BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023571
(280 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
M+A E+GG +VLK + VP K+ QVLIKV A +NPV+ R G + + LP
Sbjct: 30 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY-SRKPLLP 88
Query: 144 TVPGYDVAA 152
PG DVA
Sbjct: 89 YTPGSDVAG 97
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 83 EMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGK---FKATD 139
E KA + ++G VLK + T P+ +++Q LIKV AA+LNP+D K R G K
Sbjct: 6 EXKAIQFDQFGPPKVLKLVDTPT-PEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLK 64
Query: 140 SPLPTVPGYD 149
+ LP+ GYD
Sbjct: 65 NNLPSGLGYD 74
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNF-EDLPEKFDVVYDAIGQ--CDRAVKAIK 203
G V T+S RN FLK+LGA+ I+Y +++F + D V D +G +++ +K
Sbjct: 177 GTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLK 236
Query: 204 EGGTVVAL----TGAVTP-------PGFRFVVTSNGEVLKKLNPYLESGKVKPIIDPKGP 252
E G +V++ G V F + N E L L + K++ I+
Sbjct: 237 ETGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLR--IEISRI 294
Query: 253 FPFSQVVEAFSYIETNKATGKVV 275
F S+ V A +ET GK+V
Sbjct: 295 FQLSEAVTAHELLETGHVRGKLV 317
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQC--DRAVKAI 202
+ SS FLKSLG D I+Y + ++ PE DVVY+++G D AV A+
Sbjct: 200 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDAL 259
Query: 203 KEGGTVVA---LTGAVTPPGFRFVVTSN--GEVLKK--------LNPYLE---------- 239
G ++ ++G TP G V ++LKK LN YL
Sbjct: 260 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 319
Query: 240 ----SGKVKPIID-----PKGPFP-FSQVVEAFSYIETNKATGKVVIH 277
SG + +D P+G F + A +Y+ K TGK+V+
Sbjct: 320 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 367
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQC--DRAVKAI 202
+ SS FLKSLG D I+Y + ++ PE DVVY+++G D AV A+
Sbjct: 171 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDAL 230
Query: 203 KEGGTVVA---LTGAVTPPGFRFVVTSN--GEVLKK--------LNPYLE---------- 239
G ++ ++G TP G V ++LKK LN YL
Sbjct: 231 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 290
Query: 240 ----SGKVKPIID-----PKGPFP-FSQVVEAFSYIETNKATGKVVIH 277
SG + +D P+G F + A +Y+ K TGK+V+
Sbjct: 291 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 338
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQC--DRAVKAI 202
+ SS FLKSLG D I+Y + ++ PE DVVY+++G D AV A+
Sbjct: 192 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDAL 251
Query: 203 KEGGTVVA---LTGAVTPPGFRFVVTSN--GEVLKK--------LNPYLE---------- 239
G ++ ++G TP G V ++LKK LN YL
Sbjct: 252 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 311
Query: 240 ----SGKVKPIID-----PKGPFP-FSQVVEAFSYIETNKATGKVVIH 277
SG + +D P+G F + A +Y+ K TGK+V+
Sbjct: 312 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 359
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 39/167 (23%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK---FDVVYDAIG------------- 193
V A S E ++ LGAD IDY + E+ + FD + D +G
Sbjct: 211 VTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKK 270
Query: 194 ---------------QCDR---AVKAIKEGGTV--VALTGAVTPPGFRFVV-TSNGEVLK 232
DR A ++ G TV AL +R+ ++G L
Sbjct: 271 WSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLD 330
Query: 233 KLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPI 279
+ +++GK++P+I+ FPFS+V EAF +E A GK VI+ +
Sbjct: 331 DIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHARGKTVINVV 375
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 86 AWLYGEYGGVDVLKFDEKVTVPQVKE-DQVLIKVVAAALNPVDGKRRQGKFKATDSPLPT 144
AW+ +YG +VL+F + + +P + ++V++KV AA++NP+D R
Sbjct: 24 AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRS------------ 71
Query: 145 VPGYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKE 204
GY A + R+ +K G + + +D V + +C VK K
Sbjct: 72 --GYGATALNMKRDPLHVKIKGEEFPLTLGRD-----------VSGVVMECGLDVKYFKP 118
Query: 205 GGTVVALTGAVTPPGFR-----FVVTSNGEVLKK 233
G V A PP + FVV S EV K
Sbjct: 119 GDEV----WAAVPPWKQGTLSEFVVVSGNEVSHK 148
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 33/161 (20%)
Query: 147 GYDVAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEK-----FDVVYDAIGQ--CDRAV 199
G V AT+ +LE+++ LGA ID +++ + E FD+VYD +G D +
Sbjct: 175 GARVFATARGSDLEYVRDLGAT-PIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASF 233
Query: 200 KAIKEGGTVVALTG----AVTPPGFRFVVTSN----------------GEVLKKLNPYLE 239
A+K G VV+ G + P F+ S GE L++ + ++
Sbjct: 234 SAVKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEXLREADALVQ 293
Query: 240 SGKVKPIIDPKGPFPFSQVVEAFSYI----ETNKATGKVVI 276
+GK+ P +DP+ F +++ A+ + + + GK+ I
Sbjct: 294 TGKLAPRLDPR-TFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 102 EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAAT 153
K+ PQ QVL+++ A+ NP+D K R G+ PLP + G D+A T
Sbjct: 23 RKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGXDLAGT 74
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 34/162 (20%)
Query: 147 GYDVAATS-STRNLEFLKSLGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQC--DRA 198
G +V AT+ ST E + LGA I+Y ++F + + D++ D IG +R
Sbjct: 192 GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDXIGAAYFERN 251
Query: 199 VKAIKEGG--TVVALTGAVTPPGF--------RFVVTSN--------------GEVLKKL 234
+ ++ + G +++A G R VT + ++L ++
Sbjct: 252 IASLAKDGCLSIIAFLGGAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEV 311
Query: 235 NPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVI 276
P LE+G V P+I F F V +A +E GKV +
Sbjct: 312 WPLLEAGTVAPVIHKV--FAFEDVADAHRLLEEGSHVGKVXL 351
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
T+P + K L E GG DV+K+ E VP + E+++LIK +N ++ R+G +
Sbjct: 4 TIPEQQKVILIDEIGGYDVIKY-EDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCE 62
Query: 139 DSPLPTVPGYDVAAT 153
P V G + + T
Sbjct: 63 K---PYVLGREASGT 74
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 33/157 (21%)
Query: 153 TSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIG--QCDRAVKAIKE 204
S + L+ + LGA +Y K++F + KF +++ D IG ++ V +
Sbjct: 194 AGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLAL 253
Query: 205 GGTVV--ALTGA--VTPPGFRFVVTSNGEVLKKL-----NPYLE------SGKVKPIIDP 249
G V L G + P F ++ G ++ L N Y + + ++ P
Sbjct: 254 DGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFST 313
Query: 250 KGP----------FPFSQVVEAFSYIETNKATGKVVI 276
+GP +P +++ EA Y+E NK GK+V+
Sbjct: 314 EGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 350
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 100 FDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
+ ++V P E +VL+KV A+ALN D +RQG++
Sbjct: 38 YVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQY 73
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 33/157 (21%)
Query: 153 TSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIG--QCDRAVKAIKE 204
S + L+ + LGA +Y K++F + KF +++ D IG ++ V +
Sbjct: 178 AGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLAL 237
Query: 205 GGTVV--ALTGA--VTPPGFRFVVTSNGEVLKKL-----NPYLE------SGKVKPIIDP 249
G V L G + P F ++ G ++ L N Y + + ++ P
Sbjct: 238 DGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFST 297
Query: 250 KGP----------FPFSQVVEAFSYIETNKATGKVVI 276
+GP +P +++ EA Y+E NK GK+V+
Sbjct: 298 EGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 334
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 100 FDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
+ ++V P E +VL+KV A+ALN D +RQG++
Sbjct: 22 YVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQY 57
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 25/150 (16%)
Query: 150 VAATSSTRNLEFLKSLGADLAIDYTKDNFEDLPEKF------DVVYDAIGQC--DRAVKA 201
+A S L K+LGAD ++YT ++ + D V D G + +KA
Sbjct: 195 IATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKA 254
Query: 202 IKEGGTVVALTGAVT------PPGFRF-----VVTSNGEVLKKLNP---YLESGKVKPII 247
GG +A+ GA + P F ++ S +L P ++E GK+KP++
Sbjct: 255 TANGGR-IAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVV 313
Query: 248 DPKGPFPFSQVVEAFSYIETNKATGKVVIH 277
P E +E + GKVV+
Sbjct: 314 GQV--LPLEAAAEGHRLLEERRVFGKVVLQ 341
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 84 MKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLP 143
M+A + GG +VL+ + + VP+ +V +++ AAALN +D R+G + PLP
Sbjct: 1 MRAVVMRARGGPEVLEVAD-LPVPEPGPKEVRVRLKAAALNHLDVWVRKG-VASPKLPLP 58
Query: 144 TVPGYD 149
V G D
Sbjct: 59 HVLGAD 64
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
T+P MKA + YG L+ +E V VP QVL+K+ A+ + D +G +
Sbjct: 2 TLPQTMKAAVVHAYGAP--LRIEE-VKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP-V 57
Query: 139 DSPLPTVPGYD----VAATSS 155
PLP +PG++ VAA S
Sbjct: 58 KPPLPFIPGHEGVGYVAAVGS 78
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 96 DVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD 149
DVL+ + K P +K+++V ++++ +NP D G + A PLP +PGY+
Sbjct: 18 DVLQVEYKNIEP-LKDNEVFVRMLVRPINPSDLIPITGAY-AHRIPLPNIPGYE 69
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 102 EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF------KATDSPLPTVPGYDVAA 152
E + +P+ K QVLIK+ AA + D RQG+F + LP G+++A
Sbjct: 16 EDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 102 EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF------KATDSPLPTVPGYDVA 151
+++ VP+ K QVLIKV AA + D RQG+F + LP G+++A
Sbjct: 16 QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 102 EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF------KATDSPLPTVPGYDVA 151
+++ VP+ K QVLIKV AA + D RQG+F + LP G+++A
Sbjct: 16 QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 102 EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF------KATDSPLPTVPGYDVA 151
+++ VP+ K QVLIKV AA + D RQG+F + LP G+++A
Sbjct: 16 QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 102 EKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKF------KATDSPLPTVPGYDVA 151
+++ VP+ K QVLIKV AA + D RQG+F + LP G+++A
Sbjct: 16 QEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIA 71
>pdb|1D4C|A Chain A, Crystal Structure Of The Uncomplexed Form Of The
Flavocytochrome C Fumarate Reductase Of Shewanella
Putrefaciens Strain Mr-1
pdb|1D4C|B Chain B, Crystal Structure Of The Uncomplexed Form Of The
Flavocytochrome C Fumarate Reductase Of Shewanella
Putrefaciens Strain Mr-1
pdb|1D4C|C Chain C, Crystal Structure Of The Uncomplexed Form Of The
Flavocytochrome C Fumarate Reductase Of Shewanella
Putrefaciens Strain Mr-1
pdb|1D4C|D Chain D, Crystal Structure Of The Uncomplexed Form Of The
Flavocytochrome C Fumarate Reductase Of Shewanella
Putrefaciens Strain Mr-1
Length = 572
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 135 FKATDSPLPTVPGYDVA--ATSSTRNLEFLKS 164
FKAT+ P T G DVA A ++TR+LE++++
Sbjct: 333 FKATNHPGATGDGLDVALQAGAATRDLEYIQA 364
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 79 TVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT 138
++P+ ++A +YG +G + + + + V+ V +K++AA +NP D QG +
Sbjct: 22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL- 80
Query: 139 DSPLPTVP 146
LP +P
Sbjct: 81 ---LPELP 85
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 106 VPQVKEDQVLIKVVAAALNPVDGKRRQGKF 135
P + DQV ++V A A+NP D K R G+F
Sbjct: 31 CPMLPRDQVYVRVEAVAINPSDTKMR-GQF 59
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 165 LGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQ--CDRAVKAIKEGGTVVALTGAVT 216
LG D AI+Y KDN E P DV +D +G D + + E ++ L G ++
Sbjct: 201 LGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHII-LCGQIS 258
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 165 LGADLAIDYTKDNF-----EDLPEKFDVVYDAIGQ--CDRAVKAIKEGGTVVALTGAVT 216
LG D AI+Y KDN E P DV +D +G D + + E ++ L G ++
Sbjct: 206 LGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHII-LCGQIS 263
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 106 VPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYD 149
+P+ K ++L+K+ + ++NPVD K+R S P V G+D
Sbjct: 27 IPEPKVHEILVKIQSISVNPVDTKQRLMDV----SKAPRVLGFD 66
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 81 PSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDS 140
P+ ++A +YG +G + + + + V+ V +K++AA +NP D QG +
Sbjct: 11 PARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--- 67
Query: 141 PLPTVPG 147
LP +P
Sbjct: 68 -LPELPA 73
>pdb|1D4D|A Chain A, Crystal Structure Of The Succinate Complexed Form Of The
Flavocytochrome C Fumarate Reductase Of Shewanella
Putrefaciens Strain Mr-1
pdb|1D4E|A Chain A, Crystal Structure Of The Flavocytochrome C Fumarate
Reductase Of Shewanella Putrefaciens Strain Mr-1
Complexed With Fumarate
Length = 572
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 135 FKATDSPLPTVPGYDVA--ATSSTRNLEFLKS 164
FKAT+ P T G DVA A ++TR+L+++++
Sbjct: 333 FKATNHPGATGDGLDVALQAGAATRDLQYIQA 364
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 124 NPVDGKRRQGKFKATDSPLPTVPG 147
N VDG RRQ + AT PLP G
Sbjct: 89 NYVDGYRRQNAYIATQGPLPETFG 112
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 124 NPVDGKRRQGKFKATDSPLPTVPG 147
N VDG RRQ + AT PLP G
Sbjct: 91 NYVDGYRRQNAYIATQGPLPETFG 114
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 28.5 bits (62), Expect = 4.3, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 229 EVLKKLNPYLESGKVKPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIH 277
EV + L ++ G V+P+ FP ++V AF Y+ K GKVVI
Sbjct: 1809 EVSELLKAGIQEGVVQPL--KCTVFPRTKVEAAFRYMAQGKHIGKVVIQ 1855
>pdb|3QYF|A Chain A, Crystal Structure Of The Crispr-Associated Protein Sso1393
From Sulfolobus Solfataricus
pdb|3QYF|B Chain B, Crystal Structure Of The Crispr-Associated Protein Sso1393
From Sulfolobus Solfataricus
Length = 324
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 244 KPIIDPKGPFPFSQVVEAFSYIETNKATGKVVIHPIP 280
+ I++ +G F VEA++Y E+ + GK V +P
Sbjct: 280 RVIVEGEGERTFDNEVEAYNYXESKRKEGKNVRVEVP 316
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,156,012
Number of Sequences: 62578
Number of extensions: 342725
Number of successful extensions: 829
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 790
Number of HSP's gapped (non-prelim): 60
length of query: 280
length of database: 14,973,337
effective HSP length: 98
effective length of query: 182
effective length of database: 8,840,693
effective search space: 1609006126
effective search space used: 1609006126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 51 (24.3 bits)