64 430.2 30.6 270 6-275 4-280 (322)
5 3dwg_A Cysteine synthase B; su 100.0 4.6E-59 1.6E-63 422.9 28.8 263 5-276 3-279 (325)
6 2q3b_A Cysteine synthase A; py 100.0 1.3E-58 4.5E-63 417.9 31.0 269 6-275 5-280 (313)
7 1y7l_A O-acetylserine sulfhydr 100.0 1.2E-58 4.2E-63 418.7 27.4 267 7-276 3-284 (316)
8 1ve1_A O-acetylserine sulfhydr 100.0 3.1E-58 1E-62 414.0 29.8 265 10-275 2-274 (304)
9 2v03_A Cysteine synthase B; py 100.0 6.9E-58 2.3E-62 411.5 31.0 258 9-275 2-266 (303)
10 2pqm_A Cysteine synthase; OASS 100.0 2.7E-58 9.3E-63 420.7 28.3 268 6-275 12-291 (343)
11 2egu_A Cysteine synthase; O-ac 100.0 1.4E-58 5E-63 416.8 24.6 267 7-275 4-277 (308)
12 1o58_A O-acetylserine sulfhydr 100.0 6E-57 2E-61 405.4 26.2 259 9-275 12-278 (303)
13 1jbq_A B, cystathionine beta-s 100.0 1.1E-55 3.9E-60 413.3 30.3 270 6-276 97-383 (435)
14 3pc3_A CG1753, isoform A; CBS, 100.0 1.2E-55 4E-60 424.4 28.2 271 5-276 48-335 (527)
15 3l6b_A Serine racemase; pyrido 100.0 2.8E-56 9.6E-61 407.8 20.2 265 4-274 12-295 (346)
16 2gn0_A Threonine dehydratase c 100.0 3.2E-56 1.1E-60 407.0 17.3 263 4-275 27-308 (342)
17 1ve5_A Threonine deaminase; ri 100.0 3.2E-55 1.1E-59 395.4 18.2 263 3-276 6-291 (311)
18 1v71_A Serine racemase, hypoth 100.0 2E-55 6.7E-60 398.9 16.0 263 4-276 13-295 (323)
19 1p5j_A L-serine dehydratase; l 100.0 4.1E-54 1.4E-58 396.8 24.3 261 6-274 35-315 (372)
20 4h27_A L-serine dehydratase/L- 100.0 6E-54 2.1E-58 394.8 24.4 253 7-267 36-301 (364)
21 1tdj_A Biosynthetic threonine 100.0 8.7E-54 3E-58 406.2 21.5 258 10-276 24-300 (514)
22 2rkb_A Serine dehydratase-like 100.0 7.1E-53 2.4E-57 381.2 23.8 246 13-267 3-261 (318)
23 3aey_A Threonine synthase; PLP 100.0 9.3E-53 3.2E-57 385.4 24.4 259 8-276 19-301 (351)
24 2d1f_A Threonine synthase; ami 100.0 6.2E-53 2.1E-57 387.7 22.9 258 9-275 30-309 (360)
25 3iau_A Threonine deaminase; py 100.0 2.4E-53 8.2E-58 391.2 18.3 259 9-276 52-329 (366)
26 2zsj_A Threonine synthase; PLP 100.0 1.8E-52 6E-57 383.7 23.7 258 8-275 21-302 (352)
27 3ss7_X D-serine dehydratase; t 100.0 4.3E-52 1.5E-56 391.1 25.2 261 13-276 74-398 (442)
28 4d9b_A D-cysteine desulfhydras 100.0 1.2E-52 4.2E-57 383.2 17.6 267 3-276 18-313 (342)
29 1f2d_A 1-aminocyclopropane-1-c 100.0 3.4E-53 1.2E-57 386.8 13.2 265 5-275 3-306 (341)
30 1j0a_A 1-aminocyclopropane-1-c 100.0 1.8E-52 6E-57 379.8 16.5 264 5-275 9-293 (325)
31 4d9i_A Diaminopropionate ammon 100.0 4E-51 1.4E-55 380.3 22.3 265 7-275 32-350 (398)
32 1wkv_A Cysteine synthase; homo 100.0 4.8E-49 1.6E-53 364.1 24.8 247 15-276 94-353 (389)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 1.1E-50 3.7E-55 369.7 12.8 265 5-276 3-306 (338)
34 1x1q_A Tryptophan synthase bet 100.0 4.4E-48 1.5E-52 361.7 20.0 259 13-275 72-385 (418)
35 1v8z_A Tryptophan synthase bet 100.0 1.9E-47 6.4E-52 354.5 20.4 253 9-267 41-341 (388)
36 1qop_B Tryptophan synthase bet 100.0 2.7E-47 9.4E-52 354.3 20.2 251 11-267 48-345 (396)
37 2o2e_A Tryptophan synthase bet 100.0 6.2E-46 2.1E-50 347.3 22.5 251 12-267 75-372 (422)
38 1e5x_A Threonine synthase; thr 100.0 6.5E-46 2.2E-50 352.5 20.9 255 12-276 125-416 (486)
39 1vb3_A Threonine synthase; PLP 100.0 1.5E-39 5.2E-44 304.7 18.5 243 15-276 81-365 (428)
40 1kl7_A Threonine synthase; thr 100.0 7.2E-36 2.5E-40 284.1 22.4 252 14-276 93-434 (514)
41 4f4f_A Threonine synthase; str 100.0 5.3E-36 1.8E-40 281.8 19.3 241 18-276 94-403 (468)
42 3v7n_A Threonine synthase; ssg 100.0 3.9E-34 1.3E-38 269.4 19.5 246 18-275 103-421 (487)
43 3fwz_A Inner membrane protein 95.3 0.43 1.5E-05 36.4 12.4 97 71-209 9-106 (140)
44 1vp8_A Hypothetical protein AF 91.5 1.7 6E-05 35.3 10.0 76 42-123 22-106 (201)
45 3s2e_A Zinc-containing alcohol 91.0 2.3 7.7E-05 37.3 11.5 61 58-122 157-217 (340)
46 3jyn_A Quinone oxidoreductase; 90.3 1.9 6.4E-05 37.6 10.2 58 61-121 134-191 (325)
47 3c85_A Putative glutathione-re 90.1 5 0.00017 31.5 11.8 94 72-207 42-138 (183)
48 4a2c_A Galactitol-1-phosphate 90.0 3 0.0001 36.4 11.3 65 59-126 152-216 (346)
49 3qwb_A Probable quinone oxidor 89.8 2.8 9.5E-05 36.6 10.9 59 61-122 142-200 (334)
50 1kol_A Formaldehyde dehydrogen 89.4 3.7 0.00013 36.8 11.6 58 59-119 177-234 (398)
51 4b7c_A Probable oxidoreductase 88.8 4.1 0.00014 35.5 11.3 58 61-121 143-201 (336)
52 3gqv_A Enoyl reductase; medium 88.6 1.6 5.5E-05 38.9 8.6 52 66-121 163-214 (371)
53 4dup_A Quinone oxidoreductase; 88.6 3.3 0.00011 36.5 10.6 58 61-121 161-218 (353)
54 3uog_A Alcohol dehydrogenase; 87.9 4.2 0.00014 36.0 10.8 57 61-121 183-239 (363)
55 3fpc_A NADP-dependent alcohol 87.8 3 0.0001 36.7 9.7 59 59-120 158-216 (352)
56 3gaz_A Alcohol dehydrogenase s 87.6 4.4 0.00015 35.5 10.7 54 61-118 144-197 (343)
57 3l9w_A Glutathione-regulated p 87.6 6.1 0.00021 36.0 11.8 50 71-123 6-55 (413)
58 4eye_A Probable oxidoreductase 86.9 3 0.0001 36.6 9.2 58 61-121 153-210 (342)
59 3tqh_A Quinone oxidoreductase; 86.9 3.6 0.00012 35.7 9.6 61 58-122 143-203 (321)
60 4fn4_A Short chain dehydrogena 86.6 9.2 0.00031 32.3 11.7 54 69-122 8-62 (254)
61 4ej6_A Putative zinc-binding d 86.5 4 0.00014 36.3 9.9 60 59-121 174-233 (370)
62 2c0c_A Zinc binding alcohol de 86.2 5.3 0.00018 35.3 10.5 59 61-122 157-215 (362)
63 3gms_A Putative NADPH:quinone 86.1 3.4 0.00012 36.1 9.1 60 60-122 137-196 (340)
64 3iup_A Putative NADPH:quinone 85.7 4.8 0.00016 35.9 10.0 53 67-122 170-223 (379)
65 4g81_D Putative hexonate dehyd 85.2 12 0.00043 31.5 11.9 53 69-122 10-64 (255)
66 1h2b_A Alcohol dehydrogenase; 85.2 8.8 0.0003 33.8 11.4 56 63-122 182-238 (359)
67 4fs3_A Enoyl-[acyl-carrier-pro 84.8 5.1 0.00018 33.6 9.3 31 69-99 7-39 (256)
68 3pi7_A NADH oxidoreductase; gr 84.6 3.6 0.00012 36.1 8.6 51 69-122 166-216 (349)
69 1v3u_A Leukotriene B4 12- hydr 84.0 11 0.00038 32.6 11.4 56 61-119 139-194 (333)
70 3krt_A Crotonyl COA reductase; 83.7 4.3 0.00015 37.2 8.9 57 63-122 224-280 (456)
71 2eih_A Alcohol dehydrogenase; 83.6 7.8 0.00027 33.8 10.3 58 59-119 157-215 (343)
72 3ip1_A Alcohol dehydrogenase, 83.5 5 0.00017 36.1 9.1 55 64-121 210-264 (404)
73 1f8f_A Benzyl alcohol dehydrog 83.5 8.8 0.0003 33.9 10.7 59 61-122 184-242 (371)
74 1yb5_A Quinone oxidoreductase; 83.4 13 0.00045 32.6 11.7 56 62-120 165-220 (351)
75 2j8z_A Quinone oxidoreductase; 83.4 8.7 0.0003 33.7 10.5 58 61-121 156-213 (354)
76 1pqw_A Polyketide synthase; ro 82.9 13 0.00044 29.4 10.5 53 62-117 33-85 (198)
77 1zsy_A Mitochondrial 2-enoyl t 82.8 6.6 0.00023 34.5 9.5 60 61-120 161-221 (357)
78 2dph_A Formaldehyde dismutase; 82.7 12 0.00042 33.4 11.4 57 59-119 177-234 (398)
79 1jvb_A NAD(H)-dependent alcoho 82.5 11 0.00037 32.9 10.8 59 60-121 163-222 (347)
80 2hcy_A Alcohol dehydrogenase 1 82.2 13 0.00043 32.5 11.1 60 58-120 160-219 (347)
81 1t57_A Conserved protein MTH16 81.8 5.7 0.00019 32.4 7.7 75 42-123 30-113 (206)
82 1e3j_A NADP(H)-dependent ketos 81.6 8.3 0.00028 33.8 9.7 57 60-120 161-217 (352)
83 1vj0_A Alcohol dehydrogenase, 81.6 8 0.00027 34.4 9.7 59 59-121 186-246 (380)
84 3goh_A Alcohol dehydrogenase, 81.4 2.7 9.2E-05 36.3 6.3 58 58-120 133-190 (315)
85 3two_A Mannitol dehydrogenase; 81.3 5.3 0.00018 35.0 8.3 58 59-120 168-225 (348)
86 1wly_A CAAR, 2-haloacrylate re 81.3 10 0.00034 32.9 10.0 56 62-120 140-195 (333)
87 4a0s_A Octenoyl-COA reductase/ 81.2 3 0.0001 38.1 6.8 120 63-208 216-336 (447)
88 3fbg_A Putative arginate lyase 81.1 13 0.00045 32.4 10.8 51 67-120 150-200 (346)
89 1qor_A Quinone oxidoreductase; 80.9 12 0.0004 32.3 10.3 55 62-119 135-189 (327)
90 1gu7_A Enoyl-[acyl-carrier-pro 80.9 6.8 0.00023 34.5 8.9 58 63-120 162-221 (364)
91 2zb4_A Prostaglandin reductase 80.5 15 0.00053 32.0 11.1 57 61-120 152-212 (357)
92 3uko_A Alcohol dehydrogenase c 79.9 9.8 0.00034 33.7 9.7 57 61-120 187-243 (378)
93 1rjw_A ADH-HT, alcohol dehydro 79.5 13 0.00043 32.4 10.1 52 64-119 161-212 (339)
94 2d8a_A PH0655, probable L-thre 79.4 13 0.00044 32.4 10.2 57 59-120 160-217 (348)
95 2vn8_A Reticulon-4-interacting 79.2 6.4 0.00022 34.9 8.1 54 65-122 181-234 (375)
96 2j3h_A NADP-dependent oxidored 77.9 18 0.00062 31.3 10.6 56 61-119 149-205 (345)
97 4ibo_A Gluconate dehydrogenase 77.9 30 0.001 29.0 11.8 29 69-97 27-55 (271)
98 3jv7_A ADH-A; dehydrogenase, n 77.8 13 0.00044 32.4 9.6 54 64-121 168-222 (345)
99 4eez_A Alcohol dehydrogenase 1 77.5 16 0.00055 31.6 10.2 60 60-123 156-216 (348)
100 1pl8_A Human sorbitol dehydrog 76.9 11 0.00037 33.1 8.9 57 60-120 164-221 (356)
101 1xa0_A Putative NADPH dependen 76.9 4.9 0.00017 34.9 6.5 57 61-120 142-199 (328)
102 1c1d_A L-phenylalanine dehydro 76.9 10 0.00034 33.9 8.6 65 50-118 155-221 (355)
103 1p0f_A NADP-dependent alcohol 76.9 12 0.00041 33.0 9.2 56 61-119 185-240 (373)
104 3llv_A Exopolyphosphatase-rela 76.3 12 0.00041 27.7 7.9 48 72-122 9-56 (141)
105 3l4b_C TRKA K+ channel protien 75.2 30 0.001 27.7 12.5 49 72-123 3-52 (218)
106 4fgs_A Probable dehydrogenase 75.2 25 0.00086 29.9 10.4 30 69-98 30-59 (273)
107 3i1j_A Oxidoreductase, short c 75.0 32 0.0011 27.9 10.9 30 69-98 15-44 (247)
108 1iz0_A Quinone oxidoreductase; 74.7 7.9 0.00027 33.1 7.2 55 62-120 121-175 (302)
109 1tt7_A YHFP; alcohol dehydroge 74.7 5.1 0.00017 34.8 6.0 57 61-120 143-200 (330)
110 2b5w_A Glucose dehydrogenase; 74.1 10 0.00034 33.3 7.9 50 69-119 174-226 (357)
111 3qk7_A Transcriptional regulat 74.1 37 0.0013 28.2 15.6 46 163-211 177-226 (294)
112 3uf0_A Short-chain dehydrogena 74.0 20 0.00067 30.1 9.5 54 69-122 32-85 (273)
113 2q2v_A Beta-D-hydroxybutyrate 73.5 23 0.00078 29.2 9.7 53 69-122 5-57 (255)
114 1cdo_A Alcohol dehydrogenase; 73.5 20 0.00068 31.5 9.8 56 61-119 186-241 (374)
115 1e3i_A Alcohol dehydrogenase, 73.1 20 0.00067 31.6 9.6 56 61-119 189-244 (376)
116 4fc7_A Peroxisomal 2,4-dienoyl 72.8 33 0.0011 28.6 10.7 30 70-99 29-58 (277)
117 1uuf_A YAHK, zinc-type alcohol 72.7 11 0.00037 33.4 7.8 58 60-121 187-244 (369)
118 3gxh_A Putative phosphatase (D 72.5 23 0.0008 27.1 8.9 80 103-184 28-107 (157)
119 2cdc_A Glucose dehydrogenase g 71.8 14 0.00049 32.4 8.4 51 68-119 181-231 (366)
120 4gkb_A 3-oxoacyl-[acyl-carrier 71.7 19 0.00065 30.3 8.8 55 68-122 7-61 (258)
121 2jhf_A Alcohol dehydrogenase E 71.5 23 0.00077 31.2 9.7 56 61-119 185-240 (374)
122 1duv_G Octase-1, ornithine tra 71.2 17 0.0006 32.0 8.6 52 71-122 157-216 (333)
123 1vlj_A NADH-dependent butanol 70.4 43 0.0015 30.1 11.3 112 93-211 20-153 (407)
124 4egf_A L-xylulose reductase; s 69.9 41 0.0014 27.9 10.5 30 70-99 22-51 (266)
125 3nx4_A Putative oxidoreductase 69.8 9.1 0.00031 33.0 6.5 54 65-121 143-197 (324)
126 3h7a_A Short chain dehydrogena 69.4 42 0.0014 27.5 10.4 54 69-122 8-62 (252)
127 2i6u_A Otcase, ornithine carba 69.3 17 0.00058 31.7 8.0 52 71-122 150-209 (307)
128 4ekn_B Aspartate carbamoyltran 69.3 14 0.00047 32.3 7.4 52 71-122 153-210 (306)
129 1ml4_A Aspartate transcarbamoy 69.3 7.5 0.00026 34.0 5.7 60 61-122 149-213 (308)
130 3o26_A Salutaridine reductase; 69.0 50 0.0017 27.5 11.2 25 161-186 79-103 (311)
131 3tpf_A Otcase, ornithine carba 69.0 33 0.0011 29.8 9.8 60 62-122 140-206 (307)
132 2fzw_A Alcohol dehydrogenase c 68.9 20 0.00068 31.5 8.7 56 61-119 184-239 (373)
133 1vlv_A Otcase, ornithine carba 68.9 13 0.00046 32.6 7.3 52 71-122 169-228 (325)
134 1piw_A Hypothetical zinc-type 68.6 14 0.00047 32.5 7.5 58 59-120 171-228 (360)
135 3tox_A Short chain dehydrogena 68.5 52 0.0018 27.6 11.7 29 69-97 9-37 (280)
136 3l77_A Short-chain alcohol deh 68.5 38 0.0013 27.2 9.8 30 70-99 4-33 (235)
137 1wwk_A Phosphoglycerate dehydr 67.3 40 0.0014 29.0 10.1 105 70-198 143-249 (307)
138 1dxh_A Ornithine carbamoyltran 67.2 18 0.00061 32.0 7.7 52 71-122 157-216 (335)
139 3s8m_A Enoyl-ACP reductase; ro 66.5 39 0.0013 30.8 10.1 80 41-122 35-129 (422)
140 3f1l_A Uncharacterized oxidore 66.4 52 0.0018 26.9 10.7 30 69-98 13-42 (252)
141 3uve_A Carveol dehydrogenase ( 66.2 45 0.0015 27.8 10.1 31 69-99 12-42 (286)
142 3e03_A Short chain dehydrogena 66.0 51 0.0018 27.4 10.4 54 69-122 7-68 (274)
143 4dry_A 3-oxoacyl-[acyl-carrier 65.8 50 0.0017 27.7 10.3 29 70-98 35-63 (281)
144 3kvo_A Hydroxysteroid dehydrog 64.6 54 0.0019 28.6 10.6 54 69-122 46-107 (346)
145 2ekl_A D-3-phosphoglycerate de 64.2 66 0.0022 27.7 10.9 104 70-197 143-248 (313)
146 1pvv_A Otcase, ornithine carba 63.6 20 0.00068 31.4 7.3 59 62-122 150-215 (315)
147 2izz_A Pyrroline-5-carboxylate 63.6 71 0.0024 27.4 13.1 119 72-212 25-147 (322)
148 3huu_A Transcription regulator 63.4 64 0.0022 26.8 17.4 156 47-210 41-240 (305)
149 3o74_A Fructose transport syst 63.2 59 0.002 26.3 16.6 47 162-210 168-217 (272)
150 2w37_A Ornithine carbamoyltran 63.2 14 0.00049 32.9 6.4 52 71-122 178-237 (359)
151 2ew8_A (S)-1-phenylethanol deh 63.2 53 0.0018 26.7 9.8 53 69-122 8-60 (249)
152 3gg9_A D-3-phosphoglycerate de 62.8 32 0.0011 30.5 8.7 106 70-198 161-268 (352)
153 4fcc_A Glutamate dehydrogenase 62.6 45 0.0015 30.7 9.7 50 50-99 216-265 (450)
154 3edm_A Short chain dehydrogena 62.4 40 0.0014 27.8 8.9 54 69-122 9-64 (259)
155 3csu_A Protein (aspartate carb 62.0 20 0.00069 31.2 7.1 52 71-122 156-213 (310)
156 3k9c_A Transcriptional regulat 62.0 66 0.0023 26.5 16.4 37 173-211 184-224 (289)
157 2cf5_A Atccad5, CAD, cinnamyl 61.9 25 0.00087 30.7 7.9 55 63-121 175-231 (357)
158 2h6e_A ADH-4, D-arabinose 1-de 61.9 23 0.00078 30.7 7.6 51 64-119 168-220 (344)
159 3lf2_A Short chain oxidoreduct 61.6 67 0.0023 26.4 12.0 31 69-99 9-39 (265)
160 3u5t_A 3-oxoacyl-[acyl-carrier 61.2 56 0.0019 27.1 9.7 53 70-122 29-83 (267)
161 3kkj_A Amine oxidase, flavin-c 61.2 9.2 0.00031 30.4 4.5 29 72-100 5-33 (336)
162 3afn_B Carbonyl reductase; alp 61.1 62 0.0021 26.1 9.8 54 69-122 8-63 (258)
163 1zq6_A Otcase, ornithine carba 60.9 24 0.00081 31.5 7.4 44 79-122 207-257 (359)
164 3d4o_A Dipicolinate synthase s 60.5 65 0.0022 27.2 10.1 46 71-119 157-202 (293)
165 4ep1_A Otcase, ornithine carba 60.3 22 0.00074 31.5 7.0 51 72-122 182-239 (340)
166 1sby_A Alcohol dehydrogenase; 60.2 57 0.002 26.5 9.5 53 69-122 6-61 (254)
167 1g0o_A Trihydroxynaphthalene r 60.0 39 0.0013 28.2 8.5 53 70-122 31-85 (283)
168 3a28_C L-2.3-butanediol dehydr 59.9 38 0.0013 27.8 8.4 53 70-122 4-59 (258)
169 3ijr_A Oxidoreductase, short c 59.9 44 0.0015 28.2 8.9 54 69-122 48-103 (291)
170 3gem_A Short chain dehydrogena 59.9 60 0.002 26.8 9.6 68 70-140 29-96 (260)
171 3qiv_A Short-chain dehydrogena 59.7 53 0.0018 26.6 9.2 54 69-122 10-64 (253)
172 3tsc_A Putative oxidoreductase 59.5 75 0.0026 26.3 10.9 31 69-99 12-42 (277)
173 3is3_A 17BETA-hydroxysteroid d 59.4 45 0.0015 27.6 8.8 54 69-122 19-74 (270)
174 3r1i_A Short-chain type dehydr 59.4 50 0.0017 27.6 9.1 54 69-122 33-87 (276)
175 2gk4_A Conserved hypothetical 59.3 16 0.00054 30.5 5.6 58 77-141 28-85 (232)
176 4a27_A Synaptic vesicle membra 59.3 27 0.00093 30.3 7.6 56 61-121 136-192 (349)
177 3v2h_A D-beta-hydroxybutyrate 59.2 78 0.0027 26.4 12.3 29 70-98 27-55 (281)
178 3ic5_A Putative saccharopine d 59.1 39 0.0013 23.5 7.3 48 72-122 8-56 (118)
179 4dvj_A Putative zinc-dependent 59.0 37 0.0013 29.7 8.5 51 67-120 171-222 (363)
180 3h75_A Periplasmic sugar-bindi 59.0 84 0.0029 26.7 16.1 46 163-211 195-244 (350)
181 2ae2_A Protein (tropinone redu 58.8 55 0.0019 26.8 9.2 54 69-122 10-64 (260)
182 2e7j_A SEP-tRNA:Cys-tRNA synth 58.8 30 0.001 29.7 7.7 51 71-122 71-121 (371)
183 3nrc_A Enoyl-[acyl-carrier-pro 58.4 44 0.0015 27.8 8.6 69 70-140 28-100 (280)
184 3oid_A Enoyl-[acyl-carrier-pro 57.8 49 0.0017 27.3 8.7 54 69-122 5-60 (258)
185 1lnq_A MTHK channels, potassiu 57.7 56 0.0019 28.1 9.3 49 71-124 117-165 (336)
186 3ek2_A Enoyl-(acyl-carrier-pro 57.5 32 0.0011 28.2 7.5 72 69-141 15-90 (271)
187 3icc_A Putative 3-oxoacyl-(acy 57.5 74 0.0025 25.7 9.8 54 69-122 8-63 (255)
188 2hq1_A Glucose/ribitol dehydro 57.2 73 0.0025 25.5 10.0 54 69-122 6-61 (247)
189 1yqd_A Sinapyl alcohol dehydro 57.1 39 0.0013 29.6 8.3 53 64-120 183-237 (366)
190 2r6j_A Eugenol synthase 1; phe 57.0 45 0.0015 28.1 8.5 54 70-123 13-67 (318)
191 1a3w_A Pyruvate kinase; allost 56.9 86 0.0029 29.2 10.7 124 84-213 283-429 (500)
192 1x13_A NAD(P) transhydrogenase 56.9 19 0.00066 32.4 6.2 47 71-120 174-220 (401)
193 3awd_A GOX2181, putative polyo 56.9 48 0.0017 26.9 8.4 54 69-122 14-68 (260)
194 3qp9_A Type I polyketide synth 56.7 47 0.0016 31.0 9.1 59 65-123 248-322 (525)
195 3rkr_A Short chain oxidoreduct 56.5 54 0.0018 27.0 8.7 54 69-122 30-84 (262)
196 3nyw_A Putative oxidoreductase 56.4 81 0.0028 25.7 10.6 31 69-99 8-38 (250)
197 3zu3_A Putative reductase YPO4 56.4 1.1E+02 0.0039 27.5 12.9 100 40-141 20-135 (405)
198 3oec_A Carveol dehydrogenase ( 56.4 93 0.0032 26.4 11.6 31 69-99 47-77 (317)
199 3ezl_A Acetoacetyl-COA reducta 56.3 37 0.0013 27.7 7.6 73 69-141 14-89 (256)
200 3v2g_A 3-oxoacyl-[acyl-carrier 56.3 62 0.0021 26.9 9.1 54 69-122 32-87 (271)
201 3lyl_A 3-oxoacyl-(acyl-carrier 56.2 46 0.0016 26.9 8.2 54 69-122 6-60 (247)
202 4iin_A 3-ketoacyl-acyl carrier 56.0 49 0.0017 27.3 8.4 54 69-122 30-85 (271)
203 3grf_A Ornithine carbamoyltran 55.9 48 0.0016 29.1 8.4 51 72-122 164-226 (328)
204 3s55_A Putative short-chain de 55.9 39 0.0013 28.1 7.8 54 69-122 11-77 (281)
205 2fr1_A Erythromycin synthase, 55.8 60 0.002 29.9 9.6 58 65-122 223-285 (486)
206 3get_A Histidinol-phosphate am 55.7 38 0.0013 29.0 7.9 51 72-123 85-135 (365)
207 2g1u_A Hypothetical protein TM 55.6 12 0.0004 28.5 4.0 97 71-209 21-119 (155)
208 3sc4_A Short chain dehydrogena 55.6 80 0.0027 26.3 9.8 54 69-122 10-71 (285)
209 4hy3_A Phosphoglycerate oxidor 55.5 66 0.0023 28.6 9.5 114 70-210 177-292 (365)
210 4imr_A 3-oxoacyl-(acyl-carrier 55.5 57 0.0019 27.2 8.8 54 69-122 34-88 (275)
211 4e3z_A Putative oxidoreductase 55.4 68 0.0023 26.4 9.2 54 70-123 28-83 (272)
212 2jah_A Clavulanic acid dehydro 55.3 57 0.0019 26.6 8.6 54 69-122 8-62 (247)
213 3qlj_A Short chain dehydrogena 55.3 60 0.0021 27.7 9.1 55 69-123 28-93 (322)
214 2g76_A 3-PGDH, D-3-phosphoglyc 55.1 79 0.0027 27.6 9.8 104 70-197 166-271 (335)
215 4dmm_A 3-oxoacyl-[acyl-carrier 55.1 31 0.0011 28.7 7.0 54 69-122 29-84 (269)
216 2z5l_A Tylkr1, tylactone synth 55.0 64 0.0022 30.0 9.7 58 65-122 256-318 (511)
217 2dbq_A Glyoxylate reductase; D 55.0 86 0.003 27.2 10.1 104 70-197 151-256 (334)
218 1sny_A Sniffer CG10964-PA; alp 54.9 33 0.0011 28.2 7.0 52 70-121 23-77 (267)
219 3k4h_A Putative transcriptiona 54.7 87 0.003 25.6 19.2 36 173-210 191-230 (292)
220 1leh_A Leucine dehydrogenase; 54.6 50 0.0017 29.4 8.5 46 70-118 174-220 (364)
221 3ly1_A Putative histidinol-pho 54.5 28 0.00095 29.7 6.8 53 71-124 70-122 (354)
222 1yb1_A 17-beta-hydroxysteroid 54.4 54 0.0019 27.1 8.4 54 69-122 32-86 (272)
223 3tjr_A Short chain dehydrogena 54.4 55 0.0019 27.7 8.6 54 69-122 32-86 (301)
224 3grk_A Enoyl-(acyl-carrier-pro 54.3 34 0.0012 29.0 7.2 33 69-101 32-66 (293)
225 3ksu_A 3-oxoacyl-acyl carrier 54.2 63 0.0022 26.6 8.8 72 69-140 12-88 (262)
226 4da9_A Short-chain dehydrogena 54.2 32 0.0011 28.9 6.9 54 69-122 30-85 (280)
227 3f9t_A TDC, L-tyrosine decarbo 54.1 54 0.0018 28.1 8.7 54 71-124 88-153 (397)
228 2c07_A 3-oxoacyl-(acyl-carrier 53.9 29 0.001 29.0 6.7 54 69-122 45-99 (285)
229 3gyb_A Transcriptional regulat 53.9 88 0.003 25.4 10.1 116 91-210 78-214 (280)
230 3tfo_A Putative 3-oxoacyl-(acy 53.8 58 0.002 27.0 8.5 54 69-122 5-59 (264)
231 2gas_A Isoflavone reductase; N 53.8 28 0.00097 29.1 6.6 54 70-123 4-64 (307)
232 3hcw_A Maltose operon transcri 53.8 93 0.0032 25.7 16.8 46 163-210 179-230 (295)
233 4g2n_A D-isomer specific 2-hyd 53.7 63 0.0022 28.4 9.0 104 70-197 174-279 (345)
234 2aef_A Calcium-gated potassium 53.7 85 0.0029 25.2 10.1 48 71-123 11-58 (234)
235 1l7d_A Nicotinamide nucleotide 53.5 25 0.00084 31.4 6.4 46 71-119 174-219 (384)
236 3ucx_A Short chain dehydrogena 53.4 63 0.0022 26.6 8.7 73 69-141 12-86 (264)
237 1gdh_A D-glycerate dehydrogena 53.3 93 0.0032 26.8 10.0 106 70-197 147-254 (320)
238 4iiu_A 3-oxoacyl-[acyl-carrier 53.3 58 0.002 26.8 8.4 53 70-122 28-82 (267)
239 3e8x_A Putative NAD-dependent 53.3 36 0.0012 27.4 6.9 52 69-123 22-74 (236)
240 3aoe_E Glutamate dehydrogenase 53.1 62 0.0021 29.4 9.0 51 50-101 199-250 (419)
241 3m6i_A L-arabinitol 4-dehydrog 53.0 21 0.00072 31.2 5.8 53 59-114 171-223 (363)
242 3cq5_A Histidinol-phosphate am 52.9 29 0.00098 30.0 6.6 53 71-124 94-146 (369)
243 3rot_A ABC sugar transporter, 52.9 96 0.0033 25.6 16.8 148 53-211 51-228 (297)
244 3osu_A 3-oxoacyl-[acyl-carrier 52.4 62 0.0021 26.3 8.3 53 70-122 6-60 (246)
245 2rir_A Dipicolinate synthase, 52.2 54 0.0018 27.9 8.2 45 71-118 159-203 (300)
246 3i6i_A Putative leucoanthocyan 52.2 54 0.0019 28.1 8.3 54 70-123 12-69 (346)
247 3gaf_A 7-alpha-hydroxysteroid 52.1 50 0.0017 27.1 7.8 54 69-122 13-67 (256)
248 2rhc_B Actinorhodin polyketide 52.1 62 0.0021 26.9 8.4 54 69-122 23-77 (277)
249 3sju_A Keto reductase; short-c 52.0 57 0.002 27.2 8.2 53 70-122 26-79 (279)
250 1ae1_A Tropinone reductase-I; 51.9 67 0.0023 26.6 8.6 54 69-122 22-76 (273)
251 3r3s_A Oxidoreductase; structu 51.5 54 0.0018 27.6 8.0 55 69-123 50-107 (294)
252 4eue_A Putative reductase CA_C 51.3 1.4E+02 0.0048 26.9 12.9 100 40-141 34-149 (418)
253 3oig_A Enoyl-[acyl-carrier-pro 51.3 73 0.0025 26.0 8.7 32 69-100 8-41 (266)
254 2dq4_A L-threonine 3-dehydroge 51.2 50 0.0017 28.5 7.9 52 62-119 160-212 (343)
255 3l49_A ABC sugar (ribose) tran 51.0 1E+02 0.0034 25.2 19.8 149 53-210 51-226 (291)
256 3slk_A Polyketide synthase ext 50.9 67 0.0023 31.7 9.5 57 66-122 528-590 (795)
257 2yfk_A Aspartate/ornithine car 50.9 21 0.00074 32.5 5.5 44 79-122 206-255 (418)
258 1edo_A Beta-keto acyl carrier 50.9 71 0.0024 25.5 8.5 53 70-122 3-57 (244)
259 3bfj_A 1,3-propanediol oxidore 50.7 71 0.0024 28.3 9.0 112 93-211 10-144 (387)
260 3pgx_A Carveol dehydrogenase; 50.7 50 0.0017 27.5 7.6 54 69-122 16-83 (280)
261 1id1_A Putative potassium chan 50.6 71 0.0024 23.7 7.9 96 72-208 6-105 (153)
262 1ja9_A 4HNR, 1,3,6,8-tetrahydr 50.6 43 0.0015 27.5 7.1 54 69-122 22-77 (274)
263 1geg_A Acetoin reductase; SDR 50.2 73 0.0025 26.0 8.5 53 70-122 4-57 (256)
264 1bgv_A Glutamate dehydrogenase 50.0 72 0.0025 29.3 8.9 51 50-101 211-262 (449)
265 3ip1_A Alcohol dehydrogenase, 50.0 1.3E+02 0.0043 26.6 10.6 88 106-209 228-319 (404)
266 3ucx_A Short chain dehydrogena 49.8 1.1E+02 0.0036 25.1 10.4 85 94-184 12-98 (264)
267 1u7z_A Coenzyme A biosynthesis 49.7 24 0.00081 29.3 5.2 24 77-100 33-56 (226)
268 2pi1_A D-lactate dehydrogenase 49.6 76 0.0026 27.7 8.8 113 71-210 143-257 (334)
269 3q98_A Transcarbamylase; rossm 49.6 34 0.0011 31.0 6.5 44 79-122 209-258 (399)
270 1fmc_A 7 alpha-hydroxysteroid 49.6 54 0.0018 26.5 7.5 54 69-122 12-66 (255)
271 3ce6_A Adenosylhomocysteinase; 49.5 57 0.0019 30.3 8.3 97 63-187 269-365 (494)
272 3imf_A Short chain dehydrogena 49.2 38 0.0013 27.9 6.5 54 69-122 7-61 (257)
273 3cs3_A Sugar-binding transcrip 49.2 1.1E+02 0.0036 24.9 11.1 34 173-208 176-213 (277)
274 3t7c_A Carveol dehydrogenase; 49.1 57 0.002 27.5 7.8 54 69-122 29-95 (299)
275 3u0b_A Oxidoreductase, short c 49.1 66 0.0023 29.3 8.6 71 69-140 214-284 (454)
276 1zem_A Xylitol dehydrogenase; 48.9 72 0.0025 26.1 8.3 54 69-122 8-62 (262)
277 3gvx_A Glycerate dehydrogenase 48.9 33 0.0011 29.4 6.2 102 70-198 123-226 (290)
278 1p9o_A Phosphopantothenoylcyst 48.9 15 0.00051 32.2 4.0 103 75-183 62-182 (313)
279 3cxt_A Dehydrogenase with diff 48.8 59 0.002 27.4 7.8 53 69-121 35-88 (291)
280 3gd5_A Otcase, ornithine carba 48.7 61 0.0021 28.4 7.9 51 72-122 160-217 (323)
281 2uvd_A 3-oxoacyl-(acyl-carrier 48.6 47 0.0016 27.0 7.0 54 69-122 5-60 (246)
282 3grk_A Enoyl-(acyl-carrier-pro 48.4 1.2E+02 0.0041 25.4 10.3 88 92-186 30-121 (293)
283 2bkw_A Alanine-glyoxylate amin 48.3 40 0.0014 29.0 6.8 53 70-123 60-117 (385)
284 3v8b_A Putative dehydrogenase, 48.3 65 0.0022 27.0 8.0 53 70-122 30-83 (283)
285 1mxh_A Pteridine reductase 2; 47.9 1.1E+02 0.0039 25.0 11.8 30 70-99 13-42 (276)
286 1gee_A Glucose 1-dehydrogenase 47.7 83 0.0028 25.5 8.5 54 69-122 8-63 (261)
287 2tmg_A Protein (glutamate dehy 47.6 1.1E+02 0.0037 27.7 9.7 51 50-101 190-242 (415)
288 3aog_A Glutamate dehydrogenase 47.5 84 0.0029 28.7 8.9 51 50-101 216-267 (440)
289 4amu_A Ornithine carbamoyltran 47.4 39 0.0013 30.2 6.5 52 71-122 182-243 (365)
290 3oig_A Enoyl-[acyl-carrier-pro 47.4 1.1E+02 0.0039 24.8 10.1 17 248-264 222-238 (266)
291 2bma_A Glutamate dehydrogenase 47.2 63 0.0021 29.9 8.0 51 50-101 233-284 (470)
292 4e4t_A Phosphoribosylaminoimid 47.1 38 0.0013 30.5 6.6 37 65-102 32-68 (419)
293 3svt_A Short-chain type dehydr 47.0 96 0.0033 25.7 8.9 54 69-122 12-69 (281)
294 2zat_A Dehydrogenase/reductase 47.0 73 0.0025 26.0 8.0 53 69-121 15-68 (260)
295 3sds_A Ornithine carbamoyltran 46.8 24 0.00084 31.3 5.1 52 71-122 190-250 (353)
296 3imf_A Short chain dehydrogena 46.7 1E+02 0.0035 25.1 8.9 85 94-184 7-93 (257)
297 1zmt_A Haloalcohol dehalogenas 46.7 29 0.00098 28.5 5.3 65 71-136 4-68 (254)
298 3ffh_A Histidinol-phosphate am 46.6 22 0.00074 30.6 4.8 52 72-124 87-138 (363)
299 1gud_A ALBP, D-allose-binding 46.6 1E+02 0.0034 25.4 8.9 49 158-210 179-229 (288)
300 4e5n_A Thermostable phosphite 46.5 58 0.002 28.4 7.5 105 70-197 146-252 (330)
301 2qq5_A DHRS1, dehydrogenase/re 46.5 73 0.0025 26.0 7.9 54 69-122 6-60 (260)
302 3ksm_A ABC-type sugar transpor 46.4 1.1E+02 0.0039 24.5 18.1 149 53-210 48-223 (276)
303 3jtm_A Formate dehydrogenase, 46.4 1.5E+02 0.0052 26.0 11.3 116 70-209 165-282 (351)
304 3hut_A Putative branched-chain 46.2 1.3E+02 0.0046 25.3 11.4 136 70-212 74-231 (358)
305 3gaf_A 7-alpha-hydroxysteroid 46.1 1.1E+02 0.0038 24.9 9.0 86 94-185 13-100 (256)
306 3qiv_A Short-chain dehydrogena 45.9 1.2E+02 0.004 24.5 9.8 85 94-184 10-96 (253)
307 2j6i_A Formate dehydrogenase; 45.7 93 0.0032 27.5 8.8 106 70-197 165-273 (364)
308 2hmt_A YUAA protein; RCK, KTN, 45.7 35 0.0012 24.7 5.3 44 72-118 9-52 (144)
309 3sx2_A Putative 3-ketoacyl-(ac 45.6 58 0.002 26.9 7.2 54 69-122 14-80 (278)
310 3rwb_A TPLDH, pyridoxal 4-dehy 45.4 1E+02 0.0036 24.9 8.7 52 69-122 7-58 (247)
311 1lss_A TRK system potassium up 45.4 81 0.0028 22.5 7.8 29 72-100 7-35 (140)
312 3grp_A 3-oxoacyl-(acyl carrier 45.2 76 0.0026 26.3 7.9 52 69-122 28-79 (266)
313 4hp8_A 2-deoxy-D-gluconate 3-d 45.1 66 0.0022 26.9 7.3 54 68-122 9-62 (247)
314 4ggo_A Trans-2-enoyl-COA reduc 45.0 60 0.002 29.3 7.4 73 69-141 51-137 (401)
315 1vl8_A Gluconate 5-dehydrogena 45.0 81 0.0028 26.0 8.0 54 69-122 22-77 (267)
316 3ged_A Short-chain dehydrogena 44.6 1.1E+02 0.0038 25.3 8.7 50 70-122 4-53 (247)
317 1xg5_A ARPG836; short chain de 44.5 1.3E+02 0.0043 24.8 9.2 53 69-121 33-88 (279)
318 3ctm_A Carbonyl reductase; alc 44.3 96 0.0033 25.5 8.4 53 70-122 36-89 (279)
319 3o38_A Short chain dehydrogena 44.3 1.3E+02 0.0044 24.5 9.3 30 70-99 24-54 (266)
320 3rkr_A Short chain oxidoreduct 44.0 1.3E+02 0.0044 24.5 9.8 85 94-184 30-116 (262)
321 3d3j_A Enhancer of mRNA-decapp 44.0 93 0.0032 26.8 8.3 32 70-101 134-168 (306)
322 3k7y_A Aspartate aminotransfer 44.0 1.4E+02 0.0047 26.5 9.8 77 43-123 71-151 (405)
323 1qyc_A Phenylcoumaran benzylic 43.9 75 0.0026 26.4 7.7 53 70-122 6-64 (308)
324 1x1t_A D(-)-3-hydroxybutyrate 43.9 88 0.003 25.5 8.0 54 69-122 5-61 (260)
325 2bm8_A Cephalosporin hydroxyla 43.9 75 0.0026 25.8 7.5 48 164-212 73-120 (236)
326 3egc_A Putative ribose operon 43.7 1.3E+02 0.0045 24.5 18.7 37 173-211 185-225 (291)
327 3ksu_A 3-oxoacyl-acyl carrier 43.7 98 0.0033 25.4 8.3 88 94-184 12-101 (262)
328 3pxx_A Carveol dehydrogenase; 43.5 79 0.0027 26.1 7.8 54 69-122 11-77 (287)
329 3nrc_A Enoyl-[acyl-carrier-pro 43.5 1.2E+02 0.0042 25.0 9.0 84 94-185 27-114 (280)
330 3k92_A NAD-GDH, NAD-specific g 43.4 54 0.0018 29.9 6.9 51 50-101 202-253 (424)
331 1xq1_A Putative tropinone redu 43.2 86 0.0029 25.5 7.9 54 69-122 15-69 (266)
332 3ged_A Short-chain dehydrogena 43.1 1.3E+02 0.0045 24.8 9.0 82 94-185 3-86 (247)
333 3q2o_A Phosphoribosylaminoimid 43.0 37 0.0013 30.0 5.8 35 66-101 12-46 (389)
334 3gv0_A Transcriptional regulat 42.8 1.4E+02 0.0047 24.4 19.0 45 164-211 179-227 (288)
335 3c1o_A Eugenol synthase; pheny 42.6 49 0.0017 27.9 6.3 54 70-123 6-65 (321)
336 2h78_A Hibadh, 3-hydroxyisobut 42.4 65 0.0022 27.1 7.1 44 71-117 5-48 (302)
337 3d3k_A Enhancer of mRNA-decapp 42.4 82 0.0028 26.5 7.6 32 70-101 87-121 (259)
338 3v8b_A Putative dehydrogenase, 42.4 1.4E+02 0.0048 24.8 9.2 86 94-185 29-116 (283)
339 1gtm_A Glutamate dehydrogenase 42.2 81 0.0028 28.6 8.0 51 50-101 192-245 (419)
340 1wma_A Carbonyl reductase [NAD 42.2 80 0.0027 25.6 7.5 53 69-121 5-59 (276)
341 3k31_A Enoyl-(acyl-carrier-pro 42.1 1.4E+02 0.0046 25.1 9.1 30 70-99 32-63 (296)
342 3mje_A AMPHB; rossmann fold, o 42.0 1.6E+02 0.0055 27.2 10.1 55 69-123 240-299 (496)
343 3tfo_A Putative 3-oxoacyl-(acy 41.9 1.5E+02 0.005 24.5 10.0 86 94-185 5-92 (264)
344 3orq_A N5-carboxyaminoimidazol 41.9 40 0.0014 29.7 5.8 34 67-101 11-44 (377)
345 3kzv_A Uncharacterized oxidore 41.9 53 0.0018 26.9 6.3 52 70-122 4-56 (254)
346 2fn9_A Ribose ABC transporter, 41.8 81 0.0028 25.8 7.5 44 163-209 181-225 (290)
347 1qyd_A Pinoresinol-lariciresin 41.8 49 0.0017 27.7 6.2 53 70-122 6-63 (313)
348 3l6u_A ABC-type sugar transpor 41.6 1.4E+02 0.0048 24.2 17.8 46 163-211 185-231 (293)
349 3ai3_A NADPH-sorbose reductase 41.6 1.1E+02 0.0036 25.0 8.2 32 69-100 8-39 (263)
350 3gdg_A Probable NADP-dependent 41.5 1.4E+02 0.0047 24.2 8.9 32 70-101 22-55 (267)
351 1hdc_A 3-alpha, 20 beta-hydrox 41.4 1.2E+02 0.0043 24.5 8.6 50 69-121 6-56 (254)
352 3ijr_A Oxidoreductase, short c 41.4 1.5E+02 0.0053 24.6 9.4 87 94-185 48-136 (291)
353 1pg5_A Aspartate carbamoyltran 41.4 18 0.0006 31.5 3.2 50 71-122 151-205 (299)
354 1oth_A Protein (ornithine tran 41.3 34 0.0012 29.9 5.1 51 72-122 158-215 (321)
355 1vjo_A Alanine--glyoxylate ami 41.2 49 0.0017 28.6 6.3 52 71-123 87-140 (393)
356 2pd4_A Enoyl-[acyl-carrier-pro 41.2 1.1E+02 0.0036 25.3 8.2 72 69-141 7-82 (275)
357 3l6e_A Oxidoreductase, short-c 41.0 1.2E+02 0.0042 24.3 8.4 31 70-100 5-35 (235)
358 4dll_A 2-hydroxy-3-oxopropiona 41.0 78 0.0027 27.1 7.5 44 71-117 33-76 (320)
359 3rih_A Short chain dehydrogena 40.9 98 0.0034 26.1 8.0 53 69-121 42-96 (293)
360 2ywl_A Thioredoxin reductase r 40.8 44 0.0015 25.5 5.3 32 71-102 3-34 (180)
361 3ipc_A ABC transporter, substr 40.7 1.6E+02 0.0056 24.7 11.0 148 53-212 59-230 (356)
362 3b8x_A WBDK, pyridoxamine 5-ph 40.7 70 0.0024 27.7 7.3 53 72-124 52-110 (390)
363 3r3j_A Glutamate dehydrogenase 40.7 93 0.0032 28.6 8.1 52 49-100 219-270 (456)
364 1mx3_A CTBP1, C-terminal bindi 40.6 1.2E+02 0.0041 26.5 8.7 105 70-197 169-275 (347)
365 3ek2_A Enoyl-(acyl-carrier-pro 40.5 1.2E+02 0.0041 24.6 8.3 84 94-185 15-103 (271)
366 3oz2_A Digeranylgeranylglycero 40.3 28 0.00097 30.0 4.5 28 72-99 7-34 (397)
367 3p2y_A Alanine dehydrogenase/p 40.3 45 0.0015 29.9 5.8 48 71-121 186-233 (381)
368 4hvk_A Probable cysteine desul 40.3 42 0.0014 28.6 5.6 54 71-124 62-121 (382)
369 3u9l_A 3-oxoacyl-[acyl-carrier 40.2 1.6E+02 0.0053 25.2 9.3 53 70-122 7-65 (324)
370 4a8t_A Putrescine carbamoyltra 40.0 99 0.0034 27.2 7.9 51 72-122 178-235 (339)
371 3dzz_A Putative pyridoxal 5'-p 40.0 56 0.0019 28.1 6.4 52 71-123 87-138 (391)
372 3a11_A Translation initiation 40.0 73 0.0025 28.0 7.1 59 64-123 138-200 (338)
373 1eg5_A Aminotransferase; PLP-d 39.9 42 0.0014 28.7 5.6 53 71-123 63-121 (384)
374 4e6p_A Probable sorbitol dehyd 39.8 1.2E+02 0.004 24.8 8.2 71 69-141 9-80 (259)
375 3sju_A Keto reductase; short-c 39.8 1.6E+02 0.0054 24.3 9.6 86 94-185 25-112 (279)
376 2ph3_A 3-oxoacyl-[acyl carrier 39.6 90 0.0031 24.9 7.3 51 70-120 3-55 (245)
377 3rss_A Putative uncharacterize 39.6 1E+02 0.0036 28.6 8.4 51 69-119 53-110 (502)
378 1jzt_A Hypothetical 27.5 kDa p 39.5 91 0.0031 25.9 7.4 32 70-101 60-94 (246)
379 4hb9_A Similarities with proba 39.5 31 0.0011 30.0 4.7 29 71-99 3-31 (412)
380 4eso_A Putative oxidoreductase 39.4 1.2E+02 0.0041 24.7 8.2 51 69-122 9-60 (255)
381 3gk3_A Acetoacetyl-COA reducta 39.3 91 0.0031 25.6 7.4 53 70-122 27-81 (269)
382 3pk0_A Short-chain dehydrogena 39.3 93 0.0032 25.5 7.5 54 69-122 11-66 (262)
383 4dgs_A Dehydrogenase; structur 39.3 1.3E+02 0.0044 26.3 8.6 93 70-189 172-264 (340)
384 3k31_A Enoyl-(acyl-carrier-pro 39.2 94 0.0032 26.1 7.6 16 249-264 244-259 (296)
385 1h5q_A NADP-dependent mannitol 39.2 1E+02 0.0034 24.9 7.7 53 70-122 16-70 (265)
386 3euc_A Histidinol-phosphate am 39.2 20 0.00068 30.9 3.3 52 71-124 87-139 (367)
387 3g0o_A 3-hydroxyisobutyrate de 38.8 77 0.0026 26.8 7.0 45 71-118 9-53 (303)
388 2cul_A Glucose-inhibited divis 38.8 34 0.0012 27.7 4.5 30 72-101 6-35 (232)
389 2gcg_A Glyoxylate reductase/hy 38.7 1.9E+02 0.0065 24.9 11.9 105 70-197 156-262 (330)
390 3rku_A Oxidoreductase YMR226C; 38.6 1.3E+02 0.0043 25.2 8.3 24 70-93 35-58 (287)
391 3tzq_B Short-chain type dehydr 38.6 1.6E+02 0.0056 24.1 10.7 34 69-102 12-45 (271)
392 3kax_A Aminotransferase, class 38.5 1.6E+02 0.0056 24.9 9.3 52 71-123 84-135 (383)
393 3n74_A 3-ketoacyl-(acyl-carrie 38.5 1.4E+02 0.0047 24.2 8.4 51 69-122 10-61 (261)
394 1xu9_A Corticosteroid 11-beta- 38.4 1.2E+02 0.0041 25.1 8.1 31 70-100 30-60 (286)
395 4gcm_A TRXR, thioredoxin reduc 38.4 33 0.0011 28.9 4.5 28 72-99 9-36 (312)
396 3nra_A Aspartate aminotransfer 38.4 1.6E+02 0.0053 25.3 9.2 51 72-123 105-155 (407)
397 3zv4_A CIS-2,3-dihydrobiphenyl 38.4 1.6E+02 0.0056 24.3 9.0 51 69-122 6-57 (281)
398 2wm3_A NMRA-like family domain 38.4 1.2E+02 0.004 25.2 8.0 53 70-123 7-60 (299)
399 2vdc_G Glutamate synthase [NAD 38.3 1.1E+02 0.0037 27.8 8.3 51 70-120 265-321 (456)
400 1iy8_A Levodione reductase; ox 38.3 1.1E+02 0.0039 24.9 7.9 32 69-100 14-45 (267)
401 1qsg_A Enoyl-[acyl-carrier-pro 38.3 1.4E+02 0.005 24.2 8.6 54 70-123 11-68 (265)
402 4a8p_A Putrescine carbamoyltra 38.3 1.1E+02 0.0036 27.2 7.8 51 72-122 156-213 (355)
403 4dqx_A Probable oxidoreductase 38.3 1.4E+02 0.0049 24.7 8.6 51 69-122 28-79 (277)
404 3lyl_A 3-oxoacyl-(acyl-carrier 38.3 1.5E+02 0.0052 23.6 9.5 86 94-185 6-93 (247)
405 3ado_A Lambda-crystallin; L-gu 38.2 36 0.0012 29.7 4.7 132 70-214 7-151 (319)
406 3ioy_A Short-chain dehydrogena 38.0 92 0.0032 26.5 7.4 53 69-121 9-64 (319)
407 4dio_A NAD(P) transhydrogenase 38.0 70 0.0024 28.9 6.8 48 71-121 192-239 (405)
408 3fsl_A Aromatic-amino-acid ami 38.0 61 0.0021 28.0 6.4 53 71-123 97-150 (397)
409 2wyu_A Enoyl-[acyl carrier pro 37.9 1.2E+02 0.0042 24.7 8.0 55 69-123 9-67 (261)
410 4fk1_A Putative thioredoxin re 37.9 34 0.0012 28.8 4.5 28 72-99 9-36 (304)
411 4a5l_A Thioredoxin reductase; 37.9 29 0.00099 29.1 4.1 28 72-99 7-34 (314)
412 1hxh_A 3BETA/17BETA-hydroxyste 37.8 1.3E+02 0.0045 24.3 8.2 51 69-122 7-58 (253)
413 2o23_A HADH2 protein; HSD17B10 37.6 1.6E+02 0.0055 23.7 9.7 52 69-122 13-64 (265)
414 2gqw_A Ferredoxin reductase; f 37.6 1.3E+02 0.0043 26.6 8.5 50 71-120 147-206 (408)
415 2x5d_A Probable aminotransfera 37.5 87 0.003 27.3 7.4 52 72-124 102-153 (412)
416 3rq1_A Aminotransferase class 37.4 1.8E+02 0.006 25.3 9.4 52 71-123 104-155 (418)
417 2x9g_A PTR1, pteridine reducta 37.3 1E+02 0.0036 25.5 7.6 54 69-122 24-80 (288)
418 2b4q_A Rhamnolipids biosynthes 37.3 98 0.0033 25.7 7.4 30 70-99 31-60 (276)
419 3slk_A Polyketide synthase ext 37.3 21 0.00073 35.3 3.4 39 61-99 339-377 (795)
420 3h2s_A Putative NADH-flavin re 37.2 79 0.0027 24.8 6.5 49 71-122 3-51 (224)
421 3oj0_A Glutr, glutamyl-tRNA re 37.1 46 0.0016 24.6 4.7 24 71-94 23-46 (144)
422 3op4_A 3-oxoacyl-[acyl-carrier 37.1 1.5E+02 0.0052 23.9 8.4 31 69-99 10-40 (248)
423 4ffl_A PYLC; amino acid, biosy 36.9 44 0.0015 29.1 5.2 30 71-100 3-32 (363)
424 3op4_A 3-oxoacyl-[acyl-carrier 36.9 1.2E+02 0.0043 24.4 7.8 17 248-264 214-230 (248)
425 3doj_A AT3G25530, dehydrogenas 36.8 57 0.0019 27.8 5.8 44 71-117 23-66 (310)
426 1w6u_A 2,4-dienoyl-COA reducta 36.7 1.2E+02 0.0039 25.3 7.8 32 70-101 28-59 (302)
427 3gdg_A Probable NADP-dependent 36.7 92 0.0031 25.4 7.0 16 250-265 235-250 (267)
428 3l6d_A Putative oxidoreductase 36.7 69 0.0024 27.2 6.4 43 72-117 12-54 (306)
429 1uls_A Putative 3-oxoacyl-acyl 36.6 1.7E+02 0.0056 23.6 10.3 53 69-124 6-59 (245)
430 2et6_A (3R)-hydroxyacyl-COA de 36.6 2.4E+02 0.0081 26.6 10.6 54 68-122 322-375 (604)
431 2wsb_A Galactitol dehydrogenas 36.6 1.4E+02 0.0046 24.0 8.0 32 69-100 12-43 (254)
432 3rd5_A Mypaa.01249.C; ssgcid, 36.5 1.8E+02 0.0062 24.0 9.1 51 69-122 17-68 (291)
433 4iin_A 3-ketoacyl-acyl carrier 36.4 1.7E+02 0.006 23.8 9.3 76 105-185 43-118 (271)
434 1yxm_A Pecra, peroxisomal tran 36.3 1.6E+02 0.0054 24.4 8.6 32 69-100 19-50 (303)
435 3m9w_A D-xylose-binding peripl 36.3 1.8E+02 0.0062 24.0 17.2 46 162-209 176-223 (313)
436 2ew2_A 2-dehydropantoate 2-red 36.3 78 0.0027 26.4 6.6 45 72-119 6-50 (316)
437 3ftp_A 3-oxoacyl-[acyl-carrier 36.3 78 0.0027 26.2 6.5 53 69-121 29-82 (270)
438 3tl3_A Short-chain type dehydr 36.2 1.1E+02 0.0036 24.9 7.3 48 70-122 11-58 (257)
439 3v2g_A 3-oxoacyl-[acyl-carrier 36.2 1.8E+02 0.0062 23.9 9.4 87 94-185 32-120 (271)
440 3uhj_A Probable glycerol dehyd 36.1 90 0.0031 27.8 7.2 111 91-210 28-139 (387)
441 3ppi_A 3-hydroxyacyl-COA dehyd 36.1 1.6E+02 0.0053 24.2 8.4 50 70-122 32-82 (281)
442 3pk0_A Short-chain dehydrogena 36.1 1.8E+02 0.006 23.7 9.3 76 105-185 24-99 (262)
443 3jzd_A Iron-containing alcohol 36.1 1.6E+02 0.0054 25.9 8.8 109 93-211 13-123 (358)
444 2bd0_A Sepiapterin reductase; 36.0 1.5E+02 0.0051 23.6 8.1 53 70-122 4-64 (244)
445 2vhw_A Alanine dehydrogenase; 35.9 80 0.0027 27.9 6.8 45 71-118 170-215 (377)
446 3nnk_A Ureidoglycine-glyoxylat 35.9 73 0.0025 27.6 6.6 51 72-123 67-119 (411)
447 2o8n_A APOA-I binding protein; 35.8 51 0.0017 27.9 5.2 32 70-101 81-115 (265)
448 3vtz_A Glucose 1-dehydrogenase 35.7 1.8E+02 0.006 23.9 8.7 32 68-99 14-45 (269)
449 4e12_A Diketoreductase; oxidor 35.7 82 0.0028 26.4 6.6 29 71-99 6-34 (283)
450 2w2k_A D-mandelate dehydrogena 35.7 2.2E+02 0.0075 24.7 11.5 106 70-197 164-272 (348)
451 3ri6_A O-acetylhomoserine sulf 35.7 1E+02 0.0035 27.7 7.6 52 72-124 100-155 (430)
452 3nyt_A Aminotransferase WBPE; 35.6 62 0.0021 27.8 6.0 53 71-123 52-104 (367)
453 3lvm_A Cysteine desulfurase; s 35.5 61 0.0021 28.3 6.0 54 71-124 87-146 (423)
454 1xkq_A Short-chain reductase f 35.5 1.1E+02 0.0037 25.3 7.3 32 69-100 7-38 (280)
455 4h31_A Otcase, ornithine carba 35.4 1.2E+02 0.0042 26.8 7.9 52 71-122 183-242 (358)
456 2cfc_A 2-(R)-hydroxypropyl-COM 35.4 92 0.0031 25.0 6.7 31 70-100 4-34 (250)
457 2dgk_A GAD-beta, GADB, glutama 35.4 72 0.0025 28.5 6.6 52 72-124 106-169 (452)
458 3h5t_A Transcriptional regulat 35.3 2.1E+02 0.0071 24.4 14.8 43 165-210 260-306 (366)
459 2ch1_A 3-hydroxykynurenine tra 35.3 66 0.0023 27.7 6.1 51 71-123 71-124 (396)
460 3tjr_A Short chain dehydrogena 35.2 2E+02 0.0068 24.1 9.8 86 94-185 32-119 (301)
461 1j32_A Aspartate aminotransfer 35.1 45 0.0015 28.8 5.0 52 72-124 93-144 (388)
462 4dmm_A 3-oxoacyl-[acyl-carrier 35.0 1.9E+02 0.0064 23.7 9.4 87 94-185 29-117 (269)
463 4ej6_A Putative zinc-binding d 35.0 78 0.0027 27.7 6.6 84 106-208 197-284 (370)
464 3tpc_A Short chain alcohol deh 34.9 1.8E+02 0.0061 23.5 9.5 33 69-101 8-40 (257)
465 3r1i_A Short-chain type dehydr 34.6 1.3E+02 0.0046 24.8 7.8 86 94-185 33-120 (276)
466 3s2e_A Zinc-containing alcohol 34.6 57 0.002 28.0 5.5 93 95-207 169-262 (340)
467 3ftp_A 3-oxoacyl-[acyl-carrier 34.6 1.7E+02 0.0059 24.0 8.5 85 94-185 29-116 (270)
468 1ebd_A E3BD, dihydrolipoamide 34.5 1.4E+02 0.0047 26.7 8.4 51 70-120 171-230 (455)
469 1v59_A Dihydrolipoamide dehydr 34.5 1.2E+02 0.004 27.4 7.9 50 70-119 184-242 (478)
470 2p91_A Enoyl-[acyl-carrier-pro 34.5 1.2E+02 0.0039 25.2 7.4 70 70-140 23-96 (285)
471 1v9l_A Glutamate dehydrogenase 34.5 72 0.0025 29.0 6.3 51 50-101 191-242 (421)
472 3ju7_A Putative PLP-dependent 34.4 75 0.0026 27.8 6.4 53 71-123 55-107 (377)
473 1gpj_A Glutamyl-tRNA reductase 34.2 82 0.0028 28.1 6.7 14 174-187 227-240 (404)
474 2oln_A NIKD protein; flavoprot 34.1 40 0.0014 29.4 4.5 30 71-100 6-35 (397)
475 2d59_A Hypothetical protein PH 33.8 1.2E+02 0.004 22.7 6.6 48 72-119 81-128 (144)
476 2f1k_A Prephenate dehydrogenas 33.7 1E+02 0.0036 25.3 6.9 43 72-117 3-45 (279)
477 3dme_A Conserved exported prot 33.7 42 0.0014 28.6 4.5 31 71-101 6-36 (369)
478 3i4f_A 3-oxoacyl-[acyl-carrier 33.7 84 0.0029 25.6 6.3 53 70-122 9-63 (264)
479 2dwc_A PH0318, 433AA long hypo 33.7 2.3E+02 0.008 24.9 9.7 31 71-101 21-51 (433)
480 3obb_A Probable 3-hydroxyisobu 33.6 68 0.0023 27.5 5.8 44 72-118 6-49 (300)
481 2vz8_A Fatty acid synthase; tr 33.5 2.8E+02 0.0096 31.3 11.8 57 66-122 1882-1943(2512)
482 2pnf_A 3-oxoacyl-[acyl-carrier 33.3 1.8E+02 0.0062 23.0 8.8 32 69-100 8-39 (248)
483 3klj_A NAD(FAD)-dependent dehy 33.2 39 0.0013 29.9 4.3 50 72-121 149-208 (385)
484 3ndn_A O-succinylhomoserine su 33.1 1.2E+02 0.004 27.0 7.6 77 72-154 99-179 (414)
485 3lxd_A FAD-dependent pyridine 33.0 59 0.002 28.8 5.5 50 71-120 154-213 (415)
486 3isl_A Purine catabolism prote 33.0 2.1E+02 0.0071 24.6 9.1 51 72-123 65-117 (416)
487 3fdb_A Beta C-S lyase, putativ 32.7 70 0.0024 27.3 5.8 52 71-124 83-135 (377)
488 3is3_A 17BETA-hydroxysteroid d 32.6 2E+02 0.0069 23.4 8.8 87 94-185 19-107 (270)
489 1vb5_A Translation initiation 32.6 1.4E+02 0.0048 25.2 7.6 35 70-104 111-145 (276)
490 3brs_A Periplasmic binding pro 32.6 2E+02 0.0067 23.3 9.8 149 53-211 55-227 (289)
491 1rrm_A Lactaldehyde reductase; 32.5 85 0.0029 27.7 6.4 88 93-187 8-100 (386)
492 3kgw_A Alanine-glyoxylate amin 32.5 91 0.0031 26.6 6.6 52 71-123 76-129 (393)
493 1xhl_A Short-chain dehydrogena 32.3 1.3E+02 0.0045 25.2 7.4 31 70-100 28-58 (297)
494 3osu_A 3-oxoacyl-[acyl-carrier 32.2 2E+02 0.0067 23.1 9.3 76 105-185 18-93 (246)
495 1y81_A Conserved hypothetical 32.2 1.2E+02 0.004 22.6 6.3 46 72-117 73-118 (138)
496 3n74_A 3-ketoacyl-(acyl-carrie 32.1 2E+02 0.0068 23.2 8.4 83 94-185 10-94 (261)
497 1ps9_A 2,4-dienoyl-COA reducta 32.1 1.9E+02 0.0064 27.5 9.2 32 70-101 374-405 (671)
498 3ryc_A Tubulin alpha chain; al 32.1 92 0.0031 28.6 6.6 63 145-207 92-169 (451)
499 3p19_A BFPVVD8, putative blue 32.0 2.1E+02 0.0071 23.4 8.5 67 69-139 17-83 (266)
500 3a2b_A Serine palmitoyltransfe 32.0 2.2E+02 0.0074 24.4 9.0 52 71-123 105-156 (398)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=1.9e-62 Score=448.15 Aligned_cols=262 Identities=52% Similarity=0.929 Sum_probs=246.3
Q ss_pred hhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHH
Q 023565 6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (280)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA 85 (280)
.++++|.+++|+|||+++++|++.+|++||+|+|++|||||||+|++.+++.+|.++|.+.+|.++||++|+||||+|+|
T Consensus 24 ~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA 103 (344)
T 3vc3_A 24 NIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMA 103 (344)
T ss_dssp SCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHH
T ss_pred hhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred HHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 023565 86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP 165 (280)
Q Consensus 86 ~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (280)
++|+.+|++|+||||+++++.|+.+++.|||+|+.++...++..+...+.+++.+.++.++++||+||.++.+||.|+++
T Consensus 104 ~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~ 183 (344)
T 3vc3_A 104 FMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGP 183 (344)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHH
T ss_pred HHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999986555566667777777777789999999999998889999999
Q ss_pred HHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCCeE
Q 023565 166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILDEV 245 (280)
Q Consensus 166 Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~ 245 (280)
||++|+++.||+||+|+|+||+++|++.++|+.+|+++||+|||.+++.+..+++.++.+++++.+..+...+.+.+|++
T Consensus 184 EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~~ 263 (344)
T 3vc3_A 184 EIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKV 263 (344)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEE
T ss_pred HHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCCCCeeEecccccccCcccchhhceEE
Confidence 99999988999999999999999999999999999999999999999999988888888999998888888888999999
Q ss_pred EEeCHHHHHHHHHHhhhcCCcc
Q 023565 246 ITVSHKIDLHLLHFCCCSSPTL 267 (280)
Q Consensus 246 ~~V~d~ea~~~~~~la~~eG~~ 267 (280)
+.|+|+|+++++++|++.||++
T Consensus 264 v~v~d~eai~a~~~L~~~eGi~ 285 (344)
T 3vc3_A 264 LEVSSEDAVNMARVLALKEGLM 285 (344)
T ss_dssp EEECHHHHHHHHHHHHHHHCCC
T ss_pred EEECHHHHHHHHHHHHHHCCCE
Confidence 9999999999999999999987
No 2
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.7e-61 Score=449.52 Aligned_cols=272 Identities=59% Similarity=0.998 Sum_probs=254.5
Q ss_pred cchhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHH
Q 023565 4 NNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG 83 (280)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~a 83 (280)
.+++++++.+.+++|||++++++++..|.+||+|+|++|||||||||++.+++.++.++|.+.+|.++||++|+||||+|
T Consensus 110 ~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~A 189 (430)
T 4aec_A 110 GLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIG 189 (430)
T ss_dssp SCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHH
T ss_pred ccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHH
Confidence 35677899999999999999999998899999999999999999999999999999999999998778999999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 023565 84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETT 163 (280)
Q Consensus 84 lA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~ 163 (280)
+|++|+.+|++|+||||++++..|+..++.|||+|+.++...+++++.+.+++++++.++.+|++||+||.++.+||.|+
T Consensus 190 lA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~ 269 (430)
T 4aec_A 190 LAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETT 269 (430)
T ss_dssp HHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTH
T ss_pred HHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999865568899999999998877899999999999977899999
Q ss_pred HHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCC
Q 023565 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILD 243 (280)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd 243 (280)
++||++|++++||+||+|+|+||+++|++.++|+.+|+++||||||++++.+..+++.++.++||+.+..|+.++.+++|
T Consensus 270 a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~vd 349 (430)
T 4aec_A 270 GPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMD 349 (430)
T ss_dssp HHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTCS
T ss_pred HHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHHHHHhCC
Confidence 99999999778999999999999999999999999999999999999999888888888889999998889989899999
Q ss_pred eEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 244 EVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 244 ~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
+++.|+|+|+++++++|++.||++ .+++++++
T Consensus 350 ~~v~Vsd~ea~~a~r~La~~eGi~vepssGaa~aAal~l 388 (430)
T 4aec_A 350 EVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKV 388 (430)
T ss_dssp EEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred eEEEECHHHHHHHHHHHHHHCCCEEehHHHHHHHHHHHH
Confidence 999999999999999999998887 45666665
No 3
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=6.4e-61 Score=436.55 Aligned_cols=272 Identities=40% Similarity=0.709 Sum_probs=251.3
Q ss_pred ccchhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHH
Q 023565 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (280)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~ 82 (280)
+...+++++...+++|||++++++ +..|.+||+|+|++|||||||+|++.+++.++.++|.+++|.+.||++|+||||+
T Consensus 7 ~i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~ 85 (334)
T 3tbh_A 7 KSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGV 85 (334)
T ss_dssp TTTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred hHHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHH
Confidence 345677899999999999999999 7788999999999999999999999999999999998888866359999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 023565 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (280)
Q Consensus 83 alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t 162 (280)
|+|++|+.+|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.|+..||.|
T Consensus 86 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t 165 (334)
T 3tbh_A 86 SLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEET 165 (334)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHH
Confidence 99999999999999999999999999999999999999986556889999999999887789999999999988789999
Q ss_pred HHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccC
Q 023565 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDIL 242 (280)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~v 242 (280)
+++||++|+++.||+||+|+|+||+++|++.++|+.+|++|||||||.+++++..+++.++.+++++.+..|+.+.++++
T Consensus 166 ~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~ 245 (334)
T 3tbh_A 166 TGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLI 245 (334)
T ss_dssp HHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCCCCCCSCTTSCCSSCCTTCCGGGC
T ss_pred HHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCCcCCeecCCCCCCcCCHHHHHHhC
Confidence 99999999977899999999999999999999999999999999999999988888887888899998888999989999
Q ss_pred CeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 243 DEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 243 d~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
|+++.|+|+|+++++++|++.+|++ ++++++++
T Consensus 246 d~~~~V~d~e~~~a~~~l~~~egi~~epssgaa~aa~~~~ 285 (334)
T 3tbh_A 246 DEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKI 285 (334)
T ss_dssp SEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred CEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHH
Confidence 9999999999999999999988877 56666665
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=3.1e-60 Score=430.17 Aligned_cols=270 Identities=63% Similarity=1.055 Sum_probs=248.7
Q ss_pred hhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHH
Q 023565 6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (280)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA 85 (280)
.+++++...+++|||++++++++..+.+||+|+|++|||||||||++.+++.++.++|.++||..+||++|+||||+|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA 83 (322)
T 1z7w_A 4 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLA 83 (322)
T ss_dssp CCCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred hhhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHH
Confidence 35789999999999999999998888999999999999999999999999999999999888866799999999999999
Q ss_pred HHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 023565 86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP 165 (280)
Q Consensus 86 ~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (280)
++|+.+|++|+||||+++++.|+++++.|||+|+.++...+++++.+.+++++++.++.+|++||+||.|+..||.|+++
T Consensus 84 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~ 163 (322)
T 1z7w_A 84 FTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGP 163 (322)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred HHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986545788999999999888789999999999998779999999
Q ss_pred HHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCCeE
Q 023565 166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILDEV 245 (280)
Q Consensus 166 Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~ 245 (280)
||++|++++||+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+..+++.++.+++++.+..|+.+.++++|++
T Consensus 164 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~ 243 (322)
T 1z7w_A 164 EIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEV 243 (322)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEE
T ss_pred HHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCCCCCCcccCcCcCCCCChhhhHHhCCEE
Confidence 99999976899999999999999999999999999999999999999888777776677899998878888888999999
Q ss_pred EEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 246 ITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 246 ~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
+.|+|+|+++++++|++.+|++ .+++++++
T Consensus 244 ~~V~d~e~~~a~~~l~~~~gi~~~pssga~~aaa~~~ 280 (322)
T 1z7w_A 244 VQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKL 280 (322)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHcCceEchhHHHHHHHHHHH
Confidence 9999999999999999988876 45555554
No 5
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=4.6e-59 Score=422.91 Aligned_cols=263 Identities=33% Similarity=0.535 Sum_probs=240.8
Q ss_pred chhHHhhhcccCCCcceeccccccC-------CCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCC
Q 023565 5 NAIKRDVTELIGNTPMVYLNNVVDG-------CVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTS 77 (280)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~-------~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~Ss 77 (280)
+.+++++.+.+++|||++++++++. .+.+||+|+|++|||||||+|++.+++.++.++|.+.++.+ ||++|+
T Consensus 3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~~-vv~aSs 81 (325)
T 3dwg_A 3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGAT-ILEPTS 81 (325)
T ss_dssp CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTCE-EEEECS
T ss_pred cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEeCC
Confidence 3467899999999999999999987 78899999999999999999999999999999998888754 999999
Q ss_pred ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHH
Q 023565 78 GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPK 157 (280)
Q Consensus 78 GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 157 (280)
||||+|+|++|+.+|++|+||||+++++.|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.++.
T Consensus 82 GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~ 161 (325)
T 3dwg_A 82 GNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTD 161 (325)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHH
T ss_pred cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999976678999999999999886689999999999987
Q ss_pred HHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCcccc
Q 023565 158 IHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVL 237 (280)
Q Consensus 158 ~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~ 237 (280)
.||.|+++||++|++ .||+||+|+|+||+++|++.++|+.+|+++||+|||++++.+ +.+++++.+..|+.+
T Consensus 162 ~g~~t~~~Ei~~q~~-~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~-------~~~~~i~~~~~~~~~ 233 (325)
T 3dwg_A 162 SHYCGTGPELLADLP-EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGV-------YALRNMDEGFVPELY 233 (325)
T ss_dssp HHHHTHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGG-------GCCSSGGGCCCCTTC
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcch-------hccCcccCCcCcccc
Confidence 799999999999995 499999999999999999999999999999999999999766 234577777788888
Q ss_pred ccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 238 DIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 238 ~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
.++++|+++.|+|+|+++++++|++.+|++ ++++++++.
T Consensus 234 ~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssa~a~aa~~~~~ 279 (325)
T 3dwg_A 234 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVG 279 (325)
T ss_dssp CGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHH
T ss_pred cHhhCCeEEEECHHHHHHHHHHHHHHcCceechhHHHHHHHHHHHH
Confidence 889999999999999999999999988876 567777653
No 6
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=1.3e-58 Score=417.94 Aligned_cols=269 Identities=48% Similarity=0.780 Sum_probs=245.7
Q ss_pred hhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHH
Q 023565 6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (280)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA 85 (280)
.+++++...+++|||++++++++..+.+||+|+|++|||||||||++.+++.++.++|.+.+|. +||++|+||||+|+|
T Consensus 5 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~-~vv~assGN~g~alA 83 (313)
T 2q3b_A 5 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDT-IILEPTSGNTGIALA 83 (313)
T ss_dssp CCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTC-EEEEECSSHHHHHHH
T ss_pred chhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHHHHHH
Confidence 4578899999999999999999888899999999999999999999999999999999877764 499999999999999
Q ss_pred HHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 023565 86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP 165 (280)
Q Consensus 86 ~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (280)
++|+.+|++|+||||+++++.|+++++.+||+|+.++...+++++.+.+++++++.+..++++||+||.++..||.|+++
T Consensus 84 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~ 163 (313)
T 2q3b_A 84 MVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAE 163 (313)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999996546889999999999887555889999999998778999999
Q ss_pred HHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCCeE
Q 023565 166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILDEV 245 (280)
Q Consensus 166 Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~ 245 (280)
||++|++++||+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+..+.+..+.+++++.+..|+.+....+|++
T Consensus 164 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~d~~ 243 (313)
T 2q3b_A 164 EVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEI 243 (313)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEE
T ss_pred HHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCCCCCCcccCCcCCCCCChhhhHhhccEE
Confidence 99999976799999999999999999999999999999999999999877655556778899998878888888899999
Q ss_pred EEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 246 ITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 246 ~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
+.|+|+|+++++++|++.+|++ ++++++++
T Consensus 244 ~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~ 280 (313)
T 2q3b_A 244 ITVGNEDALNVARRLAREEGLLVGISSGAATVAALQV 280 (313)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHcCceEchHHHHHHHHHHHH
Confidence 9999999999999999988876 56777665
No 7
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=1.2e-58 Score=418.69 Aligned_cols=267 Identities=43% Similarity=0.691 Sum_probs=240.6
Q ss_pred hHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHH
Q 023565 7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF 86 (280)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~ 86 (280)
+++++...+++|||++++++ + .|.+||+|+|++|||||||||++.+++.++.++|.++++ .+||++||||||+|+|+
T Consensus 3 ~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A~ 79 (316)
T 1y7l_A 3 IYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALAY 79 (316)
T ss_dssp CCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHHH
T ss_pred chhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHH
Confidence 46889999999999999999 6 789999999999999999999999999999999987776 45999999999999999
Q ss_pred HHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCCccHHHHHHhHHH
Q 023565 87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKIHYETTGP 165 (280)
Q Consensus 87 ~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~ 165 (280)
+|+.+|++|+||||+++++.|+++++.+||+|+.++...+++++.+.+++++++.++. ++++||+||.++..||.|+++
T Consensus 80 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~ 159 (316)
T 1y7l_A 80 VAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGP 159 (316)
T ss_dssp HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986445889999999999887666 889999999998778999999
Q ss_pred HHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEeCCCCccccC---CC---CCCcccCcccCCCCccccc
Q 023565 166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVYGVEPSESAVLNG---GQ---RGKHLIQGIGAGIIPSVLD 238 (280)
Q Consensus 166 Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~-p~~~vigVe~~~~~~~~~---g~---~~~~~~~glg~~~~~~~~~ 238 (280)
||++|++++||+||+|+|+||+++|++.++|+++ |++|||+|||++++.+.. |. ..++.+++++.+..|+.+.
T Consensus 160 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~~~ 239 (316)
T 1y7l_A 160 EIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLD 239 (316)
T ss_dssp HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTTCC
T ss_pred HHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCccccccccCCccCCCCcccCcCCCCCCCchhh
Confidence 9999996669999999999999999999999998 999999999999976532 22 2456788998887788888
Q ss_pred cccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 239 IDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 239 ~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
++++|+++.|+|+|+++++++|++.+|++ ++++++++.
T Consensus 240 ~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~~laa~~~~~ 284 (316)
T 1y7l_A 240 LSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLA 284 (316)
T ss_dssp GGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHH
T ss_pred HhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHHHHHHHHHHHHHH
Confidence 88999999999999999999999988876 577777653
No 8
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=3.1e-58 Score=413.95 Aligned_cols=265 Identities=45% Similarity=0.738 Sum_probs=241.1
Q ss_pred hhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCC-eEEEEeCCChHHHHHHHHH
Q 023565 10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK-TTLIEVTSGNTGVGLAFIA 88 (280)
Q Consensus 10 ~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~-~~vv~~SsGN~g~alA~~a 88 (280)
++...+++|||++++++++..|.+||+|+|++|||||||||++.+++.++.++|.+++|. .+||++|+||||+|+|++|
T Consensus 2 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a 81 (304)
T 1ve1_A 2 RVEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIA 81 (304)
T ss_dssp CGGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHH
T ss_pred ChHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHH
Confidence 367789999999999999888899999999999999999999999999999999877764 1599999999999999999
Q ss_pred HHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 023565 89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168 (280)
Q Consensus 89 ~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~ 168 (280)
+.+|++|+||||+++++.|+++++.+||+|+.++...+++++.+.+++++++ ++.+|++||+||.++..||.|+++||+
T Consensus 82 ~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~ 160 (304)
T 1ve1_A 82 ASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELY 160 (304)
T ss_dssp HHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999754588999999999887 478899999999998655899999999
Q ss_pred HhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCCeEEEe
Q 023565 169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILDEVITV 248 (280)
Q Consensus 169 ~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~~~V 248 (280)
+|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+..+.+.++.+++++.+..|+.+.++++|+++.|
T Consensus 161 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V 240 (304)
T 1ve1_A 161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQV 240 (304)
T ss_dssp HHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEE
T ss_pred HHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCcccCCCCCCCCChhhhhhhCCEEEEE
Confidence 99966799999999999999999999999999999999999999887766666677899998878888888899999999
Q ss_pred CHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 249 SHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 249 ~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
+|+|+++++++|++.+|++ ++++++++
T Consensus 241 ~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~ 274 (304)
T 1ve1_A 241 WEEDAFPLARRLAREEGLFLGMSSGGIVWAALQV 274 (304)
T ss_dssp CHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCcEEcHHHHHHHHHHHHH
Confidence 9999999999999988886 56777665
No 9
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=6.9e-58 Score=411.52 Aligned_cols=258 Identities=38% Similarity=0.648 Sum_probs=235.6
Q ss_pred HhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHH
Q 023565 9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88 (280)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a 88 (280)
+++...+++|||++++++++..|.+||+|+|++|||||||||++.+++.++.++|.+++|. +||++||||||+|+|++|
T Consensus 2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g~-~vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIA 80 (303)
T ss_dssp CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTC-EEEEECSSHHHHHHHHHH
T ss_pred cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC-EEEEECCcHHHHHHHHHH
Confidence 4788999999999999999888999999999999999999999999999999999877764 599999999999999999
Q ss_pred HHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 023565 89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168 (280)
Q Consensus 89 ~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~ 168 (280)
+.+|++|+||||+++++.|+++++.+||+|+.++...+++++.+.+++++++.+++ |++||+||.++..||.|+++||+
T Consensus 81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~ 159 (303)
T 2v03_A 81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW 159 (303)
T ss_dssp HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence 99999999999999999999999999999999997557899999999998885577 99999999998779999999999
Q ss_pred HhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCCeEEEe
Q 023565 169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILDEVITV 248 (280)
Q Consensus 169 ~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~~~V 248 (280)
+|++.+||+||+|+|+||+++|++.++|+.+|++|||+|||++++++.. +++++.+..|+.+.++++|+++.|
T Consensus 160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~-------~~gl~~~~~~~~~~~~~~d~~~~V 232 (303)
T 2v03_A 160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG-------IRRWPTEYLPGIFNASLVDEVLDI 232 (303)
T ss_dssp HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTT-------CCCCCGGGCCTTCCGGGCSEEEEE
T ss_pred HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCccccc-------CCcCCCCCCCcccchHHCCEEEEE
Confidence 9996669999999999999999999999999999999999999987653 567777777888888899999999
Q ss_pred CHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 249 SHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 249 ~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
+|+|+++++++|++.+|++ ++++++++
T Consensus 233 ~d~e~~~a~~~l~~~~gi~~~pssa~alaa~~~~ 266 (303)
T 2v03_A 233 HQRDAENTMRELAVREGIFCGVSSGGAVAGALRV 266 (303)
T ss_dssp CHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHH
Confidence 9999999999999987766 67777665
No 10
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=2.7e-58 Score=420.72 Aligned_cols=268 Identities=38% Similarity=0.637 Sum_probs=245.1
Q ss_pred hhHHhhhcccCCCcceecccccc----CCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHH
Q 023565 6 AIKRDVTELIGNTPMVYLNNVVD----GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTG 81 (280)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~----~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g 81 (280)
.+++++...+++|||+++++|++ ..|.+||+|+|++|||||||||++.+++.++.++|.+++|. +||++||||||
T Consensus 12 ~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g~-~vv~aSsGN~g 90 (343)
T 2pqm_A 12 RIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGM-EIIESTSGNTG 90 (343)
T ss_dssp CEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTTC-EEEEECSSHHH
T ss_pred hHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCC-EEEEECCcHHH
Confidence 35688999999999999999988 77899999999999999999999999999999999877764 59999999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCCccHHHHH
Q 023565 82 VGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKIHY 160 (280)
Q Consensus 82 ~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~ 160 (280)
+|+|++|+.+|++|+||||+++++.|+++++.+||+|+.++...+++++.+.+++++++.++. ++++||+||.|+.+||
T Consensus 91 ~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~ 170 (343)
T 2pqm_A 91 IALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHH 170 (343)
T ss_dssp HHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHH
Confidence 999999999999999999999999999999999999999986545788999999999887655 7789999999987899
Q ss_pred HhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccc
Q 023565 161 ETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDID 240 (280)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~ 240 (280)
.|++ ||++|++++||+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+..++..++.+++++.+..|+.+.++
T Consensus 171 ~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~ 249 (343)
T 2pqm_A 171 YTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKE 249 (343)
T ss_dssp HHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTCCCCCCCCTTCCCSSCCTTCCGG
T ss_pred HHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccCCCCCeecCccCCCCCCHHHHHH
Confidence 9999 999999767999999999999999999999999999999999999998877666667788999988788888889
Q ss_pred cCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 241 ILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 241 ~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
++|+++.|+|+|+++++++|++.+|++ ++++++++
T Consensus 250 ~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epssa~alaa~~~~ 291 (343)
T 2pqm_A 250 FVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKE 291 (343)
T ss_dssp GCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred hCCeEEEECHHHHHHHHHHHHHHhCCeEchhHHHHHHHHHHH
Confidence 999999999999999999999988876 56777665
No 11
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.4e-58 Score=416.79 Aligned_cols=267 Identities=48% Similarity=0.774 Sum_probs=212.8
Q ss_pred hHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHH
Q 023565 7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF 86 (280)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~ 86 (280)
+++++...+++|||++++++++..|.+||+|+|++|||||||||++.+++.++.++|.+.+|. +||++|+||||+|+|+
T Consensus 4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~-~vv~assGN~g~a~A~ 82 (308)
T 2egu_A 4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPGD-TIVEPTSGNTGIGLAM 82 (308)
T ss_dssp CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTC-EEEEECCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHHHHHHH
Confidence 468899999999999999999888999999999999999999999999999999999877764 5999999999999999
Q ss_pred HHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHH
Q 023565 87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE 166 (280)
Q Consensus 87 ~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E 166 (280)
+|+.+|++|+||||+++++.|+++++.+||+|+.++...+++++.+.+++++++.+ .++++||+||.++.+||.|+++|
T Consensus 83 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~~-~~~~~~~~n~~~~~~g~~t~~~E 161 (308)
T 2egu_A 83 VAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREHG-YFMPQQFKNEANPEIHRLTTGKE 161 (308)
T ss_dssp HHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHC-CBCC--------------CHHHH
T ss_pred HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHCc-CCcCCcCCChhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999865457889999999988874 48889999999886799999999
Q ss_pred HHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCCeEE
Q 023565 167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILDEVI 246 (280)
Q Consensus 167 i~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~~ 246 (280)
|++|++++||+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+..+.+..+.+++++.+..|+.+.++++|+++
T Consensus 162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 241 (308)
T 2egu_A 162 IVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPDILDTSIYDGVI 241 (308)
T ss_dssp HHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-----------------------CCCCCCSCSEEE
T ss_pred HHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCCCCCCcccCccCCCCCCHhHHHHhcCeEE
Confidence 99999767999999999999999999999999999999999999998777666666778888887778878888999999
Q ss_pred EeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 247 TVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 247 ~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
.|+|+|+++++++|++.+|++ ++++++++
T Consensus 242 ~v~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~ 277 (308)
T 2egu_A 242 TVTTEEAFAAARRAAREEGILGGISSGAAIHAALKV 277 (308)
T ss_dssp EECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHHhCceEcHHHHHHHHHHHHH
Confidence 999999999999999988876 56777665
No 12
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=6e-57 Score=405.41 Aligned_cols=259 Identities=45% Similarity=0.706 Sum_probs=235.5
Q ss_pred HhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHH
Q 023565 9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88 (280)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a 88 (280)
..+...+++|||+++++++ .+||+|+|++|||||||||++.+++.++.++|.+.++ ||++|+||||+|+|++|
T Consensus 12 ~~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~---vv~aSsGN~g~a~A~aa 84 (303)
T 1o58_A 12 HMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIG 84 (303)
T ss_dssp CHHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTC---EEEECSSHHHHHHHHHH
T ss_pred hhhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCC---EEEECchHHHHHHHHHH
Confidence 3467889999999999876 5899999999999999999999999999988875554 99999999999999999
Q ss_pred HHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 023565 89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168 (280)
Q Consensus 89 ~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~ 168 (280)
+.+|++|+||||+++++.|+++++.+||+|+.++++.+++++.+.+++++++. +.+|++||+||.++..||.|+++||+
T Consensus 85 ~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~ 163 (303)
T 1o58_A 85 AKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEIL 163 (303)
T ss_dssp HHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986445889999999998887 67889999999998779999999999
Q ss_pred HhhCCCCCEEEEecCCchhHHHHHHHHHhcCCC-cEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCCeEEE
Q 023565 169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPD-IKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILDEVIT 247 (280)
Q Consensus 169 ~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~-~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd~~~~ 247 (280)
+|+++.||+||+|+|+||+++|++.++|+.+|+ +|||+|||++++.+..+++.++.+++++.+..|+.+.++++|+++.
T Consensus 164 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~ 243 (303)
T 1o58_A 164 KQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVIT 243 (303)
T ss_dssp HHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEE
T ss_pred HHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCCCCCCeecCcCCCCCcCHHHHHHhCCeEEE
Confidence 999666999999999999999999999999999 9999999999988877777777889998887788888889999999
Q ss_pred eCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 248 VSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 248 V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
|+|+|+++++++|++.+|++ ++++++++
T Consensus 244 V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~ 278 (303)
T 1o58_A 244 VEDEEAYEMARYLAKKEGLLVGISSGANVAAALKV 278 (303)
T ss_dssp ECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHH
Confidence 99999999999999988876 56776665
No 13
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=1.1e-55 Score=413.32 Aligned_cols=270 Identities=38% Similarity=0.600 Sum_probs=236.4
Q ss_pred hhHHhhhcccCCCcceeccccccCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHH
Q 023565 6 AIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG 83 (280)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g--~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~a 83 (280)
.+++++...+++|||+++++|++.+| ++||+|+|++|||||||||++.+++.++.++|.++++.+ ||++|+||||+|
T Consensus 97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~t-VV~aSsGN~G~A 175 (435)
T 1jbq_A 97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDT-IIEPTSGNTGIG 175 (435)
T ss_dssp SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTCE-EEEECSSHHHHH
T ss_pred hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHH
Confidence 35678899999999999999988776 699999999999999999999999999999998888754 999999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHH---HHHHHHHHHHhCCCeEEcCCCCCCccHHHHH
Q 023565 84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE---ILEKGEEILKKTPDGYLLRQFENPANPKIHY 160 (280)
Q Consensus 84 lA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (280)
+|++|+.+|++|+||||++++..|+++++.|||+|+.++...++++ ..+.+++++++.++.+|++||+|+.|+.+||
T Consensus 176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~ 255 (435)
T 1jbq_A 176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY 255 (435)
T ss_dssp HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence 9999999999999999999999999999999999999986434544 4677888888876788899999999887899
Q ss_pred HhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc-----CCCCCCcccCcccCCCCcc
Q 023565 161 ETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN-----GGQRGKHLIQGIGAGIIPS 235 (280)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~-----~g~~~~~~~~glg~~~~~~ 235 (280)
.|+++||++|+++++|+||+|+|+||+++|++.++|+.+|++|||||||.+++.+. .+....+.+++++.+.+|.
T Consensus 256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~ 335 (435)
T 1jbq_A 256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPT 335 (435)
T ss_dssp HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCT
T ss_pred HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhhchhhhhcCCCcceeecccccCccch
Confidence 99999999999767999999999999999999999999999999999999986432 2233456788888887777
Q ss_pred ccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 236 VLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 236 ~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
.++..++|+++.|+|+|+++++++|++.||++ .+++++++.
T Consensus 336 ~l~~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~ssgaalaaa~~~~ 383 (435)
T 1jbq_A 336 VLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAA 383 (435)
T ss_dssp TCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHG
T ss_pred hhhhhhccceEEeCHHHHHHHHHHHHHHcCCEEcHHHHHHHHHHHHHH
Confidence 77788999999999999999999999999887 467776653
No 14
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=1.2e-55 Score=424.41 Aligned_cols=271 Identities=35% Similarity=0.561 Sum_probs=244.3
Q ss_pred chhHHhhhcccCCCcceeccccccCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHH
Q 023565 5 NAIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (280)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~g--~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~ 82 (280)
..+++++...+++|||++++++++.+| ++||+|+|++|||||||+|++.+++.++.++|.+.||.+ ||++|+||||+
T Consensus 48 ~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~~-vv~~ssGN~g~ 126 (527)
T 3pc3_A 48 QQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGI 126 (527)
T ss_dssp CSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTCE-EEEECSSHHHH
T ss_pred hhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHH
Confidence 356788999999999999999988776 799999999999999999999999999999999888755 99999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEEcCCCCCCccHHHH
Q 023565 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYLLRQFENPANPKIH 159 (280)
Q Consensus 83 alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g 159 (280)
|+|++|+.+|++|+||||++++..|+.+++.|||+|+.++...+++ .+.+.+++++++.++.+|++||+||.|+.+|
T Consensus 127 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g 206 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAH 206 (527)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHH
T ss_pred HHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHH
Confidence 9999999999999999999999999999999999999998643444 3677888998888778889999999888889
Q ss_pred HHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc-----CCCCCCcccCcccCCCCc
Q 023565 160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN-----GGQRGKHLIQGIGAGIIP 234 (280)
Q Consensus 160 ~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~-----~g~~~~~~~~glg~~~~~ 234 (280)
|.|+++||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||||++++.+. .+.+..+.++|++.+..|
T Consensus 207 ~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~p 286 (527)
T 3pc3_A 207 YDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPP 286 (527)
T ss_dssp HHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCSSSGGGGCCSCCCCSCCSCCCSSCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccccchhhcCCCCCceeccccCCCCCC
Confidence 999999999999768999999999999999999999999999999999999997542 233456678999998888
Q ss_pred cccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 235 SVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 235 ~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
++++++++|+++.|+|+|+++++++|++.||++ ++++++++.
T Consensus 287 ~~~~~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~pssa~alaaal~~~ 335 (527)
T 3pc3_A 287 TVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHA 335 (527)
T ss_dssp TTCCGGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHHHHHHHHHHHHHH
T ss_pred cccchhhCcEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHH
Confidence 888899999999999999999999999998886 677777764
No 15
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=2.8e-56 Score=407.79 Aligned_cols=265 Identities=20% Similarity=0.279 Sum_probs=229.3
Q ss_pred cchhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHH
Q 023565 4 NNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG 83 (280)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~a 83 (280)
...+++++...+++|||+++++|++..|.+||+|+|++|||||||+|++.+++.++.++|.+.+. .+||++|+||||+|
T Consensus 12 i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~-~~vv~~SsGNhg~a 90 (346)
T 3l6b_A 12 VEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKP-KAVVTHSSGNHGQA 90 (346)
T ss_dssp HHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CCC-SCEEEECSSHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccCC-CEEEEeCCCHHHHH
Confidence 45678999999999999999999988889999999999999999999999999999887644333 45999999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 023565 84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETT 163 (280)
Q Consensus 84 lA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~ 163 (280)
+|++|+.+|++|+||||+++++.|+++++.|||+|+.+++ +++++.+.+++++++. +.+|++||+||.++ +||.|+
T Consensus 91 ~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~i~~~~np~~~-~g~~t~ 166 (346)
T 3l6b_A 91 LTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEP--SDESRENVAKRVTEET-EGIMVHPNQEPAVI-AGQGTI 166 (346)
T ss_dssp HHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECS--SHHHHHHHHHHHHHHH-TCEECCSSSCHHHH-HHHHHH
T ss_pred HHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEECCCCChHHH-HHHHHH
Confidence 9999999999999999999999999999999999999984 5789999999998887 68999999999887 799999
Q ss_pred HHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc----CCCC------CCcccCcccCC--
Q 023565 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN----GGQR------GKHLIQGIGAG-- 231 (280)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~----~g~~------~~~~~~glg~~-- 231 (280)
++||++|+ +.+|+||+|+|+||+++|++.++|+.+|+++||+|||.+++++. .|.+ ..+++++++.+
T Consensus 167 ~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~g 245 (346)
T 3l6b_A 167 ALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIG 245 (346)
T ss_dssp HHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCC
T ss_pred HHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHHHHHHHcCCccccCCCCCchhhhccCCCc
Confidence 99999999 58999999999999999999999999999999999999987532 2332 24566777632
Q ss_pred CCccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHh
Q 023565 232 IIPSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKIT 274 (280)
Q Consensus 232 ~~~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~ 274 (280)
...+.+.++++|+++.|+|+|+++++++|++.+|++ +++++++
T Consensus 246 ~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~ 295 (346)
T 3l6b_A 246 LNTWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLS 295 (346)
T ss_dssp TTHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCeEEEECHHHHHHHHHHHHHHCCcEEcHHHHHHHHHHHH
Confidence 223445678899999999999999999999988876 6777754
No 16
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=3.2e-56 Score=406.98 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=231.5
Q ss_pred cchhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHH
Q 023565 4 NNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG 83 (280)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~a 83 (280)
...+++++...+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.+++. ..+||++|+||||+|
T Consensus 27 i~~a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~~----~~~vv~~ssGN~g~a 102 (342)
T 2gn0_A 27 ILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEK----RKGVVACSAGNHAQG 102 (342)
T ss_dssp HHHHHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCHHHH----HTCEEEECSSHHHHH
T ss_pred HHHHHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHHhcC----CCEEEEECCChHHHH
Confidence 3467889999999999999999988888999999999999999999999999998753221 235999999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 023565 84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETT 163 (280)
Q Consensus 84 lA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~ 163 (280)
+|++|+.+|++|+||||+++++.|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++||+||.++ .||.|+
T Consensus 103 lA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~-~g~~t~ 178 (342)
T 2gn0_A 103 VSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGD--NFNDTIAKVSEIVETE-GRIFIPPYDDPKVI-AGQGTI 178 (342)
T ss_dssp HHHHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEEEECCS--SHHHHHHHHHHHHHHH-CCEECCSSSSHHHH-HHHHHH
T ss_pred HHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCHHHH-HHHHHH
Confidence 9999999999999999999999999999999999999985 5889999999998876 78999999999887 799999
Q ss_pred HHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCCCC-
Q 023565 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAGII- 233 (280)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~~~- 233 (280)
++||++|++ .+|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+. .|++ .+++++||+.+..
T Consensus 179 ~~Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~s~~~g~~~~~~~~~t~a~gl~~~~~~ 257 (342)
T 2gn0_A 179 GLEIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPG 257 (342)
T ss_dssp HHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCC
T ss_pred HHHHHHHcC-CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHHHHHHcCCccccCCCCccccccCCCCcc
Confidence 999999994 7999999999999999999999999999999999999987653 3332 3577888887532
Q ss_pred --ccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 234 --PSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 234 --~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
++.+.++++|+++.|+|+|+++++++|++.+|++ ++++++++
T Consensus 258 ~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~ 308 (342)
T 2gn0_A 258 NLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSG 308 (342)
T ss_dssp HHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHT
T ss_pred HHHHHHHHHcCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHh
Confidence 4556788999999999999999999998877765 67777664
No 17
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=3.2e-55 Score=395.40 Aligned_cols=263 Identities=23% Similarity=0.273 Sum_probs=228.4
Q ss_pred ccchhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHH
Q 023565 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (280)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~ 82 (280)
+...+++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++. + ..+||++|+||||+
T Consensus 6 ~i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~-----~~~vv~~ssGN~g~ 78 (311)
T 1ve5_A 6 DLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N-----PKGLLAVSSGNHAQ 78 (311)
T ss_dssp HHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S-----CCCEEEECSSHHHH
T ss_pred HHHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C-----CCeEEEECCCcHHH
Confidence 3456889999999999999999998888899999999999999999999999999876 2 24599999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 023565 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (280)
Q Consensus 83 alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t 162 (280)
|+|++|+.+|++|+||||+++++.|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++||+||.++ .||.|
T Consensus 79 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~-~g~~t 154 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGV--TAKNREEVARALQEET-GYALIHPFDDPLVI-AGQGT 154 (311)
T ss_dssp HHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTC--CTTTHHHHHHHHHHHH-CCEECCSSSSHHHH-HHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCCCCCcchh-hhccH
Confidence 99999999999999999999999999999999999999985 4778888899988876 78999999999988 69999
Q ss_pred HHHHHHHhhC---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc----CCCC------CCcccCccc
Q 023565 163 TGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN----GGQR------GKHLIQGIG 229 (280)
Q Consensus 163 ~~~Ei~~q~~---~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~----~g~~------~~~~~~glg 229 (280)
+++||++|++ +++|+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+. .|.+ ..+++++++
T Consensus 155 ~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~~~i~~gl~ 234 (311)
T 1ve5_A 155 AGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVR 234 (311)
T ss_dssp HHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGC
T ss_pred HHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHHHHHHHcCCccccCCCCCeeeCcCC
Confidence 9999999995 67999999999999999999999999999999999999987542 2332 346677777
Q ss_pred CCC---CccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 230 AGI---IPSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 230 ~~~---~~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
.+. .++.+.++++|+++.|+|+|+++++++|++.+|++ ++++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~ 291 (311)
T 1ve5_A 235 TLSLGERTFPILRERVDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHG 291 (311)
T ss_dssp CSSCCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGGGGHHHHHHHHHG
T ss_pred CCCccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHhcCceEchHHHHHHHHHHhhh
Confidence 643 24456678999999999999999999999887776 667776653
No 18
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=2e-55 Score=398.86 Aligned_cols=263 Identities=20% Similarity=0.319 Sum_probs=228.5
Q ss_pred cchhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEEeCCChHHH
Q 023565 4 NNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGV 82 (280)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~ 82 (280)
...+++++...+++|||++++++++..|.+||+|+|++|||||||||++.+++.++.+ ++ ..+||++|+||||+
T Consensus 13 i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~~-----~~~vv~~ssGN~g~ 87 (323)
T 1v71_A 13 VASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQR-----KAGVLTFSSGNHAQ 87 (323)
T ss_dssp HHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHH-----HHCEEECCSSHHHH
T ss_pred HHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhcC-----CCeEEEeCCCcHHH
Confidence 3467889999999999999999988888999999999999999999999999976543 22 24599999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 023565 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (280)
Q Consensus 83 alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t 162 (280)
|+|++|+.+|++|++|||++++..|+++++.|||+|+.++++ ++++.+.+++++++. +.+|++||+||.++ .||.|
T Consensus 88 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~~-~g~~t 163 (323)
T 1v71_A 88 AIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHVL-AGQGT 163 (323)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHHH-HHHTH
T ss_pred HHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcchh-hhHhH
Confidence 999999999999999999999999999999999999999853 567788888888776 67889999999988 69999
Q ss_pred HHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCCCC
Q 023565 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAGII 233 (280)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~~~ 233 (280)
+++||++|++ .+|+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+. .|++ ..++++|++.+..
T Consensus 164 ~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~ 242 (323)
T 1v71_A 164 AAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHL 242 (323)
T ss_dssp HHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSC
T ss_pred HHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCcccccccCCCC
Confidence 9999999995 7999999999999999999999999999999999999987542 2332 2567888887643
Q ss_pred ---ccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 234 ---PSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 234 ---~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
++.+.++++|+++.|+|+|+++++++|++.+|++ ++++++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~alaa~~~~~ 295 (323)
T 1v71_A 243 GNYTFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMK 295 (323)
T ss_dssp CHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTG
T ss_pred cHHHHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCeEEcHHHHHHHHHHHHhH
Confidence 3345678999999999999999999999887775 677777653
No 19
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=4.1e-54 Score=396.82 Aligned_cols=261 Identities=18% Similarity=0.167 Sum_probs=227.5
Q ss_pred hhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHH
Q 023565 6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (280)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA 85 (280)
+.++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++| ..+||++||||||+|+|
T Consensus 35 ~~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g-----~~~vv~aSsGN~g~alA 109 (372)
T 1p5j_A 35 EFMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQG-----CAHFVCSSAGNAGMAAA 109 (372)
T ss_dssp -----CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTT-----CCEEEECCSSHHHHHHH
T ss_pred HhcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcC-----CCEEEEeCCCHHHHHHH
Confidence 3456677889999999999998888899999999999999999999999999998876 35699999999999999
Q ss_pred HHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 023565 86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP 165 (280)
Q Consensus 86 ~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (280)
++|+.+|++|+||||+++++.|+++++.+||+|+.+++ +++++.+.+++++++.++.+|++||+||.++ .||.|+++
T Consensus 110 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~~~-~G~~t~~~ 186 (372)
T 1p5j_A 110 YAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLIW-EGHASIVK 186 (372)
T ss_dssp HHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHHH-HHHTHHHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHHHH-hhHHHHHH
Confidence 99999999999999999999999999999999999984 6899999999999885689999999999998 69999999
Q ss_pred HHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCCCCc-
Q 023565 166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAGIIP- 234 (280)
Q Consensus 166 Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~-p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~~~~- 234 (280)
||++|++..||+||+|+|+||+++|++.++|+.+ |++|||+|||.+++.+. .|++ ..+++++|+.+.++
T Consensus 187 Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~ 266 (372)
T 1p5j_A 187 ELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGS 266 (372)
T ss_dssp HHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCH
T ss_pred HHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHHHHHHcCCceecCCCceeecccCCCCCCH
Confidence 9999996569999999999999999999999986 89999999999987653 2332 25678888887654
Q ss_pred --cccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHh
Q 023565 235 --SVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKIT 274 (280)
Q Consensus 235 --~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~ 274 (280)
+.+.+.+.++++.|+|+|+++++++|++.+|++ +++++++
T Consensus 267 ~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~epssa~alaa~~~ 315 (372)
T 1p5j_A 267 QALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYS 315 (372)
T ss_dssp HHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCCeechhHHHHHHHHHH
Confidence 234466788999999999999999999998887 5666654
No 20
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=6e-54 Score=394.77 Aligned_cols=253 Identities=19% Similarity=0.179 Sum_probs=222.5
Q ss_pred hHHhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHH
Q 023565 7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF 86 (280)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~ 86 (280)
.+++....+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|. .+||++||||||+|+|+
T Consensus 36 ~~~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~ 110 (364)
T 4h27_A 36 FMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAY 110 (364)
T ss_dssp -----CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHH
T ss_pred hhhhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHH
Confidence 3445667889999999999998889999999999999999999999999999998774 56999999999999999
Q ss_pred HHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHH
Q 023565 87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE 166 (280)
Q Consensus 87 ~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E 166 (280)
+|+.+|++|+||||++++..|+++++.|||+|+.++. +++++.+.+++++++.++++|++||+||.++ .||.|+++|
T Consensus 111 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~~-~G~~t~~~E 187 (364)
T 4h27_A 111 AARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLIW-EGHASIVKE 187 (364)
T ss_dssp HHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHHH-HHHTHHHHH
T ss_pred HHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHHH-HHHHHHHHH
Confidence 9999999999999999999999999999999999984 5789999999999887689999999999988 699999999
Q ss_pred HHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCCCCc--
Q 023565 167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAGIIP-- 234 (280)
Q Consensus 167 i~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~-p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~~~~-- 234 (280)
|++|+++.||+||+|+|+||+++|++.++|+.+ |+++||+|||.+++++. .|++ ..+++++|+.+..+
T Consensus 188 i~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~ 267 (364)
T 4h27_A 188 LKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGAQ 267 (364)
T ss_dssp HHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHH
T ss_pred HHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCcHH
Confidence 999997679999999999999999999999886 88999999999998653 2332 34677888877654
Q ss_pred -cccccccCCeEEEeCHHHHHHHHHHhhhcCCcc
Q 023565 235 -SVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL 267 (280)
Q Consensus 235 -~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~ 267 (280)
+.+.+++.+..+.|+|+|+++++++|++.||++
T Consensus 268 ~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~ 301 (364)
T 4h27_A 268 ALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKIL 301 (364)
T ss_dssp HHHHHTTSCEEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCCEEEEECHHHHHHHHHHHHHHCCCe
Confidence 234466778888999999999999999988876
No 21
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=8.7e-54 Score=406.17 Aligned_cols=258 Identities=25% Similarity=0.327 Sum_probs=229.2
Q ss_pred hhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHH
Q 023565 10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA 89 (280)
Q Consensus 10 ~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~ 89 (280)
++...+++|||+++++|++..|++||+|+|++|||||||+|++.+++.++.+++. ..+||++|+||||+++|++|+
T Consensus 24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~ 99 (514)
T 1tdj_A 24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA 99 (514)
T ss_dssp CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence 6788999999999999998889999999999999999999999999998765432 245999999999999999999
Q ss_pred HcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHH
Q 023565 90 ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ 169 (280)
Q Consensus 90 ~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 169 (280)
++|++++||||+++|..|+++++.+||+|+.++ .+++++.+.+++++++. +.+|++||+||.++ +||+|+++||++
T Consensus 100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~--~~~dda~~~a~ela~e~-g~~~v~pfdnp~~i-aGqgTig~EI~e 175 (514)
T 1tdj_A 100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHG--ANFDEAKAKAIELSQQQ-GFTWVPPFDHPMVI-AGQGTLALELLQ 175 (514)
T ss_dssp HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCC--SSHHHHHHHHHHHHHHH-CCEECCSSCCHHHH-HHHHHHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEEC--CCHHHHHHHHHHHHHhc-CCEeeCCCCCHHHH-HHHHHHHHHHHH
Confidence 999999999999999999999999999999998 46899999999999886 78999999999998 799999999999
Q ss_pred hhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCCCC---cccc
Q 023565 170 DSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAGII---PSVL 237 (280)
Q Consensus 170 q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~~~---~~~~ 237 (280)
|++ .+|+||+|+|+||+++|++.++|+++|++|||||||.+++++. .|++ ..++++|+++..+ ++.+
T Consensus 176 Ql~-~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~~sl~~G~~~~l~~v~tiadGiav~~~g~~~~~l 254 (514)
T 1tdj_A 176 QDA-HLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRL 254 (514)
T ss_dssp HCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHHHHHHHTSCCCCSCCCSSSSTTCCSSCCCHHHHH
T ss_pred HCC-CCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHHHHHhcCCeeecCCccccccchhcCCCChHHHHH
Confidence 995 4999999999999999999999999999999999999998654 2332 2456778776543 4557
Q ss_pred ccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 238 DIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 238 ~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
.++++|+++.|+|+|+.++++.|++.+|++ ++++++++.
T Consensus 255 ~~~~vd~~v~Vsd~ei~~ai~~L~~~~givvEPsgA~alAal~~~~ 300 (514)
T 1tdj_A 255 CQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYI 300 (514)
T ss_dssp HTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCeEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHH
Confidence 788999999999999999999998876665 788888764
No 22
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.1e-53 Score=381.24 Aligned_cols=246 Identities=19% Similarity=0.188 Sum_probs=218.5
Q ss_pred cccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcC
Q 023565 13 ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARG 92 (280)
Q Consensus 13 ~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G 92 (280)
..+.+|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++| ..+||++||||||+|+|++|+.+|
T Consensus 3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g-----~~~vv~~ssGN~g~alA~~a~~~G 77 (318)
T 2rkb_A 3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKG-----CRHLVCSSGGNAGIAAAYAARKLG 77 (318)
T ss_dssp CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CCEEEECCCSHHHHHHHHHHHHHT
T ss_pred CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcC-----CCEEEEECCchHHHHHHHHHHHcC
Confidence 457899999999998878889999999999999999999999999998876 356999999999999999999999
Q ss_pred CcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhC
Q 023565 93 YNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG 172 (280)
Q Consensus 93 ~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~ 172 (280)
++|+||||+++++.|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++||+||.++ .||.|+++||++|++
T Consensus 78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~-~g~~t~~~Ei~~q~~ 153 (318)
T 2rkb_A 78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLIW-KGHASLVQELKAVLR 153 (318)
T ss_dssp CCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHHH-HHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhhc-cchhHHHHHHHHhcC
Confidence 9999999999999999999999999999984 6899999999998875 78999999999988 699999999999996
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCCCCcc---cccc
Q 023565 173 GKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAGIIPS---VLDI 239 (280)
Q Consensus 173 ~~~d~vv~~vG~Gg~~~Gi~~~~k~~~-p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~~~~~---~~~~ 239 (280)
..||+||+|+|+||+++|++.++|+.+ |++|||+|||.+++++. .|++ ..+++++|+.+..+. .+.+
T Consensus 154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~ 233 (318)
T 2rkb_A 154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQ 233 (318)
T ss_dssp SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCCHHHHHHHH
T ss_pred CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHHHHHHHcCCcccCCCCCceecccCCCCCCHHHHHHHH
Confidence 679999999999999999999999885 88999999999987542 2322 246778888766552 3345
Q ss_pred ccCCeEEEeCHHHHHHHHHHhhhcCCcc
Q 023565 240 DILDEVITVSHKIDLHLLHFCCCSSPTL 267 (280)
Q Consensus 240 ~~vd~~~~V~d~ea~~~~~~la~~eG~~ 267 (280)
.+.++++.|+|+|+++++++|++.+|++
T Consensus 234 ~~~~~~~~v~d~e~~~a~~~l~~~~gi~ 261 (318)
T 2rkb_A 234 VCKIHSEVVEDTEAVSAVQQLLDDERML 261 (318)
T ss_dssp HSCEEEEEECHHHHHHHHHHHHHHHCBC
T ss_pred HcCCEEEEECHHHHHHHHHHHHHhcCcE
Confidence 6788999999999999999999988876
No 23
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=9.3e-53 Score=385.37 Aligned_cols=259 Identities=19% Similarity=0.200 Sum_probs=227.9
Q ss_pred HHhhhcccCCCcceec--cccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHH
Q 023565 8 KRDVTELIGNTPMVYL--NNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (280)
Q Consensus 8 ~~~i~~~~~~TPl~~~--~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA 85 (280)
.++++..+++|||+++ +++++..|++||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|
T Consensus 19 ~~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA 93 (351)
T 3aey_A 19 TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAA 93 (351)
T ss_dssp SCCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHH
T ss_pred CCceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHH
Confidence 3678999999999999 99988889999999999999999999999999999998874 5699999999999999
Q ss_pred HHHHHcCCcEEEEeCCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 023565 86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG 164 (280)
Q Consensus 86 ~~a~~~G~~~~ivvp~~-~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 164 (280)
++|+.+|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++ +||.++ .||.|++
T Consensus 94 ~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~-~g~~t~~ 168 (351)
T 3aey_A 94 AYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG--NFDDALRLTQKLTEAF-PVALVNS-VNPHRL-EGQKTLA 168 (351)
T ss_dssp HHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-SEEECST-TCHHHH-HHHHHHH
T ss_pred HHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCC-CCccce-eeeeeHH
Confidence 99999999999999998 999999999999999999995 5889999999998887 5888888 888887 6999999
Q ss_pred HHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCC------CcEEEEEeCCCCccccCCCC---CCcccCcccCCCCc-
Q 023565 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVYGVEPSESAVLNGGQR---GKHLIQGIGAGIIP- 234 (280)
Q Consensus 165 ~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p------~~~vigVe~~~~~~~~~g~~---~~~~~~glg~~~~~- 234 (280)
.||++|++..||+||+|+|+||+++|++.++|+.+| .+||++|||.+++++..+++ ..+.+++++.+..+
T Consensus 169 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~ 248 (351)
T 3aey_A 169 FEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPAS 248 (351)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHHHTSCCSSCCCSCGGGCCSSCTT
T ss_pred HHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhhcCcccCCccchhHhhcCCCCCC
Confidence 999999976699999999999999999999998754 68999999999987755544 24677888876432
Q ss_pred cc----cccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 235 SV----LDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 235 ~~----~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
+. +.++++|+++.|+|+|+++++++|++.+|++ ++++++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~ 301 (351)
T 3aey_A 249 WQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLL 301 (351)
T ss_dssp HHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCEEECchHHHHHHHHHHHH
Confidence 22 2467889999999999999999999998886 677777653
No 24
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.2e-53 Score=387.70 Aligned_cols=258 Identities=22% Similarity=0.249 Sum_probs=227.4
Q ss_pred HhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHH
Q 023565 9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88 (280)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a 88 (280)
+++.+.+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|++|
T Consensus 30 ~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~a 104 (360)
T 2d1f_A 30 TPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAYA 104 (360)
T ss_dssp CCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHHH
T ss_pred CccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHHH
Confidence 56788899999999999988888999999999999999999999999999998874 5699999999999999999
Q ss_pred HHcCCcEEEEeCCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHH
Q 023565 89 AARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI 167 (280)
Q Consensus 89 ~~~G~~~~ivvp~~-~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei 167 (280)
+.+|++|+||||++ +++.|+++++.+||+|+.+++ +++++.+.+++++++.++.+++++ +||.++ .||.|++.||
T Consensus 105 ~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~~~~~~i~~-~n~~~~-~g~~t~~~Ei 180 (360)
T 2d1f_A 105 ARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG--NFDDCLELARKMAADFPTISLVNS-VNPVRI-EGQKTAAFEI 180 (360)
T ss_dssp HHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSS--CHHHHHHHHHHHHHHCTTEEECST-TCHHHH-HHHTHHHHHH
T ss_pred HHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhcCCeEEcCC-CChhhh-hhHHHHHHHH
Confidence 99999999999998 999999999999999999995 588999999999988755888888 888888 6999999999
Q ss_pred HHhhCCCCCEEEEecCCchhHHHHHHHHHhcCC------CcEEEEEeCCCCccccCCCC---CCcccCcccCCCCc-cc-
Q 023565 168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVYGVEPSESAVLNGGQR---GKHLIQGIGAGIIP-SV- 236 (280)
Q Consensus 168 ~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p------~~~vigVe~~~~~~~~~g~~---~~~~~~glg~~~~~-~~- 236 (280)
++|++..||+||+|+|+||+++|++.++|+.+| .+||++|||.+++++..+++ ..+++++|+.+..+ +.
T Consensus 181 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~ 260 (360)
T 2d1f_A 181 VDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPETIATAIRIGSPASWTS 260 (360)
T ss_dssp HHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSSCTTHHH
T ss_pred HHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhcCCccCCccchHHHhCCCCCCcHHH
Confidence 999976799999999999999999999998754 68999999999987755544 24567888876532 21
Q ss_pred ---cccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 237 ---LDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 237 ---~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
+.++++|+++.|+|+|+++++++|++.+|++ ++++++++
T Consensus 261 ~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~eGi~~epssa~alaa~~~~ 309 (360)
T 2d1f_A 261 AVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKA 309 (360)
T ss_dssp HHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCeeECchHHHHHHHHHHH
Confidence 2456889999999999999999999988876 67777765
No 25
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=2.4e-53 Score=391.21 Aligned_cols=259 Identities=22% Similarity=0.325 Sum_probs=228.7
Q ss_pred HhhhcccCCCcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHH
Q 023565 9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88 (280)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a 88 (280)
.++...+++|||++++++++.+|.+||+|+|++|||||||||++.+++.++.+++. ..+||++||||||+|+|++|
T Consensus 52 ~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa 127 (366)
T 3iau_A 52 SPVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAG 127 (366)
T ss_dssp CCGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHH
T ss_pred HHHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHH
Confidence 36778899999999999998889999999999999999999999999987643221 24599999999999999999
Q ss_pred HHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 023565 89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168 (280)
Q Consensus 89 ~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~ 168 (280)
+.+|++|+||||++++..|+++++.+||+|+.++ .+++++.+.+++++++. +++|++||+||.++ +||.|++.||+
T Consensus 128 ~~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~--~~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~i-~g~~t~~~Ei~ 203 (366)
T 3iau_A 128 QRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYG--KTFDEAQTHALELSEKD-GLKYIPPFDDPGVI-KGQGTIGTEIN 203 (366)
T ss_dssp HHTTCCEEEEECTTCCHHHHHHHHHTTCEEEECC--SSHHHHHHHHHHHHHHH-TCEECCSSSSHHHH-HHHHHHHHHHH
T ss_pred HHhCCceEEEeCCCCCHHHHHHHHHCCCeEEEEC--cCHHHHHHHHHHHHHhc-CCEecCCCCChHHH-HHHHHHHHHHH
Confidence 9999999999999999999999999999999998 46899999999998886 78999999999987 79999999999
Q ss_pred HhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCCCC---ccc
Q 023565 169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAGII---PSV 236 (280)
Q Consensus 169 ~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~~~---~~~ 236 (280)
+|+ +.||+||+|+|+||+++|++.++|+.+|+++|++|||.+++.+. .|.+ ..+++++|+.+.. ++.
T Consensus 204 ~q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~ 282 (366)
T 3iau_A 204 RQL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFA 282 (366)
T ss_dssp HHC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHHHHHHHTSCCEESCCCCSSGGGCCSSCCHHHHH
T ss_pred Hhc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHHHHHHcCCCCcCCCccchhhhhcCCCCcHHHHH
Confidence 999 78999999999999999999999999999999999999997653 2332 3456788876543 355
Q ss_pred cccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 237 LDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 237 ~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
+.++++|+++.|+|+|++++++.|++.+|++ ++++++++.
T Consensus 283 ~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~sa~alaa~~~~~ 329 (366)
T 3iau_A 283 KCQELIDGMVLVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYC 329 (366)
T ss_dssp HHHHHCCEEEEECHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCceeECHHHHHHHHHHHHHHcCcEEcHHHHHHHHHHHHHH
Confidence 6788999999999999999999999887776 678887763
No 26
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=1.8e-52 Score=383.66 Aligned_cols=258 Identities=21% Similarity=0.197 Sum_probs=227.0
Q ss_pred HHhhhcccCCCcceeccccccCCCce--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHH
Q 023565 8 KRDVTELIGNTPMVYLNNVVDGCVAR--IAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (280)
Q Consensus 8 ~~~i~~~~~~TPl~~~~~l~~~~g~~--l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA 85 (280)
.+++.+.+++|||++++++++..|++ ||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|
T Consensus 21 ~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA 95 (352)
T 2zsj_A 21 TPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVICASTGNTSASAA 95 (352)
T ss_dssp CCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred CCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHH
Confidence 35788999999999999998877888 9999999999999999999999999998874 5699999999999999
Q ss_pred HHHHHcCCcEEEEeCCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 023565 86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG 164 (280)
Q Consensus 86 ~~a~~~G~~~~ivvp~~-~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 164 (280)
++|+.+|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++ +||.++ .||.|++
T Consensus 96 ~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~-~g~~t~~ 170 (352)
T 2zsj_A 96 AYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALNIVRKIGENF-PVEIVNS-VNPYRI-EGQKTAA 170 (352)
T ss_dssp HHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHHS-SEEECST-TCTHHH-HHHTHHH
T ss_pred HHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CcEECCC-CCcchh-hhHhHHH
Confidence 99999999999999998 999999999999999999995 5889999999998887 5888888 899987 6999999
Q ss_pred HHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCC------CcEEEEEeCCCCccccCCCC---CCcccCcccCCCCc-
Q 023565 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVYGVEPSESAVLNGGQR---GKHLIQGIGAGIIP- 234 (280)
Q Consensus 165 ~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p------~~~vigVe~~~~~~~~~g~~---~~~~~~glg~~~~~- 234 (280)
.||++|++..||+||+|+|+||+++|++.++|+.+| .+|||+|||.+++++..+.+ ..+++++|+.+..+
T Consensus 171 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~ 250 (352)
T 2zsj_A 171 FEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYS 250 (352)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTT
T ss_pred HHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCc
Confidence 999999976699999999999999999999998754 68999999999987655543 24677888876532
Q ss_pred cc----cccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 235 SV----LDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 235 ~~----~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
+. +.+++.|+++.|+|+|+++++++|++.+|++ ++++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~ 302 (352)
T 2zsj_A 251 WKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPASAASVAGLIKL 302 (352)
T ss_dssp HHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCeeECchHHHHHHHHHHH
Confidence 22 2456889999999999999999999988876 67777765
No 27
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=4.3e-52 Score=391.08 Aligned_cols=261 Identities=16% Similarity=0.228 Sum_probs=224.2
Q ss_pred cccCCCcceeccccc----cCC----CceEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC---------
Q 023565 13 ELIGNTPMVYLNNVV----DGC----VARIAAKLETMEP-CSSVKDRIAYSMIKD-----AEDKGLITPGK--------- 69 (280)
Q Consensus 13 ~~~~~TPl~~~~~l~----~~~----g~~l~~K~E~~~p-tGS~K~R~a~~~l~~-----a~~~g~~~~g~--------- 69 (280)
.++++|||+++++++ +.+ +.+||+|+|++|| |||||+|++.+++.. ++++|.+.+|.
T Consensus 74 ~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~ 153 (442)
T 3ss7_X 74 GGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPE 153 (442)
T ss_dssp TTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHH
T ss_pred CCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhh
Confidence 456799999999887 554 4799999999999 999999999999975 78899988876
Q ss_pred -------eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCC
Q 023565 70 -------TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP 142 (280)
Q Consensus 70 -------~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 142 (280)
.+||++|+||||+|+|++|+++|++|+||||++++..|+.+++.|||+|+.++. +++++.+.+++++++.+
T Consensus 154 ~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~ 231 (442)
T 3ss7_X 154 FKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDP 231 (442)
T ss_dssp HHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCT
T ss_pred hhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCC
Confidence 479999999999999999999999999999999999999999999999999994 68999999999998876
Q ss_pred CeEEcCCCCCCccHHHHHHhHHHHHHHhhCC--------CCCEEEEecCCchhHHHHHHHHHhc-CCCcEEEEEeCCCCc
Q 023565 143 DGYLLRQFENPANPKIHYETTGPEIWQDSGG--------KVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVYGVEPSESA 213 (280)
Q Consensus 143 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~~vG~Gg~~~Gi~~~~k~~-~p~~~vigVe~~~~~ 213 (280)
+.+|++++ |+.++.+||.|+++||++|++. .||+||+|+|+||+++|++.++|+. +|+++||+|||.+++
T Consensus 232 ~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~~ 310 (442)
T 3ss7_X 232 NCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSP 310 (442)
T ss_dssp TEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTCC
T ss_pred CceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCch
Confidence 78899885 5555568999999999999842 3669999999999999999999997 899999999999998
Q ss_pred ccc----CCC-----------CCCcccCcccCCCC---ccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------h
Q 023565 214 VLN----GGQ-----------RGKHLIQGIGAGII---PSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------S 268 (280)
Q Consensus 214 ~~~----~g~-----------~~~~~~~glg~~~~---~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~ 268 (280)
++. .|. ...++++||+++.. .+.+.++++|+++.|+|+|+++++++|++.||++ +
T Consensus 311 ~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssaaa 390 (442)
T 3ss7_X 311 CMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAG 390 (442)
T ss_dssp HHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSSHHHHHGGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGGGG
T ss_pred HHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchhHHHHHHhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHHHH
Confidence 642 222 23567788887653 2345568999999999999999999998876665 7
Q ss_pred hhhHHhhh
Q 023565 269 FQKKITYN 276 (280)
Q Consensus 269 ~~~~~~~~ 276 (280)
+++++++.
T Consensus 391 lAa~~~l~ 398 (442)
T 3ss7_X 391 MAGPQRVC 398 (442)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 88877653
No 28
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=1.2e-52 Score=383.22 Aligned_cols=267 Identities=18% Similarity=0.157 Sum_probs=226.5
Q ss_pred ccchhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeC--CC
Q 023565 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEP--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVT--SG 78 (280)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~S--sG 78 (280)
+.+..++++...+++|||+++++|++.+|++||+|+|++|| +||||+|++.+++.+++++|. ++||++| +|
T Consensus 18 ~~~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsG 92 (342)
T 4d9b_A 18 HHLTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQS 92 (342)
T ss_dssp GGGGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTC
T ss_pred chhccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCccc
Confidence 44567889999999999999999988888999999999999 999999999999999999885 5699996 69
Q ss_pred hHHHHHHHHHHHcCCcEEEEeCCCCCH--------HHHHHHHHCCCEEEEECCCCCHHHHHH-HHHHHHHhCCCeEEcCC
Q 023565 79 NTGVGLAFIAAARGYNLIIVMPSTCSM--------ERRIVLRALGAEIILADSALRFEEILE-KGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 79 N~g~alA~~a~~~G~~~~ivvp~~~~~--------~~~~~l~~~Ga~v~~~~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ 149 (280)
|||+|+|++|+.+|++|+||||++++. .|+..++.|||+|+.++...+++++.+ .++++.++. +..|+.+
T Consensus 93 N~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~p 171 (342)
T 4d9b_A 93 NHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQG-FRPYVIP 171 (342)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTT-CCEEECC
T ss_pred HHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcC-CceEEeC
Confidence 999999999999999999999998873 599999999999999987656666654 456666655 4445555
Q ss_pred C--CCCccHHHHHHhHHHHHHHhhC--CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCC---CC
Q 023565 150 F--ENPANPKIHYETTGPEIWQDSG--GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQR---GK 222 (280)
Q Consensus 150 ~--~~~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~---~~ 222 (280)
+ .|+.++ .||.|++.||++|++ ..||+||+|+|+|||++|++.++|+.+|+++||+|||.+++.+..... .+
T Consensus 172 ~~~~n~~~~-~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~ 250 (342)
T 4d9b_A 172 VGGSSALGA-MGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQ 250 (342)
T ss_dssp GGGCSHHHH-HHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHH
T ss_pred CCCCChHHH-HHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHH
Confidence 4 455554 699999999999996 479999999999999999999999999999999999999986543221 24
Q ss_pred cccCcccC-CCCccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc--------hhhhHHhhh
Q 023565 223 HLIQGIGA-GIIPSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL--------SFQKKITYN 276 (280)
Q Consensus 223 ~~~~glg~-~~~~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~--------~~~~~~~~~ 276 (280)
+.+++|+. +..++.+.++++|+++.|+|+|+++++++|++.+|++ ++++++++.
T Consensus 251 t~a~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epsYsa~a~aa~~~~~ 313 (342)
T 4d9b_A 251 AIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGI 313 (342)
T ss_dssp HHHHHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHcCCCCccceEEEecCCCceEecCCHHHHHHHHHHHHhcCccccccHHHHHHHHHHHHH
Confidence 56678887 5678888899999999999999999999999877765 567777653
No 29
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=3.4e-53 Score=386.81 Aligned_cols=265 Identities=16% Similarity=0.131 Sum_probs=225.5
Q ss_pred chhHHhhhcccCCCcceeccccccCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEE--eCC
Q 023565 5 NAIKRDVTELIGNTPMVYLNNVVDGC-V-ARIAAKLETME-P--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIE--VTS 77 (280)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~-g-~~l~~K~E~~~-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~--~Ss 77 (280)
+..++++...+++|||+++++|++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. ++||+ +|+
T Consensus 3 l~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ss 77 (341)
T 1f2d_A 3 VAKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQ 77 (341)
T ss_dssp TTSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETT
T ss_pred cccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcc
Confidence 34567899999999999999998877 7 89999999999 9 999999999999999998875 46999 999
Q ss_pred ChHHHHHHHHHHHcCCcEEEEeCCCCC-----HH------HHHHHHHCCCEEEEECCCCCH---HHHHHHHHHHHHhCCC
Q 023565 78 GNTGVGLAFIAAARGYNLIIVMPSTCS-----ME------RRIVLRALGAEIILADSALRF---EEILEKGEEILKKTPD 143 (280)
Q Consensus 78 GN~g~alA~~a~~~G~~~~ivvp~~~~-----~~------~~~~l~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~ 143 (280)
||||+|+|++|+.+|++|++|||++++ ++ |+.+++.|||+|+.++...+. +++.+.+++++++.+.
T Consensus 78 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~ 157 (341)
T 1f2d_A 78 SNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHK 157 (341)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999887 44 999999999999999865332 3677778888887643
Q ss_pred e-EEcCC-CCCCccHHHHHHhHHHHHHHhhC---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCC
Q 023565 144 G-YLLRQ-FENPANPKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGG 218 (280)
Q Consensus 144 ~-~~~~~-~~~~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g 218 (280)
. ++++| |+||.++ .||.|++.||++|++ ..||+||+|+|+|||++|++.++|+.+|++|||+|||.+++.+...
T Consensus 158 ~~~i~~~~~~np~~~-~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~ 236 (341)
T 1f2d_A 158 PYPIPAGCSEHKYGG-LGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKE 236 (341)
T ss_dssp EEEECGGGTTSTTTT-THHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHHHH
T ss_pred EEEeCCCcCCCCccH-HHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHH
Confidence 3 45688 9999998 589999999999995 4799999999999999999999999999999999999999866432
Q ss_pred CC---CCcccCcccCCC--CccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc--------hhhhHHhh
Q 023565 219 QR---GKHLIQGIGAGI--IPSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL--------SFQKKITY 275 (280)
Q Consensus 219 ~~---~~~~~~glg~~~--~~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~--------~~~~~~~~ 275 (280)
.. ..+.+++++.+. .++.+.++++|+++.|+|+|+++++++|++.||++ ++++++++
T Consensus 237 ~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~egi~~ep~~sa~alaa~~~~ 306 (341)
T 1f2d_A 237 QTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIAL 306 (341)
T ss_dssp HHHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Confidence 21 233445666442 35567888999999999999999999999987765 46677665
No 30
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=1.8e-52 Score=379.76 Aligned_cols=264 Identities=20% Similarity=0.171 Sum_probs=223.5
Q ss_pred chhHHhhhcccCCCcceeccccccCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEEe--CCChH
Q 023565 5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEP--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEV--TSGNT 80 (280)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~--SsGN~ 80 (280)
++.++++...+++|||++++++++..|++||+|+|++|| +||||+|++.+++.+++++|. .+||++ |+|||
T Consensus 9 l~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN~ 83 (325)
T 1j0a_A 9 LAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSNH 83 (325)
T ss_dssp HTTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCHH
T ss_pred hccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchHH
Confidence 456678999999999999999988778999999999999 999999999999999999885 459997 99999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEECCCCCH---HHHHHHHHHHHHhCCCeE-EcCCCCCCcc
Q 023565 81 GVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSALRF---EEILEKGEEILKKTPDGY-LLRQFENPAN 155 (280)
Q Consensus 81 g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~~~~~~~ 155 (280)
|+|+|++|+.+|++|++|||+++ ++.|+++++.|||+|+.++...+. .++.+.+++++++.+..| +..++.|+.+
T Consensus 84 g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~ 163 (325)
T 1j0a_A 84 AFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIG 163 (325)
T ss_dssp HHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHH
T ss_pred HHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHH
Confidence 99999999999999999999999 999999999999999999965432 256778888887764433 4456678887
Q ss_pred HHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCC---CCcccCccc-CC
Q 023565 156 PKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQR---GKHLIQGIG-AG 231 (280)
Q Consensus 156 ~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~---~~~~~~glg-~~ 231 (280)
+ .||.|++.||++|++++||+||+|+|||||++|++.++|+.+|++|||+|||.+++.+..... .+....+++ .+
T Consensus 164 ~-~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~~~~~~~~t~~~~~~~~~g~~~ 242 (325)
T 1j0a_A 164 T-LGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKV 242 (325)
T ss_dssp H-THHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSSHHHHHHHHHHHHHHHTTCCC
T ss_pred H-HHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHhcCCCC
Confidence 7 589999999999996689999999999999999999999999999999999999976543221 112223444 33
Q ss_pred CCccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc--------hhhhHHhh
Q 023565 232 IIPSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL--------SFQKKITY 275 (280)
Q Consensus 232 ~~~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~--------~~~~~~~~ 275 (280)
..|+.+.++++|+ +.|+|+|+++++++|++.+|++ ++++++++
T Consensus 243 ~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi~~ep~ssa~a~aa~~~~ 293 (325)
T 1j0a_A 243 EVRPELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDL 293 (325)
T ss_dssp CSCCEEEECSTTS-TTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHH
T ss_pred CCCcEEecCcccC-CCCCCHHHHHHHHHHHHhhCcccccchHHHHHHHHHHH
Confidence 5678888999999 9999999999999999877665 46666654
No 31
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=4e-51 Score=380.29 Aligned_cols=265 Identities=17% Similarity=0.179 Sum_probs=221.4
Q ss_pred hHHhhh--cccCCCcceeccccccCCC-ceEEEEeCCCC-CCCchhhHHHHHHHHHHH--HcCC----C--------CCC
Q 023565 7 IKRDVT--ELIGNTPMVYLNNVVDGCV-ARIAAKLETME-PCSSVKDRIAYSMIKDAE--DKGL----I--------TPG 68 (280)
Q Consensus 7 ~~~~i~--~~~~~TPl~~~~~l~~~~g-~~l~~K~E~~~-ptGS~K~R~a~~~l~~a~--~~g~----~--------~~g 68 (280)
+...+. ..+++|||+++++|++.+| .+||+|+|++| |+||||+|++.+++.++. +.|. + .+
T Consensus 32 a~~~~~~~~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~- 110 (398)
T 4d9i_A 32 ARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIG- 110 (398)
T ss_dssp HHHHHTTSTTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCS-
T ss_pred HHHHHhhCCCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhcc-
Confidence 334444 4579999999999998888 59999999999 999999999999999884 2331 0 12
Q ss_pred Ce-EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEc
Q 023565 69 KT-TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLL 147 (280)
Q Consensus 69 ~~-~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 147 (280)
.+ +||++|+||||+|+|++|+.+|++|+||||+++++.|+.+++.|||+|+.+++ +++++.+.+++++++. +++|+
T Consensus 111 ~~~~vv~aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v 187 (398)
T 4d9i_A 111 EKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVV 187 (398)
T ss_dssp CCCEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEe
Confidence 34 69999999999999999999999999999999999999999999999999995 6899999999998887 78999
Q ss_pred CC-----CC-CCccHHHHHHhHHHHHHHhhCCC---CCEEEEecCCchhHHHHHHHHHhc--CCCcEEEEEeCCCCcccc
Q 023565 148 RQ-----FE-NPANPKIHYETTGPEIWQDSGGK---VDAFISGIGTGGTVTGAGRFLKEN--NPDIKVYGVEPSESAVLN 216 (280)
Q Consensus 148 ~~-----~~-~~~~~~~g~~t~~~Ei~~q~~~~---~d~vv~~vG~Gg~~~Gi~~~~k~~--~p~~~vigVe~~~~~~~~ 216 (280)
+| |+ |+.+..+||.|++.||++|++.. ||+||+|+|+||+++|++.++|+. .|+++||+|||.+++++.
T Consensus 188 ~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~ 267 (398)
T 4d9i_A 188 QDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIY 267 (398)
T ss_dssp CSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHH
T ss_pred cCcccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHH
Confidence 86 65 34555689999999999998543 999999999999999999999876 578999999999998764
Q ss_pred ----CCCC------CCcccCcccCCCCc---cccccccCCeEEEeCHHHHHHHHHHhhhcCC----cc-------hhhhH
Q 023565 217 ----GGQR------GKHLIQGIGAGIIP---SVLDIDILDEVITVSHKIDLHLLHFCCCSSP----TL-------SFQKK 272 (280)
Q Consensus 217 ----~g~~------~~~~~~glg~~~~~---~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG----~~-------~~~~~ 272 (280)
.|++ ..+++++++++..+ |.+.++++|+++.|+|+|+++++++|++.|| ++ +++++
T Consensus 268 ~s~~~g~~~~~~~~~~tia~gl~~~~p~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~ 347 (398)
T 4d9i_A 268 RSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVL 347 (398)
T ss_dssp HHHHHTSCCCC------CCTTCCCSSCCHHHHHHHHHHCCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHH
T ss_pred HHHHcCCceecCCCCCceeccccCCCCCHHHHHHHHHcCCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHH
Confidence 3333 24567777765432 3445789999999999999999999999988 54 67887
Q ss_pred Hhh
Q 023565 273 ITY 275 (280)
Q Consensus 273 ~~~ 275 (280)
+++
T Consensus 348 ~~~ 350 (398)
T 4d9i_A 348 AAV 350 (398)
T ss_dssp HHH
T ss_pred HHh
Confidence 766
No 32
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=4.8e-49 Score=364.14 Aligned_cols=247 Identities=22% Similarity=0.262 Sum_probs=210.9
Q ss_pred cCCCcceeccccccCCCceEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCC
Q 023565 15 IGNTPMVYLNNVVDGCVARIAAKLETMEP-CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY 93 (280)
Q Consensus 15 ~~~TPl~~~~~l~~~~g~~l~~K~E~~~p-tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~ 93 (280)
+.+|||+++++|++. |.+||+|+|++|| |||||+|++.+++..+. +.+++| .+||++|+||||+|+|++|+++|+
T Consensus 94 ~~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl 169 (389)
T 1wkv_A 94 GKPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGY 169 (389)
T ss_dssp SCSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTC
T ss_pred CCCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCC
Confidence 467999999999876 8899999999999 99999999999999854 444455 569999999999999999999999
Q ss_pred cEEEEeCCCCCHHHHHHHHHCCCEEE-EECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhC
Q 023565 94 NLIIVMPSTCSMERRIVLRALGAEII-LADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG 172 (280)
Q Consensus 94 ~~~ivvp~~~~~~~~~~l~~~Ga~v~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~ 172 (280)
+|+||||++++..|+.+++.+||+|+ .++. ++++++.+.+++++++. +.+|++||+||.++.+||+|++.||++|+.
T Consensus 170 ~~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~-~~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~ 247 (389)
T 1wkv_A 170 RARVYLPGAAEEFGKLLPRLLGAQVIVDPEA-PSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSR 247 (389)
T ss_dssp EEEEEEETTSCHHHHHHHHHTTCEEEEETTC-SSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHcCCEEEEEcCC-CCHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 7773 36788888898887775 689999999999888899999999999984
Q ss_pred ---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCccccCCCCCCcccCcccCCCCccccccccCC-eEEEe
Q 023565 173 ---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLNGGQRGKHLIQGIGAGIIPSVLDIDILD-EVITV 248 (280)
Q Consensus 173 ---~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~glg~~~~~~~~~~~~vd-~~~~V 248 (280)
..||+||+|+|+||+++|++.++|+.+|++|||+|||.+++.+.+ .. .+.. .|..+....+| +++.|
T Consensus 248 ~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~G----i~---~i~~--~~~~~~~~~~dg~~~~V 318 (389)
T 1wkv_A 248 RGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG----IR---RVET--GMLWINMLDISYTLAEV 318 (389)
T ss_dssp HTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTT----CC---CGGG--CCSHHHHSCCCCEEEEE
T ss_pred hcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCcccc----cc---ccCC--cchhhhhheeccEEEEE
Confidence 369999999999999999999999999999999999998865421 01 1111 12233445677 99999
Q ss_pred CHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 249 SHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 249 ~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
+|+|+++++++|++.||++ ++++++++.
T Consensus 319 sd~ea~~a~~~l~~~eGi~~~pssa~alaa~~~l~ 353 (389)
T 1wkv_A 319 TLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKA 353 (389)
T ss_dssp CHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCeEChHHHHHHHHHHHHH
Confidence 9999999999999998886 567777653
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=1.1e-50 Score=369.73 Aligned_cols=265 Identities=19% Similarity=0.186 Sum_probs=217.4
Q ss_pred chhHHhhhcccCCCcceeccccccCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEE--eCC
Q 023565 5 NAIKRDVTELIGNTPMVYLNNVVDGC-V-ARIAAKLETME-P--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIE--VTS 77 (280)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~-g-~~l~~K~E~~~-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~--~Ss 77 (280)
+..++++...+++|||++++++++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. .+||+ +|+
T Consensus 3 ~~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~Gass 77 (338)
T 1tzj_A 3 LQRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQ 77 (338)
T ss_dssp GGGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETT
T ss_pred cccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCch
Confidence 45668899999999999999998877 7 89999999996 8 999999999999999998875 45898 799
Q ss_pred ChHHHHHHHHHHHcCCcEEEEeCCCCCHH--------HHHHHHHCCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEE
Q 023565 78 GNTGVGLAFIAAARGYNLIIVMPSTCSME--------RRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYL 146 (280)
Q Consensus 78 GN~g~alA~~a~~~G~~~~ivvp~~~~~~--------~~~~l~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~ 146 (280)
||||+|+|++|+.+|++|++|||+++++. |+++++.|||+|+.++...+.. .+.+.+++++++.+..++
T Consensus 78 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~ 157 (338)
T 1tzj_A 78 SNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYA 157 (338)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEE
Confidence 99999999999999999999999988765 9999999999999998542211 246677788777644443
Q ss_pred -cCC-CCCCccHHHHHHhHHHHHHHhhC---CCCCEEEEecCCchhHHHHHHHHHhc-CCCcEEEEEeCCCCccccCCCC
Q 023565 147 -LRQ-FENPANPKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVYGVEPSESAVLNGGQR 220 (280)
Q Consensus 147 -~~~-~~~~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~~vG~Gg~~~Gi~~~~k~~-~p~~~vigVe~~~~~~~~~g~~ 220 (280)
.++ |+||.++ .||.|++.||++|++ ..||+||+|+|+||+++|++.++|+. +|+ |||+|||.+++.+.....
T Consensus 158 ~p~~~~~n~~~~-~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~~~~~ 235 (338)
T 1tzj_A 158 IPAGCSDHPLGG-LGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQTREQI 235 (338)
T ss_dssp CCGGGTSSTTTT-THHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHHHHHH
T ss_pred eCCCcCCCcccH-HHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHHHHHH
Confidence 355 8999998 699999999999994 47999999999999999999999998 888 999999999976542221
Q ss_pred ---CCcccCcccCCC-C---ccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc--------hhhhHHhhh
Q 023565 221 ---GKHLIQGIGAGI-I---PSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL--------SFQKKITYN 276 (280)
Q Consensus 221 ---~~~~~~glg~~~-~---~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~--------~~~~~~~~~ 276 (280)
.++.+++++.+. + .+.+.++++|+++.|+|+|+++++++|++.+|++ ++++++++.
T Consensus 236 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~ysa~alaa~~~~~ 306 (338)
T 1tzj_A 236 TRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMV 306 (338)
T ss_dssp HHHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 133445555432 2 2355678899999999999999999999887765 466666653
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=4.4e-48 Score=361.73 Aligned_cols=259 Identities=17% Similarity=0.196 Sum_probs=200.4
Q ss_pred cccC-CCcceeccccccCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHH
Q 023565 13 ELIG-NTPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA 90 (280)
Q Consensus 13 ~~~~-~TPl~~~~~l~~~~-g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~ 90 (280)
.+++ +|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.++|+ ...|+++|+||||+|+|++|+.
T Consensus 72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~ 147 (418)
T 1x1q_A 72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL 147 (418)
T ss_dssp HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence 5664 59999999999877 5899999999999999999999999988887774 2335568999999999999999
Q ss_pred cCCcEEEEeCCCCC---HHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEc-CCCCCCc----cHHHHH
Q 023565 91 RGYNLIIVMPSTCS---MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLL-RQFENPA----NPKIHY 160 (280)
Q Consensus 91 ~G~~~~ivvp~~~~---~~~~~~l~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~----~~~~g~ 160 (280)
+|++|+||||++.. ..|+.+++.|||+|+.++. ..+++++.+.+.+ ++++.++.+|+ +++.|+. ++.+||
T Consensus 148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq 227 (418)
T 1x1q_A 148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ 227 (418)
T ss_dssp HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence 99999999998632 3678899999999999984 3478888887755 45554456665 4444433 233599
Q ss_pred HhHHHHHHHhh----CCCCCEEEEecCCchhHHHHHHHHHhc-CCCcEEEEEeCCCCcc--------ccCCCC-------
Q 023565 161 ETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVYGVEPSESAV--------LNGGQR------- 220 (280)
Q Consensus 161 ~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~~Gi~~~~k~~-~p~~~vigVe~~~~~~--------~~~g~~------- 220 (280)
+|++.||++|+ +..||+||+|+|+||+++|++.++|++ .|++|||||||.+++. +..|.+
T Consensus 228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g~~ 307 (418)
T 1x1q_A 228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSY 307 (418)
T ss_dssp THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEE
T ss_pred HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcccccHHHHHHHHcCCeeeecccc
Confidence 99999999998 345999999999999999999999987 8999999999999731 222222
Q ss_pred -------------CCcccCcccCCCCc---cccccccCCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhh
Q 023565 221 -------------GKHLIQGIGAGIIP---SVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITY 275 (280)
Q Consensus 221 -------------~~~~~~glg~~~~~---~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~ 275 (280)
..++++||..+.+. +.+.+..+|+++.|+|+|+++++++|++.||++ .+++++++
T Consensus 308 ~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~~ 385 (418)
T 1x1q_A 308 MYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKV 385 (418)
T ss_dssp EEBCCC----------------CSBCCHHHHHHHHHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHH
T ss_pred ccccccccccccCCceeeeccCCCCCCHHHHHHHhccCeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHH
Confidence 23566777654322 334566789999999999999999999998887 44555554
No 35
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.9e-47 Score=354.55 Aligned_cols=253 Identities=20% Similarity=0.227 Sum_probs=203.1
Q ss_pred HhhhcccCC-CcceeccccccCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE-EeCCChHHHHHH
Q 023565 9 RDVTELIGN-TPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI-EVTSGNTGVGLA 85 (280)
Q Consensus 9 ~~i~~~~~~-TPl~~~~~l~~~~g-~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv-~~SsGN~g~alA 85 (280)
+.+...+++ |||+++++|++.+| ++||+|+|++|||||||||++.+++..+.++|. .. +| ++||||||+|+|
T Consensus 41 ~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~----~~-vv~~~ssGN~g~a~A 115 (388)
T 1v8z_A 41 YYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK----TR-LIAETGAGQHGVATA 115 (388)
T ss_dssp HHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CE-EEEEESSSHHHHHHH
T ss_pred HHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC----CE-EEEecCchHHHHHHH
Confidence 344457875 99999999988776 899999999999999999999999998888774 23 55 589999999999
Q ss_pred HHHHHcCCcEEEEeCCC-CC--HHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEE-cCCCCCCcc----
Q 023565 86 FIAAARGYNLIIVMPST-CS--MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYL-LRQFENPAN---- 155 (280)
Q Consensus 86 ~~a~~~G~~~~ivvp~~-~~--~~~~~~l~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~~---- 155 (280)
++|+.+|++|+||||++ .+ ..|+.+++.|||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.+
T Consensus 116 ~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~ 195 (388)
T 1v8z_A 116 MAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTI 195 (388)
T ss_dssp HHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHH
T ss_pred HHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhH
Confidence 99999999999999985 23 3578999999999999985 3478888888854 5666545555 456655543
Q ss_pred HHHHHHhHHHHHHHhh----CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcc--------ccCCCC---
Q 023565 156 PKIHYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAV--------LNGGQR--- 220 (280)
Q Consensus 156 ~~~g~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~--------~~~g~~--- 220 (280)
+.+||.|++.||++|+ +..||+||+|+|+||+++|++.+++. +|++|||+|||.++.. +..|.+
T Consensus 196 ~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~vigve~~~~~~~~~~~~~~l~~g~~~~~ 274 (388)
T 1v8z_A 196 VRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLVGVEAGGKGLESGKHSASLNAGQVGVF 274 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEE
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-CCCceEEEEccCccccchhhhhHHHhcCCceec
Confidence 3358999999999998 44699999999999999999998884 8999999999998642 211221
Q ss_pred -----------------CCcccCcccCCCC---ccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc
Q 023565 221 -----------------GKHLIQGIGAGII---PSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL 267 (280)
Q Consensus 221 -----------------~~~~~~glg~~~~---~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~ 267 (280)
..++++++..... .+.+.++++|+++.|+|+|+++++++|++.||++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~ 341 (388)
T 1v8z_A 275 HGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGII 341 (388)
T ss_dssp TTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEEEEEHHHHHHHHHHHHHHHSCC
T ss_pred cccccccccccccccCCCceeeeccccCCCChhHHHHHhcCCcEEEEECHHHHHHHHHHHHHhcCCe
Confidence 2456666665322 2345567789999999999999999999999997
No 36
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=2.7e-47 Score=354.30 Aligned_cols=251 Identities=18% Similarity=0.225 Sum_probs=203.5
Q ss_pred hhcccCC-CcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEE-eCCChHHHHHHHHH
Q 023565 11 VTELIGN-TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIE-VTSGNTGVGLAFIA 88 (280)
Q Consensus 11 i~~~~~~-TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~-~SsGN~g~alA~~a 88 (280)
+..++++ |||+++++|++.+|.+||+|+|++|||||||+|++.+++..+.++|. .++|+ +||||||+|+|++|
T Consensus 48 ~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~-----~~vi~e~ssGNhg~a~A~aa 122 (396)
T 1qop_B 48 LKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK-----SEIIAETGAGQHGVASALAS 122 (396)
T ss_dssp HHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHHH
T ss_pred HHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc-----CEEEEecCchHHHHHHHHHH
Confidence 4457765 99999999999889999999999999999999999999999888875 34666 89999999999999
Q ss_pred HHcCCcEEEEeCCC-CCH--HHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHH-HHhCCCeEEc-CCCCCCc----cHHH
Q 023565 89 AARGYNLIIVMPST-CSM--ERRIVLRALGAEIILADS-ALRFEEILEKGEEI-LKKTPDGYLL-RQFENPA----NPKI 158 (280)
Q Consensus 89 ~~~G~~~~ivvp~~-~~~--~~~~~l~~~Ga~v~~~~~-~~~~~~~~~~a~~~-~~~~~~~~~~-~~~~~~~----~~~~ 158 (280)
+++|++|+||||+. .+. .|+.+++.+||+|+.++. ..+++++.+.+++. +++.++.+|+ +++.|+. ++..
T Consensus 123 ~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~ 202 (396)
T 1qop_B 123 ALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVRE 202 (396)
T ss_dssp HHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHH
T ss_pred HHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHH
Confidence 99999999999985 433 457899999999999984 44788888888764 5554455554 4444432 3334
Q ss_pred HHHhHHHHHHHhh----CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcc--------ccCCCC------
Q 023565 159 HYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAV--------LNGGQR------ 220 (280)
Q Consensus 159 g~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~--------~~~g~~------ 220 (280)
||+|++.||++|+ +..||+||+|+|+||+++|++.+++ ..|++|||+|||.++.. +..|.+
T Consensus 203 g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g~ 281 (396)
T 1qop_B 203 FQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGM 281 (396)
T ss_dssp TTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEE
T ss_pred HHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCeeeeccc
Confidence 8999999999998 5579999999999999999999998 48999999999998641 222221
Q ss_pred --------------CCcccCcccCCCC---ccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc
Q 023565 221 --------------GKHLIQGIGAGII---PSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL 267 (280)
Q Consensus 221 --------------~~~~~~glg~~~~---~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~ 267 (280)
..++++||..+.+ .+.+.+.++|+++.|+|+|+++++++|++.||++
T Consensus 282 ~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~ 345 (396)
T 1qop_B 282 KAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGII 345 (396)
T ss_dssp EEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCC
T ss_pred hhhhcccccCCcCCCceeeccCCCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCc
Confidence 2456667765332 2445667889999999999999999999999997
No 37
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=6.2e-46 Score=347.28 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=187.0
Q ss_pred hcccCC-CcceeccccccCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHH
Q 023565 12 TELIGN-TPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA 89 (280)
Q Consensus 12 ~~~~~~-TPl~~~~~l~~~~-g~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~ 89 (280)
..++++ |||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.+.|+ ...|+++|+||||+|+|++|+
T Consensus 75 ~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa 150 (422)
T 2o2e_A 75 ANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACA 150 (422)
T ss_dssp TTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHH
Confidence 456655 9999999999888 4899999999999999999999999998888775 344567999999999999999
Q ss_pred HcCCcEEEEeCCCCC---HHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEc-CCCCCCc----cHHHH
Q 023565 90 ARGYNLIIVMPSTCS---MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLL-RQFENPA----NPKIH 159 (280)
Q Consensus 90 ~~G~~~~ivvp~~~~---~~~~~~l~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~----~~~~g 159 (280)
++|++|+||||+... ..|+.+++.+||+|+.++. ..+++++.+.+.+ ++++.++.+|+ +++.++. ++..|
T Consensus 151 ~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~ 230 (422)
T 2o2e_A 151 LLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDF 230 (422)
T ss_dssp HHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHH
T ss_pred HcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHH
Confidence 999999999998632 4678899999999999985 3478888888755 46664465665 4443322 33358
Q ss_pred HHhHHHHHHHhh----CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCc--------cccCCCC-------
Q 023565 160 YETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESA--------VLNGGQR------- 220 (280)
Q Consensus 160 ~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~--------~~~~g~~------- 220 (280)
|++++.||++|+ +..||+||+|+|+||+++|++.+++. .|.+|||||||.++. ++..|.+
T Consensus 231 q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g~~ 309 (422)
T 2o2e_A 231 QRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGSF 309 (422)
T ss_dssp TTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCCcccchhHHHHHHcCCceeccccc
Confidence 999999999997 34699999999999999999877764 799999999999862 2333322
Q ss_pred -------------CCcccCcccCCCC---ccccccccCCeEEEeCHHHHHHHHHHhhhcCCcc
Q 023565 221 -------------GKHLIQGIGAGII---PSVLDIDILDEVITVSHKIDLHLLHFCCCSSPTL 267 (280)
Q Consensus 221 -------------~~~~~~glg~~~~---~~~~~~~~vd~~~~V~d~ea~~~~~~la~~eG~~ 267 (280)
..++++||..+.+ .+.+.+..+|+++.|+|+|+++++++|++.||++
T Consensus 310 ~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~ 372 (422)
T 2o2e_A 310 SYLLQDEDGQTIESHSISAGLDYPGVGPEHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGII 372 (422)
T ss_dssp -------------------------------------CCEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred hhhcccccccccCCceeecccCCCCCCHHHHHHHHhCCeeEEEECHHHHHHHHHHHHHHcCCc
Confidence 1345566654322 2345567789999999999999999999999997
No 38
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=6.5e-46 Score=352.52 Aligned_cols=255 Identities=16% Similarity=0.142 Sum_probs=204.3
Q ss_pred hcccCCCcceeccccccC-CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEEeCCChHHHHHHH
Q 023565 12 TELIGNTPMVYLNNVVDG-CV-ARIAAKLETMEPCSSVKDRIAYSMIKDAED---KGLITPGKTTLIEVTSGNTGVGLAF 86 (280)
Q Consensus 12 ~~~~~~TPl~~~~~l~~~-~g-~~l~~K~E~~~ptGS~K~R~a~~~l~~a~~---~g~~~~g~~~vv~~SsGN~g~alA~ 86 (280)
...+++|||+++++|++. +| .+||+|+|++|||||||||++.+++..+.+ ++ .+..+||++||||||.|+|+
T Consensus 125 ~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~---~g~~~Vv~aSsGNtG~AlA~ 201 (486)
T 1e5x_A 125 SAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMK---RPVVGVGCASTGDTSAALSA 201 (486)
T ss_dssp CCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTT---CCCCEEEECCCSHHHHHHHH
T ss_pred cccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCCCHHHHHHHH
Confidence 445889999999999887 77 489999999999999999999888766543 33 12356999999999999999
Q ss_pred HHHHcCCcEEEEeCCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 023565 87 IAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP 165 (280)
Q Consensus 87 ~a~~~G~~~~ivvp~~-~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (280)
+|+++|++|+||+|++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++. +.++++++ ||.++ .||.|+++
T Consensus 202 ~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g--~~dd~~~~a~~l~~~~-~~~~vns~-N~~~i-~gq~t~~~ 276 (486)
T 1e5x_A 202 YCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT--DFDGCMKLIREITAEL-PIYLANSL-NSLRL-EGQKTAAI 276 (486)
T ss_dssp HHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-CEEEGGGS-HHHHH-HHHTHHHH
T ss_pred HHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHhcC-CEEEeCCC-CHHHH-HHHHHHHH
Confidence 9999999999999997 999999999999999999995 5899999999998886 68888887 88887 68999999
Q ss_pred HHHHhhCC-CCCEEEEecCCchhHHHHHHHHHhcC------CCcEEEEEeCCCCcccc----CCC----C---CCcccCc
Q 023565 166 EIWQDSGG-KVDAFISGIGTGGTVTGAGRFLKENN------PDIKVYGVEPSESAVLN----GGQ----R---GKHLIQG 227 (280)
Q Consensus 166 Ei~~q~~~-~~d~vv~~vG~Gg~~~Gi~~~~k~~~------p~~~vigVe~~~~~~~~----~g~----~---~~~~~~g 227 (280)
||++|+++ .||+||+|+|+||+++|++.++|+++ |.+|||+|||++++.+. .|. + .++++++
T Consensus 277 Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~g 356 (486)
T 1e5x_A 277 EILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASA 356 (486)
T ss_dssp HHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC----------
T ss_pred HHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCcc
Confidence 99999964 59999999999999999999998864 78999999999887543 342 1 3567888
Q ss_pred ccCCCCcccc--ccccCCe----EEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 228 IGAGIIPSVL--DIDILDE----VITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 228 lg~~~~~~~~--~~~~vd~----~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
|+.+. |.++ ..+.+|+ ++.|+|+|++++++ +++.+|++ ++++++++.
T Consensus 357 i~i~~-p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~-l~~~eGi~~ePssA~alaa~~~~~ 416 (486)
T 1e5x_A 357 IQIGD-PVSIDRAVYALKKCNGIVEEATEEELMDAMA-QADSTGMFICPHTGVALTALFKLR 416 (486)
T ss_dssp -------CCCHHHHHHHHHTTCEEEEECHHHHHHHHH-HHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ccCCC-CccHHHHHHHHhccCCeEEEECHHHHHHHHH-HHHHCCeEEChhHHHHHHHHHHHH
Confidence 87763 3333 2223444 99999999999999 66778776 677777653
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=1.5e-39 Score=304.66 Aligned_cols=243 Identities=14% Similarity=0.069 Sum_probs=193.7
Q ss_pred cCCCcceeccccccCCCceEEEEeCCC-CCCCchhhHHHHHHH---HHHHHcCCCCCCCeEEEEeCCChHHHHHH-HHHH
Q 023565 15 IGNTPMVYLNNVVDGCVARIAAKLETM-EPCSSVKDRIAYSMI---KDAEDKGLITPGKTTLIEVTSGNTGVGLA-FIAA 89 (280)
Q Consensus 15 ~~~TPl~~~~~l~~~~g~~l~~K~E~~-~ptGS~K~R~a~~~l---~~a~~~g~~~~g~~~vv~~SsGN~g~alA-~~a~ 89 (280)
-++|||+++++ +||+ +|++ |||||||||++.+++ .++ +++ +..+|+++||||||.|+| .+|+
T Consensus 81 ~~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~----~~~~Iv~atsGNtG~A~A~~~a~ 147 (428)
T 1vb3_A 81 AFPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGD----KPVTILTATSGDTGAAVAHAFYG 147 (428)
T ss_dssp CSCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTT----CCEEEEEECSSSHHHHHHHHTTT
T ss_pred CCCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-Hhc----CCCEEEecCCchHHHHHHHHHhh
Confidence 37899999874 7999 7888 599999999999884 445 233 246799999999999999 5999
Q ss_pred HcCCcEEEEeCC-CCCHHHHHHHHHCCCEE--EEECCCCCHHHHHHHHHHHHHh-----CCCeEEcCCCCCCccHHHHHH
Q 023565 90 ARGYNLIIVMPS-TCSMERRIVLRALGAEI--ILADSALRFEEILEKGEEILKK-----TPDGYLLRQFENPANPKIHYE 161 (280)
Q Consensus 90 ~~G~~~~ivvp~-~~~~~~~~~l~~~Ga~v--~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~ 161 (280)
.+|++|+||||+ .+++.|+++|+.+||+| +.++ ++++++.+.+++++++ ..+.++++++ ||.++ .||.
T Consensus 148 ~~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~--g~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~-n~~~~-~gq~ 223 (428)
T 1vb3_A 148 LPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAID--GDFDACQALVKQAFDDEELKVALGLNSANSI-NISRL-LAQI 223 (428)
T ss_dssp CTTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEE--SCHHHHHHHHHHGGGCHHHHHHHTEECCSTT-SHHHH-HHTT
T ss_pred hcCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeC--CCHHHHHHHHHHHHhchhhhhhcCeeeCCCC-CHHHH-HHHH
Confidence 999999999999 49999999999999999 6666 4688888888877642 1256666664 67776 6999
Q ss_pred hHHHHHHHhhCC---CCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCc---cccCCCC-----CCcccCcccC
Q 023565 162 TTGPEIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESA---VLNGGQR-----GKHLIQGIGA 230 (280)
Q Consensus 162 t~~~Ei~~q~~~---~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~---~~~~g~~-----~~~~~~glg~ 230 (280)
+++.||++|+.+ .+|+||+|+|+||+++|++.+++...|.+|||+|++.+.. .+..|.. ..+++++|+.
T Consensus 224 t~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~~l~~~~~~G~~~~~~~~~tis~g~~i 303 (428)
T 1vb3_A 224 CYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDV 303 (428)
T ss_dssp HHHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCCHHHHHHHHSCCCCCCCCCCSSGGGCC
T ss_pred HHHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCChHHHHHHHcCCcccCCCCCcccchhcC
Confidence 999999999964 5999999999999999999999988888899999987631 1223432 3456777766
Q ss_pred CCCcccc------cccc-----CCeEEEeCHHHHHHHHHHhhhcCCcc-------hhhhHHhhh
Q 023565 231 GIIPSVL------DIDI-----LDEVITVSHKIDLHLLHFCCCSSPTL-------SFQKKITYN 276 (280)
Q Consensus 231 ~~~~~~~------~~~~-----vd~~~~V~d~ea~~~~~~la~~eG~~-------~~~~~~~~~ 276 (280)
+. |.++ .++. .++++.|+|+|+++++++| +.+|++ ++++++++.
T Consensus 304 ~~-p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l-~~eGi~~~p~sa~a~aa~~~~~ 365 (428)
T 1vb3_A 304 SQ-PNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMREL-KELGYTSEPHAAVAYRALRDQL 365 (428)
T ss_dssp SS-CTTHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHTTC
T ss_pred CC-CccHHHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHH-HHCCeEECchHHHHHHHHHHHh
Confidence 43 3322 2233 6899999999999999999 998887 567777653
No 40
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=7.2e-36 Score=284.08 Aligned_cols=252 Identities=15% Similarity=0.037 Sum_probs=187.2
Q ss_pred ccCCCccee--ccccccCCCceEEEEeCCCCCCCchhhHHHHHHH---HHHH-HcCC-----CCCCCeEEEEeCCChHHH
Q 023565 14 LIGNTPMVY--LNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMI---KDAE-DKGL-----ITPGKTTLIEVTSGNTGV 82 (280)
Q Consensus 14 ~~~~TPl~~--~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~l---~~a~-~~g~-----~~~g~~~vv~~SsGN~g~ 82 (280)
..+.|||++ ++++ .+||+|.|++|||||||||++.+++ .++. ++|. +.++ .+||++||||||.
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~ 166 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGS 166 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHH
Confidence 367799999 8765 4799999999999999999999884 4443 3452 3343 5699999999999
Q ss_pred HHHHHH--HHcCCcEEEEeCCC-CCHHHHHHH---HHCCCEEEEECCCCCHHHHHHHHHHHHHhCC--CeEEcCCCCCCc
Q 023565 83 GLAFIA--AARGYNLIIVMPST-CSMERRIVL---RALGAEIILADSALRFEEILEKGEEILKKTP--DGYLLRQFENPA 154 (280)
Q Consensus 83 alA~~a--~~~G~~~~ivvp~~-~~~~~~~~l---~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~ 154 (280)
| |++| +..|++++||+|++ +++.++.++ ..+|++++.++ ++++++.+.+++++++.+ +.+.+ ++.|+.
T Consensus 167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~--g~fdda~~~vk~l~~~~~~~~~~~~-~~~Ns~ 242 (514)
T 1kl7_A 167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT--GTFDNCQDIVKAIFGDKEFNSKHNV-GAVNSI 242 (514)
T ss_dssp H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES--SCHHHHHHHHHHHHHCSSCC--CCB-CCCCSC
T ss_pred H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcC--CCHHHHHHHHHHHHhccccccccee-EeeCCC
Confidence 9 6666 89999999999997 888777777 34566777777 579999999999987642 11111 334444
Q ss_pred cHH--HHHHhHHHHHHHhh-C---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcc---ccCCCC-----
Q 023565 155 NPK--IHYETTGPEIWQDS-G---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAV---LNGGQR----- 220 (280)
Q Consensus 155 ~~~--~g~~t~~~Ei~~q~-~---~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~---~~~g~~----- 220 (280)
|+. .||.+.++|+++|+ + +.+|+||+|+|+||++.|++.+.+...|.+|+|+||+++++. +..|..
T Consensus 243 N~~ri~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n~~l~~~~~~G~~~~~~~ 322 (514)
T 1kl7_A 243 NWARILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNENDILDRFLKSGLYERSDK 322 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSCCHHHHHHHHSEEECCSS
T ss_pred CHhHHhhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCcchHHHHHhcCCccCCCC
Confidence 442 69999999999998 4 358999999999999999987656556888999999999432 122321
Q ss_pred -CCcccCcccCCCCccccccc---cCC------------------------------------------eEEEeCHHHHH
Q 023565 221 -GKHLIQGIGAGIIPSVLDID---ILD------------------------------------------EVITVSHKIDL 254 (280)
Q Consensus 221 -~~~~~~glg~~~~~~~~~~~---~vd------------------------------------------~~~~V~d~ea~ 254 (280)
..++.++|... .|.++.+- .+| +++.|+|+|+.
T Consensus 323 ~~~Tis~amdi~-~psn~er~l~~l~~~~~~~~~~~~d~~~v~~~~~~l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e~~ 401 (514)
T 1kl7_A 323 VAATLSPAMDIL-ISSNFERLLWYLAREYLANGDDLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEETS 401 (514)
T ss_dssp CCCCSCGGGCCS-SCTTHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHSEEECCHHHHHHHTTTEEEEECCHHHHH
T ss_pred CCCeechhhhcC-CCCcHHHHHHHHhccccccccccccHHHHHHHHHHHHhcCCeeccHHHHHHhhcCceEEEECHHHHH
Confidence 23555565443 34443211 122 48999999999
Q ss_pred HHHHHhhhcC----Ccc-------hhhhHHhhh
Q 023565 255 HLLHFCCCSS----PTL-------SFQKKITYN 276 (280)
Q Consensus 255 ~~~~~la~~e----G~~-------~~~~~~~~~ 276 (280)
++++.+++.+ |++ +++++.++.
T Consensus 402 ~ai~~l~~~~~~~~G~~~ep~tAv~~aa~~~~~ 434 (514)
T 1kl7_A 402 ETIKKIYESSVNPKHYILDPHTAVGVCATERLI 434 (514)
T ss_dssp HHHHHHHHHCCSSTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEcccHHHHHHHHHHHH
Confidence 9999999988 776 677777765
No 41
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=5.3e-36 Score=281.84 Aligned_cols=241 Identities=12% Similarity=0.092 Sum_probs=187.4
Q ss_pred CcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEEeCCChHHH-HHHHHHHHcC
Q 023565 18 TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSM---IKDAE-DKGLITPGKTTLIEVTSGNTGV-GLAFIAAARG 92 (280)
Q Consensus 18 TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~---l~~a~-~~g~~~~g~~~vv~~SsGN~g~-alA~~a~~~G 92 (280)
|||+++.. ++|+|.|++|||||||||++.++ +.++. ++|. ..+|+++||||||. ++|++|++.|
T Consensus 94 ~pl~~l~~-------~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~G 162 (468)
T 4f4f_A 94 CPLVQTDA-------NEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRDN 162 (468)
T ss_dssp SCEEEEET-------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCSS
T ss_pred CceEEecC-------CeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhccC
Confidence 89988742 69999999999999999999998 67764 5553 34699999999995 4567789999
Q ss_pred CcEEEEeCCC-CCHHHHHHHHHCCC-EE--EEECCCCCHHHHHHHHHHHHHhCC-----CeEEcCCCCCCccHHHHHHhH
Q 023565 93 YNLIIVMPST-CSMERRIVLRALGA-EI--ILADSALRFEEILEKGEEILKKTP-----DGYLLRQFENPANPKIHYETT 163 (280)
Q Consensus 93 ~~~~ivvp~~-~~~~~~~~l~~~Ga-~v--~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~ 163 (280)
++++||||++ +++.|+.+++.+|+ +| +.++ ++++++.+.+++++++.+ +.+++++ .||..+ +||.|+
T Consensus 163 i~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~--g~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~ri-~GQ~T~ 238 (468)
T 4f4f_A 163 TDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIE--GNFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWARI-MPQVVY 238 (468)
T ss_dssp EEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEE--SCHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHHH-GGGHHH
T ss_pred CcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecC--CCHHHHHHHHHHHHhccccccccceEeCCC-CCHHHH-HhHHHH
Confidence 9999999998 99999999999974 54 6676 569999999998876542 3566665 477766 799999
Q ss_pred HHHHHHhhCCCCCE---EEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcccc----CCCC-----CCcccCcccCC
Q 023565 164 GPEIWQDSGGKVDA---FISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAVLN----GGQR-----GKHLIQGIGAG 231 (280)
Q Consensus 164 ~~Ei~~q~~~~~d~---vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~----~g~~-----~~~~~~glg~~ 231 (280)
++||++|++ .+|. |+||+|+||+++|++.+.+...|..|+|+| +.+++++. .|.+ ..+++++|..+
T Consensus 239 ~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~~l~~~l~~G~~~~~~~~~Tia~smdi~ 316 (468)
T 4f4f_A 239 YFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDNDILSRTLESGAYEMRGVAQTTSPSMDIQ 316 (468)
T ss_dssp HHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCCHHHHHHHHSEEECCCCCCCSCGGGCCS
T ss_pred HHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCchHHHHHHHcCCceecCCcceeCchhhcC
Confidence 999999994 7899 999999999999999885555588899999 77776542 3432 35667777664
Q ss_pred CCcccccc----------------------------------ccCC--eEEEeCHHHHHHHHHHhhhcCC-------cch
Q 023565 232 IIPSVLDI----------------------------------DILD--EVITVSHKIDLHLLHFCCCSSP-------TLS 268 (280)
Q Consensus 232 ~~~~~~~~----------------------------------~~vd--~~~~V~d~ea~~~~~~la~~eG-------~~~ 268 (280)
. |.++.+ ...+ ..+.|+|+|+.++++.+++.+| +.+
T Consensus 317 ~-~sN~erl~~~l~~~d~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~VsD~ei~~ai~~l~~~~g~~vEP~~Ava 395 (468)
T 4f4f_A 317 I-SSNFERLLFEAHGRDAAAVRGLMQGLKQSGGFTISEKPLSAIRSEFSAGRSTVDETAATIESVLSKDGYLLDPHSAIG 395 (468)
T ss_dssp S-CTTHHHHHHHHTTTCHHHHHHHHHHHHHHSEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHSCCCCHHHHHH
T ss_pred c-cchHHHHHHHHhccCHHHHHHHHHHHHhcCCeeccHHHHHHHhhcceEEEECHHHHHHHHHHHHHHCCEEECHhHHHH
Confidence 2 222110 0111 2689999999999999876555 457
Q ss_pred hhhHHhhh
Q 023565 269 FQKKITYN 276 (280)
Q Consensus 269 ~~~~~~~~ 276 (280)
++++.+|.
T Consensus 396 ~aa~~~~~ 403 (468)
T 4f4f_A 396 VKVAREKA 403 (468)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 88888773
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=3.9e-34 Score=269.42 Aligned_cols=246 Identities=13% Similarity=0.054 Sum_probs=180.7
Q ss_pred CcceeccccccCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEEeCCChHHHHHHHHHH-HcC
Q 023565 18 TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSM---IKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAA-ARG 92 (280)
Q Consensus 18 TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~---l~~a~-~~g~~~~g~~~vv~~SsGN~g~alA~~a~-~~G 92 (280)
|||+++..- .+.++|+|.|++|||||||||++.++ +.++. ++|. ..+|+++||||||.|+|++++ ..|
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G 175 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG 175 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence 788887520 01239999999999999999999998 77775 3453 345999999999999777776 899
Q ss_pred CcEEEEeCCC-CCHHHHHHHHHCCC---EEEEECCCCCHHHHHHHHHHHHHhC-----CCeEEcCCCCCCccHHHHHHhH
Q 023565 93 YNLIIVMPST-CSMERRIVLRALGA---EIILADSALRFEEILEKGEEILKKT-----PDGYLLRQFENPANPKIHYETT 163 (280)
Q Consensus 93 ~~~~ivvp~~-~~~~~~~~l~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~~g~~t~ 163 (280)
++++||+|++ +++.|+.+|+.+|+ +++.++ ++++++.+.++++..+. -+..+++++ ||..+ +|+.+.
T Consensus 176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~--G~fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~ri-~gQ~ty 251 (487)
T 3v7n_A 176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVN--GVFDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWARV-VAQVVY 251 (487)
T ss_dssp EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEE--SCHHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHHH-HHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEEC--CCHHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHHH-HhHHHH
Confidence 9999999998 99999999999998 788887 46899999998887531 256667665 67766 699988
Q ss_pred HHHHHHhhC---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCc---cccCCCC-----CCcc---cCccc
Q 023565 164 GPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESA---VLNGGQR-----GKHL---IQGIG 229 (280)
Q Consensus 164 ~~Ei~~q~~---~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~---~~~~g~~-----~~~~---~~glg 229 (280)
++|+..|+. +.+|+|+||+|+||+++|++.+.+...|..|+|++++++.+ ++..|.. ..|+ +++|.
T Consensus 252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n~~l~~~~~~G~~~~~~~~~Ti~t~s~smd 331 (487)
T 3v7n_A 252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNENDVLDEFFRTGAYRVRSAQDTYHTSSPSMD 331 (487)
T ss_dssp HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTCHHHHHHHHHSEEEC---------------
T ss_pred HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCCcHHHHHHHcCCcccCCCCCccccCCchhc
Confidence 888887773 35999999999999999999886665687899999999833 1223432 2345 66665
Q ss_pred CCCCcccccc---c-----------------------------------cCCeEEEeCHHHHHHHHHHhhhcCCcc----
Q 023565 230 AGIIPSVLDI---D-----------------------------------ILDEVITVSHKIDLHLLHFCCCSSPTL---- 267 (280)
Q Consensus 230 ~~~~~~~~~~---~-----------------------------------~vd~~~~V~d~ea~~~~~~la~~eG~~---- 267 (280)
.+. |.++.+ . ..-..+.|+|+|+.++++.+++.+|.+
T Consensus 332 I~~-psn~er~l~~l~~~d~~~~~~~m~~l~~~g~~~l~~~~~~~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dPh 410 (487)
T 3v7n_A 332 ISK-ASNFERFVFDLLGRDPARVVQLFRDVEQKGGFDLAASGDFARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDTH 410 (487)
T ss_dssp ----CHHHHHHHHHHTTTCHHHHHHHHHHHHHHSEEETTTTTCTHHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCHH
T ss_pred cCC-CccHHHHHHHHhCCCHHHHHHHHHHHHhcCCeecccchhHHHHHhhcceEEEECHHHHHHHHHHHHHHcCEEEChh
Confidence 543 322210 0 011357899999999999999988876
Q ss_pred ---hhhhHHhh
Q 023565 268 ---SFQKKITY 275 (280)
Q Consensus 268 ---~~~~~~~~ 275 (280)
+++++.++
T Consensus 411 tAva~aaa~~~ 421 (487)
T 3v7n_A 411 TADGLKVAREH 421 (487)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHHh
Confidence 55666554
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.26 E-value=0.43 Score=36.37 Aligned_cols=97 Identities=24% Similarity=0.194 Sum_probs=65.5
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQF 150 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (280)
+++..+.|..|..+|...+..|.+++++-.. +.+.+.++..|..++..+.+.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~---~~~~~~~~~~g~~~i~gd~~~------------------------- 60 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETS---RTRVDELRERGVRAVLGNAAN------------------------- 60 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESC---HHHHHHHHHTTCEEEESCTTS-------------------------
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECC---HHHHHHHHHcCCCEEECCCCC-------------------------
Confidence 3888889999999999999899888777653 456666666777665544221
Q ss_pred CCCccHHHHHHhHHHHHHHhhC-CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeC
Q 023565 151 ENPANPKIHYETTGPEIWQDSG-GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEP 209 (280)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~-~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~ 209 (280)
. |++++.+ .+.|.||++++.-....-++..++.++|+.+|++...
T Consensus 61 -----~---------~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 61 -----E---------EIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp -----H---------HHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred -----H---------HHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 0 1122221 2468888888876555556667788888888877553
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=91.48 E-value=1.7 Score=35.32 Aligned_cols=76 Identities=21% Similarity=0.317 Sum_probs=56.4
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEe-------CC--CCCHHHHHHHH
Q 023565 42 EPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-------PS--TCSMERRIVLR 112 (280)
Q Consensus 42 ~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv-------p~--~~~~~~~~~l~ 112 (280)
+|.--+=+......+.+|.+.|. ..-||.+|+|.++..++-.. -|++.++|. |. ..+++..+.|+
T Consensus 22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45556677788888889998885 34344445599987666643 788999888 42 35899999999
Q ss_pred HCCCEEEEECC
Q 023565 113 ALGAEIILADS 123 (280)
Q Consensus 113 ~~Ga~v~~~~~ 123 (280)
..|.+|+....
T Consensus 96 ~~G~~V~t~tH 106 (201)
T 1vp8_A 96 KRGAKIVRQSH 106 (201)
T ss_dssp HTTCEEEECCC
T ss_pred hCCCEEEEEec
Confidence 99999998753
No 45
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.02 E-value=2.3 Score=37.29 Aligned_cols=61 Identities=23% Similarity=0.194 Sum_probs=45.6
Q ss_pred HHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+.+...+++|.+-+| ..+|..|.+.+..|+.+|.+++++.. ++.|++.++.+|++.++..
T Consensus 157 ~~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVI-SGIGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp HHHHTTTCCTTSEEEE-ECCSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEET
T ss_pred HHHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence 3455667788887455 55688999999999999997665543 4678888999999766544
No 46
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.35 E-value=1.9 Score=37.60 Aligned_cols=58 Identities=28% Similarity=0.292 Sum_probs=43.1
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+...+++|.+-+|...+|.-|.+++..|+..|.+++++.. ++.+++.++.+|++.++.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETID 191 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence 4456788877555555899999999999999987666553 457788888888865543
No 47
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.07 E-value=5 Score=31.51 Aligned_cols=94 Identities=19% Similarity=0.230 Sum_probs=60.7
Q ss_pred EEEeCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCC
Q 023565 72 LIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQF 150 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (280)
++..+.|..|..+|...... |.+++++-.. +.+...++..|.+++..+.+
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~---~~~~~~~~~~g~~~~~gd~~-------------------------- 92 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGKISLGIEIR---EEAAQQHRSEGRNVISGDAT-------------------------- 92 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCSCEEEEESC---HHHHHHHHHTTCCEEECCTT--------------------------
T ss_pred EEEECCCHHHHHHHHHHHhccCCeEEEEECC---HHHHHHHHHCCCCEEEcCCC--------------------------
Confidence 77778999999999998888 8887776432 45566666666665543321
Q ss_pred CCCccHHHHHHhHHHHHHHhh--CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEE
Q 023565 151 ENPANPKIHYETTGPEIWQDS--GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGV 207 (280)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~--~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigV 207 (280)
+ . |.+++. -.+.|.||++++.-....-+...++..+|..+|+..
T Consensus 93 -~---~---------~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 93 -D---P---------DFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp -C---H---------HHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred -C---H---------HHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 0 0 111121 134688888887765555566667777777777764
No 48
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=89.97 E-value=3 Score=36.43 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=49.3
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCC
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~ 126 (280)
+.......+|.+ |+...+|.-|...+..|+.+|...++++.. ++.|++.++.+||+.++.....+
T Consensus 152 ~~~~~~~~~g~~-VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~--~~~k~~~a~~lGa~~~i~~~~~~ 216 (346)
T 4a2c_A 152 AFHLAQGCENKN-VIIIGAGTIGLLAIQCAVALGAKSVTAIDI--SSEKLALAKSFGAMQTFNSSEMS 216 (346)
T ss_dssp HHHHTTCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCSEEEETTTSC
T ss_pred HHHHhccCCCCE-EEEECCCCcchHHHHHHHHcCCcEEEEEec--hHHHHHHHHHcCCeEEEeCCCCC
Confidence 344556678877 666677889999999999999998777643 56889999999998776654333
No 49
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.83 E-value=2.8 Score=36.61 Aligned_cols=59 Identities=20% Similarity=0.322 Sum_probs=43.6
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
+.+.+++|.+-+|...+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+...
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINA 200 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeC
Confidence 3456788877455555899999999999999997666554 4578888888988765443
No 50
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.36 E-value=3.7 Score=36.82 Aligned_cols=58 Identities=26% Similarity=0.256 Sum_probs=42.8
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+.+...+++|.+ |+..++|.-|...+..|+.+|.+.++++. .++.|++.++.+||+++
T Consensus 177 al~~~~~~~g~~-VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 177 GAVTAGVGPGST-VYVAGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIA 234 (398)
T ss_dssp HHHHTTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEE
T ss_pred HHHHcCCCCCCE-EEEECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcEE
Confidence 334556778877 55566799999999999999985444442 24688899999999843
No 51
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=88.76 E-value=4.1 Score=35.46 Aligned_cols=58 Identities=24% Similarity=0.310 Sum_probs=43.6
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHH-HHCCCEEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALGAEIILA 121 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l-~~~Ga~v~~~ 121 (280)
+...+++|.+-+|+..+|.-|.+++..++..|.+++++.. ++.+++.+ +.+|++.+..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEEE
Confidence 5667788888566666699999999999999997666543 35677777 8888865543
No 52
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.61 E-value=1.6 Score=38.94 Aligned_cols=52 Identities=19% Similarity=0.085 Sum_probs=39.9
Q ss_pred CCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 66 TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 66 ~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
.+|.+-+|...+|..|.+.+..|+.+|.+++++. ++.|++.++.+||+.++.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~ 214 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFD 214 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEE
Confidence 6777755555559999999999999999876654 357888889999865544
No 53
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.55 E-value=3.3 Score=36.49 Aligned_cols=58 Identities=21% Similarity=0.176 Sum_probs=43.7
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+...+++|.+-+|...+|.-|.+++..|+..|.+++++.. ++.+++.++.+|++.++.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~ 218 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGIN 218 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEe
Confidence 5566788877555557899999999999999998665543 457778888888876544
No 54
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.91 E-value=4.2 Score=36.00 Aligned_cols=57 Identities=26% Similarity=0.282 Sum_probs=42.5
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+...+++|.+ |+..++|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.++.
T Consensus 183 ~~~~~~~g~~-VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 183 EKGHLRAGDR-VVVQGTGGVALFGLQIAKATGAEVIVTSS---SREKLDRAFALGADHGIN 239 (363)
T ss_dssp TTTCCCTTCE-EEEESSBHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEec---CchhHHHHHHcCCCEEEc
Confidence 4567788877 54455899999999999999997666543 457778888888865443
No 55
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.80 E-value=3 Score=36.73 Aligned_cols=59 Identities=19% Similarity=0.115 Sum_probs=42.0
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+.+...+++|.+ |+...+|..|.+.+..|+..|..-++.+. .++.|++.++.+||+.++
T Consensus 158 al~~~~~~~g~~-VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 158 GAELANIKLGDT-VCVIGIGPVGLMSVAGANHLGAGRIFAVG--SRKHCCDIALEYGATDII 216 (352)
T ss_dssp HHHHTTCCTTCC-EEEECCSHHHHHHHHHHHTTTCSSEEEEC--CCHHHHHHHHHHTCCEEE
T ss_pred HHHhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCcEEEEEC--CCHHHHHHHHHhCCceEE
Confidence 445666788877 55556799999999999999984333332 346778888888986543
No 56
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.59 E-value=4.4 Score=35.53 Aligned_cols=54 Identities=30% Similarity=0.340 Sum_probs=43.0
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v 118 (280)
+...+++|.+-+|...+|.-|.+++..|+..|.+++++ .++.+++.++.+|++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 56677888775555558999999999999999976655 3467888889999988
No 57
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.59 E-value=6.1 Score=35.98 Aligned_cols=50 Identities=16% Similarity=0.260 Sum_probs=39.3
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
+|+.++.|..|..+|......|++++++-.+ +.+++.++.+|.+++.-+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d---~~~v~~~~~~g~~vi~GDa 55 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHD---PDHIETLRKFGMKVFYGDA 55 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECC---HHHHHHHHHTTCCCEESCT
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECC---HHHHHHHHhCCCeEEEcCC
Confidence 3888899999999999999999988887533 5677777777777666554
No 58
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=86.95 E-value=3 Score=36.63 Aligned_cols=58 Identities=26% Similarity=0.447 Sum_probs=42.6
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+...+++|.+-+|...+|..|.+++..|+..|.+++++... +.+++.++.+|++.+..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~~ 210 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVLP 210 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEec
Confidence 56677888775555556999999999999999977666543 35666777788866543
No 59
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=86.88 E-value=3.6 Score=35.66 Aligned_cols=61 Identities=26% Similarity=0.351 Sum_probs=45.2
Q ss_pred HHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+.+...+++|.+-+|...+|.-|.+.+..|+.+|.+++++. +..+++.++.+|++.++..
T Consensus 143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~~ 203 (321)
T 3tqh_A 143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCINY 203 (321)
T ss_dssp HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEET
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEeC
Confidence 344666788887744444589999999999999999866654 3456888899999865543
No 60
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.59 E-value=9.2 Score=32.30 Aligned_cols=54 Identities=17% Similarity=0.115 Sum_probs=33.7
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~l~~~Ga~v~~~~ 122 (280)
..-|||.+++--|+++|..-...|.+++++-... .-....+.++..|.+++.+.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3558888888888888888777787765543221 11223445566777665543
No 61
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=86.45 E-value=4 Score=36.30 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=43.0
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+.+...+++|.+ |+..++|..|.+.+..|+.+|.+.++++. .++.+++.++.+|++.++.
T Consensus 174 ~l~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 174 GVDLSGIKAGST-VAILGGGVIGLLTVQLARLAGATTVILST--RQATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEEC
T ss_pred HHHhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEEC
Confidence 345556778877 54456699999999999999985444443 2467888888899875543
No 62
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=86.23 E-value=5.3 Score=35.32 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=43.3
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
+.+.+++|.+-+|...+|.-|.+++..|+..|.+++++.. ++.+++.++.+|++.+...
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 215 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPINY 215 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEec
Confidence 3456778877444444799999999999999997665553 3678888888999765543
No 63
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.06 E-value=3.4 Score=36.14 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=43.2
Q ss_pred HHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 60 ~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+...+++|.+-+|...+|..|.+++..|+..|.+++++.... .+++.++.+|++.++..
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~ 196 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDT 196 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEET
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeC
Confidence 3556778888755655667999999999999999877665432 45666777888765543
No 64
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=85.68 E-value=4.8 Score=35.92 Aligned_cols=53 Identities=25% Similarity=0.354 Sum_probs=39.8
Q ss_pred CCCeEEEEe-CCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 67 PGKTTLIEV-TSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 67 ~g~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
+|.+-+|.. .+|..|.+.+..|+.+|.+++++.. ++.|++.++.+|++.++..
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHHHTTCSCEEET
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCcEEEeC
Confidence 345545543 7799999999999999998766653 5688999999999755543
No 65
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.21 E-value=12 Score=31.48 Aligned_cols=53 Identities=23% Similarity=0.145 Sum_probs=29.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
..-|||.+++--|+++|..-...|.++++. ..+.. .+..+.++..|.+++.+.
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~-~~~~~~~~~~~~~l~~~g~~~~~~~ 64 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILN-DIRATLLAESVDTLTRKGYDAHGVA 64 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEC-CSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 455777777888888887777666654432 11111 122334445555555443
No 66
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=85.16 E-value=8.8 Score=33.79 Aligned_cols=56 Identities=18% Similarity=0.173 Sum_probs=41.8
Q ss_pred CCCCCCCeEEEEeCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 63 GLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 63 g~~~~g~~~vv~~SsGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
..+++|.+ |+..+.|..|...+..|+.+ |.+++++.+ ++.|++.++.+||+.++-.
T Consensus 182 ~~~~~g~~-VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~ 238 (359)
T 1h2b_A 182 RTLYPGAY-VAIVGVGGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVVDA 238 (359)
T ss_dssp TTCCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred cCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEEec
Confidence 56778877 55555689999999999999 987555443 4678888999999765443
No 67
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=84.84 E-value=5.1 Score=33.56 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=17.6
Q ss_pred CeEEEEeCCCh--HHHHHHHHHHHcCCcEEEEe
Q 023565 69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 69 ~~~vv~~SsGN--~g~alA~~a~~~G~~~~ivv 99 (280)
.+-|||..+|+ -|+++|......|.++++.-
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~ 39 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTY 39 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEE
Confidence 45566665554 55666666666666554443
No 68
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.64 E-value=3.6 Score=36.10 Aligned_cols=51 Identities=18% Similarity=0.283 Sum_probs=36.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
..-+|...+|.-|.+.+..|+..|.+++++.. ++.+++.++.+|++.++..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 216 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNE 216 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEET
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEEC
Confidence 34345557899999999999999997666654 2356777788898765544
No 69
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=84.02 E-value=11 Score=32.58 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=41.2
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+...+++|.+-+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~ 194 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAA 194 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEE
Confidence 4456678877666666799999999999999987665543 3566677788887544
No 70
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=83.65 E-value=4.3 Score=37.19 Aligned_cols=57 Identities=33% Similarity=0.362 Sum_probs=45.0
Q ss_pred CCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 63 g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
..+++|.+-+|...+|..|.+.+..|+.+|.+++++.. ++.|++.++.+||+.++..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence 46778877444444599999999999999998877763 6789999999999766544
No 71
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=83.61 E-value=7.8 Score=33.83 Aligned_cols=58 Identities=22% Similarity=0.202 Sum_probs=41.5
Q ss_pred HHHc-CCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 59 AEDK-GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 59 a~~~-g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+..+ ..+++|.+-+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 157 al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 157 MVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADET 215 (343)
T ss_dssp HHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence 4433 45778877666666699999999999999987665543 3567777777787644
No 72
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.54 E-value=5 Score=36.12 Aligned_cols=55 Identities=25% Similarity=0.388 Sum_probs=40.5
Q ss_pred CCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 64 ~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
.+++|.+ |+..++|.-|.+.+..|+.+|..-++.+. .++.|++.++.+||+.++.
T Consensus 210 ~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 210 GIRPGDN-VVILGGGPIGLAAVAILKHAGASKVILSE--PSEVRRNLAKELGADHVID 264 (404)
T ss_dssp CCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEEC
T ss_pred CCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEEc
Confidence 5788877 55556699999999999999985444443 2467888888999875543
No 73
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=83.54 E-value=8.8 Score=33.88 Aligned_cols=59 Identities=20% Similarity=0.339 Sum_probs=42.1
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
+...+++|.+ |+...+|.-|.+.+..|+.+|.+.++.+. .++.+++.++.+|++.++..
T Consensus 184 ~~~~~~~g~~-VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 184 NALKVTPASS-FVTWGAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVINS 242 (371)
T ss_dssp TTTCCCTTCE-EEEESCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEET
T ss_pred hccCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEecC
Confidence 4556778877 55556799999999999999985333332 24678888888998755443
No 74
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=83.41 E-value=13 Score=32.57 Aligned_cols=56 Identities=21% Similarity=0.340 Sum_probs=42.2
Q ss_pred cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 62 ~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
...+++|.+-+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF 220 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence 566778877666666799999999999999987665543 35677778888886544
No 75
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.35 E-value=8.7 Score=33.75 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=42.6
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+...+++|.+-+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 213 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGFN 213 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEEe
Confidence 4556778877555555799999999999999987665543 356777778889875543
No 76
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=82.89 E-value=13 Score=29.36 Aligned_cols=53 Identities=30% Similarity=0.462 Sum_probs=36.0
Q ss_pred cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCE
Q 023565 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (280)
Q Consensus 62 ~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~ 117 (280)
...+++|.+-+|+..+|..|.+++..++..|.+++++.. ++.+.+.++.+|++
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~ 85 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVE 85 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCS
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCC
Confidence 455677777455555799999999999888887655443 34555566666654
No 77
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=82.83 E-value=6.6 Score=34.54 Aligned_cols=60 Identities=27% Similarity=0.349 Sum_probs=45.1
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIIL 120 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~ 120 (280)
+.+.+++|.+-+|...+|..|.+....|+.+|.+.++++.... ..++++.++.+||+.++
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 4456788877444444599999999999999999888875543 35577888899997554
No 78
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=82.71 E-value=12 Score=33.36 Aligned_cols=57 Identities=25% Similarity=0.180 Sum_probs=42.1
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+.+...+++|.+ |+..++|.-|...+..|+.+|. +++++.. ++.+++.++.+|++++
T Consensus 177 al~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 177 GCVSAGVKPGSH-VYIAGAGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFETI 234 (398)
T ss_dssp HHHHTTCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEEE
T ss_pred HHHHcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcEE
Confidence 344556788877 5555679999999999999998 5555443 4578888999999743
No 79
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=82.54 E-value=11 Score=32.93 Aligned_cols=59 Identities=27% Similarity=0.260 Sum_probs=41.8
Q ss_pred HHcCCCCCCCeEEEEeCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 60 ~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
.++..+++|.+-+|+..+|..|.+++..++.. |.+++++.. ++.+++.++.+|++.+..
T Consensus 163 l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 222 (347)
T 1jvb_A 163 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVIN 222 (347)
T ss_dssp HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEec
Confidence 33455678877666666669999999999998 987555443 356777778888865543
No 80
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=82.20 E-value=13 Score=32.49 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=42.2
Q ss_pred HHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
.+.++..+++|.+-+|+..+|..|.+++..++..|.+++++... +.+++.++.+|++.+.
T Consensus 160 ~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 160 KALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVFI 219 (347)
T ss_dssp HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceEE
Confidence 34444456788776666666999999999999999876665532 2455667778886443
No 81
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=81.79 E-value=5.7 Score=32.39 Aligned_cols=75 Identities=21% Similarity=0.320 Sum_probs=52.8
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEe-------CC--CCCHHHHHHHH
Q 023565 42 EPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-------PS--TCSMERRIVLR 112 (280)
Q Consensus 42 ~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv-------p~--~~~~~~~~~l~ 112 (280)
+|.--+=+......+.+|.+.|. ..-||.+++|.++..++-.. -| +.++|. |. ..+++..+.|+
T Consensus 30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45666777788888889998875 34344444598886655533 45 666666 32 35789999999
Q ss_pred HCCCEEEEECC
Q 023565 113 ALGAEIILADS 123 (280)
Q Consensus 113 ~~Ga~v~~~~~ 123 (280)
..|.+|+....
T Consensus 103 ~~G~~V~t~tH 113 (206)
T 1t57_A 103 ERGVNVYAGSH 113 (206)
T ss_dssp HHTCEEECCSC
T ss_pred hCCCEEEEeec
Confidence 99999987653
No 82
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.65 E-value=8.3 Score=33.77 Aligned_cols=57 Identities=25% Similarity=0.303 Sum_probs=40.9
Q ss_pred HHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 60 ~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
.+...+++|.+-+| .++|.-|.+.+..|+.+|.++++ +. .++.+++.++.+|++.++
T Consensus 161 l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~-~~--~~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 161 CRRAGVQLGTTVLV-IGAGPIGLVSVLAAKAYGAFVVC-TA--RSPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEE-EE--SCHHHHHHHHHTTCSEEE
T ss_pred HHhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCEEEE-Ec--CCHHHHHHHHHhCCCEEE
Confidence 34445678877444 55699999999999999998433 32 246788888999997543
No 83
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=81.64 E-value=8 Score=34.39 Aligned_cols=59 Identities=31% Similarity=0.340 Sum_probs=43.1
Q ss_pred HHHcCC-CCCCCeEEEEeCCChHHHHHHHHHHHcC-CcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 59 AEDKGL-ITPGKTTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 59 a~~~g~-~~~g~~~vv~~SsGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+.+... +++|.+-+|.. +|..|.+.+..|+.+| .+++++.+ ++.+++.++.+|++.++.
T Consensus 186 al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi~ 246 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTLN 246 (380)
T ss_dssp HHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEEE
T ss_pred HHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEEe
Confidence 344555 77887745554 8999999999999999 47666553 357888888999865543
No 84
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=81.37 E-value=2.7 Score=36.35 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=44.2
Q ss_pred HHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
.+.+...+++|.+ |+..++|..|.+.+..|+.+|.+++++. ++.|++.++.+|++.++
T Consensus 133 ~al~~~~~~~g~~-VlV~GaG~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 133 QAFEKIPLTKQRE-VLIVGFGAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHTTSCCCSCCE-EEEECCSHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHhhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 4456677888877 5555559999999999999999766654 34577788889997766
No 85
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=81.35 E-value=5.3 Score=35.01 Aligned_cols=58 Identities=14% Similarity=0.096 Sum_probs=42.1
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+.++..+++|.+ |+..++|..|.+.+..|+.+|.+++++... +.+++.++.+|++.+.
T Consensus 168 ~l~~~~~~~g~~-VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 168 PLKFSKVTKGTK-VGVAGFGGLGSMAVKYAVAMGAEVSVFARN---EHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHHTTCCTTCE-EEEESCSHHHHHHHHHHHHTTCEEEEECSS---STTHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCE-EEEECCcHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHhcCCCeec
Confidence 334445778877 555567999999999999999976555432 3567778889997666
No 86
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=81.27 E-value=10 Score=32.91 Aligned_cols=56 Identities=23% Similarity=0.303 Sum_probs=39.7
Q ss_pred cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 62 ~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
...+++|.+-+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTI 195 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 556778877555555799999999999999987665543 34566677777876443
No 87
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=81.21 E-value=3 Score=38.06 Aligned_cols=120 Identities=17% Similarity=0.179 Sum_probs=70.9
Q ss_pred CCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCC
Q 023565 63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP 142 (280)
Q Consensus 63 g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 142 (280)
..+++|.+-+|...+|.-|.+++..|+..|.+++++.. ++.+++.++.+|++.+.... + ..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---~~~~~~~~~~lGa~~~i~~~-----~----------~~- 276 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---SAQKEAAVRALGCDLVINRA-----E----------LG- 276 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCCEEEHH-----H----------HT-
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEecc-----c----------cc-
Confidence 56788877555555699999999999999998777763 67888999999997654321 0 00
Q ss_pred CeEEcCCC-CCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEe
Q 023565 143 DGYLLRQF-ENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVE 208 (280)
Q Consensus 143 ~~~~~~~~-~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe 208 (280)
+.... +++.........+..++.+..+..+|.+|-++|+. .+-.+++.+.+.-+++-+-
T Consensus 277 ---~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 277 ---ITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV----TFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp ---CCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH----HHHHHHHHSCTTCEEEESC
T ss_pred ---ccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch----HHHHHHHHHhcCCEEEEEe
Confidence 00000 00000001222334445444444588888887752 2344555566666666553
No 88
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=81.07 E-value=13 Score=32.40 Aligned_cols=51 Identities=33% Similarity=0.373 Sum_probs=37.9
Q ss_pred CCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 67 ~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+|.+-+|...+|.-|.+.+..|+.+|.+++++.. ++.+++.++.+|++.++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi 200 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS---RNETIEWTKKMGADIVL 200 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence 6777555657899999999999999986555432 45778888888886543
No 89
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.88 E-value=12 Score=32.32 Aligned_cols=55 Identities=22% Similarity=0.187 Sum_probs=39.4
Q ss_pred cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 62 ~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
...+++|.+-+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~ 189 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQV 189 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 556778877555555799999999999999987665543 3566666777777544
No 90
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=80.86 E-value=6.8 Score=34.47 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=41.8
Q ss_pred CCCCCC-CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEE
Q 023565 63 GLITPG-KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIIL 120 (280)
Q Consensus 63 g~~~~g-~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~ 120 (280)
+.+++| .+-+|...+|.-|.+.+..|+.+|.++++++..... ..+.+.++.+||+.++
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 467788 774444445999999999999999988777754433 3445666889987544
No 91
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=80.52 E-value=15 Score=32.02 Aligned_cols=57 Identities=28% Similarity=0.417 Sum_probs=41.0
Q ss_pred HcCCCCCC--CeEEEEeCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHH-CCCEEEE
Q 023565 61 DKGLITPG--KTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRA-LGAEIIL 120 (280)
Q Consensus 61 ~~g~~~~g--~~~vv~~SsGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~l~~-~Ga~v~~ 120 (280)
+.+.+++| .+-+|+..+|.-|.+++..++..|. +++++.. ++.+++.++. +|++.+.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAI 212 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 45567787 7756666669999999999999998 6665543 3466777765 8886443
No 92
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=79.94 E-value=9.8 Score=33.70 Aligned_cols=57 Identities=18% Similarity=0.262 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+...+++|.+ |+..+.|..|.+.+..|+.+|.+-++.+.. ++.|++.++.+||+.++
T Consensus 187 ~~~~~~~g~~-VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 187 NTAKVEPGSN-VAIFGLGTVGLAVAEGAKTAGASRIIGIDI--DSKKYETAKKFGVNEFV 243 (378)
T ss_dssp TTTCCCTTCC-EEEECCSHHHHHHHHHHHHHTCSCEEEECS--CTTHHHHHHTTTCCEEE
T ss_pred hhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHcCCcEEE
Confidence 5566788877 555566999999999999999843444432 23677788889986543
No 93
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=79.51 E-value=13 Score=32.44 Aligned_cols=52 Identities=25% Similarity=0.273 Sum_probs=37.4
Q ss_pred CCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 64 ~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
.+++|.+ ++..++|..|.+++..|+..|.+++++.. ++.+++.++.+|++.+
T Consensus 161 ~~~~g~~-VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 161 GAKPGEW-VAIYGIGGLGHVAVQYAKAMGLNVVAVDI---GDEKLELAKELGADLV 212 (339)
T ss_dssp TCCTTCE-EEEECCSTTHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCSEE
T ss_pred CCCCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHCCCCEE
Confidence 4567777 44444477999999999999986555432 4677788888998654
No 94
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=79.41 E-value=13 Score=32.45 Aligned_cols=57 Identities=28% Similarity=0.381 Sum_probs=40.7
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+.+...+ +|.+ |+..+.|.-|.+++..|+.+|. +++++.. ++.+++.++.+|++.++
T Consensus 160 ~l~~~~~-~g~~-VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 160 TVLAGPI-SGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVI 217 (348)
T ss_dssp HHTTSCC-TTCC-EEEECCSHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred HHHhcCC-CCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 3445556 7777 5545559999999999999998 6655443 36778888888986543
No 95
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=79.15 E-value=6.4 Score=34.89 Aligned_cols=54 Identities=26% Similarity=0.265 Sum_probs=40.7
Q ss_pred CCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 65 ~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
+++|.+-+|...+|.-|.+++..|+..|.+++++. . +.+++.++.+|++.++..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~---~~~~~~~~~lGa~~v~~~ 234 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-S---QDASELVRKLGADDVIDY 234 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-C---GGGHHHHHHTTCSEEEET
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-C---hHHHHHHHHcCCCEEEEC
Confidence 67887755555589999999999999998765554 2 356777899999866543
No 96
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=77.91 E-value=18 Score=31.34 Aligned_cols=56 Identities=20% Similarity=0.211 Sum_probs=40.4
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HCCCEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEII 119 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~-~~Ga~v~ 119 (280)
+...+++|.+-+|...+|.-|.+++..++..|.+++++.. ++.+++.++ .+|++.+
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~ 205 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDA 205 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceE
Confidence 4456778877555555699999999999999987555443 356777776 6888544
No 97
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=77.90 E-value=30 Score=28.96 Aligned_cols=29 Identities=28% Similarity=0.326 Sum_probs=19.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLII 97 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~i 97 (280)
.+-+|+..+|--|.++|..-...|.++++
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~ 55 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILI 55 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 35577777788888888776666665443
No 98
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=77.80 E-value=13 Score=32.37 Aligned_cols=54 Identities=26% Similarity=0.300 Sum_probs=39.2
Q ss_pred CCCCCCeEEEEeCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 64 LITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 64 ~~~~g~~~vv~~SsGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
.+++|.+ |+..++|..|.+.+..|+.+ |.+++++. .++.|++.++.+|++.+..
T Consensus 168 ~~~~g~~-vlv~GaG~vG~~a~qla~~~g~~~Vi~~~---~~~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 168 LLGPGST-AVVIGVGGLGHVGIQILRAVSAARVIAVD---LDDDRLALAREVGADAAVK 222 (345)
T ss_dssp GCCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEE---SCHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHcCCCEEEc
Confidence 5677777 55556699999999999988 55555543 2467888889999866543
No 99
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=77.49 E-value=16 Score=31.65 Aligned_cols=60 Identities=17% Similarity=0.208 Sum_probs=38.7
Q ss_pred HHcCCCCCCCeEEEEeCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 60 ~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~-G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.+...+++|.+ ++...+|.-|...+..++.+ |.+++++.. ++.|++..+.+||+.++...
T Consensus 156 l~~~~~~~g~~-VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~Ga~~~i~~~ 216 (348)
T 4eez_A 156 IKVSGVKPGDW-QVIFGAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKIGADVTINSG 216 (348)
T ss_dssp HHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHTTCSEEEEC-
T ss_pred ecccCCCCCCE-EEEEcCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhcCCeEEEeCC
Confidence 44444678877 55556677766666666654 666655543 45788888999997766543
No 100
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=76.93 E-value=11 Score=33.09 Aligned_cols=57 Identities=23% Similarity=0.377 Sum_probs=41.0
Q ss_pred HHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 60 ~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
.+...+++|.+ |+..++|.-|.+.+..|+.+|. +++++.. ++.+++.++.+|++.++
T Consensus 164 l~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 164 CRRGGVTLGHK-VLVCGAGPIGMVTLLVAKAMGAAQVVVTDL---SATRLSKAKEIGADLVL 221 (356)
T ss_dssp HHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 34445678877 5555679999999999999998 4444432 46788888999996443
No 101
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=76.90 E-value=4.9 Score=34.85 Aligned_cols=57 Identities=26% Similarity=0.376 Sum_probs=39.9
Q ss_pred HcCCCCCCC-eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 61 DKGLITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 61 ~~g~~~~g~-~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
++..+++|. +-+|...+|..|.+++..|+.+|.+++++... +.+++.++.+|++.++
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEE
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHcCCcEEE
Confidence 334466765 63444445999999999999999986666544 3466677889987554
No 102
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=76.90 E-value=10 Score=33.87 Aligned_cols=65 Identities=29% Similarity=0.331 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHH-cCC-CCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEE
Q 023565 50 RIAYSMIKDAED-KGL-ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~-~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v 118 (280)
|+..+.+..+.+ .|. --.| ++|+....||-|..+|..++.+|.+++ +.+.+ +.+.+..+.+|++.
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~G-ktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~ 221 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDG-LTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTA 221 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEE
Confidence 466666666543 453 2344 458888999999999999988888776 44432 22233334466654
No 103
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=76.86 E-value=12 Score=33.01 Aligned_cols=56 Identities=23% Similarity=0.219 Sum_probs=39.7
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+...+++|.+ |+..++|.-|.+.+..|+.+|...++.+.. ++.|++.++.+||+.+
T Consensus 185 ~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~v 240 (373)
T 1p0f_A 185 NTAKVTPGST-CAVFGLGGVGFSAIVGCKAAGASRIIGVGT--HKDKFPKAIELGATEC 240 (373)
T ss_dssp TTTCCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHTTCSEE
T ss_pred hccCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEECC--CHHHHHHHHHcCCcEE
Confidence 4556788877 555567999999999999999843443332 3467777888998644
No 104
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=76.27 E-value=12 Score=27.73 Aligned_cols=48 Identities=31% Similarity=0.383 Sum_probs=34.1
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
++..+.|..|.++|......|.+++++-. ++.+.+.++..|.+++..+
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd 56 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIAD 56 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECC
Confidence 77778899999999998888888777653 3455555555565554443
No 105
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=75.24 E-value=30 Score=27.72 Aligned_cols=49 Identities=27% Similarity=0.269 Sum_probs=37.0
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHH-HHCCCEEEEECC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALGAEIILADS 123 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l-~~~Ga~v~~~~~ 123 (280)
++..+.|+.|..+|......|.+++++-. ++.+.+.+ +.+|.+++..+.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l~~~~~~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEFAKKLKATIIHGDG 52 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHSSSEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHHcCCeEEEcCC
Confidence 66777899999999999999999888754 34555554 347888776664
No 106
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=75.23 E-value=25 Score=29.92 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=22.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~iv 98 (280)
..-|||.+++--|+++|..-...|.++++.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~ 59 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFIT 59 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEE
Confidence 355888888888888888777777765544
No 107
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=74.99 E-value=32 Score=27.90 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=19.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~iv 98 (280)
.+-+|+..+|.-|.++|..-...|.+++++
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~ 44 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLL 44 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 345677777777887777766666554443
No 108
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=74.73 E-value=7.9 Score=33.08 Aligned_cols=55 Identities=25% Similarity=0.368 Sum_probs=40.0
Q ss_pred cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 62 ~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
.+ +++|.+-+|...+|..|.+++..|+..|.+++++... +.+++.++.+|++.+.
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~~ 175 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEAA 175 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEEE
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence 55 7888775555556999999999999999876665542 3566667778886543
No 109
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=74.68 E-value=5.1 Score=34.76 Aligned_cols=57 Identities=23% Similarity=0.388 Sum_probs=39.8
Q ss_pred HcCCCCCCC-eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 61 DKGLITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 61 ~~g~~~~g~-~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
++..+++|. +-+|...+|.-|.+++..|+..|.+++++... +.+++.++.+|++.++
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN---REAADYLKQLGASEVI 200 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS---SSTHHHHHHHTCSEEE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCcEEE
Confidence 334466764 64555556999999999999999986666654 2456667778986543
No 110
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=74.15 E-value=10 Score=33.34 Aligned_cols=50 Identities=16% Similarity=0.246 Sum_probs=36.2
Q ss_pred CeEEEEeCCChHHHHH-HHHH-HHcCCc-EEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 69 KTTLIEVTSGNTGVGL-AFIA-AARGYN-LIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 69 ~~~vv~~SsGN~g~al-A~~a-~~~G~~-~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
.+ |+..++|.-|... +..| +.+|.+ ++++.+....+.|++.++.+||+.+
T Consensus 174 ~~-VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SS-AFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CE-EEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CE-EEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 66 5555559999999 8899 999998 6665544322337778889999766
No 111
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=74.08 E-value=37 Score=28.23 Aligned_cols=46 Identities=11% Similarity=0.055 Sum_probs=33.0
Q ss_pred HHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCCC
Q 023565 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPSE 211 (280)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~~ 211 (280)
...+++++ .++||+|||. +..++.|+..++++.+ .++.|+|.+-..
T Consensus 177 ~~~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~~~ 226 (294)
T 3qk7_A 177 AASRLLAL-EVPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYDGLP 226 (294)
T ss_dssp HHHHHHHS-SSCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEETCSC
T ss_pred HHHHHHcC-CCCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeecCcc
Confidence 34445544 3579999975 4677889999999876 368899988543
No 112
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=73.96 E-value=20 Score=30.15 Aligned_cols=54 Identities=13% Similarity=0.035 Sum_probs=39.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|......|.+++++-...........++..|.++..+.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVV 85 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEE
Confidence 456888888999999999999999988777633222344556677788876664
No 113
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=73.54 E-value=23 Score=29.15 Aligned_cols=53 Identities=19% Similarity=0.265 Sum_probs=38.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++.... .......++..|.++..+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~ 57 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-PAPALAEIARHGVKAVHHP 57 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-CHHHHHHHHTTSCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHhcCCceEEEe
Confidence 3558888889999999999999999877654433 3455566677787776664
No 114
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=73.49 E-value=20 Score=31.54 Aligned_cols=56 Identities=18% Similarity=0.243 Sum_probs=39.3
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+...+++|.+ |+..++|.-|.+.+..|+.+|...++.+.. ++.+++.++.+|++.+
T Consensus 186 ~~~~~~~g~~-VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~v 241 (374)
T 1cdo_A 186 NTAKVEPGST-CAVFGLGAVGLAAVMGCHSAGAKRIIAVDL--NPDKFEKAKVFGATDF 241 (374)
T ss_dssp TTTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCCEE
T ss_pred hccCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHHHHHHHHhCCceE
Confidence 4556778877 444557999999999999999843333322 3467777888998644
No 115
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=73.05 E-value=20 Score=31.63 Aligned_cols=56 Identities=25% Similarity=0.251 Sum_probs=39.4
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+...+++|.+ |+...+|.-|.+.+..|+.+|..-++.+.. ++.|++.++.+|++.+
T Consensus 189 ~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~v 244 (376)
T 1e3i_A 189 NTAKVTPGST-CAVFGLGCVGLSAIIGCKIAGASRIIAIDI--NGEKFPKAKALGATDC 244 (376)
T ss_dssp TTSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEE
T ss_pred HhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHhCCcEE
Confidence 4566788877 555557999999999999999843333322 3467777888998644
No 116
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=72.85 E-value=33 Score=28.61 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=21.6
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+-+|+..+|--|+++|..-...|.+++++-
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 58 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIAS 58 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 557888888888888887777776655543
No 117
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=72.66 E-value=11 Score=33.40 Aligned_cols=58 Identities=26% Similarity=0.247 Sum_probs=40.6
Q ss_pred HHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 60 ~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
.++..+++|.+ |+...+|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.++.
T Consensus 187 l~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi~ 244 (369)
T 1uuf_A 187 LRHWQAGPGKK-VGVVGIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVVN 244 (369)
T ss_dssp HHHTTCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEEE
T ss_pred HHhcCCCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEec
Confidence 33335678877 55556688999999999999998555443 345677777899875543
No 118
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=72.53 E-value=23 Score=27.10 Aligned_cols=80 Identities=10% Similarity=0.120 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEec
Q 023565 103 CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGI 182 (280)
Q Consensus 103 ~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~v 182 (280)
........+...|++|++........+......+.+++.+..++..|.+-..........+..++.++. +. |.+|-+.
T Consensus 28 p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVnnA 105 (157)
T 3gxh_A 28 PNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVHCL 105 (157)
T ss_dssp CCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEECS
T ss_pred CCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEECC
Confidence 345666777788888887653211111000112223333344444454322111123344445555555 45 8999888
Q ss_pred CC
Q 023565 183 GT 184 (280)
Q Consensus 183 G~ 184 (280)
|+
T Consensus 106 gg 107 (157)
T 3gxh_A 106 AN 107 (157)
T ss_dssp BS
T ss_pred CC
Confidence 75
No 119
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=71.84 E-value=14 Score=32.41 Aligned_cols=51 Identities=12% Similarity=0.165 Sum_probs=37.4
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 68 g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
|.+-+|.. +|..|.+++..++..|.+++++........+++.++.+|++.+
T Consensus 181 g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 181 CRKVLVVG-TGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp TCEEEEES-CHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 77744544 4999999999999999976666543223367777888999876
No 120
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=71.65 E-value=19 Score=30.30 Aligned_cols=55 Identities=7% Similarity=-0.037 Sum_probs=41.2
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 68 g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
|..-|||.+++--|+++|..-...|.+++++-.........+.++..|.++..+.
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLP 61 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEE
Confidence 3466888888999999999999999988887765555566666777776665543
No 121
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=71.50 E-value=23 Score=31.19 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=38.9
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+...+++|.+ |+..++|.-|.+++..|+.+|...++.+.. ++.+++.++.+|++.+
T Consensus 185 ~~~~~~~g~~-VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~v 240 (374)
T 2jhf_A 185 KVAKVTQGST-CAVFGLGGVGLSVIMGCKAAGAARIIGVDI--NKDKFAKAKEVGATEC 240 (374)
T ss_dssp TTTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEE
T ss_pred hccCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHhCCceE
Confidence 4556778877 444557999999999999999843333332 3466777788888543
No 122
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=71.19 E-value=17 Score=32.01 Aligned_cols=52 Identities=29% Similarity=0.401 Sum_probs=40.2
Q ss_pred EEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 71 TLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
+|+-.+. .|.++|++.+++++|++++++.|+.- ++..+..++ ..|+++..++
T Consensus 157 ~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 157 TLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred EEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 4666666 49999999999999999999999864 333333343 7899998886
No 123
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=70.39 E-value=43 Score=30.09 Aligned_cols=112 Identities=13% Similarity=0.176 Sum_probs=56.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHCC-CEEEEECCCCCHHH--HHHHHHHHHHhCCCeEEcCC--CCCCccHHHHHHhHHHHH
Q 023565 93 YNLIIVMPSTCSMERRIVLRALG-AEIILADSALRFEE--ILEKGEEILKKTPDGYLLRQ--FENPANPKIHYETTGPEI 167 (280)
Q Consensus 93 ~~~~ivvp~~~~~~~~~~l~~~G-a~v~~~~~~~~~~~--~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~g~~t~~~Ei 167 (280)
.|..++.-.+.-...-..++.+| -++.++-+...+.. ..++..+..++.+-.+.+.+ -.||.. ....-+.+.
T Consensus 20 ~p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~---~~v~~~~~~ 96 (407)
T 1vlj_A 20 NPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVL---SKVHEAVEV 96 (407)
T ss_dssp CCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBH---HHHHHHHHH
T ss_pred cCCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCH---HHHHHHHHH
Confidence 45566666665545556667778 56766643222333 35555555555422222211 113322 122233344
Q ss_pred HHhhCCCCCEEEEecCCchhHHHHHHHHHhcC-----------------CCcEEEEEeCCC
Q 023565 168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-----------------PDIKVYGVEPSE 211 (280)
Q Consensus 168 ~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~-----------------p~~~vigVe~~~ 211 (280)
+++. ++| +|+++|||+. .=+++++.... +.+++|.|-+..
T Consensus 97 ~~~~--~~D-~IIavGGGsv-iD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 97 AKKE--KVE-AVLGVGGGSV-VDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp HHHT--TCS-EEEEEESHHH-HHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred HHhc--CCC-EEEEeCChhH-HHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 4443 467 5678887654 34555544421 566788876653
No 124
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=69.91 E-value=41 Score=27.86 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=20.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+-+|+..+|--|+++|......|.+++++-
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 51 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSG 51 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 446777777788888777766666654443
No 125
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=69.78 E-value=9.1 Score=32.95 Aligned_cols=54 Identities=26% Similarity=0.361 Sum_probs=38.8
Q ss_pred CCCCC-eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 65 ITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 65 ~~~g~-~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
++++. +-+|...+|..|.+....|+.+|.+++++... +.|++.++.+|++.++.
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~ 197 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRILS 197 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEEE
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEEe
Confidence 45533 43444445999999999999999987776643 46778888899876543
No 126
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=69.41 E-value=42 Score=27.55 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=40.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|..-...|.+++++-... ........++..|.++..+.
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 62 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARS 62 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 4558888889999999999999999877765432 23445566777788887664
No 127
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=69.31 E-value=17 Score=31.71 Aligned_cols=52 Identities=15% Similarity=0.198 Sum_probs=39.7
Q ss_pred EEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 71 TLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
+|+..+. +|.++|+..+++++|++++++.|++- ++..+..++ ..|+++..+.
T Consensus 150 ~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 150 RLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 4666666 49999999999999999999999874 333333333 7898887775
No 128
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=69.30 E-value=14 Score=32.28 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=41.0
Q ss_pred EEEEeCC---ChHHHHHHHHHHHc-CCcEEEEeCCCC--CHHHHHHHHHCCCEEEEEC
Q 023565 71 TLIEVTS---GNTGVGLAFIAAAR-GYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss---GN~g~alA~~a~~~-G~~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
+|+-.+. +|.++|++.+++++ |++++++.|++- ++.-+..++..|+++..+.
T Consensus 153 kva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 153 KIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred EEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 3666655 58899999999999 999999999853 5566667778899887765
No 129
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=69.27 E-value=7.5 Score=34.01 Aligned_cols=60 Identities=20% Similarity=0.179 Sum_probs=45.4
Q ss_pred HcCCCCCCCeEEEEeCC---ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHHHCCCEEEEEC
Q 023565 61 DKGLITPGKTTLIEVTS---GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~Ss---GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
+.|.+. | .+|+..+. +|.++|++.+++++|++++++.|++- ++.....++..|+++..+.
T Consensus 149 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 149 EFGRID-G-LKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT 213 (308)
T ss_dssp HSSCSS-S-EEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HhCCCC-C-eEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc
Confidence 345433 2 44766666 58999999999999999999999864 4445667778899887765
No 130
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=68.98 E-value=50 Score=27.55 Aligned_cols=25 Identities=24% Similarity=0.391 Sum_probs=18.3
Q ss_pred HhHHHHHHHhhCCCCCEEEEecCCch
Q 023565 161 ETTGPEIWQDSGGKVDAFISGIGTGG 186 (280)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~vv~~vG~Gg 186 (280)
..+..++.++. +.+|.+|..+|..+
T Consensus 79 ~~~~~~~~~~~-g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 79 SSLADFIKTHF-GKLDILVNNAGVAG 103 (311)
T ss_dssp HHHHHHHHHHH-SSCCEEEECCCCCS
T ss_pred HHHHHHHHHhC-CCCCEEEECCcccc
Confidence 44555666666 57999999998763
No 131
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=68.97 E-value=33 Score=29.81 Aligned_cols=60 Identities=23% Similarity=0.174 Sum_probs=42.0
Q ss_pred cCCCCCCCeEEEEeC-CChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 62 KGLITPGKTTLIEVT-SGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 62 ~g~~~~g~~~vv~~S-sGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
.|.+.+|-+ |+..+ .+|.++|++.+++++|++++++.|++- ++.-+..++ ..|+.+..+.
T Consensus 140 ~g~l~~gl~-va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 206 (307)
T 3tpf_A 140 NKMQNGIAK-VAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY 206 (307)
T ss_dssp TCCGGGCCE-EEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred hCCCCCCCE-EEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 454443444 44433 389999999999999999999999864 333333333 6788888776
No 132
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=68.87 E-value=20 Score=31.52 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=38.3
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+...+++|.+ |+..++|.-|...+..|+.+|...++.+.. ++.+++.++.+|++.+
T Consensus 184 ~~~~~~~g~~-VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~v 239 (373)
T 2fzw_A 184 NTAKLEPGSV-CAVFGLGGVGLAVIMGCKVAGASRIIGVDI--NKDKFARAKEFGATEC 239 (373)
T ss_dssp TTTCCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHHTCSEE
T ss_pred hhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHcCCceE
Confidence 4556778877 444557999999999999999843333322 3456677778888543
No 133
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=68.86 E-value=13 Score=32.63 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=39.8
Q ss_pred EEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 71 TLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
+|+..+. +|.++|++.+++++|++++++.|++- ++..+..++ ..|+++..++
T Consensus 169 ~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 228 (325)
T 1vlv_A 169 KVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS 228 (325)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred EEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 3666666 59999999999999999999999864 333334343 7899988876
No 134
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=68.61 E-value=14 Score=32.48 Aligned_cols=58 Identities=22% Similarity=0.213 Sum_probs=40.0
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+..+..+++|.+ |+..+.|.-|..++..|+.+|.+++++... +.+++.++.+|++.++
T Consensus 171 ~l~~~~~~~g~~-VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 171 PLVRNGCGPGKK-VGIVGLGGIGSMGTLISKAMGAETYVISRS---SRKREDAMKMGADHYI 228 (360)
T ss_dssp HHHHTTCSTTCE-EEEECCSHHHHHHHHHHHHHTCEEEEEESS---STTHHHHHHHTCSEEE
T ss_pred HHHHcCCCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHcCCCEEE
Confidence 333455678877 555555999999999999999985555433 2456666778886544
No 135
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=68.53 E-value=52 Score=27.58 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=19.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLII 97 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~i 97 (280)
.+-+||..+|--|.++|..-...|.++++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~ 37 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVV 37 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 34567777777788877776666665443
No 136
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=68.51 E-value=38 Score=27.24 Aligned_cols=30 Identities=27% Similarity=0.306 Sum_probs=22.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+-+|+..+|.-|.++|......|.+++++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~ 33 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGA 33 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 457888888888888888877777755544
No 137
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=67.34 E-value=40 Score=29.03 Aligned_cols=105 Identities=21% Similarity=0.206 Sum_probs=66.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|...+-|+.|.++|..++.+|++++++-+.. .. .....+|++.. +.+ ++.++. +...++-
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~~------~l~-------ell~~a-DvV~l~~ 204 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKFV------DLE-------TLLKES-DVVTIHV 204 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEEC------CHH-------HHHHHC-SEEEECC
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCcccc------CHH-------HHHhhC-CEEEEec
Confidence 347778889999999999999999877665543 22 23456787532 122 233344 4555443
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHH--HHHHHHHhc
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT--GAGRFLKEN 198 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~--Gi~~~~k~~ 198 (280)
..++... ..+..+.++++ +++.+++-+|+|+..- .+..++++.
T Consensus 205 p~~~~t~----~li~~~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 205 PLVESTY----HLINEERLKLM--KKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp CCSTTTT----TCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred CCChHHh----hhcCHHHHhcC--CCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 2233211 12334667777 4688999999998744 667777664
No 138
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=67.17 E-value=18 Score=32.00 Aligned_cols=52 Identities=23% Similarity=0.300 Sum_probs=40.1
Q ss_pred EEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 71 TLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
+|+-.+. .|.++|+..+++++|++++++.|+.- ++..+..++ ..|+++..++
T Consensus 157 ~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (335)
T 1dxh_A 157 SYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTE 216 (335)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4666666 49999999999999999999999864 333334343 7899988876
No 139
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=66.54 E-value=39 Score=30.80 Aligned_cols=80 Identities=16% Similarity=0.109 Sum_probs=50.7
Q ss_pred CCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEEeCCChHHHHHHHHHHH-cCCcEEEEeCCCCC-H------------
Q 023565 41 MEPCSSVKDRIAYSMIKDAEDKGLIT-PGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCS-M------------ 105 (280)
Q Consensus 41 ~~ptGS~K~R~a~~~l~~a~~~g~~~-~g~~~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~~~~-~------------ 105 (280)
.+|.|.++. ....+....+++.+. .+..-+||.+|+--|+|+|...+. .|.+++++--+... .
T Consensus 35 a~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~ 112 (422)
T 3s8m_A 35 THPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSA 112 (422)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHH
T ss_pred CCchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhH
Confidence 446565442 223455556677663 345567888888889999999888 99988876533211 1
Q ss_pred HHHHHHHHCCCEEEEEC
Q 023565 106 ERRIVLRALGAEIILAD 122 (280)
Q Consensus 106 ~~~~~l~~~Ga~v~~~~ 122 (280)
...+.++..|.++..+.
T Consensus 113 a~~~~~~~~G~~a~~i~ 129 (422)
T 3s8m_A 113 AFDKHAKAAGLYSKSIN 129 (422)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhcCCcEEEEE
Confidence 12356678888776554
No 140
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=66.44 E-value=52 Score=26.87 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=21.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~iv 98 (280)
.+-+|+..+|--|.++|..-...|.+++++
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~ 42 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILL 42 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 355777777888888887776666665544
No 141
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=66.20 E-value=45 Score=27.84 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=25.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
.+-+||..+|--|.++|..-...|.+++++-
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 4568888888899999998888888877663
No 142
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=65.99 E-value=51 Score=27.36 Aligned_cols=54 Identities=26% Similarity=0.278 Sum_probs=39.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC--------CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--------SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~--------~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|..-...|.+++++-.... -......++..|.++..+.
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALK 68 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEe
Confidence 45688888899999999999999998777764432 1344555667788887665
No 143
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=65.83 E-value=50 Score=27.69 Aligned_cols=29 Identities=28% Similarity=0.486 Sum_probs=18.5
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~iv 98 (280)
+-+|+..+|--|.++|......|.+++++
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~ 63 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVIT 63 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 44667667777777777666666554443
No 144
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=64.55 E-value=54 Score=28.60 Aligned_cols=54 Identities=22% Similarity=0.258 Sum_probs=40.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--------HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--------MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--------~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|......|.+++++.....+ ......++..|.++..+.
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~ 107 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEE
Confidence 455888888999999999999999988777654332 245667788898887764
No 145
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=64.23 E-value=66 Score=27.74 Aligned_cols=104 Identities=19% Similarity=0.166 Sum_probs=64.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.++...+-|+.|.++|..++.+|++++++-+.. ... ..+.+|++. + +.+ +++++. +...++-
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~-------ell~~a-DvVvl~~ 204 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILD-IRE---KAEKINAKA--V----SLE-------ELLKNS-DVISLHV 204 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSC-CHH---HHHHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCc-chh---HHHhcCcee--c----CHH-------HHHhhC-CEEEEec
Confidence 347778889999999999999999887665443 222 246688763 1 222 233344 4554433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT--GAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~--Gi~~~~k~ 197 (280)
-.++... ..+..+.++++ +++.+++-+++|+..- .+..++++
T Consensus 205 P~~~~t~----~li~~~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 205 TVSKDAK----PIIDYPQFELM--KDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp CCCTTSC----CSBCHHHHHHS--CTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred cCChHHH----HhhCHHHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 2233221 11224566777 4689999999998765 55666654
No 146
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=63.65 E-value=20 Score=31.38 Aligned_cols=59 Identities=19% Similarity=0.253 Sum_probs=42.5
Q ss_pred cCCCCCCCeEEEEeCC-ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 62 KGLITPGKTTLIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 62 ~g~~~~g~~~vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
.|.+. |-+ |+..+. +|.++|++.+++++|++++++.|++- ++..+..++ ..|+++..++
T Consensus 150 ~g~l~-gl~-va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 150 KGTIK-GVK-VVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp HSCCT-TCE-EEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred hCCcC-CcE-EEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 45433 333 555554 89999999999999999999999875 333333343 7899988776
No 147
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=63.57 E-value=71 Score=27.39 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=68.5
Q ss_pred EEEeCCChHHHHHHHHHHHcC----CcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEc
Q 023565 72 LIEVTSGNTGVGLAFIAAARG----YNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLL 147 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G----~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 147 (280)
|...+.||.|.++|..-...| .+++++-+. ....+.+.++.+|.++. . +.. +.+++- +.+++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~-~~~~~~~~l~~~G~~~~--~---~~~-------e~~~~a-DvVil 90 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD-MDLATVSALRKMGVKLT--P---HNK-------ETVQHS-DVLFL 90 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC-TTSHHHHHHHHHTCEEE--S---CHH-------HHHHHC-SEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC-ccHHHHHHHHHcCCEEe--C---ChH-------HHhccC-CEEEE
Confidence 777788999999999998888 566655332 22135556667787642 2 121 122333 45554
Q ss_pred CCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCC
Q 023565 148 RQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSES 212 (280)
Q Consensus 148 ~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~ 212 (280)
.-- |. ....+..+|...+ .++.+|+.+.+|-...-+...+.+..+..+++..-|...
T Consensus 91 av~--~~----~~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p 147 (322)
T 2izz_A 91 AVK--PH----IIPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTP 147 (322)
T ss_dssp CSC--GG----GHHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGG
T ss_pred EeC--HH----HHHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcH
Confidence 221 11 1223333443333 357788887766555545555555556678888877443
No 148
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=63.41 E-value=64 Score=26.83 Aligned_cols=156 Identities=9% Similarity=0.039 Sum_probs=79.4
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCeEEEEeCC-ChHHH--HHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 47 VKDRIAYSMIKDAEDKGLITPGKTTLIEVTS-GNTGV--GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 47 ~K~R~a~~~l~~a~~~g~~~~g~~~vv~~Ss-GN~g~--alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
|=.+....+-..+.+.|. . ++...+ .+... .+-......++..+|++|...+...+..++..|--|+.++.
T Consensus 41 ~~~~~~~gi~~~a~~~g~-----~-~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~ 114 (305)
T 3huu_A 41 FNSDVLNGINQACNVRGY-----S-TRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGK 114 (305)
T ss_dssp HHHHHHHHHHHHHHHHTC-----E-EEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHHHHHHHCCC-----E-EEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECC
Confidence 444444444455666664 3 444443 33322 22223344678888888765555666777777888877764
Q ss_pred CC----------CHHHHHHHH-HHHHHhCC-CeEEcCCCCCCccH---HHHHHhH------------------HHHHHHh
Q 023565 124 AL----------RFEEILEKG-EEILKKTP-DGYLLRQFENPANP---KIHYETT------------------GPEIWQD 170 (280)
Q Consensus 124 ~~----------~~~~~~~~a-~~~~~~~~-~~~~~~~~~~~~~~---~~g~~t~------------------~~Ei~~q 170 (280)
.. +..+....+ +.+.+... ...|+....+.... ..||... +.+.+++
T Consensus 115 ~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 194 (305)
T 3huu_A 115 SLNYENIIHIDNDNIDAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVKISNDCVVIKSMNDLRDFIKQ 194 (305)
T ss_dssp CCSSTTCCEEECCHHHHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHHHC--
T ss_pred CCcccCCcEEEeCHHHHHHHHHHHHHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcCCCcccEEecCcHHHHHHHHH
Confidence 21 122233333 33333221 22333221111110 1233221 3333333
Q ss_pred h----CCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCC
Q 023565 171 S----GGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPS 210 (280)
Q Consensus 171 ~----~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~ 210 (280)
+ .++||+|||. +..++.|+..++++.+ .++.|+|.+-.
T Consensus 195 ~~l~~~~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~di~vig~D~~ 240 (305)
T 3huu_A 195 YCIDASHMPSVIITS--DVMLNMQLLNVLYEYQLRIPEDIQTATFNTS 240 (305)
T ss_dssp ------CCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESCS
T ss_pred hhhcCCCCCCEEEEC--ChHHHHHHHHHHHHcCCCCCcceEEEEECCc
Confidence 3 3578998874 5667789999999876 35788888753
No 149
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=63.24 E-value=59 Score=26.31 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=34.3
Q ss_pred hHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC---CCcEEEEEeCC
Q 023565 162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN---PDIKVYGVEPS 210 (280)
Q Consensus 162 t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~---p~~~vigVe~~ 210 (280)
....+++++-+.+||+||+. +...+.|+..++++.+ .++.|+|.+-.
T Consensus 168 ~~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~~ 217 (272)
T 3o74_A 168 RLMQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGDN 217 (272)
T ss_dssp HHHHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESCC
T ss_pred HHHHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCCh
Confidence 34556666652269999885 4677889999999887 46889998754
No 150
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=63.22 E-value=14 Score=32.92 Aligned_cols=52 Identities=27% Similarity=0.382 Sum_probs=39.7
Q ss_pred EEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 71 TLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
+|+..+. +|.+.|++.+++++|++++++.|+.- ++..+..++ ..|+++..+.
T Consensus 178 ~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 178 TLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3666666 49999999999999999999999864 333333333 6898888776
No 151
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=63.15 E-value=53 Score=26.72 Aligned_cols=53 Identities=21% Similarity=0.256 Sum_probs=37.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++.... .......++..|.++..+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~ 60 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVP-APEAEAAIRNLGRRVLTVK 60 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHHhcCCcEEEEE
Confidence 3558888889999999999999999877765432 1222225666787765554
No 152
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=62.80 E-value=32 Score=30.47 Aligned_cols=106 Identities=18% Similarity=0.110 Sum_probs=66.6
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|...+-|+.|.++|..++.+|++++++-+. .+.......|++. ++ +.++ ++++. +...++-
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~e-------ll~~a-DiV~l~~ 223 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKDA-------LFEQS-DVLSVHL 223 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHHH-------HHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHHH-------HHhhC-CEEEEec
Confidence 35778888999999999999999998777543 2344556678752 22 2322 33444 4554433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHhc
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKEN 198 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~~ 198 (280)
-.++.+- ..+..+.++++ +++.+++-+|.|+.. ..+..++++.
T Consensus 224 Plt~~t~----~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g 268 (352)
T 3gg9_A 224 RLNDETR----SIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNRG 268 (352)
T ss_dssp CCSTTTT----TCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHHT
T ss_pred cCcHHHH----HhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHhC
Confidence 2233221 12344666777 578999999998864 3556666653
No 153
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=62.57 E-value=45 Score=30.67 Aligned_cols=50 Identities=12% Similarity=-0.111 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 50 RIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 50 R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+|..+.+..+.+........++++....||-|..+|.....+|.+++.+.
T Consensus 216 ~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 216 YGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp HHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEe
Confidence 56667776665432233334569999999999999999999998887655
No 154
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=62.38 E-value=40 Score=27.78 Aligned_cols=54 Identities=15% Similarity=0.228 Sum_probs=38.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|+++|..-...|.+++++...... ......++..|.++..+.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIK 64 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 456888888999999999999999998877554432 233555666776665543
No 155
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=62.04 E-value=20 Score=31.25 Aligned_cols=52 Identities=19% Similarity=0.128 Sum_probs=40.4
Q ss_pred EEEEeCC---ChHHHHHHHHHHHc-CCcEEEEeCCCC--CHHHHHHHHHCCCEEEEEC
Q 023565 71 TLIEVTS---GNTGVGLAFIAAAR-GYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss---GN~g~alA~~a~~~-G~~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
+|+..+. +|.+++++.++.++ |++++++.|++- ++..+..++..|+++..++
T Consensus 156 ~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 156 HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred EEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 3666666 58999999999999 999999999864 4445566778888876654
No 156
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=62.00 E-value=66 Score=26.53 Aligned_cols=37 Identities=24% Similarity=0.265 Sum_probs=28.9
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCCC
Q 023565 173 GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPSE 211 (280)
Q Consensus 173 ~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~~ 211 (280)
++||+|||. +..++.|+..++++.+ .++.|+|.+...
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~~ 224 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDSR 224 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCHH
Confidence 578999876 4567789999999876 368899998653
No 157
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=61.93 E-value=25 Score=30.69 Aligned_cols=55 Identities=25% Similarity=0.208 Sum_probs=38.2
Q ss_pred CCCC-CCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HCCCEEEEE
Q 023565 63 GLIT-PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIILA 121 (280)
Q Consensus 63 g~~~-~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~-~~Ga~v~~~ 121 (280)
..+. +|.+-+| .++|.-|...+..|+.+|.+++++... +.+++.++ .+|++.++.
T Consensus 175 ~~~~~~g~~VlV-~GaG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi~ 231 (357)
T 2cf5_A 175 FGLKQPGLRGGI-LGLGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYVI 231 (357)
T ss_dssp TSTTSTTCEEEE-ECCSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEEE
T ss_pred cCCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceeec
Confidence 3455 7777444 457999999999999999876655543 35666666 899865443
No 158
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=61.92 E-value=23 Score=30.75 Aligned_cols=51 Identities=20% Similarity=0.138 Sum_probs=36.7
Q ss_pred CCCCCCeEEEEeCCChHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 64 LITPGKTTLIEVTSGNTGVGLAFIAAAR--GYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 64 ~~~~g~~~vv~~SsGN~g~alA~~a~~~--G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
.+ +|.+ |+..++|.-|.+.+..|+.+ |.+++++.+ ++.+++.++.+||+.+
T Consensus 168 ~~-~g~~-VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v 220 (344)
T 2h6e_A 168 KF-AEPV-VIVNGIGGLAVYTIQILKALMKNITIVGISR---SKKHRDFALELGADYV 220 (344)
T ss_dssp TC-SSCE-EEEECCSHHHHHHHHHHHHHCTTCEEEEECS---CHHHHHHHHHHTCSEE
T ss_pred CC-CCCE-EEEECCCHHHHHHHHHHHHhcCCCEEEEEeC---CHHHHHHHHHhCCCEE
Confidence 34 7777 55555599999999999999 987444332 4577888888898644
No 159
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=61.60 E-value=67 Score=26.43 Aligned_cols=31 Identities=10% Similarity=0.131 Sum_probs=22.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
..-+|+..+|--|+++|..-...|.+++++-
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 39 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCA 39 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3557787778888888887777777655543
No 160
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=61.16 E-value=56 Score=27.13 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=39.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+||..+|--|+++|......|.++++....... ......++..|.++..+.
T Consensus 29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 55888888999999999999999998876544332 234455677788776654
No 161
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=61.16 E-value=9.2 Score=30.40 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=26.7
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
|+...+|-.|.++|+..++.|++++|+=-
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 88899999999999999999999999853
No 162
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=61.13 E-value=62 Score=26.12 Aligned_cols=54 Identities=22% Similarity=0.180 Sum_probs=38.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC-CCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS-TCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~-~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|..-...|.+++++... ... ......++..|.++..+.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 63 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEE
Confidence 355788888999999999999999998777654 222 233455666787776654
No 163
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=60.85 E-value=24 Score=31.51 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHcCCcEEEEeCC-CC--CHHHHHHHH----HCCCEEEEEC
Q 023565 79 NTGVGLAFIAAARGYNLIIVMPS-TC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 79 N~g~alA~~a~~~G~~~~ivvp~-~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
|.+++++.++.++|++++++.|+ +- ++.-+..++ ..|+.+..+.
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 257 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred chHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999998 53 333333333 6799888776
No 164
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=60.53 E-value=65 Score=27.24 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=31.5
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
++...+.|+.|+++|..++.+|.+++++-+. +.+...++.+|++++
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEPF 202 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEEE
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCeec
Confidence 4777778888888888888888876655443 234444556777643
No 165
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=60.34 E-value=22 Score=31.53 Aligned_cols=51 Identities=24% Similarity=0.242 Sum_probs=37.9
Q ss_pred EEEeCC-ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHH----HHCCCEEEEEC
Q 023565 72 LIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVL----RALGAEIILAD 122 (280)
Q Consensus 72 vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l----~~~Ga~v~~~~ 122 (280)
|+..+. +|.+++++.+++++|++++++.|++- ++.-+..+ +..|+++..+.
T Consensus 182 va~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 182 LAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp EEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred EEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 444433 89999999999999999999999864 33333333 36798888776
No 166
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=60.15 E-value=57 Score=26.50 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=34.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCc-EEEEeCCCCCHHHHHHHHHC--CCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTCSMERRIVLRAL--GAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~-~~ivvp~~~~~~~~~~l~~~--Ga~v~~~~ 122 (280)
.+.+|+..+|--|.++|......|.+ ++++- .+........++.. +.++..+.
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~-r~~~~~~~~~l~~~~~~~~~~~~~ 61 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAINPKVNITFHT 61 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SSCCHHHHHHHHHHCTTSEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEe-cCchHHHHHHHHHhCCCceEEEEE
Confidence 35588888899999999999999997 55443 33333444444433 55665443
No 167
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=60.01 E-value=39 Score=28.20 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=37.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|--|+++|......|.+++++...... ......++..|.++..+.
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEE
Confidence 55888888999999999999999987776544321 222455667787776554
No 168
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=59.93 E-value=38 Score=27.76 Aligned_cols=53 Identities=13% Similarity=0.230 Sum_probs=36.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC---HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS---MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~---~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|.-|+++|......|.+++++...... ......++..|.++..+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVG 59 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 45888888999999999998899987776543221 122344555677665554
No 169
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=59.90 E-value=44 Score=28.15 Aligned_cols=54 Identities=20% Similarity=0.239 Sum_probs=38.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|.++|......|.+++++..... .......++..|.++..+.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 103 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE
Confidence 35588888899999999999999998777654432 1223445667788876664
No 170
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=59.88 E-value=60 Score=26.81 Aligned_cols=68 Identities=21% Similarity=0.168 Sum_probs=45.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHh
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKK 140 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~ 140 (280)
+-+|+..+|--|+++|..-...|.+++++-.... .....++..++..+.+|-+ +.++..+...+..++
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 96 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEH--ASVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQ 96 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC--HHHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHh
Confidence 4488888899999999999999999777665432 2245556667887777753 334444444444444
No 171
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=59.65 E-value=53 Score=26.64 Aligned_cols=54 Identities=17% Similarity=0.140 Sum_probs=38.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|..-...|.+++++-.... .......++..+.++..+.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 64 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVA 64 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 45588888899999999999999998776654321 1223445566788887665
No 172
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=59.48 E-value=75 Score=26.29 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=24.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
..-+||..+|--|.++|..-...|.+++++-
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEe
Confidence 4557888888889999888888888777664
No 173
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=59.44 E-value=45 Score=27.64 Aligned_cols=54 Identities=17% Similarity=0.265 Sum_probs=38.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|..-...|.++++....... ......++..|.++..+.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 455788888899999999999999988876544322 233556677888776664
No 174
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=59.41 E-value=50 Score=27.59 Aligned_cols=54 Identities=17% Similarity=0.163 Sum_probs=38.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++-... ........++..|.++..+.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 4568888889999999999999999887776542 23344556677776665543
No 175
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=59.29 E-value=16 Score=30.53 Aligned_cols=58 Identities=12% Similarity=0.149 Sum_probs=36.9
Q ss_pred CChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhC
Q 023565 77 SGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKT 141 (280)
Q Consensus 77 sGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (280)
||-.|.++|.++...|..++++..+...... ...|.+++.+. +..+..+.+.+.....
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~----~~~~~~~~~v~---s~~em~~~v~~~~~~~ 85 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTKRALKPE----PHPNLSIREIT---NTKDLLIEMQERVQDY 85 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECTTSCCCC----CCTTEEEEECC---SHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCcccccc----CCCCeEEEEHh---HHHHHHHHHHHhcCCC
Confidence 8999999999999999999998754321100 01255555554 3455555555554443
No 176
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=59.26 E-value=27 Score=30.35 Aligned_cols=56 Identities=11% Similarity=0.181 Sum_probs=38.5
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcC-CcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+.+.+++|.+-+|...+|..|.+.+..|+..| .+++.+. +..+.+.++ +|++.++.
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 45677888874555555999999999999885 4444433 235667777 88876554
No 177
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=59.17 E-value=78 Score=26.40 Aligned_cols=29 Identities=24% Similarity=0.391 Sum_probs=21.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~iv 98 (280)
+-+||..+|--|+++|......|.+++++
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 45788888888888888877777765543
No 178
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=59.15 E-value=39 Score=23.48 Aligned_cols=48 Identities=19% Similarity=0.295 Sum_probs=33.7
Q ss_pred EEEeCCChHHHHHHHHHHHcC-CcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 72 LIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
++..++|..|.+++......| .+++++-. ++.+...++..|.+++..+
T Consensus 8 v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d 56 (118)
T 3ic5_A 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVD 56 (118)
T ss_dssp EEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECC
T ss_pred EEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEec
Confidence 555556999999999999999 66555543 3456666666677766555
No 179
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=59.04 E-value=37 Score=29.72 Aligned_cols=51 Identities=22% Similarity=0.249 Sum_probs=35.8
Q ss_pred CCCeEEEEeCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 67 PGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 67 ~g~~~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+|.+-+|...+|..|.+.+..|+. .|.+++++.. ++.|++.++.+|++.++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~lGad~vi 222 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSLGAHHVI 222 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 666644444489999999999987 4776655543 35677888888886544
No 180
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=59.02 E-value=84 Score=26.74 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=33.7
Q ss_pred HHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCCC
Q 023565 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPSE 211 (280)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~~ 211 (280)
...+++++- +++|+|++. +...+.|+..++++.+ .++.|+|++-..
T Consensus 195 ~~~~~L~~~-~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~~~ 244 (350)
T 3h75_A 195 QAQQLLKRY-PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNSSP 244 (350)
T ss_dssp HHHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESCCH
T ss_pred HHHHHHHhC-CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCCCH
Confidence 455666554 678988875 4567779999999876 258999998643
No 181
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=58.82 E-value=55 Score=26.80 Aligned_cols=54 Identities=17% Similarity=0.089 Sum_probs=37.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++...... ......++..|.++..+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 64 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 456888888999999999999999987776543211 122344556687776554
No 182
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=58.76 E-value=30 Score=29.68 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=35.9
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.++..++|..+..++..+- ..-.-.|+++...-......++..|++++.++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 4777777777777776665 33334566666665666666899999999998
No 183
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=58.39 E-value=44 Score=27.85 Aligned_cols=69 Identities=22% Similarity=0.083 Sum_probs=42.4
Q ss_pred eEEEEeCCCh--HHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCC--EEEEECCCCCHHHHHHHHHHHHHh
Q 023565 70 TTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA--EIILADSALRFEEILEKGEEILKK 140 (280)
Q Consensus 70 ~~vv~~SsGN--~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga--~v~~~~~~~~~~~~~~~a~~~~~~ 140 (280)
+-+|+..+|+ -|.++|..-...|.+++++-... ...+++.+...+. .++.+|-+ +.++..+...+..++
T Consensus 28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVI-SDQEIKDLFVELGKV 100 (280)
T ss_dssp EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeecC-CHHHHHHHHHHHHHH
Confidence 4466666677 89999999999999877766554 5566666654433 44444432 333444444444444
No 184
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=57.80 E-value=49 Score=27.26 Aligned_cols=54 Identities=24% Similarity=0.405 Sum_probs=38.3
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|+++|..-...|.++++....+.. ......++..|.++..+.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 355788888999999999999999998886544322 233455666787776654
No 185
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=57.66 E-value=56 Score=28.12 Aligned_cols=49 Identities=8% Similarity=0.075 Sum_probs=35.6
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
+++.++.|..|..+|......|. + +++..+ +++.+ ++..|..++.-+..
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v-~vid~~--~~~~~-~~~~~~~~i~gd~~ 165 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-F-VLAEDE--NVRKK-VLRSGANFVHGDPT 165 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-E-EEESCG--GGHHH-HHHTTCEEEESCTT
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-E-EEEeCC--hhhhh-HHhCCcEEEEeCCC
Confidence 48888899999999988888887 4 444432 34555 67788888777653
No 186
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=57.53 E-value=32 Score=28.24 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=43.8
Q ss_pred CeEEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHH-HHCC-CEEEEECCCCCHHHHHHHHHHHHHhC
Q 023565 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALG-AEIILADSALRFEEILEKGEEILKKT 141 (280)
Q Consensus 69 ~~~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l-~~~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (280)
.+-+|+..+ |.-|+++|......|.+++++........+++.+ +.+| ..++.+|-+ +.++..+...+..++.
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVA-DDAQIDALFASLKTHW 90 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 455777755 7899999999999999888876554444555555 3344 234444432 3344444444444443
No 187
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=57.52 E-value=74 Score=25.67 Aligned_cols=54 Identities=19% Similarity=0.119 Sum_probs=39.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|..-...|.++++....... ......++..|.++..+.
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEe
Confidence 355777777888999999999999988876554433 234556677888887664
No 188
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=57.25 E-value=73 Score=25.52 Aligned_cols=54 Identities=19% Similarity=0.306 Sum_probs=37.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|......|.+++++...+.. ......++..|.++..+.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 61 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEE
Confidence 355888888999999999999999988776433322 223445566777766554
No 189
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=57.07 E-value=39 Score=29.58 Aligned_cols=53 Identities=26% Similarity=0.285 Sum_probs=36.3
Q ss_pred CCC-CCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HCCCEEEE
Q 023565 64 LIT-PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIIL 120 (280)
Q Consensus 64 ~~~-~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~-~~Ga~v~~ 120 (280)
.+. +|.+-+| ..+|.-|.+++..|+.+|.+++++... +.+++.++ .+|++.+.
T Consensus 183 ~~~~~g~~VlV-~GaG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 183 GLDEPGKHIGI-VGLGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSFL 237 (366)
T ss_dssp TCCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEEE
T ss_pred CcCCCCCEEEE-ECCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceEE
Confidence 345 7777445 557999999999999999876555433 24555544 88986544
No 190
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=56.99 E-value=45 Score=28.13 Aligned_cols=54 Identities=17% Similarity=0.096 Sum_probs=39.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEECC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS 123 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~~ 123 (280)
+-+|+..+|+.|.+++......|.+++++..... ....+..++..|.+++..|-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl 67 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL 67 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence 3477778899999999999889999888876543 33334445566777776653
No 191
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=56.91 E-value=86 Score=29.19 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=70.4
Q ss_pred HHHHHHHcCCcEEE---------EeCCCCCH--HHHHHHHHCCCEEEEECCC---CCHH-HHHHHHHHHHHhCCCeE-Ec
Q 023565 84 LAFIAAARGYNLII---------VMPSTCSM--ERRIVLRALGAEIILADSA---LRFE-EILEKGEEILKKTPDGY-LL 147 (280)
Q Consensus 84 lA~~a~~~G~~~~i---------vvp~~~~~--~~~~~l~~~Ga~v~~~~~~---~~~~-~~~~~a~~~~~~~~~~~-~~ 147 (280)
+..+|+..|.++++ .-|..+.. ......-..|++.+..... +.|. ++.+.-.+.+++-...+ |.
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 55778999999774 23333322 2344445579999888643 2232 45444444333221211 11
Q ss_pred ---C---C-CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCc
Q 023565 148 ---R---Q-FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESA 213 (280)
Q Consensus 148 ---~---~-~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~ 213 (280)
. . ...+......-...+.++.+++ +..+||+.+-+|.++ +.+....|.++|+++.+....
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~--~a~aIv~~T~sG~ta----~~isr~RP~~pI~a~t~~~~~ 429 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQ--KAKAIIVLSTSGTTP----RLVSKYRPNCPIILVTRCPRA 429 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHH--TCSCEEEECSSSHHH----HHHHHTCCSSCEEEEESCTTH
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhc--CCCEEEEECCCchHH----HHHHhhCCCCCEEEEcCCHHH
Confidence 0 0 0111222222334455777777 356899999999885 445566899999999987653
No 192
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=56.87 E-value=19 Score=32.45 Aligned_cols=47 Identities=17% Similarity=0.228 Sum_probs=34.7
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~ 120 (280)
+|+..+.|+.|.+++..++.+|.+++++ .. .+.+.+.++.+|++.+.
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~v~-D~--~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 174 KVMVIGAGVAGLAAIGAANSLGAIVRAF-DT--RPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE-CS--CGGGHHHHHHTTCEECC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEE-cC--CHHHHHHHHHcCCEEEE
Confidence 4888889999999999999999864443 32 23455556778998653
No 193
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=56.86 E-value=48 Score=26.90 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=37.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++...... ....+.++..|.++..+.
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 68 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVV 68 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 355888888999999999999999987776543211 123345566676665543
No 194
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=56.75 E-value=47 Score=30.96 Aligned_cols=59 Identities=15% Similarity=0.083 Sum_probs=42.8
Q ss_pred CCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEe-CCCC---------------CHHHHHHHHHCCCEEEEECC
Q 023565 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-PSTC---------------SMERRIVLRALGAEIILADS 123 (280)
Q Consensus 65 ~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv-p~~~---------------~~~~~~~l~~~Ga~v~~~~~ 123 (280)
++++.+-+||..+|--|.++|..-...|.+.++++ ..+. .......++..|+++..+..
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 322 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTC 322 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEEC
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEEC
Confidence 45556768888889999999988888899866666 4432 23456667788999877653
No 195
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=56.47 E-value=54 Score=26.96 Aligned_cols=54 Identities=13% Similarity=0.109 Sum_probs=37.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|......|.+++++-..... ......++..|.++..+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEE
Confidence 355778888889999999988999987666443211 223445566788876664
No 196
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=56.41 E-value=81 Score=25.73 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=21.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
.+-+|+..+|--|.++|......|.+++++-
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 38 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIA 38 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 3557788888888888887777776655543
No 197
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=56.39 E-value=1.1e+02 Score=27.50 Aligned_cols=100 Identities=16% Similarity=0.031 Sum_probs=58.6
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEEeCCChHHHHHHHHHHH-cCCcEEEEeCCCCC-------------
Q 023565 40 TMEPCSSVKDRIAYSMIKDAEDKGLI-TPGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCS------------- 104 (280)
Q Consensus 40 ~~~ptGS~K~R~a~~~l~~a~~~g~~-~~g~~~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~~~~------------- 104 (280)
+.+|.|.-+. ....+.....++.+ ..+..-+|+.+|+--|+|+|..... .|.+++++--....
T Consensus 20 ~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~ 97 (405)
T 3zu3_A 20 TAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNS 97 (405)
T ss_dssp CCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHH
T ss_pred CCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhH
Confidence 3456665443 44555666666665 3345557788888899999998888 99988776432211
Q ss_pred HHHHHHHHHCCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 023565 105 MERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT 141 (280)
Q Consensus 105 ~~~~~~l~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (280)
......++..|.++..+..+- +.++..+...+..++.
T Consensus 98 ~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 135 (405)
T 3zu3_A 98 AAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL 135 (405)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 112335677887776554322 3333333344444444
No 198
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=56.37 E-value=93 Score=26.45 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=24.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
.+-+||..+|--|.++|..-...|.+++++-
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 3557788888888888888888888877764
No 199
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=56.33 E-value=37 Score=27.71 Aligned_cols=73 Identities=8% Similarity=0.137 Sum_probs=45.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC--CCHHHHHHHHHCCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST--CSMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKT 141 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~--~~~~~~~~l~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (280)
.+-+|+..+|--|.++|..-...|.++++....+ ........++..|.++..+..+ .+.++..+...+..++.
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 3557777778889999999899999887776332 2334566677778776555422 23334444444444444
No 200
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=56.32 E-value=62 Score=26.90 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=38.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
..-+||..+|--|.++|......|.+++++..... .......++..|.++..+.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 87 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 45688888899999999999999998877654432 1233455677788776654
No 201
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=56.21 E-value=46 Score=26.92 Aligned_cols=54 Identities=19% Similarity=0.142 Sum_probs=37.7
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|......|.+++++...... ......++..|.++..+.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLV 60 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 355788888999999999999999987776654222 223455666787776554
No 202
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=56.02 E-value=49 Score=27.34 Aligned_cols=54 Identities=22% Similarity=0.185 Sum_probs=38.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|......|.+++++...... ......++..|.++..+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIK 85 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 355778788899999999999999988777654322 233455667777776654
No 203
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=55.95 E-value=48 Score=29.11 Aligned_cols=51 Identities=16% Similarity=0.040 Sum_probs=37.1
Q ss_pred EEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCCC----HHHHHHHH----H--CCCEEEEEC
Q 023565 72 LIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCS----MERRIVLR----A--LGAEIILAD 122 (280)
Q Consensus 72 vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~~----~~~~~~l~----~--~Ga~v~~~~ 122 (280)
|+-.+. .|.++|++.+++++|++++++.|++-. +..+..++ . .|+++..+.
T Consensus 164 va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 164 FAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp EEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 555554 489999999999999999999998643 23333333 2 688888776
No 204
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=55.91 E-value=39 Score=28.11 Aligned_cols=54 Identities=24% Similarity=0.223 Sum_probs=37.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC---------CH----HHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC---------SM----ERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~---------~~----~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|.++|......|.+++++-.... .. .....++..|.++..+.
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAK 77 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEe
Confidence 45688888899999999999999999777654311 12 23345566788776664
No 205
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=55.84 E-value=60 Score=29.88 Aligned_cols=58 Identities=28% Similarity=0.300 Sum_probs=40.9
Q ss_pred CCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-----HHHHHHHHHCCCEEEEEC
Q 023565 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-----MERRIVLRALGAEIILAD 122 (280)
Q Consensus 65 ~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-----~~~~~~l~~~Ga~v~~~~ 122 (280)
++++.+-+|+..+|.-|.++|......|.+.++.+..+.+ ......++..|+++..+.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~ 285 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 285 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEE
Confidence 4456677888888999999999888889874444433221 334556788899887664
No 206
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=55.69 E-value=38 Score=29.05 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=34.8
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
++..+||..+..++..+- ..-.-.|+++...-..-...++..|++++.++.
T Consensus 85 v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~ 135 (365)
T 3get_A 85 IIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS 135 (365)
T ss_dssp EEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS
T ss_pred EEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec
Confidence 777888888877766654 222234556555545566677889999999984
No 207
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.61 E-value=12 Score=28.45 Aligned_cols=97 Identities=14% Similarity=0.036 Sum_probs=58.4
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~-~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
+++..+.|..|..+|...+..|.+++++-+. +.+...++ .+|..++..+..
T Consensus 21 ~v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~~d~~------------------------- 72 (155)
T 2g1u_A 21 YIVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVVGDAA------------------------- 72 (155)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEESCTT-------------------------
T ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEEecCC-------------------------
Confidence 4777788999999999998888877766543 23333333 445544322210
Q ss_pred CCCCccHHHHHHhHHHHHHHhh-CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeC
Q 023565 150 FENPANPKIHYETTGPEIWQDS-GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEP 209 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~-~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~ 209 (280)
+ . +.+++. -...|.||++++.-....-+....+..+|..++++...
T Consensus 73 --~---~---------~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 73 --E---F---------ETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp --S---H---------HHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred --C---H---------HHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 0 0 011111 02468888888876665555566666677777776553
No 208
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=55.55 E-value=80 Score=26.35 Aligned_cols=54 Identities=24% Similarity=0.214 Sum_probs=39.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC--------CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--------SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~--------~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|.-|+++|..-...|.+++++-.... -......++..|.++..+.
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV 71 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEE
Confidence 45588888899999999999999998777764432 1234556677788887664
No 209
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=55.52 E-value=66 Score=28.58 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=70.4
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
++|-..+-|+-|.++|..++.+|++++.+=|.. +. ......|++. . +.+ +++++. +...++-
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 238 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PR---SMLEENGVEP--A----SLE-------DVLTKS-DFIFVVA 238 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CH---HHHHHTTCEE--C----CHH-------HHHHSC-SEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CH---HHHhhcCeee--C----CHH-------HHHhcC-CEEEEcC
Confidence 358888889999999999999999987775542 22 2345577752 1 122 334444 4555433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEeCC
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKENNPDIKVYGVEPS 210 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~~~p~~~vigVe~~ 210 (280)
-.++.+ ..-+..+.++++ +++.+++-++.|+.. ..+..++++ ..+. .+.+..
T Consensus 239 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~-aaLDV~ 292 (365)
T 4hy3_A 239 AVTSEN----KRFLGAEAFSSM--RRGAAFILLSRADVVDFDALMAAVSS--GHIV-AASDVY 292 (365)
T ss_dssp CSSCC-------CCCHHHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT--TSSE-EEESCC
T ss_pred cCCHHH----HhhcCHHHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc--CCce-EEeeCC
Confidence 333332 223445777887 478999999999875 345555554 3445 455543
No 210
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=55.50 E-value=57 Score=27.21 Aligned_cols=54 Identities=19% Similarity=0.127 Sum_probs=39.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC-CCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS-TCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~-~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|.++|......|.+++++-.. .........++..|.++..+.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 88 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA 88 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 355778888889999999999999987776543 233455666777787776654
No 211
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=55.44 E-value=68 Score=26.41 Aligned_cols=54 Identities=15% Similarity=0.192 Sum_probs=38.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEECC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS 123 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~~ 123 (280)
.-+|+..+|.-|.++|......|.++++....+.. ......++..|.++..+..
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEc
Confidence 45788888999999999999999998776544322 2334556677888876653
No 212
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=55.33 E-value=57 Score=26.57 Aligned_cols=54 Identities=26% Similarity=0.193 Sum_probs=36.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|..-...|.+++++...... ......++..|.++..+.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 62 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLE 62 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 356888889999999999999999987776543111 122334555677665543
No 213
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=55.27 E-value=60 Score=27.70 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=39.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC-----------CCCHHHHHHHHHCCCEEEEECC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS-----------TCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~-----------~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.+-+||..+|--|.++|..-...|.+++++-.. .........++..|.++..+..
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS 93 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEEC
Confidence 355777778888999999988999988776432 1123445667778888877754
No 214
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=55.10 E-value=79 Score=27.62 Aligned_cols=104 Identities=22% Similarity=0.168 Sum_probs=65.8
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|...+-|+.|.++|..++.+|++++++-+.. +.. ....+|++. + +.+ +++++. +...++-
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 227 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPII-SPE---VSASFGVQQ--L----PLE-------EIWPLC-DFITVHT 227 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-CHH---HHHHTTCEE--C----CHH-------HHGGGC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCc-chh---hhhhcCcee--C----CHH-------HHHhcC-CEEEEec
Confidence 347778889999999999999999987665543 222 345678753 1 122 233444 4555433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT--GAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~--Gi~~~~k~ 197 (280)
..++.+. ..+..+.++++ +++.+++-+|+|+..- .+..++++
T Consensus 228 P~t~~t~----~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 228 PLLPSTT----GLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCCTTTT----TSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHHH----HhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 2233221 12234666776 4789999999998655 66667765
No 215
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=55.10 E-value=31 Score=28.73 Aligned_cols=54 Identities=22% Similarity=0.265 Sum_probs=38.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
..-+|+..+|--|.++|..-...|.++++...... .......++..|.++..+.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEE
Confidence 35577888888999999999999998877665332 2234455667788776654
No 216
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=55.04 E-value=64 Score=29.96 Aligned_cols=58 Identities=29% Similarity=0.306 Sum_probs=41.5
Q ss_pred CCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-----CHHHHHHHHHCCCEEEEEC
Q 023565 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-----SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 65 ~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-----~~~~~~~l~~~Ga~v~~~~ 122 (280)
++++.+-+|+..+|.-|.++|......|.+.++++..+. .......++..|+++..+.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~ 318 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAA 318 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEE
Confidence 345667788888899999999998889996444443322 1345567788899887764
No 217
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=55.01 E-value=86 Score=27.19 Aligned_cols=104 Identities=23% Similarity=0.215 Sum_probs=63.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|...+.|+.|.++|..++.+|++++++-+... . ...+.+|.+. . ++++ +.++. +.+.+.-
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~-~---~~~~~~g~~~---~---~l~~-------~l~~a-DvVil~v 212 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK-E---EVERELNAEF---K---PLED-------LLRES-DFVVLAV 212 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-H---HHHHHHCCEE---C---CHHH-------HHHHC-SEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc-h---hhHhhcCccc---C---CHHH-------HHhhC-CEEEECC
Confidence 3588888999999999999999998776655432 2 2334457642 1 2222 23333 4554433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT--GAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~--Gi~~~~k~ 197 (280)
-.++.. ...+..++.+.+ +++.+++-++.|+... .+..+++.
T Consensus 213 p~~~~t----~~~i~~~~~~~m--k~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 213 PLTRET----YHLINEERLKLM--KKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222211 011224666666 4678899999998766 66777766
No 218
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=54.85 E-value=33 Score=28.18 Aligned_cols=52 Identities=15% Similarity=0.064 Sum_probs=35.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcC---CcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARG---YNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G---~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+-+|+..+|.-|.++|......| .+++++.........+..+...+.++..+
T Consensus 23 ~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~ 77 (267)
T 1sny_A 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHIL 77 (267)
T ss_dssp EEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEE
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEE
Confidence 45788888999999999999899 88877765443333444454445555444
No 219
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=54.74 E-value=87 Score=25.59 Aligned_cols=36 Identities=11% Similarity=0.097 Sum_probs=28.0
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCC
Q 023565 173 GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPS 210 (280)
Q Consensus 173 ~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~ 210 (280)
++||+|||. +...+.|+..++++.+ .++.|+|.+..
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~~ 230 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFNNA 230 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEecCc
Confidence 578999975 4567779999999876 36789988753
No 220
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=54.56 E-value=50 Score=29.35 Aligned_cols=46 Identities=17% Similarity=0.139 Sum_probs=31.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH-HHHHCCCEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEI 118 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~l~~~Ga~v 118 (280)
++|+..+.||.|..+|.....+|.+++ +.+. ++.++. ..+.+|++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVv-v~D~--~~~~l~~~a~~~ga~~ 220 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLV-VTDV--NKAAVSAAVAEEGADA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS--CHHHHHHHHHHHCCEE
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEE-EEcC--CHHHHHHHHHHcCCEE
Confidence 458888889999999999999999865 4432 233333 223346543
No 221
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=54.54 E-value=28 Score=29.74 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=35.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
.++..+||..+..++..+- .+-.-.|+++...-..-...++.+|++++.++..
T Consensus 70 ~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 122 (354)
T 3ly1_A 70 SILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML 122 (354)
T ss_dssp GEEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC
T ss_pred HEEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchHHHHHHHHcCCEEEEecCC
Confidence 3777888888877776654 2222244455444445567788899999999753
No 222
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=54.44 E-value=54 Score=27.09 Aligned_cols=54 Identities=19% Similarity=0.089 Sum_probs=36.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|......|.+++++...... ......++..|.++..+.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 86 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEE
Confidence 355888888999999999999999987776543211 122344566677665554
No 223
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=54.42 E-value=55 Score=27.70 Aligned_cols=54 Identities=17% Similarity=0.111 Sum_probs=37.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+.+|+..+|.-|.++|......|.+++++-..... ......++..|.++..+.
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 86 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEE
Confidence 356888888999999999999999987766543211 223445566677765543
No 224
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=54.28 E-value=34 Score=28.96 Aligned_cols=33 Identities=27% Similarity=0.252 Sum_probs=25.9
Q ss_pred CeEEEEeCCCh--HHHHHHHHHHHcCCcEEEEeCC
Q 023565 69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 69 ~~~vv~~SsGN--~g~alA~~a~~~G~~~~ivvp~ 101 (280)
.+-+|+..+|+ -|+++|......|.+++++-..
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 35577877777 9999999999999987766543
No 225
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=54.18 E-value=63 Score=26.61 Aligned_cols=72 Identities=24% Similarity=0.138 Sum_probs=44.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHH----HHHHHHHCCCEEEEECCCC-CHHHHHHHHHHHHHh
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSME----RRIVLRALGAEIILADSAL-RFEEILEKGEEILKK 140 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~----~~~~l~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (280)
.+-+|+..+|--|+++|......|.+++++.....+.. ....++..|.++..+..+- +.++..+...+..++
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35578888888999999998889998877654333333 3445566788887664322 333333334444443
No 226
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=54.15 E-value=32 Score=28.90 Aligned_cols=54 Identities=22% Similarity=0.319 Sum_probs=38.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
..-+|+..+|--|.++|......|.+++++-..+.. ......++..|.++..+.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 355888888999999999999999988777643321 233455667788776654
No 227
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=54.10 E-value=54 Score=28.08 Aligned_cols=54 Identities=17% Similarity=0.036 Sum_probs=35.2
Q ss_pred EEEEeCCChHHHHHHHHHHHcC------------CcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARG------------YNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G------------~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
.++..+||..+..++..+.... -.-.|+++...-..-...++.+|++++.++.+
T Consensus 88 ~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 88 YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK 153 (397)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC
T ss_pred CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC
Confidence 4777788888777666553321 12355555555555667778889999999753
No 228
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=53.92 E-value=29 Score=29.04 Aligned_cols=54 Identities=15% Similarity=0.064 Sum_probs=35.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+.+|+..+|.-|.++|......|.+++++..... .......++..|.++..+.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 99 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 99 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEE
Confidence 35588888899999999998888988777442211 1122344555677765554
No 229
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=53.89 E-value=88 Score=25.41 Aligned_cols=116 Identities=19% Similarity=0.119 Sum_probs=61.0
Q ss_pred cCCcEEEEeCCC-C-C-------------HHHHHHHHHCCC-EEEEECCCCCH-HHHHHHHHHHHHhCCCeEEcCCCCCC
Q 023565 91 RGYNLIIVMPST-C-S-------------MERRIVLRALGA-EIILADSALRF-EEILEKGEEILKKTPDGYLLRQFENP 153 (280)
Q Consensus 91 ~G~~~~ivvp~~-~-~-------------~~~~~~l~~~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~ 153 (280)
.|+|++++-... . + ..-.+.+...|. ++.++.+.... .++.+-.++..++.+-..-.......
T Consensus 78 ~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~ 157 (280)
T 3gyb_A 78 SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHTHIAHLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLGP 157 (280)
T ss_dssp -CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCSC
T ss_pred cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCCeEEEEeCCCchHHHHHHHHHHHHHHcCcCCCcccccCC
Confidence 899988774322 1 0 112233334454 56566543222 22333334444554221111112222
Q ss_pred ccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCC
Q 023565 154 ANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPS 210 (280)
Q Consensus 154 ~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~ 210 (280)
.....++ ....+++++- ++||+||+. +..++.|+..++++.+ .++.|+|.+-.
T Consensus 158 ~~~~~~~-~~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 214 (280)
T 3gyb_A 158 AVEHAGY-TETLALLKEH-PEVTAIFSS--NDITAIGALGAARELGLRVPEDLSIIGYDNT 214 (280)
T ss_dssp CCHHHHH-HHHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESCC
T ss_pred CCHHHHH-HHHHHHHhCC-CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCeeEEEEECCc
Confidence 3332344 3455666653 679999975 4667889999999876 36889998853
No 230
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=53.84 E-value=58 Score=27.04 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=37.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|+++|......|.+++++-.... .......++..|.++..+.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 35578888889999999999999998777643321 1223445566788876654
No 231
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=53.80 E-value=28 Score=29.13 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=38.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-C--CH-HHHH---HHHHCCCEEEEECC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-C--SM-ERRI---VLRALGAEIILADS 123 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-~--~~-~~~~---~l~~~Ga~v~~~~~ 123 (280)
+-+|+..+|+-|.+++......|.+++++.... . .+ .+.. .++..|++++..+-
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 64 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC
Confidence 347888889999999999888899988877543 1 22 3333 34456888877764
No 232
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=53.79 E-value=93 Score=25.67 Aligned_cols=46 Identities=17% Similarity=-0.031 Sum_probs=33.0
Q ss_pred HHHHHHHhhC--CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCC
Q 023565 163 TGPEIWQDSG--GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPS 210 (280)
Q Consensus 163 ~~~Ei~~q~~--~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~ 210 (280)
...+++++.+ ..||+||+ .+..++.|+..++++.+ .++.|+|.+-.
T Consensus 179 ~~~~~l~~~~~~~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~D~~ 230 (295)
T 3hcw_A 179 YMQNLHTRLKDPNIKQAIIS--LDAMLHLAILSVLYELNIEIPKDVMTATFNDS 230 (295)
T ss_dssp HHHHHHHHHTCTTSCEEEEE--SSHHHHHHHHHHHHHTTCCTTTTEEEEEECCS
T ss_pred HHHHHHhhcccCCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEeCCh
Confidence 3455666542 36899886 45677889999999877 36789988753
No 233
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=53.72 E-value=63 Score=28.44 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=65.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|-..+-|+-|.++|..++.+|++++.+=+...+.... .|++. ++ +.+ +++++. +...++-
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l~-------ell~~s-DvV~l~~ 235 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TLD-------SLLGAS-DIFLIAA 235 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SHH-------HHHHTC-SEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CHH-------HHHhhC-CEEEEec
Confidence 357788889999999999999999988776654333221 15543 22 222 334444 4555433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~ 197 (280)
-.++.+ +..+..+.++++ +++.+++-++.|+.. ..+..++++
T Consensus 236 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 279 (345)
T 4g2n_A 236 PGRPEL----KGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRS 279 (345)
T ss_dssp CCCGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 223322 233456777887 478999999999875 344555554
No 234
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=53.67 E-value=85 Score=25.19 Aligned_cols=48 Identities=15% Similarity=0.163 Sum_probs=34.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
+++..+.|..|..+|......|. ++ ++..+ +.+...++ .|.+++..+.
T Consensus 11 ~viI~G~G~~G~~la~~L~~~g~-v~-vid~~--~~~~~~~~-~~~~~i~gd~ 58 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGSEV-FV-LAEDE--NVRKKVLR-SGANFVHGDP 58 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTSEE-EE-EESCG--GGHHHHHH-TTCEEEESCT
T ss_pred EEEEECCChHHHHHHHHHHhCCe-EE-EEECC--HHHHHHHh-cCCeEEEcCC
Confidence 47888889999999998888887 44 44432 34555556 7887776654
No 235
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=53.50 E-value=25 Score=31.38 Aligned_cols=46 Identities=15% Similarity=0.209 Sum_probs=34.2
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
+|+..+.|..|++++..++.+|.++++ .... +.+.+.++.+|++++
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~~-~d~~--~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 174 RVLVFGVGVAGLQAIATAKRLGAVVMA-TDVR--AATKEQVESLGGKFI 219 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE-ECSC--STTHHHHHHTTCEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEE-EeCC--HHHHHHHHHcCCeEE
Confidence 488888999999999999999997443 3332 234555667999865
No 236
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=53.39 E-value=63 Score=26.58 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=44.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT 141 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (280)
.+-+|+..+|--|.++|..-...|.+++++-.... .......++..|.++..+..+- +.++..+...+..++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45688888899999999999999998777654311 1223445566777776654221 3333333344444443
No 237
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=53.29 E-value=93 Score=26.85 Aligned_cols=106 Identities=16% Similarity=0.072 Sum_probs=64.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|...+-|+.|.++|..++.+|++++++-+...... ..+.+|++. ++ +.+ ++.++. +...++-
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvVil~~ 210 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS---DEASYQATF--HD---SLD-------SLLSVS-QFFSLNA 210 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh---hhhhcCcEE--cC---CHH-------HHHhhC-CEEEEec
Confidence 3477788899999999999999998776655122322 334567753 21 222 233343 4554433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~ 197 (280)
..++... ..+..+.++.+ +++.+++-+|+|+.. ..+..++++
T Consensus 211 p~~~~t~----~~i~~~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 211 PSTPETR----YFFNKATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp CCCTTTT----TCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred cCchHHH----hhcCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 2233221 12224556666 468999999999764 466777765
No 238
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=53.26 E-value=58 Score=26.77 Aligned_cols=53 Identities=23% Similarity=0.205 Sum_probs=37.9
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|--|.++|......|.++++....+.. ....+.++..|.++..+.
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~ 82 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLS 82 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEE
Confidence 45788888899999999999999998776655432 234556666777665554
No 239
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=53.25 E-value=36 Score=27.37 Aligned_cols=52 Identities=21% Similarity=0.254 Sum_probs=40.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCC-EEEEECC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA-EIILADS 123 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga-~v~~~~~ 123 (280)
.+-+|+..+|.-|.+++......|.+++++.... .+...+...+. +++..|-
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~Dl 74 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVANL 74 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECCT
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEccc
Confidence 3558888889999999999999999988887543 34445556688 8877763
No 240
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=53.09 E-value=62 Score=29.40 Aligned_cols=51 Identities=22% Similarity=0.294 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
|++.+.+..+.+ .|.--.| .+++..+.||-|..+|.....+|.+++.+.+.
T Consensus 199 ~Gv~~~~~~~~~~~g~~l~g-k~vaVqG~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 199 LGALLVLEALAKRRGLDLRG-ARVVVQGLGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp HHHHHHHHHHHHHHTCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHHHhcCCCccC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 577777666543 4542233 45888888999999998888888887766654
No 241
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=53.02 E-value=21 Score=31.23 Aligned_cols=53 Identities=13% Similarity=0.175 Sum_probs=34.4
Q ss_pred HHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHC
Q 023565 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRAL 114 (280)
Q Consensus 59 a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~ 114 (280)
+.+...+++|.+ |+..++|.-|.+....|+.+|.+.++++.. ++.|++.++.+
T Consensus 171 ~l~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~l 223 (363)
T 3m6i_A 171 GLQRAGVRLGDP-VLICGAGPIGLITMLCAKAAGACPLVITDI--DEGRLKFAKEI 223 (363)
T ss_dssp HHHHHTCCTTCC-EEEECCSHHHHHHHHHHHHTTCCSEEEEES--CHHHHHHHHHH
T ss_pred HHHHcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEECC--CHHHHHHHHHh
Confidence 344555778877 444556999999988898888873333322 34566666555
No 242
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=52.92 E-value=29 Score=30.03 Aligned_cols=53 Identities=13% Similarity=0.028 Sum_probs=31.7
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
.|+..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++..
T Consensus 94 ~v~~~~G~~~al~~~~~~l-~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~ 146 (369)
T 3cq5_A 94 NLWAANGSNEILQQLLQAF-GGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG 146 (369)
T ss_dssp GEEEESHHHHHHHHHHHHH-CSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC
T ss_pred hEEECCChHHHHHHHHHHh-cCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 3777777777776655543 2222234444333334555778899999988743
No 243
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=52.91 E-value=96 Score=25.56 Aligned_cols=148 Identities=9% Similarity=0.025 Sum_probs=75.5
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEeCC-ChHHHHHHHHHHHcCCcEEEEeCC--C------C-----CH-----HHH-HHHH
Q 023565 53 YSMIKDAEDKGLITPGKTTLIEVTS-GNTGVGLAFIAAARGYNLIIVMPS--T------C-----SM-----ERR-IVLR 112 (280)
Q Consensus 53 ~~~l~~a~~~g~~~~g~~~vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~--~------~-----~~-----~~~-~~l~ 112 (280)
...+..+.+++. ..+|.... .+........++..|+|++.+-.. . . .. .-. .+++
T Consensus 51 ~~~i~~l~~~~v-----dgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~ 125 (297)
T 3rot_A 51 VQFIESALATYP-----SGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALE 125 (297)
T ss_dssp HHHHHHHHHTCC-----SEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHH
Confidence 345555666654 23554433 232233444566678888776421 1 0 01 112 2223
Q ss_pred HC--CCEEEEECCCCCH---HHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchh
Q 023565 113 AL--GAEIILADSALRF---EEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT 187 (280)
Q Consensus 113 ~~--Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~ 187 (280)
.. ..++.++.+..+. .++.+-.++..++. +.-+.....+ .....++ ....+++++- +++|+|++.. ...
T Consensus 126 ~g~~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~-g~~~~~~~~~-~~~~~~~-~~~~~~l~~~-~~~~ai~~~~--d~~ 199 (297)
T 3rot_A 126 LTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDK-GIFFEELDVG-TDPNQVQ-SRVKSYFKIH-PETNIIFCLT--SQA 199 (297)
T ss_dssp HCTTCCEEEEEESCTTCHHHHHHHHHHHHHHHHT-TCEEEEEECC-SCHHHHH-HHHHHHHHHC-TTCCEEEESS--HHH
T ss_pred hcCCCceEEEEeCCCCcHHHHHHHHHHHHHHHhc-CCeEEEeecC-CChHHHH-HHHHHHHHhC-CCCCEEEEcC--Ccc
Confidence 33 3466555332221 23333344445554 3322211111 2222233 3445666554 6799998754 667
Q ss_pred HHHHHHHHHhcC-----CCcEEEEEeCCC
Q 023565 188 VTGAGRFLKENN-----PDIKVYGVEPSE 211 (280)
Q Consensus 188 ~~Gi~~~~k~~~-----p~~~vigVe~~~ 211 (280)
+.|+..++++.+ .++.|+|.+...
T Consensus 200 A~g~~~al~~~g~~vP~~dv~vig~D~~~ 228 (297)
T 3rot_A 200 LDPLGQMLLHPDRYDFNYQPQVYSFDKTP 228 (297)
T ss_dssp HHHHHHHHHSHHHHTCCCCCEEEEECCCH
T ss_pred hHHHHHHHHhcCCccCCCceEEEEeCCCH
Confidence 789999998775 378999998643
No 244
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=52.37 E-value=62 Score=26.27 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=38.0
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+||..+|--|.++|......|.++++...... .....+.++..|.++..+.
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4578888899999999999999999887665432 1233455667788776654
No 245
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=52.24 E-value=54 Score=27.87 Aligned_cols=45 Identities=22% Similarity=0.185 Sum_probs=28.9
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v 118 (280)
++...+.|+.|+++|..++.+|.+++++-+. +.+...+..+|+++
T Consensus 159 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~ 203 (300)
T 2rir_A 159 QVAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVP 203 (300)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEE
T ss_pred EEEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeE
Confidence 3667777888888888888888766555443 23444444566654
No 246
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=52.20 E-value=54 Score=28.05 Aligned_cols=54 Identities=20% Similarity=0.095 Sum_probs=39.6
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHH---HHHHCCCEEEEECC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-CSMERRI---VLRALGAEIILADS 123 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-~~~~~~~---~l~~~Ga~v~~~~~ 123 (280)
+-+|+..+|..|.+++......|.+++++.... ..+.+.. .++..|.+++..+-
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl 69 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI 69 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec
Confidence 347888889999999999999999999888654 3344443 34456777776663
No 247
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=52.12 E-value=50 Score=27.09 Aligned_cols=54 Identities=13% Similarity=0.159 Sum_probs=37.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|..-...|.+++++-.... .......++..|.++..+.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 67 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE 67 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 45588888899999999998899998776654321 1223445667788776654
No 248
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=52.12 E-value=62 Score=26.90 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=36.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++...... ......++..|.++..+.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 77 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 77 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 355888888999999999999999987776543211 122344555677665543
No 249
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=52.01 E-value=57 Score=27.17 Aligned_cols=53 Identities=23% Similarity=0.169 Sum_probs=37.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+||..+|--|.++|..-...|.+++++-.... .......++..|.++..+.
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 79 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS 79 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 5588888899999999999999998766654321 1223455666787776654
No 250
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=51.88 E-value=67 Score=26.58 Aligned_cols=54 Identities=17% Similarity=0.056 Sum_probs=36.3
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
..-+|+..+|.-|+++|......|.+++++-..... ......++..|.++..+.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 76 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 76 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 456888888999999999999999987766543211 122344555676665543
No 251
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=51.49 E-value=54 Score=27.64 Aligned_cols=55 Identities=15% Similarity=0.216 Sum_probs=38.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC---CHHHHHHHHHCCCEEEEECC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC---SMERRIVLRALGAEIILADS 123 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~---~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.+-+|+..+|--|.++|..-...|.+++++..... .......++..|.++..+..
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG 107 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEe
Confidence 35588888899999999999999998776543311 12233455678888877653
No 252
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=51.28 E-value=1.4e+02 Score=26.95 Aligned_cols=100 Identities=14% Similarity=-0.032 Sum_probs=51.6
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHH--HcCCcEEEEeCCCCC-------------
Q 023565 40 TMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA--ARGYNLIIVMPSTCS------------- 104 (280)
Q Consensus 40 ~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~--~~G~~~~ivvp~~~~------------- 104 (280)
...|.|..+.. ...+....+++....|..-+|+.+|+--|+++|.+-+ ..|.+++++-.....
T Consensus 34 ~~~p~g~~~~v--~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~ 111 (418)
T 4eue_A 34 DVHPYGCRREV--LNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNN 111 (418)
T ss_dssp CCCHHHHHHHH--HHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHH
T ss_pred cCCCccHHHHH--HHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchH
Confidence 34565554422 2334444456555555666777777777777334444 448887776533211
Q ss_pred HHHHHHHHHCCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 023565 105 MERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT 141 (280)
Q Consensus 105 ~~~~~~l~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (280)
......++..|.++..+..+- +.++..+...+..++.
T Consensus 112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 233345577888776554222 3333333344444443
No 253
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=51.25 E-value=73 Score=26.05 Aligned_cols=32 Identities=16% Similarity=0.208 Sum_probs=22.4
Q ss_pred CeEEEEeCCCh--HHHHHHHHHHHcCCcEEEEeC
Q 023565 69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 69 ~~~vv~~SsGN--~g~alA~~a~~~G~~~~ivvp 100 (280)
.+-+|+..+|. -|.++|..-...|.+++++..
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r 41 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYA 41 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 35577777777 888888877777777655543
No 254
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=51.23 E-value=50 Score=28.48 Aligned_cols=52 Identities=21% Similarity=0.334 Sum_probs=35.9
Q ss_pred cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 62 ~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~-~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
...+ +|.+ |+..+.|..|.+++..|+.+|. +++++.. ++.+++.++.+ ++.+
T Consensus 160 ~~~~-~g~~-VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~l-a~~v 212 (343)
T 2dq4_A 160 GSGV-SGKS-VLITGAGPIGLMAAMVVRASGAGPILVSDP---NPYRLAFARPY-ADRL 212 (343)
T ss_dssp TTCC-TTSC-EEEECCSHHHHHHHHHHHHTTCCSEEEECS---CHHHHGGGTTT-CSEE
T ss_pred hCCC-CCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHh-HHhc
Confidence 5556 7777 5444559999999999999998 6655543 35666666666 6543
No 255
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=50.97 E-value=1e+02 Score=25.19 Aligned_cols=149 Identities=18% Similarity=0.176 Sum_probs=79.4
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEeCCC-hHHHHHHHHHHHcCCcEEEEeCCC---CC-----H-----HHHHHHHH--CCC
Q 023565 53 YSMIKDAEDKGLITPGKTTLIEVTSG-NTGVGLAFIAAARGYNLIIVMPST---CS-----M-----ERRIVLRA--LGA 116 (280)
Q Consensus 53 ~~~l~~a~~~g~~~~g~~~vv~~SsG-N~g~alA~~a~~~G~~~~ivvp~~---~~-----~-----~~~~~l~~--~Ga 116 (280)
...+..+..++. ..+|..... .........+...|+|++.+-... .+ . .-.+.+.. .|-
T Consensus 51 ~~~~~~l~~~~v-----dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~ 125 (291)
T 3l49_A 51 VSQIQTLIAQKP-----DAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGK 125 (291)
T ss_dssp HHHHHHHHHHCC-----SEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC-----CEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCC
Confidence 344555555554 336655443 344455556677899977764221 11 1 11223333 454
Q ss_pred -EEEEECCCCCHH---HHHHHHHHHHHhCCCeEEcCCC---CCCccHHHHHHhHHHHHHHhhCC---CCCEEEEecCCch
Q 023565 117 -EIILADSALRFE---EILEKGEEILKKTPDGYLLRQF---ENPANPKIHYETTGPEIWQDSGG---KVDAFISGIGTGG 186 (280)
Q Consensus 117 -~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~~vG~Gg 186 (280)
++.++.+..+.. ++.+-.++..++.++.-.+.+. ........++ ....+++++- + +||+||+. +..
T Consensus 126 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~~~~ai~~~--~d~ 201 (291)
T 3l49_A 126 GNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSAY-SNVTDMLTKY-PNEGDVGAIWAC--WDV 201 (291)
T ss_dssp EEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHHH-HHHHHHHHHC-CSTTSCCEEEES--SHH
T ss_pred ceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHHH-HHHHHHHHhC-CCcCCcCEEEEC--CCc
Confidence 555554322222 2333334445555344323221 1112232233 4455666654 5 79999865 567
Q ss_pred hHHHHHHHHHhcCC-CcEEEEEeCC
Q 023565 187 TVTGAGRFLKENNP-DIKVYGVEPS 210 (280)
Q Consensus 187 ~~~Gi~~~~k~~~p-~~~vigVe~~ 210 (280)
.+.|+..++++.+- ++.|+|.+-.
T Consensus 202 ~a~g~~~al~~~g~~di~vvg~d~~ 226 (291)
T 3l49_A 202 PMIGATQALQAAGRTDIRTYGVDGS 226 (291)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEECC
T ss_pred hHHHHHHHHHHcCCCCeEEEEecCC
Confidence 88899999998775 8899999864
No 256
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=50.91 E-value=67 Score=31.68 Aligned_cols=57 Identities=25% Similarity=0.313 Sum_probs=41.5
Q ss_pred CCCCeEEEEeCCChHHHHHHHHHH-HcCCcEEEEeCCC---C--CHHHHHHHHHCCCEEEEEC
Q 023565 66 TPGKTTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPST---C--SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 66 ~~g~~~vv~~SsGN~g~alA~~a~-~~G~~~~ivvp~~---~--~~~~~~~l~~~Ga~v~~~~ 122 (280)
+++.+-+|+..+|-.|+++|..-. ..|.+.++++..+ . ....++.++..|+++..+.
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~ 590 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQA 590 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEE
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEE
Confidence 345666788888889999998776 7899866666543 2 2455677888999987765
No 257
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=50.89 E-value=21 Score=32.48 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHH----HHHCCCEEEEEC
Q 023565 79 NTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (280)
Q Consensus 79 N~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----l~~~Ga~v~~~~ 122 (280)
|.+++++.++.++|++++++.|+.- .+..+.. ++..|+++..+.
T Consensus 206 nVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 206 SVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 5999999999999999999999864 4444433 445788887775
No 258
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=50.86 E-value=71 Score=25.54 Aligned_cols=53 Identities=15% Similarity=0.231 Sum_probs=36.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|--|+++|......|.++++....+.. ......++..|.++..+.
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 57 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFG 57 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEe
Confidence 44788888999999999999999988775444321 112234555677776654
No 259
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=50.74 E-value=71 Score=28.29 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=53.0
Q ss_pred CcEEEEeCCCCCHHHHHHHHHCC-CEEEEECCCCCHHH---HHHHHHHHHHhCCCeEEc-CCC-CCCccHHHHHHhHHHH
Q 023565 93 YNLIIVMPSTCSMERRIVLRALG-AEIILADSALRFEE---ILEKGEEILKKTPDGYLL-RQF-ENPANPKIHYETTGPE 166 (280)
Q Consensus 93 ~~~~ivvp~~~~~~~~~~l~~~G-a~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~-~~~-~~~~~~~~g~~t~~~E 166 (280)
.|..++.-.+.-...-..++.+| -++.++.+....+. ..++..+..++.+-.+.+ ... .||.. ....-+.+
T Consensus 10 ~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~---~~v~~~~~ 86 (387)
T 3bfj_A 10 VPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKD---TNVRDGLA 86 (387)
T ss_dssp CCSEEEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBH---HHHHHHHH
T ss_pred CCCeEEECCCHHHHHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCH---HHHHHHHH
Confidence 45556665554444445566677 56666543222222 345555555544222222 222 23322 12223334
Q ss_pred HHHhhCCCCCEEEEecCCchhHHHHHHHHHhc----------C-------CCcEEEEEeCCC
Q 023565 167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKEN----------N-------PDIKVYGVEPSE 211 (280)
Q Consensus 167 i~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~----------~-------p~~~vigVe~~~ 211 (280)
.+++. ++| +|+++|||+. .=++++.... . +.+++|.|-+..
T Consensus 87 ~~~~~--~~d-~IIavGGGsv-~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 87 VFRRE--QCD-IIVTVGGGSP-HDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp HHHHT--TCC-EEEEEESHHH-HHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECST
T ss_pred HHHhc--CCC-EEEEeCCcch-hhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 44443 467 5678887664 3344433321 1 456777776644
No 260
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.72 E-value=50 Score=27.49 Aligned_cols=54 Identities=19% Similarity=0.178 Sum_probs=37.3
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC----------CCCHHH----HHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS----------TCSMER----RIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~----------~~~~~~----~~~l~~~Ga~v~~~~ 122 (280)
..-+||..+|--|+++|..-...|.+++++-.. ..+..+ ...++..|.++..+.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRV 83 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEE
Confidence 456888888999999999999999988776431 112333 344566787776654
No 261
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.57 E-value=71 Score=23.74 Aligned_cols=96 Identities=13% Similarity=0.099 Sum_probs=57.0
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH---HCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR---ALGAEIILADSALRFEEILEKGEEILKKTPDGYLLR 148 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~---~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 148 (280)
++..+.|..|..++......|.+++++-+.. +.+.+.++ ..|.+++..+
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~V~vid~~~--~~~~~~~~~~~~~~~~~i~gd-------------------------- 57 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQNVTVISNLP--EDDIKQLEQRLGDNADVIPGD-------------------------- 57 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECCC--HHHHHHHHHHHCTTCEEEESC--------------------------
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCC--hHHHHHHHHhhcCCCeEEEcC--------------------------
Confidence 6677889999999988887888777766531 22222221 1233332222
Q ss_pred CCCCCccHHHHHHhHHHHHHHhh-CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEe
Q 023565 149 QFENPANPKIHYETTGPEIWQDS-GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVE 208 (280)
Q Consensus 149 ~~~~~~~~~~g~~t~~~Ei~~q~-~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe 208 (280)
+... +.+++. -...|.||++++.-..-.-++...|.++|..+|+...
T Consensus 58 ----~~~~---------~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 58 ----SNDS---------SVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ----TTSH---------HHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred ----CCCH---------HHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1111 112222 1356888888887666666667777888888877644
No 262
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=50.57 E-value=43 Score=27.45 Aligned_cols=54 Identities=24% Similarity=0.300 Sum_probs=37.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|......|.+++++...+.. ......++..|.++..+.
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~ 77 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEE
Confidence 355788888999999999999999987776652221 122345566787776554
No 263
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=50.21 E-value=73 Score=25.96 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=35.4
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|.-|+++|..-...|.+++++...... ......++..|.++..+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 57 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVK 57 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 45888888999999999999999987776543211 122344555676665543
No 264
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=50.03 E-value=72 Score=29.27 Aligned_cols=51 Identities=16% Similarity=0.048 Sum_probs=37.6
Q ss_pred HHHHHHHHHHH-HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 50 RIAYSMIKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~-~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
||+.+.+..+. +.|.--.| .+++..+.||-|..+|......|.+++.+.+.
T Consensus 211 ~Gv~~~~~~~~~~~G~~l~g-~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~ 262 (449)
T 1bgv_A 211 YGSVYYVEAVMKHENDTLVG-KTVALAGFGNVAWGAAKKLAELGAKAVTLSGP 262 (449)
T ss_dssp HHHHHHHHHHHHHTTCCSTT-CEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHHHHHHccCCcCC-CEEEEECCCHHHHHHHHHHHHCCCEEEEEEeC
Confidence 67777777655 45532233 55888888999999999888889888876643
No 265
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=49.96 E-value=1.3e+02 Score=26.65 Aligned_cols=88 Identities=14% Similarity=0.171 Sum_probs=49.5
Q ss_pred HHHHHHHHCCC-EEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCC-CCCEEEEecC
Q 023565 106 ERRIVLRALGA-EIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG-KVDAFISGIG 183 (280)
Q Consensus 106 ~~~~~l~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~-~~d~vv~~vG 183 (280)
.-++..+.+|+ +|+.++.+ ++..+.++++- -...+ .+.+.. ...++.+..++ .+|.|+-++|
T Consensus 228 ~aiqlak~~Ga~~Vi~~~~~---~~~~~~~~~lG----a~~vi-~~~~~~--------~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 228 AAVAILKHAGASKVILSEPS---EVRRNLAKELG----ADHVI-DPTKEN--------FVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp HHHHHHHHTTCSEEEEECSC---HHHHHHHHHHT----CSEEE-CTTTSC--------HHHHHHHHTTTCCCSEEEECSS
T ss_pred HHHHHHHHcCCCEEEEECCC---HHHHHHHHHcC----CCEEE-cCCCCC--------HHHHHHHHhCCCCCCEEEECCC
Confidence 35777789999 89988754 34555555442 11223 222221 22344444433 5999999998
Q ss_pred Cch-hHHHHHHHH-HhcCCCcEEEEEeC
Q 023565 184 TGG-TVTGAGRFL-KENNPDIKVYGVEP 209 (280)
Q Consensus 184 ~Gg-~~~Gi~~~~-k~~~p~~~vigVe~ 209 (280)
+.. ++..+...+ +...+.-+++.+-.
T Consensus 292 ~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 863 444444444 22266667766543
No 266
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=49.80 E-value=1.1e+02 Score=25.14 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=49.6
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+.+.++.+.. ......+.| -... .....+..++.++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~D-v~~~-~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAART--VERLEDVAKQVTDTG-RRALSVGTD-ITDD-AQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CCEEEEECC-TTCH-HHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC--HHHHHHHHHHHHhcC-CcEEEEEcC-CCCH-HHHHHHHHHHHHHc
Confidence 5666665433 345567777889999999853 233333334443332 333222332 2222 34456667788877
Q ss_pred CCCCCEEEEecCC
Q 023565 172 GGKVDAFISGIGT 184 (280)
Q Consensus 172 ~~~~d~vv~~vG~ 184 (280)
+.+|.+|..+|.
T Consensus 87 -g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 -GRVDVVINNAFR 98 (264)
T ss_dssp -SCCSEEEECCCS
T ss_pred -CCCcEEEECCCC
Confidence 689999998875
No 267
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=49.69 E-value=24 Score=29.30 Aligned_cols=24 Identities=42% Similarity=0.553 Sum_probs=21.7
Q ss_pred CChHHHHHHHHHHHcCCcEEEEeC
Q 023565 77 SGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 77 sGN~g~alA~~a~~~G~~~~ivvp 100 (280)
||-.|.++|.++...|.+++++..
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccHHHHHHHHHHHHCCCEEEEEEC
Confidence 699999999999999999988754
No 268
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=49.61 E-value=76 Score=27.68 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=68.1
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQF 150 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (280)
+|...+-|+.|.++|..++.+|++++++-+...+. . ...|++. ++ .+ +++++. +...++--
T Consensus 143 tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~----~~~g~~~--~~----l~-------ell~~a-DvV~l~~P 203 (334)
T 2pi1_A 143 TLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED-L----KEKGCVY--TS----LD-------ELLKES-DVISLHVP 203 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH-H----HHTTCEE--CC----HH-------HHHHHC-SEEEECCC
T ss_pred eEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchh-h----HhcCcee--cC----HH-------HHHhhC-CEEEEeCC
Confidence 57788889999999999999999988776553322 1 1356643 11 22 233444 45555432
Q ss_pred CCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEeCC
Q 023565 151 ENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKENNPDIKVYGVEPS 210 (280)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~~~p~~~vigVe~~ 210 (280)
.++.+ ...+..+.++++ ++..+++-+|.|+.. ..+..++++. .+.=.+.+..
T Consensus 204 ~t~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g--~i~gA~lDV~ 257 (334)
T 2pi1_A 204 YTKET----HHMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQRG--KFSGLGLDVF 257 (334)
T ss_dssp CCTTT----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHTT--CEEEEEESCC
T ss_pred CChHH----HHhhCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHhC--CceEEEeecC
Confidence 23322 123345777887 578999999999864 4445555442 2333345543
No 269
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=49.56 E-value=34 Score=30.98 Aligned_cols=44 Identities=14% Similarity=0.147 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHH----HHHCCCEEEEEC
Q 023565 79 NTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (280)
Q Consensus 79 N~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----l~~~Ga~v~~~~ 122 (280)
|.++|+..++.++|++++++.|+.- ++.-+.. .+..|+++..+.
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7899999999999999999999853 4544433 346799888776
No 270
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=49.56 E-value=54 Score=26.47 Aligned_cols=54 Identities=15% Similarity=0.178 Sum_probs=36.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|..-...|.+++++...... ......++..|.++..+.
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 66 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR 66 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEE
Confidence 355788888999999999998899887776543211 122345556677766554
No 271
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=49.51 E-value=57 Score=30.34 Aligned_cols=97 Identities=18% Similarity=0.143 Sum_probs=61.2
Q ss_pred CCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCC
Q 023565 63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP 142 (280)
Q Consensus 63 g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 142 (280)
+...+|.+ |+..+.|+-|..+|..++.+|.+++++-+ ++.+....+.+|+++ + ++++ ..+..
T Consensus 269 ~~~l~Gkt-V~IiG~G~IG~~~A~~lka~Ga~Viv~d~---~~~~~~~A~~~Ga~~--~----~l~e-------~l~~a- 330 (494)
T 3ce6_A 269 DALIGGKK-VLICGYGDVGKGCAEAMKGQGARVSVTEI---DPINALQAMMEGFDV--V----TVEE-------AIGDA- 330 (494)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCEE--C----CHHH-------HGGGC-
T ss_pred CCCCCcCE-EEEEccCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCEE--e----cHHH-------HHhCC-
Confidence 33456655 88888999999999999999987555433 345666677889974 2 2322 22333
Q ss_pred CeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchh
Q 023565 143 DGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT 187 (280)
Q Consensus 143 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~ 187 (280)
+.++... .++..+ ..+.++.+ ++..+++-+|.+..
T Consensus 331 DvVi~at-gt~~~i-------~~~~l~~m--k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 331 DIVVTAT-GNKDII-------MLEHIKAM--KDHAILGNIGHFDN 365 (494)
T ss_dssp SEEEECS-SSSCSB-------CHHHHHHS--CTTCEEEECSSSGG
T ss_pred CEEEECC-CCHHHH-------HHHHHHhc--CCCcEEEEeCCCCC
Confidence 4454432 222222 23556666 46788899998875
No 272
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=49.23 E-value=38 Score=27.86 Aligned_cols=54 Identities=20% Similarity=0.278 Sum_probs=35.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|......|.+++++-..... ......++..|.++..+.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 61 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 355778888889999999999999987765433211 122334455677776554
No 273
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=49.21 E-value=1.1e+02 Score=24.95 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=20.9
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcCC----CcEEEEEe
Q 023565 173 GKVDAFISGIGTGGTVTGAGRFLKENNP----DIKVYGVE 208 (280)
Q Consensus 173 ~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p----~~~vigVe 208 (280)
++||+||+. +..++.|+..++++.+- ++.|+|.+
T Consensus 176 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 213 (277)
T 3cs3_A 176 TEPVDVFAF--NDEMAIGVYKYVAETNYQMGKDIRIIGFD 213 (277)
T ss_dssp CSSEEEEES--SHHHHHHHHHHHTTSSCCBTTTEEEECSS
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHcCCCCCCcEEEEEeC
Confidence 457777764 45566777777776652 34555544
No 274
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=49.11 E-value=57 Score=27.50 Aligned_cols=54 Identities=22% Similarity=0.280 Sum_probs=38.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC---------CCHH----HHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST---------CSME----RRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~---------~~~~----~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|.++|..-...|.+++++-... .... ....++..|.++..+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQ 95 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEE
Confidence 3568888889999999999999999988764321 1122 3445667788776654
No 275
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=49.08 E-value=66 Score=29.31 Aligned_cols=71 Identities=11% Similarity=0.166 Sum_probs=45.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHh
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKK 140 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~ 140 (280)
.+-+||..+|--|.++|..-...|.+++++-............+..+.+++.+|-+ +.++..+...+..++
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-d~~~v~~~~~~~~~~ 284 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-ADDAVDKITAHVTEH 284 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-STTHHHHHHHHHHHH
T ss_pred CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 45577888888899999888888998666543333334445556678888888754 333333334444444
No 276
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=48.94 E-value=72 Score=26.12 Aligned_cols=54 Identities=20% Similarity=0.214 Sum_probs=36.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|......|.+++++...... ......++..|.++..+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 62 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 355888888999999999999999987776543211 122344555676665543
No 277
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=48.93 E-value=33 Score=29.44 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=62.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|-..+-|+.|.++|..++.+|++++++-+...+... .+ .+. +.+ +++++. +...+.-
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--------~~--~~~---~l~-------ell~~a-DiV~l~~ 181 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV--------DV--ISE---SPA-------DLFRQS-DFVLIAI 181 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC--------SE--ECS---SHH-------HHHHHC-SEEEECC
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc--------cc--ccC---ChH-------HHhhcc-CeEEEEe
Confidence 35788888999999999999999998888654322111 11 111 222 233444 4554433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchh--HHHHHHHHHhc
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT--VTGAGRFLKEN 198 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~--~~Gi~~~~k~~ 198 (280)
..++.+- ..+..+.++++ +++.+++-+|.|+. -..+..++++.
T Consensus 182 P~t~~t~----~li~~~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~g 226 (290)
T 3gvx_A 182 PLTDKTR----GMVNSRLLANA--RKNLTIVNVARADVVSKPDMIGFLKER 226 (290)
T ss_dssp CCCTTTT----TCBSHHHHTTC--CTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred eccccch----hhhhHHHHhhh--hcCceEEEeehhcccCCcchhhhhhhc
Confidence 2233221 12334666776 57889999999985 45566666654
No 278
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=48.86 E-value=15 Score=32.16 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=57.1
Q ss_pred eCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHH-----HHHHHHH--------CCCEEEEECC--CCCHHHHHHHHHHHH
Q 023565 75 VTSGNTGVGLAFIAAARGYNLIIVMPST-CSME-----RRIVLRA--------LGAEIILADS--ALRFEEILEKGEEIL 138 (280)
Q Consensus 75 ~SsGN~g~alA~~a~~~G~~~~ivvp~~-~~~~-----~~~~l~~--------~Ga~v~~~~~--~~~~~~~~~~a~~~~ 138 (280)
.|||..|.++|-++...|..++++..+. .++. ....++. .|..++.++. ...+.++.....+..
T Consensus 62 ~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~ 141 (313)
T 1p9o_A 62 FSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAA 141 (313)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhh
Confidence 4668899999999999999999988543 2221 1112232 3444555442 234444444444333
Q ss_pred HhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhC--CCCCEEEEecC
Q 023565 139 KKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG--GKVDAFISGIG 183 (280)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~~vG 183 (280)
.+ +.+...+|.+ . .-|-..-.++++.+. ++.|.+|.++.
T Consensus 142 ~~--~~l~~i~f~t---v-~eyl~~L~~~~~~l~~~~~~di~i~aAA 182 (313)
T 1p9o_A 142 AA--GTFLVVEFTT---L-ADYLHLLQAAAQALNPLGPSAMFYLAAA 182 (313)
T ss_dssp HH--TCEEEEEECB---H-HHHHHHHHHHHHHHGGGGGGEEEEECSB
T ss_pred cc--ccceeecccc---H-HHHHHHHHHhhHHhhccCCCCEEEECCc
Confidence 33 3455556643 2 235444455544332 35677776654
No 279
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=48.81 E-value=59 Score=27.39 Aligned_cols=53 Identities=17% Similarity=0.055 Sum_probs=35.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~ 121 (280)
.+-+|+..+|.-|+++|......|.+++++...... ......++..|.++..+
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 88 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGY 88 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Confidence 355888888999999999999999987776543111 12234455566555443
No 280
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=48.72 E-value=61 Score=28.37 Aligned_cols=51 Identities=20% Similarity=0.192 Sum_probs=37.5
Q ss_pred EEEeCC-ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHH----HHCCCEEEEEC
Q 023565 72 LIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVL----RALGAEIILAD 122 (280)
Q Consensus 72 vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l----~~~Ga~v~~~~ 122 (280)
|+..+. +|.+++++.+++.+|++++++.|++- ++.-+..+ +..|+++..+.
T Consensus 160 va~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 160 LAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp EEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 444443 89999999999999999999999864 33333332 45688888776
No 281
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=48.64 E-value=47 Score=26.99 Aligned_cols=54 Identities=22% Similarity=0.274 Sum_probs=36.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++...+.. ......++..|.++..+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 60 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 355788888999999999999999988776652221 122344555677665543
No 282
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=48.44 E-value=1.2e+02 Score=25.38 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=52.8
Q ss_pred CCcEEEEeCCC----CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHH
Q 023565 92 GYNLIIVMPST----CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI 167 (280)
Q Consensus 92 G~~~~ivvp~~----~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei 167 (280)
.-+.++|.-.+ .-....+.+...|++|+.++.+ .+..+.+.++.++.+...++ +.| -... .....+..++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~-~~D-v~d~-~~v~~~~~~~ 103 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG---DALKKRVEPLAEELGAFVAG-HCD-VADA-ASIDAVFETL 103 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHHHHHHTCEEEE-ECC-TTCH-HHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHhcCCceEE-ECC-CCCH-HHHHHHHHHH
Confidence 33667777643 3345677778889999998754 23334444554444333332 322 2222 2345666677
Q ss_pred HHhhCCCCCEEEEecCCch
Q 023565 168 WQDSGGKVDAFISGIGTGG 186 (280)
Q Consensus 168 ~~q~~~~~d~vv~~vG~Gg 186 (280)
.++. +.+|.+|..+|...
T Consensus 104 ~~~~-g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 104 EKKW-GKLDFLVHAIGFSD 121 (293)
T ss_dssp HHHT-SCCSEEEECCCCCC
T ss_pred HHhc-CCCCEEEECCccCC
Confidence 7777 58999999998653
No 283
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=48.28 E-value=40 Score=28.95 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=32.8
Q ss_pred eEEEEeCCChHHHHHHHHHHH----cCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEECC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAA----RGYNLIIVMPSTC-SMERRIVLRALGAEIILADS 123 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~----~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~~ 123 (280)
..++..+||..+..++..+-. -|- -+++..... .......++..|++++.++.
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd-~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNK-NVLVVSTGTFSDRFADCLRSYGAQVDVVRP 117 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCC-EEEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCC-eEEEEcCCcchHHHHHHHHHcCCceEEEec
Confidence 357888888888887776653 232 233332222 22223567889999999875
No 284
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=48.26 E-value=65 Score=26.97 Aligned_cols=53 Identities=19% Similarity=0.151 Sum_probs=36.4
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.-+|+..+|--|.++|..-...|.+++++-..... ......++..|.++..+.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 83 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALE 83 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 55888888999999999999999987776543211 222344555677776554
No 285
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=47.86 E-value=1.1e+02 Score=24.97 Aligned_cols=30 Identities=13% Similarity=0.305 Sum_probs=21.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+-+|+..+|--|+++|......|.+++++.
T Consensus 13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~ 42 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHY 42 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 457777778888888877776676655544
No 286
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=47.72 E-value=83 Score=25.47 Aligned_cols=54 Identities=19% Similarity=0.180 Sum_probs=36.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|......|.+++++...+.+ ......++..|.++..+.
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~ 63 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEE
Confidence 355788888999999999999999987776542221 122344566687776654
No 287
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=47.63 E-value=1.1e+02 Score=27.73 Aligned_cols=51 Identities=24% Similarity=0.143 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeCCChHHHHHHHHHHH-cCCcEEEEeCC
Q 023565 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~ 101 (280)
|++.+.+..+.+ .|.--.| .+++..+.||-|..+|..... +|.+++.+.+.
T Consensus 190 ~Gv~~~~~~~~~~~g~~l~g-~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGIDPKK-ATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HHHHHHHHHHHHHTTCCTTT-CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCcCC-CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 577777776554 5542233 558888889999999877777 77777766654
No 288
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=47.49 E-value=84 Score=28.75 Aligned_cols=51 Identities=22% Similarity=0.215 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
||+.+.+..+.+ .|.--.| .+|+....||-|..+|......|.+++.+.+.
T Consensus 216 ~Gv~~~~~~~~~~~g~~l~g-~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 216 RGVFITAAAAAEKIGLQVEG-ARVAIQGFGNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp HHHHHHHHHHHHHHTCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCccC-CEEEEeccCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 567777766543 4542233 45888888999999999888888888766654
No 289
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=47.42 E-value=39 Score=30.19 Aligned_cols=52 Identities=15% Similarity=0.258 Sum_probs=38.2
Q ss_pred EEEEeCCC--hHHHHHHHHHHHcCCcEEEEeCCCCC----HHHHH----HHHHCCCEEEEEC
Q 023565 71 TLIEVTSG--NTGVGLAFIAAARGYNLIIVMPSTCS----MERRI----VLRALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~SsG--N~g~alA~~a~~~G~~~~ivvp~~~~----~~~~~----~l~~~Ga~v~~~~ 122 (280)
+|+-.+.+ |.+.|+..+++++|++++++.|+.-. +.-+. ..+..|+++..+.
T Consensus 182 kva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 243 (365)
T 4amu_A 182 KIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFST 243 (365)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEES
T ss_pred EEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 36666665 88999999999999999999998643 23322 2456788887776
No 290
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=47.42 E-value=1.1e+02 Score=24.82 Aligned_cols=17 Identities=6% Similarity=-0.142 Sum_probs=12.4
Q ss_pred eCHHHHHHHHHHhhhcC
Q 023565 248 VSHKIDLHLLHFCCCSS 264 (280)
Q Consensus 248 V~d~ea~~~~~~la~~e 264 (280)
.+.+|+.+++.+|+..+
T Consensus 222 ~~p~dva~~v~~l~s~~ 238 (266)
T 3oig_A 222 TTPEEVGDTAAFLFSDM 238 (266)
T ss_dssp CCHHHHHHHHHHHHSGG
T ss_pred CCHHHHHHHHHHHcCCc
Confidence 45678888888887753
No 291
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=47.23 E-value=63 Score=29.87 Aligned_cols=51 Identities=14% Similarity=0.012 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
|+..+.+..+.+ .| ......+|+..+.||-|..+|.....+|.+++.+.+.
T Consensus 233 ~Gv~~~~~~~l~~~G-~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~ 284 (470)
T 2bma_A 233 YGLVYFVLEVLKSLN-IPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDS 284 (470)
T ss_dssp HHHHHHHHHHHHTTT-CCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEET
T ss_pred HHHHHHHHHHHHhcc-CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeC
Confidence 566677766654 34 2222355888889999999998888888877755543
No 292
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=47.10 E-value=38 Score=30.51 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=30.4
Q ss_pred CCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC
Q 023565 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (280)
Q Consensus 65 ~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~ 102 (280)
+.|+.+ |....+|..|+.++.+|+.+|++++++-+..
T Consensus 32 ~~~~~~-IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 32 ILPGAW-LGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 446545 8888999999999999999999998876543
No 293
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=47.04 E-value=96 Score=25.66 Aligned_cols=54 Identities=28% Similarity=0.231 Sum_probs=37.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCCC---EEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGA---EIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~Ga---~v~~~~ 122 (280)
.+-+||..+|--|.++|..-...|.+++++-.... .......++..|. ++..+.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~ 69 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP 69 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEe
Confidence 45688888899999999999999998777643321 1233455666665 666554
No 294
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=47.00 E-value=73 Score=25.97 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=35.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~ 121 (280)
.+-+|+..+|.-|+++|......|.+++++...... ......++..|.++..+
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 68 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGT 68 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 355888888999999999999999987776543211 12234455567666544
No 295
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=46.75 E-value=24 Score=31.33 Aligned_cols=52 Identities=15% Similarity=0.154 Sum_probs=37.9
Q ss_pred EEEEeCC-ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHHH------CCCEEEEEC
Q 023565 71 TLIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRA------LGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~~------~Ga~v~~~~ 122 (280)
+|+..+. -|.+++++.++.++|++++++.|+.- ++.-+..++. .|+.+..+.
T Consensus 190 kva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~ 250 (353)
T 3sds_A 190 KIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT 250 (353)
T ss_dssp EEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES
T ss_pred EEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC
Confidence 3555555 57789999999999999999999875 5555555543 366777665
No 296
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=46.70 E-value=1e+02 Score=25.13 Aligned_cols=85 Identities=16% Similarity=0.253 Sum_probs=46.8
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+..+...+..++.++.....+.| -... .....+..++.++.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D-v~~~-~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRT---KEKLEEAKLEIEQFPGQILTVQMD-VRNT-DDIQKMIEQIDEKF 81 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCCSTTCEEEEECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHHhcCCcEEEEEcc-CCCH-HHHHHHHHHHHHHc
Confidence 4444443322 234566777789999998854 233333333333332233222322 2222 34456667777777
Q ss_pred CCCCCEEEEecCC
Q 023565 172 GGKVDAFISGIGT 184 (280)
Q Consensus 172 ~~~~d~vv~~vG~ 184 (280)
+.+|.+|..+|.
T Consensus 82 -g~id~lv~nAg~ 93 (257)
T 3imf_A 82 -GRIDILINNAAG 93 (257)
T ss_dssp -SCCCEEEECCCC
T ss_pred -CCCCEEEECCCC
Confidence 689999999884
No 297
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=46.68 E-value=29 Score=28.54 Aligned_cols=65 Identities=11% Similarity=0.038 Sum_probs=41.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEE 136 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~ 136 (280)
-+|+..+|--|+++|......|.+++++............++..|.++..++. .+.+...+.+.+
T Consensus 4 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~-~~v~~~~~~~~~ 68 (254)
T 1zmt_A 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSE-QEPAELIEAVTS 68 (254)
T ss_dssp EEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCC-CSHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECH-HHHHHHHHHHHH
Confidence 47888889999999999999999876654332222333335556777666632 345555444433
No 298
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=46.62 E-value=22 Score=30.62 Aligned_cols=52 Identities=17% Similarity=-0.012 Sum_probs=35.2
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
++..+||..+..++..+- .+-.-.|+++...-..-...++.+|++++.++..
T Consensus 87 v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 138 (363)
T 3ffh_A 87 LIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL 138 (363)
T ss_dssp EEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC
T ss_pred EEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 777888888877776654 2222345555545556667778899999998743
No 299
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=46.57 E-value=1e+02 Score=25.35 Aligned_cols=49 Identities=10% Similarity=0.195 Sum_probs=34.8
Q ss_pred HHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC--CCcEEEEEeCC
Q 023565 158 IHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN--PDIKVYGVEPS 210 (280)
Q Consensus 158 ~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~--p~~~vigVe~~ 210 (280)
.||. ...+++++- ++||+|||. +..++.|+..++++.+ .++.|+|.+-.
T Consensus 179 ~~~~-~~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~~dv~vvGfD~~ 229 (288)
T 1gud_A 179 KALD-VATNVLQRN-PNIKAIYCA--NDTMAMGVAQAVANAGKTGKVLVVGTDGI 229 (288)
T ss_dssp HHHH-HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEESCC
T ss_pred HHHH-HHHHHHHhC-CCceEEEEC--CCchHHHHHHHHHhcCCCCCeEEEEeCCC
Confidence 3443 345666653 579999976 4567889999999876 35888888753
No 300
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=46.51 E-value=58 Score=28.38 Aligned_cols=105 Identities=17% Similarity=0.127 Sum_probs=64.6
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.++...+-|+.|.++|..++.+|++++++-+...+.. ....+|++. + +.++ ++++. +...++-
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~----~l~e-------ll~~a-DvV~l~~ 208 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQ---TEQRLGLRQ--V----ACSE-------LFASS-DFILLAL 208 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHH---HHHHHTEEE--C----CHHH-------HHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHh---HHHhcCcee--C----CHHH-------HHhhC-CEEEEcC
Confidence 4588888899999999999999999777755432332 233456532 1 1222 33444 4555433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~ 197 (280)
-.++.. ...+..|.++++ +++.+++-+|.|+.. ..+..++++
T Consensus 209 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 209 PLNADT----LHLVNAELLALV--RPGALLVNPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 223322 122345677777 578999999999864 445556654
No 301
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=46.48 E-value=73 Score=26.01 Aligned_cols=54 Identities=15% Similarity=0.140 Sum_probs=35.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|......|.+++++...... ......++..|.++..+.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEE
Confidence 355788888999999999999999887766433111 122334455577776554
No 302
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=46.44 E-value=1.1e+02 Score=24.50 Aligned_cols=149 Identities=11% Similarity=0.075 Sum_probs=76.3
Q ss_pred HHHHHHHHHcC-CCCCCCeEEEEeCC-ChHHHHHHHHHHHcCCcEEEEeCC--C---CC-----HH-----HH-HHHHHC
Q 023565 53 YSMIKDAEDKG-LITPGKTTLIEVTS-GNTGVGLAFIAAARGYNLIIVMPS--T---CS-----ME-----RR-IVLRAL 114 (280)
Q Consensus 53 ~~~l~~a~~~g-~~~~g~~~vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~--~---~~-----~~-----~~-~~l~~~ 114 (280)
...+..+.+++ . .+++..+. ..........+...|+|++.+-.. . .+ .. -. .+++.+
T Consensus 48 ~~~i~~l~~~~~v-----dgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~ 122 (276)
T 3ksm_A 48 IQILSYHLSQAPP-----DALILAPNSAEDLTPSVAQYRARNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATL 122 (276)
T ss_dssp HHHHHHHHHHSCC-----SEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCC-----CEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhc
Confidence 34455555555 4 23555543 223334445567778988877421 1 01 11 12 223333
Q ss_pred ---CC-EEEEECCCCCH---HHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchh
Q 023565 115 ---GA-EIILADSALRF---EEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT 187 (280)
Q Consensus 115 ---Ga-~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~ 187 (280)
|- ++.++.+..+. .++.+-.++..++.++.-+............++ ....+++++- ++||+|++. +..+
T Consensus 123 ~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~ai~~~--~d~~ 198 (276)
T 3ksm_A 123 DLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIRIIAAPYAGDDRGAAR-SEMLRLLKET-PTIDGLFTP--NEST 198 (276)
T ss_dssp CTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEEECCBCCSSHHHHH-HHHHHHHHHC-SCCCEEECC--SHHH
T ss_pred CcCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCcEEEEEecCCCcHHHHH-HHHHHHHHhC-CCceEEEEC--Cchh
Confidence 43 45555432221 233333344445543443322222222332333 3445666554 678998865 4567
Q ss_pred HHHHHHHHHhcC--CCcEEEEEeCC
Q 023565 188 VTGAGRFLKENN--PDIKVYGVEPS 210 (280)
Q Consensus 188 ~~Gi~~~~k~~~--p~~~vigVe~~ 210 (280)
+.|+..++++.+ .++.|+|.+..
T Consensus 199 a~g~~~al~~~g~p~di~vig~d~~ 223 (276)
T 3ksm_A 199 TIGALVAIRQSGMSKQFGFIGFDQT 223 (276)
T ss_dssp HHHHHHHHHHTTCTTSSEEEEESCC
T ss_pred hhHHHHHHHHcCCCCCeEEEEeCCC
Confidence 889999999877 36888888754
No 303
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=46.39 E-value=1.5e+02 Score=25.97 Aligned_cols=116 Identities=18% Similarity=0.146 Sum_probs=69.9
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|-..+-|+.|.++|..++.+|++++.+-+...+... .+.+|++. ++ +.+ +++++. +...++-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~~~~g~~~--~~---~l~-------ell~~a-DvV~l~~ 228 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL---EKETGAKF--VE---DLN-------EMLPKC-DVIVINM 228 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH---HHHHCCEE--CS---CHH-------HHGGGC-SEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH---HHhCCCeE--cC---CHH-------HHHhcC-CEEEECC
Confidence 35888888999999999999999997666554334333 33456542 22 222 234444 4555433
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEeC
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKENNPDIKVYGVEP 209 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~~~p~~~vigVe~ 209 (280)
-.++.+ ...+..+.++++ +++.+++-++.|+.. ..+..++++. .+.-.+.+.
T Consensus 229 Plt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~ga~lDV 282 (351)
T 3jtm_A 229 PLTEKT----RGMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVESG--HIGGYSGDV 282 (351)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEESC
T ss_pred CCCHHH----HHhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHhC--CccEEEeCC
Confidence 223322 123345777887 578999999999874 4455566543 233334444
No 304
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=46.18 E-value=1.3e+02 Score=25.27 Aligned_cols=136 Identities=10% Similarity=0.055 Sum_probs=71.8
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeC-----------------CCCC--HHHHHHHHHCCC-EEEEECCCCCHH-
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP-----------------STCS--MERRIVLRALGA-EIILADSALRFE- 128 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp-----------------~~~~--~~~~~~l~~~Ga-~v~~~~~~~~~~- 128 (280)
..|+...+.....+++-.+...++|++.+.. .+.. ..-.+.+...|. +|.++..+..+.
T Consensus 74 ~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~ 153 (358)
T 3hut_A 74 VGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGL 153 (358)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCCEEEEEEESSHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCCEEEEEecCcHHHH
Confidence 4466555566667778888899999877521 1000 122344445575 554443222222
Q ss_pred HHHHHHHHHHHhCCCeEEcC-CCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEE
Q 023565 129 EILEKGEEILKKTPDGYLLR-QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGV 207 (280)
Q Consensus 129 ~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigV 207 (280)
+..+..++..++.+..+... .+.. .. ..+.....+|.+ .+||.||++ +.+..+.++...+++.+-++++++.
T Consensus 154 ~~~~~~~~~l~~~g~~v~~~~~~~~-~~--~~~~~~~~~l~~---~~~d~i~~~-~~~~~a~~~~~~~~~~g~~~p~~~~ 226 (358)
T 3hut_A 154 SSAQAFRKAFELRGGAVVVNEEVPP-GN--RRFDDVIDEIED---EAPQAIYLA-MAYEDAAPFLRALRARGSALPVYGS 226 (358)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECT-TC--CCCHHHHHHHHH---HCCSEEEEE-SCHHHHHHHHHHHHHTTCCCCEEEC
T ss_pred HHHHHHHHHHHHcCCEEEEEEecCC-CC--ccHHHHHHHHHh---cCCCEEEEc-cCchHHHHHHHHHHHcCCCCcEEec
Confidence 33333445555553222111 1110 00 012222333332 258888776 4556788999999998888888877
Q ss_pred eCCCC
Q 023565 208 EPSES 212 (280)
Q Consensus 208 e~~~~ 212 (280)
.....
T Consensus 227 ~~~~~ 231 (358)
T 3hut_A 227 SALYS 231 (358)
T ss_dssp GGGCS
T ss_pred CcccC
Confidence 65433
No 305
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=46.07 E-value=1.1e+02 Score=24.89 Aligned_cols=86 Identities=15% Similarity=0.161 Sum_probs=47.7
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+.+.++.+.. ......+.| -... .....+..++.++.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~D-v~d~-~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK--SEGAEAVAAAIRQAG-GKAIGLECN-VTDE-QHREAVIKAALDQF 87 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS--HHHHHHHHHHHHHTT-CCEEEEECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcC-CcEEEEECC-CCCH-HHHHHHHHHHHHHc
Confidence 3444443322 234566666779999999853 223333333333333 333222332 2222 34456667777887
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 88 -g~id~lv~nAg~~ 100 (256)
T 3gaf_A 88 -GKITVLVNNAGGG 100 (256)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 5899999998864
No 306
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=45.91 E-value=1.2e+02 Score=24.49 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=48.9
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+...++.+.. ......+.| -.+. .....+..++.++.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~D-~~~~-~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADIN--AEAAEAVAKQIVADG-GTAISVAVD-VSDP-ESAKAMADRTLAEF 84 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEECC-TTSH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC--HHHHHHHHHHHHhcC-CcEEEEEcc-CCCH-HHHHHHHHHHHHHc
Confidence 4555554332 245567777789999999853 233333334443333 333333332 2222 24456667777777
Q ss_pred CCCCCEEEEecCC
Q 023565 172 GGKVDAFISGIGT 184 (280)
Q Consensus 172 ~~~~d~vv~~vG~ 184 (280)
+.+|.+|..+|.
T Consensus 85 -g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 -GGIDYLVNNAAI 96 (253)
T ss_dssp -SCCCEEEECCCC
T ss_pred -CCCCEEEECCCc
Confidence 589999999886
No 307
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=45.70 E-value=93 Score=27.45 Aligned_cols=106 Identities=13% Similarity=0.139 Sum_probs=64.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCc-EEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLR 148 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~-~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 148 (280)
.+|...+-|+.|.++|..++.+|++ ++++-+...+.. ..+.+|++. +. +.+ +++++. +...++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvV~l~ 228 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD---AEEKVGARR--VE---NIE-------ELVAQA-DIVTVN 228 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH---HHHHTTEEE--CS---SHH-------HHHHTC-SEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh---HHHhcCcEe--cC---CHH-------HHHhcC-CEEEEC
Confidence 3588888899999999999999997 776654433333 345677542 22 222 233443 455543
Q ss_pred CCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 023565 149 QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (280)
Q Consensus 149 ~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~ 197 (280)
--.++.+ ...+..+.++++ +++.+++-++.|+.. ..+..++++
T Consensus 229 ~P~t~~t----~~li~~~~l~~m--k~ga~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 229 APLHAGT----KGLINKELLSKF--KKGAWLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp CCCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCChHH----HHHhCHHHHhhC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 3223222 122334666776 468999999999864 455666665
No 308
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=45.66 E-value=35 Score=24.69 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=29.4
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v 118 (280)
++..+.|..|..++......|.+++++-.. +.+.+.++..|.++
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~---~~~~~~~~~~~~~~ 52 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDIN---EEKVNAYASYATHA 52 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEESC---HHHHHTTTTTCSEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhCCEE
Confidence 666667999999999998888887766432 34444444444443
No 309
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=45.65 E-value=58 Score=26.92 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=37.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC---------CCHHH----HHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST---------CSMER----RIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~---------~~~~~----~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|.++|..-...|.+++++-... ....+ ...++..|.++..+.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQ 80 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEe
Confidence 4568888889999999999999999987765321 11222 334456677776654
No 310
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=45.39 E-value=1e+02 Score=24.92 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=34.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|......|.+++++-.. ........+.+|.++..+.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~ 58 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDIN--AEGAKAAAASIGKKARAIA 58 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC--HHHHHHHHHHHCTTEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCceEEEE
Confidence 456888888999999999999999986665322 2222233344577776654
No 311
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=45.37 E-value=81 Score=22.51 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=22.6
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
++..+.|+.|..+|......|.+++++-.
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 66667899999999888878877666543
No 312
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=45.15 E-value=76 Score=26.25 Aligned_cols=52 Identities=15% Similarity=0.212 Sum_probs=34.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+.+|+..+|--|+++|..-...|.+++++-.. ........+.+|.++..+.
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~ 79 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTR--EDKLKEIAADLGKDVFVFS 79 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCSSEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCceEEEE
Confidence 355788888889999999999999887766432 2222233455677666554
No 313
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=45.07 E-value=66 Score=26.86 Aligned_cols=54 Identities=17% Similarity=0.162 Sum_probs=42.3
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 68 g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
|..-|||.+++--|+++|..-...|.++++.- .+..++..+.++..|.++..+.
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~-r~~~~~~~~~~~~~g~~~~~~~ 62 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAA-RRAPDETLDIIAKDGGNASALL 62 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSCCHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEe-CCcHHHHHHHHHHhCCcEEEEE
Confidence 34668888889999999999999999877654 4445677888899998876654
No 314
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=45.02 E-value=60 Score=29.35 Aligned_cols=73 Identities=22% Similarity=0.100 Sum_probs=45.6
Q ss_pred CeEEEEeCCChHHHHHHHHHH-HcCCcEEEEeCCCCC-------------HHHHHHHHHCCCEEEEECCCCCHHHHHHHH
Q 023565 69 KTTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPSTCS-------------MERRIVLRALGAEIILADSALRFEEILEKG 134 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~-~~G~~~~ivvp~~~~-------------~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a 134 (280)
.+.+|+..|...|+|.|.+.+ ..|-.+++|.-+..+ ..-.+.++..|.+.+.+..+-.-++..+.+
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 355888888888888887766 678887777643221 223466788888887765433234444554
Q ss_pred HHHHHhC
Q 023565 135 EEILKKT 141 (280)
Q Consensus 135 ~~~~~~~ 141 (280)
.+..++.
T Consensus 131 i~~i~~~ 137 (401)
T 4ggo_A 131 IEEAKKK 137 (401)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 4444433
No 315
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=44.96 E-value=81 Score=26.01 Aligned_cols=54 Identities=20% Similarity=0.234 Sum_probs=35.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHH-HHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVL-RALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l-~~~Ga~v~~~~ 122 (280)
..-+|+..+|.-|+++|......|.+++++...... ......+ +..|.++..+.
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 77 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 455888888999999999999999987776543111 1112223 34577665543
No 316
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=44.57 E-value=1.1e+02 Score=25.30 Aligned_cols=50 Identities=6% Similarity=0.036 Sum_probs=37.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
+-|||.+++--|+++|..-...|.+++++-. ++.+...+...+.++..+.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~---~~~~~~~~~~~~~~~~~~~ 53 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---DEKRSADFAKERPNLFYFH 53 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHTTCTTEEEEE
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhcCCEEEEE
Confidence 4488888899999999999999998776532 3566666666666665543
No 317
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=44.48 E-value=1.3e+02 Score=24.76 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=35.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCC--CEEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALG--AEIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~G--a~v~~~ 121 (280)
.+-+|+..+|.-|.++|......|.+++++...... ......++..| .++..+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEE
Confidence 355888888999999999999999987776543211 12233445555 455544
No 318
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=44.32 E-value=96 Score=25.45 Aligned_cols=53 Identities=17% Similarity=0.122 Sum_probs=36.9
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCH-HHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM-ERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~-~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|.-|.++|......|.+++++....... .....++.+|.++..+.
T Consensus 36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 89 (279)
T 3ctm_A 36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK 89 (279)
T ss_dssp EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEE
Confidence 457888889999999999888999887776543332 33344555676665553
No 319
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=44.30 E-value=1.3e+02 Score=24.50 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=19.2
Q ss_pred eEEEEeCCC-hHHHHHHHHHHHcCCcEEEEe
Q 023565 70 TTLIEVTSG-NTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 70 ~~vv~~SsG-N~g~alA~~a~~~G~~~~ivv 99 (280)
+-+|+..+| --|.++|......|.+++++-
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~ 54 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISD 54 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEec
Confidence 435555545 488888887777777655543
No 320
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=44.03 E-value=1.3e+02 Score=24.50 Aligned_cols=85 Identities=14% Similarity=0.209 Sum_probs=48.1
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+...++.+. +......+.| -... .....+..++.++.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~-~~~~~~~~~D-~~~~-~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARD--VEKLRAVEREIVAA-GGEAESHACD-LSHS-DAIAAFATGVLAAH 104 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHT-TCEEEEEECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHHh-CCceeEEEec-CCCH-HHHHHHHHHHHHhc
Confidence 4555554332 234566677789999999753 23333333333333 2333333332 2222 23455666777777
Q ss_pred CCCCCEEEEecCC
Q 023565 172 GGKVDAFISGIGT 184 (280)
Q Consensus 172 ~~~~d~vv~~vG~ 184 (280)
+.+|.+|..+|.
T Consensus 105 -g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 -GRCDVLVNNAGV 116 (262)
T ss_dssp -SCCSEEEECCCC
T ss_pred -CCCCEEEECCCc
Confidence 589999999986
No 321
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=44.01 E-value=93 Score=26.85 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=22.7
Q ss_pred eEEEEeCCChHH---HHHHHHHHHcCCcEEEEeCC
Q 023565 70 TTLIEVTSGNTG---VGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 70 ~~vv~~SsGN~g---~alA~~a~~~G~~~~ivvp~ 101 (280)
+-+|.++.||.| .++|...+..|+++.|+++.
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 446777888876 45555566678998888764
No 322
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=44.00 E-value=1.4e+02 Score=26.51 Aligned_cols=77 Identities=6% Similarity=-0.025 Sum_probs=46.1
Q ss_pred CCCchhhHHHHHHHHHHHHcCC--CCCCCeEEEEeCCChHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHCCCEE
Q 023565 43 PCSSVKDRIAYSMIKDAEDKGL--ITPGKTTLIEVTSGNTGVGLAFIAAAR--GYNLIIVMPSTCSMERRIVLRALGAEI 118 (280)
Q Consensus 43 ptGS~K~R~a~~~l~~a~~~g~--~~~g~~~vv~~SsGN~g~alA~~a~~~--G~~~~ivvp~~~~~~~~~~l~~~Ga~v 118 (280)
+.|.-..|-+..-.. ...+. +.++...++..++|+.|..++..+-.. . . .|++|.-+-..-...++..|+++
T Consensus 71 ~~G~~~lr~aia~~~--~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d-~Vlv~~P~y~~~~~~~~~~g~~~ 146 (405)
T 3k7y_A 71 GNGTEDFSTLTQNLI--FGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-E-TLYVTNPPYINHVNMIESRGFNL 146 (405)
T ss_dssp TSSCHHHHHHHHHHH--HCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-C-EEEEESSCCHHHHHHHHTTTCEE
T ss_pred CCCcHHHHHHHHHHH--cCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-C-EEEEeCCCCHhHHHHHHHcCCeE
Confidence 367766775543322 22221 122222357777788888777765444 5 4 45555555556677889999999
Q ss_pred EEECC
Q 023565 119 ILADS 123 (280)
Q Consensus 119 ~~~~~ 123 (280)
+.++-
T Consensus 147 ~~v~~ 151 (405)
T 3k7y_A 147 KYINF 151 (405)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99863
No 323
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=43.95 E-value=75 Score=26.38 Aligned_cols=53 Identities=19% Similarity=0.274 Sum_probs=37.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC---CHHHHHH---HHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC---SMERRIV---LRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~---~~~~~~~---l~~~Ga~v~~~~ 122 (280)
+-+|+..+|+-|.+++......|.+++++..... .+.+... +...|.+++..|
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D 64 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEec
Confidence 3477888899999999999999999888775432 2444433 344577776665
No 324
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=43.92 E-value=88 Score=25.52 Aligned_cols=54 Identities=20% Similarity=0.336 Sum_probs=33.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHC-CCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRAL-GAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~-Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|......|.+++++...... ......++.. |.++..+.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEE
Confidence 355788888999999999999999987665433211 1112233332 66666554
No 325
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=43.86 E-value=75 Score=25.85 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=32.2
Q ss_pred HHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCC
Q 023565 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSES 212 (280)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~ 212 (280)
..++++..++ -..+=+++|+|....-++..++...|..+|++|+....
T Consensus 73 l~~~l~~~~~-~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~ 120 (236)
T 2bm8_A 73 YHDMLWELRP-RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLS 120 (236)
T ss_dssp HHHHHHHHCC-SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCT
T ss_pred HHHHHHhcCC-CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChH
Confidence 3445544432 24566778888877766665555578899999998654
No 326
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=43.73 E-value=1.3e+02 Score=24.50 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=28.4
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCCC
Q 023565 173 GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPSE 211 (280)
Q Consensus 173 ~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~~ 211 (280)
++||+||| .+...+.|+..++++.+ .++.|+|.+-..
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~~ 225 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFDNLP 225 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEESCCG
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEecCch
Confidence 57899986 45667789999999876 368899987543
No 327
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=43.68 E-value=98 Score=25.40 Aligned_cols=88 Identities=15% Similarity=0.089 Sum_probs=48.9
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.+.....-.+..+...+..++.+......+.| -... .....+..++.++.
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~d~-~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSD-LSNE-EEVAKLFDFAEKEF 89 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECC-CCSH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECC-CCCH-HHHHHHHHHHHHHc
Confidence 4555554432 234566777789999997643211233333333333333333333332 2222 34456677788887
Q ss_pred CCCCCEEEEecCC
Q 023565 172 GGKVDAFISGIGT 184 (280)
Q Consensus 172 ~~~~d~vv~~vG~ 184 (280)
+.+|.+|..+|.
T Consensus 90 -g~iD~lvnnAg~ 101 (262)
T 3ksu_A 90 -GKVDIAINTVGK 101 (262)
T ss_dssp -CSEEEEEECCCC
T ss_pred -CCCCEEEECCCC
Confidence 679999999884
No 328
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.53 E-value=79 Score=26.09 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=37.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC---------CCHH----HHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST---------CSME----RRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~---------~~~~----~~~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|+++|..-...|.+++++-... .... ....++..|.++..+.
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAE 77 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEE
Confidence 4568888889999999999999999977764321 1122 2334556787776654
No 329
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=43.51 E-value=1.2e+02 Score=24.99 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=50.3
Q ss_pred cEEEEeCCC----CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHH
Q 023565 94 NLIIVMPST----CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ 169 (280)
Q Consensus 94 ~~~ivvp~~----~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 169 (280)
+.++|.-.+ .-....+.+...|++|+.++.+. ..+...++.++.+...++ +.| -.+. .....+..++.+
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~l~~~~~~~~~~-~~D-l~~~-~~v~~~~~~~~~ 99 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ----FKDRVEKLCAEFNPAAVL-PCD-VISD-QEIKDLFVELGK 99 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHGGGCCSEEE-ECC-TTCH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch----HHHHHHHHHHhcCCceEE-Eee-cCCH-HHHHHHHHHHHH
Confidence 566666533 33456777778899999987643 223344444444333222 222 2222 344566677777
Q ss_pred hhCCCCCEEEEecCCc
Q 023565 170 DSGGKVDAFISGIGTG 185 (280)
Q Consensus 170 q~~~~~d~vv~~vG~G 185 (280)
+. +.+|.+|..+|..
T Consensus 100 ~~-g~id~li~nAg~~ 114 (280)
T 3nrc_A 100 VW-DGLDAIVHSIAFA 114 (280)
T ss_dssp HC-SSCCEEEECCCCC
T ss_pred Hc-CCCCEEEECCccC
Confidence 76 6899999999864
No 330
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=43.42 E-value=54 Score=29.88 Aligned_cols=51 Identities=24% Similarity=0.214 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
|+..+.+..+.+ .|. .....+|+..+.||-|..+|.....+|.+++.+.+.
T Consensus 202 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~ 253 (424)
T 3k92_A 202 QGVTICIEEAVKKKGI-KLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDA 253 (424)
T ss_dssp HHHHHHHHHHHHHTTC-CGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCC-CcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 356666666543 343 333456888889999999999888888777766654
No 331
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=43.24 E-value=86 Score=25.52 Aligned_cols=54 Identities=15% Similarity=0.018 Sum_probs=35.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++...... ......++..|.++..+.
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 69 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEE
Confidence 355788888999999999999999987776543211 122334555676665443
No 332
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=43.06 E-value=1.3e+02 Score=24.83 Aligned_cols=82 Identities=13% Similarity=0.243 Sum_probs=49.5
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
|.++|.-... -..-.+.+...|++|+.++.+ . +...+.+++.++..++ +.| -... .....+..++.+++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~---~---~~~~~~~~~~~~~~~~-~~D-v~~~-~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID---E---KRSADFAKERPNLFYF-HGD-VADP-LTLKKFVEYAMEKL 73 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---H---HHHHHHHTTCTTEEEE-ECC-TTSH-HHHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC---H---HHHHHHHHhcCCEEEE-Eec-CCCH-HHHHHHHHHHHHHc
Confidence 3445443322 234567777899999999854 1 2334455555444443 322 2222 34556777888888
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|-.+|.+
T Consensus 74 -g~iDiLVNNAG~~ 86 (247)
T 3ged_A 74 -QRIDVLVNNACRG 86 (247)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 6899999888754
No 333
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=42.96 E-value=37 Score=29.96 Aligned_cols=35 Identities=31% Similarity=0.559 Sum_probs=29.7
Q ss_pred CCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 66 TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 66 ~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
.+|.+ |...++|..|+.++.+++.+|++++++-+.
T Consensus 12 ~~~k~-IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 12 LPGKT-IGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CTTSE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 34544 888899999999999999999999988754
No 334
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=42.80 E-value=1.4e+02 Score=24.43 Aligned_cols=45 Identities=16% Similarity=0.286 Sum_probs=32.4
Q ss_pred HHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCCC
Q 023565 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPSE 211 (280)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~~ 211 (280)
..+++++ .++||+|||. +..++.|+..++++.+ .++.|+|.+-..
T Consensus 179 ~~~~l~~-~~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~~~ 227 (288)
T 3gv0_A 179 GQRLMQS-SDRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQSAE 227 (288)
T ss_dssp HHHHTTS-SSCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEESST
T ss_pred HHHHHhC-CCCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecChH
Confidence 3444443 2579999865 4567789999999876 368899998654
No 335
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=42.56 E-value=49 Score=27.89 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=37.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-C--CHHHHH---HHHHCCCEEEEECC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-C--SMERRI---VLRALGAEIILADS 123 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-~--~~~~~~---~l~~~Ga~v~~~~~ 123 (280)
+-+|+..+|+.|.+++......|.+++++.... . .+.+.. .+...|.+++..|-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~ 65 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecC
Confidence 347788889999999999888899988887553 1 133332 23456777777663
No 336
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=42.43 E-value=65 Score=27.12 Aligned_cols=44 Identities=23% Similarity=0.148 Sum_probs=34.2
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~ 117 (280)
+|.....|+.|.++|......|.+++++- .++.+.+.+...|..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d---~~~~~~~~~~~~g~~ 48 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFD---LVQSAVDGLVAAGAS 48 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHTTCE
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEc---CCHHHHHHHHHCCCe
Confidence 47777889999999999999999887773 345677777666654
No 337
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=42.39 E-value=82 Score=26.45 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=22.6
Q ss_pred eEEEEeCCChHH---HHHHHHHHHcCCcEEEEeCC
Q 023565 70 TTLIEVTSGNTG---VGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 70 ~~vv~~SsGN~g---~alA~~a~~~G~~~~ivvp~ 101 (280)
+-+|.++.||.| .++|...+..|+++.++++.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 456777888876 45555556678998888754
No 338
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=42.35 E-value=1.4e+02 Score=24.78 Aligned_cols=86 Identities=12% Similarity=0.165 Sum_probs=49.1
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+.+.++ .+.++.....+.| -... .....+..++.++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l-~~~~~~~~~~~~D-v~d~-~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRT--RTEVEEVADEI-VGAGGQAIALEAD-VSDE-LQMRNAVRDLVLKF 103 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHH-TTTTCCEEEEECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHH-HhcCCcEEEEEcc-CCCH-HHHHHHHHHHHHHh
Confidence 5666665433 244566777789999999853 22333333333 2222223222332 2222 34456667777777
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 104 -g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 104 -GHLDIVVANAGIN 116 (283)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 6899999998853
No 339
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=42.23 E-value=81 Score=28.55 Aligned_cols=51 Identities=31% Similarity=0.290 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHH-cCCC-CCCCeEEEEeCCChHHHHHHHHHHH-cCCcEEEEeCC
Q 023565 50 RIAYSMIKDAED-KGLI-TPGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~~-~~g~~~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~ 101 (280)
|++.+.+..+.+ .|.- -.| ++|...+.||-|+.+|..++. +|.+++.+-+.
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~g-ktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKG-KTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTT-CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCC-CEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 577777766543 4543 234 458888899999999999999 99988877654
No 340
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=42.22 E-value=80 Score=25.58 Aligned_cols=53 Identities=9% Similarity=0.057 Sum_probs=34.3
Q ss_pred CeEEEEeCCChHHHHHHHHHHH-cCCcEEEEeCCCC-CHHHHHHHHHCCCEEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTC-SMERRIVLRALGAEIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~ 121 (280)
.+-+|+..+|.-|.++|..-.. .|.+++++..... .......++..|.++..+
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 59 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH 59 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEE
Confidence 3557888889999999998888 8998777654321 122334455556555443
No 341
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=42.05 E-value=1.4e+02 Score=25.06 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=19.9
Q ss_pred eEEEEeCCC--hHHHHHHHHHHHcCCcEEEEe
Q 023565 70 TTLIEVTSG--NTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 70 ~~vv~~SsG--N~g~alA~~a~~~G~~~~ivv 99 (280)
+.+|+..+| .-|+++|......|.+++++-
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~ 63 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTY 63 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence 446777666 677777777766676655543
No 342
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=41.95 E-value=1.6e+02 Score=27.16 Aligned_cols=55 Identities=22% Similarity=0.295 Sum_probs=40.3
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-----CCHHHHHHHHHCCCEEEEECC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-----CSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-----~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.+-+|+..+|--|.++|..-...|.+.++++... ........++..|+++..+..
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 299 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAAC 299 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEc
Confidence 5668888889999999998888998655555332 123456778889999877653
No 343
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=41.91 E-value=1.5e+02 Score=24.49 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=47.9
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+.+.++ ++.+......+.| -... .....+..++.++.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l-~~~~~~~~~~~~D-v~d~-~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARR--QARIEAIATEI-RDAGGTALAQVLD-VTDR-HSVAAFAQAAVDTW 79 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHH-HHTTCEEEEEECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHH-HhcCCcEEEEEcC-CCCH-HHHHHHHHHHHHHc
Confidence 4444444332 234566777789999999753 22323333333 3332333332322 2222 23455666777777
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|-.+|..
T Consensus 80 -g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 80 -GRIDVLVNNAGVM 92 (264)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 6899999998854
No 344
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=41.89 E-value=40 Score=29.72 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=29.2
Q ss_pred CCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 67 ~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
++. +|...++|..|+.++.+|+.+|++++++-|.
T Consensus 11 ~~~-~IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 11 FGA-TIGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp TTC-EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 443 4888899999999999999999999988764
No 345
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=41.88 E-value=53 Score=26.88 Aligned_cols=52 Identities=10% Similarity=0.022 Sum_probs=28.9
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH-HHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIV-LRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-l~~~Ga~v~~~~ 122 (280)
+-+||..+|--|+++|......|..+.|+.-.. +..+.+. .+.+|.++..+.
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r-~~~~~~~~~~~~~~~~~~~~ 56 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR-SEAPLKKLKEKYGDRFFYVV 56 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES-CHHHHHHHHHHHGGGEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecC-CHHHHHHHHHHhCCceEEEE
Confidence 447777778888888887777664333333221 1233332 334466565543
No 346
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=41.80 E-value=81 Score=25.81 Aligned_cols=44 Identities=20% Similarity=0.341 Sum_probs=31.7
Q ss_pred HHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEeC
Q 023565 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVYGVEP 209 (280)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~-p~~~vigVe~ 209 (280)
...+++++- ++||+||+. +..++.|+..++++.+ .++.|+|.+.
T Consensus 181 ~~~~ll~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~d~ 225 (290)
T 2fn9_A 181 VTEQILQAH-PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGFDG 225 (290)
T ss_dssp HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECCBC
T ss_pred HHHHHHHhC-CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEeCC
Confidence 345555553 579999875 4567789999999876 4788887764
No 347
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=41.79 E-value=49 Score=27.66 Aligned_cols=53 Identities=19% Similarity=0.299 Sum_probs=37.5
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHH---HHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIV---LRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~---l~~~Ga~v~~~~ 122 (280)
+-+|+..+|.-|.+++......|.+++++.....+ +.+... +...|.+++..+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCC
Confidence 34778888999999999998899998887755332 444433 344577776655
No 348
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=41.61 E-value=1.4e+02 Score=24.24 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=33.9
Q ss_pred HHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCC-CcEEEEEeCCC
Q 023565 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP-DIKVYGVEPSE 211 (280)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p-~~~vigVe~~~ 211 (280)
...+++++- ++||+||+. +...+.|+..++++.+- ++.|+|.+...
T Consensus 185 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~~~ 231 (293)
T 3l6u_A 185 VMRQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGIDGNR 231 (293)
T ss_dssp HHHHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred HHHHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEecCCH
Confidence 344555553 679999875 45677799999998775 88999988643
No 349
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=41.60 E-value=1.1e+02 Score=25.02 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=26.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
.+-+|+..+|.-|+++|......|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 35588888899999999999999998777654
No 350
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=41.51 E-value=1.4e+02 Score=24.25 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=21.2
Q ss_pred eEEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 70 TTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 70 ~~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
+-+|+..+ +--|.++|......|.+++++...
T Consensus 22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~ 55 (267)
T 3gdg_A 22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYAS 55 (267)
T ss_dssp EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSS
T ss_pred EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCC
Confidence 44666665 577888887777777766665433
No 351
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=41.41 E-value=1.2e+02 Score=24.52 Aligned_cols=50 Identities=24% Similarity=0.193 Sum_probs=33.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH-HHHHCCCEEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~l~~~Ga~v~~~ 121 (280)
.+-+|+..+|--|+++|......|.+++++... ..+.. ..+.+|.++..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 56 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQ 56 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTGGGEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceeEE
Confidence 455888888999999999999999987776543 23333 233446555444
No 352
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=41.37 E-value=1.5e+02 Score=24.62 Aligned_cols=87 Identities=13% Similarity=0.143 Sum_probs=50.2
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+. ....+...+..++.+......+.| -... .....+..++.++.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D-v~d~-~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE--EGDANETKQYVEKEGVKCVLLPGD-LSDE-QHCKDIVQETVRQL 123 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHTTTCCEEEEESC-TTSH-HHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHhcCCcEEEEECC-CCCH-HHHHHHHHHHHHHc
Confidence 5666665433 2445677777899999987542 233334444444433333222322 2222 34456667788887
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 124 -g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 124 -GSLNILVNNVAQQ 136 (291)
T ss_dssp -SSCCEEEECCCCC
T ss_pred -CCCCEEEECCCCc
Confidence 6899999988753
No 353
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=41.36 E-value=18 Score=31.48 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=38.8
Q ss_pred EEEEeCC---ChHHHHHHHHHHHc-CCcEEEEeCCCC-CHHHHHHHHHCCCEEEEEC
Q 023565 71 TLIEVTS---GNTGVGLAFIAAAR-GYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss---GN~g~alA~~a~~~-G~~~~ivvp~~~-~~~~~~~l~~~Ga~v~~~~ 122 (280)
+|+..+. +|.++|++.+++++ |++++++.|++- ++..+ ++..|+++..+.
T Consensus 151 ~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~ 205 (299)
T 1pg5_A 151 VFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVE 205 (299)
T ss_dssp EEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEES
T ss_pred EEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeC
Confidence 3665555 69999999999999 999999999865 33333 567898887765
No 354
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=41.29 E-value=34 Score=29.95 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=38.0
Q ss_pred EEEeCC-ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHHHH----HCCCEEEEEC
Q 023565 72 LIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (280)
Q Consensus 72 vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~l~----~~Ga~v~~~~ 122 (280)
|+..+. .|.++|++.+++++|++++++.|++- ++.....++ ..|+++..+.
T Consensus 158 va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 158 LSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp EEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 555555 57999999999999999999999875 444334333 5788887775
No 355
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=41.21 E-value=49 Score=28.59 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=32.8
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHH--HHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSME--RRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~--~~~~l~~~Ga~v~~~~~ 123 (280)
.++..+||..+..++..+.. .-.-.|+++...-.. -...++..|++++.++.
T Consensus 87 ~v~~t~g~t~al~~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 140 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAV-EPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISK 140 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHC-CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCchHHHHHHHHHhcc-CCCCEEEEEcCChhHHHHHHHHHHcCCceEEEec
Confidence 47777888888777766652 212234444433333 55667889999998874
No 356
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=41.19 E-value=1.1e+02 Score=25.28 Aligned_cols=72 Identities=17% Similarity=0.105 Sum_probs=42.8
Q ss_pred CeEEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHH-CC-CEEEEECCCCCHHHHHHHHHHHHHhC
Q 023565 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LG-AEIILADSALRFEEILEKGEEILKKT 141 (280)
Q Consensus 69 ~~~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (280)
.+-+|+..+ |--|+++|......|.+++++-.........+.++. .| ..++.+|-+ +.++..+...+..++.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 355777776 889999999999999987777654333445555543 34 344555533 3333333344444443
No 357
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=41.05 E-value=1.2e+02 Score=24.31 Aligned_cols=31 Identities=13% Similarity=0.182 Sum_probs=25.8
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
+-+|+..+|--|+++|......|.+++++-.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4588888899999999999999998776644
No 358
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=41.04 E-value=78 Score=27.10 Aligned_cols=44 Identities=27% Similarity=0.342 Sum_probs=34.2
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~ 117 (280)
+|...+.|+.|.++|......|.+++++- .++.+.+.+...|++
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~d---r~~~~~~~l~~~g~~ 76 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEAGYALQVWN---RTPARAASLAALGAT 76 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHTTTCE
T ss_pred EEEEECccHHHHHHHHHHHhCCCeEEEEc---CCHHHHHHHHHCCCE
Confidence 47778899999999999999999877763 345666666666654
No 359
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=40.92 E-value=98 Score=26.06 Aligned_cols=53 Identities=23% Similarity=0.276 Sum_probs=35.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-CHHHHHHHHHCC-CEEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALG-AEIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-~~~~~~~l~~~G-a~v~~~ 121 (280)
.+-+||..+|--|.++|..-...|.+++++-.... .......++..| .++..+
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 96 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEE
Confidence 35577888888999999999999998877754322 233455566666 455444
No 360
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=40.76 E-value=44 Score=25.48 Aligned_cols=32 Identities=22% Similarity=0.411 Sum_probs=28.5
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~ 102 (280)
.++...+|..|..+|...+..|.+++++-...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 38889999999999999999999999997653
No 361
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=40.74 E-value=1.6e+02 Score=24.69 Aligned_cols=148 Identities=7% Similarity=0.030 Sum_probs=75.8
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC-------C--------CCH-----HHHH-HH
Q 023565 53 YSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS-------T--------CSM-----ERRI-VL 111 (280)
Q Consensus 53 ~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~-------~--------~~~-----~~~~-~l 111 (280)
...+.++.++++ ..|+-..+.....+++-.+...++|++..... . .+. ...+ .+
T Consensus 59 ~~~~~~l~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (356)
T 3ipc_A 59 ISVANKFVADGV-----KFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLA 133 (356)
T ss_dssp HHHHHHHHHTTC-----CEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC-----cEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHH
Confidence 444445555554 33666666666677888888999997663210 0 011 1122 33
Q ss_pred HHCCC-EEEEECCCCCHH-HHHHHHHHHHHhCCCeE-EcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH
Q 023565 112 RALGA-EIILADSALRFE-EILEKGEEILKKTPDGY-LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV 188 (280)
Q Consensus 112 ~~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~ 188 (280)
+.+|. +|.++..+..+. +..+..++..++.+..+ ....+. +.. ..+.....++.+ .+||.||++ +.+..+
T Consensus 134 ~~~g~~~iaii~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~--~d~~~~~~~l~~---~~~d~v~~~-~~~~~a 206 (356)
T 3ipc_A 134 DHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVN-VGD--KDFSALISKMKE---AGVSIIYWG-GLHTEA 206 (356)
T ss_dssp HHCTTCCEEEEECSSHHHHHHHHHHHHHHHHTTCCCSEEEECC-TTC--CCCHHHHHHHHH---TTCCEEEEE-SCHHHH
T ss_pred HhcCCCEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEEeeC-CCC--CCHHHHHHHHHh---cCCCEEEEc-cCchHH
Confidence 44575 454443322222 23333444445543211 111111 000 012222223322 358888764 456677
Q ss_pred HHHHHHHHhcCCCcEEEEEeCCCC
Q 023565 189 TGAGRFLKENNPDIKVYGVEPSES 212 (280)
Q Consensus 189 ~Gi~~~~k~~~p~~~vigVe~~~~ 212 (280)
.++...+++.+-++++++......
T Consensus 207 ~~~~~~~~~~g~~~~~~~~~~~~~ 230 (356)
T 3ipc_A 207 GLIIRQAADQGLKAKLVSGDGIVS 230 (356)
T ss_dssp HHHHHHHHHHTCCCEEEECGGGCS
T ss_pred HHHHHHHHHCCCCCcEEEeccccC
Confidence 889999999888888887654443
No 362
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=40.74 E-value=70 Score=27.70 Aligned_cols=53 Identities=21% Similarity=0.169 Sum_probs=34.8
Q ss_pred EEEeCCChHHHHHHHHHHH------cCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 72 LIEVTSGNTGVGLAFIAAA------RGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~------~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
.+..++|..+..++..+.. .+-.-.|+++...-......++..|++++.++.+
T Consensus 52 ~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~ 110 (390)
T 3b8x_A 52 AVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDID 110 (390)
T ss_dssp EEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC
T ss_pred EEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 6667777766655555431 2222466677666666777788899999988743
No 363
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=40.71 E-value=93 Score=28.59 Aligned_cols=52 Identities=10% Similarity=-0.065 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 49 DRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 49 ~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
-|+..+.+..+.+.--......+|+..+.||-|..+|.....+|.+++.+.+
T Consensus 219 g~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 219 GYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp HHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred chHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566777777655322233335588888999999999988888888765554
No 364
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=40.62 E-value=1.2e+02 Score=26.53 Aligned_cols=105 Identities=27% Similarity=0.307 Sum_probs=63.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.++...+-|+.|+++|..++.+|++++++=+...+ . ..+.+|++. +. +.+ +++++. +.+.++-
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~---~~~~~g~~~--~~---~l~-------ell~~a-DvV~l~~ 231 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-G---VERALGLQR--VS---TLQ-------DLLFHS-DCVTLHC 231 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-T---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-h---hHhhcCCee--cC---CHH-------HHHhcC-CEEEEcC
Confidence 45778888999999999999999997776544322 1 124457642 21 222 233444 4555432
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~ 197 (280)
-.++.+- ..+..+.++++ +++.+++-+++|+.. ..+..++++
T Consensus 232 P~t~~t~----~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 232 GLNEHNH----HLINDFTVKQM--RQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp CCCTTCT----TSBSHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHHH----HHhHHHHHhcC--CCCCEEEECCCChHHhHHHHHHHHHh
Confidence 2222221 12234666666 468999999999764 455666665
No 365
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=40.48 E-value=1.2e+02 Score=24.62 Aligned_cols=84 Identities=10% Similarity=0.071 Sum_probs=48.9
Q ss_pred cEEEEeCCC----CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCCccHHHHHHhHHHHHH
Q 023565 94 NLIIVMPST----CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKIHYETTGPEIW 168 (280)
Q Consensus 94 ~~~ivvp~~----~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~ 168 (280)
+.++|.-.+ .-....+.+...|++|+.++.+. ...+...++.++.+.. ++.....+ . .....+..++.
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~Dv~~---~-~~v~~~~~~~~ 87 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD---RFKDRITEFAAEFGSELVFPCDVAD---D-AQIDALFASLK 87 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHHHHHTTCCCEEECCTTC---H-HHHHHHHHHHH
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch---hhHHHHHHHHHHcCCcEEEECCCCC---H-HHHHHHHHHHH
Confidence 445555433 22455677778899999987542 2223444454544332 22222222 2 23455667777
Q ss_pred HhhCCCCCEEEEecCCc
Q 023565 169 QDSGGKVDAFISGIGTG 185 (280)
Q Consensus 169 ~q~~~~~d~vv~~vG~G 185 (280)
++. +.+|.+|..+|..
T Consensus 88 ~~~-g~id~lv~nAg~~ 103 (271)
T 3ek2_A 88 THW-DSLDGLVHSIGFA 103 (271)
T ss_dssp HHC-SCEEEEEECCCCC
T ss_pred HHc-CCCCEEEECCccC
Confidence 777 6899999999864
No 366
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=40.32 E-value=28 Score=29.99 Aligned_cols=28 Identities=25% Similarity=0.322 Sum_probs=26.3
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
|+..++|-.|.++|+..++.|++++|+=
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 7889999999999999999999999885
No 367
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=40.27 E-value=45 Score=29.91 Aligned_cols=48 Identities=17% Similarity=0.073 Sum_probs=37.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+|+..+.|..|...|..++.+|.+++++=.. +.+++.++.+|++.+.+
T Consensus 186 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~---~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 186 SALVLGVGVAGLQALATAKRLGAKTTGYDVR---PEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp EEEEESCSHHHHHHHHHHHHHTCEEEEECSS---GGGHHHHHHTTCEECCC
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCeEEec
Confidence 4888899999999999999999975543322 35667777899987643
No 368
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=40.27 E-value=42 Score=28.60 Aligned_cols=54 Identities=19% Similarity=0.149 Sum_probs=32.6
Q ss_pred EEEEeCCChHHHHHHHHHHHc---CCcEEEEeCCCCCHHH---HHHHHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAAR---GYNLIIVMPSTCSMER---RIVLRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~---G~~~~ivvp~~~~~~~---~~~l~~~Ga~v~~~~~~ 124 (280)
.++..+||..+..++..+-.. +-.-.|+++...-+.. ...++..|++++.++.+
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG 121 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC
T ss_pred eEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC
Confidence 477788887777776665431 2223455555444333 33445689999998743
No 369
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=40.22 E-value=1.6e+02 Score=25.21 Aligned_cols=53 Identities=17% Similarity=0.046 Sum_probs=36.5
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC--CCCHHHHHH----HHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS--TCSMERRIV----LRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~--~~~~~~~~~----l~~~Ga~v~~~~ 122 (280)
+-+||..+|--|.++|......|.++++.+.. .....+++. ++..|.++..+.
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~ 65 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLE 65 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEE
Confidence 45788888999999999999999998877643 333444433 344566665543
No 370
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=40.04 E-value=99 Score=27.20 Aligned_cols=51 Identities=18% Similarity=0.291 Sum_probs=35.0
Q ss_pred EEEeCC-ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHH----HHHCCCEEEEEC
Q 023565 72 LIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (280)
Q Consensus 72 vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----l~~~Ga~v~~~~ 122 (280)
|+..+. +|.++|++.+++++|++++++.|++- ++.-+.. .+..|+.+..+.
T Consensus 178 va~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 235 (339)
T 4a8t_A 178 VVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 235 (339)
T ss_dssp EEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred EEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 444433 88899999999999999999988764 2322222 345688877765
No 371
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=40.01 E-value=56 Score=28.09 Aligned_cols=52 Identities=10% Similarity=-0.039 Sum_probs=37.7
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.|+..+||..+..++..+- ..-.-.|+++...-..-...++..|++++.++.
T Consensus 87 ~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 138 (391)
T 3dzz_A 87 WCVFASGVVPAISAMVRQF-TSPGDQILVQEPVYNMFYSVIEGNGRRVISSDL 138 (391)
T ss_dssp GEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC
T ss_pred HEEECCCHHHHHHHHHHHh-CCCCCeEEECCCCcHHHHHHHHHcCCEEEEeee
Confidence 3777788888877776664 333345667776666777788899999998874
No 372
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=40.00 E-value=73 Score=27.99 Aligned_cols=59 Identities=14% Similarity=0.215 Sum_probs=42.2
Q ss_pred CCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCH--H--HHHHHHHCCCEEEEECC
Q 023565 64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM--E--RRIVLRALGAEIILADS 123 (280)
Q Consensus 64 ~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~--~--~~~~l~~~Ga~v~~~~~ 123 (280)
.+..|. +|.|.+-+.+..++-..|...|.+..|++.++.|. . ....|...|-.+.++..
T Consensus 138 ~I~~g~-~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~D 200 (338)
T 3a11_A 138 RIEDGD-VIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKITAKELASYGIPVIYVVD 200 (338)
T ss_dssp TCCTTC-EEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG
T ss_pred HhCCCC-EEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhhHHHHHHHHhCCCCEEEEeh
Confidence 344444 48888877777776677888899999999887652 2 34566778999988863
No 373
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=39.88 E-value=42 Score=28.72 Aligned_cols=53 Identities=8% Similarity=0.028 Sum_probs=33.2
Q ss_pred EEEEeCCChHHHHHHHHHHHc---CCcEEEEeCCCCCHHH---HHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAAR---GYNLIIVMPSTCSMER---RIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~---G~~~~ivvp~~~~~~~---~~~l~~~Ga~v~~~~~ 123 (280)
.++..+||..+..++..+... .-.-.|+++...-... ...++..|++++.++.
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPV 121 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCB
T ss_pred eEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEcc
Confidence 377778888888777766541 2223455565444433 3334778999999874
No 374
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=39.82 E-value=1.2e+02 Score=24.75 Aligned_cols=71 Identities=15% Similarity=0.117 Sum_probs=40.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKT 141 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (280)
.+-+|+..+|--|.++|......|.+++++-.. ........+.++.++..+..+ .+.++..+...+..++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADID--IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 455888888999999999999999987766432 122222334445555444321 13333333344444443
No 375
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=39.76 E-value=1.6e+02 Score=24.31 Aligned_cols=86 Identities=7% Similarity=0.030 Sum_probs=49.0
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+.+.++.+.. ......+.| -... .....+..++.++.
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~-~~~~~~~~D-v~d~-~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARD--AKNVSAAVDGLRAAG-HDVDGSSCD-VTST-DEVHAAVAAAVERF 99 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTT-CCEEEEECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcC-CcEEEEECC-CCCH-HHHHHHHHHHHHHc
Confidence 5566665433 234566777789999998853 223333333333322 233222322 2222 33455666777777
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 100 -g~id~lv~nAg~~ 112 (279)
T 3sju_A 100 -GPIGILVNSAGRN 112 (279)
T ss_dssp -CSCCEEEECCCCC
T ss_pred -CCCcEEEECCCCC
Confidence 6899999998864
No 376
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=39.61 E-value=90 Score=24.89 Aligned_cols=51 Identities=24% Similarity=0.255 Sum_probs=33.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCH--HHHHHHHHCCCEEEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM--ERRIVLRALGAEIIL 120 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~--~~~~~l~~~Ga~v~~ 120 (280)
+-+|+..+|.-|.++|......|.+++++...+.+. .....++..|.++..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~ 55 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVA 55 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEE
Confidence 447888889999999999999998877764433221 123345556665543
No 377
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=39.60 E-value=1e+02 Score=28.55 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=33.8
Q ss_pred CeEEEEeCCChHH---HHHHHHHHHcCCcEEEEeCCC-CCH---HHHHHHHHCCCEEE
Q 023565 69 KTTLIEVTSGNTG---VGLAFIAAARGYNLIIVMPST-CSM---ERRIVLRALGAEII 119 (280)
Q Consensus 69 ~~~vv~~SsGN~g---~alA~~a~~~G~~~~ivvp~~-~~~---~~~~~l~~~Ga~v~ 119 (280)
.+-+|.++.||.| ..+|...+..|+++.++++.. .+. ...+.++.+|.++.
T Consensus 53 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 53 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 3457778888877 444445556799999998753 232 34566777887664
No 378
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=39.54 E-value=91 Score=25.93 Aligned_cols=32 Identities=25% Similarity=0.383 Sum_probs=22.8
Q ss_pred eEEEEeCCChHH---HHHHHHHHHcCCcEEEEeCC
Q 023565 70 TTLIEVTSGNTG---VGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 70 ~~vv~~SsGN~g---~alA~~a~~~G~~~~ivvp~ 101 (280)
+-+|.++.||.| ..+|...+..|.++.++++.
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 446777888876 45555556679999998764
No 379
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=39.49 E-value=31 Score=29.96 Aligned_cols=29 Identities=21% Similarity=0.159 Sum_probs=26.7
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+|+..++|-.|.++|...++.|++++||=
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 38889999999999999999999999984
No 380
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=39.42 E-value=1.2e+02 Score=24.72 Aligned_cols=51 Identities=8% Similarity=0.105 Sum_probs=34.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHH-HHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l-~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|..-...|.+++++-.. +.+.+.+ +.+|.++..+.
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 60 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEFGPRVHALR 60 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCcceEEE
Confidence 456888888999999999999999987776533 2333332 34465555443
No 381
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=39.32 E-value=91 Score=25.61 Aligned_cols=53 Identities=9% Similarity=0.094 Sum_probs=34.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
..+|+..+|.-|+++|......|.+++++...... ......++..|.++..+.
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYA 81 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEE
Confidence 44777777888999999988999987776533322 122344455676665543
No 382
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=39.31 E-value=93 Score=25.51 Aligned_cols=54 Identities=22% Similarity=0.269 Sum_probs=34.7
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCC-CEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALG-AEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~G-a~v~~~~ 122 (280)
.+-+|+..+|--|.++|......|.+++++-..... ......++..| .++..+.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 66 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEE
Confidence 355778888889999999999999987776533211 12234455555 4555443
No 383
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=39.26 E-value=1.3e+02 Score=26.33 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=51.9
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.++-..+-|+.|.++|..++.+|++++++-+.... ..++. ... +. .+++++. +...+.-
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~--------~~~~~--~~~---sl-------~ell~~a-DvVil~v 230 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS--------GVDWI--AHQ---SP-------VDLARDS-DVLAVCV 230 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT--------TSCCE--ECS---SH-------HHHHHTC-SEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc--------ccCce--ecC---CH-------HHHHhcC-CEEEEeC
Confidence 35778888999999999999999987766544322 22332 111 22 2344444 4554432
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHH
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT 189 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~ 189 (280)
-.++.. ...+..++++++ +++.+++-++.|+..-
T Consensus 231 P~t~~t----~~li~~~~l~~m--k~gailIN~aRG~vvd 264 (340)
T 4dgs_A 231 AASAAT----QNIVDASLLQAL--GPEGIVVNVARGNVVD 264 (340)
T ss_dssp --------------CHHHHHHT--TTTCEEEECSCC----
T ss_pred CCCHHH----HHHhhHHHHhcC--CCCCEEEECCCCcccC
Confidence 222221 233456777887 4688999999998753
No 384
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=39.23 E-value=94 Score=26.09 Aligned_cols=16 Identities=0% Similarity=-0.332 Sum_probs=11.8
Q ss_pred CHHHHHHHHHHhhhcC
Q 023565 249 SHKIDLHLLHFCCCSS 264 (280)
Q Consensus 249 ~d~ea~~~~~~la~~e 264 (280)
+.+|+-+++.+|+.++
T Consensus 244 ~pedvA~~v~fL~s~~ 259 (296)
T 3k31_A 244 TLDDVGGAALYLLSDL 259 (296)
T ss_dssp CHHHHHHHHHHHHSGG
T ss_pred CHHHHHHHHHHHcCCc
Confidence 4578888888887753
No 385
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=39.20 E-value=1e+02 Score=24.92 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=35.0
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHH-HHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVL-RALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l-~~~Ga~v~~~~ 122 (280)
+-+|+..+|.-|.++|......|.+++++...... ......+ +.++.++..+.
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 70 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEE
Confidence 45888888999999999999999887777653322 2223333 33466665443
No 386
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=39.17 E-value=20 Score=30.91 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=30.3
Q ss_pred EEEEeCCChHHHHHHHHHH-HcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~-~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
.++..+||..+..++..+- .-|=+ |+++...-..-...++.+|++++.++..
T Consensus 87 ~i~~~~g~t~a~~~~~~~~~~~gd~--Vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 139 (367)
T 3euc_A 87 EVLLGNGSDEIISMLALAAARPGAK--VMAPVPGFVMYAMSAQFAGLEFVGVPLR 139 (367)
T ss_dssp EEEEEEHHHHHHHHHHHHTCCTTCE--EEEEESCSCCSCHHHHTTTCEEEEEECC
T ss_pred eEEEcCCHHHHHHHHHHHHcCCCCE--EEEcCCCHHHHHHHHHHcCCeEEEecCC
Confidence 4777777777776665543 12323 3333322222334577899999998743
No 387
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.78 E-value=77 Score=26.81 Aligned_cols=45 Identities=22% Similarity=0.049 Sum_probs=35.8
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v 118 (280)
+|...+.|+.|.++|......|.+++++ +.++.+.+.+...|+..
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~---dr~~~~~~~~~~~g~~~ 53 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGA---DLNPQACANLLAEGACG 53 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCSE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEE---ECCHHHHHHHHHcCCcc
Confidence 3777788999999999999999988877 33567777777777654
No 388
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=38.76 E-value=34 Score=27.71 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=27.7
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
|+...+|..|.++|...++.|++++++-..
T Consensus 6 VvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 889999999999999999999999998764
No 389
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=38.73 E-value=1.9e+02 Score=24.87 Aligned_cols=105 Identities=17% Similarity=0.126 Sum_probs=63.5
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (280)
.+|...+.|+.|.++|..++.+|++++++-+...... ....+|.+.. +.++ +.++. +.+.+.-
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~~------~l~e-------~l~~a-DvVi~~v 218 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPE---EAAEFQAEFV------STPE-------LAAQS-DFIVVAC 218 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHH---HHHTTTCEEC------CHHH-------HHHHC-SEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchh---HHHhcCceeC------CHHH-------HHhhC-CEEEEeC
Confidence 3477888899999999999999999887776543332 2345665432 1222 23333 4444432
Q ss_pred CCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchh--HHHHHHHHHh
Q 023565 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT--VTGAGRFLKE 197 (280)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~--~~Gi~~~~k~ 197 (280)
-.++.. ...+..++++.+ +++.+++-+++|+. ...+..++++
T Consensus 219 p~~~~t----~~~i~~~~~~~m--k~gailIn~srg~~v~~~aL~~aL~~ 262 (330)
T 2gcg_A 219 SLTPAT----EGLCNKDFFQKM--KETAVFINISRGDVVNQDDLYQALAS 262 (330)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHc
Confidence 222221 111224666776 45778899999854 4667777766
No 390
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=38.57 E-value=1.3e+02 Score=25.20 Aligned_cols=24 Identities=25% Similarity=0.155 Sum_probs=17.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGY 93 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~ 93 (280)
+-+||..+|.-|+++|......|.
T Consensus 35 ~~lVTGas~GIG~aia~~l~~~G~ 58 (287)
T 3rku_A 35 TVLITGASAGIGKATALEYLEASN 58 (287)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHT
T ss_pred EEEEecCCChHHHHHHHHHHHcCC
Confidence 557888888888888876655554
No 391
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=38.56 E-value=1.6e+02 Score=24.09 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=27.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~ 102 (280)
.+-+||..+|--|+++|..-...|.+++++-...
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPE 45 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4568888889999999999999999877765443
No 392
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=38.50 E-value=1.6e+02 Score=24.89 Aligned_cols=52 Identities=4% Similarity=-0.095 Sum_probs=37.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.++..+||..+..++..+- ..-.-.|+++...-..-...++..|++++.++.
T Consensus 84 ~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 135 (383)
T 3kax_A 84 WIVFSAGIVPALSTSIQAF-TKENESVLVQPPIYPPFFEMVTTNNRQLCVSPL 135 (383)
T ss_dssp GEEEESCHHHHHHHHHHHH-CCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC
T ss_pred hEEEcCCHHHHHHHHHHHh-CCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccc
Confidence 3777888888877766654 322345667766666677788899999999874
No 393
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=38.49 E-value=1.4e+02 Score=24.19 Aligned_cols=51 Identities=24% Similarity=0.242 Sum_probs=34.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH-HHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++-.. ..+.+ ..+.++.++..+.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 61 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAALAVA 61 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHhCCceEEEE
Confidence 355788888999999999999999987766433 23322 2334566555543
No 394
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=38.44 E-value=1.2e+02 Score=25.06 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=25.6
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
+-+|+..+|--|.++|......|.+++++..
T Consensus 30 ~vlITGasggIG~~la~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 30 KVIVTGASKGIGREMAYHLAKMGAHVVVTAR 60 (286)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 5578888899999999999999998777654
No 395
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=38.41 E-value=33 Score=28.89 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=25.9
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
|+.-.+|-.|.+.|..++++|+++++|=
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~V~liE 36 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLKTVMIE 36 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 7888999999999999999999999883
No 396
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=38.38 E-value=1.6e+02 Score=25.34 Aligned_cols=51 Identities=14% Similarity=0.093 Sum_probs=32.5
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
++..+||..+..++..+- .+-.-.|+++...-..-...++..|++++.++.
T Consensus 105 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 155 (407)
T 3nra_A 105 LIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFANRKLVEFFEGEMVPVQL 155 (407)
T ss_dssp EEEESHHHHHHHHHHHTT-CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEB
T ss_pred EEEeCCcHHHHHHHHHHh-CCCCCEEEEcCCcccchHHHHHHcCCEEEEeec
Confidence 777777777776665543 222234445444444566778889999988864
No 397
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=38.36 E-value=1.6e+02 Score=24.28 Aligned_cols=51 Identities=22% Similarity=0.143 Sum_probs=35.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH-HHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|..-...|.+++++-.. ..+.+ ..+.+|.++..+.
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 57 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVGVV 57 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTBTTEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHcCCcEEEEE
Confidence 455888888999999999999999887776432 23333 3345666665543
No 398
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=38.35 E-value=1.2e+02 Score=25.16 Aligned_cols=53 Identities=21% Similarity=0.267 Sum_probs=39.0
Q ss_pred eEEEEeCCChHHHHHHHHHHHcC-CcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G-~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
+-+|+..+|+.|.+++......| .+++++....... +...+...|.+++..|-
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-~~~~l~~~~~~~~~~D~ 60 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQ 60 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-HHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-HHHHHHHCCCEEEEecC
Confidence 45788888999999999888878 8888887654332 23445567888887764
No 399
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=38.34 E-value=1.1e+02 Score=27.77 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=36.0
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCc-EEEEeCCCC-----CHHHHHHHHHCCCEEEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTC-----SMERRIVLRALGAEIIL 120 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~-~~ivvp~~~-----~~~~~~~l~~~Ga~v~~ 120 (280)
++|+..++||.|.-+|..+.+.|.+ ++++..... ....+..++..|.+++.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~ 321 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIW 321 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEEC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEEe
Confidence 3489999999999999999999985 888764321 13334555666666544
No 400
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=38.34 E-value=1.1e+02 Score=24.92 Aligned_cols=32 Identities=28% Similarity=0.239 Sum_probs=26.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
.+-+|+..+|.-|+++|......|.+++++..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 35588888899999999999999998777654
No 401
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=38.33 E-value=1.4e+02 Score=24.21 Aligned_cols=54 Identities=19% Similarity=0.177 Sum_probs=34.6
Q ss_pred eEEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHH-CCC-EEEEECC
Q 023565 70 TTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LGA-EIILADS 123 (280)
Q Consensus 70 ~~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~-~Ga-~v~~~~~ 123 (280)
+-+|+..+ |.-|+++|......|.+++++-.........+.+.. .|. .++.+|-
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~ 68 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDV 68 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccC
Confidence 45777766 789999999999999987776544333344454433 343 3444443
No 402
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=38.31 E-value=1.1e+02 Score=27.22 Aligned_cols=51 Identities=18% Similarity=0.291 Sum_probs=36.1
Q ss_pred EEEeCC-ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHH----HHHCCCEEEEEC
Q 023565 72 LIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (280)
Q Consensus 72 vv~~Ss-GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----l~~~Ga~v~~~~ 122 (280)
|+..+. +|.++|++.+++++|++++++.|++- ++.-+.. .+..|+++..+.
T Consensus 156 va~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 213 (355)
T 4a8p_A 156 VVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 213 (355)
T ss_dssp EEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred EEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 444433 89999999999999999999999864 2332222 345688887765
No 403
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=38.27 E-value=1.4e+02 Score=24.65 Aligned_cols=51 Identities=12% Similarity=0.155 Sum_probs=34.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHH-HHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERR-IVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~-~~l~~~Ga~v~~~~ 122 (280)
.+-+||..+|--|+++|..-...|.+++++-.. ..+. +..+.+|.++..+.
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 79 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVN---EDAAVRVANEIGSKAFGVR 79 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCTTEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEE
Confidence 355888888999999999999999987776533 2322 23334566665543
No 404
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=38.27 E-value=1.5e+02 Score=23.65 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=46.4
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ . +..+...+..++.+......+.| -... .....+..++.++.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~--~-~~~~~~~~~~~~~~~~~~~~~~D-~~~~-~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATS--Q-ASAEKFENSMKEKGFKARGLVLN-ISDI-ESIQNFFAEIKAEN 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS--H-HHHHHHHHHHHHTTCCEEEEECC-TTCH-HHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC--H-HHHHHHHHHHHhcCCceEEEEec-CCCH-HHHHHHHHHHHHHc
Confidence 3444443322 234566777789999998853 2 22233333333332222222322 2222 23455666776666
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 81 -~~id~li~~Ag~~ 93 (247)
T 3lyl_A 81 -LAIDILVNNAGIT 93 (247)
T ss_dssp -CCCSEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 6799999999864
No 405
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=38.15 E-value=36 Score=29.72 Aligned_cols=132 Identities=14% Similarity=0.086 Sum_probs=69.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHH--------HHHHHHCCCEEEEECCCCCHHHHHHHH---HHHH
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMER--------RIVLRALGAEIILADSALRFEEILEKG---EEIL 138 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~--------~~~l~~~Ga~v~~~~~~~~~~~~~~~a---~~~~ 138 (280)
.+|..-++|-+|.++|..++..|++++++=+......+ +..+...|. .......++...+. ..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~----~~~~~~~~~~l~~i~~~~~l~ 82 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGS----LKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTC----CCSSSCHHHHHHTEEEECCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCC----CCCccCHHHHHhhcccccchH
Confidence 45888999999999999999999999988544211110 111111121 00000111111110 0111
Q ss_pred HhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhC--CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCCCcc
Q 023565 139 KKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG--GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSESAV 214 (280)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~~~~ 214 (280)
+.-.+.-++.. .-|.+.. +=.++++++. -++|+|+.+--|+=.++-++.+.+. .-|++|.-+.+.+.
T Consensus 83 ~a~~~ad~ViE-av~E~l~-----iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~---p~r~ig~HffNP~~ 151 (319)
T 3ado_A 83 EAVEGVVHIQE-CVPENLD-----LKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAH---VKQCIVAHPVNPPY 151 (319)
T ss_dssp HHTTTEEEEEE-CCCSCHH-----HHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTT---GGGEEEEEECSSTT
T ss_pred hHhccCcEEee-ccccHHH-----HHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccC---CCcEEEecCCCCcc
Confidence 11113333322 1233331 1224444442 2579999888888888777766532 34788888777653
No 406
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=38.03 E-value=92 Score=26.54 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=34.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCC--EEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGA--EIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga--~v~~~ 121 (280)
.+-+||..+|--|.++|......|.+++++...... ......++..|. ++..+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 64 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEE
Confidence 355888888999999999999999987776644221 122334444454 45444
No 407
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=38.00 E-value=70 Score=28.92 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=36.8
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~ 121 (280)
+|+..+.|..|...|..++.+|.+++++ +. .+.+++.++.+|++.+.+
T Consensus 192 kV~ViG~G~iG~~aa~~a~~lGa~V~v~-D~--~~~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 192 KIFVMGAGVAGLQAIATARRLGAVVSAT-DV--RPAAKEQVASLGAKFIAV 239 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE-CS--STTHHHHHHHTTCEECCC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEE-cC--CHHHHHHHHHcCCceeec
Confidence 4888899999999999999999976543 32 234667777899986544
No 408
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=37.97 E-value=61 Score=27.99 Aligned_cols=53 Identities=8% Similarity=-0.051 Sum_probs=35.2
Q ss_pred EEEEeCCChHHHHHHHH-HHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFI-AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~-a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.|+..+||..+..++.- ...++-.-.|+++...-..-...++..|++++.++.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 47888888888877742 222222234555555555667778889999999875
No 409
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=37.93 E-value=1.2e+02 Score=24.65 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=35.2
Q ss_pred CeEEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHH-CC-CEEEEECC
Q 023565 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LG-AEIILADS 123 (280)
Q Consensus 69 ~~~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~-~G-a~v~~~~~ 123 (280)
.+-+|+..+ |.-|+++|......|.+++++..........+.+.. +| ...+.+|-
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~ 67 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADV 67 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCC
Confidence 345777776 889999999988899987776544322334444433 34 44455553
No 410
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=37.88 E-value=34 Score=28.80 Aligned_cols=28 Identities=7% Similarity=0.199 Sum_probs=25.8
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
|+.-.+|-.|.+.|..+++.|++++++=
T Consensus 9 VvIIGaGpAGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 9 CAVIGAGPAGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 8888999999999999999999998884
No 411
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=37.86 E-value=29 Score=29.06 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=25.9
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
|+.-.+|-.|.+.|..++++|++++++-
T Consensus 7 vvIIG~GpAGl~AA~~la~~g~~v~liE 34 (314)
T 4a5l_A 7 VVIIGSGPAAHTAAIYLGRSSLKPVMYE 34 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 8888999999999999999999998874
No 412
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=37.83 E-value=1.3e+02 Score=24.29 Aligned_cols=51 Identities=12% Similarity=0.146 Sum_probs=33.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH-HHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIV-LRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|+++|......|.+++++... ..+... .+.+|.++..+.
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 58 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAELGERSMFVR 58 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHHCTTEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCceEEEE
Confidence 355788888999999999999999886665332 233322 233366665554
No 413
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=37.57 E-value=1.6e+02 Score=23.69 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=34.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|.-|.++|..-...|.+++++......... ..+.++.++..+.
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~ 64 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--QAKKLGNNCVFAP 64 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--HHHHHCTTEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH--HHHHhCCceEEEE
Confidence 456888888999999999999999988777654332222 2233355554443
No 414
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=37.57 E-value=1.3e+02 Score=26.63 Aligned_cols=50 Identities=22% Similarity=0.234 Sum_probs=38.6
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC------CCH----HHHHHHHHCCCEEEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPST------CSM----ERRIVLRALGAEIIL 120 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~------~~~----~~~~~l~~~Ga~v~~ 120 (280)
.++..++|+.|.-+|...+..|.+++++.+.. .++ ...+.++..|.+++.
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 206 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF 206 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe
Confidence 48888999999999999999999999998643 122 234556778887765
No 415
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=37.50 E-value=87 Score=27.33 Aligned_cols=52 Identities=13% Similarity=0.075 Sum_probs=34.1
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
++..+||..+..++..+- .+-.-.|+++...-......++.+|++++.++..
T Consensus 102 v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T 2x5d_A 102 AIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLV 153 (412)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECS
T ss_pred EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecC
Confidence 777788888777776653 2222345555544555666777889999888743
No 416
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=37.36 E-value=1.8e+02 Score=25.27 Aligned_cols=52 Identities=10% Similarity=0.045 Sum_probs=34.9
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.++..+||..+..++..+- .+-.-.|+++...-..-...++..|++++.++-
T Consensus 104 ~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~ 155 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNY-TEPGDEVLTADWYWGAYRVICSDTGRTLVTYSL 155 (418)
T ss_dssp EEEEESHHHHHHHHHHHHH-SCTTCEEEEESSCCTHHHHHHHHTTCEEEEECS
T ss_pred cEEECCchHHHHHHHHHHh-cCCCCEEEECCCCchhHHHHHHHcCCEEEEEee
Confidence 4788888888877776654 332234555554444555677889999999874
No 417
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=37.35 E-value=1e+02 Score=25.51 Aligned_cols=54 Identities=11% Similarity=0.187 Sum_probs=35.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCC-CC-HHHHHHHH-HCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-CS-MERRIVLR-ALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~-~~-~~~~~~l~-~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|+++|......|.+++++.... .. ......++ ..|.++..+.
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 80 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEE
Confidence 3557888888999999999888999877765432 11 11223344 5677665553
No 418
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=37.32 E-value=98 Score=25.67 Aligned_cols=30 Identities=20% Similarity=0.126 Sum_probs=25.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+-+|+..+|.-|+++|......|.+++++-
T Consensus 31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 31 IALVTGGSRGIGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 558888889999999999999998866654
No 419
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=37.28 E-value=21 Score=35.28 Aligned_cols=39 Identities=21% Similarity=0.366 Sum_probs=30.9
Q ss_pred HcCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 61 ~~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+.+.+++|.+-+|...+|.-|.+....|+.+|.++++..
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~ 377 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA 377 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 456678888855555569999999999999999877655
No 420
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=37.18 E-value=79 Score=24.77 Aligned_cols=49 Identities=12% Similarity=0.181 Sum_probs=37.4
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
-+|+..+|.-|.+++......|.+++++... +.+...+...+.+++..|
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D 51 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKE 51 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEecc
Confidence 3788888999999999999999998888754 345554444577777665
No 421
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=37.08 E-value=46 Score=24.61 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=19.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCc
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYN 94 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~ 94 (280)
++...++|+.|.+++......|.+
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~ 46 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYK 46 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCE
Confidence 477777899999988887667766
No 422
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=37.08 E-value=1.5e+02 Score=23.90 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=21.7
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
.+-+|+..+|--|+++|..-...|.+++++-
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTA 40 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3557777778888888877777777655543
No 423
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=36.94 E-value=44 Score=29.06 Aligned_cols=30 Identities=20% Similarity=0.328 Sum_probs=26.5
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
+|..-++|-.|+.++++|+.+|++++++-+
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 477778899999999999999999998864
No 424
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=36.89 E-value=1.2e+02 Score=24.45 Aligned_cols=17 Identities=6% Similarity=-0.048 Sum_probs=12.9
Q ss_pred eCHHHHHHHHHHhhhcC
Q 023565 248 VSHKIDLHLLHFCCCSS 264 (280)
Q Consensus 248 V~d~ea~~~~~~la~~e 264 (280)
.+.+|+.+++.+|+.++
T Consensus 214 ~~p~dva~~v~~L~s~~ 230 (248)
T 3op4_A 214 GDPREIASAVAFLASPE 230 (248)
T ss_dssp BCHHHHHHHHHHHHSGG
T ss_pred cCHHHHHHHHHHHcCCc
Confidence 45678888888888764
No 425
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=36.82 E-value=57 Score=27.84 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=33.4
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~ 117 (280)
+|...+.|+.|.++|......|.+++++-+ ++.+.+.+...|++
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr---~~~~~~~l~~~g~~ 66 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKNGFKVTVWNR---TLSKCDELVEHGAS 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS---SGGGGHHHHHTTCE
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHCCCe
Confidence 477788999999999999999998887643 23455556666764
No 426
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=36.72 E-value=1.2e+02 Score=25.26 Aligned_cols=32 Identities=16% Similarity=0.246 Sum_probs=26.6
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
+-+|+..+|.-|.++|......|.+++++...
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 55888888999999999999999987776543
No 427
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=36.67 E-value=92 Score=25.39 Aligned_cols=16 Identities=6% Similarity=-0.083 Sum_probs=11.4
Q ss_pred HHHHHHHHHHhhhcCC
Q 023565 250 HKIDLHLLHFCCCSSP 265 (280)
Q Consensus 250 d~ea~~~~~~la~~eG 265 (280)
.+|..+++.+|+.++.
T Consensus 235 ~~dva~~~~~l~s~~~ 250 (267)
T 3gdg_A 235 AKELKGAYVYFASDAS 250 (267)
T ss_dssp THHHHHHHHHHHSTTC
T ss_pred HHHHHhHhheeecCcc
Confidence 3678888888887643
No 428
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=36.65 E-value=69 Score=27.24 Aligned_cols=43 Identities=23% Similarity=0.224 Sum_probs=34.4
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~ 117 (280)
|.....|+.|.++|......|++++++ +.++.+.+.+...|+.
T Consensus 12 IgiIG~G~mG~~~A~~l~~~G~~V~~~---dr~~~~~~~~~~~g~~ 54 (306)
T 3l6d_A 12 VSVIGLGAMGTIMAQVLLKQGKRVAIW---NRSPGKAAALVAAGAH 54 (306)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE---CSSHHHHHHHHHHTCE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHCCCe
Confidence 667788999999999999999998876 3456677777766764
No 429
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.64 E-value=1.7e+02 Score=23.58 Aligned_cols=53 Identities=23% Similarity=0.166 Sum_probs=37.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH-HHHCCCEEEEECCC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIV-LRALGAEIILADSA 124 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~-l~~~Ga~v~~~~~~ 124 (280)
.+-+|+..+|.-|+++|......|.+++++... ..+... .+..|++.+.+|-+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~ 59 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVA 59 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCEEEEecCC
Confidence 355888888999999999999999988776543 233333 33457777777643
No 430
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=36.60 E-value=2.4e+02 Score=26.62 Aligned_cols=54 Identities=19% Similarity=0.120 Sum_probs=38.7
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 68 g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
|..-|||..++--|+++|......|.++++. ...........++..|.+++.+.
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~~~~~~~~i~~~g~~~~~~~ 375 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVN-DFKDATKTVDEIKAAGGEAWPDQ 375 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSSCCHHHHHHHHHTTCEEEEEC
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEE-eCccHHHHHHHHHhcCCeEEEEE
Confidence 3455777777888889999999999987664 32234455667777888887765
No 431
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=36.59 E-value=1.4e+02 Score=23.95 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=26.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
.+-+|+..+|.-|.++|......|.+++++..
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 35688888899999999999999998777654
No 432
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=36.54 E-value=1.8e+02 Score=24.02 Aligned_cols=51 Identities=18% Similarity=0.274 Sum_probs=36.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHH-HHHHHCCCEEEEEC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERR-IVLRALGAEIILAD 122 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~-~~l~~~Ga~v~~~~ 122 (280)
.+-+|+..+|--|.++|......|.+++++... ..+. ...+.++.++..+.
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 68 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRD---TRKGEAAARTMAGQVEVRE 68 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTTSSSEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcCCeeEEE
Confidence 456888888999999999999999887776533 2333 33345677776664
No 433
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=36.44 E-value=1.7e+02 Score=23.82 Aligned_cols=76 Identities=14% Similarity=0.182 Sum_probs=43.9
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCC
Q 023565 105 MERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGT 184 (280)
Q Consensus 105 ~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~ 184 (280)
....+.+...|++|+.+.... .+..+...+..++.+......+.| -... .....+..++.++. +.+|.+|..+|.
T Consensus 43 ~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D-~~~~-~~v~~~~~~~~~~~-g~id~li~nAg~ 117 (271)
T 4iin_A 43 AEIAKTLASMGLKVWINYRSN--AEVADALKNELEEKGYKAAVIKFD-AASE-SDFIEAIQTIVQSD-GGLSYLVNNAGV 117 (271)
T ss_dssp HHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHTTCCEEEEECC-TTCH-HHHHHHHHHHHHHH-SSCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHHHhcCCceEEEECC-CCCH-HHHHHHHHHHHHhc-CCCCEEEECCCc
Confidence 445667777899999987532 233333333333332333332332 2222 34455666777777 589999999886
Q ss_pred c
Q 023565 185 G 185 (280)
Q Consensus 185 G 185 (280)
.
T Consensus 118 ~ 118 (271)
T 4iin_A 118 V 118 (271)
T ss_dssp C
T ss_pred C
Confidence 4
No 434
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=36.35 E-value=1.6e+02 Score=24.44 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=26.5
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
.+-+|+..+|.-|.++|......|.+++++..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 35588888899999999999999998777654
No 435
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=36.32 E-value=1.8e+02 Score=23.96 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=32.9
Q ss_pred hHHHHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcCC--CcEEEEEeC
Q 023565 162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP--DIKVYGVEP 209 (280)
Q Consensus 162 t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p--~~~vigVe~ 209 (280)
....+++++.+++||+||+. +...+.|+..++++.+- ++.|+|.+.
T Consensus 176 ~~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~d~ 223 (313)
T 3m9w_A 176 KIMENALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQDA 223 (313)
T ss_dssp HHHHHHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCCSC
T ss_pred HHHHHHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEecCC
Confidence 34456665543579999886 45677799999998764 578888775
No 436
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=36.29 E-value=78 Score=26.43 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=34.8
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
|...+.|+.|.++|......|.+++++-. ++.+.+.++..|.++.
T Consensus 6 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r---~~~~~~~~~~~g~~~~ 50 (316)
T 2ew2_A 6 IAIAGAGAMGSRLGIMLHQGGNDVTLIDQ---WPAHIEAIRKNGLIAD 50 (316)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHCEEEE
T ss_pred EEEECcCHHHHHHHHHHHhCCCcEEEEEC---CHHHHHHHHhCCEEEE
Confidence 67778899999999999999998877643 3466777776676554
No 437
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=36.28 E-value=78 Score=26.24 Aligned_cols=53 Identities=19% Similarity=0.145 Sum_probs=33.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHCCCEEEEE
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILA 121 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~ 121 (280)
..-+||..+|--|+++|......|.+++++-..... ......++..|.++..+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 82 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGA 82 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 355777778888999999988999987776543211 22234455556554433
No 438
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=36.23 E-value=1.1e+02 Score=24.93 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=33.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~ 122 (280)
.-+|+..+|--|+++|..-...|.+++++-.. .. ...+.++.++..+.
T Consensus 11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~---~~~~~~~~~~~~~~ 58 (257)
T 3tl3_A 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIR--GE---DVVADLGDRARFAA 58 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEESS--CH---HHHHHTCTTEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc--hH---HHHHhcCCceEEEE
Confidence 55888888999999999999999988776542 12 22334566565543
No 439
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=36.17 E-value=1.8e+02 Score=23.90 Aligned_cols=87 Identities=15% Similarity=0.057 Sum_probs=48.7
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
|.++|.-.+. -....+.+...|++|+.++.. ..+...+.+.++.+.. ......+.| -... .....+..++.++.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~-~~~~~~~~~~~l~~~~-~~~~~~~~D-v~d~-~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN-AAERAQAVVSEIEQAG-GRAVAIRAD-NRDA-EAIEQAIRETVEAL 107 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTT-CCEEEEECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHHHhcC-CcEEEEECC-CCCH-HHHHHHHHHHHHHc
Confidence 5666665432 244567777789999988542 1222222333333322 333222332 2222 34456667788887
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 108 -g~iD~lvnnAg~~ 120 (271)
T 3v2g_A 108 -GGLDILVNSAGIW 120 (271)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCcEEEECCCCC
Confidence 5899999998853
No 440
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=36.14 E-value=90 Score=27.82 Aligned_cols=111 Identities=11% Similarity=0.052 Sum_probs=54.7
Q ss_pred cCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCCccHHHHHHhHHHHHHH
Q 023565 91 RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKIHYETTGPEIWQ 169 (280)
Q Consensus 91 ~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~ 169 (280)
+..|..++.-.+.-...-..++.+|-++.++.+...++...++..+..++ +-. .|...-.+|... ...-+.|.++
T Consensus 28 f~~p~~i~~G~g~l~~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~---~v~~~~~~~~ 103 (387)
T 3uhj_A 28 FGGPNKYIQRAGEIDKLAAYLAPLGKRALVLIDRVLFDALSERIGKSCGD-SLDIRFERFGGECCTS---EIERVRKVAI 103 (387)
T ss_dssp EECCSEEEECTTTTTTTHHHHGGGCSEEEEEECTTTHHHHHHHC-------CCEEEEEECCSSCSHH---HHHHHHHHHH
T ss_pred hcCCCeEEEcCCHHHHHHHHHHHcCCEEEEEECchHHHHHHHHHHHHHHc-CCCeEEEEcCCCCCHH---HHHHHHHHHh
Confidence 45566677766655555566677787776664433333334444444444 222 222222344321 1222334444
Q ss_pred hhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCC
Q 023565 170 DSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPS 210 (280)
Q Consensus 170 q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~ 210 (280)
+. ++| +|+++|||..+ -++++.... ..+++|.|-+.
T Consensus 104 ~~--~~d-~IIavGGGs~~-D~AK~iA~~-~~~p~i~IPTT 139 (387)
T 3uhj_A 104 EH--GSD-ILVGVGGGKTA-DTAKIVAID-TGARIVIAPTI 139 (387)
T ss_dssp HH--TCS-EEEEESSHHHH-HHHHHHHHH-TTCEEEECCSS
T ss_pred hc--CCC-EEEEeCCcHHH-HHHHHHHHh-cCCCEEEecCc
Confidence 43 366 57899887654 445544432 35677777654
No 441
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=36.09 E-value=1.6e+02 Score=24.23 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=33.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH-HHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~-~l~~~Ga~v~~~~ 122 (280)
+.+|+..+|--|+++|..-...|.+++++-.. ..+.+ ..+.++.++..+.
T Consensus 32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~ 82 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLA---AEKGKALADELGNRAEFVS 82 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHhCCceEEEE
Confidence 55888888999999999999999987665432 23322 2334566555443
No 442
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.06 E-value=1.8e+02 Score=23.73 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=43.2
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCC
Q 023565 105 MERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGT 184 (280)
Q Consensus 105 ~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~ 184 (280)
....+.+...|++|+.++.+ .+...+.+.++.+..+......+.| -... .....+..++.++. +.+|.+|..+|.
T Consensus 24 ~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~D-v~~~-~~v~~~~~~~~~~~-g~id~lvnnAg~ 98 (262)
T 3pk0_A 24 RGIATVFARAGANVAVAGRS--TADIDACVADLDQLGSGKVIGVQTD-VSDR-AQCDALAGRAVEEF-GGIDVVCANAGV 98 (262)
T ss_dssp HHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTSSSCEEEEECC-TTSH-HHHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhCCCcEEEEEcC-CCCH-HHHHHHHHHHHHHh-CCCCEEEECCCC
Confidence 34566777789999999853 2233333333332221222222322 2222 34455667777887 589999999885
Q ss_pred c
Q 023565 185 G 185 (280)
Q Consensus 185 G 185 (280)
.
T Consensus 99 ~ 99 (262)
T 3pk0_A 99 F 99 (262)
T ss_dssp C
T ss_pred C
Confidence 4
No 443
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=36.06 E-value=1.6e+02 Score=25.85 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=55.0
Q ss_pred CcEEEEeCCCCCHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCC-CCCccHHHHHHhHHHHHHHh
Q 023565 93 YNLIIVMPSTCSMERRIVLRALGA-EIILADSALRFEEILEKGEEILKKTPDGYLLRQF-ENPANPKIHYETTGPEIWQD 170 (280)
Q Consensus 93 ~~~~ivvp~~~~~~~~~~l~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~g~~t~~~Ei~~q 170 (280)
.|..++.-++.-...-..++.+|. ++.++.+.. .....++..+..++. +....+.. .||.. ....-+.+.+++
T Consensus 13 ~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~-~~~~~~~v~~~L~~~-~~~~f~~v~~~p~~---~~v~~~~~~~~~ 87 (358)
T 3jzd_A 13 HAARVVFGAGSSSQVAAEVERLGAKRALVLCTPN-QQAEAERIADLLGPL-SAGVYAGAVMHVPI---ESARDATARARE 87 (358)
T ss_dssp CCEEEEESTTGGGGHHHHHHHTTCSCEEEECCGG-GHHHHHHHHHHHGGG-EEEEECCCCTTCBH---HHHHHHHHHHHH
T ss_pred CCceEEECCCHHHHHHHHHHHhCCCeEEEEeCCc-HHHHHHHHHHHhccC-CEEEecCCcCCCCH---HHHHHHHHHhhc
Confidence 455666666655555566777874 565554322 233445555555543 33222221 23321 112223344444
Q ss_pred hCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEeCCC
Q 023565 171 SGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGVEPSE 211 (280)
Q Consensus 171 ~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigVe~~~ 211 (280)
. ++| +|+++|||+.+ -+++++... ...++|.|-+..
T Consensus 88 ~--~~D-~IIavGGGsvi-D~aK~iA~~-~~~p~i~IPTT~ 123 (358)
T 3jzd_A 88 A--GAD-CAVAVGGGSTT-GLGKAIALE-TGMPIVAIPTTY 123 (358)
T ss_dssp H--TCS-EEEEEESHHHH-HHHHHHHHH-HCCCEEEEECSS
T ss_pred c--CCC-EEEEeCCcHHH-HHHHHHHhc-cCCCEEEEeCCc
Confidence 3 467 67889877654 444444332 345677776654
No 444
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=36.01 E-value=1.5e+02 Score=23.57 Aligned_cols=53 Identities=19% Similarity=0.110 Sum_probs=33.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCC-------cEEEEeCCCCC-HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGY-------NLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~-------~~~ivvp~~~~-~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|--|.++|......|. +++++...... ......++..|.++..+.
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 64 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEE
Confidence 457888889999999999888898 55554432111 112233445677776654
No 445
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=35.91 E-value=80 Score=27.92 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=33.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHH-CCCEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LGAEI 118 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~-~Ga~v 118 (280)
+++..+.|+.|.++|..++.+|.+++++-+ ++.+++.++. +|+.+
T Consensus 170 ~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~---~~~~l~~~~~~~g~~~ 215 (377)
T 2vhw_A 170 DVVVIGAGTAGYNAARIANGMGATVTVLDI---NIDKLRQLDAEFCGRI 215 (377)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHHHHhcCCee
Confidence 477777899999999999999997555433 3455555554 78764
No 446
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=35.91 E-value=73 Score=27.56 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=31.2
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEECC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS 123 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~~ 123 (280)
++..+||..+..++..+. ..-.-.|+++...- ..-...++..|++++.++.
T Consensus 67 v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 119 (411)
T 3nnk_A 67 MLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV 119 (411)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEec
Confidence 666666777776666654 32223444444332 2256677889999998874
No 447
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=35.82 E-value=51 Score=27.94 Aligned_cols=32 Identities=31% Similarity=0.359 Sum_probs=22.1
Q ss_pred eEEEEeCCChHH---HHHHHHHHHcCCcEEEEeCC
Q 023565 70 TTLIEVTSGNTG---VGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 70 ~~vv~~SsGN~g---~alA~~a~~~G~~~~ivvp~ 101 (280)
+-+|.++.||.| .++|...+..|+++.|+++.
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 446777778776 45555556678888888764
No 448
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=35.75 E-value=1.8e+02 Score=23.93 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=23.7
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 68 g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
|.+-+||..+|--|+++|..-...|.+++++-
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~ 45 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVS 45 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34557777778888888888877887766654
No 449
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=35.73 E-value=82 Score=26.38 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=25.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEe
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivv 99 (280)
+|...+.|+.|.++|..++..|++++++-
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 36777889999999999999999887763
No 450
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=35.72 E-value=2.2e+02 Score=24.73 Aligned_cols=106 Identities=21% Similarity=0.165 Sum_probs=63.7
Q ss_pred eEEEEeCCChHHHHHHHHHH-HcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcC
Q 023565 70 TTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLR 148 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~-~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 148 (280)
.+|...+-|+.|.++|..++ .+|++++++-+....... ...+|++. +. +.++ +.++. +.+.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~---~~~~g~~~--~~---~l~e-------ll~~a-DvVil~ 227 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAET---EKALGAER--VD---SLEE-------LARRS-DCVSVS 227 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH---HHHHTCEE--CS---SHHH-------HHHHC-SEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhh---HhhcCcEE--eC---CHHH-------HhccC-CEEEEe
Confidence 34778888999999999999 999987766554333332 23456653 22 2222 23333 455543
Q ss_pred CCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 023565 149 QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (280)
Q Consensus 149 ~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~--~Gi~~~~k~ 197 (280)
--.++.. ...+..++++.+ +++.+++-+++|+.. ..+..++++
T Consensus 228 vp~~~~t----~~li~~~~l~~m--k~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 228 VPYMKLT----HHLIDEAFFAAM--KPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp CCCSGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCCChHH----HHHhhHHHHhcC--CCCCEEEECCCCchhCHHHHHHHHHh
Confidence 3222211 112233666776 468899999999653 566777765
No 451
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=35.67 E-value=1e+02 Score=27.70 Aligned_cols=52 Identities=15% Similarity=0.179 Sum_probs=33.2
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH----HHHHCCCEEEEECCC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI----VLRALGAEIILADSA 124 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~----~l~~~Ga~v~~~~~~ 124 (280)
.+..+||..+..++..+- +.-.-.|+++...-..... .++.+|++++.++..
T Consensus 100 ~v~~~sG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~ 155 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTL-ARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM 155 (430)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 566677776666655543 3333456666655444444 667899999999864
No 452
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=35.64 E-value=62 Score=27.80 Aligned_cols=53 Identities=17% Similarity=0.223 Sum_probs=36.6
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.++..+||..+..+|..+...+-.-.|++|...-......++..|++++.++.
T Consensus 52 ~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~ 104 (367)
T 3nyt_A 52 YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDI 104 (367)
T ss_dssp EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECB
T ss_pred cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHcCCEEEEEec
Confidence 37777888877766666543333345666666655666778889999999874
No 453
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=35.52 E-value=61 Score=28.30 Aligned_cols=54 Identities=17% Similarity=0.092 Sum_probs=32.9
Q ss_pred EEEEeCCChHHHHHHHHHHH---cCCcEEEEeCCCCCHHHHHH---HHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAA---RGYNLIIVMPSTCSMERRIV---LRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~---~G~~~~ivvp~~~~~~~~~~---l~~~Ga~v~~~~~~ 124 (280)
.++..+||..+..++..+-. .+-.-.|+++...-...... ++..|++++.++..
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 146 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ 146 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC
Confidence 37777888888777766544 12223455555444443333 36679999999753
No 454
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.46 E-value=1.1e+02 Score=25.32 Aligned_cols=32 Identities=31% Similarity=0.321 Sum_probs=26.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
.+-+|+..+|.-|+++|......|.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 35578888899999999999999998777654
No 455
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=35.43 E-value=1.2e+02 Score=26.76 Aligned_cols=52 Identities=23% Similarity=0.297 Sum_probs=38.2
Q ss_pred EEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCC--CHHHHHH----HHHCCCEEEEEC
Q 023565 71 TLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (280)
Q Consensus 71 ~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~--~~~~~~~----l~~~Ga~v~~~~ 122 (280)
+|+..+. +|.++++..+++++|++++++.|+.- ++..+.. .+..|+++..+.
T Consensus 183 ~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~ 242 (358)
T 4h31_A 183 QFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTE 242 (358)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceecc
Confidence 3555554 58999999999999999999999763 3333333 345789998886
No 456
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=35.41 E-value=92 Score=24.96 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=25.9
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
+-+|+..+|.-|.++|......|.+++++..
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 4588888899999999999999988777654
No 457
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=35.40 E-value=72 Score=28.47 Aligned_cols=52 Identities=12% Similarity=-0.024 Sum_probs=37.7
Q ss_pred EEEeCCChHHHHHHHHHHH---------cCC---cEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 72 LIEVTSGNTGVGLAFIAAA---------RGY---NLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~---------~G~---~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
++..+||..+..+|..+.. -|+ +-.|++|. .-..-...++.+|++++.++..
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~ 169 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR 169 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC
Confidence 6677777777777765532 453 24677888 7777778889999999999753
No 458
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=35.34 E-value=2.1e+02 Score=24.36 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=30.9
Q ss_pred HHHHHhhCCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEeCC
Q 023565 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVYGVEPS 210 (280)
Q Consensus 165 ~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~----p~~~vigVe~~ 210 (280)
.+++++ .++||+|||. +..++.|+..++++.+ .++.|+|.+-.
T Consensus 260 ~~ll~~-~~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD~~ 306 (366)
T 3h5t_A 260 KELLET-HPDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFDGT 306 (366)
T ss_dssp HHHHHH-CTTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred HHHHcC-CCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEECCC
Confidence 344443 3579999985 4567779999999876 36889998853
No 459
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=35.33 E-value=66 Score=27.73 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=30.8
Q ss_pred EEEEeCCChHHHHHHHHHHH-cCCcEEEEeCCCC-CHHH-HHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTC-SMER-RIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~~~-~~~~-~~~l~~~Ga~v~~~~~ 123 (280)
.++..+||..+..++..+-. -|- .|+++... +... ...++..|++++.++.
T Consensus 71 ~v~~~~g~t~al~~~~~~~~~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 124 (396)
T 2ch1_A 71 TMCVSGSAHAGMEAMLSNLLEEGD--RVLIAVNGIWAERAVEMSERYGADVRTIEG 124 (396)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEECCcHHHHHHHHHHHhcCCCC--eEEEEcCCcccHHHHHHHHHcCCceEEecC
Confidence 37777777777777666542 232 33443322 2222 3467889999998874
No 460
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=35.20 E-value=2e+02 Score=24.06 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=48.9
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+...+...++........++ +.| -... .....+..++.++.
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~-~~D-v~d~-~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVD--QPALEQAVNGLRGQGFDAHGV-VCD-VRHL-DEMVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-ECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCceEEE-Ecc-CCCH-HHHHHHHHHHHHhC
Confidence 5666665433 245567777889999999854 223333333333332222222 322 2222 23455666777777
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|.+
T Consensus 107 -g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 -GGVDVVFSNAGIV 119 (301)
T ss_dssp -SSCSEEEECCCCC
T ss_pred -CCCCEEEECCCcC
Confidence 5899999999854
No 461
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=35.10 E-value=45 Score=28.83 Aligned_cols=52 Identities=6% Similarity=0.116 Sum_probs=33.5
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
++..+||..+..++..+-. .-.-.|+++...-......++.+|++++.++..
T Consensus 93 v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 144 (388)
T 1j32_A 93 ILVTNGGKQSIFNLMLAMI-EPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTT 144 (388)
T ss_dssp EEEESHHHHHHHHHHHHHC-CTTCEEEEESSCCTHHHHHHHHTTCEEEEECCC
T ss_pred EEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCEEEEecCC
Confidence 7777777888777766542 222244554444444556778899999998753
No 462
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=35.04 E-value=1.9e+02 Score=23.74 Aligned_cols=87 Identities=10% Similarity=0.139 Sum_probs=48.1
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+..... + .+..+...+..++.+......+.| -... .....+..++.++.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~D-~~d~-~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYAS-S-AGAADEVVAAIAAAGGEAFAVKAD-VSQE-SEVEALFAAVIERW 104 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-C-HHHHHHHHHHHHHTTCCEEEEECC-TTSH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-C-hHHHHHHHHHHHhcCCcEEEEECC-CCCH-HHHHHHHHHHHHHc
Confidence 4455544332 234567777889999887642 2 233333333333332333222332 2222 34456677788887
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 105 -g~id~lv~nAg~~ 117 (269)
T 4dmm_A 105 -GRLDVLVNNAGIT 117 (269)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 6899999998864
No 463
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=34.99 E-value=78 Score=27.67 Aligned_cols=84 Identities=19% Similarity=0.081 Sum_probs=47.1
Q ss_pred HHHHHHHHCCC-EEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHH---hhCCCCCEEEEe
Q 023565 106 ERRIVLRALGA-EIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ---DSGGKVDAFISG 181 (280)
Q Consensus 106 ~~~~~l~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~---q~~~~~d~vv~~ 181 (280)
.-++..+.+|+ +|+.++.+ ++..+.++++ +.-.+..+.+.. ...++.+ ..++.+|.|+-+
T Consensus 197 ~aiqlak~~Ga~~Vi~~~~~---~~~~~~a~~l-----Ga~~vi~~~~~~--------~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 197 LTVQLARLAGATTVILSTRQ---ATKRRLAEEV-----GATATVDPSAGD--------VVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp HHHHHHHHTTCSEEEEECSC---HHHHHHHHHH-----TCSEEECTTSSC--------HHHHHHSTTSSSTTCEEEEEEC
T ss_pred HHHHHHHHcCCCEEEEECCC---HHHHHHHHHc-----CCCEEECCCCcC--------HHHHHHhhhhccCCCCCEEEEC
Confidence 45777788999 88888754 3444444443 222222222222 1123333 333469999999
Q ss_pred cCCchhHHHHHHHHHhcCCCcEEEEEe
Q 023565 182 IGTGGTVTGAGRFLKENNPDIKVYGVE 208 (280)
Q Consensus 182 vG~Gg~~~Gi~~~~k~~~p~~~vigVe 208 (280)
+|++.++. .+++.+.+.-+++-+-
T Consensus 261 ~G~~~~~~---~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 261 AGVAETVK---QSTRLAKAGGTVVILG 284 (370)
T ss_dssp SCCHHHHH---HHHHHEEEEEEEEECS
T ss_pred CCCHHHHH---HHHHHhccCCEEEEEe
Confidence 98776543 3455556666666553
No 464
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=34.86 E-value=1.8e+02 Score=23.48 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=27.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
..-+||..+|--|.++|..-...|.+++++-..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455888888999999999999999997776543
No 465
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=34.65 E-value=1.3e+02 Score=24.81 Aligned_cols=86 Identities=10% Similarity=0.151 Sum_probs=48.4
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+. +...+.+.++........++ +.| -... .....+..++.++.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~-~~D-l~d~-~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHS--DALQVVADEIAGVGGKALPI-RCD-VTQP-DQVRGMLDQMTGEL 107 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG--GGGHHHHHHHHHTTCCCEEE-ECC-TTCH-HHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhcCCeEEEE-EcC-CCCH-HHHHHHHHHHHHHc
Confidence 5566665432 2445667777899999987542 22222333333322222222 222 2222 23456667777777
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|..
T Consensus 108 -g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 108 -GGIDIAVCNAGIV 120 (276)
T ss_dssp -SCCSEEEECCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 5899999998854
No 466
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=34.58 E-value=57 Score=28.02 Aligned_cols=93 Identities=6% Similarity=0.014 Sum_probs=50.9
Q ss_pred EEEEeCC-CCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCC
Q 023565 95 LIIVMPS-TCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG 173 (280)
Q Consensus 95 ~~ivvp~-~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~ 173 (280)
.+++... ..-..-.+.++.+|++|+.++.+ ++..+.+ ++.+-...++ +.+.. ...++.+.. +
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~----~~lGa~~~i~-~~~~~--------~~~~~~~~~-g 231 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMGLRVAAVDID---DAKLNLA----RRLGAEVAVN-ARDTD--------PAAWLQKEI-G 231 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEESC---HHHHHHH----HHTTCSEEEE-TTTSC--------HHHHHHHHH-S
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHH----HHcCCCEEEe-CCCcC--------HHHHHHHhC-C
Confidence 3444433 23345677888999999998754 3444444 3332222232 22221 122333323 4
Q ss_pred CCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEE
Q 023565 174 KVDAFISGIGTGGTVTGAGRFLKENNPDIKVYGV 207 (280)
Q Consensus 174 ~~d~vv~~vG~Gg~~~Gi~~~~k~~~p~~~vigV 207 (280)
.+|.++.++|++.++.- +++.+.|.-+++-+
T Consensus 232 ~~d~vid~~g~~~~~~~---~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTAVSPKAFSQ---AIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESSCCHHHHHH---HHHHEEEEEEEEEC
T ss_pred CCCEEEEeCCCHHHHHH---HHHHhccCCEEEEe
Confidence 78999999988766543 44555555566544
No 467
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=34.55 E-value=1.7e+02 Score=24.00 Aligned_cols=85 Identities=12% Similarity=0.133 Sum_probs=47.7
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCCccHHHHHHhHHHHHHHh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKIHYETTGPEIWQD 170 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~q 170 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .....+...++.+..... ++.....+ . .....+..++.++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d---~-~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATT--EAGAEGIGAAFKQAGLEGRGAVLNVND---A-TAVDALVESTLKE 102 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS--HHHHHHHHHHHHHHTCCCEEEECCTTC---H-HHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEEEEeCCC---H-HHHHHHHHHHHHH
Confidence 5555554332 234566777789999998853 222323333333332222 22222222 2 2445666778888
Q ss_pred hCCCCCEEEEecCCc
Q 023565 171 SGGKVDAFISGIGTG 185 (280)
Q Consensus 171 ~~~~~d~vv~~vG~G 185 (280)
. +.+|.+|..+|..
T Consensus 103 ~-g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 103 F-GALNVLVNNAGIT 116 (270)
T ss_dssp H-SCCCEEEECCCCC
T ss_pred c-CCCCEEEECCCCC
Confidence 7 5899999998853
No 468
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=34.55 E-value=1.4e+02 Score=26.69 Aligned_cols=51 Identities=20% Similarity=0.253 Sum_probs=38.4
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-----CH----HHHHHHHHCCCEEEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-----SM----ERRIVLRALGAEIIL 120 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-----~~----~~~~~l~~~Ga~v~~ 120 (280)
.+++...+|..|.-+|...+.+|.+++++.+... ++ ...+.++..|.+++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 3488889999999999999999999999976432 22 234556777877654
No 469
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=34.52 E-value=1.2e+02 Score=27.39 Aligned_cols=50 Identities=14% Similarity=0.195 Sum_probs=37.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC-----C----HHHHHHHHHCCCEEE
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-----S----MERRIVLRALGAEII 119 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~-----~----~~~~~~l~~~Ga~v~ 119 (280)
..++...+|..|.-+|...+.+|.+++++.+... + ....+.++..|.+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK 242 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 3488889999999999999999999999975432 1 223455667777664
No 470
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=34.49 E-value=1.2e+02 Score=25.20 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=40.5
Q ss_pred eEEEEeCC--ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHH-CC-CEEEEECCCCCHHHHHHHHHHHHHh
Q 023565 70 TTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LG-AEIILADSALRFEEILEKGEEILKK 140 (280)
Q Consensus 70 ~~vv~~Ss--GN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~ 140 (280)
+-+|+..+ |.-|+++|......|.+++++............++. .| ..++.+|-+ +.++..+...+..++
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVS-LDEDIKNLKKFLEEN 96 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 45777766 789999999999999988777644323334444543 34 344444532 333333333444443
No 471
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=34.48 E-value=72 Score=28.98 Aligned_cols=51 Identities=18% Similarity=0.018 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
|++.+.+..+.+ .|.--.| .+++..+.||-|..+|.....+|.+++.+.+.
T Consensus 191 ~Gv~~~~~~~~~~~g~~l~g-k~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 191 FGVAVATREMAKKLWGGIEG-KTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-CEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCcCC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 567776665543 4432233 45888888999999998888888888866654
No 472
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=34.43 E-value=75 Score=27.78 Aligned_cols=53 Identities=19% Similarity=0.120 Sum_probs=36.6
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.++..++|..+..++..+-..+-.-.|++|...-..-...++..|++++.++.
T Consensus 55 ~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~ 107 (377)
T 3ju7_A 55 AVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWCGLEPYFIDI 107 (377)
T ss_dssp EEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHHTTCEEEEECB
T ss_pred eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 37778888887777766543333345666665555566778889999999874
No 473
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=34.19 E-value=82 Score=28.10 Aligned_cols=14 Identities=14% Similarity=0.240 Sum_probs=9.0
Q ss_pred CCCEEEEecCCchh
Q 023565 174 KVDAFISGIGTGGT 187 (280)
Q Consensus 174 ~~d~vv~~vG~Gg~ 187 (280)
..|.||.++|.+..
T Consensus 227 ~aDvVi~at~~~~~ 240 (404)
T 1gpj_A 227 RSDVVVSATAAPHP 240 (404)
T ss_dssp TCSEEEECCSSSSC
T ss_pred CCCEEEEccCCCCc
Confidence 35777777765543
No 474
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=34.05 E-value=40 Score=29.44 Aligned_cols=30 Identities=23% Similarity=0.463 Sum_probs=27.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
.|+...+|-.|.++|+.+++.|++++|+=.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 489999999999999999999999888753
No 475
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=33.81 E-value=1.2e+02 Score=22.68 Aligned_cols=48 Identities=13% Similarity=0.028 Sum_probs=29.9
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~ 119 (280)
++.+........+.-.|...|++.+++.+.....+..+..+..|.+++
T Consensus 81 vvi~vp~~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 81 VDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIV 128 (144)
T ss_dssp EEECSCHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred EEEEeCHHHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCEEE
Confidence 455555566666666677777776665555555566666666676643
No 476
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=33.74 E-value=1e+02 Score=25.35 Aligned_cols=43 Identities=23% Similarity=-0.030 Sum_probs=32.3
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~ 117 (280)
|...+.|+.|.++|......|.+++++- .++.+.+.++.+|..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~---~~~~~~~~~~~~g~~ 45 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVS---RQQSTCEKAVERQLV 45 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTSC
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHhCCCC
Confidence 5566789999999999999998766653 235666667777763
No 477
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=33.73 E-value=42 Score=28.59 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=27.8
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
.|+...+|-.|.++|+.+++.|++++|+=..
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4899999999999999999999999888644
No 478
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=33.73 E-value=84 Score=25.59 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=34.2
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEEC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~ 122 (280)
+-+|+..+|--|+++|..-...|.+++++...... ......++..|.++..+.
T Consensus 9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (264)
T 3i4f_A 9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63 (264)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEE
T ss_pred EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEE
Confidence 45777777888999999988999988877554322 122233344555565543
No 479
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=33.67 E-value=2.3e+02 Score=24.95 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=24.0
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
+|+..++|..|+.++.+++.+|++++++-+.
T Consensus 21 ~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~ 51 (433)
T 2dwc_A 21 KILLLGSGELGKEIAIEAQRLGVEVVAVDRY 51 (433)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4666677888888888888888888777653
No 480
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=33.57 E-value=68 Score=27.45 Aligned_cols=44 Identities=23% Similarity=0.165 Sum_probs=35.3
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v 118 (280)
|---.-|++|..+|..-.+.|++++++ +.++.+.+.+...|+++
T Consensus 6 IgfIGlG~MG~~mA~~L~~~G~~v~v~---dr~~~~~~~l~~~Ga~~ 49 (300)
T 3obb_A 6 IAFIGLGHMGAPMATNLLKAGYLLNVF---DLVQSAVDGLVAAGASA 49 (300)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEE---CSSHHHHHHHHHTTCEE
T ss_pred EEEeeehHHHHHHHHHHHhCCCeEEEE---cCCHHHHHHHHHcCCEE
Confidence 555566999999999999999999887 45678888888777754
No 481
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=33.49 E-value=2.8e+02 Score=31.29 Aligned_cols=57 Identities=19% Similarity=0.290 Sum_probs=42.1
Q ss_pred CCCCeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC--C---HHHHHHHHHCCCEEEEEC
Q 023565 66 TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--S---MERRIVLRALGAEIILAD 122 (280)
Q Consensus 66 ~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~--~---~~~~~~l~~~Ga~v~~~~ 122 (280)
.++.+-+|+..+|--|+++|..-...|.+.++++..+. . ...++.++..|+++..+.
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~ 1943 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVST 1943 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEe
Confidence 45567788888899999999999999998777765432 2 234556677899987765
No 482
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=33.32 E-value=1.8e+02 Score=23.03 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=26.2
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
.+-+|+..+|.-|.++|......|.+++++..
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 35578888899999999999899998777654
No 483
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=33.23 E-value=39 Score=29.90 Aligned_cols=50 Identities=20% Similarity=0.110 Sum_probs=38.3
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC------CH----HHHHHHHHCCCEEEEE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC------SM----ERRIVLRALGAEIILA 121 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~------~~----~~~~~l~~~Ga~v~~~ 121 (280)
++...+|..|.-+|...+..|.+++++.+... ++ ...+.++..|.+++.-
T Consensus 149 vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~ 208 (385)
T 3klj_A 149 AFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTN 208 (385)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECS
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeC
Confidence 88899999999999999999999999965421 22 2345567778877653
No 484
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=33.09 E-value=1.2e+02 Score=26.98 Aligned_cols=77 Identities=17% Similarity=0.153 Sum_probs=41.9
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHH----HHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEc
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL----RALGAEIILADSALRFEEILEKGEEILKKTPDGYLL 147 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l----~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 147 (280)
++..+||..+..++..+. +.-.-.|+++...-......+ +.+|++++.++.. +.+ .++. ...++...+++
T Consensus 99 ~~~~~sG~~Ai~~al~~l-~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~-~l~~---ai~~~t~~v~l 172 (414)
T 3ndn_A 99 AFATASGMAAVFTSLGAL-LGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-DLS-QWER---ALSVPTQAVFF 172 (414)
T ss_dssp EEEESSHHHHHHHHHHTT-CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-CHH-HHHH---HTSSCCSEEEE
T ss_pred EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-CHH-HHHH---hcCCCCeEEEE
Confidence 677788877766555443 222234555554444443333 5599999999854 332 2222 22333456776
Q ss_pred CCCCCCc
Q 023565 148 RQFENPA 154 (280)
Q Consensus 148 ~~~~~~~ 154 (280)
....||.
T Consensus 173 e~p~Npt 179 (414)
T 3ndn_A 173 ETPSNPM 179 (414)
T ss_dssp ESSCTTT
T ss_pred ECCCCCC
Confidence 5545553
No 485
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=33.01 E-value=59 Score=28.76 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=38.2
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCC------CH----HHHHHHHHCCCEEEE
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC------SM----ERRIVLRALGAEIIL 120 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~------~~----~~~~~l~~~Ga~v~~ 120 (280)
.++...+|+.|.-+|...+.+|.+++++.+... ++ ...+.++..|.+++.
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 213 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRT 213 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEE
Confidence 488889999999999999999999999875432 22 234556677877764
No 486
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=33.00 E-value=2.1e+02 Score=24.57 Aligned_cols=51 Identities=8% Similarity=0.082 Sum_probs=30.3
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHH--HHHHHHHCCCEEEEECC
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSME--RRIVLRALGAEIILADS 123 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~--~~~~l~~~Ga~v~~~~~ 123 (280)
++..+||..+..++..+- ..-.-.|+++...-.. -...++..|++++.++.
T Consensus 65 ~~~~~s~t~al~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (416)
T 3isl_A 65 YPIDGTSRAGIEAVLASV-IEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLEC 117 (416)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEecCcHHHHHHHHHHHh-cCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEec
Confidence 446666767776666554 3322344444433222 45567889999999874
No 487
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=32.67 E-value=70 Score=27.32 Aligned_cols=52 Identities=15% Similarity=0.126 Sum_probs=32.3
Q ss_pred EEEEeCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCC
Q 023565 71 TLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~ 124 (280)
.++..+||..+..++..+-. -|-+ |+++...-..-...++..|++++.++..
T Consensus 83 ~i~~t~g~~~a~~~~~~~~~~~gd~--vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 135 (377)
T 3fdb_A 83 WIFPIPDVVRGLYIAIDHFTPAQSK--VIVPTPAYPPFFHLLSATQREGIFIDAT 135 (377)
T ss_dssp GEEEESCHHHHHHHHHHHHSCTTCC--EEEEESCCTHHHHHHHHHTCCEEEEECT
T ss_pred HEEEeCChHHHHHHHHHHhcCCCCE--EEEcCCCcHhHHHHHHHcCCEEEEccCC
Confidence 37777888887776665542 2333 3333333334556678889999988753
No 488
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=32.65 E-value=2e+02 Score=23.43 Aligned_cols=87 Identities=15% Similarity=0.078 Sum_probs=47.6
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.+... . .+..+...+..++.+......+.| -... .....+..++.++.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~D-v~~~-~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN-S-TKDAEKVVSEIKALGSDAIAIKAD-IRQV-PEIVKLFDQAVAHF 94 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS-C-HHHHHHHHHHHHHTTCCEEEEECC-TTSH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-C-HHHHHHHHHHHHhcCCcEEEEEcC-CCCH-HHHHHHHHHHHHHc
Confidence 4555554332 234566777889999987542 1 222333333333332322222332 2222 34456677788887
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|-.+|..
T Consensus 95 -g~id~lvnnAg~~ 107 (270)
T 3is3_A 95 -GHLDIAVSNSGVV 107 (270)
T ss_dssp -SCCCEEECCCCCC
T ss_pred -CCCCEEEECCCCC
Confidence 5899999988853
No 489
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=32.63 E-value=1.4e+02 Score=25.18 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=27.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS 104 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~ 104 (280)
.+|.|.+.|.+...+...+...|.+.+|++.++.|
T Consensus 111 ~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP 145 (276)
T 1vb5_A 111 DVIITHSFSSTVLEIIRTAKERKKRFKVILTESSP 145 (276)
T ss_dssp EEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCc
Confidence 44888888888888888888778888888866543
No 490
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=32.57 E-value=2e+02 Score=23.26 Aligned_cols=149 Identities=13% Similarity=0.085 Sum_probs=74.8
Q ss_pred HHHHHHHHHcCCCCCCCeEEEEeCCC-hHHHHHHHHHHHcCCcEEEEeCC--C---C-----CHH-----H-HHHHHHCC
Q 023565 53 YSMIKDAEDKGLITPGKTTLIEVTSG-NTGVGLAFIAAARGYNLIIVMPS--T---C-----SME-----R-RIVLRALG 115 (280)
Q Consensus 53 ~~~l~~a~~~g~~~~g~~~vv~~SsG-N~g~alA~~a~~~G~~~~ivvp~--~---~-----~~~-----~-~~~l~~~G 115 (280)
...+..+.+++. ..++..+.. +.-......+...|+|++++-.. . . ... - ..+++.+|
T Consensus 55 ~~~~~~l~~~~v-----dgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~L~~~~G 129 (289)
T 3brs_A 55 NELIEEAIKRKP-----DVILLAAADYEKTYDAAKEIKDAGIKLIVIDSGMKQDIADITVATDNIQAGIRIGAVTKNLVR 129 (289)
T ss_dssp HHHHHHHHHTCC-----SEEEECCSCTTTTHHHHTTTGGGTCEEEEESSCCSSCCCSEEEECCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCC-----CEEEEeCCChHHhHHHHHHHHHCCCcEEEECCCCCCCcceEEEeeChHHHHHHHHHHHHHHcC
Confidence 344555555554 346655442 22112222344578998776421 1 1 111 1 22334346
Q ss_pred --CEEEEECCCCCH---HHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCCchhHHH
Q 023565 116 --AEIILADSALRF---EEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTG 190 (280)
Q Consensus 116 --a~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~G 190 (280)
.+|.++.+..+. .++.+-.++..++.+..+ ............++ ....+++++- ++||+|++. +...+.|
T Consensus 130 ~~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~-~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~ai~~~--~d~~a~g 204 (289)
T 3brs_A 130 KSGKIGVISFVKNSKTAMDREEGLKIGLSDDSNKI-EAIYYCDSNYDKAY-DGTVELLTKY-PDISVMVGL--NQYSATG 204 (289)
T ss_dssp SSCEEEEEESCTTSHHHHHHHHHHHHHHGGGGGGE-EEEEECTTCHHHHH-HHHHHHHHHC-TTEEEEEES--SHHHHHH
T ss_pred CCceEEEEECCCCCccHHHHHHHHHHHHHhCCCcE-EeeecCCCCHHHHH-HHHHHHHHhC-CCceEEEEC--CCcchHH
Confidence 577666533222 233333344445543221 11111112232333 3445666553 578998875 4567889
Q ss_pred HHHHHHhcCC--CcEEEEEeCCC
Q 023565 191 AGRFLKENNP--DIKVYGVEPSE 211 (280)
Q Consensus 191 i~~~~k~~~p--~~~vigVe~~~ 211 (280)
+..++++.+- ++.|+|++...
T Consensus 205 ~~~al~~~G~~~di~vvg~d~~~ 227 (289)
T 3brs_A 205 AARAIKDMSLEAKVKLVCIDSSM 227 (289)
T ss_dssp HHHHHHHTTCTTTSEEEEEESCS
T ss_pred HHHHHHhcCCCCCEEEEEECCCH
Confidence 9999988763 58999998644
No 491
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=32.55 E-value=85 Score=27.72 Aligned_cols=88 Identities=14% Similarity=0.208 Sum_probs=41.1
Q ss_pred CcEEEEeCCCCCHHHHHHHHHCC-CEEEEECCCCCHHH--HHHHHHHHHHhCCCeEE-cCCC-CCCccHHHHHHhHHHHH
Q 023565 93 YNLIIVMPSTCSMERRIVLRALG-AEIILADSALRFEE--ILEKGEEILKKTPDGYL-LRQF-ENPANPKIHYETTGPEI 167 (280)
Q Consensus 93 ~~~~ivvp~~~~~~~~~~l~~~G-a~v~~~~~~~~~~~--~~~~a~~~~~~~~~~~~-~~~~-~~~~~~~~g~~t~~~Ei 167 (280)
.|..++...+.-...-..++.+| -++.++.+. ...+ ..++..+..++.+-.+. .+.. .||.. ....-+.|.
T Consensus 8 ~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~-~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~---~~v~~~~~~ 83 (386)
T 1rrm_A 8 LNETAWFGRGAVGALTDEVKRRGYQKALIVTDK-TLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTI---TVVKEGLGV 83 (386)
T ss_dssp CCSEEEESTTGGGGHHHHHHHHTCCEEEEECBH-HHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBH---HHHHHHHHH
T ss_pred CCceEEECcCHHHHHHHHHHHcCCCEEEEEECc-chhhchHHHHHHHHHHHcCCeEEEECCccCCCCH---HHHHHHHHH
Confidence 45556666555444445556666 466666532 1211 34445555554422222 2222 23322 122233444
Q ss_pred HHhhCCCCCEEEEecCCchh
Q 023565 168 WQDSGGKVDAFISGIGTGGT 187 (280)
Q Consensus 168 ~~q~~~~~d~vv~~vG~Gg~ 187 (280)
+++. ++| +|+++|||+.
T Consensus 84 ~~~~--~~d-~IIavGGGsv 100 (386)
T 1rrm_A 84 FQNS--GAD-YLIAIGGGSP 100 (386)
T ss_dssp HHHH--TCS-EEEEEESHHH
T ss_pred HHhc--CcC-EEEEeCChHH
Confidence 4444 466 5678887764
No 492
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=32.53 E-value=91 Score=26.60 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=32.3
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~--~~~~~~l~~~Ga~v~~~~~ 123 (280)
.++..++|..+..++..+. ..-.-.|+++.... ..-...++..|++++.++.
T Consensus 76 ~v~~~~gg~~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~ 129 (393)
T 3kgw_A 76 TLVVSGSGHCAMETALFNL-LEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIK 129 (393)
T ss_dssp EEEESCCTTTHHHHHHHHH-CCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCcHHHHHHHHHhc-CCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeC
Confidence 4777788888887776655 32223344443222 2235667889999998864
No 493
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.30 E-value=1.3e+02 Score=25.19 Aligned_cols=31 Identities=26% Similarity=0.272 Sum_probs=25.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp 100 (280)
+-+|+..+|.-|+++|..-...|.+++++..
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 5578888899999999999999998777654
No 494
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=32.21 E-value=2e+02 Score=23.10 Aligned_cols=76 Identities=17% Similarity=0.111 Sum_probs=42.7
Q ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhhCCCCCEEEEecCC
Q 023565 105 MERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGT 184 (280)
Q Consensus 105 ~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~ 184 (280)
....+.+...|++|+.+... +.+...+...++.+.. ......+.| -... .....+..++.++. +.+|.+|..+|.
T Consensus 18 ~~ia~~l~~~G~~V~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~D-v~d~-~~v~~~~~~~~~~~-g~id~lv~nAg~ 92 (246)
T 3osu_A 18 RSIALQLAEEGYNVAVNYAG-SKEKAEAVVEEIKAKG-VDSFAIQAN-VADA-DEVKAMIKEVVSQF-GSLDVLVNNAGI 92 (246)
T ss_dssp HHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHTT-SCEEEEECC-TTCH-HHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC-CHHHHHHHHHHHHhcC-CcEEEEEcc-CCCH-HHHHHHHHHHHHHc-CCCCEEEECCCC
Confidence 34566777789999887642 2222222333333322 222222332 2222 34456667788887 589999999885
Q ss_pred c
Q 023565 185 G 185 (280)
Q Consensus 185 G 185 (280)
.
T Consensus 93 ~ 93 (246)
T 3osu_A 93 T 93 (246)
T ss_dssp C
T ss_pred C
Confidence 4
No 495
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=32.18 E-value=1.2e+02 Score=22.59 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=23.9
Q ss_pred EEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCE
Q 023565 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (280)
Q Consensus 72 vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~ 117 (280)
++.+........+...|...|++.+++.+.+..++..+..+..|.+
T Consensus 73 vii~vp~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 73 IVFVVPPKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVE 118 (138)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCE
T ss_pred EEEEeCHHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCE
Confidence 4444444444555544555666665555554444444445555544
No 496
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=32.15 E-value=2e+02 Score=23.16 Aligned_cols=83 Identities=12% Similarity=0.159 Sum_probs=46.2
Q ss_pred cEEEEeCCCC--CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHHhh
Q 023565 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (280)
Q Consensus 94 ~~~ivvp~~~--~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~ 171 (280)
+.++|.-.+. -....+.+...|++|+.++.+ .+..+...+.. .....+ .+.| -... .....+..++.++.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~--~~~~~~-~~~D-~~~~-~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEI--GDAALA-VAAD-ISKE-ADVDAAVEAALSKF 81 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHH--CTTEEE-EECC-TTSH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHh--CCceEE-EEec-CCCH-HHHHHHHHHHHHhc
Confidence 4555554432 244567777789999999854 22222222211 112222 2222 1222 23455667777887
Q ss_pred CCCCCEEEEecCCc
Q 023565 172 GGKVDAFISGIGTG 185 (280)
Q Consensus 172 ~~~~d~vv~~vG~G 185 (280)
+.+|.+|..+|.+
T Consensus 82 -g~id~li~~Ag~~ 94 (261)
T 3n74_A 82 -GKVDILVNNAGIG 94 (261)
T ss_dssp -SCCCEEEECCCCC
T ss_pred -CCCCEEEECCccC
Confidence 5899999998864
No 497
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=32.14 E-value=1.9e+02 Score=27.54 Aligned_cols=32 Identities=31% Similarity=0.431 Sum_probs=28.7
Q ss_pred eEEEEeCCChHHHHHHHHHHHcCCcEEEEeCC
Q 023565 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (280)
Q Consensus 70 ~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~ 101 (280)
..|+.-.+|..|.+.|..+++.|.+++++-..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 405 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQVTLFDAH 405 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35999999999999999999999999888754
No 498
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=32.12 E-value=92 Score=28.59 Aligned_cols=63 Identities=17% Similarity=0.084 Sum_probs=34.9
Q ss_pred EEcCCCCCCccHHHHHHhHHHHHHHhhC----------CCCCEEEEecC-CchhHHHHHHH----HHhcCCCcEEEEE
Q 023565 145 YLLRQFENPANPKIHYETTGPEIWQDSG----------GKVDAFISGIG-TGGTVTGAGRF----LKENNPDIKVYGV 207 (280)
Q Consensus 145 ~~~~~~~~~~~~~~g~~t~~~Ei~~q~~----------~~~d~vv~~vG-~Gg~~~Gi~~~----~k~~~p~~~vigV 207 (280)
++..+-+...|+.-||.+.|.|+.++.- ..++.+++..+ +|||=+|++.. ++..+|+..++.+
T Consensus 92 ~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~ 169 (451)
T 3ryc_A 92 LITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEF 169 (451)
T ss_dssp EEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred eeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEEE
Confidence 3344445556776688888888866531 12444444433 34555565554 4556776544433
No 499
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=32.04 E-value=2.1e+02 Score=23.44 Aligned_cols=67 Identities=18% Similarity=0.079 Sum_probs=40.7
Q ss_pred CeEEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
Q 023565 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILK 139 (280)
Q Consensus 69 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~~~~~~~~~~~a~~~~~ 139 (280)
.+.+|+..+|--|+++|......|.+++++... ..+++.+.......+.+|-+ +.++..+...+..+
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARR---VERLKALNLPNTLCAQVDVT-DKYTFDTAITRAEK 83 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHTTCCTTEEEEECCTT-CHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHhhcCCceEEEecCC-CHHHHHHHHHHHHH
Confidence 355888888999999999999999998876543 34444333234445555543 33333333333333
No 500
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=32.03 E-value=2.2e+02 Score=24.43 Aligned_cols=52 Identities=13% Similarity=-0.063 Sum_probs=34.9
Q ss_pred EEEEeCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHCCCEEEEECC
Q 023565 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (280)
Q Consensus 71 ~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~Ga~v~~~~~ 123 (280)
.++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.
T Consensus 105 ~v~~~~ggt~a~~~~~~~~-~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~ 156 (398)
T 3a2b_A 105 AAILFSTGFQSNLGPLSCL-MGRNDYILLDERDHASIIDGSRLSFSKVIKYGH 156 (398)
T ss_dssp EEEEESSHHHHHHHHHHHS-SCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT
T ss_pred cEEEECCHHHHHHHHHHHH-hCCCCEEEECCccCHHHHHHHHHcCCceEEeCC
Confidence 4777777777766655543 233345666665556667778889999998875
Done!