Query 023575
Match_columns 280
No_of_seqs 194 out of 1408
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 05:05:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023575.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023575hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1E-57 2.2E-62 404.6 22.1 263 7-280 2-286 (323)
2 PLN02577 hydroxymethylglutaryl 100.0 3.6E-50 7.7E-55 372.9 24.6 267 6-272 2-268 (459)
3 PRK12880 3-oxoacyl-(acyl carri 100.0 2.3E-47 5E-52 347.7 20.4 266 5-280 4-306 (353)
4 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.3E-46 2.9E-51 348.6 25.1 264 8-271 1-269 (454)
5 PRK05963 3-oxoacyl-(acyl carri 100.0 1.3E-46 2.8E-51 340.2 19.5 264 8-280 3-290 (326)
6 PRK07204 3-oxoacyl-(acyl carri 100.0 9.8E-44 2.1E-48 321.7 20.6 266 8-280 4-293 (329)
7 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 1E-43 2.2E-48 326.8 20.8 241 9-263 1-243 (379)
8 COG3425 PksG 3-hydroxy-3-methy 100.0 9.5E-44 2.1E-48 316.5 19.0 262 7-279 1-274 (377)
9 PRK04262 hypothetical protein; 100.0 2E-43 4.4E-48 321.8 19.6 261 7-280 1-274 (347)
10 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 6.9E-43 1.5E-47 317.7 21.2 260 8-280 1-273 (345)
11 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 7.1E-43 1.5E-47 315.8 20.5 262 7-280 1-289 (326)
12 PLN02326 3-oxoacyl-[acyl-carri 100.0 9.3E-43 2E-47 320.7 20.9 265 7-280 46-343 (379)
13 PRK12879 3-oxoacyl-(acyl carri 100.0 2.4E-42 5.1E-47 312.1 20.3 266 7-280 3-288 (325)
14 PRK06840 hypothetical protein; 100.0 3.3E-41 7.1E-46 306.5 20.4 267 6-280 2-299 (339)
15 PRK09258 3-oxoacyl-(acyl carri 100.0 3.8E-41 8.2E-46 305.9 20.0 262 6-280 3-302 (338)
16 cd00830 KAS_III Ketoacyl-acyl 100.0 5E-41 1.1E-45 302.5 19.7 265 8-280 1-286 (320)
17 PLN03169 chalcone synthase fam 100.0 6.4E-41 1.4E-45 308.9 19.5 260 7-280 20-349 (391)
18 PRK06816 3-oxoacyl-(acyl carri 100.0 1.2E-40 2.6E-45 306.6 16.0 265 7-280 1-340 (378)
19 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 7.5E-40 1.6E-44 295.0 20.2 266 7-280 1-282 (318)
20 cd00831 CHS_like Chalcone and 100.0 5.8E-40 1.3E-44 300.7 18.8 262 9-280 2-327 (361)
21 PLN03171 chalcone synthase-lik 100.0 4E-39 8.6E-44 297.6 20.1 261 8-280 22-353 (399)
22 PRK09352 3-oxoacyl-(acyl carri 100.0 1.3E-38 2.9E-43 286.9 20.4 264 6-280 1-282 (319)
23 PLN03168 chalcone synthase; Pr 100.0 4.7E-38 1E-42 289.4 19.4 264 8-280 15-342 (389)
24 PRK07515 3-oxoacyl-(acyl carri 100.0 1.9E-37 4E-42 285.1 20.1 258 8-280 2-337 (372)
25 PLN03172 chalcone synthase fam 100.0 2.7E-37 5.9E-42 284.3 20.3 260 8-280 16-343 (393)
26 PLN03173 chalcone synthase; Pr 100.0 3E-37 6.4E-42 283.9 19.1 259 8-280 16-343 (391)
27 PLN03170 chalcone synthase; Pr 100.0 1.5E-36 3.3E-41 280.2 18.1 261 8-280 20-347 (401)
28 cd00827 init_cond_enzymes "ini 100.0 5.1E-36 1.1E-40 270.4 20.3 260 8-280 1-290 (324)
29 PLN02377 3-ketoacyl-CoA syntha 100.0 2.7E-35 5.8E-40 275.7 20.4 268 4-280 93-441 (502)
30 PLN02932 3-ketoacyl-CoA syntha 100.0 8.6E-35 1.9E-39 270.8 20.7 267 4-280 63-417 (478)
31 PLN02854 3-ketoacyl-CoA syntha 100.0 7.7E-35 1.7E-39 272.6 18.7 267 4-280 109-457 (521)
32 KOG1393 Hydroxymethylglutaryl- 100.0 2.3E-33 4.9E-38 245.9 22.9 268 5-272 8-277 (462)
33 COG3424 BcsA Predicted naringe 100.0 2E-33 4.4E-38 240.8 17.3 257 9-279 2-316 (356)
34 PLN02192 3-ketoacyl-CoA syntha 100.0 5.5E-33 1.2E-37 259.6 15.8 167 4-176 97-299 (511)
35 PF01154 HMG_CoA_synt_N: Hydro 100.0 1.4E-32 3.1E-37 221.5 11.4 173 5-177 1-173 (174)
36 PLN00415 3-ketoacyl-CoA syntha 100.0 4.3E-30 9.4E-35 236.9 18.6 169 4-177 55-258 (466)
37 PF00195 Chal_sti_synt_N: Chal 99.9 6.8E-27 1.5E-31 197.8 10.5 167 6-177 12-226 (226)
38 cd00327 cond_enzymes Condensin 99.9 4.4E-24 9.6E-29 185.9 11.4 177 56-267 6-187 (254)
39 PF08392 FAE1_CUT1_RppA: FAE1/ 99.9 1.8E-21 4E-26 169.1 14.9 170 3-178 3-208 (290)
40 cd00825 decarbox_cond_enzymes 99.9 1.1E-21 2.4E-26 177.4 13.2 197 57-279 11-272 (332)
41 TIGR02845 spore_V_AD stage V s 99.8 2.6E-19 5.6E-24 157.7 15.6 220 8-267 9-247 (327)
42 PRK06147 3-oxoacyl-(acyl carri 99.8 6.1E-18 1.3E-22 154.2 16.8 224 8-257 4-266 (348)
43 PRK08304 stage V sporulation p 99.8 3.2E-17 6.9E-22 144.9 15.7 220 8-267 15-253 (337)
44 cd00834 KAS_I_II Beta-ketoacyl 99.6 1.8E-14 3.9E-19 133.9 17.3 225 7-259 1-309 (406)
45 PF08545 ACP_syn_III: 3-Oxoacy 99.6 1.5E-15 3.2E-20 109.2 3.3 73 115-189 1-79 (80)
46 cd00829 SCP-x_thiolase Thiolas 99.6 1.9E-13 4.1E-18 126.0 17.0 96 54-154 13-108 (375)
47 PRK06064 acetyl-CoA acetyltran 99.5 3.6E-13 7.9E-18 124.7 16.7 96 53-153 18-115 (389)
48 smart00825 PKS_KS Beta-ketoacy 99.5 6.3E-14 1.4E-18 131.1 11.5 114 57-176 87-245 (424)
49 PRK12404 stage V sporulation p 99.5 2.7E-13 5.9E-18 119.4 14.0 222 8-267 13-251 (334)
50 PRK06501 3-oxoacyl-(acyl carri 99.5 1.7E-12 3.7E-17 121.5 18.3 226 7-259 11-323 (425)
51 PRK06158 thiolase; Provisional 99.5 3.5E-12 7.5E-17 117.9 18.6 102 39-150 11-112 (384)
52 cd00751 thiolase Thiolase are 99.5 2.7E-13 5.9E-18 125.5 9.8 97 53-154 18-115 (386)
53 TIGR01930 AcCoA-C-Actrans acet 99.4 7.3E-13 1.6E-17 122.5 9.9 96 54-154 18-114 (386)
54 cd00833 PKS polyketide synthas 99.4 2.3E-12 4.9E-17 120.4 11.3 115 57-177 87-246 (421)
55 PRK05656 acetyl-CoA acetyltran 99.4 1.9E-12 4E-17 120.0 10.1 97 53-154 22-119 (393)
56 PRK12578 acetyl-CoA acetyltran 99.4 3.3E-12 7.2E-17 118.2 11.0 108 41-154 6-113 (385)
57 PRK09051 beta-ketothiolase; Pr 99.4 3.4E-12 7.4E-17 118.2 10.9 98 53-154 23-121 (394)
58 PRK08313 acetyl-CoA acetyltran 99.4 3.8E-12 8.2E-17 117.7 10.8 107 41-153 8-116 (386)
59 PRK09052 acetyl-CoA acetyltran 99.4 4.1E-12 8.8E-17 117.8 10.9 97 54-154 28-126 (399)
60 PRK06205 acetyl-CoA acetyltran 99.3 4.5E-12 9.8E-17 117.9 9.5 96 54-154 23-119 (404)
61 PRK07108 acetyl-CoA acetyltran 99.3 4.8E-12 1E-16 117.2 9.5 97 53-154 23-121 (392)
62 PRK08235 acetyl-CoA acetyltran 99.3 5.6E-12 1.2E-16 116.8 9.8 97 53-154 22-119 (393)
63 PRK08242 acetyl-CoA acetyltran 99.3 1.1E-11 2.4E-16 114.8 10.6 97 53-154 24-122 (402)
64 PRK06289 acetyl-CoA acetyltran 99.3 1.1E-11 2.4E-16 115.3 9.7 98 50-154 19-121 (403)
65 cd00826 nondecarbox_cond_enzym 99.3 1.6E-11 3.4E-16 113.8 10.4 97 54-154 20-116 (393)
66 PRK06059 lipid-transfer protei 99.3 2.2E-11 4.8E-16 113.2 10.8 96 54-154 20-116 (399)
67 cd00828 elong_cond_enzymes "el 99.3 4.3E-11 9.3E-16 111.5 12.5 175 56-256 71-305 (407)
68 TIGR03150 fabF beta-ketoacyl-a 99.3 7.5E-11 1.6E-15 109.8 13.9 222 8-256 2-306 (407)
69 PRK05790 putative acyltransfer 99.3 2.7E-11 5.9E-16 112.4 10.0 96 54-154 23-119 (393)
70 PRK06954 acetyl-CoA acetyltran 99.2 4E-11 8.6E-16 111.3 10.6 96 54-154 28-124 (397)
71 PRK08170 acetyl-CoA acetyltran 99.2 3.6E-11 7.8E-16 112.6 10.1 96 54-154 24-120 (426)
72 PRK07103 polyketide beta-ketoa 99.2 1.4E-10 3E-15 108.2 13.3 173 57-257 80-313 (410)
73 PRK06065 acetyl-CoA acetyltran 99.2 7.2E-11 1.6E-15 109.2 11.0 107 39-152 12-120 (392)
74 PRK07516 acetyl-CoA acetyltran 99.2 1.1E-10 2.4E-15 108.1 11.3 97 53-154 18-116 (389)
75 PRK06445 acetyl-CoA acetyltran 99.2 6.4E-11 1.4E-15 109.9 9.2 98 54-154 29-126 (394)
76 PRK06333 3-oxoacyl-(acyl carri 99.2 1.7E-09 3.7E-14 101.4 17.8 175 57-257 82-320 (424)
77 PRK07314 3-oxoacyl-(acyl carri 99.1 7E-10 1.5E-14 103.5 13.6 225 7-259 2-310 (411)
78 PF00108 Thiolase_N: Thiolase, 99.1 2.6E-10 5.7E-15 100.2 9.8 97 53-154 22-119 (264)
79 PLN02287 3-ketoacyl-CoA thiola 99.1 3.4E-10 7.4E-15 106.4 10.8 98 53-154 67-165 (452)
80 PRK05952 3-oxoacyl-(acyl carri 99.1 6.4E-09 1.4E-13 96.0 17.4 223 6-259 1-288 (381)
81 PRK08439 3-oxoacyl-(acyl carri 99.1 3.4E-09 7.4E-14 98.8 14.9 164 7-177 2-243 (406)
82 PRK07661 acetyl-CoA acetyltran 99.1 6.6E-10 1.4E-14 102.9 9.8 96 54-154 24-121 (391)
83 PRK08256 lipid-transfer protei 99.0 1.2E-09 2.7E-14 101.3 10.6 93 54-154 19-111 (391)
84 PLN02836 3-oxoacyl-[acyl-carri 99.0 7.3E-09 1.6E-13 97.5 15.3 115 57-177 93-266 (437)
85 PRK06066 acetyl-CoA acetyltran 99.0 1.7E-08 3.8E-13 93.1 17.5 104 41-152 9-114 (385)
86 PRK08722 3-oxoacyl-(acyl carri 99.0 6.9E-09 1.5E-13 96.9 14.6 164 7-177 4-245 (414)
87 PRK07851 acetyl-CoA acetyltran 99.0 1.4E-09 3.1E-14 101.2 9.9 96 54-154 24-121 (406)
88 PRK09185 3-oxoacyl-(acyl carri 99.0 8.4E-09 1.8E-13 95.8 15.0 133 95-257 138-292 (392)
89 PTZ00050 3-oxoacyl-acyl carrie 99.0 1.2E-08 2.6E-13 95.6 15.4 116 56-177 76-250 (421)
90 PRK09116 3-oxoacyl-(acyl carri 99.0 9.8E-09 2.1E-13 95.7 14.0 162 7-176 2-243 (405)
91 PLN02787 3-oxoacyl-[acyl-carri 99.0 1.2E-08 2.6E-13 97.9 14.4 223 7-257 129-437 (540)
92 PTZ00455 3-ketoacyl-CoA thiola 98.9 4.7E-09 1E-13 98.5 10.5 99 54-154 45-151 (438)
93 PRK06157 acetyl-CoA acetyltran 98.9 3.8E-09 8.3E-14 98.2 9.8 96 54-154 24-119 (398)
94 PRK14691 3-oxoacyl-(acyl carri 98.9 2E-08 4.4E-13 91.4 13.9 174 57-257 4-238 (342)
95 PRK08131 acetyl-CoA acetyltran 98.9 8.3E-09 1.8E-13 95.9 10.5 96 54-154 23-120 (401)
96 PRK06365 acetyl-CoA acetyltran 98.9 1E-08 2.2E-13 96.1 11.1 96 54-153 34-129 (430)
97 PRK08963 fadI 3-ketoacyl-CoA t 98.9 6.1E-09 1.3E-13 97.6 9.0 97 53-154 25-122 (428)
98 cd00832 CLF Chain-length facto 98.9 1.8E-08 3.9E-13 93.8 12.0 220 7-257 1-302 (399)
99 PRK07850 acetyl-CoA acetyltran 98.9 9.7E-09 2.1E-13 95.0 9.6 96 54-154 23-120 (387)
100 PF00109 ketoacyl-synt: Beta-k 98.9 9.2E-08 2E-12 83.2 15.3 114 57-176 87-251 (254)
101 TIGR02446 FadI fatty oxidation 98.9 8.6E-09 1.9E-13 96.6 8.8 95 54-154 28-124 (430)
102 PRK06633 acetyl-CoA acetyltran 98.8 9.1E-09 2E-13 95.2 8.4 97 54-155 24-121 (392)
103 PRK06366 acetyl-CoA acetyltran 98.8 1.4E-08 3.1E-13 94.0 9.6 95 55-154 24-119 (388)
104 PLN02644 acetyl-CoA C-acetyltr 98.8 1.8E-08 3.9E-13 93.6 10.0 96 54-154 22-118 (394)
105 PRK09050 beta-ketoadipyl CoA t 98.8 1.4E-08 3.1E-13 94.3 9.2 96 54-154 23-121 (401)
106 PRK06504 acetyl-CoA acetyltran 98.8 2E-08 4.3E-13 93.0 10.0 96 54-154 23-120 (390)
107 PRK06519 3-oxoacyl-(acyl carri 98.8 7.2E-08 1.6E-12 89.5 13.5 215 6-257 5-311 (398)
108 PRK13359 beta-ketoadipyl CoA t 98.8 2.3E-08 5E-13 92.9 9.5 95 55-154 24-121 (400)
109 TIGR02430 pcaF beta-ketoadipyl 98.8 2.7E-08 5.8E-13 92.4 9.1 96 54-154 22-120 (400)
110 PRK07910 3-oxoacyl-(acyl carri 98.8 1.3E-07 2.8E-12 88.5 13.6 222 7-257 12-318 (418)
111 PF08540 HMG_CoA_synt_C: Hydro 98.7 3E-08 6.5E-13 87.3 7.7 91 182-272 4-97 (282)
112 PRK07801 acetyl-CoA acetyltran 98.7 5.6E-08 1.2E-12 90.0 9.3 96 55-154 24-120 (382)
113 PRK08947 fadA 3-ketoacyl-CoA t 98.7 5.1E-08 1.1E-12 90.3 8.8 96 54-154 24-122 (387)
114 TIGR02445 fadA fatty oxidation 98.7 5.6E-08 1.2E-12 89.9 8.2 95 54-154 22-120 (385)
115 PRK08142 acetyl-CoA acetyltran 98.7 1.7E-07 3.6E-12 86.8 11.3 103 40-152 9-111 (388)
116 PRK09268 acetyl-CoA acetyltran 98.7 9.5E-08 2.1E-12 89.5 9.7 96 54-154 28-124 (427)
117 PF08541 ACP_syn_III_C: 3-Oxoa 98.7 7.2E-09 1.6E-13 75.9 1.4 46 235-280 1-54 (90)
118 PRK07967 3-oxoacyl-(acyl carri 98.7 6.4E-07 1.4E-11 83.5 14.7 163 7-176 2-242 (406)
119 PF07451 SpoVAD: Stage V sporu 98.7 1.9E-06 4.1E-11 75.4 16.2 181 57-267 51-248 (329)
120 PRK08257 acetyl-CoA acetyltran 98.6 5.5E-07 1.2E-11 86.0 11.4 109 40-154 8-120 (498)
121 COG0304 FabB 3-oxoacyl-(acyl-c 98.5 2.2E-06 4.8E-11 79.5 14.4 176 56-259 70-310 (412)
122 PRK07855 lipid-transfer protei 98.5 7.6E-07 1.6E-11 82.5 10.9 100 40-150 8-108 (386)
123 PRK06025 acetyl-CoA acetyltran 98.4 1.3E-06 2.8E-11 81.3 9.9 96 54-154 26-123 (417)
124 COG3321 Polyketide synthase mo 98.4 1E-05 2.2E-10 83.6 17.4 169 60-258 94-316 (1061)
125 TIGR02813 omega_3_PfaA polyket 98.4 4.7E-06 1E-10 92.1 14.7 131 97-257 186-347 (2582)
126 PRK06690 acetyl-CoA acetyltran 98.3 2.9E-06 6.4E-11 77.8 8.8 91 54-154 22-113 (361)
127 PRK07937 lipid-transfer protei 98.3 3.3E-06 7.1E-11 77.2 8.3 106 41-153 7-113 (352)
128 PF02797 Chal_sti_synt_C: Chal 98.2 1.7E-06 3.7E-11 69.5 4.6 46 234-279 49-105 (151)
129 KOG1406 Peroxisomal 3-ketoacyl 98.2 3.6E-06 7.7E-11 72.2 6.6 110 37-154 7-118 (408)
130 COG0183 PaaJ Acetyl-CoA acetyl 97.6 0.00017 3.7E-09 67.0 7.9 93 57-154 27-123 (392)
131 KOG1394 3-oxoacyl-(acyl-carrie 97.5 0.00046 1E-08 61.8 8.8 227 5-259 22-335 (440)
132 KOG1390 Acetyl-CoA acetyltrans 97.0 0.0015 3.3E-08 57.7 5.9 96 54-154 27-123 (396)
133 KOG1391 Acetyl-CoA acetyltrans 96.4 0.0047 1E-07 53.2 4.7 97 53-154 24-122 (396)
134 PF13723 Ketoacyl-synt_2: Beta 95.9 0.18 4E-06 42.9 11.7 116 56-178 33-172 (218)
135 KOG1392 Acetyl-CoA acetyltrans 95.5 0.0086 1.9E-07 52.4 2.2 94 56-154 65-159 (465)
136 KOG1389 3-oxoacyl CoA thiolase 95.3 0.052 1.1E-06 48.1 6.4 96 54-154 58-154 (435)
137 PRK06025 acetyl-CoA acetyltran 95.2 0.016 3.5E-07 54.2 3.3 43 234-277 324-367 (417)
138 PRK06690 acetyl-CoA acetyltran 95.1 0.023 4.9E-07 52.3 3.8 35 234-268 267-301 (361)
139 PF08541 ACP_syn_III_C: 3-Oxoa 94.3 0.038 8.2E-07 39.9 2.6 73 69-151 1-78 (90)
140 PRK06147 3-oxoacyl-(acyl carri 94.2 0.15 3.3E-06 46.6 7.1 91 60-152 235-331 (348)
141 PRK06816 3-oxoacyl-(acyl carri 93.5 0.23 5E-06 45.9 6.9 88 59-154 272-367 (378)
142 PRK12578 acetyl-CoA acetyltran 92.9 0.32 6.9E-06 45.1 6.9 35 234-268 266-300 (385)
143 TIGR00748 HMG_CoA_syn_Arc hydr 92.8 0.21 4.6E-06 45.6 5.6 81 57-149 206-293 (345)
144 PRK05656 acetyl-CoA acetyltran 92.1 0.19 4.2E-06 46.7 4.4 43 234-277 300-343 (393)
145 cd00751 thiolase Thiolase are 91.7 0.37 8.1E-06 44.7 5.8 44 234-277 294-337 (386)
146 PRK07516 acetyl-CoA acetyltran 91.5 0.56 1.2E-05 43.5 6.7 35 234-268 269-303 (389)
147 PRK08256 lipid-transfer protei 91.4 0.81 1.7E-05 42.5 7.7 35 234-268 273-307 (391)
148 PF02801 Ketoacyl-synt_C: Beta 91.2 0.32 7E-06 37.1 4.1 77 61-138 27-110 (119)
149 PRK04262 hypothetical protein; 91.0 0.52 1.1E-05 43.0 5.9 79 58-148 208-293 (347)
150 PRK05790 putative acyltransfer 90.5 0.62 1.3E-05 43.3 6.0 44 234-277 300-343 (393)
151 PRK09051 beta-ketothiolase; Pr 90.3 0.56 1.2E-05 43.7 5.5 44 234-277 301-344 (394)
152 PRK09258 3-oxoacyl-(acyl carri 90.1 0.53 1.1E-05 42.6 5.1 83 58-151 238-326 (338)
153 cd00825 decarbox_cond_enzymes 90.0 1.4 3.1E-05 39.4 7.8 78 58-138 204-286 (332)
154 PLN02287 3-ketoacyl-CoA thiola 90.0 0.33 7.1E-06 46.1 3.7 44 234-277 340-383 (452)
155 cd00327 cond_enzymes Condensin 89.9 3.5 7.6E-05 35.2 9.9 77 57-138 143-226 (254)
156 PRK08257 acetyl-CoA acetyltran 89.8 2.1 4.6E-05 41.2 9.1 68 22-89 250-322 (498)
157 PRK08242 acetyl-CoA acetyltran 89.8 0.82 1.8E-05 42.7 6.2 43 234-277 309-352 (402)
158 PRK08947 fadA 3-ketoacyl-CoA t 89.7 1.1 2.3E-05 41.8 6.8 46 234-279 291-339 (387)
159 PRK07661 acetyl-CoA acetyltran 89.7 0.77 1.7E-05 42.7 5.9 44 234-277 298-341 (391)
160 PRK06954 acetyl-CoA acetyltran 89.6 0.33 7.2E-06 45.3 3.4 45 234-278 304-348 (397)
161 PRK07515 3-oxoacyl-(acyl carri 89.4 0.63 1.4E-05 42.9 5.1 84 58-150 270-358 (372)
162 TIGR02445 fadA fatty oxidation 89.0 1 2.2E-05 41.8 6.2 46 234-279 289-337 (385)
163 PRK06504 acetyl-CoA acetyltran 88.8 0.6 1.3E-05 43.4 4.5 45 234-278 297-341 (390)
164 CHL00203 fabH 3-oxoacyl-acyl-c 88.6 0.61 1.3E-05 42.1 4.3 80 60-150 227-312 (326)
165 PRK06840 hypothetical protein; 87.9 3.6 7.8E-05 37.2 9.0 80 60-150 238-322 (339)
166 PRK12879 3-oxoacyl-(acyl carri 87.8 0.76 1.7E-05 41.2 4.4 80 60-150 226-311 (325)
167 cd00826 nondecarbox_cond_enzym 87.7 0.58 1.2E-05 43.6 3.7 36 234-269 278-313 (393)
168 PRK08235 acetyl-CoA acetyltran 87.7 0.79 1.7E-05 42.7 4.5 45 234-278 300-344 (393)
169 PLN02326 3-oxoacyl-[acyl-carri 87.7 1.7 3.8E-05 40.1 6.8 81 59-150 280-366 (379)
170 PRK06445 acetyl-CoA acetyltran 87.7 1.6 3.5E-05 40.6 6.6 44 234-278 301-345 (394)
171 PRK06205 acetyl-CoA acetyltran 87.6 3.2 7E-05 38.8 8.6 59 22-84 265-323 (404)
172 PRK06366 acetyl-CoA acetyltran 86.6 3.2 7E-05 38.5 7.9 109 22-147 252-370 (388)
173 TIGR01930 AcCoA-C-Actrans acet 85.6 6.9 0.00015 36.3 9.6 25 61-85 288-312 (386)
174 COG0304 FabB 3-oxoacyl-(acyl-c 85.5 1.9 4.1E-05 40.5 5.8 45 60-105 277-322 (412)
175 PRK07937 lipid-transfer protei 85.0 9.1 0.0002 35.1 10.0 59 22-85 212-273 (352)
176 PRK09050 beta-ketoadipyl CoA t 84.1 4.3 9.4E-05 37.9 7.5 23 61-83 299-321 (401)
177 PRK09052 acetyl-CoA acetyltran 84.0 8.5 0.00018 35.9 9.5 24 60-83 298-321 (399)
178 PRK07204 3-oxoacyl-(acyl carri 83.8 2.7 5.9E-05 37.8 6.0 81 59-150 230-316 (329)
179 KOG1202 Animal-type fatty acid 83.7 2.6 5.5E-05 44.4 6.0 173 57-257 87-308 (2376)
180 TIGR00747 fabH 3-oxoacyl-(acyl 83.0 2.7 5.8E-05 37.6 5.6 81 59-150 219-305 (318)
181 cd00831 CHS_like Chalcone and 82.4 4.7 0.0001 36.8 7.1 82 58-150 258-350 (361)
182 PRK05963 3-oxoacyl-(acyl carri 82.2 3.8 8.3E-05 36.8 6.3 82 58-150 226-313 (326)
183 PRK07850 acetyl-CoA acetyltran 81.9 16 0.00035 33.9 10.4 59 22-85 252-311 (387)
184 PLN02644 acetyl-CoA C-acetyltr 80.9 2.8 6.1E-05 39.0 5.0 44 234-277 300-343 (394)
185 PRK06158 thiolase; Provisional 80.9 2 4.3E-05 39.8 4.0 29 59-87 254-282 (384)
186 cd00828 elong_cond_enzymes "el 80.4 5.4 0.00012 37.0 6.8 78 59-138 274-357 (407)
187 PTZ00455 3-ketoacyl-CoA thiola 80.2 2.1 4.6E-05 40.5 4.0 64 22-86 266-336 (438)
188 KOG1394 3-oxoacyl-(acyl-carrie 79.9 1.5 3.3E-05 39.9 2.7 42 48-90 291-333 (440)
189 PRK06289 acetyl-CoA acetyltran 79.5 2.4 5.2E-05 39.6 4.1 26 60-85 277-302 (403)
190 PRK08142 acetyl-CoA acetyltran 79.4 3 6.4E-05 38.8 4.6 64 22-87 218-283 (388)
191 cd00834 KAS_I_II Beta-ketoacyl 78.8 3.9 8.4E-05 37.8 5.2 80 59-140 275-360 (406)
192 PRK13359 beta-ketoadipyl CoA t 78.8 8.2 0.00018 36.1 7.3 23 61-83 298-320 (400)
193 TIGR02430 pcaF beta-ketoadipyl 78.7 7 0.00015 36.5 6.8 23 61-83 298-320 (400)
194 cd00830 KAS_III Ketoacyl-acyl 78.5 5.2 0.00011 35.6 5.8 82 58-150 222-309 (320)
195 PRK09352 3-oxoacyl-(acyl carri 78.3 5.6 0.00012 35.5 6.0 81 59-150 219-305 (319)
196 PRK07108 acetyl-CoA acetyltran 78.0 2.3 4.9E-05 39.6 3.4 24 60-83 291-314 (392)
197 PF02803 Thiolase_C: Thiolase, 77.9 1.8 3.9E-05 33.4 2.3 43 235-277 32-74 (123)
198 PRK08313 acetyl-CoA acetyltran 77.3 4.6 9.9E-05 37.5 5.2 65 22-87 216-285 (386)
199 PRK06066 acetyl-CoA acetyltran 77.2 3 6.4E-05 38.8 3.9 24 62-85 259-284 (385)
200 PRK06065 acetyl-CoA acetyltran 77.1 4.1 8.8E-05 38.0 4.8 65 22-87 224-292 (392)
201 PRK07910 3-oxoacyl-(acyl carri 76.5 12 0.00027 35.0 7.9 45 60-105 287-332 (418)
202 PRK07855 lipid-transfer protei 76.0 3.2 6.8E-05 38.6 3.8 26 61-86 268-293 (386)
203 PRK06519 3-oxoacyl-(acyl carri 75.8 7.5 0.00016 36.3 6.2 30 60-90 281-311 (398)
204 PF02803 Thiolase_C: Thiolase, 75.6 2 4.3E-05 33.2 1.9 76 60-147 23-107 (123)
205 KOG2708 Predicted metalloprote 75.3 13 0.00027 32.1 6.7 86 59-154 51-137 (336)
206 PRK08722 3-oxoacyl-(acyl carri 75.3 11 0.00023 35.4 7.1 46 60-106 279-325 (414)
207 PRK14691 3-oxoacyl-(acyl carri 75.1 8.7 0.00019 35.1 6.3 47 58-105 205-252 (342)
208 PRK09185 3-oxoacyl-(acyl carri 74.9 6.5 0.00014 36.5 5.5 74 61-139 262-341 (392)
209 PRK12880 3-oxoacyl-(acyl carri 74.8 9.6 0.00021 34.9 6.6 71 58-139 241-317 (353)
210 PRK08963 fadI 3-ketoacyl-CoA t 74.7 4.1 8.8E-05 38.4 4.2 29 59-87 309-337 (428)
211 cd00832 CLF Chain-length facto 74.5 7.2 0.00016 36.4 5.7 78 58-139 269-352 (399)
212 PRK07851 acetyl-CoA acetyltran 74.3 3.5 7.6E-05 38.6 3.6 22 61-82 305-326 (406)
213 PRK09268 acetyl-CoA acetyltran 74.2 3.6 7.7E-05 38.8 3.6 64 22-86 272-336 (427)
214 PRK06501 3-oxoacyl-(acyl carri 73.9 9.7 0.00021 35.8 6.5 30 61-90 291-321 (425)
215 TIGR03150 fabF beta-ketoacyl-a 73.5 7.5 0.00016 36.0 5.7 43 61-104 277-320 (407)
216 PRK06633 acetyl-CoA acetyltran 73.0 4.2 9.2E-05 37.9 3.8 24 60-83 291-314 (392)
217 PLN02787 3-oxoacyl-[acyl-carri 72.8 6.6 0.00014 38.2 5.2 30 61-90 407-437 (540)
218 cd00829 SCP-x_thiolase Thiolas 72.4 6.2 0.00013 36.2 4.8 29 59-87 251-279 (375)
219 TIGR01835 HMG-CoA-S_prok 3-hyd 71.1 8.4 0.00018 35.6 5.3 29 58-86 204-232 (379)
220 PRK06064 acetyl-CoA acetyltran 70.9 5.2 0.00011 37.0 3.9 27 60-86 259-285 (389)
221 PRK07314 3-oxoacyl-(acyl carri 70.5 12 0.00025 34.9 6.2 77 61-139 278-360 (411)
222 cd00833 PKS polyketide synthas 70.4 12 0.00026 34.6 6.3 32 58-89 278-310 (421)
223 PRK06157 acetyl-CoA acetyltran 70.3 6.8 0.00015 36.5 4.5 25 61-85 268-294 (398)
224 PRK08131 acetyl-CoA acetyltran 70.2 5.2 0.00011 37.4 3.7 24 60-83 297-320 (401)
225 PRK05952 3-oxoacyl-(acyl carri 70.1 7.7 0.00017 36.0 4.8 32 59-90 254-286 (381)
226 PF02801 Ketoacyl-synt_C: Beta 69.5 5.9 0.00013 30.0 3.3 27 234-260 34-60 (119)
227 COG3425 PksG 3-hydroxy-3-methy 69.2 26 0.00056 32.4 7.8 96 57-174 207-307 (377)
228 PRK06059 lipid-transfer protei 68.7 5.5 0.00012 37.1 3.6 26 61-86 275-300 (399)
229 PTZ00050 3-oxoacyl-acyl carrie 68.7 18 0.00038 34.0 7.0 30 59-88 283-314 (421)
230 KOG1390 Acetyl-CoA acetyltrans 68.4 3.3 7E-05 37.2 1.8 33 235-267 304-336 (396)
231 TIGR02446 FadI fatty oxidation 67.5 5.5 0.00012 37.6 3.3 24 62-85 314-337 (430)
232 PRK08170 acetyl-CoA acetyltran 67.2 6.8 0.00015 36.9 3.9 25 61-85 309-333 (426)
233 COG0332 FabH 3-oxoacyl-[acyl-c 66.5 9.5 0.00021 34.6 4.5 29 57-85 221-249 (323)
234 PLN03169 chalcone synthase fam 65.0 38 0.00081 31.5 8.3 83 61-150 283-375 (391)
235 smart00825 PKS_KS Beta-ketoacy 64.7 20 0.00044 33.3 6.6 32 58-89 278-310 (424)
236 cd00827 init_cond_enzymes "ini 64.7 20 0.00044 31.8 6.4 84 57-151 221-314 (324)
237 PRK08304 stage V sporulation p 63.9 58 0.0013 29.7 8.9 88 58-153 204-312 (337)
238 PLN02836 3-oxoacyl-[acyl-carri 63.2 17 0.00036 34.4 5.7 31 59-89 299-330 (437)
239 PLN02377 3-ketoacyl-CoA syntha 61.3 16 0.00035 35.2 5.2 43 233-275 182-230 (502)
240 PRK06333 3-oxoacyl-(acyl carri 59.0 28 0.00061 32.5 6.4 31 59-89 288-319 (424)
241 KOG1406 Peroxisomal 3-ketoacyl 58.8 11 0.00023 33.2 3.2 31 58-88 271-301 (408)
242 PRK09116 3-oxoacyl-(acyl carri 58.7 10 0.00023 35.4 3.4 45 59-104 275-320 (405)
243 PF08392 FAE1_CUT1_RppA: FAE1/ 57.8 19 0.00041 32.1 4.7 43 233-275 93-141 (290)
244 PRK07103 polyketide beta-ketoa 57.2 7.4 0.00016 36.4 2.2 29 61-89 283-312 (410)
245 PF00195 Chal_sti_synt_N: Chal 55.8 28 0.00062 29.8 5.3 36 233-268 110-149 (226)
246 PRK09604 UGMP family protein; 52.0 54 0.0012 29.7 6.9 30 57-86 51-80 (332)
247 PRK07801 acetyl-CoA acetyltran 50.0 15 0.00032 34.0 2.9 45 234-278 289-333 (382)
248 PRK14878 UGMP family protein; 49.7 92 0.002 28.1 8.0 27 60-86 47-73 (323)
249 PLN03170 chalcone synthase; Pr 48.8 60 0.0013 30.3 6.8 67 58-132 280-354 (401)
250 TIGR02845 spore_V_AD stage V s 47.3 1.2E+02 0.0027 27.5 8.1 88 58-153 198-305 (327)
251 PLN02192 3-ketoacyl-CoA syntha 47.1 34 0.00074 33.1 4.9 43 233-275 186-234 (511)
252 PLN02932 3-ketoacyl-CoA syntha 46.0 39 0.00085 32.4 5.1 43 233-275 158-206 (478)
253 PLN02854 3-ketoacyl-CoA syntha 44.5 34 0.00073 33.2 4.5 43 233-275 198-246 (521)
254 PLN03172 chalcone synthase fam 43.4 57 0.0012 30.4 5.7 37 233-269 112-152 (393)
255 TIGR03285 methan_mark_14 putat 43.1 26 0.00056 32.2 3.2 34 53-86 61-94 (445)
256 PRK12404 stage V sporulation p 42.9 59 0.0013 29.5 5.4 35 233-267 64-100 (334)
257 TIGR01796 CM_mono_aroH monofun 42.5 37 0.00081 25.9 3.5 48 65-118 26-75 (117)
258 PLN03171 chalcone synthase-lik 41.9 1.7E+02 0.0037 27.2 8.7 85 57-150 277-381 (399)
259 TIGR03725 bact_YeaZ universal 41.6 49 0.0011 27.6 4.6 32 56-87 32-63 (202)
260 COG1214 Inactive homolog of me 41.4 74 0.0016 27.1 5.7 62 55-118 35-96 (220)
261 TIGR00329 gcp_kae1 metallohydr 41.1 51 0.0011 29.5 4.9 29 58-86 49-77 (305)
262 PLN03173 chalcone synthase; Pr 39.6 59 0.0013 30.3 5.2 37 233-269 112-152 (391)
263 PF07736 CM_1: Chorismate muta 39.3 48 0.001 25.4 3.7 49 64-118 25-75 (118)
264 COG0533 QRI7 Metal-dependent p 37.7 88 0.0019 28.6 5.7 85 59-154 52-139 (342)
265 TIGR02813 omega_3_PfaA polyket 37.5 65 0.0014 37.6 5.9 79 61-140 317-403 (2582)
266 PF01890 CbiG_C: Cobalamin syn 35.9 50 0.0011 25.2 3.4 38 41-85 4-41 (121)
267 PRK07027 cobalamin biosynthesi 35.3 36 0.00077 26.3 2.5 39 40-85 5-43 (126)
268 PF00814 Peptidase_M22: Glycop 35.1 44 0.00096 29.3 3.4 29 58-86 30-58 (268)
269 PLN03168 chalcone synthase; Pr 34.7 51 0.0011 30.7 3.9 52 215-269 95-151 (389)
270 TIGR02177 PorB_KorB 2-oxoacid: 34.4 2E+02 0.0043 25.6 7.4 20 60-79 11-30 (287)
271 PLN00415 3-ketoacyl-CoA syntha 34.3 50 0.0011 31.5 3.8 39 234-272 145-188 (466)
272 PF14574 DUF4445: Domain of un 33.6 35 0.00076 32.0 2.7 48 57-108 302-353 (412)
273 PF02662 FlpD: Methyl-viologen 33.0 42 0.00091 25.8 2.6 31 58-88 75-105 (124)
274 TIGR03722 arch_KAE1 universal 33.0 43 0.00094 30.2 3.1 26 61-86 49-74 (322)
275 KOG2707 Predicted metalloprote 32.6 52 0.0011 30.2 3.4 26 61-86 86-111 (405)
276 PF05378 Hydant_A_N: Hydantoin 32.3 54 0.0012 26.8 3.3 34 54-87 32-65 (176)
277 PRK09585 anmK anhydro-N-acetyl 32.1 57 0.0012 30.2 3.7 34 57-90 69-102 (365)
278 TIGR02714 amido_AtzD_TrzD ring 31.6 1.9E+02 0.004 26.5 6.7 27 57-83 131-158 (366)
279 PF09887 DUF2114: Uncharacteri 30.8 61 0.0013 30.0 3.5 34 53-86 63-97 (448)
280 PRK06365 acetyl-CoA acetyltran 30.6 48 0.001 31.3 3.1 35 234-268 302-338 (430)
281 TIGR03723 bact_gcp putative gl 30.0 1E+02 0.0022 27.8 4.9 31 57-87 49-79 (314)
282 PF07451 SpoVAD: Stage V sporu 29.9 57 0.0012 29.4 3.2 18 234-251 62-79 (329)
283 PF04430 DUF498: Protein of un 29.8 47 0.001 24.8 2.3 46 76-125 51-96 (110)
284 KOG1389 3-oxoacyl CoA thiolase 29.5 47 0.001 30.0 2.6 33 235-267 330-362 (435)
285 PRK02269 ribose-phosphate pyro 29.0 2.6E+02 0.0056 25.3 7.4 88 65-154 75-176 (320)
286 PF09663 Amido_AtzD_TrzD: Amid 28.8 2.1E+02 0.0047 26.1 6.6 70 57-134 130-202 (365)
287 PRK13410 molecular chaperone D 27.9 1E+02 0.0023 30.9 5.1 68 57-131 307-375 (668)
288 PF02817 E3_binding: e3 bindin 26.7 43 0.00093 20.1 1.3 18 63-80 7-24 (39)
289 KOG1392 Acetyl-CoA acetyltrans 26.5 20 0.00044 31.8 -0.2 21 234-254 353-373 (465)
290 PTZ00340 O-sialoglycoprotein e 26.1 1.4E+02 0.003 27.4 5.1 29 58-86 50-78 (345)
291 PRK05183 hscA chaperone protei 26.0 2.6E+02 0.0056 27.8 7.4 45 59-105 309-353 (616)
292 PTZ00186 heat shock 70 kDa pre 25.2 1.6E+02 0.0035 29.6 5.8 65 59-130 334-399 (657)
293 TIGR01991 HscA Fe-S protein as 24.9 2.7E+02 0.0057 27.6 7.2 46 58-105 292-337 (599)
294 cd00248 Mth938-like Mth938-lik 24.5 1.4E+02 0.003 22.3 4.1 60 57-125 36-95 (109)
295 KOG1794 N-Acetylglucosamine ki 24.0 1.3E+02 0.0028 27.0 4.3 112 53-177 41-165 (336)
296 TIGR03285 methan_mark_14 putat 23.8 1E+02 0.0022 28.4 3.7 32 219-252 63-94 (445)
297 PRK05788 cobalamin biosynthesi 23.7 1E+02 0.0022 27.9 3.7 41 38-85 194-234 (315)
298 cd01452 VWA_26S_proteasome_sub 23.5 4.2E+02 0.0091 21.9 7.1 85 57-152 25-118 (187)
299 PRK03092 ribose-phosphate pyro 23.3 3.2E+02 0.0069 24.5 6.9 86 66-154 60-159 (304)
300 KOG3363 Uncharacterized conser 23.2 1.2E+02 0.0025 24.7 3.5 46 77-124 110-155 (196)
301 PLN03184 chloroplast Hsp70; Pr 22.7 1.6E+02 0.0035 29.6 5.3 66 58-130 345-411 (673)
302 cd05560 Xcc1710_like Xcc1710_l 22.4 1.4E+02 0.003 22.3 3.7 59 57-125 37-95 (109)
303 COG0533 QRI7 Metal-dependent p 21.9 1.3E+02 0.0027 27.6 3.9 31 220-253 50-80 (342)
304 COG2185 Sbm Methylmalonyl-CoA 21.8 2.3E+02 0.005 22.5 4.9 15 60-74 27-41 (143)
305 PRK00290 dnaK molecular chaper 21.6 1.9E+02 0.0042 28.6 5.6 46 58-105 306-351 (627)
306 KOG2708 Predicted metalloprote 21.5 1.9E+02 0.0041 25.1 4.6 19 234-252 60-78 (336)
307 PRK11867 2-oxoglutarate ferred 21.5 2.9E+02 0.0062 24.5 6.1 20 60-79 27-46 (286)
308 PF03702 UPF0075: Uncharacteri 20.6 95 0.0021 28.7 3.0 33 57-89 66-98 (364)
309 TIGR01251 ribP_PPkin ribose-ph 20.5 3.7E+02 0.008 24.0 6.7 95 54-154 62-170 (308)
310 COG1908 FrhD Coenzyme F420-red 20.4 1.1E+02 0.0023 23.7 2.6 96 8-108 29-125 (132)
311 cd05125 Mth938_2P1-like Mth938 20.3 1.3E+02 0.0027 22.8 3.1 62 56-125 36-97 (114)
No 1
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1e-57 Score=404.59 Aligned_cols=263 Identities=21% Similarity=0.206 Sum_probs=230.8
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
++++|.++|.|+|++.++|+++++..+++++||.+.+|.|+||++.++|+.++|+++|+++||+++|++|+|||+||++|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT 81 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT 81 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999999999999998888888899999999999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc----ccCCCCCc
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARP 162 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s----~~~~~~~~ 162 (280)
+||++..|++|+.||..|+ ++++.+||++.+|+||++||.+|..++++|.+ ++||||++|.+| +.++.+..
T Consensus 82 ~tpd~~~Ps~A~~vq~~LG---~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~--k~vLVVg~e~~S~~ld~~dR~t~v 156 (323)
T COG0332 82 STPDHLFPSTACLVQARLG---LGGAPAFDLQAACSGFLYALSVADGLIRSGGY--KNVLVVGAETLSRILDWTDRDTCV 156 (323)
T ss_pred CCcccCCChHHHHHHHHhC---CCCcceeechhhhHHHHHHHHHHHHHHHcCCC--CEEEEEehhHhhccCCHhhccceE
Confidence 9999999999999887775 46689999999999999999999999999977 999999999997 34677899
Q ss_pred ccCCceEEEEECCCC-CceeeccccccccccccccccCCCCCcc---------cccCCcchHHHHHHHHHHHHHHHHHHH
Q 023575 163 TGGAAAVAMLIGPDA-PIAFESKLRGSHMSHAYDFYKPNLASEY---------PVVDGKLSQTCYLMALDSCYKYFCQKF 232 (280)
Q Consensus 163 ~fGDgAaA~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~ 232 (280)
+|||||+|+||++.+ ..+++...+++++......+.+.++... ..++| .++|.++++.+.+.+.
T Consensus 157 lFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~G---r~vfk~av~~~~~~~~--- 230 (323)
T COG0332 157 LFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDG---REVFKFAVRAMPKAIE--- 230 (323)
T ss_pred EEcCCceEEEEecCCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeecc---HHHHHHHHHHHHHHHH---
Confidence 999999999999986 5678877778888876555555442211 11222 4788888888888875
Q ss_pred HhhhcCCCCccCccEEecCCCChHHHHHHHHHhhh------hhhhc--cCCCCCCC
Q 023575 233 EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFF------NDFLR--NASLPSIC 280 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~------~~~~~--NtssasI~ 280 (280)
+.|+++|++++|||||+|||+|.+|++.+.++|++ .++++ ||||||||
T Consensus 231 ~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsip 286 (323)
T COG0332 231 EVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIP 286 (323)
T ss_pred HHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHH
Confidence 45999999999999999999999999999999987 34566 99999997
No 2
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=3.6e-50 Score=372.89 Aligned_cols=267 Identities=86% Similarity=1.412 Sum_probs=238.8
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 6 ~~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
+++++|.++|.|+|+++|+|+++++..|.+++|+.+||++|++.+++++|++.+||++|++++|+++|++|++||+||++
T Consensus 2 ~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliva 81 (459)
T PLN02577 2 PKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVG 81 (459)
T ss_pred CCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 46899999999999999999999999999999998899999888888999999999999999999999999999999999
Q ss_pred cccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCCCCCcccC
Q 023575 86 SETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGG 165 (280)
Q Consensus 86 t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~~~~~~fG 165 (280)
|+||++..|+++++|+++++++|.+++.+||++++|+||++||.+|.++|++|.+++++||||++|..++...+...++|
T Consensus 82 TeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~t~G 161 (459)
T PLN02577 82 SETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARPTGG 161 (459)
T ss_pred cCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCCCCCC
Confidence 99999999999999999999989888999999999999999999999999998645699999999999876556778899
Q ss_pred CceEEEEECCCCCceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCc
Q 023575 166 AAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245 (280)
Q Consensus 166 DgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dI 245 (280)
|||+|+||+++++..+.....++++.+..+||+|..+..++.+||+++...|.+.+..+++.+.++.+.+...|++++|+
T Consensus 162 dGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~ 241 (459)
T PLN02577 162 AGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDA 241 (459)
T ss_pred cceEEEEEccCCCceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHc
Confidence 99999999987654444444567888889999998766778999999999999999999998865433345569999999
Q ss_pred cEEecCCCChHHHHHHHHHhhhhhhhc
Q 023575 246 DYFVFHSPYNKLVQKSFARLFFNDFLR 272 (280)
Q Consensus 246 d~~v~Hq~n~~~~~~~~~~l~~~~~~~ 272 (280)
|+++||||+.||.++..++|.++++.+
T Consensus 242 d~~vfHqP~~km~~ka~~~l~~~~~~~ 268 (459)
T PLN02577 242 DYFVFHAPYNKLVQKSFARLVYNDFQR 268 (459)
T ss_pred CEEEecCCccchhHHHHHHHhhhhhhh
Confidence 999999999999999999998876553
No 3
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.3e-47 Score=347.72 Aligned_cols=266 Identities=21% Similarity=0.174 Sum_probs=206.8
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhhCCCCC----eeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCcc
Q 023575 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKG----KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIG 80 (280)
Q Consensus 5 ~~~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~----~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id 80 (280)
++++++|.++|+|+|+++++|+++.+....+.. ++...+|.++|+++.++|++.+|+++|+++||+++|++++|||
T Consensus 4 ~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId 83 (353)
T PRK12880 4 RFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLD 83 (353)
T ss_pred cccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 477899999999999999999986443322222 3556788888889989999999999999999999999999999
Q ss_pred EEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----c
Q 023575 81 RLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----A 156 (280)
Q Consensus 81 ~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~ 156 (280)
+||++|+||++..|+++++|++.|++. +++.+||+++||+||++||++|.+++++|.. + +|||++|.+|. .
T Consensus 84 ~lI~~t~t~d~~~P~~a~~v~~~Lg~~--~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~--~-~LVv~~e~~S~~~~~~ 158 (353)
T PRK12880 84 ALIVVTQSPDFFMPSTACYLHQLLNLS--SKTIAFDLGQACAGYLYGLFVAHSLIQSGLG--K-ILLICGDTLSKFIHPK 158 (353)
T ss_pred EEEEEcCCCCCCCCcHHHHHHHHhCCC--CCceEEehhhhhHHHHHHHHHHHHHHHcCCC--C-EEEEEehhhhccCCcc
Confidence 999999999999999999988888642 3688999999999999999999999999953 7 99999999872 2
Q ss_pred CCCCCcccCCceEEEEECCCCC-ceeeccccccccccccccccCCCCCcccccC---------------C-cc---hHHH
Q 023575 157 EGPARPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVVD---------------G-KL---SQTC 216 (280)
Q Consensus 157 ~~~~~~~fGDgAaA~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------g-~~---~~~~ 216 (280)
++....+|||||+|+||++++. ..+ ..+.++++.+..+..|.++...+..+ . .+ ...+
T Consensus 159 d~~~~~lFGDGAaA~vl~~~~~~~~~--~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 236 (353)
T PRK12880 159 NMNLAPIFGDGVSATLIEKTDFNEAF--FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANI 236 (353)
T ss_pred cCCceeeecccceEEEEEecCCCCce--EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHH
Confidence 3356789999999999997543 122 12345555444444554432211100 0 00 1345
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------h-hhc--cCCCCCCC
Q 023575 217 YLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------D-FLR--NASLPSIC 280 (280)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~-~~~--NtssasI~ 280 (280)
|.+.+..+++.+. ++|+++|++.+|||+|++||+|.++++.+.++|++. . +.+ ||||||||
T Consensus 237 ~~~~~~~~~~~i~---~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip 306 (353)
T PRK12880 237 FNMALECEPKSFK---EILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLP 306 (353)
T ss_pred HHHHHHHHHHHHH---HHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHH
Confidence 5566665666554 459999999999999999999999999999999872 2 344 99999986
No 4
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=1.3e-46 Score=348.61 Aligned_cols=264 Identities=70% Similarity=1.174 Sum_probs=235.1
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
+++|.++++|+|+++|+|+++++..|.+++|+..|+++|+++++.++|++.+|+++|++++|++++++|++||+||++|.
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te 80 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE 80 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 58999999999999999999999999998899899999988889999999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCCCCCcccCCc
Q 023575 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAA 167 (280)
Q Consensus 88 t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~~~~~~fGDg 167 (280)
|+++..|+.+++|++.|+++|.+++.+||+.++|+|+++||.+|.++++++..++++||||++|...|.+.....++|||
T Consensus 81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaG 160 (454)
T TIGR01833 81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAG 160 (454)
T ss_pred CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccc
Confidence 99999999999999999998888899999999999999999999999999864569999999999888776677899999
Q ss_pred eEEEEECCCCCceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHH-hhhcC----CCCc
Q 023575 168 AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE-KLEGR----QFSM 242 (280)
Q Consensus 168 AaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~L~~~----gl~~ 242 (280)
|+|+||+++++..+......+++.+..+||+|.....+|.+||+++...|.+++..++..+.++.+ ++++. |+++
T Consensus 161 AvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~ 240 (454)
T TIGR01833 161 AVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL 240 (454)
T ss_pred eEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence 999999988765444433568888999999997655589999999999999999999988876542 23333 6889
Q ss_pred cCccEEecCCCChHHHHHHHHHhhhhhhh
Q 023575 243 LDVDYFVFHSPYNKLVQKSFARLFFNDFL 271 (280)
Q Consensus 243 ~dId~~v~Hq~n~~~~~~~~~~l~~~~~~ 271 (280)
+|+|+++||+|+.||.++..+++.+++..
T Consensus 241 ~dfd~~~fH~P~~km~~ka~~~~~~~~~~ 269 (454)
T TIGR01833 241 NDFDYMVFHSPYCKLVQKSLARLLYNDFL 269 (454)
T ss_pred hHcCEEeccCCcccHHHHHHHHHHHhhhh
Confidence 99999999999999999998877655443
No 5
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.3e-46 Score=340.21 Aligned_cols=264 Identities=18% Similarity=0.150 Sum_probs=211.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
+++|.++|+|+|+++++|+++.+.++.+++++...+|.++|++++++|++.+|+++|+++||+++|++++|||+||++|+
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~ 82 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATS 82 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 57899999999999999999999999888888888888888899999999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----cCCCCCcc
Q 023575 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----AEGPARPT 163 (280)
Q Consensus 88 t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~~~~~~ 163 (280)
+|++..|+.+++|++.|++ +++.+||++++|+|+++||++|.++++++ . ++||||++|..+. .++.+..+
T Consensus 83 ~~d~~~p~~a~~v~~~Lg~---~~~~~~di~~~C~g~~~aL~~A~~~l~~~--~-~~aLVv~~d~~s~~~~~~~~~~~~l 156 (326)
T PRK05963 83 TPDHLLPPSAPLLAHRLGL---QNSGAIDLAGACAGFLYALVLADGFVRAQ--G-KPVLVVAANILSRRINMAERASAVL 156 (326)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCceeeccchhhHHHHHHHHHHHHHHcC--C-CeEEEEEechhhccCCccccCceEE
Confidence 9999999999988877754 56789999999999999999999999987 3 8999999999762 22345789
Q ss_pred cCCceEEEEECCCCC--ceeeccccccccccccccccCCCCCccccc-----CC-cc----hHHHHHHHHHHHHHHHHHH
Q 023575 164 GGAAAVAMLIGPDAP--IAFESKLRGSHMSHAYDFYKPNLASEYPVV-----DG-KL----SQTCYLMALDSCYKYFCQK 231 (280)
Q Consensus 164 fGDgAaA~ll~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g-~~----~~~~~~~~~~~~~~~~~~~ 231 (280)
|||||+|+||++++. .+++...+.++++.++.+..|.++...|.. .+ .+ ....|...+..+.+.+.
T Consensus 157 fGDgA~A~ll~~~~~~~~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (326)
T PRK05963 157 FADAAGAVVLAPSAKANSGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQ-- 234 (326)
T ss_pred EeecceEEEEEecCCCCCceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHH--
Confidence 999999999998653 355555455666655444445443322210 00 00 02334444444444443
Q ss_pred HHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 232 ~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
++|+++|++++|||+|+|||+|.++++++.++|++. ++.+ ||+|+|||
T Consensus 235 -~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~ 290 (326)
T PRK05963 235 -NVLASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAASTLETYGNSSAATIP 290 (326)
T ss_pred -HHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHH
Confidence 459999999999999999999999999999999872 3445 99999975
No 6
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.8e-44 Score=321.74 Aligned_cols=266 Identities=15% Similarity=0.111 Sum_probs=204.7
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
+++|.++++|+|+++++|+++.+..+.+.+|+...+|.++|++.. +++..+|+.+|+++||+++|++|+|||+||++|+
T Consensus 4 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~ 82 (329)
T PRK07204 4 YISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASG 82 (329)
T ss_pred CcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 578999999999999999999999998888887778888888877 8999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----cCCCCCcc
Q 023575 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----AEGPARPT 163 (280)
Q Consensus 88 t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~~~~~~ 163 (280)
++++..|+++.++++.|++.+ ..++++|++++|+|+++||.+|..++++|.+ ++||||++|.++. .+..+..+
T Consensus 83 ~~~~~~p~~a~~v~~~lgl~~-~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~~~~l 159 (329)
T PRK07204 83 TIQQAIPCTASLIQEQLGLQH-SGIPCFDINSTCLSFITALDTISYAIECGRY--KRVLIISSEISSVGLNWGQNESCIL 159 (329)
T ss_pred CCCCCCccHHHHHHHHhCCCC-CCceEEEccchhHHHHHHHHHHHHHHHCCCC--CEEEEEEeccccCCCCcccCcceEE
Confidence 999888999999888776432 1368999999999999999999999999965 9999999999862 22345688
Q ss_pred cCCceEEEEECCCCC-ceeeccccccccccccccccCCCCCccc------ccCCcc-----hHHHHHHHHHHHHHHHHHH
Q 023575 164 GGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYP------VVDGKL-----SQTCYLMALDSCYKYFCQK 231 (280)
Q Consensus 164 fGDgAaA~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~-----~~~~~~~~~~~~~~~~~~~ 231 (280)
|||||+|+||++++. .+++.....+++........+.++...+ ...+.+ ..+.+......+.+.+.
T Consensus 160 fGDGAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-- 237 (329)
T PRK07204 160 FGDGAAAVVITKGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFID-- 237 (329)
T ss_pred EecccEEEEEEEcCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHH--
Confidence 999999999998754 3455443444444222111222211111 001110 01333333333344443
Q ss_pred HHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 232 ~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
++|+++|++++|||||++||+|.++++.+.++|++. ++.+ ||+|+|||
T Consensus 238 -~~L~~~gl~~~did~~~~H~~~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~ 293 (329)
T PRK07204 238 -KLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIP 293 (329)
T ss_pred -HHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHH
Confidence 348999999999999999999999999999999872 3455 99999975
No 7
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=1e-43 Score=326.79 Aligned_cols=241 Identities=30% Similarity=0.482 Sum_probs=207.4
Q ss_pred eEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEeccc
Q 023575 9 VGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSET 88 (280)
Q Consensus 9 ~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t 88 (280)
++|.++++|+|+++++++++++..|.+++|+..++|.++|+++.++|++.+|+++|+++||+++ +|++||+||++|+|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s 78 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES 78 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence 5899999999999999999999999999999889999999999999999999999999999998 89999999999999
Q ss_pred CCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCC-CCCcccCCc
Q 023575 89 VIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGGAA 167 (280)
Q Consensus 89 ~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~-~~~~~fGDg 167 (280)
+++..|+++.+|++.|++. .+++++|+.++|+|++.||.+|.++++++.. ++||||++|..++... +...+||||
T Consensus 79 ~~~~~~s~a~~v~~~Lgl~--~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~--~~aLVv~~D~a~~~~~~~~~~~~GdG 154 (379)
T TIGR01835 79 GIDQSKAAAVYVHGLLGLQ--PFCRSFELKQACYGATAALQMAKGHVALSPD--RKVLVIASDIAKYGLESPGEPTQGAG 154 (379)
T ss_pred CCCCCCCHHHHHHHHhCCC--CCceEEEeccccHHHHHHHHHHHHHHHcCCC--CeEEEEEeehhhcccCCCCCccccCc
Confidence 9998899999998888653 2578999999999999999999999999954 9999999999887643 457899999
Q ss_pred eEEEEECCCCCc-eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcc
Q 023575 168 AVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 246 (280)
Q Consensus 168 AaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId 246 (280)
|+|+||++++.. .+... ...++++..++|+|.+ ..++.++|+++.+.|.+.+..+++.+ |+++|++++|||
T Consensus 155 A~A~Ll~~~~~i~~~~~~-~~~~t~~~~df~~p~~-~~~~~v~g~~s~~~y~~~~~~~~~~~------l~~~g~~~~did 226 (379)
T TIGR01835 155 AVAMLVSADPKLLAINED-SVLYTDDIMDFWRPNY-STTALVDGQYSNEQYLNAFENAWNDY------AKRTGLSLADFA 226 (379)
T ss_pred cEEEEEecCCCeeEEecc-ceeeecCCCCccCCCC-CCceeECcHHHHHHHHHHHHHHHHHH------HHHhCCCHHHcC
Confidence 999999987642 22211 1345666678888875 45677788887788888887777766 789999999999
Q ss_pred EEecCCCChHHHHHHHH
Q 023575 247 YFVFHSPYNKLVQKSFA 263 (280)
Q Consensus 247 ~~v~Hq~n~~~~~~~~~ 263 (280)
+|++||+|.++..+..+
T Consensus 227 ~~i~H~p~~~~~~k~~~ 243 (379)
T TIGR01835 227 AFCFHVPFTKMGLKALR 243 (379)
T ss_pred EEEECCCCCcHHHHHHH
Confidence 99999999999665443
No 8
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=9.5e-44 Score=316.50 Aligned_cols=262 Identities=35% Similarity=0.536 Sum_probs=238.1
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
|+++|.+++.|+|.++|+.+|+++.+|.+++++..|+++..+++++.+|++.+||++||+++|.++++||.+|+.|+++|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 57999999999999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCC-CCCcccC
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGG 165 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~-~~~~~fG 165 (280)
.|+++...+.+.+|+++|++. +.+.++|+..+|.++..||+.|.+++.++.. +++|||++|+..+.+. ..+.++|
T Consensus 81 ES~~d~~K~~at~v~~~lg~~--~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~--~~~LvI~sD~a~~~~~~~~E~t~G 156 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGLN--PSARAADVEFACYAGTAALQAAIGWVESGMI--SYGLVIGADTAQYAPGDALEYTAG 156 (377)
T ss_pred CCCcccccchHHHHHHHhCCC--CceehhhHHHHHHHHHHHHHHHHHHHHcCCc--cceEEEeehhhccCCCcccCccCC
Confidence 999999999999999888764 5789999999999999999999999999976 8999999999998766 6789999
Q ss_pred CceEEEEECCCCCceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCc
Q 023575 166 AAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245 (280)
Q Consensus 166 DgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dI 245 (280)
+||+|+||++++....+....++++.+.+|||+|.+. .+|.++|+++.+.|.+.+..+++.+ +++.|++++|+
T Consensus 157 AGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~-~yp~~dg~~s~~~Y~~~~~~a~~~~------~~k~gls~~df 229 (377)
T COG3425 157 AGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQ-PYPYVDGRFSEPAYFKHVENAAKGY------MEKTGLSPDDF 229 (377)
T ss_pred CceEEEEEccCCCeEEEecCceEEecCCCcccccCCC-cccccCceecHHHHHHHHHHHHHHH------HHHhCCChhhh
Confidence 9999999999765544444457899999999999865 7899999999999999999999988 67899999999
Q ss_pred cEEecCCCChHHHHHHHHHhhhhh--------hh-c--cCCCCCC
Q 023575 246 DYFVFHSPYNKLVQKSFARLFFND--------FL-R--NASLPSI 279 (280)
Q Consensus 246 d~~v~Hq~n~~~~~~~~~~l~~~~--------~~-~--NtssasI 279 (280)
|+++|||||.++..++++.+++.. .. + |+-++|+
T Consensus 230 dy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~ 274 (377)
T COG3425 230 DYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSL 274 (377)
T ss_pred CeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhH
Confidence 999999999999999999998741 12 2 8888875
No 9
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=2e-43 Score=321.80 Aligned_cols=261 Identities=27% Similarity=0.339 Sum_probs=202.9
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
|+++|.++|+|+|+++++|+++.+.++.+++|+...+|.++|++++++++..+|+.+|+++||+++|++++|||+||++|
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 57899999999999999999999999998888887778778889999999999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCC-CCCcccC
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGG 165 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~-~~~~~fG 165 (280)
+++++..|+.+.++++.|++. .+++++|++++|+|+++||++|..++++|.+ ++||||++|.....+. ....+||
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl~--~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~--~~aLVv~~e~~~~~~~~~~~~~~G 156 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGAT--PDLTAADLEFACKAGTAALQAAMGLVKSGMI--KYALAIGADTAQGAPGDALEYTAA 156 (347)
T ss_pred cCCCcccccHHHHHHHHcCCC--CCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeeeccCCCCCCCCcCC
Confidence 999988899998877766542 2478899999999999999999999999965 9999999999643321 2346789
Q ss_pred CceEEEEECCCCCc-eeeccccccccccccccccCCCCCcccccCCcchH-HHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 023575 166 AAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSML 243 (280)
Q Consensus 166 DgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gl~~~ 243 (280)
|||+|+||++++.. .+.... ++..+..+++++.+ ...+.....+.. ..+.+.+..+++ ++|+++|++++
T Consensus 157 DGA~A~ll~~~~~~~~i~~~~--~~~~d~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~------~~L~~~gl~~~ 227 (347)
T PRK04262 157 AGGAAFIIGKEEVIAEIEATY--SYTTDTPDFWRREG-EPYPRHGGRFTGEPAYFKHIISAAK------GLMEKLGLKPS 227 (347)
T ss_pred CCcEEEEEecCcccceeeccc--cccccchhhcCCCC-CcCCCcCceecchHHHHHHHHHHHH------HHHHHhCcCHH
Confidence 99999999976542 343321 11122234444322 222222122221 123333333333 34899999999
Q ss_pred CccEEecCCCChHHHHHHHHHhhhh--------hhhc--cCCCCCCC
Q 023575 244 DVDYFVFHSPYNKLVQKSFARLFFN--------DFLR--NASLPSIC 280 (280)
Q Consensus 244 dId~~v~Hq~n~~~~~~~~~~l~~~--------~~~~--NtssasI~ 280 (280)
|||+|+|||+|.++++.+.++|++. .+.+ ||+|||||
T Consensus 228 dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~ 274 (347)
T PRK04262 228 DYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSAL 274 (347)
T ss_pred HhceeecCCCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHH
Confidence 9999999999999999999999872 2345 99999986
No 10
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=6.9e-43 Score=317.74 Aligned_cols=260 Identities=27% Similarity=0.363 Sum_probs=201.9
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
+++|.++|+|+|+++++|+++.+.++.+++|+..++|.++|++++++|+..+|+++|+++||+++|++++|||+||++|+
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~ 80 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE 80 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 36899999999999999999999999888899888888888999999999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCC-CCCcccCC
Q 023575 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGGA 166 (280)
Q Consensus 88 t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~-~~~~~fGD 166 (280)
++++..|+.+..+++.|++. .+++++|++++|+|+++||.+|..++++|.+ +++|||++|..+..+. ....+|||
T Consensus 81 ~~~~~~p~~a~~v~~~LGl~--~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~--~~vLVv~~d~~~~~~~~~~~~~~GD 156 (345)
T TIGR00748 81 SHPYAVKPTATIVAEAIGAT--PDLTAADLEFACKAGTAGIQACMGLVASGMI--KYGLAIGADTAQGAPGDALEYTAGA 156 (345)
T ss_pred CCCccccchHHHHHHHcCCC--CCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeecccCCCccCcccCCC
Confidence 99988899998888777542 2578999999999999999999999999966 9999999999874322 33567899
Q ss_pred ceEEEEECCCCCc-eeeccccccccccccccccCCCCCcccccCCcchH-HHHHHHHHHHHHHHHHHHHhhhcCCCCccC
Q 023575 167 AAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (280)
Q Consensus 167 gAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gl~~~d 244 (280)
||+|+||++++.. .+... .++..+..+++++.+ ..++...+.+.. ..+.+....+++ +.|+++|++++|
T Consensus 157 GAaA~vl~~~~~~~~~~~~--~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~L~~~gl~~~d 227 (345)
T TIGR00748 157 GGAAYIIGEKNTVAYFEGT--YSYTTDTPDFWRREG-EPYPRHGGRFTGEPAYFHHVVTAAK------GLMEKLGLTPED 227 (345)
T ss_pred ceEEEEEccCCcceEeecc--cceecccccccccCC-CcCCCcCCeecChHHHHHHHHHHHH------HHHHHcCCCHHH
Confidence 9999999976542 33221 111111223344321 222222222211 112222222333 348999999999
Q ss_pred ccEEecCCCChHHHHHHHHHhhhh------hh--hc--cCCCCCCC
Q 023575 245 VDYFVFHSPYNKLVQKSFARLFFN------DF--LR--NASLPSIC 280 (280)
Q Consensus 245 Id~~v~Hq~n~~~~~~~~~~l~~~------~~--~~--NtssasI~ 280 (280)
||+|++||+|.++++.+.++|++. ++ .+ ||+|||||
T Consensus 228 id~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsip 273 (345)
T TIGR00748 228 FDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATP 273 (345)
T ss_pred cCEEEeCCCChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHH
Confidence 999999999999999999999872 22 34 99999986
No 11
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=7.1e-43 Score=315.77 Aligned_cols=262 Identities=19% Similarity=0.205 Sum_probs=202.8
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
|.++|.++|+|+|+++|+|+|+++.++.+.+++...+|.++|+++.++++..+|+.+|+++||+++|++|+|||.||++|
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s 80 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILAT 80 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 46899999999999999999999999876777877777778889889999999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----cCCCCCc
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----AEGPARP 162 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~~~~~ 162 (280)
+++++. +..+.++++.|+ ..+++++|++++|+|++.||.+|.+++++|.+ +++|||++|.++. .++....
T Consensus 81 ~~~~~~-~~~~~~v~~~Lg---~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~--~~~Lvv~~e~~s~~~~~~~~~~~~ 154 (326)
T CHL00203 81 STPDDL-FGSASQLQAEIG---ATRAVAFDITAACSGFILALVTATQFIQNGSY--KNILVVGADTLSKWIDWSDRKTCI 154 (326)
T ss_pred CCCCCC-CchHHHHHHHhC---CCCCceeeecccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhhCcCCcccCCceE
Confidence 888754 345666666654 45678999999999999999999999999966 9999999999872 2334578
Q ss_pred ccCCceEEEEECCCCCceeecccccccccccccccc---CCC----C-Cccc-------ccCCcchHHHHHHHHHHHHHH
Q 023575 163 TGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYK---PNL----A-SEYP-------VVDGKLSQTCYLMALDSCYKY 227 (280)
Q Consensus 163 ~fGDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~-~~~~-------~~~g~~~~~~~~~~~~~~~~~ 227 (280)
+|||||+|+||++.+..+++...+.++++....+.. |.. + ...+ .++| .++|...+..+++.
T Consensus 155 ~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~ 231 (326)
T CHL00203 155 LFGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNG---KEVYKFAVFQVPAV 231 (326)
T ss_pred EEcceeeEEEEEEcCCCCeEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECC---HHHHHHHHHHHHHH
Confidence 999999999999865433433333444443221111 100 0 0000 0112 24455555555555
Q ss_pred HHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 228 FCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 228 ~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
+. ++|+++|++++|||||++||+|.++++.+.++|++. ++.+ ||+|||||
T Consensus 232 i~---~~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~ 289 (326)
T CHL00203 232 II---KCLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIP 289 (326)
T ss_pred HH---HHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHH
Confidence 54 359999999999999999999999999999999873 3455 99999975
No 12
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=9.3e-43 Score=320.74 Aligned_cols=265 Identities=15% Similarity=0.155 Sum_probs=203.1
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
++++|.++|+|+|+++++|+++.+.++.+++++...+|.++|+++.++|+..+|+.+|+++||+++|++++|||+||++|
T Consensus 46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s 125 (379)
T PLN02326 46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCT 125 (379)
T ss_pred CCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 57899999999999999999999998877778876677777788888999999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-c---cCCCCCc
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-Y---AEGPARP 162 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-~---~~~~~~~ 162 (280)
+++++. ++.+.++++.|+ .+++++||++++|+|+++||++|.+++++|.+ +++|||++|..+ + .++.+..
T Consensus 126 ~~~~~~-~~~a~~v~~~LG---~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~--~~vLVv~~e~~s~~~~~~d~~~~~ 199 (379)
T PLN02326 126 SSPDDL-FGSAPQVQAALG---CTNALAFDLTAACSGFVLGLVTAARFIRGGGY--KNVLVIGADALSRYVDWTDRGTCI 199 (379)
T ss_pred CCCCcc-CcHHHHHHHHhC---CCCCceeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhcCCCCccccCceE
Confidence 888865 456777776664 45688999999999999999999999999965 999999999986 2 2334567
Q ss_pred ccCCceEEEEECCCCC--ceeeccccccccccccccccCCCCC-------------cccccCCcch------HHHHHHHH
Q 023575 163 TGGAAAVAMLIGPDAP--IAFESKLRGSHMSHAYDFYKPNLAS-------------EYPVVDGKLS------QTCYLMAL 221 (280)
Q Consensus 163 ~fGDgAaA~ll~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~g~~~------~~~~~~~~ 221 (280)
+|||||+|+||++++. .++....+.+++..+..+..+..+. ..+.....+. .+.|...+
T Consensus 200 lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~ 279 (379)
T PLN02326 200 LFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAV 279 (379)
T ss_pred EEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHH
Confidence 9999999999998653 2343333344443332221111110 0010000110 23455555
Q ss_pred HHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 222 DSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 222 ~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
..+++.+. ++|+++|++++|||||++||+|.++++.+.++|++. ++.+ ||+|||||
T Consensus 280 ~~~~~~i~---~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~ 343 (379)
T PLN02326 280 RCVPQVIE---SALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIP 343 (379)
T ss_pred HHHHHHHH---HHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHH
Confidence 55555554 358999999999999999999999999999999872 3444 99999985
No 13
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.4e-42 Score=312.06 Aligned_cols=266 Identities=15% Similarity=0.143 Sum_probs=209.0
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
++++|.++|+|+|+++++++|+.+..+.+.+++...+|.++|+++.++|+..+|+.+|+++||+++|+++++||.||++|
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~ 82 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVAT 82 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 46899999999999999999999988877777776677778889889999999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----cCCCCCc
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----AEGPARP 162 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~~~~~ 162 (280)
+++++..|+.+.++++.|+ ++++++++++++|+|++.||..|.++|++|.+ ++||||++|.++. .++....
T Consensus 83 ~~~~~~~~~~a~~l~~~lg---~~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~~~~ 157 (325)
T PRK12879 83 TTPDYLFPSTASQVQARLG---IPNAAAFDINAACAGFLYGLETANGLITSGLY--KKVLVIGAERLSKVTDYTDRTTCI 157 (325)
T ss_pred CCCCCCCChHHHHHHHHhC---CCCCcEEEECccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCccccCceE
Confidence 9988888999988777665 44578999999999999999999999999965 9999999999762 2234457
Q ss_pred ccCCceEEEEECCCCC-ceeeccccccccccccccccCCCCCcccccC---Cc-c---hHHHHHHHHHHHHHHHHHHHHh
Q 023575 163 TGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVVD---GK-L---SQTCYLMALDSCYKYFCQKFEK 234 (280)
Q Consensus 163 ~fGDgAaA~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~-~---~~~~~~~~~~~~~~~~~~~~~~ 234 (280)
+|||||+|+||++++. .++....+.++++....+..+..+...+... +. + ....+...+..+.+.+. ++
T Consensus 158 ~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~ 234 (325)
T PRK12879 158 LFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGAR---QV 234 (325)
T ss_pred EEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHH---HH
Confidence 8999999999998764 3454444455555444444444333221100 00 0 02344444444444443 45
Q ss_pred hhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 235 LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 235 L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
|+++|++++|||+|++||+|.++++.+.++|++. ++.+ ||+|+|+|
T Consensus 235 L~~~g~~~~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~ 288 (325)
T PRK12879 235 LEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIP 288 (325)
T ss_pred HHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHH
Confidence 8999999999999999999999999999999872 3444 99999975
No 14
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=3.3e-41 Score=306.46 Aligned_cols=267 Identities=15% Similarity=0.096 Sum_probs=204.5
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 6 ~~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
.|+++|.++++|+|+++++|+++.+..|.+.+++...+|.++|+++.++|+..+|+.+|+++||+++|++|+|||+||++
T Consensus 2 ~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 81 (339)
T PRK06840 2 EMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYI 81 (339)
T ss_pred CCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 36899999999999999999999999998888877778888888998899999999999999999999999999999977
Q ss_pred cc-cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHh-cCCCCCeEEEEEeccccc----cCCC
Q 023575 86 SE-TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVES-ASWDGRYGLVVCTDSAVY----AEGP 159 (280)
Q Consensus 86 t~-t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~-g~~~~~~vLvv~~e~~s~----~~~~ 159 (280)
++ ++++..|+.++++++.++ +++++++|++++|+|+++||.+|.+++++ |.+ +++|||++|..+. .+..
T Consensus 82 ~~~~~~~~~p~~a~~l~~~lG---l~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~--~~~Lvv~~~~~s~~~~~~~~~ 156 (339)
T PRK06840 82 GSEHKDYPVWSSAPKIQHEIG---AKNAWAFDIMAVCASFPIALKVAKDLLYSDPSI--ENVLLVGGYRNSDLVDYDNPR 156 (339)
T ss_pred ccCCCCCCCCchHHHHHHHhC---CCCcccccccccchHHHHHHHHHHHHHhcCCCc--cEEEEEeecccccccCcCCCC
Confidence 54 567778999998777765 45678999999999999999999999999 754 8999999998752 2222
Q ss_pred CC--cccCCceEEEEECCCCC-ceeeccccccccccccccccCCCCCccccc-----CCcc-----hHHHHHHHH-----
Q 023575 160 AR--PTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVV-----DGKL-----SQTCYLMAL----- 221 (280)
Q Consensus 160 ~~--~~fGDgAaA~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~-----~~~~~~~~~----- 221 (280)
+. .+|||||+|+||++++. .+++.....++++.+..+..|.++...|.. .+.+ ....+...+
T Consensus 157 ~~~~~~~GDgAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (339)
T PRK06840 157 TRFMFNFAAGGSAALLKKDAGKNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSI 236 (339)
T ss_pred eeeeccCCCceeEEEEEecCCCCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHH
Confidence 33 24799999999998764 355544445565554444445444332211 0110 012222211
Q ss_pred HHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhh-----hhc--cCCCCCCC
Q 023575 222 DSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND-----FLR--NASLPSIC 280 (280)
Q Consensus 222 ~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~-----~~~--NtssasI~ 280 (280)
..+.+.+. ++|+++|++++|||+|++||+|.++++.+.++|++.. +.+ ||+|+|+|
T Consensus 237 ~~~~~~i~---~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~ 299 (339)
T PRK06840 237 PNFLKVIR---EALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQI 299 (339)
T ss_pred HHHHHHHH---HHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHH
Confidence 12233332 3599999999999999999999999999999998732 334 99999975
No 15
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.8e-41 Score=305.89 Aligned_cols=262 Identities=18% Similarity=0.149 Sum_probs=197.2
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhh-------CCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCC
Q 023575 6 PKNVGILALDIYFPPTCVLQEALEVHD-------GVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQ 78 (280)
Q Consensus 6 ~~~~~I~~ig~~lP~~~v~~~~~~~~~-------g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~ 78 (280)
..+++|.++|+|+|+++++|+++.+.+ +.+++++...+|.++|++.+++++..+|+++|+++||+++|+++++
T Consensus 3 ~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~ 82 (338)
T PRK09258 3 YSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSD 82 (338)
T ss_pred ccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHH
Confidence 356999999999999999999998864 3455667666777777888889999999999999999999999999
Q ss_pred ccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccccc--
Q 023575 79 IGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYA-- 156 (280)
Q Consensus 79 Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~-- 156 (280)
||+||++|+++++..|+.+.++++.|++. .+++++|++++|+|++.||++|.+++++|.+ ++||||++|.++..
T Consensus 83 Id~li~~s~~~~~~~p~~a~~v~~~lgl~--~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~--~~~Lvv~~e~~s~~~~ 158 (338)
T PRK09258 83 IGLLINTSVCRDYLEPATACRVHHNLGLP--KSCANFDVSNACLGFLNGMLDAANMIELGQI--DYALVVSGESAREIVE 158 (338)
T ss_pred CCEEEEEcCCCCCCCChHHHHHHHHcCCC--CCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEecccchhcc
Confidence 99999999999988999999877776542 2578999999999999999999999999965 99999999997621
Q ss_pred --------CCC---------CCcccCCceEEEEECCCCC----ceeeccccccccccccccccCCCCCcccccCCcchHH
Q 023575 157 --------EGP---------ARPTGGAAAVAMLIGPDAP----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQT 215 (280)
Q Consensus 157 --------~~~---------~~~~fGDgAaA~ll~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 215 (280)
+.. ...+|||||+|+||++++. ..+......++++... .+.. +......++. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~---~ 232 (338)
T PRK09258 159 ATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEHHE-LCQG--GRDGMRTDAV---G 232 (338)
T ss_pred chhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCccc-cccc--CccceEEcHH---H
Confidence 111 1367999999999998642 1333322223333211 1111 0111112222 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 216 CYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
.+...+..+.+.+. +.|+++|++++|||+|++||+|.++++.+.++|++. ++.+ ||+|+|||
T Consensus 233 ~~~~~~~~~~~~~~---~~L~~~g~~~~did~~i~H~~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~ 302 (338)
T PRK09258 233 LLKEGVELAVDTWE---AFLAQLGWAVEQVDRVICHQVGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLP 302 (338)
T ss_pred HHHHHHHHHHHHHH---HHHHHcCCCHHHCCEEecCCCCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHH
Confidence 22333333334443 348999999999999999999999999999999873 3444 99999975
No 16
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=5e-41 Score=302.53 Aligned_cols=265 Identities=20% Similarity=0.192 Sum_probs=206.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
+++|.++++|+|+++++++++.+.++.+.+++...+|.++|+++.++++..+|+.+|++++|+++|+++++||.||++|+
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 47899999999999999999999998888887777888888899888999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----cCCCCCcc
Q 023575 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----AEGPARPT 163 (280)
Q Consensus 88 t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~~~~~~ 163 (280)
++++..|+.+.++++.+++ +++++++++++|++++.||..|.+++++|.+ +++|||++|..+. .++....+
T Consensus 81 ~~~~~~~~~~~~l~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~~ 155 (320)
T cd00830 81 TPDYLFPATACLVQARLGA---KNAAAFDINAACSGFLYGLSTAAGLIRSGGA--KNVLVVGAETLSRILDWTDRSTAVL 155 (320)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCcEeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCceEE
Confidence 9887789999887777654 4688999999999999999999999999965 9999999999862 22345689
Q ss_pred cCCceEEEEECCCCC-ceeeccccccccccccccccCCCCCccccc----CCc-c---hHHHHHHHHHHHHHHHHHHHHh
Q 023575 164 GGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVV----DGK-L---SQTCYLMALDSCYKYFCQKFEK 234 (280)
Q Consensus 164 fGDgAaA~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~-~---~~~~~~~~~~~~~~~~~~~~~~ 234 (280)
|||||+|+||++++. .+++.....++++..+.+..+.++...|.. .+. + ....+........+.+. ++
T Consensus 156 ~GDgAaA~ll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~ 232 (320)
T cd00830 156 FGDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIE---EA 232 (320)
T ss_pred EeccceEEEEEecCCCCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHH---HH
Confidence 999999999998765 355554445555544433334333222210 000 0 11222222222233332 34
Q ss_pred hhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 235 LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 235 L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
|+++|++++|||+|++||+|.++++.+.+++++. ++.+ |++|+|+|
T Consensus 233 l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~ 286 (320)
T cd00830 233 LEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIP 286 (320)
T ss_pred HHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHH
Confidence 8999999999999999999999999999999872 3444 99999875
No 17
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=6.4e-41 Score=308.95 Aligned_cols=260 Identities=16% Similarity=0.150 Sum_probs=187.6
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh----CCCCCe-------eeeccCceeeecCCC----------------------
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD----GVSKGK-------YTVGLGQDCMAFCSE---------------------- 53 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~----g~~~~~-------~~~~ig~r~~~~~~~---------------------- 53 (280)
+.+.|.++|+++|++.++|+++.+.+ +.+..+ +...+|+++|+++.+
T Consensus 20 ~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 99 (391)
T PLN03169 20 GKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRL 99 (391)
T ss_pred CCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHHH
Confidence 45899999999999999999998752 222332 333344455555431
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCe-eeeeccccCchHHHHHH
Q 023575 54 ---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (280)
Q Consensus 54 ---~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~-~~~dv~~~C~g~~~aL~ 129 (280)
+|++.+|+++|+++||+++|++|+|||+||++|++ ++..|+.+++|++.|++.. .+ .++|++.||+||++||.
T Consensus 100 ~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl~~--~~~~~~d~~~gC~g~~~aL~ 176 (391)
T PLN03169 100 DIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGLSP--DVQRVMLYFLGCSGGVAGLR 176 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCcCC--cceeeecccChhHHHHHHHH
Confidence 56789999999999999999999999999999985 7789999999888886532 33 47999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEeccccc--c--------CCCCCcccCCceEEEEECCCCCc----eeeccccccccccccc
Q 023575 130 NCVNWVESASWDGRYGLVVCTDSAVY--A--------EGPARPTGGAAAVAMLIGPDAPI----AFESKLRGSHMSHAYD 195 (280)
Q Consensus 130 ~A~~~l~~g~~~~~~vLvv~~e~~s~--~--------~~~~~~~fGDgAaA~ll~~~~~~----~~~~~~~~~~~~~~~~ 195 (280)
+|.++++++.. ++||||++|.++. . +..+..+|||||+|+||++++.. .+.. +...+..
T Consensus 177 ~A~~~~~~~~~--~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~--l~~~~~~--- 249 (391)
T PLN03169 177 VAKDIAENNPG--SRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFE--LHTAIQQ--- 249 (391)
T ss_pred HHHHHHHhCCC--CeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceE--EEeeeee---
Confidence 99999999954 9999999999862 1 11346799999999999976431 1111 1111111
Q ss_pred cccCCCCCc--cccc-CCc---chHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcc--EEecCCCChHHHHHHHHHhhh
Q 023575 196 FYKPNLASE--YPVV-DGK---LSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD--YFVFHSPYNKLVQKSFARLFF 267 (280)
Q Consensus 196 ~~~~~~~~~--~~~~-~g~---~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId--~~v~Hq~n~~~~~~~~~~l~~ 267 (280)
..|..... +... +|. ...+++......+.+.+. +.|+++|++++||| +|++||+|.+|++.+.++|++
T Consensus 250 -~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~---~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl 325 (391)
T PLN03169 250 -FLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCK---KLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKL 325 (391)
T ss_pred -EcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHH---HHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCC
Confidence 12221100 0010 111 112444444444444443 34999999999999 999999999999999999987
Q ss_pred h---------hhhc--cCCCCCCC
Q 023575 268 N---------DFLR--NASLPSIC 280 (280)
Q Consensus 268 ~---------~~~~--NtssasI~ 280 (280)
. ++.+ ||||||||
T Consensus 326 ~~ek~~~s~~~l~~~GNtsSasip 349 (391)
T PLN03169 326 APEKLECSRRALMDYGNVSSNTIV 349 (391)
T ss_pred CHHHHHHHHHHHHHhCCchHhHHH
Confidence 2 2444 99999986
No 18
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-40 Score=306.64 Aligned_cols=265 Identities=17% Similarity=0.114 Sum_probs=188.5
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCC-------CeeeeccCceeeecCCC-----CCCHHHHHHHHHHHHHHHcCC
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSK-------GKYTVGLGQDCMAFCSE-----VEDVISMSLTVVTSLLEKYKI 74 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~-------~~~~~~ig~r~~~~~~~-----~e~~~~la~~Aa~~aL~~agi 74 (280)
|+++|.++|+|+|+++++|+++.+.++... +|+...+|.++|+++.+ .++..+|+++|+++||+++|+
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999988776421 35554455555556532 357899999999999999999
Q ss_pred CCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc
Q 023575 75 DPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 75 ~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
+++|||+||++|+++++..|+.+..+++.|+ +++++++|++++|+|+++||.+|..++++|.+ ++||||++|.+|
T Consensus 81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lg---l~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~--~~vLvv~~E~~s 155 (378)
T PRK06816 81 SLGDIELLACGTSQPDQLMPGHASMVHGELG---APPIEVVSSAGVCAAGMMALKYAYLSVKAGES--RNAVATASELAS 155 (378)
T ss_pred CHHHCCEEEEEECCCCcCChHHHHHHHhhCC---CCCCceeeecCcCHHHHHHHHHHHHHHHCCCC--CEEEEEeEccch
Confidence 9999999999999998888988887766664 45578999999999999999999999999965 999999999986
Q ss_pred c--c-----C---------CCC---------CcccCCceEEEEECCCCC-cee-ec---cccccccccccccccCCCCCc
Q 023575 155 Y--A-----E---------GPA---------RPTGGAAAVAMLIGPDAP-IAF-ES---KLRGSHMSHAYDFYKPNLASE 204 (280)
Q Consensus 155 ~--~-----~---------~~~---------~~~fGDgAaA~ll~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~ 204 (280)
. . . +.. ..+|||||+|+||++.+. .++ +. ....++..+.. .+.+.++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~~-~~~~~g~~~ 234 (378)
T PRK06816 156 RWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGELP-VCMYAGAEK 234 (378)
T ss_pred hhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeecccccCc-cceecCCcc
Confidence 2 1 0 101 237999999999997654 232 11 11122222211 112111111
Q ss_pred cc---------------ccCCcchHHHH-----HHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHH
Q 023575 205 YP---------------VVDGKLSQTCY-----LMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFAR 264 (280)
Q Consensus 205 ~~---------------~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~ 264 (280)
.+ ..++.+.+... ......+++.+. ++|+++|++++|||+|+|||+|.++++.+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~ 311 (378)
T PRK06816 235 NEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLL---ELVDKRNLDPDDIDYFLPHYSSEYFREKIVEL 311 (378)
T ss_pred CCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHH---HHHHHcCCChhhCCEEeeCcccHHHHHHHHHH
Confidence 00 01122111111 111222233443 45999999999999999999999999999998
Q ss_pred h-----hh------hhhhc--cCCCCCCC
Q 023575 265 L-----FF------NDFLR--NASLPSIC 280 (280)
Q Consensus 265 l-----~~------~~~~~--NtssasI~ 280 (280)
| ++ .++++ ||+|||||
T Consensus 312 l~~~~~gl~~~k~~~~~~~~GNt~sAsip 340 (378)
T PRK06816 312 LAKAGFMIPEEKWFTNLATVGNTGSASIY 340 (378)
T ss_pred HHhccCCCChhheEEeccccccccchHHH
Confidence 7 54 24566 99999986
No 19
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=7.5e-40 Score=294.95 Aligned_cols=266 Identities=20% Similarity=0.194 Sum_probs=205.4
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
|.++|.++++|+|+++++++++.+.++.+++++....|.++|+++.+++++.+|+.+|+++||+++|++|++||.||+++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~ 80 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVAT 80 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 46899999999999999999999998877667766677777789889999999999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----cCCCCCc
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----AEGPARP 162 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~~~~~ 162 (280)
+++++..|+.+.++++.++ ++++++++++++|++++.||+.|..++++|.+ +++|||++|..+. .++....
T Consensus 81 ~~~~~~~~~~a~~l~~~lG---l~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~~Lvv~~e~~~~~~~~~~~~~~~ 155 (318)
T TIGR00747 81 TTPDHAFPSAACMVQAYLG---IKGIPAFDLSAACAGFIYALSVAKQYIESGKY--KTVLVVGAEKLSSTLDWTDRGTCV 155 (318)
T ss_pred CCCCCCCChHHHHHHHHhC---CCCCcEeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcCCCCeEE
Confidence 9988778988888777765 45578999999999999999999999999965 9999999999762 2233457
Q ss_pred ccCCceEEEEECCCCC-ceeeccccccccccccccccCCCCCcccccCCcc---hHHHHHHHHHHHHHHHHHHHHhhhcC
Q 023575 163 TGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKL---SQTCYLMALDSCYKYFCQKFEKLEGR 238 (280)
Q Consensus 163 ~fGDgAaA~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~L~~~ 238 (280)
+|||||+|+||++++. .++......+++...+.+..|.++.......+.+ ..+.+...+..+.+.+. +.|+++
T Consensus 156 ~~GDGAaA~lL~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~ 232 (318)
T TIGR00747 156 LFGDGAGAVVLGESEDPGGIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVE---ETLEAN 232 (318)
T ss_pred EEecceeEEEEeecCCCCcEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHH---HHHHHc
Confidence 8999999999998764 2344333344554444344444322100011100 12333334444444333 348999
Q ss_pred CCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 239 QFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 239 gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
|++++|||||++||+|.++++.+.+.|++. ++.+ ||+|+|++
T Consensus 233 g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~ 282 (318)
T TIGR00747 233 GLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIP 282 (318)
T ss_pred CCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHH
Confidence 999999999999999999999999999872 3445 99999874
No 20
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=5.8e-40 Score=300.68 Aligned_cols=262 Identities=19% Similarity=0.177 Sum_probs=187.5
Q ss_pred eEEeEEEEecCCccccHHHHHHhhCC--CC----------CeeeeccCceeeecCCC--CC-------------------
Q 023575 9 VGILALDIYFPPTCVLQEALEVHDGV--SK----------GKYTVGLGQDCMAFCSE--VE------------------- 55 (280)
Q Consensus 9 ~~I~~ig~~lP~~~v~~~~~~~~~g~--~~----------~~~~~~ig~r~~~~~~~--~e------------------- 55 (280)
++|.++++|+|++.++|+++.+.++. +. +++....|.++|++..+ ++
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 68999999999999999999987652 22 44555566666667654 32
Q ss_pred --CHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc-ccCchHHHHHHHHH
Q 023575 56 --DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCV 132 (280)
Q Consensus 56 --~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~-~~C~g~~~aL~~A~ 132 (280)
++.+|+++|+++||+++|++|+|||+||++|+++ +..|+.+.+|++.|++. +++.+||++ +||+|+++||++|.
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~--~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLR--PDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCC--cccchhccccccchhHHHHHHHHH
Confidence 5899999999999999999999999999999887 57999999988877542 258899998 79999999999999
Q ss_pred HHHHhcCCCCCeEEEEEeccccc--c--C-CC---CCcccCCceEEEEECCCCCce-eeccccccccccccccccCCCCC
Q 023575 133 NWVESASWDGRYGLVVCTDSAVY--A--E-GP---ARPTGGAAAVAMLIGPDAPIA-FESKLRGSHMSHAYDFYKPNLAS 203 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s~--~--~-~~---~~~~fGDgAaA~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 203 (280)
++++++.. ++||||++|.++. . + .. +..+|||||+|+||++++... +....+...+.... ..|..+.
T Consensus 159 ~~~~~~~~--~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~ 234 (361)
T cd00831 159 DLLEANPG--ARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAAST--LLPDSED 234 (361)
T ss_pred HHHHHCCC--CEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccce--eeecCCC
Confidence 99999954 9999999999873 2 2 11 357899999999999876421 11110011111000 0111110
Q ss_pred --cccccC-C---cchHHHHHHHHHHHHHHHHHHHHhhhcC--CCCccCccEEecCCCChHHHHHHHHHhhhh-------
Q 023575 204 --EYPVVD-G---KLSQTCYLMALDSCYKYFCQKFEKLEGR--QFSMLDVDYFVFHSPYNKLVQKSFARLFFN------- 268 (280)
Q Consensus 204 --~~~~~~-g---~~~~~~~~~~~~~~~~~~~~~~~~L~~~--gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------- 268 (280)
.+...+ + .+...++......+.+.+. ++|+++ |++++|||||++||+|.++++.+.++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~---~~L~~~~~g~~~~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s 311 (361)
T cd00831 235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLR---KLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEAS 311 (361)
T ss_pred ceEEEEEcceEEEEeChhHHHHHHHHHHHHHH---HHhccccCCCccccceEEEECCCChHHHHHHHHHcCCCHHHHHHH
Confidence 000001 1 0111222222233333333 348999 999999999999999999999999999862
Q ss_pred --hhhc--cCCCCCCC
Q 023575 269 --DFLR--NASLPSIC 280 (280)
Q Consensus 269 --~~~~--NtssasI~ 280 (280)
++.+ ||+|+|||
T Consensus 312 ~~~l~~~GN~~sasi~ 327 (361)
T cd00831 312 RMVLRRYGNMSSSSVL 327 (361)
T ss_pred HHHHHHhCCchhccHH
Confidence 2334 99999985
No 21
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=4e-39 Score=297.60 Aligned_cols=261 Identities=15% Similarity=0.132 Sum_probs=181.3
Q ss_pred eeEEeEEEEecCCccccHHHHHHhh-C--CCCC---------eeeeccCceeeecCCCC---------------------
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHD-G--VSKG---------KYTVGLGQDCMAFCSEV--------------------- 54 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~-g--~~~~---------~~~~~ig~r~~~~~~~~--------------------- 54 (280)
.++|.++|+|+|+++++|+++.+.+ . .+++ ||...+|+++||+..++
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 101 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL 101 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence 5789999999999999999998873 2 2233 35555555566676554
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHH
Q 023575 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 55 ----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~ 130 (280)
|++.+|+++|+++||+++|++++|||+||++|+|+++ .|++++++++.|++... ...++++.+||+||++||++
T Consensus 102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~-~~~~~~~~~gC~g~~~aL~~ 179 (399)
T PLN03171 102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPS-VRRTMLHLNGCFAGAAALRL 179 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcc-cceeeccCCccHHHHHHHHH
Confidence 4799999999999999999999999999999999986 89999998888865321 11256777899999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc--cc--CCCC------CcccCCceEEEEECCCCCc------eeecccccccccccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV--YA--EGPA------RPTGGAAAVAMLIGPDAPI------AFESKLRGSHMSHAY 194 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s--~~--~~~~------~~~fGDgAaA~ll~~~~~~------~~~~~~~~~~~~~~~ 194 (280)
|.++++++.+ ++||||++|.++ +. ++.. ..+|||||+|+||++++.. .+......+......
T Consensus 180 A~~li~~~~~--~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p~~~~ 257 (399)
T PLN03171 180 AKDLAENNRG--ARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESDD 257 (399)
T ss_pred HHHHHHhCCC--CeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEEecCCch
Confidence 9999999954 999999999987 22 2221 5799999999999986431 233221111111111
Q ss_pred cc-c-cCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhh-----cCCCCccCccEEecCCCChHHHHHHHHHhhh
Q 023575 195 DF-Y-KPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE-----GRQFSMLDVDYFVFHSPYNKLVQKSFARLFF 267 (280)
Q Consensus 195 ~~-~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~-----~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~ 267 (280)
.+ + .+.++ .++++........+...++.+.+ +.|+ ..|++.+||+|+ +||+|.+|++.+.++|++
T Consensus 258 ~~~~~~~~~g-----~~~~~~~~~vp~~i~~~l~~~l~--~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~Lgl 329 (399)
T PLN03171 258 AINMHFTEGG-----LDGNIGTRQVPGLIGDNIERCLL--DAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAALGL 329 (399)
T ss_pred heEEEEEcCC-----ceEEECchhHHHHHHHHHHHHHH--HHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHcCC
Confidence 11 0 11111 11222212222233222222211 0122 258889999987 599999999999999987
Q ss_pred h---------hhhc--cCCCCCCC
Q 023575 268 N---------DFLR--NASLPSIC 280 (280)
Q Consensus 268 ~---------~~~~--NtssasI~ 280 (280)
. ++.+ ||||+|||
T Consensus 330 ~~ek~~~s~~~l~~yGNtssaSip 353 (399)
T PLN03171 330 EPEKLAASRRVLSDYGNMFGATVI 353 (399)
T ss_pred CHHHhHHHHHHHHHhCcchhhhHH
Confidence 2 2444 99999986
No 22
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.3e-38 Score=286.90 Aligned_cols=264 Identities=21% Similarity=0.217 Sum_probs=203.5
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 6 ~~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
++.++|.++++|+|+++++++++.+..+.+++++....|.++|+++.++++..+|+.+|++++|+++|+++++||.||++
T Consensus 1 ~~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~ 80 (319)
T PRK09352 1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVA 80 (319)
T ss_pred CCceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 36799999999999999999999999887666666566776777888899999999999999999999999999999999
Q ss_pred cccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc----cCCCCC
Q 023575 86 SETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY----AEGPAR 161 (280)
Q Consensus 86 t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~~~~ 161 (280)
|+++++..|+.+.+++..++ ..++++++++++|++++.||..|.++|++|.+ +++||+++|.++. .++...
T Consensus 81 ~~~~~~~~~~~~~~i~~~lG---~~~~~~~~v~~~Casg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~ 155 (319)
T PRK09352 81 TTTPDYAFPSTACLVQARLG---AKNAAAFDLSAACSGFVYALSTADQFIRSGAY--KNVLVIGAEKLSRIVDWTDRSTC 155 (319)
T ss_pred cCCCCCCCchHHHHHHHHhC---CCCCcEeeccccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCce
Confidence 99888778888887766665 45578899999999999999999999999965 9999999999762 123345
Q ss_pred cccCCceEEEEECCCCCceeeccccccccccccccccCCCCCcccc------cCCcchHHHHHHHHHHHHHHHHHHHHhh
Q 023575 162 PTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPV------VDGKLSQTCYLMALDSCYKYFCQKFEKL 235 (280)
Q Consensus 162 ~~fGDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~L 235 (280)
.+|||||+|+||++++..++......++++..+.+..|.++...+. .+++ ..+...+..+.+.+. ++|
T Consensus 156 ~~~gDGaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~---~~l 229 (319)
T PRK09352 156 VLFGDGAGAVVLGASEEPGILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGR---EVFKFAVRELAKVAR---EAL 229 (319)
T ss_pred EEEeccceEEEEEEcCCCCeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCH---HHHHHHHHHHHHHHH---HHH
Confidence 6899999999999876434443334455554433344544322221 1221 223223333333332 348
Q ss_pred hcCCCCccCccEEecCCCChHHHHHHHHHhhhh------hhhc--cCCCCCCC
Q 023575 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------DFLR--NASLPSIC 280 (280)
Q Consensus 236 ~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------~~~~--NtssasI~ 280 (280)
+++|++++|||||++||+|.++++.+.+.|++. ++.+ |++|++++
T Consensus 230 ~~~g~~~~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~ 282 (319)
T PRK09352 230 EAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIP 282 (319)
T ss_pred HHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHH
Confidence 999999999999999999999999999999872 3444 99998863
No 23
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=4.7e-38 Score=289.40 Aligned_cols=264 Identities=14% Similarity=0.158 Sum_probs=181.0
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhC-C-----CC--C-ee---e--eccCceeeecCC------C--------------
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDG-V-----SK--G-KY---T--VGLGQDCMAFCS------E-------------- 53 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g-~-----~~--~-~~---~--~~ig~r~~~~~~------~-------------- 53 (280)
...|.++|+..|++.++++++.+.+. . .+ + ++ . ++|..|+..+.. +
T Consensus 15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~ 94 (389)
T PLN03168 15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRH 94 (389)
T ss_pred CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHH
Confidence 47899999999999999999987642 1 11 1 12 2 577766654421 0
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHH
Q 023575 54 ---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 54 ---~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~ 130 (280)
.+.+.+|+++|+++||+++|++++|||+||++|+||. ..|+++++|++.|++.+. -..++|++.||+||++||++
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~-~~r~~d~~~gC~g~~~aL~~ 172 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGLKPT-VKRVMMYQTGCFGGASVLRV 172 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCcCCc-ceeeeeeCCccHHHHHHHHH
Confidence 0137899999999999999999999999999999996 589999998888865321 12489999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc--ccCC--------CCCcccCCceEEEEECCCCCceeeccccccccccccccccC-
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV--YAEG--------PARPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKP- 199 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s--~~~~--------~~~~~fGDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~- 199 (280)
|.++++++++ ++||||++|.+| +.+. .+..+|||||+|+||++++........+...... ....|
T Consensus 173 A~~~i~~~~~--~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~--~~~~p~ 248 (389)
T PLN03168 173 AKDLAENNKG--ARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAG--ETILPE 248 (389)
T ss_pred HHHHHHhCCC--CEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeee--eEEEcC
Confidence 9999999954 999999999987 3221 2468999999999999864321100001111000 00122
Q ss_pred CCCC-cccccC-Cc-c--hHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh------
Q 023575 200 NLAS-EYPVVD-GK-L--SQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN------ 268 (280)
Q Consensus 200 ~~~~-~~~~~~-g~-~--~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~------ 268 (280)
..+. .+...+ |. + ...++. .+...++.+.+ +.|++.|+...|+++|++||+|.+|++.+.++|++.
T Consensus 249 s~~~~~~~~~~~g~~~~l~~~vp~-~i~~~~~~~l~--~~l~~~~~~~~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~ 325 (389)
T PLN03168 249 SDGAIDGHLTEAGLIFHLMKDVPG-LISKNIEKFLN--EARKCVGSPDWNEMFWAVHPGGPAILDQVEAKLKLTKDKMQG 325 (389)
T ss_pred CCCccCceEecCceEEEECHHHHH-HHHHHHHHHHH--HHHHhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence 1110 111111 11 1 122222 22222222211 347888888788999999999999999999999872
Q ss_pred ---hhhc--cCCCCCCC
Q 023575 269 ---DFLR--NASLPSIC 280 (280)
Q Consensus 269 ---~~~~--NtssasI~ 280 (280)
.+.+ ||||||||
T Consensus 326 s~~vl~~yGNtSSaSv~ 342 (389)
T PLN03168 326 SRDILSEFGNMSSASVL 342 (389)
T ss_pred HHHHHHHhCccHhhhHH
Confidence 2334 99999986
No 24
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.9e-37 Score=285.14 Aligned_cols=258 Identities=16% Similarity=0.085 Sum_probs=186.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhC------------------------CCCCeeeeccCceeeecCCC----------
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDG------------------------VSKGKYTVGLGQDCMAFCSE---------- 53 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g------------------------~~~~~~~~~ig~r~~~~~~~---------- 53 (280)
+++|.++|+|+|+++++|+++.+.++ .+.+|+...+|.++|++..+
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR 81 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence 67899999999999999999987632 12345554445555555432
Q ss_pred --------CC--CHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCch
Q 023575 54 --------VE--DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYG 123 (280)
Q Consensus 54 --------~e--~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g 123 (280)
.+ +..+|+.+|+++||+++|+++++||.||++|+++++..|+.+..+++.|+ .+ .+++|++.+|+|
T Consensus 82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lg---l~-~~~~~v~~aCas 157 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALG---IE-GFAFDMNVACSS 157 (372)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcC---CC-CcEEEecchhHH
Confidence 11 34689999999999999999999999999998888888999988777765 33 568999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEecccc-c---cCCCCCcccCCceEEEEECCCCCc------eeeccccccccccc
Q 023575 124 GTAALFNCVNWVESASWDGRYGLVVCTDSAV-Y---AEGPARPTGGAAAVAMLIGPDAPI------AFESKLRGSHMSHA 193 (280)
Q Consensus 124 ~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-~---~~~~~~~~fGDgAaA~ll~~~~~~------~~~~~~~~~~~~~~ 193 (280)
++.||..|.++|++|.+ ++||||++|.++ + .++.+..+|||||+|+||++.+.. .++.....+...
T Consensus 158 g~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~-- 233 (372)
T PRK07515 158 ATFGIQTAANAIRSGSA--RRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFS-- 233 (372)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeecccc--
Confidence 99999999999999965 999999999986 2 233467899999999999986421 233322122111
Q ss_pred cccccCCCCCccc-------------ccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHH
Q 023575 194 YDFYKPNLASEYP-------------VVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (280)
Q Consensus 194 ~~~~~~~~~~~~~-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~ 260 (280)
..+..+. |...+ .++| ...+.+.+..+.+.+. ++|+++|++++|||+|++||+|.++++.
T Consensus 234 ~~~~~~~-G~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~i~---~~L~~~gl~~~dId~~~~Hq~~~~~~d~ 306 (372)
T PRK07515 234 NNIRNNF-GFLNRADPEGIGARDKLFVQEG---RKVFKEVCPMVAEHIV---EHLAENGLTPADVKRFWLHQANINMNQL 306 (372)
T ss_pred cceecCC-CCCCCCCccccccccceEEecc---HHHHHHHHHHHHHHHH---HHHHHcCCCHHHCCEEEECCCCHHHHHH
Confidence 1111111 10000 0122 1334444444555554 4599999999999999999999999999
Q ss_pred HHHHh-hh--------hhhhc--cCCCCCCC
Q 023575 261 SFARL-FF--------NDFLR--NASLPSIC 280 (280)
Q Consensus 261 ~~~~l-~~--------~~~~~--NtssasI~ 280 (280)
+.+++ ++ ..+.+ ||+|||||
T Consensus 307 ~~~~llg~~~~~~~~~~~~~~~GNt~sasi~ 337 (372)
T PRK07515 307 IGKKVLGRDATPEEAPVILDEYANTSSAGSI 337 (372)
T ss_pred HHHHhccCCCChhhceEeHHhcCCchhhHHH
Confidence 99884 53 12344 99999985
No 25
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=284.32 Aligned_cols=260 Identities=15% Similarity=0.176 Sum_probs=182.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhC-------CCC-Ce----ee--eccCceeeecCC------CC-------------
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDG-------VSK-GK----YT--VGLGQDCMAFCS------EV------------- 54 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g-------~~~-~~----~~--~~ig~r~~~~~~------~~------------- 54 (280)
...|.++|++.|++.++|+++.+.+. .+. ++ +. +||..|+..+.. +.
T Consensus 16 ~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (393)
T PLN03172 16 PATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQ 95 (393)
T ss_pred CeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHH
Confidence 47899999999999999999987642 111 11 22 577766653311 00
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeee-eeccccCchHHHHHH
Q 023575 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG-VDSTNACYGGTAALF 129 (280)
Q Consensus 55 ----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~-~dv~~~C~g~~~aL~ 129 (280)
+.+.+|+++|+++||+++|++++|||+||++|+|+.. .|+.+++|++.|++. +.+.+ +|++.||+||++||+
T Consensus 96 ~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl~--~~~~~~~~~~~gC~g~~~aL~ 172 (393)
T PLN03172 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLK--PSVKRFMMYQQGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCCC--CCceEEeeeCCchHHHHHHHH
Confidence 1256999999999999999999999999999999864 899999988888653 23434 688999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEecccc--cc---CC-----CCCcccCCceEEEEECCCCCc-------eeecccc--cccc
Q 023575 130 NCVNWVESASWDGRYGLVVCTDSAV--YA---EG-----PARPTGGAAAVAMLIGPDAPI-------AFESKLR--GSHM 190 (280)
Q Consensus 130 ~A~~~l~~g~~~~~~vLvv~~e~~s--~~---~~-----~~~~~fGDgAaA~ll~~~~~~-------~~~~~~~--~~~~ 190 (280)
+|.++++++. .++||||++|.++ +. ++ .+..+|||||+|+||++++.. .+..... ..++
T Consensus 173 ~A~~~~~~~~--~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t 250 (393)
T PLN03172 173 LAKDLAENNA--GSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDS 250 (393)
T ss_pred HHHHHHHcCC--CCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCC
Confidence 9999999995 4999999999988 32 21 136899999999999986432 2222100 0111
Q ss_pred ccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh--
Q 023575 191 SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN-- 268 (280)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~-- 268 (280)
++...+.....|..+ .++.+++......+.+.+. +.|+++|++..|||+|++||+|.+|++.+.++|++.
T Consensus 251 ~~~~~~~i~~~G~~~-----~l~~~vp~~~~~~i~~~~~---~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~ 322 (393)
T PLN03172 251 DGAIDGHLREVGLTF-----HLLKDVPGLISKNIEKSLV---EAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEE 322 (393)
T ss_pred cccccceEEcCCcEE-----EEechHHHHHHHHHHHHHH---HHhhhcCCCccccceEEecCCcHHHHHHHHHHcCCCHH
Confidence 111111000011000 1123444443333444443 348999999999999999999999999999999872
Q ss_pred ------h-hhc--cCCCCCCC
Q 023575 269 ------D-FLR--NASLPSIC 280 (280)
Q Consensus 269 ------~-~~~--NtssasI~ 280 (280)
. +.+ ||||+||+
T Consensus 323 ~~~~s~~vl~~yGNtSSaSv~ 343 (393)
T PLN03172 323 KLRATRHVLSDYGNMSSACVL 343 (393)
T ss_pred HHHHHHHHHHHhCccHHhHHH
Confidence 1 334 99999985
No 26
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=3e-37 Score=283.91 Aligned_cols=259 Identities=16% Similarity=0.190 Sum_probs=182.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhC------CCC--Ce-e---e--eccCceeeecCCC----C---------------
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDG------VSK--GK-Y---T--VGLGQDCMAFCSE----V--------------- 54 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g------~~~--~~-~---~--~~ig~r~~~~~~~----~--------------- 54 (280)
...|.++|+..|++.++++++.+.+. ..+ ++ + . +||..|+..++.+ .
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ 95 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence 47899999999999999999987641 111 11 2 1 5777665533210 0
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCe-eeeeccccCchHHHHHH
Q 023575 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (280)
Q Consensus 55 ----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~-~~~dv~~~C~g~~~aL~ 129 (280)
+.+.+|+++|+++||+++|++++|||+||++|+|+.. .|+.+.+|++.|++.+ .+ .++|++.||+||++||+
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl~~--~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLRS--SVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCCCc--cceeeehhcCccHHHHHHHH
Confidence 1257999999999999999999999999999999974 7999999888886532 23 35788999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEecccc--cc---CC-----CCCcccCCceEEEEECCCCCcee-------eccc--ccccc
Q 023575 130 NCVNWVESASWDGRYGLVVCTDSAV--YA---EG-----PARPTGGAAAVAMLIGPDAPIAF-------ESKL--RGSHM 190 (280)
Q Consensus 130 ~A~~~l~~g~~~~~~vLvv~~e~~s--~~---~~-----~~~~~fGDgAaA~ll~~~~~~~~-------~~~~--~~~~~ 190 (280)
+|.+++++++ .++||||++|.++ +. ++ .+..+|||||+|+||++++..++ .... +...+
T Consensus 173 ~A~~~~~~~~--~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t 250 (391)
T PLN03173 173 LAKDLAENNK--GARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDS 250 (391)
T ss_pred HHHHHHHhCC--CCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCC
Confidence 9999999994 4999999999987 32 21 23689999999999997543222 1100 00111
Q ss_pred cccccc-ccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh-
Q 023575 191 SHAYDF-YKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN- 268 (280)
Q Consensus 191 ~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~- 268 (280)
++...+ .... |..+ .+..+++......+.+.+. +.|+++|++.+|||+|++||+|.+|++.+.++|++.
T Consensus 251 ~~~~~~~i~~~-G~~~-----~l~~~vp~~~~~~~~~~i~---~~L~~~gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ 321 (391)
T PLN03173 251 DGAIDGHLREV-GLTF-----HLLKDVPGLISKNVEKSLT---EAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLALKP 321 (391)
T ss_pred ccceeeEEEcC-ceEE-----EEecHHHHHHHHHHHHHHH---HHHHhcCCCccccCeEEECCCcHHHHHHHHHHcCCCh
Confidence 111110 0111 1000 1122444444334444443 348999999999999999999999999999999872
Q ss_pred --------hhhc--cCCCCCCC
Q 023575 269 --------DFLR--NASLPSIC 280 (280)
Q Consensus 269 --------~~~~--NtssasI~ 280 (280)
++.+ ||||||||
T Consensus 322 ekl~~s~~vl~~yGNtSSaSv~ 343 (391)
T PLN03173 322 EKLRATRHVLSEYGNMSSACVL 343 (391)
T ss_pred HHHHHHHHHHHHhCcchhhHHH
Confidence 2444 99999985
No 27
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=1.5e-36 Score=280.24 Aligned_cols=261 Identities=14% Similarity=0.170 Sum_probs=182.7
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhC-------CCC-Ce-e---e--eccCceeeecCC------CC-------------
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDG-------VSK-GK-Y---T--VGLGQDCMAFCS------EV------------- 54 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g-------~~~-~~-~---~--~~ig~r~~~~~~------~~------------- 54 (280)
...|.++|+..|++.++++++.+.+. .+. ++ + . +||..|+..+.+ +.
T Consensus 20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 99 (401)
T PLN03170 20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQ 99 (401)
T ss_pred CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHH
Confidence 37899999999999999999987642 111 11 2 1 577766653321 00
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCe-eeeeccccCchHHHHHH
Q 023575 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (280)
Q Consensus 55 ----e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~-~~~dv~~~C~g~~~aL~ 129 (280)
+.+.+|+++|+++||+++|++++|||+||++|+|+.. .|+.+++|++.|++.+ .+ .++|++.||+||++||+
T Consensus 100 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl~~--~~~r~~d~~~gC~G~~~aL~ 176 (401)
T PLN03170 100 DIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGLRP--SVNRLMMYQQGCFAGGTVLR 176 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCcCc--ccHHHHhhcChhHHHHHHHH
Confidence 1257899999999999999999999999999999964 8999999888886532 22 37999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEecccc--ccC-C-------CCCcccCCceEEEEECCCCCceeecc--ccccccccccccc
Q 023575 130 NCVNWVESASWDGRYGLVVCTDSAV--YAE-G-------PARPTGGAAAVAMLIGPDAPIAFESK--LRGSHMSHAYDFY 197 (280)
Q Consensus 130 ~A~~~l~~g~~~~~~vLvv~~e~~s--~~~-~-------~~~~~fGDgAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~ 197 (280)
+|.++++++. .++||||++|.++ +.+ . .+..+|||||+|+||++++..++... .+.+... ..
T Consensus 177 ~A~~l~~~~~--~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~----~~ 250 (401)
T PLN03170 177 VAKDLAENNR--GARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQ----TI 250 (401)
T ss_pred HHHHHHHcCC--CCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccc----eE
Confidence 9999999994 4999999999987 321 1 13579999999999998653221110 0111111 11
Q ss_pred cCCC-C-Cccccc-CCc---chHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh---
Q 023575 198 KPNL-A-SEYPVV-DGK---LSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN--- 268 (280)
Q Consensus 198 ~~~~-~-~~~~~~-~g~---~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~--- 268 (280)
.|.. + ..+... .|. +..+++......+.+.+. +.|+++|++.+|||+|++||+|.+|++.+.++|++.
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~---~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~~ 327 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLE---EAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKER 327 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHH---HHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChHH
Confidence 2211 0 001111 121 112333333333333332 348999999999999999999999999999999872
Q ss_pred -----h-hhc--cCCCCCCC
Q 023575 269 -----D-FLR--NASLPSIC 280 (280)
Q Consensus 269 -----~-~~~--NtssasI~ 280 (280)
. +.+ ||||+||+
T Consensus 328 ~~~s~~~l~~~GNtsSasv~ 347 (401)
T PLN03170 328 MRATRHVLSEYGNMSSACVL 347 (401)
T ss_pred HHHHHHHHHHhCccHHhHHH
Confidence 2 333 99999985
No 28
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=5.1e-36 Score=270.43 Aligned_cols=260 Identities=33% Similarity=0.413 Sum_probs=193.9
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
.++|.++++|+|+++++|+++.+.++.+ ++...+|.++|++..++++..+|+.+|++++|+++|+++++||.||++++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~--~~~~~~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCC--cceeeeecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 3689999999999999999999988764 55544555566677778999999999999999999999999999999998
Q ss_pred cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccccc---CCCCCccc
Q 023575 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYA---EGPARPTG 164 (280)
Q Consensus 88 t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~---~~~~~~~f 164 (280)
+++...|+.+.++++.++ .+++++++++++|++++.||.+|.+++++|.+ +++|||++|.++.. ......+|
T Consensus 79 ~~~~~~~~~~~~i~~~lg---~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlvv~~e~~~~~~~~~~~~~~~~ 153 (324)
T cd00827 79 SPIDKGKSAATYLAELLG---LTNAEAFDLKQACYGGTAALQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTL 153 (324)
T ss_pred CCCCCCccHHHHHHHHcC---CCCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEEHHhhhcccCCCCccccc
Confidence 888777888888776665 44688999999999999999999999999965 99999999998732 23567899
Q ss_pred CCceEEEEECCCCC---ceeeccccccccccccccccCC--CCCccc---------ccCCcchHHHHHHHHHHHHHHHHH
Q 023575 165 GAAAVAMLIGPDAP---IAFESKLRGSHMSHAYDFYKPN--LASEYP---------VVDGKLSQTCYLMALDSCYKYFCQ 230 (280)
Q Consensus 165 GDgAaA~ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------~~~g~~~~~~~~~~~~~~~~~~~~ 230 (280)
||||+|+||++++. .+++.....+++.... .+.+. ++...+ ..++. ...++......+.+.+.
T Consensus 154 gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~- 230 (324)
T cd00827 154 GDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDF-SPYPVMDGGYPKPCKLAYAIRLTAEPA-GRAVFEAAHKLIAKVVR- 230 (324)
T ss_pred cCceEEEEEecCcccccCCceeeeeeccccccc-CccceeccCCCcchhhhhhcceeecCC-ccchHHHHhHHHHHHHH-
Confidence 99999999998765 3555444344443211 00000 000000 01110 00122222223333332
Q ss_pred HHHhhhcCCCCccCccEEecCCCCh-HHHHHHHHHhhh------h----hhhc--cCCCCCCC
Q 023575 231 KFEKLEGRQFSMLDVDYFVFHSPYN-KLVQKSFARLFF------N----DFLR--NASLPSIC 280 (280)
Q Consensus 231 ~~~~L~~~gl~~~dId~~v~Hq~n~-~~~~~~~~~l~~------~----~~~~--NtssasI~ 280 (280)
+.|++.|++ +|||+|+|||+|. ++++.+.+++++ . ++.+ ||+|+|++
T Consensus 231 --~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~ 290 (324)
T cd00827 231 --KALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASIL 290 (324)
T ss_pred --HHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHH
Confidence 348999999 9999999999999 999999999985 1 3555 99999874
No 29
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.7e-35 Score=275.66 Aligned_cols=268 Identities=18% Similarity=0.231 Sum_probs=188.9
Q ss_pred CCCceeEEeEEEEecCC--ccccHHHHHHhh---C-CCCC------eee--eccCceeeecCC------C-------CCC
Q 023575 4 WHPKNVGILALDIYFPP--TCVLQEALEVHD---G-VSKG------KYT--VGLGQDCMAFCS------E-------VED 56 (280)
Q Consensus 4 ~~~~~~~I~~ig~~lP~--~~v~~~~~~~~~---g-~~~~------~~~--~~ig~r~~~~~~------~-------~e~ 56 (280)
.+.+.++++..++|.|+ ++++.+.+.++. | .+++ ++. +|+|.. .+++. + .|.
T Consensus 93 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~-t~~p~~~~~~~~~~~~~~~~~e 171 (502)
T PLN02377 93 TRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGED-TYVPEAMHYIPPRPSMAAAREE 171 (502)
T ss_pred cCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCc-cccCchhccCCccchHHHHHHH
Confidence 35678999999999988 689999888763 3 2332 121 688873 34441 1 245
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc-ccCchHHHHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~-~~C~g~~~aL~~A~~~l 135 (280)
+.+++..|+++||+++|++|+|||+||+ |+|+++..|+.++.|++.+++. +++.+||++ .||+||+.||++|++++
T Consensus 172 a~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr--~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 172 AEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLR--GNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCC--CCCeEEecccchhhHHHHHHHHHHHHH
Confidence 7899999999999999999999999987 7999989999999988888653 368899999 59999999999999999
Q ss_pred HhcCCCCCeEEEEEeccccc----cCCCC----CcccCCceEEEEECCCCC-c--------eeecccccccccccccccc
Q 023575 136 ESASWDGRYGLVVCTDSAVY----AEGPA----RPTGGAAAVAMLIGPDAP-I--------AFESKLRGSHMSHAYDFYK 198 (280)
Q Consensus 136 ~~g~~~~~~vLvv~~e~~s~----~~~~~----~~~fGDgAaA~ll~~~~~-~--------~~~~~~~~~~~~~~~~~~~ 198 (280)
++++ .++||||++|.++. .++.+ ..+|||||+|+||++.+. . .+..+..+++++.+...+.
T Consensus 249 ~~~~--~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~ 326 (502)
T PLN02377 249 QVHR--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQ 326 (502)
T ss_pred HcCC--CCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeee
Confidence 9995 49999999999872 23333 589999999999997421 1 2344434455544433333
Q ss_pred C---CCCCcccc------cCCcc---------------hHHHHHHHHHHHHHHHHHHHHhhhcCC-CCccCccEEecCCC
Q 023575 199 P---NLASEYPV------VDGKL---------------SQTCYLMALDSCYKYFCQKFEKLEGRQ-FSMLDVDYFVFHSP 253 (280)
Q Consensus 199 ~---~~~~~~~~------~~g~~---------------~~~~~~~~~~~~~~~~~~~~~~L~~~g-l~~~dId~~v~Hq~ 253 (280)
+ .++.+.+. ..|+- +.+.+..+.....+.+. +.++..+ ...+|||+|++||+
T Consensus 327 ~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~---~~l~~~~p~~~~didhf~iHqg 403 (502)
T PLN02377 327 EQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFN---KKMKPYIPDFKLAFDHFCIHAG 403 (502)
T ss_pred ccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH---HHHhhccCCcHhhcCEEEECCC
Confidence 3 22222111 11110 00111122222233332 2244443 45689999999999
Q ss_pred ChHHHHHHHHHhhhh---------hhhc--cCCCCCCC
Q 023575 254 YNKLVQKSFARLFFN---------DFLR--NASLPSIC 280 (280)
Q Consensus 254 n~~~~~~~~~~l~~~---------~~~~--NtssasI~ 280 (280)
|+++++.+.++|++. ++.+ ||||+||+
T Consensus 404 gr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~ 441 (502)
T PLN02377 404 GRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIW 441 (502)
T ss_pred CHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHH
Confidence 999999999999974 2344 99999985
No 30
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=8.6e-35 Score=270.81 Aligned_cols=267 Identities=20% Similarity=0.254 Sum_probs=185.6
Q ss_pred CCCceeEEeEEEEecCC--ccccHHHHHHhh------C-CCCC---------eee--eccCceeeecCCC----------
Q 023575 4 WHPKNVGILALDIYFPP--TCVLQEALEVHD------G-VSKG---------KYT--VGLGQDCMAFCSE---------- 53 (280)
Q Consensus 4 ~~~~~~~I~~ig~~lP~--~~v~~~~~~~~~------g-~~~~---------~~~--~~ig~r~~~~~~~---------- 53 (280)
.+.+.++++..++|.|+ ++++.+.+.++. | .+++ |+. +|||.|+ +++..
T Consensus 63 ~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t-~~p~~~~~~~~~~~~ 141 (478)
T PLN02932 63 TRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQET-YIPEGLQCLPLQQNL 141 (478)
T ss_pred cCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCce-eeccccccCCHHHHH
Confidence 45678999999999988 689999888753 2 2222 222 6898875 34322
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc-ccCchHHHHHH
Q 023575 54 ---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALF 129 (280)
Q Consensus 54 ---~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~-~~C~g~~~aL~ 129 (280)
.+.+.+|+.+|+++||+++|++|+|||+||++|+++. ..|+.++.|++.+++. +++.+||++ .||+||++||+
T Consensus 142 ~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr--~~i~~fdL~gmGCSggl~aL~ 218 (478)
T PLN02932 142 AVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLR--DNIKSLNLGGMGCSAGVIAID 218 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCC--CCceEEEeccchhhhHHHHHH
Confidence 1248899999999999999999999999999999997 8999999988888653 368899999 79999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEeccccc----cCC----CCCcccCCceEEEEECCCCC------ceee---cccccccccc
Q 023575 130 NCVNWVESASWDGRYGLVVCTDSAVY----AEG----PARPTGGAAAVAMLIGPDAP------IAFE---SKLRGSHMSH 192 (280)
Q Consensus 130 ~A~~~l~~g~~~~~~vLvv~~e~~s~----~~~----~~~~~fGDgAaA~ll~~~~~------~~~~---~~~~~~~~~~ 192 (280)
+|++++++++ .++||||++|.++. .++ .+..+|||||+|+||++.+. ..+. .+..+++++.
T Consensus 219 lA~~ll~~~~--~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~ 296 (478)
T PLN02932 219 AAKSLLQVHR--NTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRS 296 (478)
T ss_pred HHHHHHHcCC--CCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCc
Confidence 9999999995 49999999999872 222 35789999999999998541 1244 2333444444
Q ss_pred ccccccCCC--CC-c------cccc-----------CCcch---HHHHHHHHHHHHHHHHHHHHhhhcCCCCc---cCcc
Q 023575 193 AYDFYKPNL--AS-E------YPVV-----------DGKLS---QTCYLMALDSCYKYFCQKFEKLEGRQFSM---LDVD 246 (280)
Q Consensus 193 ~~~~~~~~~--~~-~------~~~~-----------~g~~~---~~~~~~~~~~~~~~~~~~~~~L~~~gl~~---~dId 246 (280)
+.....+.. |. + .|.. .|... .+.+.+.+....+.+.+ ....++.+ ++||
T Consensus 297 ~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k----~~~~~~~~~~~~~id 372 (478)
T PLN02932 297 YECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFN----PKLKHYIPDFKLAFE 372 (478)
T ss_pred cccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHH----HHhhcCcHhHHhhhc
Confidence 433333321 10 1 0100 00000 01122222222222211 01123333 5899
Q ss_pred EEecCCCChHHHHHHHHHhhhhh---------hhc--cCCCCCCC
Q 023575 247 YFVFHSPYNKLVQKSFARLFFND---------FLR--NASLPSIC 280 (280)
Q Consensus 247 ~~v~Hq~n~~~~~~~~~~l~~~~---------~~~--NtssasI~ 280 (280)
||++||+|+++++.+.++|++.+ +.+ ||||+||+
T Consensus 373 ~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~ 417 (478)
T PLN02932 373 HFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIW 417 (478)
T ss_pred eEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHH
Confidence 99999999999999999999843 444 99999985
No 31
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.7e-35 Score=272.63 Aligned_cols=267 Identities=16% Similarity=0.211 Sum_probs=190.5
Q ss_pred CCCceeEEeEEEEecCC--ccccHHHHHHhh---C-CCCCe------e--eeccCceeeecCC------C-------CCC
Q 023575 4 WHPKNVGILALDIYFPP--TCVLQEALEVHD---G-VSKGK------Y--TVGLGQDCMAFCS------E-------VED 56 (280)
Q Consensus 4 ~~~~~~~I~~ig~~lP~--~~v~~~~~~~~~---g-~~~~~------~--~~~ig~r~~~~~~------~-------~e~ 56 (280)
.+.+.++++..++|.|+ ++++.+.+.++. | .+++. + ++|+|..+ +++. + .+.
T Consensus 109 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~t-y~P~~~~~~~~~~~~~~~r~e 187 (521)
T PLN02854 109 KRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDET-YLPRGITSRPPNLCMEEARAE 187 (521)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcc-ccCccccCCCCcchHHHHHHH
Confidence 35667999999999988 689999888763 3 23331 2 17888765 3332 1 234
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc-ccCchHHHHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~-~~C~g~~~aL~~A~~~l 135 (280)
+......|++++|+++|++|+|||+||++ ||+++..|+++++|++.+++. .++.+||++ .||+||++||++|++++
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr--~~i~afdLsgmGCSggl~aL~lA~~lL 264 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLR--TDIKSYNLGGMGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCC--CCceEEecccchhhhHHHHHHHHHHHH
Confidence 67888899999999999999999999985 789989999999988888653 278899998 79999999999999999
Q ss_pred HhcCCCCCeEEEEEecccc--c---cCCCC---CcccCCceEEEEECCCC-Cce--------eecccccccccccccccc
Q 023575 136 ESASWDGRYGLVVCTDSAV--Y---AEGPA---RPTGGAAAVAMLIGPDA-PIA--------FESKLRGSHMSHAYDFYK 198 (280)
Q Consensus 136 ~~g~~~~~~vLvv~~e~~s--~---~~~~~---~~~fGDgAaA~ll~~~~-~~~--------~~~~~~~~~~~~~~~~~~ 198 (280)
++++. ++||||++|.++ + +++.+ ..+|||||+|+||++.+ +.+ +..+.++++++.+..++.
T Consensus 265 ~~~~~--~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~ 342 (521)
T PLN02854 265 KANPN--SYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQ 342 (521)
T ss_pred HhCCC--CeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEe
Confidence 99954 999999999987 2 33444 68999999999999753 111 333444555554444444
Q ss_pred CCC--CC-ccc------cc-----------CCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc------cCccEEecCC
Q 023575 199 PNL--AS-EYP------VV-----------DGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM------LDVDYFVFHS 252 (280)
Q Consensus 199 ~~~--~~-~~~------~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~------~dId~~v~Hq 252 (280)
+.+ |. +.+ .. .|....+ +.....-+...+. +.|.++|+++ +|||||++||
T Consensus 343 ~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~-~se~~~f~~~~i~---~~L~~~gl~~~~pd~~~didhf~iHq 418 (521)
T PLN02854 343 REDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLP-LSEQFMFFVTLVR---RKLLKAKVKPYIPDFKLAFEHFCIHA 418 (521)
T ss_pred ccCCCCcccccccccccchhhhhhhhhhhhccccccc-hHHHHHHHHHHHH---HHHHHcCCCccCCcccccCcEEEECC
Confidence 421 21 101 00 0110000 0111111222232 3478889987 6999999999
Q ss_pred CChHHHHHHHHHhhhh---------hhhc--cCCCCCCC
Q 023575 253 PYNKLVQKSFARLFFN---------DFLR--NASLPSIC 280 (280)
Q Consensus 253 ~n~~~~~~~~~~l~~~---------~~~~--NtssasI~ 280 (280)
+|+++++.+.++|++. ++.+ ||||+|||
T Consensus 419 ggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~ 457 (521)
T PLN02854 419 GGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLW 457 (521)
T ss_pred CCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHH
Confidence 9999999999999984 2344 99999985
No 32
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=245.86 Aligned_cols=268 Identities=68% Similarity=1.144 Sum_probs=247.6
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEE
Q 023575 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (280)
Q Consensus 5 ~~~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (280)
.+.+++|.++-+|+|...|+++|++.+-|.+..++..|+|+.++.++.+.|+...|+..+.++++++-.|+++.|+.|-+
T Consensus 8 ~p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEV 87 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEV 87 (462)
T ss_pred CccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEEe
Confidence 34589999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCCCCCccc
Q 023575 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTG 164 (280)
Q Consensus 85 ~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~~~~~~f 164 (280)
+|.|-.+-..+.-..|.++++..|.+++..+|..++|.|+..||..|.+|+++..++++.+||||+|..-|..++...+-
T Consensus 88 GTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G~aRpTG 167 (462)
T KOG1393|consen 88 GTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKGNARPTG 167 (462)
T ss_pred cceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEecCCCCCCCC
Confidence 99998888899999999999998988999999999999999999999999999998899999999999999988889999
Q ss_pred CCceEEEEECCCCCceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHh--hhcCCCCc
Q 023575 165 GAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEK--LEGRQFSM 242 (280)
Q Consensus 165 GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--L~~~gl~~ 242 (280)
|.||.|+||+++.+..|.....++|+++.++|+.|...+++|++||+++++.|..++..+...+.+++.. .+.-+..+
T Consensus 168 GAgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l 247 (462)
T KOG1393|consen 168 GAGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNL 247 (462)
T ss_pred CcceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Confidence 9999999999998888888788999999999999998899999999999999999999999888766422 33345567
Q ss_pred cCccEEecCCCChHHHHHHHHHhhhhhhhc
Q 023575 243 LDVDYFVFHSPYNKLVQKSFARLFFNDFLR 272 (280)
Q Consensus 243 ~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~ 272 (280)
++.|++|+|.|.-|++++-..+|.+++.+.
T Consensus 248 ~~fdy~ifHsP~cKlvqKs~arl~ynDf~~ 277 (462)
T KOG1393|consen 248 NSFDYIIFHSPYCKLVQKSLARLLYNDFLL 277 (462)
T ss_pred ccCCeEEEeCchhhhHHHHHHHhhhhhhhh
Confidence 899999999999999999999999988776
No 33
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-33 Score=240.79 Aligned_cols=257 Identities=18% Similarity=0.205 Sum_probs=182.3
Q ss_pred eEEeEEEEecCCccccHHHHHHhh----CCCC-Cee----e--eccCceeeecCCC---------------CCCHHHHHH
Q 023575 9 VGILALDIYFPPTCVLQEALEVHD----GVSK-GKY----T--VGLGQDCMAFCSE---------------VEDVISMSL 62 (280)
Q Consensus 9 ~~I~~ig~~lP~~~v~~~~~~~~~----g~~~-~~~----~--~~ig~r~~~~~~~---------------~e~~~~la~ 62 (280)
..|.++++++|+++++|.|+...+ .... +.| . .+|..|+...+.. -|.+.+|++
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v 81 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGV 81 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHH
Confidence 469999999999999997776542 1111 111 1 2444443222110 145899999
Q ss_pred HHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHHHHHHHHHHHHhcCCC
Q 023575 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVESASWD 141 (280)
Q Consensus 63 ~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~aL~~A~~~l~~g~~~ 141 (280)
+|.++||+.+++.|+|||+|+++|+|+. ..|+..+++.+.|++. +++..+.+.. ||+++..||..|.+|++++ |
T Consensus 82 ~a~r~aL~~~~l~pedId~vv~vtsTG~-~~Ps~dari~~~Lgl~--p~~~Rvpv~glGCaaga~glara~~y~ra~--P 156 (356)
T COG3424 82 DALRRALDGSPLRPEDIDAVVTVTSTGL-ATPSLDARIVGELGLS--PDTRRVPVWGLGCAAGAAGLARARDYCRAA--P 156 (356)
T ss_pred HHHHHHhccCCCCHHHCcEEEEEeeccc-cCCChhHHHHhhcCCC--CccceeeeecchhhhhhhHHHHHHHHHhhC--c
Confidence 9999999999999999999999999999 7899999887777664 4677888764 9999999999999999999 6
Q ss_pred CCeEEEEEecccccc----CC-C----CCcccCCceEEEEECCCCCc-e---eeccccccccccccccccCCCCCccccc
Q 023575 142 GRYGLVVCTDSAVYA----EG-P----ARPTGGAAAVAMLIGPDAPI-A---FESKLRGSHMSHAYDFYKPNLASEYPVV 208 (280)
Q Consensus 142 ~~~vLvv~~e~~s~~----~~-~----~~~~fGDgAaA~ll~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (280)
..+|||||.|.||.+ ++ . ...+||||++|+|++.+... + .....+++.+.-.++- .. ...|.+.
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~ds-e~--~Mgwdv~ 233 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDS-ED--IMGWDVG 233 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCcc-cc--ccceeec
Confidence 699999999999832 22 1 46899999999999986431 1 1111222222211110 00 0112222
Q ss_pred CCcc----h--H-HHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhh--------hhhhc-
Q 023575 209 DGKL----S--Q-TCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFF--------NDFLR- 272 (280)
Q Consensus 209 ~g~~----~--~-~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~--------~~~~~- 272 (280)
|..+ + . ......+...+..+ |..++|+.+||+.|+.|++++|+++++.+.||+ +++++
T Consensus 234 d~G~~~vlSrdlp~lIe~~l~~~V~~f------L~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~ 307 (356)
T COG3424 234 DQGLKVVLSRDLPNLIESYLAPNVTTF------LATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLRE 307 (356)
T ss_pred CCcEEEEEcCchhHHHHHHhhhhHHHH------HHHcCCchhhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 2211 1 1 12233444555554 899999999999999999999999999999997 34554
Q ss_pred --cCCCCCC
Q 023575 273 --NASLPSI 279 (280)
Q Consensus 273 --NtssasI 279 (280)
|||||||
T Consensus 308 ~GNMSSatv 316 (356)
T COG3424 308 YGNMSSATV 316 (356)
T ss_pred hCCccchhh
Confidence 9999997
No 34
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.5e-33 Score=259.64 Aligned_cols=167 Identities=15% Similarity=0.276 Sum_probs=134.9
Q ss_pred CCCceeEEeEEEEecCC--ccccHHHHHHhh---C-CCCCe------e--eeccCceeeecCC------C-------CCC
Q 023575 4 WHPKNVGILALDIYFPP--TCVLQEALEVHD---G-VSKGK------Y--TVGLGQDCMAFCS------E-------VED 56 (280)
Q Consensus 4 ~~~~~~~I~~ig~~lP~--~~v~~~~~~~~~---g-~~~~~------~--~~~ig~r~~~~~~------~-------~e~ 56 (280)
.+.+.++++..++|.|+ ++++.+.+.++. | .+++. + ++|+|..+ +++. + .+.
T Consensus 97 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t-~~p~~~~~~~~~~~~~~~~~E 175 (511)
T PLN02192 97 TRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGEST-YLPEAVLNVPPNPCMAEARKE 175 (511)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcc-cCChhhccCCCCccHHHHHHH
Confidence 35668999999999998 589999888764 3 23331 1 17888765 3332 1 234
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc-ccCchHHHHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~-~~C~g~~~aL~~A~~~l 135 (280)
+..++..|+++||+++|++|+|||+||++ +++++..|+.++.|++.+++. .++.+||++ .||+||+.||++|++++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGlr--~~i~afdLsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR--GNILSYNLGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCCC--CCceEEEcccchhhhHHHHHHHHHHHH
Confidence 78999999999999999999999999987 568888999999988888653 368999999 59999999999999999
Q ss_pred HhcCCCCCeEEEEEecccc--c---cCCCC---CcccCCceEEEEECCC
Q 023575 136 ESASWDGRYGLVVCTDSAV--Y---AEGPA---RPTGGAAAVAMLIGPD 176 (280)
Q Consensus 136 ~~g~~~~~~vLvv~~e~~s--~---~~~~~---~~~fGDgAaA~ll~~~ 176 (280)
++++ .++||||++|.++ + +++.+ ..+|||||+|+||++.
T Consensus 253 ~a~~--~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 253 QVHP--NSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred HcCC--CCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEecc
Confidence 9995 4999999999987 2 23333 4799999999999984
No 35
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.98 E-value=1.4e-32 Score=221.52 Aligned_cols=173 Identities=54% Similarity=0.866 Sum_probs=147.7
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEE
Q 023575 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (280)
Q Consensus 5 ~~~~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (280)
|+++++|.+++.|+|+..++.+++++..|.++++|..|+|+.++++++++|++.+||+.|++++|++.+++|++|+.|++
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v 80 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV 80 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence 46789999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccccCCCCCccc
Q 023575 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTG 164 (280)
Q Consensus 85 ~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~~~~~~~~~f 164 (280)
+|.|+.+...+.+.+|+++|++.|.+++..+|+.++|.|+..||+.|.+|++++.+|++++|||++|...|.....+.+.
T Consensus 81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g~~e~Tq 160 (174)
T PF01154_consen 81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLGSAEPTQ 160 (174)
T ss_dssp E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STTTTGGG-
T ss_pred eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCCCccccc
Confidence 99999989999999999999987767889999999999999999999999999876779999999999998877678999
Q ss_pred CCceEEEEECCCC
Q 023575 165 GAAAVAMLIGPDA 177 (280)
Q Consensus 165 GDgAaA~ll~~~~ 177 (280)
|-||+|+||+++.
T Consensus 161 GAGAVAmLi~~na 173 (174)
T PF01154_consen 161 GAGAVAMLIGPNA 173 (174)
T ss_dssp EEEEEEEEEECS-
T ss_pred cceeEEEEecCCC
Confidence 9999999999864
No 36
>PLN00415 3-ketoacyl-CoA synthase
Probab=99.97 E-value=4.3e-30 Score=236.88 Aligned_cols=169 Identities=16% Similarity=0.262 Sum_probs=128.2
Q ss_pred CCCceeEEeEEEEecCC--ccccHHHHHHhh---C-CCCCe------ee--eccCcee---------eecCC--CCCCHH
Q 023575 4 WHPKNVGILALDIYFPP--TCVLQEALEVHD---G-VSKGK------YT--VGLGQDC---------MAFCS--EVEDVI 58 (280)
Q Consensus 4 ~~~~~~~I~~ig~~lP~--~~v~~~~~~~~~---g-~~~~~------~~--~~ig~r~---------~~~~~--~~e~~~ 58 (280)
.+.+.++++..++|.|+ ++++.+.+.+.. | .+++- +. +|+|... ++.+. +.....
T Consensus 55 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~ 134 (466)
T PLN00415 55 TRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHES 134 (466)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHH
Confidence 35678999999999987 688888877642 2 12221 11 4555432 11221 223345
Q ss_pred HHHHH-HHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHHHHHHHHHHHH
Q 023575 59 SMSLT-VVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVE 136 (280)
Q Consensus 59 ~la~~-Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~aL~~A~~~l~ 136 (280)
+|+.. |+++||+++|++|+|||+||+ ++|+++..|+.++.+++.+++. +++.+||+++ ||+|++.||++|.++++
T Consensus 135 em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr--~~v~~~dL~gmGCsggv~aL~lA~~ll~ 211 (466)
T PLN00415 135 ELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLK--TDVKTYNLSGMGCSAGAISVDLATNLLK 211 (466)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCC--CCceEEEeccccchHHHHHHHHHHHHHH
Confidence 66666 778999999999999999985 5788878999999988888653 4789999997 99999999999999999
Q ss_pred hcCCCCCeEEEEEeccccc---c--CCC---CCcccCCceEEEEECCCC
Q 023575 137 SASWDGRYGLVVCTDSAVY---A--EGP---ARPTGGAAAVAMLIGPDA 177 (280)
Q Consensus 137 ~g~~~~~~vLvv~~e~~s~---~--~~~---~~~~fGDgAaA~ll~~~~ 177 (280)
++ +.++||||++|.++. . ++. ...+|||||+|+||++++
T Consensus 212 a~--~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 212 AN--PNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRS 258 (466)
T ss_pred hC--CCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCc
Confidence 99 459999999999872 2 222 258999999999999853
No 37
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.94 E-value=6.8e-27 Score=197.77 Aligned_cols=167 Identities=22% Similarity=0.302 Sum_probs=127.6
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhh----CCCC-----Ceee-----eccCceeeecCC------C------------
Q 023575 6 PKNVGILALDIYFPPTCVLQEALEVHD----GVSK-----GKYT-----VGLGQDCMAFCS------E------------ 53 (280)
Q Consensus 6 ~~~~~I~~ig~~lP~~~v~~~~~~~~~----g~~~-----~~~~-----~~ig~r~~~~~~------~------------ 53 (280)
.+..+|.+||+.+|+++++++++.+.+ +.+. +++. ++|..|+..++. +
T Consensus 12 ~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~ 91 (226)
T PF00195_consen 12 PGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAE 91 (226)
T ss_dssp SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHH
T ss_pred CCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHH
Confidence 456899999999999999999998752 3222 2222 567766544321 0
Q ss_pred -----CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHHH
Q 023575 54 -----VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAA 127 (280)
Q Consensus 54 -----~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~a 127 (280)
.+.+.+|+.+|+++||+++|++++||++||++|||+. ..|+...+|.+.|++. +++..+.+.+ ||+|++.|
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL~--~~v~R~~i~~~GC~gg~~~ 168 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGLR--PDVQRTPIFGMGCAGGAAG 168 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT----TTSEEEEEES-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCCC--CCcEEEEEeccchhhHHHH
Confidence 1347899999999999999999999999999999998 6899999988888775 4688888875 99999999
Q ss_pred HHHHHHHHHhcCCCCCeEEEEEecccc--cc-C-CC------CCcccCCceEEEEECCCC
Q 023575 128 LFNCVNWVESASWDGRYGLVVCTDSAV--YA-E-GP------ARPTGGAAAVAMLIGPDA 177 (280)
Q Consensus 128 L~~A~~~l~~g~~~~~~vLvv~~e~~s--~~-~-~~------~~~~fGDgAaA~ll~~~~ 177 (280)
|.+|..+.+++ |+.+||||+.|.++ +. + .. ...+|||||+|+||+.+|
T Consensus 169 L~~A~~~~~~~--p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 169 LRRAKDIARAN--PGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHS--TT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHhCC--ccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999 66999999999998 32 1 11 357999999999998764
No 38
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.91 E-value=4.4e-24 Score=185.92 Aligned_cols=177 Identities=15% Similarity=0.098 Sum_probs=135.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHH
Q 023575 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWV 135 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l 135 (280)
+..+|+.+|++++|+++|++++|||.||++++++++..|+.+.+++..++. ++.+++++.++|++++.||+.|.++|
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~---~~~~~~~i~~~C~s~~~al~~A~~~i 82 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI---SGGPAYSVNQACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCC---CCCCcceeccHhHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999987789999988877754 35778999999999999999999999
Q ss_pred HhcCCCCCeEEEEEeccccccCCCCCcccCCceEEEEECCCCCc-e----eeccccccccccccccccCCCCCcccccCC
Q 023575 136 ESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPI-A----FESKLRGSHMSHAYDFYKPNLASEYPVVDG 210 (280)
Q Consensus 136 ~~g~~~~~~vLvv~~e~~s~~~~~~~~~fGDgAaA~ll~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 210 (280)
++|.+ +++||+++|. .+|||||+|+||++.+.. . ......+..... .+. ....
T Consensus 83 ~~g~~--~~~lv~~~e~---------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~-----~~~--~~~~---- 140 (254)
T cd00327 83 QNGKA--DIVLAGGSEE---------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATF-----DGA--SMVP---- 140 (254)
T ss_pred HCCCC--CEEEEEecce---------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcC-----CCC--CCCC----
Confidence 99966 9999999998 799999999999986421 0 110011111000 000 0000
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHHHHHHHhhh
Q 023575 211 KLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFF 267 (280)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~ 267 (280)
......+.++++.+ |+++|++++|||+|++||++.++++.+.+.+++
T Consensus 141 ----~~~~~~~~~~i~~~------l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~ 187 (254)
T cd00327 141 ----AVSGEGLARAARKA------LEGAGLTPSDIDYVEAHGTGTPIGDAVELALGL 187 (254)
T ss_pred ----CCChHHHHHHHHHH------HHHcCCCHHHCCEEEccCCcCccccHHHHHHHH
Confidence 01122333344433 789999999999999999999999999888775
No 39
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.87 E-value=1.8e-21 Score=169.07 Aligned_cols=170 Identities=21% Similarity=0.324 Sum_probs=137.1
Q ss_pred CCCCceeEEeEEEEecCC--ccccHHHHHHhhC----CCCC------eee--eccCceeeecCC------CC-------C
Q 023575 3 SWHPKNVGILALDIYFPP--TCVLQEALEVHDG----VSKG------KYT--VGLGQDCMAFCS------EV-------E 55 (280)
Q Consensus 3 ~~~~~~~~I~~ig~~lP~--~~v~~~~~~~~~g----~~~~------~~~--~~ig~r~~~~~~------~~-------e 55 (280)
+.+.+.++++..++|-|+ ++++.+.+.++.. .+++ ++. +|+|.++. ++. ++ +
T Consensus 3 ~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy-~P~~~~~~p~~~s~~~a~~ 81 (290)
T PF08392_consen 3 MRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETY-LPPALHEIPPDPSLAAARE 81 (290)
T ss_pred cCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCcccc-CCcccccCCCcccHHHHHH
Confidence 356778999999999998 5899999988642 2332 121 78887753 332 11 2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHHHHHHHHHH
Q 023575 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNW 134 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~aL~~A~~~ 134 (280)
.+..++..|++++|+++|++|+|||.||+.+++. .+.|+.+++|++..++. +++..|++++ ||++++.+++.|+++
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~mr--~di~~~nLsGMGCsAgliai~lA~~l 158 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGMR--SDIKSYNLSGMGCSAGLIAIDLAKDL 158 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCCC--cCeeeecccCCcchhhHHHHHHHHHH
Confidence 3667889999999999999999999999887664 58999999998888764 4799999975 999999999999999
Q ss_pred HHhcCCCCCeEEEEEecccc---cc--CC---CCCcccCCceEEEEECCCCC
Q 023575 135 VESASWDGRYGLVVCTDSAV---YA--EG---PARPTGGAAAVAMLIGPDAP 178 (280)
Q Consensus 135 l~~g~~~~~~vLvv~~e~~s---~~--~~---~~~~~fGDgAaA~ll~~~~~ 178 (280)
++.. |..+||||+.|.++ |. ++ -...+|+||++|+||++.+.
T Consensus 159 L~~~--p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 159 LQAH--PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred HHhC--CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence 9999 56999999999997 32 22 25789999999999998753
No 40
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.87 E-value=1.1e-21 Score=177.42 Aligned_cols=197 Identities=15% Similarity=0.113 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHcCCC----CCCccEEEEecccCCCC---------------------CCchHHHHHHHHHhcCCCC
Q 023575 57 VISMSLTVVTSLLEKYKID----PTQIGRLEVGSETVIDK---------------------SKSIKTFLMQIFEKYGNTD 111 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~----~~~Id~li~~t~t~~~~---------------------~p~~a~~l~~~l~~~g~~~ 111 (280)
..+|+++|+++||+++|++ +++||.||++|+++.+. .|+.+..++..+++ +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~ 86 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----H 86 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC----C
Confidence 7889999999999999999 99999999998877654 67777777777654 3
Q ss_pred eeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc---c-------------------CCCCCcccCCceE
Q 023575 112 IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY---A-------------------EGPARPTGGAAAV 169 (280)
Q Consensus 112 ~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~---~-------------------~~~~~~~fGDgAa 169 (280)
.+++++..+|++++.||+.|..+|++|.+ +++||+++|..+. . ......+|||||+
T Consensus 87 g~~~~v~~~cas~~~al~~A~~~i~~g~~--~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaa 164 (332)
T cd00825 87 GPAYDVSAACAGSLHALSLAADAVQNGKQ--DIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAG 164 (332)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEE
Confidence 56899999999999999999999999966 9999999998641 0 1124678999999
Q ss_pred EEEECCCCCc-----eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccC
Q 023575 170 AMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (280)
Q Consensus 170 A~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~d 244 (280)
|+||++.+.. .+.....+.. ... .+.. . +.+ ......+..+++. +|+++|++++|
T Consensus 165 A~vL~~~~~a~~~~~~~~~~i~~~~-~~~----~~~~-~------~~~--~~~~~~~~~~i~~------al~~agl~~~d 224 (332)
T cd00825 165 ALVVEELEHALARGAHIYAEIVGTA-ATI----DGAG-M------GAF--APSAEGLARAAKE------ALAVAGLTVWD 224 (332)
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEE-Ecc----CCCC-C------CCC--CcCHHHHHHHHHH------HHHHcCCCHhH
Confidence 9999975421 1110000110 000 0000 0 000 0011222333333 38899999999
Q ss_pred ccEEecCCCChHHHHHHHHHhhhhhh----------h-c--cCCCCCC
Q 023575 245 VDYFVFHSPYNKLVQKSFARLFFNDF----------L-R--NASLPSI 279 (280)
Q Consensus 245 Id~~v~Hq~n~~~~~~~~~~l~~~~~----------~-~--NtssasI 279 (280)
||++++||.+.++.+.+.++++.... . + |+++||.
T Consensus 225 id~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~ 272 (332)
T cd00825 225 IDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAV 272 (332)
T ss_pred CCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhH
Confidence 99999999999998888776654311 1 2 9988875
No 41
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.82 E-value=2.6e-19 Score=157.71 Aligned_cols=220 Identities=14% Similarity=0.056 Sum_probs=147.1
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeee--eccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~--~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
+..|.+.++..-+.. .+--+.+.++ .+. ...|+++ ++++..+|+.+|+++||+++|++++|||++|++
T Consensus 9 ~p~i~~~~~~~g~~e-~~gpl~~~fd----~~~~d~~~g~ks-----~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvG 78 (327)
T TIGR02845 9 PPVIVSAGTAVGPKE-GEGPLGDYFD----KIYDDLYCGEDS-----WEKAERKLMEDAVNLALKKANLKKDDVDFFLAG 78 (327)
T ss_pred CCEEEEEEEEecCcc-ccCCChhhCC----EEEeccccCCcC-----cchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 478888888776542 1111222222 221 2345432 235678999999999999999999999999998
Q ss_pred cccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------c---
Q 023575 86 SETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y--- 155 (280)
Q Consensus 86 t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~--- 155 (280)
+ ++++ +..++++++.| |+ +.||+.++|++|++||.+|..++++|.+ ++||||++|..+ +
T Consensus 79 d-l~~Q--~~~As~vA~~L---GI---P~fdV~~ACSTf~~AL~lAa~lI~SG~a--d~VLVV~Ssh~S~AErqfr~p~e 147 (327)
T TIGR02845 79 D-LLNQ--IITANFVARDL---GI---PFLGLYGACSTSMETLALGAMLVDGGFA--DRVLAATSSHYATAERQFRYPTE 147 (327)
T ss_pred C-CCCc--ccHHHHHHHHh---CC---CEEEEeccCHHHHHHHHHHHHHHhCCCC--CEEEEEEecccchhhhhcccccc
Confidence 7 4443 45677766665 42 5699999999999999999999999976 999999988765 1
Q ss_pred ---cCCCCCcccCCceEEEEECCCCCc-eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHH
Q 023575 156 ---AEGPARPTGGAAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (280)
Q Consensus 156 ---~~~~~~~~fGDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 231 (280)
.+++++.+|||||+|+||++.+.. .+-. .+.|+- -|+ |. .|. +.+. .-....+.+.+.
T Consensus 148 yg~q~~~ta~~tgdGAGA~vl~~~~~~~~i~~---~t~gkv-~d~-----g~----~d~-~nmg--aamapaa~dti~-- 209 (327)
T TIGR02845 148 YGVQKPPTAQWTVTGAGAVLLASTGGGPRITS---ATIGKV-VDY-----GI----TDP-LDMG--AAMAPAAADTIE-- 209 (327)
T ss_pred cccCCCCeeeEEEcccEEEEEeecCCCCceEE---EEEEEE-Eec-----CC----CCc-ccch--hhhhHHHHHHHH--
Confidence 124578899999999999987532 2222 122331 111 00 000 0000 001123444443
Q ss_pred HHhhhcCCCCccCccEEecC---CCChHHHHHHHHHhhh
Q 023575 232 FEKLEGRQFSMLDVDYFVFH---SPYNKLVQKSFARLFF 267 (280)
Q Consensus 232 ~~~L~~~gl~~~dId~~v~H---q~n~~~~~~~~~~l~~ 267 (280)
..|+..|.+++|.|.++.- ..+.+|+..++++-|+
T Consensus 210 -~h~~d~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~ 247 (327)
T TIGR02845 210 -AHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKERGY 247 (327)
T ss_pred -HHHHHcCCChhhccEEEecchHHHHHHHHHHHHHHcCC
Confidence 3478899999999999975 4678888888887764
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.78 E-value=6.1e-18 Score=154.21 Aligned_cols=224 Identities=14% Similarity=0.063 Sum_probs=147.3
Q ss_pred eeEEeEEEEecCCcc------------ccHHHHHHhhCCC-CCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcC-
Q 023575 8 NVGILALDIYFPPTC------------VLQEALEVHDGVS-KGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYK- 73 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~------------v~~~~~~~~~g~~-~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~ag- 73 (280)
++.|.+.|..-|=-. ++|.+.....+.. ++||....+.+.+++. ..+...+|+.+|++++|++++
T Consensus 4 ~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~r~~~La~~Al~~aL~~a~~ 82 (348)
T PRK06147 4 ALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWR-GPERLAEMAAPAIAEALEGLPA 82 (348)
T ss_pred ceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccC-chHHHHHHHHHHHHHHHHhccc
Confidence 578888888777532 3333333334443 5677755555555563 457889999999999999999
Q ss_pred CCCCCccEEEEecc-----cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEE
Q 023575 74 IDPTQIGRLEVGSE-----TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVV 148 (280)
Q Consensus 74 i~~~~Id~li~~t~-----t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv 148 (280)
+++++||++|+.+. ++++..|+.+..+++.++. + .+.++++++.+|+++++||..|..+|+.|.+ +.+||+
T Consensus 83 ~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~-~-~~~~~~~i~~~casg~~Al~~A~~~i~~G~~--~~~lvg 158 (348)
T PRK06147 83 LDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGL-R-LEPGSAVIARGRVSGAVALAQARRLIAAGGC--PRVLVA 158 (348)
T ss_pred ccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCC-C-CCCCcccccccchHHHHHHHHHHHHHHcCCC--CEEEEE
Confidence 79999999998654 2333445556666665554 1 2356799999999999999999999999976 999999
Q ss_pred Eeccccc---------------cCCCCCcccCCceEEEEECCCCCc-----eeeccccccccccccccccCCCCCccccc
Q 023575 149 CTDSAVY---------------AEGPARPTGGAAAVAMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVV 208 (280)
Q Consensus 149 ~~e~~s~---------------~~~~~~~~fGDgAaA~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (280)
++|..+. .++.+.++|||||+++||++.+.. .+.. .+ ++.+........ ..| .
T Consensus 159 g~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a--~g-~~~~~~~~~~~~---~~p-~ 231 (348)
T PRK06147 159 GVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LG-LGREPAPVGESE---DLP-L 231 (348)
T ss_pred eeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceEE--EE-EeecCCCcccCC---CCC-C
Confidence 9997531 122456799999999999975421 2222 11 111111100000 001 0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHH
Q 023575 209 DGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 209 ~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~ 257 (280)
++ ..+..+++. +|+++|++++||||+..|-.+.+.
T Consensus 232 ~g--------~gl~~ai~~------AL~~agl~~~dId~v~ah~~gt~~ 266 (348)
T PRK06147 232 RG--------DGLTQAIRA------ALAEAGCGLEDMDYRIADLNGEQY 266 (348)
T ss_pred Ch--------HHHHHHHHH------HHHHcCCCHHHCCEEEcCCCCCcc
Confidence 11 223333333 388999999999999999765444
No 43
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.75 E-value=3.2e-17 Score=144.92 Aligned_cols=220 Identities=13% Similarity=0.046 Sum_probs=146.4
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeee--eccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~--~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
++.|.+.++..-+.. .+--+.+.++ ++. ..+|.++ +++...+|+.+|+++||+++|++++|||++|++
T Consensus 15 ~p~i~~~~~~~g~~E-~~gpl~~~fd----~~~~d~~~Ge~s-----wEkAeseLa~eAa~~ALekAGI~~~DID~lI~G 84 (337)
T PRK08304 15 PPYIISTGTIVGPKE-GEGPLGKYFD----KILDDDYCGEKS-----WEKAERKMMEDAIQQALQKANLKKSDIDYLLAG 84 (337)
T ss_pred CCEEEEEEEEecCcc-cCCCChhhCC----eEecccccCCcC-----ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 477888888776542 1111222222 211 1234321 245678999999999999999999999999999
Q ss_pred cccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-----cc----
Q 023575 86 SETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-----YA---- 156 (280)
Q Consensus 86 t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-----~~---- 156 (280)
+. .. .+..+.++++.| | ++++++.++|+++..||.+|..++++|.+ ++||||++|..+ |+
T Consensus 85 dl-l~--Q~~sAs~vA~~L---G---IPa~dV~gACST~~~AL~lAa~lI~SG~a--d~VLVV~Ssh~s~aerqfr~P~e 153 (337)
T PRK08304 85 DL-LN--QIISANFAAREL---G---IPFLGLYGACSTMMESLALGSMLIDGGFA--DRVLAATSSHFATAERQFRFPTE 153 (337)
T ss_pred CC-CC--CcchHHHHHHHh---C---CcEEEEeccCHHHHHHHHHHHHHHhcCCC--CEEEEEEcchhhhhhhhccCchh
Confidence 75 32 245677766555 4 36899999999999999999999999976 999999999875 21
Q ss_pred ---CC-CCCcccCCceEEEEECCCCCc-eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHH
Q 023575 157 ---EG-PARPTGGAAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (280)
Q Consensus 157 ---~~-~~~~~fGDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 231 (280)
.+ ++...++|||+|+||++.+.. .+-. .+.|+- -|+ |..-| .| +. .-....+.+.+.
T Consensus 154 yg~qrp~taqwtvtGAGA~i~~~~~~~~~i~~---~t~Gkv-~D~-----g~~d~-~n----mg--aaMapAa~dti~-- 215 (337)
T PRK08304 154 YGGQRPPTAQWTVTGAGAVLLSREGSGPRITH---ATIGKV-VDL-----GIKDP-ND----MG--AAMAPAAADTIQ-- 215 (337)
T ss_pred ccccCCCcceEEeeccEEEEEecCCCCceEEE---EeEEEE-Eec-----CCCCc-cc----ch--hhhhHHHHHHHH--
Confidence 12 467789999999999987532 2222 222331 111 00000 00 00 001123444443
Q ss_pred HHhhhcCCCCccCccEEecC---CCChHHHHHHHHHhhh
Q 023575 232 FEKLEGRQFSMLDVDYFVFH---SPYNKLVQKSFARLFF 267 (280)
Q Consensus 232 ~~~L~~~gl~~~dId~~v~H---q~n~~~~~~~~~~l~~ 267 (280)
..|+..|.+++|.|.++.- ..+.+|+++++++-|+
T Consensus 216 -~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~ 253 (337)
T PRK08304 216 -QHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKEEGY 253 (337)
T ss_pred -HHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHHhCC
Confidence 3478899999999999975 5678888888887765
No 44
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.62 E-value=1.8e-14 Score=133.95 Aligned_cols=225 Identities=13% Similarity=0.095 Sum_probs=134.6
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCCC-----C-e---eee-------ccCceeeecCC----CCCCHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVSK-----G-K---YTV-------GLGQDCMAFCS----EVEDVISMSLTV 64 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~~-----~-~---~~~-------~ig~r~~~~~~----~~e~~~~la~~A 64 (280)
+.+.|+|+|..+|.-. +.+++.+.+ |.+. . + +.. ....+ .+++. .-.....|+.+|
T Consensus 1 ~~i~I~G~g~~~p~g~-~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~a 78 (406)
T cd00834 1 RRVVITGLGAVTPLGN-GVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPE-DYLDRKELRRMDRFAQFALAA 78 (406)
T ss_pred CcEEEECcceeCCCcC-CHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChh-hcCCHHHhccCCHHHHHHHHH
Confidence 3689999999999874 556655542 2210 0 0 000 00000 00110 112357899999
Q ss_pred HHHHHHHcCCCCCCccE----EEEecccCCC--------------------------CCCchHHHHHHHHHhcCCCCeee
Q 023575 65 VTSLLEKYKIDPTQIGR----LEVGSETVID--------------------------KSKSIKTFLMQIFEKYGNTDIEG 114 (280)
Q Consensus 65 a~~aL~~agi~~~~Id~----li~~t~t~~~--------------------------~~p~~a~~l~~~l~~~g~~~~~~ 114 (280)
+++||+++|+++++||. ++++++.+.. ..+..+.+++..++ ++ -++
T Consensus 79 a~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg---l~-g~~ 154 (406)
T cd00834 79 AEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG---LR-GPN 154 (406)
T ss_pred HHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC---CC-Ccc
Confidence 99999999999877664 5555544321 12335555665554 33 367
Q ss_pred eeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc--c-------------------------cCCCCCcccCCc
Q 023575 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV--Y-------------------------AEGPARPTGGAA 167 (280)
Q Consensus 115 ~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s--~-------------------------~~~~~~~~fGDg 167 (280)
+.+..+|++++.||..|..+|++|.+ +++||+++|..+ + +.+....++|||
T Consensus 155 ~~v~~acas~~~Al~~A~~~i~~G~~--d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geG 232 (406)
T cd00834 155 YTVSTACASGAHAIGDAARLIRLGRA--DVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEG 232 (406)
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCC--CEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeecc
Confidence 89999999999999999999999977 999999998764 0 011235689999
Q ss_pred eEEEEECCCCCc-----eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 023575 168 AVAMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM 242 (280)
Q Consensus 168 AaA~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~ 242 (280)
|+|+||++.+.. .+.... ...+...+..... .+..++ .....+++ ++|+++|+++
T Consensus 233 A~a~vL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~-----~~~~~~--------~~~~~~i~------~al~~agi~~ 292 (406)
T cd00834 233 AGVLVLESLEHAKARGAKIYAEI-LGYGASSDAYHIT-----APDPDG--------EGAARAMR------AALADAGLSP 292 (406)
T ss_pred EEEEEEecHHHHHHCCCeEEEEE-EEEEecccCCCCC-----CCCCCc--------HHHHHHHH------HHHHHcCCCH
Confidence 999999975421 111111 1111111100000 011011 12222333 2378899999
Q ss_pred cCccEEecCCCChHHHH
Q 023575 243 LDVDYFVFHSPYNKLVQ 259 (280)
Q Consensus 243 ~dId~~v~Hq~n~~~~~ 259 (280)
+|||++.+|..+....+
T Consensus 293 ~dId~v~~h~tgt~~~d 309 (406)
T cd00834 293 EDIDYINAHGTSTPLND 309 (406)
T ss_pred HHCCEEecccccCcccc
Confidence 99999999987765444
No 45
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.57 E-value=1.5e-15 Score=109.22 Aligned_cols=73 Identities=21% Similarity=0.165 Sum_probs=56.8
Q ss_pred eeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccccc-c---CCCCCcccCCceEEEEECCCCC--ceeecccccc
Q 023575 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY-A---EGPARPTGGAAAVAMLIGPDAP--IAFESKLRGS 188 (280)
Q Consensus 115 ~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s~-~---~~~~~~~fGDgAaA~ll~~~~~--~~~~~~~~~~ 188 (280)
||++++|+|+++||++|.+++++|.+ ++||||++|+.+. - ++....+|||||+|+||+++++ .+++...+.+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~--~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~~~~~~~il~~~~~t 78 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRA--KNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRDEEGGFGILDSHLRT 78 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS---SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEESSSSCEEEEEEEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccC--CEEEEEeeccccccccccccCcceeecchheEEEEEecCCCCCeEEEEEEEc
Confidence 79999999999999999999999965 9999999999873 2 2235679999999999999742 3666654444
Q ss_pred c
Q 023575 189 H 189 (280)
Q Consensus 189 ~ 189 (280)
+
T Consensus 79 d 79 (80)
T PF08545_consen 79 D 79 (80)
T ss_dssp -
T ss_pred C
Confidence 4
No 46
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.55 E-value=1.9e-13 Score=126.01 Aligned_cols=96 Identities=14% Similarity=0.102 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
+.+..+|+.+|++++|+++|+++++||.++++++.+....|..+..++..++ .+..++++++.+|++++.++..|..
T Consensus 13 ~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lG---l~~~~~~~v~~~c~sg~~al~~Aa~ 89 (375)
T cd00829 13 DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLG---LLGKPATRVEAAGASGSAAVRAAAA 89 (375)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcC---CCCcceeeEeCccHHHHHHHHHHHH
Confidence 6789999999999999999999999999999887666444666776666654 4457889999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEecccc
Q 023575 134 WVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~s 154 (280)
+|++|.+ +.|||+++|..+
T Consensus 90 ~I~sG~~--~~vlv~g~e~~s 108 (375)
T cd00829 90 AIASGLA--DVVLVVGAEKMS 108 (375)
T ss_pred HHHhCCC--CEEEEEEEeecc
Confidence 9999976 999999999653
No 47
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.53 E-value=3.6e-13 Score=124.74 Aligned_cols=96 Identities=20% Similarity=0.137 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCC--CCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~--~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~ 130 (280)
.+++..+|+.+|++++|+++|+++++||.||+++++++.. .|..+..++..+ |++..++++++.+|++++.++..
T Consensus 18 ~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~l---Gl~~~~~~~v~~aCasg~~ai~~ 94 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYA---GLAPIPATRVEAACASGGAALRQ 94 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHc---CCCCCCeeEEeCCcHHHHHHHHH
Confidence 3567899999999999999999999999999988766542 355666555555 44456789999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEeccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSA 153 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~ 153 (280)
|..+|++|.+ +++||+++|..
T Consensus 95 A~~~I~sG~~--~~vLv~G~e~~ 115 (389)
T PRK06064 95 AYLAVASGEA--DVVLAAGVEKM 115 (389)
T ss_pred HHHHHHCCCC--CEEEEEEEEec
Confidence 9999999976 99999999853
No 48
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.52 E-value=6.3e-14 Score=131.12 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcc----EEEEecccCCCC-------------------CCchHHHHHHHHHhcCCCCee
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDK-------------------SKSIKTFLMQIFEKYGNTDIE 113 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id----~li~~t~t~~~~-------------------~p~~a~~l~~~l~~~g~~~~~ 113 (280)
...|+.+|+++||+++|+++++|| .|++++.++++. .+..+..++..+ |++ -+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l---gl~-g~ 162 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFF---DLR-GP 162 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHh---CCC-CC
Confidence 356999999999999999999999 788887655432 223444455555 443 36
Q ss_pred eeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------c---------------cCCCCCcccCCceEEE
Q 023575 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y---------------AEGPARPTGGAAAVAM 171 (280)
Q Consensus 114 ~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~---------------~~~~~~~~fGDgAaA~ 171 (280)
++.+..+|++++.||..|..+|++|.+ +.+||+++|... + .......++||||+|+
T Consensus 163 ~~~v~~acasg~~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (424)
T smart00825 163 SVTVDTACSSSLVALHLACQSLRSGEC--DMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV 240 (424)
T ss_pred ccccccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence 789999999999999999999999977 999999998632 0 0012356789999999
Q ss_pred EECCC
Q 023575 172 LIGPD 176 (280)
Q Consensus 172 ll~~~ 176 (280)
||++.
T Consensus 241 VLe~~ 245 (424)
T smart00825 241 VLKRL 245 (424)
T ss_pred EEccH
Confidence 99975
No 49
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.52 E-value=2.7e-13 Score=119.41 Aligned_cols=222 Identities=15% Similarity=0.103 Sum_probs=140.1
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
++.|.+.++..-+.. .+--+.+.++.--+. ..+|+.+ | ++...+|+.+|+++||+++|++++|||+++.++.
T Consensus 13 ~p~i~~~~~v~G~~E-~~Gpl~~~FD~~~~d--~~~g~~s--w---EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL 84 (334)
T PRK12404 13 KPVIISTGVVGGPFE-AKGPLAEDFDLLHED--LWLGQDS--Y---EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDL 84 (334)
T ss_pred CCEEEEEEEEeCCcc-cCCCChhhCCeeecc--cccCCcc--h---HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 478888888776542 111122222211000 1234332 2 3456789999999999999999999999999987
Q ss_pred cCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------cc----
Q 023575 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------YA---- 156 (280)
Q Consensus 88 t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~~---- 156 (280)
+ .+..|+. ++++.| | ++.+++.++|+++..||.+|..++++|.+ ++||++++.... |.
T Consensus 85 ~-nQ~ipss--fvar~L---G---IP~~gV~gACSTg~eAL~lAa~~VaSG~A--d~VLavtsSH~~~aErqfR~P~eyG 153 (334)
T PRK12404 85 M-NQITPTS--FAARTL---G---IPYLGLFGACSTSMEGLALAALIVNSGGA--KYVLTGASSHNAAVEKQFRYPTEYG 153 (334)
T ss_pred C-CCcCcHH--HHHHHh---C---CCccceeecCHHHHHHHHHHHHHHHcCCC--CEEEEEeCcccchhhhhccCccccc
Confidence 7 4355554 655555 4 34589999999999999999999999976 999999886642 11
Q ss_pred -CC-CCCcccCCceEEEEECCCCCc-eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHH
Q 023575 157 -EG-PARPTGGAAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE 233 (280)
Q Consensus 157 -~~-~~~~~fGDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (280)
.+ +++.---=||+|+||++.+.. .+.. .+.|+- -|+ |.. |. +.+. .-....+.+.+. .
T Consensus 154 ~Qrp~taqwTvTgaga~~l~~~~~~~~i~~---~T~Gkv-~D~-----g~~----d~-~nMG--aaMAPAA~dti~---~ 214 (334)
T PRK12404 154 GQKPPTAQWTVTGAGAAILSKTGDGPRVTS---ATIGRV-VDM-----GLT----DP-FNMG--GAMAPAAVDTIE---A 214 (334)
T ss_pred CcCCCcccEEEEceEEEEEecCCCCceEEE---EEEEEE-Eec-----CCC----Cc-ccch--hhhhHHHHHHHH---H
Confidence 12 333333568889999876432 2322 122331 111 000 00 0000 001123344443 3
Q ss_pred hhhcCCCCccCccEEecC---CCChHHHHHHHHHhhh
Q 023575 234 KLEGRQFSMLDVDYFVFH---SPYNKLVQKSFARLFF 267 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~H---q~n~~~~~~~~~~l~~ 267 (280)
.|+..|.+++|.|.++.- ..+.+|+..++++-|+
T Consensus 215 h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~ 251 (334)
T PRK12404 215 HLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHKHGV 251 (334)
T ss_pred HHHHhCCChhhccEEEEcchHHHHHHHHHHHHHHcCC
Confidence 478899999999999975 4678888888887764
No 50
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.49 E-value=1.7e-12 Score=121.52 Aligned_cols=226 Identities=13% Similarity=0.050 Sum_probs=131.7
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC---C-Ce-----eeeccCceeeecCC----CCCCHHHHHHHHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GK-----YTVGLGQDCMAFCS----EVEDVISMSLTVVTSLLEK 71 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~---~-~~-----~~~~ig~r~~~~~~----~~e~~~~la~~Aa~~aL~~ 71 (280)
+.|.|.|+|...|--. +.+++.+.+ |.+ + +. +...++-.-..... .......|+..|+++||++
T Consensus 11 ~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~aa~~Al~d 89 (425)
T PRK06501 11 PIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESPFGASALSEALARLAAEEALAQ 89 (425)
T ss_pred cCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccccccccCHHHHHHHHHHHHHHHH
Confidence 5799999999998764 667766542 221 0 11 11111100000000 0112456889999999999
Q ss_pred cCCCCCCcc------------------EEEEecc---------------cCCC-------CCCchHHHHHHHHHhcCCCC
Q 023575 72 YKIDPTQIG------------------RLEVGSE---------------TVID-------KSKSIKTFLMQIFEKYGNTD 111 (280)
Q Consensus 72 agi~~~~Id------------------~li~~t~---------------t~~~-------~~p~~a~~l~~~l~~~g~~~ 111 (280)
+|+++.+++ .++.++. .+++ ..|+.+..++..++ ++
T Consensus 90 Agl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~g---l~- 165 (425)
T PRK06501 90 AGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFG---TR- 165 (425)
T ss_pred cCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhC---CC-
Confidence 999654422 1122211 1111 23456666666554 42
Q ss_pred eeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecc---------------ccc-c-----------CCCCCccc
Q 023575 112 IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS---------------AVY-A-----------EGPARPTG 164 (280)
Q Consensus 112 ~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~---------------~s~-~-----------~~~~~~~f 164 (280)
-++++++.+|++++.||..|.++|++|.+ +.+||+++|. .+. . .+...+++
T Consensus 166 G~~~~i~~aCaS~~~Al~~A~~~I~~G~~--d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G~v~ 243 (425)
T PRK06501 166 GLPISLSTACASGATAIQLGVEAIRRGET--DRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFVM 243 (425)
T ss_pred CCceeecCccHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCCeee
Confidence 45799999999999999999999999977 9999999993 110 0 11234789
Q ss_pred CCceEEEEECCCCC-----ceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 023575 165 GAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQ 239 (280)
Q Consensus 165 GDgAaA~ll~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 239 (280)
||||+|+||++.+. ..+.....+.... .+...... +..++ ..+..+++ ++|+++|
T Consensus 244 GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~-~d~~~~~~-----~~~~~--------~~~~~ai~------~AL~~ag 303 (425)
T PRK06501 244 AEGAGALVLESLESAVARGAKILGIVAGCGEK-ADSFHRTR-----SSPDG--------SPAIGAIR------AALADAG 303 (425)
T ss_pred eccEEEEEECcHHHHHHCCCeEEEEEEEEEEc-cCCCCCCC-----CCCCH--------HHHHHHHH------HHHHHcC
Confidence 99999999997532 1233222222111 11111100 11111 12222333 3488899
Q ss_pred CCccCccEEecCCCChHHHH
Q 023575 240 FSMLDVDYFVFHSPYNKLVQ 259 (280)
Q Consensus 240 l~~~dId~~v~Hq~n~~~~~ 259 (280)
++++|||++.+|-.+....+
T Consensus 304 i~p~dId~i~~Hgtgt~~~d 323 (425)
T PRK06501 304 LTPEQIDYINAHGTSTPEND 323 (425)
T ss_pred CCHHHcCEEEecCccCcchH
Confidence 99999999999977665544
No 51
>PRK06158 thiolase; Provisional
Probab=99.47 E-value=3.5e-12 Score=117.93 Aligned_cols=102 Identities=11% Similarity=-0.022 Sum_probs=79.2
Q ss_pred eeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc
Q 023575 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (280)
Q Consensus 39 ~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~ 118 (280)
...|+|...+.. .++++..+|+.+|+++||+++|++++|||.|++++.. +..|+ ..+++. +|++..+++++.
T Consensus 11 aIvG~g~t~~~~-~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~--~~~~~--~~la~~---lGl~~~~~~~~~ 82 (384)
T PRK06158 11 AIVGAATAGLGE-APGLSAMELLAQAAHRALADAGLTMADVDGLFTASPD--DALWG--LSVAEY---LGIRPRFVDGTM 82 (384)
T ss_pred EEEEeeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC--CCCcH--HHHHHH---cCCCCeeecccc
Confidence 345666554322 2467899999999999999999999999999988632 23343 344444 455557788899
Q ss_pred ccCchHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q 023575 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCT 150 (280)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~ 150 (280)
.+|++++.+|..|..+|++|.+ ++|||+.+
T Consensus 83 ~g~~s~~~al~~A~~~I~sG~~--d~vLV~~g 112 (384)
T PRK06158 83 IGGSSFLAHLLPAALALEAGLC--DVALICYG 112 (384)
T ss_pred CccHHHHHHHHHHHHHHHcCCC--CEEEEeec
Confidence 9999999999999999999976 99999833
No 52
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.45 E-value=2.7e-13 Score=125.46 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
++++..+|+.+|+++||+++|++++|||.||+++.++++..|..+..++..+ |++ ++++++++++|++++.+|.+|
T Consensus 18 ~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~l---Gl~~~~~~~~v~~~c~s~~~al~~A 94 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLA---GLPESVPATTVNRVCGSGLQAVALA 94 (386)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHc---CCCCCCchhhhccccHHHHHHHHHH
Confidence 4588999999999999999999999999999988777765676665555444 554 378999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..+|++|.+ ++|||+++|..+
T Consensus 95 ~~~I~sG~~--~~vLv~g~e~~s 115 (386)
T cd00751 95 AQSIAAGEA--DVVVAGGVESMS 115 (386)
T ss_pred HHHHHCCCC--CeEEEeeeeccc
Confidence 999999976 999999999875
No 53
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.42 E-value=7.3e-13 Score=122.52 Aligned_cols=96 Identities=14% Similarity=0.169 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+++..+|+.+|+++||+++|++++|||.||+++.+++...|..+..++..++ +. ++++++++++|++++.+|..|.
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lG---l~~~~~~~~v~~~Casg~~al~~A~ 94 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAG---LPESVPAYTVNRQCASGLQAVILAA 94 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcC---CCCCceeeeecchhhHHHHHHHHHH
Confidence 5789999999999999999999999999999887776555666666655554 44 4789999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
++|++|.+ ++|||+++|..+
T Consensus 95 ~~I~sG~~--~~vLv~g~e~~s 114 (386)
T TIGR01930 95 QLIRAGEA--DVVVAGGVESMS 114 (386)
T ss_pred HHHHCCCC--CEEEEEEehhhc
Confidence 99999976 999999999865
No 54
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.39 E-value=2.3e-12 Score=120.38 Aligned_cols=115 Identities=14% Similarity=0.114 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccE----EEEecccCCCC-------------------CCchHHHHHHHHHhcCCCCee
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVIDK-------------------SKSIKTFLMQIFEKYGNTDIE 113 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~t~t~~~~-------------------~p~~a~~l~~~l~~~g~~~~~ 113 (280)
...|+.+|+++||+++|+++++++. +++++.++++. .+..+..+...+ |++ -+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~---gl~-g~ 162 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFF---DLR-GP 162 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHc---CCC-CC
Confidence 4789999999999999999988875 77776544320 122334444444 443 36
Q ss_pred eeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------c---------------cCCCCCcccCCceEEE
Q 023575 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y---------------AEGPARPTGGAAAVAM 171 (280)
Q Consensus 114 ~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~---------------~~~~~~~~fGDgAaA~ 171 (280)
++.+..+|++++.||..|..+|++|.+ +.+||+++|... + .......++||||+|+
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGEC--DLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence 789999999999999999999999977 999999999742 0 0112356799999999
Q ss_pred EECCCC
Q 023575 172 LIGPDA 177 (280)
Q Consensus 172 ll~~~~ 177 (280)
||++.+
T Consensus 241 vL~~~~ 246 (421)
T cd00833 241 VLKRLS 246 (421)
T ss_pred EEeeHH
Confidence 999753
No 55
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=1.9e-12 Score=120.04 Aligned_cols=97 Identities=13% Similarity=0.167 Sum_probs=82.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
.+++..+|+.+|+++||+++|++|+|||.||+++.++....|..+..++..+ |++ .+++++++.+|++++.++.+|
T Consensus 22 ~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~l---Gl~~~~p~~~V~~~Casg~~ai~~A 98 (393)
T PRK05656 22 ANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKA---GLPHSVPAMTLNKVCGSGLKALHLA 98 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHc---CCCCCcceEEecccchhHHHHHHHH
Confidence 3578899999999999999999999999999998776533455566555555 444 378999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..+|++|.+ +.+||+++|.++
T Consensus 99 ~~~I~sG~~--d~vLv~G~E~ms 119 (393)
T PRK05656 99 AQAIRCGDA--EVIIAGGQENMS 119 (393)
T ss_pred HHHHHcCCC--CEEEEEEEhhhc
Confidence 999999976 999999999886
No 56
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=3.3e-12 Score=118.18 Aligned_cols=108 Identities=17% Similarity=0.149 Sum_probs=85.1
Q ss_pred eccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecccc
Q 023575 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNA 120 (280)
Q Consensus 41 ~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~ 120 (280)
.|+|...+.. .++++..+|+.+|+++||+++|++++|||.||+++.++....+..+..++..++ ++..++++++++
T Consensus 6 vG~g~t~~~~-~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lG---l~~~~~~~v~~~ 81 (385)
T PRK12578 6 IGVGNSKFGR-RDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSG---LTGKVPLRVEAM 81 (385)
T ss_pred Eeecccceee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhC---CCCCCeeEEecc
Confidence 4566543222 246789999999999999999999999999999887654222334555555554 444567999999
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc
Q 023575 121 CYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 121 C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|++++.+|.+|..+|++|.+ ++||||++|..+
T Consensus 82 casg~~al~~A~~~I~sG~~--~~vLvvg~e~~s 113 (385)
T PRK12578 82 CATGLAASLTAYTAVASGLV--DMAIAVGVDKMT 113 (385)
T ss_pred CHHHHHHHHHHHHHHHCCCC--CEEEEEEEeecc
Confidence 99999999999999999976 999999999753
No 57
>PRK09051 beta-ketothiolase; Provisional
Probab=99.37 E-value=3.4e-12 Score=118.22 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=81.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
.+++..+|+.+|+++||+++|++|+|||.||++++++++..+...+... ....|++ ++++++++++|++|+.|+.+|
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~--~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A 100 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVA--AINAGVPQETPAFNVNRLCGSGLQAIVSA 100 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHH--HHHcCCCCCCceEEecccchHHHHHHHHH
Confidence 4678999999999999999999999999999998887654333333322 1223554 588999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.++|++|.+ +.+||+++|..+
T Consensus 101 ~~~I~sG~~--d~vLvvG~E~mS 121 (394)
T PRK09051 101 AQAILLGDA--DVAIGGGAESMS 121 (394)
T ss_pred HHHHHcCCC--CEEEEEeehhcc
Confidence 999999976 999999999876
No 58
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=3.8e-12 Score=117.72 Aligned_cols=107 Identities=17% Similarity=0.118 Sum_probs=83.0
Q ss_pred eccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCC--CchHHHHHHHHHhcCCCCeeeeecc
Q 023575 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS--KSIKTFLMQIFEKYGNTDIEGVDST 118 (280)
Q Consensus 41 ~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~--p~~a~~l~~~l~~~g~~~~~~~dv~ 118 (280)
.|+|...++...++++..+|+.+|+++||+++|++++|||.||+++ ++++.. +..+..+++.| |++..++++++
T Consensus 8 vG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~L---Gl~~~~~~~v~ 83 (386)
T PRK08313 8 LGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADAL---GATGKPLIRVH 83 (386)
T ss_pred EEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhc---CCCCCceEEEe
Confidence 4666544312235678999999999999999999999999999887 454321 12234554444 55567789999
Q ss_pred ccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc
Q 023575 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (280)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~ 153 (280)
++|+++..++..|..+|++|.+ ++||||++|..
T Consensus 84 ~~casg~~al~~A~~~I~sG~~--~~vLVvg~e~~ 116 (386)
T PRK08313 84 TAGSVGGSTAVVAASLVQSGVY--RRVLAVAWEKQ 116 (386)
T ss_pred ccCHHHHHHHHHHHHHHHCCCC--CEEEEEEEEEc
Confidence 9999999999999999999977 99999999864
No 59
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=4.1e-12 Score=117.84 Aligned_cols=97 Identities=14% Similarity=0.122 Sum_probs=82.7
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCC-eeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~-~~~~dv~~~C~g~~~aL~~A 131 (280)
+++..+|+.+|++++|+++ |++++|||.||+++++++...|...+.+... +.|.++ +++++++++|++++.|+..|
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~--~~Gl~~~~p~~~V~~aCaSg~~Al~~A 105 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGAL--LAGLPNSVGGVTVNRFCASGLQAVAMA 105 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHH--HcCCCCCCceeeecchhhHHHHHHHHH
Confidence 4788999999999999997 9999999999999888776555555553322 235553 88999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..+|++|.+ +.|||+++|..|
T Consensus 106 ~~~I~sG~~--d~vLv~G~E~mS 126 (399)
T PRK09052 106 ADRIRVGEA--DVMIAAGVESMS 126 (399)
T ss_pred HHHHHCCCC--CEEEEEEEeccc
Confidence 999999976 999999999886
No 60
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=4.5e-12 Score=117.89 Aligned_cols=96 Identities=18% Similarity=0.208 Sum_probs=84.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+++..+|+.+|+++||+++|++++|||.||++++++....|..+..++..+ |.+ ++++++++.+|++++.++.+|.
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~---Gl~~~~p~~~V~~~CaSg~~Al~~A~ 99 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDA---GLPVTVPGMQLDRRCGSGLQAVITAA 99 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHc---CCCCCCceeehhhhhhHHHHHHHHHH
Confidence 578999999999999999999999999999998887766676666555444 444 5789999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
++|++|.+ +.+||+++|..+
T Consensus 100 ~~I~sG~~--d~vLv~G~E~ms 119 (404)
T PRK06205 100 MQVQTGAA--DVVIAGGAESMS 119 (404)
T ss_pred HHHHcCCC--CEEEEeeehhhc
Confidence 99999976 999999999876
No 61
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=4.8e-12 Score=117.18 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCc-hHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~-~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~ 130 (280)
.+++..+|+.+|++++|+++|++|++||.||+++.+++...|+ .+..+...+ |++ ++++++++.+|++++.|+.+
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~l---Gl~~~~p~~~V~~aCaSg~~Al~~ 99 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRA---GLPVTVPGMTVNRFCSSGLQTIAL 99 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHc---CCCCCCceeeecchhhHHHHHHHH
Confidence 4677899999999999999999999999999999888766554 444443333 554 48899999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|..+|++|.+ +.+|+++.|.+|
T Consensus 100 A~~~I~sG~~--d~vlagGvE~ms 121 (392)
T PRK07108 100 AAQRVIAGEG--DVFVAGGVESIS 121 (392)
T ss_pred HHHHHHCCCC--CEEEEEEEeccC
Confidence 9999999976 999999999987
No 62
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=5.6e-12 Score=116.78 Aligned_cols=97 Identities=8% Similarity=0.064 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
.+++..+|+.+|++++|+++|++|+|||.||+++.++....+..+..+ ...+|.+ ++++++++.+|++++.|+..|
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~---~~~~Gl~~~~p~~~V~~~CaSg~~Al~~A 98 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQA---ARAAGIPWEVQTETVNKVCASGLRAVTLA 98 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHH---HHHcCCCCCcceeehhhhhhHHHHHHHHH
Confidence 367899999999999999999999999999999876521122233333 3344654 688999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..+|++|.+ +.+||+++|.++
T Consensus 99 ~~~I~sG~~--d~vLvvG~E~ms 119 (393)
T PRK08235 99 DQIIRAGDA--SVIVAGGMESMS 119 (393)
T ss_pred HHHHHCCCC--CEEEEEeeeccc
Confidence 999999976 999999999886
No 63
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.31 E-value=1.1e-11 Score=114.79 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCch-HHHHHHHHHhcCC-CCeeeeeccccCchHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI-KTFLMQIFEKYGN-TDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~-a~~l~~~l~~~g~-~~~~~~dv~~~C~g~~~aL~~ 130 (280)
.+.++.+|+.+|++++|+++|++|++||.||+++.++....+.. +......+ |+ .++++++++.+|+|++.|+.+
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~---Gl~~~~pa~~Vn~aCaSg~~Ai~~ 100 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAA---GLPETVPGVQINRFCASGLEAVNL 100 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHc---CCCCCCCeEEEcchhhhHHHHHHH
Confidence 35678999999999999999999999999999998875433332 22222233 54 358999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|.++|++|.+ +.+|++++|.+|
T Consensus 101 A~~~I~sG~~--d~vLv~G~E~mS 122 (402)
T PRK08242 101 AAAKVRSGWD--DLVIAGGVESMS 122 (402)
T ss_pred HHHHHHcCCC--CEEEEEEEEccC
Confidence 9999999976 999999999987
No 64
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.29 E-value=1.1e-11 Score=115.32 Aligned_cols=98 Identities=16% Similarity=0.149 Sum_probs=78.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCC-----CchHHHHHHHHHhcCCCCeeeeeccccCchH
Q 023575 50 FCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-----KSIKTFLMQIFEKYGNTDIEGVDSTNACYGG 124 (280)
Q Consensus 50 ~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~-----p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~ 124 (280)
+..++++..+|+.+|+++||+++|++++|||.+|++++++++.. +..... ..+ +....++++++++|+++
T Consensus 19 ~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~---~~~g~~~~~v~~~Casg 93 (403)
T PRK06289 19 WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHP---ALWGVPASRHEAACASG 93 (403)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--Hhh---cCCCCceeecccccHHH
Confidence 33357889999999999999999999999999999887665322 111111 122 22345789999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEecccc
Q 023575 125 TAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 125 ~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
+.+|.+|..+|++|.+ ++|||+++|+.+
T Consensus 94 ~~al~~Aa~~I~sG~~--~~VLvvg~e~~s 121 (403)
T PRK06289 94 SVATLAAMADLRAGRY--DVALVVGVELMK 121 (403)
T ss_pred HHHHHHHHHHHHcCCC--CEEEEEEEEecC
Confidence 9999999999999977 999999999754
No 65
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.29 E-value=1.6e-11 Score=113.82 Aligned_cols=97 Identities=10% Similarity=0.061 Sum_probs=81.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
.+.+.+|+.+|++++|++++++|++||.||+++.++++..+..+... ++..+|..++++++++++|++++.++.+|..
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~--~~~~lg~~~~p~~~V~~~Casg~~al~~A~~ 97 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQA--AMHAGGLQEAPAIGMNNLCGSGLRALALAMQ 97 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHH--HHHcCCCCCCcEEEecchhHHHHHHHHHHHH
Confidence 46689999999999999999999999999999887775434444321 3444565678999999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEecccc
Q 023575 134 WVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~s 154 (280)
+|++|.+ +.+||+++|..+
T Consensus 98 ~I~sG~~--~~vlv~g~e~~s 116 (393)
T cd00826 98 LIAGGDA--NCILAGGFEKME 116 (393)
T ss_pred HHHCCCC--CEEEEEeeeccc
Confidence 9999976 999999999875
No 66
>PRK06059 lipid-transfer protein; Provisional
Probab=99.28 E-value=2.2e-11 Score=113.20 Aligned_cols=96 Identities=16% Similarity=0.107 Sum_probs=79.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+++..+|+.+|+++||+++|++++|||.||+++..++.. .+..+..+++.+ |.+.+++++++++|++++.+|..|.
T Consensus 20 ~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~l---G~~~~~~~~v~~~Casg~~al~~A~ 96 (399)
T PRK06059 20 GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQAL---GWNGAPVSSSYAACASGSQALQSAR 96 (399)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHh---CCCCCceecccchhHHHHHHHHHHH
Confidence 467899999999999999999999999999876654422 234456666555 4455678999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+|++|.+ ++|||+++|..+
T Consensus 97 ~~I~sG~~--~~vLvvg~e~~s 116 (399)
T PRK06059 97 AQILAGLC--DVALVVGADTTP 116 (399)
T ss_pred HHHHCCCC--CEEEEEEEcccC
Confidence 99999976 999999999753
No 67
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.27 E-value=4.3e-11 Score=111.48 Aligned_cols=175 Identities=14% Similarity=0.094 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCC-cc----EEEEecccCC-----------------C----CC---CchHHHHHHHHHh
Q 023575 56 DVISMSLTVVTSLLEKYKIDPTQ-IG----RLEVGSETVI-----------------D----KS---KSIKTFLMQIFEK 106 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~~~~-Id----~li~~t~t~~-----------------~----~~---p~~a~~l~~~l~~ 106 (280)
....|+..|+++||+++|+++++ ++ .+++++..+. + .. ...+..+...++
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g- 149 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL- 149 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC-
Confidence 45689999999999999998765 33 2444443221 0 11 234444444444
Q ss_pred cCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc------cc--------------------CCCC
Q 023575 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------YA--------------------EGPA 160 (280)
Q Consensus 107 ~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s------~~--------------------~~~~ 160 (280)
+.+-+++.+..+|++++.||..|.++|++|.+ +.+||.++|... |. .+..
T Consensus 150 --l~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~ 225 (407)
T cd00828 150 --SSHGPIKTPVGACATALEALDLAVEAIRSGKA--DIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRD 225 (407)
T ss_pred --cCCCCCcCcccHHHHHHHHHHHHHHHHHcCCC--CEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCCC
Confidence 31235789999999999999999999999977 999999999753 10 0123
Q ss_pred CcccCCceEEEEECCCCCc-----eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhh
Q 023575 161 RPTGGAAAVAMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL 235 (280)
Q Consensus 161 ~~~fGDgAaA~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L 235 (280)
.+++||||+++||++.+.. .+.....+. +...... . ...+. + ......+++. +|
T Consensus 226 G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~-~~~~d~~--~---~~~~~-~--------~~~~~~a~~~------Al 284 (407)
T cd00828 226 GFVEAEGAGVLVLERAELALARGAPIYGRVAGT-ASTTDGA--G---RSVPA-G--------GKGIARAIRT------AL 284 (407)
T ss_pred cEEeecceEEEEEeeHHHHHHCCCeEEEEEEEE-EeccCCC--C---CCCCC-C--------hHHHHHHHHH------HH
Confidence 5678999999999975321 121111111 1100000 0 00000 1 1122223332 37
Q ss_pred hcCCCCccCccEEecCCCChH
Q 023575 236 EGRQFSMLDVDYFVFHSPYNK 256 (280)
Q Consensus 236 ~~~gl~~~dId~~v~Hq~n~~ 256 (280)
+++|++++|||++..|-.+.+
T Consensus 285 ~~Agi~~~dId~i~~hgtgt~ 305 (407)
T cd00828 285 AKAGLSLDDLDVISAHGTSTP 305 (407)
T ss_pred HHcCCCHHHcCEEecccccCc
Confidence 889999999999999955543
No 68
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.27 E-value=7.5e-11 Score=109.77 Aligned_cols=222 Identities=14% Similarity=0.139 Sum_probs=128.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhh--CCC---C-Ceee-ec----c-Cc----eeeecCCC-----CCCHHHHHHHHHH
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT-VG----L-GQ----DCMAFCSE-----VEDVISMSLTVVT 66 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~--g~~---~-~~~~-~~----i-g~----r~~~~~~~-----~e~~~~la~~Aa~ 66 (280)
.+.|.|+|...|--. +.+++.+.+ |.+ + ..+. .. + +. ....+.++ -.....|+.+|++
T Consensus 2 ~v~ItG~g~~~p~g~-~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (407)
T TIGR03150 2 RVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred cEEEEcceEECCCcC-CHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 588999999999763 777776642 221 0 1110 00 0 00 00000000 0124689999999
Q ss_pred HHHHHcCCCCCCccE----EEEecccCCC---------------------CCC----c-hHHHHHHHHHhcCCCCeeeee
Q 023575 67 SLLEKYKIDPTQIGR----LEVGSETVID---------------------KSK----S-IKTFLMQIFEKYGNTDIEGVD 116 (280)
Q Consensus 67 ~aL~~agi~~~~Id~----li~~t~t~~~---------------------~~p----~-~a~~l~~~l~~~g~~~~~~~d 116 (280)
+||+++|+++++||. +++++..+.. ..+ . .+.++...+ |++ -+++.
T Consensus 81 ~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~---gl~-g~~~~ 156 (407)
T TIGR03150 81 EAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY---GAK-GPNHA 156 (407)
T ss_pred HHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh---CCC-Ccccc
Confidence 999999999999886 6666543211 001 1 223344444 332 35678
Q ss_pred ccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc----------------ccC-----------CCCCcccCCceE
Q 023575 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----------------YAE-----------GPARPTGGAAAV 169 (280)
Q Consensus 117 v~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s----------------~~~-----------~~~~~~fGDgAa 169 (280)
+..+|++++.||..|..+|++|.+ +.+||++.|... +.+ .....++||||+
T Consensus 157 v~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAa 234 (407)
T TIGR03150 157 VVTACATGTHAIGDAFRLIQRGDA--DVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAG 234 (407)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCC--CEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEE
Confidence 888999999999999999999976 999999998621 000 012467899999
Q ss_pred EEEECCCCCc-----eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccC
Q 023575 170 AMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (280)
Q Consensus 170 A~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~d 244 (280)
|+||++.+.. .+.....+ ++...+.. .. ..|...+ .....+++ ++|+++|++++|
T Consensus 235 alvL~~~~~A~~~g~~i~a~i~g-~~~~~d~~-~~----~~~~~~~--------~~~~~ai~------~Al~~Agi~~~d 294 (407)
T TIGR03150 235 VLVLEELEHAKARGAKIYAEIVG-YGMSGDAY-HI----TAPAPEG--------EGAARAMR------AALKDAGINPED 294 (407)
T ss_pred EEEEeeHHHHHHCCCeEEEEEEE-EEECCCCC-CC----CCCCCCc--------HHHHHHHH------HHHHHcCCCHhH
Confidence 9999975421 11111111 11110000 00 0011011 11222233 248889999999
Q ss_pred ccEEecCCCChH
Q 023575 245 VDYFVFHSPYNK 256 (280)
Q Consensus 245 Id~~v~Hq~n~~ 256 (280)
||++.+|-.+..
T Consensus 295 Id~ve~h~tgt~ 306 (407)
T TIGR03150 295 VDYINAHGTSTP 306 (407)
T ss_pred CCEEeCcCCCCC
Confidence 999999976653
No 69
>PRK05790 putative acyltransferase; Provisional
Probab=99.25 E-value=2.7e-11 Score=112.38 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=78.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+++..+|+.+|+++||+++|++++|||.||+++.++....+..+..++.. .|++ .+++++++.+|++++.+|.+|.
T Consensus 23 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~---~gl~~~~~~~~v~~~Casg~~al~~A~ 99 (393)
T PRK05790 23 DVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALK---AGLPVEVPALTINKVCGSGLKAVALAA 99 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHH---cCCCCCCceeeecccchHHHHHHHHHH
Confidence 57899999999999999999999999999998876543223333222222 3554 4789999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+|++|.+ +.|||+++|..+
T Consensus 100 ~~I~sG~~--d~vLv~G~e~~s 119 (393)
T PRK05790 100 QAIRAGDA--DIVVAGGQESMS 119 (393)
T ss_pred HHHHcCCC--CEEEEEeeeccc
Confidence 99999976 999999999865
No 70
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=4e-11 Score=111.32 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=80.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+.+..+|+.+|++++|+++|++|+|||.||+++..++.. +.....+..++. |.+ .+++++++.+|++++.|+..|.
T Consensus 28 ~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~--~~~~~~~~~l~a-g~~~~~p~~~V~~aCaSG~~Av~~A~ 104 (397)
T PRK06954 28 SLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ--GQAPARQAALGA-GLPLSVGCTTVNKMCGSGMRAAMFAH 104 (397)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc--chHHHHHHHHcC-CCCCCccEeeccccchHHHHHHHHHH
Confidence 567899999999999999999999999999998776543 233333334543 555 4889999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+|++|.+ +.+|++++|..+
T Consensus 105 ~~I~sG~~--d~vLv~G~E~ms 124 (397)
T PRK06954 105 DMLVAGSV--DVIVAGGMESMT 124 (397)
T ss_pred HHHHCCCC--CEEEEEeeeccC
Confidence 99999976 999999999886
No 71
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=3.6e-11 Score=112.58 Aligned_cols=96 Identities=11% Similarity=0.140 Sum_probs=80.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+.+..+|+.+|+++||+++|++++|||.||+++.++....+..+..++..+ |++ ++++++++.+|++++.++..|.
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~l---Gl~~~~p~~~v~~~CaSg~~al~~A~ 100 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRL---GCGEKVPAWTVQRNCASGMQALDSAA 100 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHh---CcCCCceeeeccchhhHHHHHHHHHH
Confidence 357899999999999999999999999999987664433345555544444 553 5789999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+|++|.+ +++||+++|..+
T Consensus 101 ~~I~sG~~--d~vLv~G~E~ms 120 (426)
T PRK08170 101 ANIALGRA--DLVLAGGVEAMS 120 (426)
T ss_pred HHHHCCCC--CEEEEEEEeccc
Confidence 99999976 999999999865
No 72
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.23 E-value=1.4e-10 Score=108.21 Aligned_cols=173 Identities=18% Similarity=0.129 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHcCCC---CCCccEEEEecc---------------cCCCCCCc---------hHHHHHHHHHhcCC
Q 023575 57 VISMSLTVVTSLLEKYKID---PTQIGRLEVGSE---------------TVIDKSKS---------IKTFLMQIFEKYGN 109 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~---~~~Id~li~~t~---------------t~~~~~p~---------~a~~l~~~l~~~g~ 109 (280)
...|+..|+++||+++|++ +++|+.++.++. .+.+..|. .+..+...+ |+
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l---gl 156 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQF---GI 156 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHh---CC
Confidence 4679999999999999986 467777664432 11211221 223333344 44
Q ss_pred CCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c----------------------cCCCC
Q 023575 110 TDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y----------------------AEGPA 160 (280)
Q Consensus 110 ~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~----------------------~~~~~ 160 (280)
+ -+++.++.+|++++.||..|.++|++|.+ +.+||+++|.. + + +.+..
T Consensus 157 ~-G~~~tv~~acas~~~Al~~A~~~I~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~d 233 (410)
T PRK07103 157 R-GEGFTVGGASASGQLAVIQAARLVQSGSV--DACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRD 233 (410)
T ss_pred C-CCcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCC
Confidence 3 35788999999999999999999999976 99999888631 1 0 00113
Q ss_pred CcccCCceEEEEECCCCCc-----eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhh
Q 023575 161 RPTGGAAAVAMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL 235 (280)
Q Consensus 161 ~~~fGDgAaA~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L 235 (280)
..++||||+|+||++.+.. .+.....+. +...+....+ .|. .. ....+++ ++|
T Consensus 234 G~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~-~~~~d~~~~~-----~p~------~~----~~~~a~~------~Al 291 (410)
T PRK07103 234 GFIYGEACGAVVLESAESARRRGARPYAKLLGW-SMRLDANRGP-----DPS------LE----GEMRVIR------AAL 291 (410)
T ss_pred CeeEeeeEEEEEEccHHHHHHCCCceEEEEEEE-EEecCCCCCC-----CCC------HH----HHHHHHH------HHH
Confidence 4688999999999975321 111111111 1100000000 010 01 1122233 247
Q ss_pred hcCCCCccCccEEecCCCChHH
Q 023575 236 EGRQFSMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 236 ~~~gl~~~dId~~v~Hq~n~~~ 257 (280)
+++|++++|||++..|-.+.+.
T Consensus 292 ~~Agi~~~dId~v~~hgtgt~~ 313 (410)
T PRK07103 292 RRAGLGPEDIDYVNPHGTGSPL 313 (410)
T ss_pred HHcCCCHHHCCEEEccCCCCCC
Confidence 8899999999999999766554
No 73
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=7.2e-11 Score=109.24 Aligned_cols=107 Identities=12% Similarity=0.037 Sum_probs=83.5
Q ss_pred eeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCC--CCchHHHHHHHHHhcCCCCeeeee
Q 023575 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVD 116 (280)
Q Consensus 39 ~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~--~p~~a~~l~~~l~~~g~~~~~~~d 116 (280)
...|+|...+.. .++++..+|+.+|++++|+++|++++|||.+|+++ +++.. .+..+..+++.++ ..+.++++
T Consensus 12 aIvG~g~t~~~~-~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~-~~~~~~~~~~~a~~l~~~lG---~~~~~~~~ 86 (392)
T PRK06065 12 AVIGAGLTLFRR-RLLETPQELAWEAASKALDEAGLELKDIDCVVIGS-APDAFDGVHMKGEYLSHGSG---GIRKPVSR 86 (392)
T ss_pred EEEEecccCCcC-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cCCcccccccHHHHHHHHcC---CCCCCeEE
Confidence 345666554322 24678899999999999999999999999999876 33322 3445655555554 33467889
Q ss_pred ccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Q 023575 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (280)
Q Consensus 117 v~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~ 152 (280)
+.++|+++..+|.+|..+|++|.+ ++||||++|+
T Consensus 87 V~~~gasG~~al~~A~~~I~sG~a--d~vLVvg~e~ 120 (392)
T PRK06065 87 VYVGGATGVMTAIAGWYHVASGLC--QKVLAVAEEK 120 (392)
T ss_pred EecCchhHHHHHHHHHHHHhCCCC--CEEEEEEeec
Confidence 999999999999999999999987 9999999986
No 74
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=1.1e-10 Score=108.13 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=76.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCC--CchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS--KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~--p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~ 130 (280)
.+++..+|+.+|+++||+++|++++|||.|++++..+.... +..+..+.. .+|.+..++++++++|++++.+|.+
T Consensus 18 ~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~---~~gl~~~p~~~v~~~CaSg~~Al~~ 94 (389)
T PRK07516 18 DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQA---DPALRFKPATRVENACATGSAAVYA 94 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHH---hcCCCCCceeeeccccHHHHHHHHH
Confidence 45788999999999999999999999999999876433211 111111111 2244567899999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|..+|++|.+ +++||+++|..+
T Consensus 95 A~~~I~sG~~--d~vLvvg~e~~s 116 (389)
T PRK07516 95 ALDAIEAGRA--RIVLVVGAEKMT 116 (389)
T ss_pred HHHHHHCCCC--CEEEEEEehhhc
Confidence 9999999977 999999999864
No 75
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=6.4e-11 Score=109.90 Aligned_cols=98 Identities=9% Similarity=0.067 Sum_probs=79.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
+.+..+|+.+|+++||+++|++|+|||.+|+++..+++..|.........+..++ .++++++++.+|++++.++.+|.+
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~-~~~p~~~V~~~CaSg~~ai~~A~~ 107 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP-YNIPAMAVDRQCASSLTTVSIGAM 107 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC-CCCcchhhhhhhHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988775432322222112333334 358899999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEecccc
Q 023575 134 WVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~s 154 (280)
+|++|.+ +.+||++.|..+
T Consensus 108 ~I~sG~~--d~vLv~G~e~ms 126 (394)
T PRK06445 108 EIATGMA--DIVIAGGVEHMT 126 (394)
T ss_pred HHHcCCC--CEEEEeeecccc
Confidence 9999977 999999999765
No 76
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.17 E-value=1.7e-09 Score=101.37 Aligned_cols=175 Identities=15% Similarity=0.098 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCc-c----EEEEecccCCC---------------------CCCc-----hHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQI-G----RLEVGSETVID---------------------KSKS-----IKTFLMQIFE 105 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~I-d----~li~~t~t~~~---------------------~~p~-----~a~~l~~~l~ 105 (280)
...|+..|++++|+++|++++++ + .+++++..+.. ..|. .+.++...+
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~- 160 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY- 160 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh-
Confidence 45789999999999999988776 2 45555543221 0111 123333333
Q ss_pred hcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------c----------cC-----------
Q 023575 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y----------AE----------- 157 (280)
Q Consensus 106 ~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~----------~~----------- 157 (280)
|++ -+++-+..+|++++.||..|..+|++|.+ +.+||.++|... + ..
T Consensus 161 --gl~-Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~ 235 (424)
T PRK06333 161 --GFK-GPLGAPVTACAAGVQAIGDAARLIRSGEA--DVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR 235 (424)
T ss_pred --CCC-CCCccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC
Confidence 432 35678889999999999999999999977 999999999731 0 00
Q ss_pred CCCCcccCCceEEEEECCCCC-----ceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHH
Q 023575 158 GPARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKF 232 (280)
Q Consensus 158 ~~~~~~fGDgAaA~ll~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 232 (280)
....++.||||+++||++.+. ..+...+.+ ++...+..... .+..++ .....+++.
T Consensus 236 ~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G-~~~~~d~~~~~-----~~~~~~--------~~~~~a~~~----- 296 (424)
T PRK06333 236 DRDGFVMGEGAGILVIETLEHALARGAPPLAELVG-YGTSADAYHMT-----AGPEDG--------EGARRAMLI----- 296 (424)
T ss_pred CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEE-EEEcCCCCCCC-----CCCCCc--------HHHHHHHHH-----
Confidence 013467899999999987431 111111111 11100000000 011111 122223332
Q ss_pred HhhhcCCCCccCccEEecCCCChHH
Q 023575 233 EKLEGRQFSMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq~n~~~ 257 (280)
+|+++|++++|||++-.|-.+...
T Consensus 297 -Al~~Agi~p~dId~i~~hgtgt~~ 320 (424)
T PRK06333 297 -ALRQAGIPPEEVQHLNAHATSTPV 320 (424)
T ss_pred -HHHHcCCCHHHCCEEeccCCCCcc
Confidence 378899999999999999666543
No 77
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.14 E-value=7e-10 Score=103.52 Aligned_cols=225 Identities=13% Similarity=0.095 Sum_probs=131.0
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCCC----Ceee-e--------cc---CceeeecCC----CCCCHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVSK----GKYT-V--------GL---GQDCMAFCS----EVEDVISMSLTV 64 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~~----~~~~-~--------~i---g~r~~~~~~----~~e~~~~la~~A 64 (280)
+.|.|.|+|...|-- .+.+++.+.+ |.+. .++. . .+ .... .+.. .-.....|+..|
T Consensus 2 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~-~~~~~~~~~~~~~~~l~~~a 79 (411)
T PRK07314 2 RRVVVTGLGAVSPLG-NDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDD-YMSRKEARRMDRFIQYGIAA 79 (411)
T ss_pred CcEEEEcceEECCCc-CCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhh-cCCHHHhhcCCHHHHHHHHH
Confidence 468999999999976 4777776542 2210 0110 0 00 0000 0110 001246799999
Q ss_pred HHHHHHHcCCCCCCcc----EEEEecccCC---------------------CCCC----c-hHHHHHHHHHhcCCCCeee
Q 023575 65 VTSLLEKYKIDPTQIG----RLEVGSETVI---------------------DKSK----S-IKTFLMQIFEKYGNTDIEG 114 (280)
Q Consensus 65 a~~aL~~agi~~~~Id----~li~~t~t~~---------------------~~~p----~-~a~~l~~~l~~~g~~~~~~ 114 (280)
+++||+++|++++++| .+++++..+. +..| . .+.++...++ ++ -++
T Consensus 80 a~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g---l~-Gp~ 155 (411)
T PRK07314 80 AKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG---AK-GPN 155 (411)
T ss_pred HHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC---CC-Ccc
Confidence 9999999999999888 4666654321 0111 1 2334444444 32 246
Q ss_pred eeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------cc-----------C---------CCCCcccCCc
Q 023575 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------YA-----------E---------GPARPTGGAA 167 (280)
Q Consensus 115 ~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~~-----------~---------~~~~~~fGDg 167 (280)
+-+..+|++++.||..|..+|++|.+ +.+||.+.|... +. + .....++|||
T Consensus 156 ~tv~~acaSgl~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geG 233 (411)
T PRK07314 156 HSIVTACATGAHAIGDAARLIAYGDA--DVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEG 233 (411)
T ss_pred ccchhhhHHHHHHHHHHHHHHhcCCC--CEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEce
Confidence 77788999999999999999999976 999999988631 10 0 0134678999
Q ss_pred eEEEEECCCCC-----ceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 023575 168 AVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM 242 (280)
Q Consensus 168 AaA~ll~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~ 242 (280)
|+|+||++.+. ..+.....+. +...+.. .. ..|...+ .....+++ ++|+++|+++
T Consensus 234 AaavvL~~~~~A~~~g~~~~a~I~g~-~~~~d~~-~~----~~~~~~~--------~~~~~a~~------~Al~~agi~~ 293 (411)
T PRK07314 234 AGILVLEELEHAKARGAKIYAEVVGY-GMTGDAY-HM----TAPAPDG--------EGAARAMK------LALKDAGINP 293 (411)
T ss_pred EEEEEEeeHHHHHHCCCeEEEEEEEE-EEcCCCC-CC----CCCCCCc--------HHHHHHHH------HHHHHcCCCH
Confidence 99999997532 1111111111 1100000 00 0011111 01112222 2488999999
Q ss_pred cCccEEecCCCChHHHH
Q 023575 243 LDVDYFVFHSPYNKLVQ 259 (280)
Q Consensus 243 ~dId~~v~Hq~n~~~~~ 259 (280)
+|||++-.|-.+.+..+
T Consensus 294 ~dId~v~~hgtgt~~~d 310 (411)
T PRK07314 294 EDIDYINAHGTSTPAGD 310 (411)
T ss_pred HHCCEEEccccCCcccc
Confidence 99999999977665544
No 78
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.13 E-value=2.6e-10 Score=100.18 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=78.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCC-CCeeeeeccccCchHHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~-~~~~~~dv~~~C~g~~~aL~~A 131 (280)
.+.+..+|+.+|++.+|++++++|++||.|++++..+....+..+..+... .|+ ..++++.++.+|++++.|+..|
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~---aGl~~~vp~~~V~~~CaSG~~Av~~a 98 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALA---AGLPESVPATTVNRACASGLQAVHLA 98 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHH---TTS-TTSEEEEEE-GGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhh---cccccccceeeehhhhhHHHHHHHHh
Confidence 456899999999999999999999999999999987765544444433333 344 3689999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
...|++|.+ +.+|+++.|.+|
T Consensus 99 ~~~I~sG~~--dvvlagGvE~mS 119 (264)
T PF00108_consen 99 AMAIASGEA--DVVLAGGVESMS 119 (264)
T ss_dssp HHHHHTTS---SEEEEEEEEETT
T ss_pred hhhhcCCCc--cEEEEecccccc
Confidence 999999976 999999999997
No 79
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.13 E-value=3.4e-10 Score=106.41 Aligned_cols=98 Identities=13% Similarity=0.194 Sum_probs=80.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
.+.+..+|+.+|++++|+++|++++|||.||+++.++....+.....+ ....+|++ .+++++++.+|++++.++..|
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~--~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~A 144 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRM--AAFYAGFPETVPVRTVNRQCSSGLQAVADV 144 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHH--HHHHCCCCCCcceEEEeccCchHHHHHHHH
Confidence 367899999999999999999999999999998776654444433321 22233554 478999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
...|++|.+ +.|||++.|.++
T Consensus 145 a~~I~sG~~--dvvLv~GvE~mS 165 (452)
T PLN02287 145 AAAIKAGFY--DIGIGAGVESMT 165 (452)
T ss_pred HHHHHcCCC--CeEEEEeEEecC
Confidence 999999976 999999999876
No 80
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.09 E-value=6.4e-09 Score=96.04 Aligned_cols=223 Identities=14% Similarity=0.135 Sum_probs=125.6
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhh--CCCC----Ceee--eccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCC-
Q 023575 6 PKNVGILALDIYFPPTCVLQEALEVHD--GVSK----GKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDP- 76 (280)
Q Consensus 6 ~~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~~----~~~~--~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~- 76 (280)
++.|.|.|+|...|--. .+++.+.+ |.+. ..+. .....+. +.........++..|+++||+++|+++
T Consensus 1 ~~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~Al~dagl~~~ 76 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGL--IGNQPSSLEDLTKTVVTAALKDAGLTPP 76 (381)
T ss_pred CCeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCccccccccccee--eccccccccHHHHHHHHHHHHhcCCCCC
Confidence 35799999999999886 66665542 2210 1110 0000000 000001233467789999999999964
Q ss_pred -CCccEEEEecccCC--------------------C--------CCCc-hHHHHHHHHHhcCCCCeeeeeccccCchHHH
Q 023575 77 -TQIGRLEVGSETVI--------------------D--------KSKS-IKTFLMQIFEKYGNTDIEGVDSTNACYGGTA 126 (280)
Q Consensus 77 -~~Id~li~~t~t~~--------------------~--------~~p~-~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~ 126 (280)
+++.. +++|..+. + ..|. .+..+...++..| +.+-+..+|++++.
T Consensus 77 ~~~~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G----p~~ti~~aCasg~~ 151 (381)
T PRK05952 77 LTDCGV-VIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG----PVLAPMAACATGLW 151 (381)
T ss_pred CCCEEE-EEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC----ccccccchhHHHHH
Confidence 45544 44443221 0 0111 2333444443322 56788999999999
Q ss_pred HHHHHHHHHHhcCCCCCeEEEEEecc-cc------cc--------------CCCCCcccCCceEEEEECCCCC-----ce
Q 023575 127 ALFNCVNWVESASWDGRYGLVVCTDS-AV------YA--------------EGPARPTGGAAAVAMLIGPDAP-----IA 180 (280)
Q Consensus 127 aL~~A~~~l~~g~~~~~~vLvv~~e~-~s------~~--------------~~~~~~~fGDgAaA~ll~~~~~-----~~ 180 (280)
||..|.++|+.|.+ +.+||.++|. .+ +. .+...+++||||+++||++.+. ..
T Consensus 152 Ai~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~ 229 (381)
T PRK05952 152 AIAQGVELIQTGQC--QRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAK 229 (381)
T ss_pred HHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCc
Confidence 99999999999976 9999999985 22 10 0123568999999999997532 11
Q ss_pred eeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCCCChHHHH
Q 023575 181 FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQ 259 (280)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~~~ 259 (280)
+.....+ ++...+..... .|..++ .....+++. +|+++|++++|||++-.|-.+.+..+
T Consensus 230 i~a~I~g-~~~~~d~~~~~-----~~~~~~--------~~~~~ai~~------Al~~agi~p~dId~i~~hgtgt~~~D 288 (381)
T PRK05952 230 IYGQILG-FGLTCDAYHMS-----APEPDG--------KSAIAAIQQ------CLARSGLTPEDIDYIHAHGTATRLND 288 (381)
T ss_pred eEEEEEE-EEecCCCCCCC-----CCCCCH--------HHHHHHHHH------HHHHhCCCHHHeeEEEccCCCCCCCc
Confidence 1111111 11100000000 011111 122223332 38889999999999999976655443
No 81
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.07 E-value=3.4e-09 Score=98.80 Aligned_cols=164 Identities=16% Similarity=0.149 Sum_probs=103.6
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC----CCee-----eecc-Cc----eeeecCCC-----CCCHHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS----KGKY-----TVGL-GQ----DCMAFCSE-----VEDVISMSLTVV 65 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~----~~~~-----~~~i-g~----r~~~~~~~-----~e~~~~la~~Aa 65 (280)
+.+.|.|+|...|--. +.+++.+.+ |.+ .+++ ...+ +. ....+.++ -.....|+..|+
T Consensus 2 ~~v~ItG~g~vsp~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa 80 (406)
T PRK08439 2 KRVVVTGIGMINSLGL-NKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAA 80 (406)
T ss_pred CCEEEEeeEEECCCcC-CHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHH
Confidence 4689999999999874 666666542 221 0111 1000 00 00000011 112467999999
Q ss_pred HHHHHHcCCCCCCccE----EEEecccCC-------------------------CCCC-chHHHHHHHHHhcCCCCeeee
Q 023575 66 TSLLEKYKIDPTQIGR----LEVGSETVI-------------------------DKSK-SIKTFLMQIFEKYGNTDIEGV 115 (280)
Q Consensus 66 ~~aL~~agi~~~~Id~----li~~t~t~~-------------------------~~~p-~~a~~l~~~l~~~g~~~~~~~ 115 (280)
++||+++|+++++++. +++++..+. ...| ..+..+...++. + -+++
T Consensus 81 ~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl---~-Gp~~ 156 (406)
T PRK08439 81 REAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL---K-GPNL 156 (406)
T ss_pred HHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC---C-CCcc
Confidence 9999999999877763 444443211 0111 244445555543 3 2467
Q ss_pred eccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c------c--------------CCCCCcccCCce
Q 023575 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y------A--------------EGPARPTGGAAA 168 (280)
Q Consensus 116 dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~------~--------------~~~~~~~fGDgA 168 (280)
.+..+|++++.||..|.++|++|.+ +.+||+++|.. + + . .....+++|+||
T Consensus 157 ~~~~acas~~~Al~~A~~~i~~G~~--d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 234 (406)
T PRK08439 157 SSVTACAAGTHAIIEAVKTIMLGGA--DKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGA 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCce
Confidence 8889999999999999999999976 99999999862 1 1 0 011346789999
Q ss_pred EEEEECCCC
Q 023575 169 VAMLIGPDA 177 (280)
Q Consensus 169 aA~ll~~~~ 177 (280)
+++||++.+
T Consensus 235 ~~lvLe~~~ 243 (406)
T PRK08439 235 GALVLEEYE 243 (406)
T ss_pred EEEEEccHH
Confidence 999999753
No 82
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=6.6e-10 Score=102.90 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
+.+..+|+.+|++++|+++|+.+++||.+|+++..++.. .+..+.+++..+ |.+ .++++.++++|++++.|+..|
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~l---Gl~~~~p~~~V~~aCaSG~~Al~~A 100 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALA---GLPYTVPAITINRYCSSGLQSIAYG 100 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHc---CCCCCcceeehhhhhhHHHHHHHHH
Confidence 346899999999999999998889999999997665533 245554444444 555 488999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..+|++|.+ +.+||++.|.++
T Consensus 101 ~~~I~sG~~--d~vLv~G~E~ms 121 (391)
T PRK07661 101 AERIMLGHS--EAVIAGGAESMS 121 (391)
T ss_pred HHHHHcCCC--CEEEEEEEeecc
Confidence 999999976 999999999876
No 83
>PRK08256 lipid-transfer protein; Provisional
Probab=99.04 E-value=1.2e-09 Score=101.26 Aligned_cols=93 Identities=22% Similarity=0.148 Sum_probs=75.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
+.+..+|+.+|+++||+++|++++|||.+++++..++.. .. .. .+..+|++.+++++++.+|++++.++..|.+
T Consensus 19 ~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-~~--~~---~~~~lGl~~~~~~~v~~~caSg~~ai~~A~~ 92 (391)
T PRK08256 19 SWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-SG--QR---ALYEVGMTGIPIVNVNNNCSTGSTALFLARQ 92 (391)
T ss_pred CCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-hh--HH---HHHHcCCCCCCCcccccccHHHHHHHHHHHH
Confidence 467899999999999999999999999999876655432 11 11 2334455556788999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEecccc
Q 023575 134 WVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~s 154 (280)
+|++|.+ +.|||++.|..+
T Consensus 93 ~I~sG~~--d~vLv~g~e~~s 111 (391)
T PRK08256 93 AVRSGAA--DCALALGFEQMQ 111 (391)
T ss_pred HHHCCCC--CEEEEEEEeecc
Confidence 9999977 999999988653
No 84
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.03 E-value=7.3e-09 Score=97.49 Aligned_cols=115 Identities=10% Similarity=0.054 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-----CccEEEEecccCCC-----------------C--------CC-chHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPT-----QIGRLEVGSETVID-----------------K--------SK-SIKTFLMQIFE 105 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~-----~Id~li~~t~t~~~-----------------~--------~p-~~a~~l~~~l~ 105 (280)
...|+..|+.+||+++|+++. +...++++|+.+.. . .+ ..+.++...++
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998542 45567777643221 0 01 12333444443
Q ss_pred hcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------c----------c-----------C
Q 023575 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y----------A-----------E 157 (280)
Q Consensus 106 ~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~----------~-----------~ 157 (280)
++ -+++-+.++|++++.||..|..+|++|.+ +.+||.+.|... + . .
T Consensus 173 ---l~-Gp~~tv~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~ 246 (437)
T PLN02836 173 ---FQ-GPNHAAVTACATGAHSIGDAFRMIQFGDA--DVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC 246 (437)
T ss_pred ---CC-CceeceeChhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc
Confidence 33 35788899999999999999999999976 899998887521 0 0 0
Q ss_pred CCCCcccCCceEEEEECCCC
Q 023575 158 GPARPTGGAAAVAMLIGPDA 177 (280)
Q Consensus 158 ~~~~~~fGDgAaA~ll~~~~ 177 (280)
....+++||||+++||++.+
T Consensus 247 ~~~G~~~gEGaaalVLe~~~ 266 (437)
T PLN02836 247 DRDGFVIGEGAGVLVLEELE 266 (437)
T ss_pred CCCCeeeecCEEEEEEeeHH
Confidence 11356789999999999753
No 85
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1.7e-08 Score=93.11 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=70.9
Q ss_pred eccCceeeecCCCCCCHHHHHHHHHHHHHHHcC-CCC-CCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc
Q 023575 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYK-IDP-TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (280)
Q Consensus 41 ~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~ag-i~~-~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~ 118 (280)
.|+|...+....++.+..+|+.+|+++||+++| +++ +|||.+++++.............+.+.+++.+ .+.+.+
T Consensus 9 vG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~---~~~~~v- 84 (385)
T PRK06066 9 VGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM---RPTMTV- 84 (385)
T ss_pred EEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC---CCeEEE-
Confidence 566655432112467889999999999999999 997 79999987532111001111222334444321 233334
Q ss_pred ccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Q 023575 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (280)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~ 152 (280)
|+++..++..|...|++|.+ +.|||++.|+
T Consensus 85 --~~sg~~a~~~A~~aV~sG~~--d~vLv~g~~~ 114 (385)
T PRK06066 85 --AGDGLQGLAHAVMHINSGLA--NVVVVEAHSK 114 (385)
T ss_pred --eCcHHHHHHHHHHHHHcCCC--CEEEEEEEee
Confidence 88999999999999999987 9999999874
No 86
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=6.9e-09 Score=96.94 Aligned_cols=164 Identities=13% Similarity=0.072 Sum_probs=101.6
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC---C-Ce-----eeeccC-ce-e---eecCCCC-----CCHHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GK-----YTVGLG-QD-C---MAFCSEV-----EDVISMSLTVV 65 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~---~-~~-----~~~~ig-~r-~---~~~~~~~-----e~~~~la~~Aa 65 (280)
+.|.|.|+|...|-- .+.+++.+.+ |.+ + ++ +...++ .- . ..+..+. .....++..|+
T Consensus 4 ~~VvItG~g~~~p~g-~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVG-NTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 479999999999987 4777776542 221 1 11 110000 00 0 0000000 11346888999
Q ss_pred HHHHHHcCCCCCCcc----EEEEecccCCC-------------------------CCC-chHHHHHHHHHhcCCCCeeee
Q 023575 66 TSLLEKYKIDPTQIG----RLEVGSETVID-------------------------KSK-SIKTFLMQIFEKYGNTDIEGV 115 (280)
Q Consensus 66 ~~aL~~agi~~~~Id----~li~~t~t~~~-------------------------~~p-~~a~~l~~~l~~~g~~~~~~~ 115 (280)
++||+++|+++.+.+ .|+++|..+.+ ..| ..+.++...+++.| +.+
T Consensus 83 ~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~G----p~~ 158 (414)
T PRK08722 83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRG----PNI 158 (414)
T ss_pred HHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCC----Ccc
Confidence 999999999765433 35555543211 011 13444444444332 467
Q ss_pred eccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------c------c-----C----C-----CCCcccCCce
Q 023575 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y------A-----E----G-----PARPTGGAAA 168 (280)
Q Consensus 116 dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~------~-----~----~-----~~~~~fGDgA 168 (280)
-++.+|++++.||..|.++|+.|.+ +.+||.++|... | . + + ...++.|||+
T Consensus 159 ti~~aCas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGa 236 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDA--DAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGA 236 (414)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceE
Confidence 8899999999999999999999977 999999998732 1 0 0 0 1346789999
Q ss_pred EEEEECCCC
Q 023575 169 VAMLIGPDA 177 (280)
Q Consensus 169 aA~ll~~~~ 177 (280)
+++||++.+
T Consensus 237 aalvLe~~~ 245 (414)
T PRK08722 237 GMMVLEEYE 245 (414)
T ss_pred EEEEEccHH
Confidence 999999753
No 87
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1.4e-09 Score=101.22 Aligned_cols=96 Identities=13% Similarity=0.143 Sum_probs=77.5
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A 131 (280)
+.+..+|+.+|+++||+++ |++++|||.+|+++..+... .+..+..+... +|+++++++.++.+|+++..++..|
T Consensus 24 ~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~---lGl~~~p~~~v~~~caSG~~av~~A 100 (406)
T PRK07851 24 DMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVL---LGYDFLPGTTVNRYCSSSLQTTRMA 100 (406)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHH---cCCCCCCeeeeeccchhHHHHHHHH
Confidence 4678999999999999996 99999999999875433211 23444444444 4555578889999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
...|++|.+ +.|||++.|..+
T Consensus 101 a~~I~sG~~--d~vLv~G~e~~s 121 (406)
T PRK07851 101 FHAIKAGEG--DVFISAGVETVS 121 (406)
T ss_pred HHHHHCCCC--CEEEEeeEEecc
Confidence 999999977 999999999865
No 88
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.02 E-value=8.4e-09 Score=95.76 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=84.6
Q ss_pred chHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc------c-------------
Q 023575 95 SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------Y------------- 155 (280)
Q Consensus 95 ~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s------~------------- 155 (280)
..+.+++..+++ + -+++.+..+|++++.||..|..+|++|.+ +.+||+++|..+ +
T Consensus 138 ~~a~~ia~~lgl---~-Gp~~~i~~acas~~~Al~~A~~~I~~G~~--d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~P 211 (392)
T PRK09185 138 SLADFLRAYLGL---S-GPAYTISTACSSSAKVFASARRLLEAGLC--DAAIVGGVDSLCRLTLNGFNSLESLSPQPCRP 211 (392)
T ss_pred HHHHHHHHHhCC---C-CCcccccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeccccChHHHHHHHhccccCCCccCC
Confidence 355666666554 3 25788999999999999999999999977 999999998532 0
Q ss_pred -cCCCCCcccCCceEEEEECCCCCc--eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHH
Q 023575 156 -AEGPARPTGGAAAVAMLIGPDAPI--AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKF 232 (280)
Q Consensus 156 -~~~~~~~~fGDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 232 (280)
..+....++|||++++||++.... .+...-..++.. .... +..++ .....+++
T Consensus 212 fd~~~~G~~~gEGaa~vVLe~~~~~~~~I~g~g~~~d~~---~~~~-------~~~~~--------~~~~~a~~------ 267 (392)
T PRK09185 212 FSANRDGINIGEAAAFFLLEREDDAAVALLGVGESSDAH---HMSA-------PHPEG--------LGAILAMQ------ 267 (392)
T ss_pred CcCCCCccceeceEEEEEEEEcCCCcEEEEEEEEeCCCC---CCCC-------CCCCH--------HHHHHHHH------
Confidence 011235789999999999986321 222210011111 0101 11111 11112233
Q ss_pred HhhhcCCCCccCccEEecCCCChHH
Q 023575 233 EKLEGRQFSMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq~n~~~ 257 (280)
++|+++|++++|||++.+|-.+.+.
T Consensus 268 ~Al~~Agl~~~dId~v~~hgtgt~~ 292 (392)
T PRK09185 268 QALADAGLAPADIGYINLHGTATPL 292 (392)
T ss_pred HHHHHcCCCHHHccEEEeCCCCCcC
Confidence 3478899999999999999766553
No 89
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.00 E-value=1.2e-08 Score=95.61 Aligned_cols=116 Identities=11% Similarity=0.124 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHHHHcCCC-CCCccE----EEEecccCCCC---------------------CC-----chHHHHHHHH
Q 023575 56 DVISMSLTVVTSLLEKYKID-PTQIGR----LEVGSETVIDK---------------------SK-----SIKTFLMQIF 104 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~-~~~Id~----li~~t~t~~~~---------------------~p-----~~a~~l~~~l 104 (280)
....|+..|+++||+++|++ +++++. +++++..+... .| ..+..+...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 35789999999999999998 666653 33444322210 00 0122222222
Q ss_pred HhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------c----------c--C----C---
Q 023575 105 EKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------Y----------A--E----G--- 158 (280)
Q Consensus 105 ~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~----------~--~----~--- 158 (280)
|++ -+++-+..+|++++.||..|..+|++|.+ +.+||.+.|... + . + +
T Consensus 156 ---~l~-Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd 229 (421)
T PTZ00050 156 ---KLK-GPSGSAVTACATGAHCIGEAFRWIKYGEA--DIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFD 229 (421)
T ss_pred ---CCC-CcccccccHhHHHHHHHHHHHHHHHcCCC--CEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCc
Confidence 332 24677888999999999999999999976 999999988621 0 0 0 0
Q ss_pred --CCCcccCCceEEEEECCCC
Q 023575 159 --PARPTGGAAAVAMLIGPDA 177 (280)
Q Consensus 159 --~~~~~fGDgAaA~ll~~~~ 177 (280)
....++||||+|+||++.+
T Consensus 230 ~~~~G~~~gEGAaalvLe~~~ 250 (421)
T PTZ00050 230 KDRAGFVMGEGAGILVLEELE 250 (421)
T ss_pred CCCCCEeeccceEEEEEeeHH
Confidence 1345789999999999753
No 90
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.98 E-value=9.8e-09 Score=95.66 Aligned_cols=162 Identities=11% Similarity=0.047 Sum_probs=98.7
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC-----CCe-----eeeccCce--e----eecCC----CCCCHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS-----KGK-----YTVGLGQD--C----MAFCS----EVEDVISMSLTV 64 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~-----~~~-----~~~~ig~r--~----~~~~~----~~e~~~~la~~A 64 (280)
+.|.|.|+|...|-- .+.+++.+.+ |.+ +++ +...++-. . ..+.. .-.....|+..|
T Consensus 2 ~~VvITG~g~vtp~G-~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~a 80 (405)
T PRK09116 2 RRVVVTGMGGVTALG-EDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRA 80 (405)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHH
Confidence 469999999999986 3667666542 211 011 00000000 0 00100 001235689999
Q ss_pred HHHHHHHcCCCC------CCccEEEEecccCCC-----------------C--------CCc-hHHHHHHHHHhcCCCCe
Q 023575 65 VTSLLEKYKIDP------TQIGRLEVGSETVID-----------------K--------SKS-IKTFLMQIFEKYGNTDI 112 (280)
Q Consensus 65 a~~aL~~agi~~------~~Id~li~~t~t~~~-----------------~--------~p~-~a~~l~~~l~~~g~~~~ 112 (280)
+++||+++|++. +++ .++++|..+.. . .|. .+..+...++..|
T Consensus 81 a~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G---- 155 (405)
T PRK09116 81 SELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKG---- 155 (405)
T ss_pred HHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCC----
Confidence 999999999842 233 44555533210 0 121 2333444444332
Q ss_pred eeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc------c---------cC------C-----CCCcccCC
Q 023575 113 EGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------Y---------AE------G-----PARPTGGA 166 (280)
Q Consensus 113 ~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s------~---------~~------~-----~~~~~fGD 166 (280)
+.+-+..+|++++.||..|.++|+.|.+ +.+||.++|..+ + .. + ...+++|+
T Consensus 156 p~~ti~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gE 233 (405)
T PRK09116 156 RVIPTSSACTSGSQGIGYAYEAIKYGYQ--TVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGE 233 (405)
T ss_pred CcccccchhhhHHHHHHHHHHHHHcCCC--CEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeec
Confidence 4678899999999999999999999976 999999888632 0 00 1 13567899
Q ss_pred ceEEEEECCC
Q 023575 167 AAVAMLIGPD 176 (280)
Q Consensus 167 gAaA~ll~~~ 176 (280)
||+++||++.
T Consensus 234 Ga~~~vLe~~ 243 (405)
T PRK09116 234 GAGTLVLEEL 243 (405)
T ss_pred cEEEEEEccH
Confidence 9999999964
No 91
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.97 E-value=1.2e-08 Score=97.91 Aligned_cols=223 Identities=17% Similarity=0.200 Sum_probs=127.1
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CC---C-CCee-----eecc-Cc-eee---ecCCC-----CCCHHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GV---S-KGKY-----TVGL-GQ-DCM---AFCSE-----VEDVISMSLTVV 65 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~---~-~~~~-----~~~i-g~-r~~---~~~~~-----~e~~~~la~~Aa 65 (280)
+.|.|.|+|...|-- .+.+++.+.+ |. . .+++ ...+ |. +.+ .+..+ -.....++..|+
T Consensus 129 ~rVvITG~G~vtp~G-~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa 207 (540)
T PLN02787 129 RRVVVTGMGVVSPLG-HDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 207 (540)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHHHH
Confidence 469999999999986 4777776643 21 1 1111 1111 10 000 00000 011346888999
Q ss_pred HHHHHHcCCCCCC---cc----EEEEecccCCC--------------------CCC----c-hHHHHHHHHHhcCCCCee
Q 023575 66 TSLLEKYKIDPTQ---IG----RLEVGSETVID--------------------KSK----S-IKTFLMQIFEKYGNTDIE 113 (280)
Q Consensus 66 ~~aL~~agi~~~~---Id----~li~~t~t~~~--------------------~~p----~-~a~~l~~~l~~~g~~~~~ 113 (280)
++||+++|++++. ++ .|+++|..+.. ..| . .+.++...+ |++ -+
T Consensus 208 ~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~---gl~-Gp 283 (540)
T PLN02787 208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDL---GWM-GP 283 (540)
T ss_pred HHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHh---CCC-CC
Confidence 9999999997642 21 45556543210 011 1 223344444 333 34
Q ss_pred eeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c------c---C------C-----CCCcccCC
Q 023575 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y------A---E------G-----PARPTGGA 166 (280)
Q Consensus 114 ~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~------~---~------~-----~~~~~fGD 166 (280)
.+-+..+|++++.||..|.++|+.|.+ +.+||.++|.. . + . + + ...+++|+
T Consensus 284 ~~tistACASs~~Ai~~A~~~Ir~G~a--D~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GE 361 (540)
T PLN02787 284 NYSISTACATSNFCILNAANHIIRGEA--DVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGE 361 (540)
T ss_pred ccccccccccHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCccccc
Confidence 678889999999999999999999977 99999999952 1 0 0 0 1 13567899
Q ss_pred ceEEEEECCCCC-----ceeeccccccc-cccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 023575 167 AAVAMLIGPDAP-----IAFESKLRGSH-MSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQF 240 (280)
Q Consensus 167 gAaA~ll~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl 240 (280)
||+++||++.+. ..+...+.+.- ..+......| ..+|. .+..+++ ++|+++|+
T Consensus 362 GAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p-------~p~g~--------g~~~am~------~AL~~AGl 420 (540)
T PLN02787 362 GAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEP-------HPEGA--------GVILCIE------KALAQSGV 420 (540)
T ss_pred ceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCC-------CcCHH--------HHHHHHH------HHHHHcCC
Confidence 999999997431 12222111111 1111111111 11221 1112223 24889999
Q ss_pred CccCccEEecCCCChHH
Q 023575 241 SMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 241 ~~~dId~~v~Hq~n~~~ 257 (280)
+++||||+-.|-.+.+.
T Consensus 421 ~p~dIdyInaHGTGT~~ 437 (540)
T PLN02787 421 SKEDVNYINAHATSTKA 437 (540)
T ss_pred CHHHCcEEEccCccCCC
Confidence 99999999999665443
No 92
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.95 E-value=4.7e-09 Score=98.46 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=78.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCC--ccEEEEecccCCC--CCCchHHHHHHHHHhc----CCCCeeeeeccccCchHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQ--IGRLEVGSETVID--KSKSIKTFLMQIFEKY----GNTDIEGVDSTNACYGGT 125 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~--Id~li~~t~t~~~--~~p~~a~~l~~~l~~~----g~~~~~~~dv~~~C~g~~ 125 (280)
+.+..+|+.+|++++|+++|++++| ||.+|+++..... ..+..+..+...+++. |+..++++.++.+|++++
T Consensus 45 ~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~ 124 (438)
T PTZ00455 45 NKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGG 124 (438)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHH
Confidence 4578999999999999999999999 9999987653221 1233344433333333 445678899999999999
Q ss_pred HHHHHHHHHHHhcCCCCCeEEEEEecccc
Q 023575 126 AALFNCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 126 ~aL~~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.|+..|...|++|.+ +.|||++.|..+
T Consensus 125 ~Ai~~A~~~I~sG~~--dvvlv~G~E~ms 151 (438)
T PTZ00455 125 LAVQSAWEALLAGTS--DIALVVGVEVQT 151 (438)
T ss_pred HHHHHHHHHHHCCCC--CEEEEEEEeecc
Confidence 999999999999976 999999999875
No 93
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.94 E-value=3.8e-09 Score=98.15 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=76.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
+.+..+|+.+|++++|+++|++++|||.|++++...++........+.+.+ |++..+++.+..+|++++.++..|..
T Consensus 24 ~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~l---Gl~~~~~~~v~~~c~sg~~ai~~A~~ 100 (398)
T PRK06157 24 DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRAL---RLPNIPVTRVENFCATGSEAFRGAVY 100 (398)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHc---CCCCCCEEEEecccHHHHHHHHHHHH
Confidence 456899999999999999999999999999876543321111224444444 55456788899999999999999999
Q ss_pred HHHhcCCCCCeEEEEEecccc
Q 023575 134 WVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~s 154 (280)
.|++|.+ +.+|++++|..+
T Consensus 101 ~I~sG~~--d~vlv~G~e~~s 119 (398)
T PRK06157 101 AVASGAY--DIALALGVEKLK 119 (398)
T ss_pred HHHCCCC--CEEEEEEEeecc
Confidence 9999977 999999999754
No 94
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.93 E-value=2e-08 Score=91.36 Aligned_cols=174 Identities=10% Similarity=-0.031 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCCccEEEEecccCCC----------------C-CC---------chHHHHHHHHHhcC
Q 023575 57 VISMSLTVVTSLLEKYKI--DPTQIGRLEVGSETVID----------------K-SK---------SIKTFLMQIFEKYG 108 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi--~~~~Id~li~~t~t~~~----------------~-~p---------~~a~~l~~~l~~~g 108 (280)
...++..|++++|+++|+ +++++..++-.+ .+.. . .| ..+.++...+ |
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~-~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~---~ 79 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAG-IGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKH---H 79 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecC-cccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHh---C
Confidence 456889999999999996 667776665332 2210 0 01 1233333333 3
Q ss_pred CCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c----------c--C----C-----CC
Q 023575 109 NTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y----------A--E----G-----PA 160 (280)
Q Consensus 109 ~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~----------~--~----~-----~~ 160 (280)
++ =+.+-+..+|++++.||..|.++|+.|.+ +.+||.++|.. + + . + + ..
T Consensus 80 l~-Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 80 FK-GPIGAPVTACAAGVQAIGDAVRMIRNNEA--DVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred CC-CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 33 24678889999999999999999999976 88999888863 1 1 0 0 0 13
Q ss_pred CcccCCceEEEEECCCCCc-----eeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhh
Q 023575 161 RPTGGAAAVAMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL 235 (280)
Q Consensus 161 ~~~fGDgAaA~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L 235 (280)
.+++||||+++||++.+.. .+...+.+ ++.......... +..+ ......+++. +|
T Consensus 157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g-~~~~~d~~~~~~-----p~p~--------~~~~~~ai~~------AL 216 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEHALARGAKPLAEIVG-YGTSADAYHMTS-----GAED--------GDGAYRAMKI------AL 216 (342)
T ss_pred CccccceEEEEEEeeHHHHHhCCCCceEEEEE-EEEEcCCCCCCC-----CCCC--------HHHHHHHHHH------HH
Confidence 5678999999999965321 11111111 111000000000 1001 1122223332 38
Q ss_pred hcCCCCccCccEEecCCCChHH
Q 023575 236 EGRQFSMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 236 ~~~gl~~~dId~~v~Hq~n~~~ 257 (280)
+++|++++|||++-.|-.+.+.
T Consensus 217 ~~Agl~p~dIdyIeaHgtgT~~ 238 (342)
T PRK14691 217 RQAGITPEQVQHLNAHATSTPV 238 (342)
T ss_pred HHcCCCHHHCCEEEecCCCCcC
Confidence 8899999999999999766554
No 95
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=8.3e-09 Score=95.85 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
+.+..+|+.+|++++|+++|+++++||.+++++..+... .+..+.. .+...|++ .++++.++++|++++.|+..|
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~---~~~~~Glp~~~p~~tV~~~CaSG~~Ai~~A 99 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARN---ALLLAGLPVTVPGQTVNRLCASGLAAVIDA 99 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHH---HHHhcCCCCCCceeeeechhhhHHHHHHHH
Confidence 567899999999999999999999999999987644322 1333332 44445655 588999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
...|++|.+ +.+|+++.|.++
T Consensus 100 ~~~I~sG~~--dvvlagG~Esms 120 (401)
T PRK08131 100 ARAITCGEG--DLYLAGGVESMS 120 (401)
T ss_pred HHHHHCCCC--CEEEEEEecCCC
Confidence 999999976 999999999876
No 96
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=1e-08 Score=96.12 Aligned_cols=96 Identities=7% Similarity=-0.080 Sum_probs=73.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
+.+..+|+.+|+++||+++|++++|||.+++++.......+..+.. .+...+|++..+++.+..+|+++..++..|..
T Consensus 34 ~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~--~~~~~lGl~~~~~~~v~~~~aSg~~ai~~A~~ 111 (430)
T PRK06365 34 YMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGI--MVQDYLGLVPKPSKRIEGGGATGGLAFQAGYE 111 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhH--HHHHhcCCCCCceEEEeCCcHHHHHHHHHHHH
Confidence 4567899999999999999999999999887653322111111211 12234566667788999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEeccc
Q 023575 134 WVESASWDGRYGLVVCTDSA 153 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~ 153 (280)
.|++|.+ +.|||++.|..
T Consensus 112 ~I~sG~~--~~vLv~G~e~~ 129 (430)
T PRK06365 112 EIASGRM--DCVAVYGFETM 129 (430)
T ss_pred HHHcCCC--CEEEEEEeeec
Confidence 9999976 99999999853
No 97
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.89 E-value=6.1e-09 Score=97.64 Aligned_cols=97 Identities=21% Similarity=0.257 Sum_probs=78.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
.+.+..+|+.+|++++|+++|++|++||.+|+++..+....+..+-. .....|++ .++++.++.+|++++.|+..|
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~---~a~~aGl~~~~P~~tV~~aCaSG~~Ai~~A 101 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIARE---IVLGTGMNVHTDAYSVSRACATSFQAVANV 101 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHH---HHHHCCCCCCCcceeehhhhHHHHHHHHHH
Confidence 35678999999999999999999999999999875433211223322 33334655 588999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
...|++|.+ +.+|+++.|.+|
T Consensus 102 a~~I~sG~~--dvvLvgG~Esms 122 (428)
T PRK08963 102 AESIMAGTI--DIGIAGGADSSS 122 (428)
T ss_pred HHHHHCCCC--CEEEEecccccC
Confidence 999999976 999999999876
No 98
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.89 E-value=1.8e-08 Score=93.76 Aligned_cols=220 Identities=14% Similarity=0.063 Sum_probs=125.0
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC----CCee-----eecc-Cce-e----eecCC----CCCCHHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS----KGKY-----TVGL-GQD-C----MAFCS----EVEDVISMSLTVV 65 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~----~~~~-----~~~i-g~r-~----~~~~~----~~e~~~~la~~Aa 65 (280)
+.|.|.|+|...|--. +.+++.+.+ |.+ .+++ ...+ +.. . ..++. .-.....|+..|+
T Consensus 1 ~~VvItG~G~vsp~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (399)
T cd00832 1 RRAVVTGIGVVAPNGL-GVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAA 79 (399)
T ss_pred CCEEEEeeEEeCCCCC-CHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 3588999999999863 666666542 221 0111 0000 000 0 00000 0112456899999
Q ss_pred HHHHHHcCCCCCCcc----EEEEecccCCC-----------------CCC---------chHHHHHHHHHhcCCCCeeee
Q 023575 66 TSLLEKYKIDPTQIG----RLEVGSETVID-----------------KSK---------SIKTFLMQIFEKYGNTDIEGV 115 (280)
Q Consensus 66 ~~aL~~agi~~~~Id----~li~~t~t~~~-----------------~~p---------~~a~~l~~~l~~~g~~~~~~~ 115 (280)
++||+++|+++++++ .|+++|..+.+ ..| ..+..+...+ |++ -+++
T Consensus 80 ~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~---gl~-Gp~~ 155 (399)
T cd00832 80 DWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRH---GMR-GPSG 155 (399)
T ss_pred HHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHh---CCC-CCcc
Confidence 999999999876543 35556543321 001 1123333333 433 3567
Q ss_pred eccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c--------cC-----------CCCCcccCCceE
Q 023575 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y--------AE-----------GPARPTGGAAAV 169 (280)
Q Consensus 116 dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~--------~~-----------~~~~~~fGDgAa 169 (280)
-+..+|++++.||..|.++|+.| . +.+|+.++|.. + + .. +...+++|+||+
T Consensus 156 ti~~acaS~~~Al~~A~~~i~~G--~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~G~~~gEGa~ 232 (399)
T cd00832 156 VVVAEQAGGLDALAQARRLVRRG--T-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGA 232 (399)
T ss_pred cccchhHHHHHHHHHHHHHHHcC--C-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCCCEeeeceEE
Confidence 88899999999999999999999 6 78888888762 1 1 00 113467899999
Q ss_pred EEEECCCCC-----ceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccC
Q 023575 170 AMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (280)
Q Consensus 170 A~ll~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~d 244 (280)
++||++.+. ..+.....+ ++...+.... + . . ......+++. +|+++|++++|
T Consensus 233 ~lvLe~~~~A~~rg~~i~a~i~g-~~~~~d~~~~-------~---~--~----~~~~~~a~~~------al~~ag~~~~~ 289 (399)
T cd00832 233 ILVLEDAAAARERGARVYGEIAG-YAATFDPPPG-------S---G--R----PPGLARAIRL------ALADAGLTPED 289 (399)
T ss_pred EEEEeeHHHHHHCCCeEEEEEEe-EEEcCCCCCC-------C---C--C----HHHHHHHHHH------HHHHcCCCHHH
Confidence 999997532 122221111 1111110000 0 0 0 1122223332 38889999999
Q ss_pred ccEEecCCCChHH
Q 023575 245 VDYFVFHSPYNKL 257 (280)
Q Consensus 245 Id~~v~Hq~n~~~ 257 (280)
|||+..|-.+.+.
T Consensus 290 i~~v~~hgtgt~~ 302 (399)
T cd00832 290 VDVVFADAAGVPE 302 (399)
T ss_pred ccEEEeccCcCCC
Confidence 9999999655443
No 99
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.87 E-value=9.7e-09 Score=95.05 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=76.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCc-hHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~-~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
+.++.+|+.+|++++|+++|++|++||.+++++......... .+-.+... .|++ .++++.++++|++++.|+..|
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~---~Gl~~~~p~~tV~~~CaSG~~A~~~A 99 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLH---AGLPYHVGATTIDCQCGSAQQANHLV 99 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHh---CCCCCCCceEEEecccccHHHHHHHH
Confidence 456899999999999999999999999999986542221111 22121112 3555 588999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+.|++|.+ +.+|+++.|.+|
T Consensus 100 ~~~I~sG~~--dvvla~G~E~mS 120 (387)
T PRK07850 100 AGLIAAGAI--DVGIACGVEAMS 120 (387)
T ss_pred HHHHHCCCC--CEEEEEeEecCC
Confidence 999999976 999999999987
No 100
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.87 E-value=9.2e-08 Score=83.19 Aligned_cols=114 Identities=20% Similarity=0.175 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcc-----EEEEecccCCC---------------C--------CCc-hHHHHHHHHHhc
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIG-----RLEVGSETVID---------------K--------SKS-IKTFLMQIFEKY 107 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id-----~li~~t~t~~~---------------~--------~p~-~a~~l~~~l~~~ 107 (280)
...|+..|+.+||+++|+++.+++ .|++++..+++ . .|. .+..+...+++.
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 568999999999999999885432 24445544421 1 111 334444454443
Q ss_pred CCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecc-cc------c------cC---------CCCCcccC
Q 023575 108 GNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS-AV------Y------AE---------GPARPTGG 165 (280)
Q Consensus 108 g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~-~s------~------~~---------~~~~~~fG 165 (280)
| +++-+..+|++++.||..|..+|++|.+ +.+||.++|. .+ + .. ....+++|
T Consensus 167 G----~~~tv~~acaSgl~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~g 240 (254)
T PF00109_consen 167 G----PSYTVSTACASGLAALEAAYRAIRSGEA--DVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLG 240 (254)
T ss_dssp S----SEEEEE-GGGHHHHHHHHHHHHHHTTSS--SEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB
T ss_pred C----ccccccccccccccccchhccccccccc--cccccccccccccccccccccccccccccccccccCCCCCCEEEE
Confidence 3 4677899999999999999999999977 9999999993 32 1 11 12357899
Q ss_pred CceEEEEECCC
Q 023575 166 AAAVAMLIGPD 176 (280)
Q Consensus 166 DgAaA~ll~~~ 176 (280)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999863
No 101
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.86 E-value=8.6e-09 Score=96.57 Aligned_cols=95 Identities=19% Similarity=0.248 Sum_probs=78.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHh-cCCC-CeeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK-YGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~-~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
+.+..+|+.+|++++|+++|++|++||.+|+++..+.... ..+++.+.+ .|++ .++++.++++|++++.|+.+|
T Consensus 28 ~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~----~~~ar~~~l~aGl~~~~p~~~V~~~CaSG~~A~~~a 103 (430)
T TIGR02446 28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEA----PNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNV 103 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCcc----chHHHHHHHhCCCCCCCchhhhhhhhhHHHHHHHHH
Confidence 4578999999999999999999999999999875543211 223344322 4555 688999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
...|++|.+ +.+|+++.|.+|
T Consensus 104 ~~~I~sG~~--dvvla~G~E~mS 124 (430)
T TIGR02446 104 AESIMAGAI--DIGIAGGADSSS 124 (430)
T ss_pred HHHHHCCCC--CEEEEeeeEccc
Confidence 999999976 999999999987
No 102
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.84 E-value=9.1e-09 Score=95.24 Aligned_cols=97 Identities=11% Similarity=0.173 Sum_probs=79.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+..+.+|+.+|++++|+++|++|++||.+++++..+...-+..+.. .....|++ .++++.++++|++++.|+..|.
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~---~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~ 100 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQ---TLIHAGIPKEVPGYTINKVCGSGLKSVALAA 100 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHH---HHHHCCCCCCccchhhcchhHHHHHHHHHHH
Confidence 4678999999999999999999999999999875543222223322 23345665 5899999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEeccccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAVY 155 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s~ 155 (280)
..|++|.+ +.+|+++.|.+|.
T Consensus 101 ~~I~sG~~--dvvla~G~E~ms~ 121 (392)
T PRK06633 101 NSIMTGDN--EIVIAGGQENMSL 121 (392)
T ss_pred HHHHcCCC--CEEEEcccccCCC
Confidence 99999976 9999999998873
No 103
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.84 E-value=1.4e-08 Score=94.03 Aligned_cols=95 Identities=8% Similarity=0.087 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHHH
Q 023575 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 55 e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
.+..+|+.+|++++|+++|++++|||.+|+++..+....+..+..+. ..+|++ .++++.++.+|++++.++..|..
T Consensus 24 ~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~---~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~ 100 (388)
T PRK06366 24 IKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAA---YHAGLPFGVTKYTVNVVCASGMLAVESAAR 100 (388)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHH---HHCCCCCCCcceeeechhhHHHHHHHHHHH
Confidence 57899999999999999999999999999876533211122333333 334554 47888889999999999999999
Q ss_pred HHHhcCCCCCeEEEEEecccc
Q 023575 134 WVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~s 154 (280)
.|++|.+ +.||+++.|..+
T Consensus 101 ~I~sG~~--d~vla~G~e~ms 119 (388)
T PRK06366 101 EIMLGER--DLVIAGGMENMS 119 (388)
T ss_pred HHhcCCC--CEEEEEeeEccc
Confidence 9999976 999988889865
No 104
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.83 E-value=1.8e-08 Score=93.57 Aligned_cols=96 Identities=10% Similarity=0.072 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+.+..+|+.+|++++|+++|++++|||.||+++.......+..+.. ....+|++ +.+++.++.+|++++.++..|.
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~---~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa 98 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQ---AALGAGLPPSTICTTVNKVCASGMKAVMLAA 98 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHH---HHHhcCCCCCCceEEEeccchHHHHHHHHHH
Confidence 4678999999999999999999999999998754322111222222 22334554 4778889999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
+.|++|.+ +.||+++.|..+
T Consensus 99 ~~I~sG~~--d~vlv~G~E~~s 118 (394)
T PLN02644 99 QSIQLGIN--DVVVAGGMESMS 118 (394)
T ss_pred HHHHcCCC--CEEEEEeEEecC
Confidence 99999976 999999988775
No 105
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.83 E-value=1.4e-08 Score=94.26 Aligned_cols=96 Identities=9% Similarity=0.135 Sum_probs=77.9
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~ 130 (280)
+.+..+|+.+|++++|++ +|++|++||.||+++..+... .+..+..+... .|++ +++++.++++|++++.|+..
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~---~Gl~~~vP~~tV~~aCaSG~~Ai~~ 99 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALL---AGLPVSVPGTTINRLCGSGMDAVGT 99 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHH---cCCCCCCceEEEecccccHHHHHHH
Confidence 567899999999999995 799999999999987643221 13334333333 4553 58999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|.+.|++|.+ +.+|+++.|.+|
T Consensus 100 A~~~I~sG~~--dvvlagGvEsmS 121 (401)
T PRK09050 100 AARAIKAGEA--ELMIAGGVESMS 121 (401)
T ss_pred HHHHHHCCCC--CEEEEecccccc
Confidence 9999999976 999999999987
No 106
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=2e-08 Score=93.05 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=76.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCC-CchHHHHHHHHHhcCC-CCeeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGN-TDIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~-p~~a~~l~~~l~~~g~-~~~~~~dv~~~C~g~~~aL~~A 131 (280)
+.+..+|+.+|++++|+++|+++++||.+|+++..+.... +..+... -+.. |+ .+++++.++.+|++++.|+..|
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~-~l~~--gl~~~vP~~tV~~~CaSG~~Ai~~A 99 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNA-VLAS--KLPESVPGTSIDRQCGSSQQALHFA 99 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHH-HHHc--CCCCCCceEEEechhhHHHHHHHHH
Confidence 5668999999999999999999999999999865532111 2222111 1212 33 3688999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+.|++|.+ +.+|+++.|.+|
T Consensus 100 ~~~I~sG~~--dvvLagGvEsmS 120 (390)
T PRK06504 100 AQAVMSGTM--DIVIAAGVESMT 120 (390)
T ss_pred HHHHHCCCC--CEEEEeeeeecC
Confidence 999999976 999999999986
No 107
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.82 E-value=7.2e-08 Score=89.51 Aligned_cols=215 Identities=11% Similarity=0.011 Sum_probs=124.9
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhh--CCCC-C----e---eee-ccCc---eeeecCC-----CCCCHHHHHHHHHH
Q 023575 6 PKNVGILALDIYFPPTCVLQEALEVHD--GVSK-G----K---YTV-GLGQ---DCMAFCS-----EVEDVISMSLTVVT 66 (280)
Q Consensus 6 ~~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~~-~----~---~~~-~ig~---r~~~~~~-----~~e~~~~la~~Aa~ 66 (280)
.+.|.|.|+|...|--. +.+++.+.+ |.+. . . +.. .++. +. ++.. .-.....|+..|++
T Consensus 5 ~~rVvITGiG~vsp~G~-~~e~~w~aL~~G~sg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~r~~~~a~~Aa~ 82 (398)
T PRK06519 5 PNDVVITGIGLVSSLGE-GLDAHWNALSAGRPQPNVDTETFAPYPVHPLPEIDWSQ-QIPKRGDQRQMETWQRLGTYAAG 82 (398)
T ss_pred CCCEEEEcceEECCCCC-CHHHHHHHHHcCCCCCCCCcccccCcCcccccccChhh-cCCchhhhhccCHHHHHHHHHHH
Confidence 45799999999999863 666666542 2221 0 0 100 0110 00 0110 01124668999999
Q ss_pred HHHHHcCCCCC-----CccEEEEecccCCCC-----------------------------CC--------c-hHHHHHHH
Q 023575 67 SLLEKYKIDPT-----QIGRLEVGSETVIDK-----------------------------SK--------S-IKTFLMQI 103 (280)
Q Consensus 67 ~aL~~agi~~~-----~Id~li~~t~t~~~~-----------------------------~p--------~-~a~~l~~~ 103 (280)
+||+++|+++. ++..++ +|..+... .| . .+..+...
T Consensus 83 ~Al~dAGl~~~~~~~~r~Gviv-Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 161 (398)
T PRK06519 83 LALDDAGIKGNEELLSTMDMIV-AAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISIV 161 (398)
T ss_pred HHHHHcCCCCCCCCccceEEEE-EeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHHH
Confidence 99999998543 444444 44332200 01 1 22223333
Q ss_pred HHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c------c--------CC----
Q 023575 104 FEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y------A--------EG---- 158 (280)
Q Consensus 104 l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~------~--------~~---- 158 (280)
+ |++ =+++-+..+|++++.||..|.++|+.|.+ +.+||.++|.. + + . ++
T Consensus 162 ~---gl~-Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~--d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~~~~ 235 (398)
T PRK06519 162 H---KVT-GSSRTFMGEESAGVSAIEIAFARIASGQS--DHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGED 235 (398)
T ss_pred h---CCC-CccccccCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccCccC
Confidence 3 433 25778899999999999999999999976 99999999862 1 1 0 11
Q ss_pred CCCcccCCceEEEEECCCCC-----ceeeccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHH
Q 023575 159 PARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE 233 (280)
Q Consensus 159 ~~~~~fGDgAaA~ll~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (280)
...++.|+||+++||++.+. ..+...+.+. +.+. . + . .+ . .+..+++ .
T Consensus 236 r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~-~~d~---~-~-------~-~~----~----~~~~am~------~ 288 (398)
T PRK06519 236 GGGFILGSGGAFLVLESREHAEARGARPYARISGV-ESDR---A-R-------R-AP----G----DLEASLE------R 288 (398)
T ss_pred CCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEE-eecC---C-C-------C-Ch----H----HHHHHHH------H
Confidence 23457899999999997542 1222222221 1110 0 0 0 00 1 2222333 3
Q ss_pred hhhcCCCCccCccEEecCCCChHH
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~ 257 (280)
+|+++|+ ++||||+..|-.+.+.
T Consensus 289 AL~~Agl-~~~IdyI~ahgtgT~~ 311 (398)
T PRK06519 289 LLKPAGG-LAAPTAVISGATGAHP 311 (398)
T ss_pred HHHHCCC-cccCCEEEeCCCCCCC
Confidence 4889999 7999999999665544
No 108
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.80 E-value=2.3e-08 Score=92.87 Aligned_cols=95 Identities=13% Similarity=0.159 Sum_probs=77.7
Q ss_pred CCHHHHHHHHHHHHHHH-cCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHH
Q 023575 55 EDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 55 e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A 131 (280)
.++.+|+.+|++++|++ +|++|++||.+|+++..+... -+..+..+... .|++ +++++.++++|++++.|+.+|
T Consensus 24 ~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~---~Gl~~~vp~~tV~~~CaSG~~Av~~A 100 (400)
T PRK13359 24 VRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLL---AGLPHGVPGSTINRLCGSGMDAVGVA 100 (400)
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHH---cCCCCCCceEEEeccchhHHHHHHHH
Confidence 46799999999999996 599999999999987653321 14445443333 3554 489999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+.|++|.+ +.+|+++.|.+|
T Consensus 101 ~~~I~sG~~--divlagGvEsmS 121 (400)
T PRK13359 101 ARAIKSGEA--ALMIAGGVESMS 121 (400)
T ss_pred HHHHHcCCC--CEEEEeeeeccC
Confidence 999999976 999999999987
No 109
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.77 E-value=2.7e-08 Score=92.43 Aligned_cols=96 Identities=11% Similarity=0.152 Sum_probs=77.9
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~ 130 (280)
+.++.+|+.+|++++|++ ++++|++||.+|+++..+... .+..+..+... .|++ +++++.|+++|++++.|+..
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~---~Gl~~~~p~~~V~~~CaSG~~Ai~~ 98 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALL---AGLPVSVPGTTVNRLCGSGLDAIGM 98 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHH---cCCCCCCceEEeechhhhHHHHHHH
Confidence 456799999999999995 799999999999987543211 13344333333 4555 58999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|...|++|.+ +.+|+++.|.+|
T Consensus 99 a~~~I~sG~~--d~~la~G~E~ms 120 (400)
T TIGR02430 99 AARAIKAGEA--DLLIAGGVESMS 120 (400)
T ss_pred HHHHHHCCCC--CEEEEecccccc
Confidence 9999999976 999999999987
No 110
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.77 E-value=1.3e-07 Score=88.53 Aligned_cols=222 Identities=12% Similarity=0.081 Sum_probs=123.4
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC-----CCe------eeeccCce---ee-ecCCCC-----CCHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS-----KGK------YTVGLGQD---CM-AFCSEV-----EDVISMSLTV 64 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~-----~~~------~~~~ig~r---~~-~~~~~~-----e~~~~la~~A 64 (280)
+.|.|.|+|...|--. +.+++.+.+ |.+ +++ +...++-. .+ ....+. ....-++..|
T Consensus 12 ~~VvItGig~~sp~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~~~~~~~~~~~d~~~~~~l~a 90 (418)
T PRK07910 12 PNVVVTGIAMTTALAT-DAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTRVELRRMSYLQRMSTVL 90 (418)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccccCCHHHHhhccHHHHHHHHH
Confidence 5699999999999854 777776643 211 110 00001000 00 000000 1134588899
Q ss_pred HHHHHHHcCC---CCCCccEEEEecccCCC-------------------------CCCc-hHHHHHHHHHhcCCCCeeee
Q 023575 65 VTSLLEKYKI---DPTQIGRLEVGSETVID-------------------------KSKS-IKTFLMQIFEKYGNTDIEGV 115 (280)
Q Consensus 65 a~~aL~~agi---~~~~Id~li~~t~t~~~-------------------------~~p~-~a~~l~~~l~~~g~~~~~~~ 115 (280)
+++||+++|+ +++++..++ ++..+.. ..|. .+.++...+ |++ -+.+
T Consensus 91 a~~AledAg~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~---~~~-G~~~ 165 (418)
T PRK07910 91 GRRVWENAGSPEVDTNRLMVSI-GTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLER---HAK-AGVI 165 (418)
T ss_pred HHHHHHHcCCCCCCcccEEEEE-EEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHh---CCC-CCcc
Confidence 9999999996 455665544 4432210 0111 222222232 222 2456
Q ss_pred eccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c-------c-----C----C-----CCCcccCCc
Q 023575 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y-------A-----E----G-----PARPTGGAA 167 (280)
Q Consensus 116 dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~-------~-----~----~-----~~~~~fGDg 167 (280)
.+..+|++++.||..|.++|+.|.+ +.+||.++|.. + + . + + ...+++|+|
T Consensus 166 ti~taCaS~~~Al~~A~~~I~~G~~--d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gEG 243 (418)
T PRK07910 166 TPVSACASGSEAIAQAWRQIVLGEA--DIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEG 243 (418)
T ss_pred cccchhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeece
Confidence 7789999999999999999999976 99999999863 1 1 0 0 0 135678999
Q ss_pred eEEEEECCCCC-----ceeeccccccccc-cccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 023575 168 AVAMLIGPDAP-----IAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFS 241 (280)
Q Consensus 168 AaA~ll~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~ 241 (280)
++++||++.+. ..+.....+.... +......| ...+ .....+++ ++|+++|++
T Consensus 244 aa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~-------~~~~--------~~~~~a~~------~Al~~agi~ 302 (418)
T PRK07910 244 GALMVIETEEHAKARGANILARIMGASITSDGFHMVAP-------DPNG--------ERAGHAMT------RAIELAGLT 302 (418)
T ss_pred EEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCC-------CCCH--------HHHHHHHH------HHHHHhCCC
Confidence 99999997532 1111111111100 00011111 1111 11122233 237889999
Q ss_pred ccCccEEecCCCChHH
Q 023575 242 MLDVDYFVFHSPYNKL 257 (280)
Q Consensus 242 ~~dId~~v~Hq~n~~~ 257 (280)
++|||++-.|-.+.+.
T Consensus 303 ~~did~ie~hgtgt~~ 318 (418)
T PRK07910 303 PGDIDHVNAHATGTSV 318 (418)
T ss_pred HHHCCEEEcCCcCCCC
Confidence 9999999999766543
No 111
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=98.74 E-value=3e-08 Score=87.28 Aligned_cols=91 Identities=67% Similarity=1.139 Sum_probs=65.6
Q ss_pred eccccccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhh---hcCCCCccCccEEecCCCChHHH
Q 023575 182 ESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL---EGRQFSMLDVDYFVFHSPYNKLV 258 (280)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L---~~~gl~~~dId~~v~Hq~n~~~~ 258 (280)
.....++|+++..|||+|...+++|.+||++++..|..++..+.+.+.++.+.+ ...+...+|+|++++|.|..++.
T Consensus 4 d~~~~~~~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~klv 83 (282)
T PF08540_consen 4 DRGLRGSHMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYCKLV 83 (282)
T ss_dssp ETTEEEEEE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSHHHH
T ss_pred cCCCceeehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCchHHH
Confidence 334557899999999999888899999999999999999999999997654322 25688899999999999999999
Q ss_pred HHHHHHhhhhhhhc
Q 023575 259 QKSFARLFFNDFLR 272 (280)
Q Consensus 259 ~~~~~~l~~~~~~~ 272 (280)
++...+|.+++..+
T Consensus 84 ~Ka~~rl~~~D~~~ 97 (282)
T PF08540_consen 84 QKAFARLLYNDFLR 97 (282)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhh
Confidence 99999998877665
No 112
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.72 E-value=5.6e-08 Score=89.96 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHHH
Q 023575 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCVN 133 (280)
Q Consensus 55 e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~~ 133 (280)
.+..+|+.+|++++|+++|++++|||.||+++................+ ..|+. ..+++.++.+|++++.++..|.+
T Consensus 24 ~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l--~~gl~~~~p~~~v~~acaSg~~Av~~Aa~ 101 (382)
T PRK07801 24 VHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWL--AAGLPEEVPGVTVDRQCGSSQQAIHFAAQ 101 (382)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHH--HcCCCCCCceeeecchhhhHHHHHHHHHH
Confidence 5789999999999999999999999999987531111111111111111 12332 36778899999999999999999
Q ss_pred HHHhcCCCCCeEEEEEecccc
Q 023575 134 WVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~~s 154 (280)
.|++|.+ +.|||++.|..+
T Consensus 102 ~I~sG~~--d~vLv~G~e~ms 120 (382)
T PRK07801 102 AVMSGTQ--DLVVAGGVQNMS 120 (382)
T ss_pred HHHCCCC--CEEEEcchhhhc
Confidence 9999977 999998898664
No 113
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.71 E-value=5.1e-08 Score=90.30 Aligned_cols=96 Identities=16% Similarity=0.119 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~ 130 (280)
+....+|+.++++++|++ +|+++++||.+++++..+... .+..+..+. ...|.+ .++++.++++|++++.|+..
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~---~~~Gl~~~~p~~~V~~~caSG~~Ai~~ 100 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAA---LLAGIPHSVPAVTVNRLCGSSMQALHD 100 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHH---HHcCCCCCCcceeeechhHHHHHHHHH
Confidence 456799999999999996 799999999999986543221 122332222 234555 48889999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|..+|++|.+ +.+|+++.|.++
T Consensus 101 A~~~I~sG~~--d~vlv~G~E~ms 122 (387)
T PRK08947 101 AARAIMTGDG--DVFLIGGVEHMG 122 (387)
T ss_pred HHHHHHCCCC--CEEEEccccccc
Confidence 9999999976 999999999876
No 114
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.68 E-value=5.6e-08 Score=89.95 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=74.9
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCCCCccEEEEecccCCCC-CCchHHHHHHHHH-hcCCC-CeeeeeccccCchHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFE-KYGNT-DIEGVDSTNACYGGTAALF 129 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~-~~g~~-~~~~~dv~~~C~g~~~aL~ 129 (280)
+.++.+|+.+|++.+|++ +|++|++||.++++....... .+..+ +... ..|.+ .++++.++.+|++++.|+.
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~a----r~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~ 97 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIA----RNAALLAQIPHTSAAVTVNRLCGSSMQALH 97 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHH----HHHHHHCCCCCCcchhhhhhhhHHHHHHHH
Confidence 556789999999999996 599999999999987642211 12122 2322 23443 3788999999999999999
Q ss_pred HHHHHHHhcCCCCCeEEEEEecccc
Q 023575 130 NCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 130 ~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.|.+.|++|.+ +.+|+++.|.+|
T Consensus 98 ~Aa~~I~sG~~--d~vlagG~E~ms 120 (385)
T TIGR02445 98 DAARAIMTGDA--DVCLVGGVEHMG 120 (385)
T ss_pred HHHHHHHCCCC--CEEEEeeehhcc
Confidence 99999999976 999999999876
No 115
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=1.7e-07 Score=86.84 Aligned_cols=103 Identities=8% Similarity=-0.024 Sum_probs=76.6
Q ss_pred eeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc
Q 023575 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (280)
Q Consensus 40 ~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~ 119 (280)
..|+|...+.. .++.+..+|+.+|+++||+++||+++|||.+++.+..+. .....+.+. +|++..+...+..
T Consensus 9 IvG~g~t~~~~-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~----~~~~~~~~~---lGl~~~~~~~v~~ 80 (388)
T PRK08142 9 IVGAYEHPTRK-APDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPG----LGPASMVDY---LGLKLRHVDSTET 80 (388)
T ss_pred EEEEeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCC----ccHHHHHHh---CCCCCeeeccccC
Confidence 35666554322 245678999999999999999999999999875322211 111233344 4554456777888
Q ss_pred cCchHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Q 023575 120 ACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (280)
Q Consensus 120 ~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~ 152 (280)
+|+++..++..|...|++|.+ +.||||+.|+
T Consensus 81 gg~s~~~a~~~A~~~I~sG~~--d~vLvvg~e~ 111 (388)
T PRK08142 81 GGSSYLAHVGHAAQAIAAGKC--SVALITLAGR 111 (388)
T ss_pred CcHHHHHHHHHHHHHHHcCCC--CEEEEEeeee
Confidence 999999999999999999977 9999999885
No 116
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=9.5e-08 Score=89.54 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCC-CCeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~-~~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+.+..+|+.+|++++|+++|+++++||.+++++..+....+..+..+ .+. .|+ ...+++.++.+|++++.++..|.
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~--~l~-~gl~~~~p~~~V~~~CaSG~~ai~~A~ 104 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTREC--VLG-SALSPYTPAYDLQQACGTGLEAAILVA 104 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHH--HHH-cCCCCCCceeeeechhhHHHHHHHHHH
Confidence 45789999999999999999999999999998754321112222221 122 123 34788999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..|++|.+ +.+|+++.|..|
T Consensus 105 ~~I~sG~~--d~vlvgG~E~ms 124 (427)
T PRK09268 105 NKIALGQI--DSGIAGGVDTTS 124 (427)
T ss_pred HHHHCCCC--CEEEEeeEEccC
Confidence 99999976 999999999886
No 117
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=98.66 E-value=7.2e-09 Score=75.91 Aligned_cols=46 Identities=28% Similarity=0.330 Sum_probs=36.3
Q ss_pred hhcCCCCccCccEEecCCCChHHHHHHHHHhhh------hhhhc--cCCCCCCC
Q 023575 235 LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFF------NDFLR--NASLPSIC 280 (280)
Q Consensus 235 L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~------~~~~~--NtssasI~ 280 (280)
|+++|++++|||+|++||+|.++++.+.+++++ .++.+ ||+|+|+|
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~ 54 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIP 54 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHH
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHH
Confidence 678999999999999999999999999999987 24444 99999875
No 118
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.66 E-value=6.4e-07 Score=83.51 Aligned_cols=163 Identities=13% Similarity=0.101 Sum_probs=99.6
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC---C-Ceee-ec--------cCceeeecCC-----CCCCHHHHHHHHHH
Q 023575 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT-VG--------LGQDCMAFCS-----EVEDVISMSLTVVT 66 (280)
Q Consensus 7 ~~~~I~~ig~~lP~~~v~~~~~~~~~--g~~---~-~~~~-~~--------ig~r~~~~~~-----~~e~~~~la~~Aa~ 66 (280)
+.|.|.|+|...|-- .+.+++.+.+ |.+ + ..+. .+ +......+.+ .-.....++..|++
T Consensus 2 ~rVvITG~G~vsp~G-~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIG-NNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCC-CCHHHHHHHHHcCCCceeECCcccccCCCCceEEEcCCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 468999999999987 4667766542 221 0 1110 00 0000000000 11224568999999
Q ss_pred HHHHHcCCCCCCcc----EEEEecccCCC--------------------------CCCc-hHHHHHHHHHhcCCCCeeee
Q 023575 67 SLLEKYKIDPTQIG----RLEVGSETVID--------------------------KSKS-IKTFLMQIFEKYGNTDIEGV 115 (280)
Q Consensus 67 ~aL~~agi~~~~Id----~li~~t~t~~~--------------------------~~p~-~a~~l~~~l~~~g~~~~~~~ 115 (280)
+||+++|+++.+.+ .|+++|..+.. ..|+ .+..+...+++.| +++
T Consensus 81 ~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~G----p~~ 156 (406)
T PRK07967 81 QAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG----VNY 156 (406)
T ss_pred HHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCC----Ccc
Confidence 99999998754332 24444432211 0011 3344444444332 467
Q ss_pred eccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc------c------c----C------C-----CCCcccCCce
Q 023575 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------Y------A----E------G-----PARPTGGAAA 168 (280)
Q Consensus 116 dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s------~------~----~------~-----~~~~~fGDgA 168 (280)
-++.+|++++.||..|.++|+.|.+ +.+||.++|..+ + . . + ...++.|+||
T Consensus 157 tvs~aCas~~~Ai~~A~~~ir~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGa 234 (406)
T PRK07967 157 SISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGG 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceE
Confidence 7899999999999999999999976 999999888632 1 0 0 1 1345789999
Q ss_pred EEEEECCC
Q 023575 169 VAMLIGPD 176 (280)
Q Consensus 169 aA~ll~~~ 176 (280)
+++||++.
T Consensus 235 a~lvLe~~ 242 (406)
T PRK07967 235 GVVVVEEL 242 (406)
T ss_pred EEEEEeeH
Confidence 99999974
No 119
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.65 E-value=1.9e-06 Score=75.42 Aligned_cols=181 Identities=14% Similarity=0.063 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~ 136 (280)
-..|..+|++.+|++++++++|||+++-+---.. .. .+.+..+.| + +|-+-+=++|+.+..+|.+|+.++.
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ-~i--~s~f~ar~l---~---iPf~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQ-II--SSSFAARDL---G---IPFLGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCC-CC--HHHHHHHHH---T-----EEEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhh-hH--HHHHHHHhc---C---CCccchhhHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999987654333 33 344533443 3 5567888999999999999999999
Q ss_pred hcCCCCCeEEEEEecccc-----cc-------CC-CCCcccCCceEEEEECCCCCc-eeeccccccccccccccccCCCC
Q 023575 137 SASWDGRYGLVVCTDSAV-----YA-------EG-PARPTGGAAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLA 202 (280)
Q Consensus 137 ~g~~~~~~vLvv~~e~~s-----~~-------~~-~~~~~fGDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 202 (280)
.|-+ ++||..++.... |+ .+ +++.---=||+|+||++.+.. .+.. .+.|+-. |+ |
T Consensus 122 gg~a--~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~p~It~---~T~GkVv-D~-----G 190 (329)
T PF07451_consen 122 GGFA--DYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSGPRITH---ATIGKVV-DM-----G 190 (329)
T ss_dssp TTS---SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--SEEEEE---EE----B--S-----S
T ss_pred CCCc--ceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCCcEEEE---EEEEEEE-Ec-----C
Confidence 9976 999998876542 21 12 344444678999999987543 3322 2333311 11 0
Q ss_pred CcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccEEecCC---CChHHHHHHHHHhhh
Q 023575 203 SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHS---PYNKLVQKSFARLFF 267 (280)
Q Consensus 203 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq---~n~~~~~~~~~~l~~ 267 (280)
. .|- +.+. ......+.+.+. ..|+..|.+++|.|.++.-- .+.+|+...+++.|+
T Consensus 191 ~----~D~-~nMG--aAMAPAA~dTI~---~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G~ 248 (329)
T PF07451_consen 191 I----KDP-NNMG--AAMAPAAADTIE---QHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKGY 248 (329)
T ss_dssp -------T-T-HH--HHHHHHHHHHHH---HHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT-
T ss_pred C----CCc-ccch--hhHhHHHHHHHH---HHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHHcCC
Confidence 0 010 0011 111123445554 34899999999999999753 567888888887765
No 120
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.56 E-value=5.5e-07 Score=85.96 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=78.4
Q ss_pred eeccCceeeecCCCC--CCHHHHHHHHHHHHHHHcCCC--CCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeee
Q 023575 40 TVGLGQDCMAFCSEV--EDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV 115 (280)
Q Consensus 40 ~~~ig~r~~~~~~~~--e~~~~la~~Aa~~aL~~agi~--~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~ 115 (280)
..|+|+...+...++ .+..+|+.+|+++||+++|++ ++|||.+++++.... ........+.+.+ |+......
T Consensus 8 IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~l---Gl~p~~~~ 83 (498)
T PRK08257 8 IVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERL---GADPARTV 83 (498)
T ss_pred EEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHc---CCCCccee
Confidence 357776543221222 278999999999999999999 999999997654222 1122234444444 54434445
Q ss_pred eccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc
Q 023575 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 116 dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
....||.+...++..|...|++|.+ +.|||+++|..+
T Consensus 84 ~~~~GG~s~~~~v~~Aa~~IasG~a--dvVLv~G~E~~~ 120 (498)
T PRK08257 84 YSPVGGNSPQRLVNEAALRIAAGEA--DVALVAGAEAQS 120 (498)
T ss_pred EecCCCHHHHHHHHHHHHHHHCCCC--CEEEEeeeeecc
Confidence 5567888999999999999999977 999999999864
No 121
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.54 E-value=2.2e-06 Score=79.53 Aligned_cols=176 Identities=14% Similarity=0.155 Sum_probs=106.3
Q ss_pred CHHHHHHHHHHHHHHHcCCC-CCCcc--E-EEEecccCCC----------------------C----CCc-hHHHHHHHH
Q 023575 56 DVISMSLTVVTSLLEKYKID-PTQIG--R-LEVGSETVID----------------------K----SKS-IKTFLMQIF 104 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~-~~~Id--~-li~~t~t~~~----------------------~----~p~-~a~~l~~~l 104 (280)
....|++.|+++||+++|++ ..+.+ . ++++|..+.. . .|. .+..+...+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 46789999999999999997 33342 2 2233322110 0 111 223333333
Q ss_pred HhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------c-------cC--------C----
Q 023575 105 EKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y-------AE--------G---- 158 (280)
Q Consensus 105 ~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~-------~~--------~---- 158 (280)
+..| +.+-+..+|+++.+++..|.++|+.|.. +.+|+.++|.. + | +. +
T Consensus 150 g~~G----~~~~~~tACatg~~AIg~A~~~I~~G~a--d~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 150 GLKG----PNYTPVTACATGAHAIGDAVRLIRLGKA--DVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred CCCC----CcCChhhhHHhHHHHHHHHHHHHHcCCC--CEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 3322 4677889999999999999999999976 88899888762 1 1 01 0
Q ss_pred -CCCcccCCceEEEEECCCCC-----ceeeccccccccccc--cccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHH
Q 023575 159 -PARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMSHA--YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQ 230 (280)
Q Consensus 159 -~~~~~fGDgAaA~ll~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 230 (280)
..-+++|.||+++||+..+- ..|.... .-++... +..-.|. .+|. ....+++
T Consensus 224 ~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei-~G~g~~~Da~h~t~P~-------p~g~--------Ga~~am~---- 283 (412)
T COG0304 224 NRDGFVIGEGAGALVLEELEHALARGAKIYAEI-VGYGTTSDAYHITAPA-------PDGE--------GAIRAMR---- 283 (412)
T ss_pred CCCCEEEecceeEEEecChhhHHhCCCceEEEE-EEEEecccccccCCCC-------CCCc--------hHHHHHH----
Confidence 23578999999999997541 1233221 1122211 2222232 1222 1112222
Q ss_pred HHHhhhcCCCCccCccEEecCCCChHHHH
Q 023575 231 KFEKLEGRQFSMLDVDYFVFHSPYNKLVQ 259 (280)
Q Consensus 231 ~~~~L~~~gl~~~dId~~v~Hq~n~~~~~ 259 (280)
.+|+.+|++++||||+..|--+.+.-+
T Consensus 284 --~AL~~Agl~~~~idYinaHgTsT~~nD 310 (412)
T COG0304 284 --AALADAGLTPEDIDYINAHGTSTPAND 310 (412)
T ss_pred --HHHHHcCCCHhHCCEEeCCCccCCCcc
Confidence 248899999999999999965544443
No 122
>PRK07855 lipid-transfer protein; Provisional
Probab=98.52 E-value=7.6e-07 Score=82.50 Aligned_cols=100 Identities=10% Similarity=0.025 Sum_probs=73.5
Q ss_pred eeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCC-eeeeecc
Q 023575 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IEGVDST 118 (280)
Q Consensus 40 ~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~-~~~~dv~ 118 (280)
..|+|...+.. .++.+..+|+.+|+++||+++||+++|||.+++.+. . ..+. ..+.+. +|.+. .+...+.
T Consensus 8 IvG~g~t~~~r-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~-~~~~--~~l~~~---lGl~~~~~~~~v~ 78 (386)
T PRK07855 8 IVGIGATEFSK-NSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM--D-TNPE--IAVARA---LGIGELKFFSRIH 78 (386)
T ss_pred EEEeeeccccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--c-cccH--HHHHHH---CCCCCCcceeeec
Confidence 34665543222 235678999999999999999999999999986432 1 1222 333344 45443 3445788
Q ss_pred ccCchHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q 023575 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCT 150 (280)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~ 150 (280)
++|+++..++..|...|++|.+ +.|||++.
T Consensus 79 ~gg~sg~~~~~~A~~~I~sG~~--d~vLv~g~ 108 (386)
T PRK07855 79 YGGGAACATVQQAAMAVATGVA--DVVVCYRA 108 (386)
T ss_pred CCcHHHHHHHHHHHHHHHCCCC--CEEEEEee
Confidence 9999999999999999999987 99999876
No 123
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.43 E-value=1.3e-06 Score=81.26 Aligned_cols=96 Identities=14% Similarity=0.117 Sum_probs=78.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCC-CCchHHHHHHHHHhcCC-CCeeeeeccccCchHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGN-TDIEGVDSTNACYGGTAALFNC 131 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~l~~~l~~~g~-~~~~~~dv~~~C~g~~~aL~~A 131 (280)
+-++.+|+..+.+.+|++++++|++||.||++...+... -+..+-...-.. |+ ..++++-++..|++++.++..|
T Consensus 26 ~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~a---glp~~vp~~tvnr~C~Sgl~ai~~a 102 (417)
T PRK06025 26 HLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDA---GYDIKASGVTLDRFCGGGITSVNLA 102 (417)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhC---CCCCCCCeeeeccccchHHHHHHHH
Confidence 457899999999999999999999999999987654422 133443322222 44 3689999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.+.|++|.. +.+|..+.|.+|
T Consensus 103 a~~I~~G~~--~~~laGG~EsmS 123 (417)
T PRK06025 103 AAQIMSGME--DLVIAGGTEMMS 123 (417)
T ss_pred HHHHHcCCC--CEEEEeeeeccC
Confidence 999999965 899999999988
No 124
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.43 E-value=1e-05 Score=83.65 Aligned_cols=169 Identities=17% Similarity=0.144 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcc----EEEEecccCCCCCCc-------------------hHHHHHHHHHhcCCCCeeeee
Q 023575 60 MSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDKSKS-------------------IKTFLMQIFEKYGNTDIEGVD 116 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id----~li~~t~t~~~~~p~-------------------~a~~l~~~l~~~g~~~~~~~d 116 (280)
|..+.+-+||+++|++++.+. .|+.+.+..+|.... .+.++...|++.| +.+.
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G----Ps~~ 169 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG----PSVT 169 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCC----CCcc
Confidence 888999999999999999998 466666665554332 3445556666543 5788
Q ss_pred ccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc-------cc-------C--------CCCCcccCCceEEEEEC
Q 023575 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-------YA-------E--------GPARPTGGAAAVAMLIG 174 (280)
Q Consensus 117 v~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s-------~~-------~--------~~~~~~fGDgAaA~ll~ 174 (280)
|..+|++.+.|+++|.+.|+.|.+ .-+|+=+....- +. + ....++.|.|+++++|.
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~--d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLK 247 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGEC--DLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLK 247 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCC--CEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEE
Confidence 999999999999999999999965 666665554421 11 1 11346889999999998
Q ss_pred CCCC-----ceeecccccc----ccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCc
Q 023575 175 PDAP-----IAFESKLRGS----HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245 (280)
Q Consensus 175 ~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dI 245 (280)
+-.. ..|...+.++ +|..- .+..|. ..+-..+++ ++|+++|+++++|
T Consensus 248 rl~~A~~dgd~IyavI~gsavn~dG~~~-gltaP~-----------------~~aQ~~v~~------~al~~a~i~p~tv 303 (1061)
T COG3321 248 RLSDAERDGDRIYAVIRGSAVNQDGRSN-GLTAPN-----------------LEAQADVIR------EALADAGIDPATV 303 (1061)
T ss_pred EhHHHHhCCCeEEEEEEeeeeccCCCcC-CCCCCC-----------------HHHHHHHHH------HHHHhcCCCcccC
Confidence 6432 1222222222 11110 111111 112222333 3488999999999
Q ss_pred cEEecCCCChHHH
Q 023575 246 DYFVFHSPYNKLV 258 (280)
Q Consensus 246 d~~v~Hq~n~~~~ 258 (280)
+|+=.|..+..+-
T Consensus 304 ~yvEaHgTGT~lG 316 (1061)
T COG3321 304 QYVEAHGTGTPLG 316 (1061)
T ss_pred cEEEecCCCCCCc
Confidence 9999998665443
No 125
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.39 E-value=4.7e-06 Score=92.08 Aligned_cols=131 Identities=11% Similarity=0.049 Sum_probs=80.3
Q ss_pred HHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-c------cc-------------
Q 023575 97 KTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------YA------------- 156 (280)
Q Consensus 97 a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-s------~~------------- 156 (280)
+.+|...+++-| +++-+..+|++++.||+.|.+.|+.|.+ +.+|+-+++.. + +.
T Consensus 186 A~RIS~~f~L~G----ps~tVdtACsSSL~Al~~A~~~L~~G~~--D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crp 259 (2582)
T TIGR02813 186 SGRIANRFDLGG----MNCVVDAACAGSLAAIRMALSELLEGRS--EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQP 259 (2582)
T ss_pred HHHHHHHhCCCC----CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecceeeCCHHHHHHHHhccCcCCCCCccC
Confidence 344444444433 4678899999999999999999999976 88888887652 1 10
Q ss_pred --CCCCCcccCCceEEEEECCCCC-----ceeecccccc----ccccccccccCCCCCcccccCCcchHHHHHHHHHHHH
Q 023575 157 --EGPARPTGGAAAVAMLIGPDAP-----IAFESKLRGS----HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCY 225 (280)
Q Consensus 157 --~~~~~~~fGDgAaA~ll~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 225 (280)
.+...+++|+|++++||.+-+. ..|...+.++ ++.. ..+..| . ......++
T Consensus 260 FD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~-~~itaP-------~----------~~gq~~~i 321 (2582)
T TIGR02813 260 FDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKF-KSIYAP-------R----------PEGQAKAL 321 (2582)
T ss_pred CCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCC-CCCcCC-------C----------HHHHHHHH
Confidence 0123568899999999987432 1222211111 1110 011111 1 01111223
Q ss_pred HHHHHHHHhhhcCCCCccCccEEecCCCChHH
Q 023575 226 KYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKL 257 (280)
Q Consensus 226 ~~~~~~~~~L~~~gl~~~dId~~v~Hq~n~~~ 257 (280)
+ ++|+++|++++||+|+-.|-.+.+.
T Consensus 322 ~------~Al~~Agi~p~~I~yIeaHGTGT~~ 347 (2582)
T TIGR02813 322 K------RAYDDAGFAPHTCGLIEAHGTGTAA 347 (2582)
T ss_pred H------HHHHHcCCCHHHCCEEEecCCCCCC
Confidence 3 3488899999999999999755444
No 126
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=98.30 E-value=2.9e-06 Score=77.77 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=72.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+.++.+|+..|++.+++ |++ ++||.+|+++..+.. +..+..+ ....|++ .++++-++.+|++++.++..|.
T Consensus 22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~--~~~~r~~---~~~~Gl~~~~p~~tV~~~CaSG~~Ai~~a~ 93 (361)
T PRK06690 22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG--GNVARLS---ALEAGLGLHIPGVTIDRQCGAGLEAIRTAC 93 (361)
T ss_pred CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc--chHHHHH---HHHcCCCCCCCceehhhhhhHHHHHHHHHH
Confidence 35689999999999865 896 899999998765442 2222222 2334555 6889999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
++|++|.+ +.+|+++.|.+|
T Consensus 94 ~~I~sG~~--d~~l~gG~E~ms 113 (361)
T PRK06690 94 HFIQGGAG--KCYIAGGVESTS 113 (361)
T ss_pred HHHHCCCC--CEEEEecccccc
Confidence 99999976 999999999986
No 127
>PRK07937 lipid-transfer protein; Provisional
Probab=98.26 E-value=3.3e-06 Score=77.25 Aligned_cols=106 Identities=15% Similarity=0.145 Sum_probs=66.1
Q ss_pred eccCceeeecCCCCCCH-HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc
Q 023575 41 VGLGQDCMAFCSEVEDV-ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (280)
Q Consensus 41 ~~ig~r~~~~~~~~e~~-~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~ 119 (280)
.|+|...+....++.+. .+|+.+|+++||+++|++++|||.++.++ .+......-.+ ......+|... .+....
T Consensus 7 vG~g~t~~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~--~~~~~~~~~~~-~~~~~~~G~~~--~~~~~~ 81 (352)
T PRK07937 7 VGFAQAPHVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGS--SDYLAGRAFSF-ISAIDSIGAVP--PINESH 81 (352)
T ss_pred EEeeccccccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc--cccccccccch-hhHHhhccCCC--CCceEE
Confidence 45555443221112344 89999999999999999999999886432 22111110011 11223334311 122223
Q ss_pred cCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc
Q 023575 120 ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (280)
Q Consensus 120 ~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~ 153 (280)
-|+++..++..|...|++|.+ +.|||++.|+.
T Consensus 82 v~~~g~~a~~~A~~aI~sG~~--d~VLv~g~~k~ 113 (352)
T PRK07937 82 VEMDAAWALYEAWVKLLTGEV--DTALVYGFGKS 113 (352)
T ss_pred ecCcHHHHHHHHHHHHhcCCC--CEEEEEEeccc
Confidence 334688899999999999987 99999998853
No 128
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=98.21 E-value=1.7e-06 Score=69.46 Aligned_cols=46 Identities=22% Similarity=0.279 Sum_probs=38.3
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhh--------hhhhc---cCCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFF--------NDFLR---NASLPSI 279 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~--------~~~~~---NtssasI 279 (280)
.|++.|++..|+.+|++|+++++|++.+.+.|++ +++++ ||||+||
T Consensus 49 ~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTV 105 (151)
T PF02797_consen 49 LLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATV 105 (151)
T ss_dssp HHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHH
T ss_pred HHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcch
Confidence 3889999987888999999999999999999987 34555 9999987
No 129
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=98.20 E-value=3.6e-06 Score=72.20 Aligned_cols=110 Identities=20% Similarity=0.180 Sum_probs=84.6
Q ss_pred CeeeeccCceeeecCC--CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeee
Q 023575 37 GKYTVGLGQDCMAFCS--EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114 (280)
Q Consensus 37 ~~~~~~ig~r~~~~~~--~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~ 114 (280)
+.+..|+|..++--+. ++-+-.||+.+|..++|+++++.-++|+.-+++-..++..... +++-..|.+.++.
T Consensus 7 rvyvvgvgmtkf~kpg~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgq------raiyevgmtgipi 80 (408)
T KOG1406|consen 7 RVYVVGVGMTKFEKPGRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQ------RAIYEVGMTGIPI 80 (408)
T ss_pred eEEEEecceeeecCCCcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccch------HHHHhccccCcce
Confidence 3455677776643322 2445689999999999999999999999877666555532221 2333456677889
Q ss_pred eeccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc
Q 023575 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 115 ~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
|+++++|+++.+||..|++++++|.. +.||-.+-|++.
T Consensus 81 ~nvnnncatgssalflakqiiesgn~--dcvlalgfekm~ 118 (408)
T KOG1406|consen 81 YNVNNNCATGSSALFLAKQIIESGNS--DCVLALGFEKME 118 (408)
T ss_pred eeccCccccCchHHHHHHHHHhcCCc--ceEEeechhhhC
Confidence 99999999999999999999999965 999999999874
No 130
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.65 E-value=0.00017 Score=67.04 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCccEEEEecccCCC-CCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~a--gi~~~~Id~li~~t~t~~~-~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
..++.....+..+++. ++++.+||.+++++..+.. ..+..+..+...+ |++ +++++.++.+|++++.++..|.
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~a---Gl~~~~p~~~V~~~c~SG~~Av~~A~ 103 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAA---GLPGSVPAVTVNRACASGLAAVRLAA 103 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHc---CCCCCCCceEEeccchhHHHHHHHHH
Confidence 4445544444444332 4666678888887554442 2344554444444 444 4889999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..|++|.+ +.+|+++.|++|
T Consensus 104 ~~I~sG~~--dvvlagG~E~mS 123 (392)
T COG0183 104 QAIASGEA--DVVLAGGVEKMS 123 (392)
T ss_pred HHHHCCCC--CEEEEEeeeecc
Confidence 99999976 999999999987
No 131
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.55 E-value=0.00046 Score=61.82 Aligned_cols=227 Identities=14% Similarity=0.141 Sum_probs=125.7
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhh----CCCC----C--eeee-ccCceee-----ecCCCC----CCHHHHHHHH
Q 023575 5 HPKNVGILALDIYFPPTCVLQEALEVHD----GVSK----G--KYTV-GLGQDCM-----AFCSEV----EDVISMSLTV 64 (280)
Q Consensus 5 ~~~~~~I~~ig~~lP~~~v~~~~~~~~~----g~~~----~--~~~~-~ig~r~~-----~~~~~~----e~~~~la~~A 64 (280)
+++.|.|.|+|...|=-.=....|.... |+.. + .+-. -.|.-.+ ++...+ .+...|++.|
T Consensus 22 ~~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~a 101 (440)
T KOG1394|consen 22 RMRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTA 101 (440)
T ss_pred cceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHH
Confidence 3567999999999998654444444322 2211 1 1111 1111110 011111 1357899999
Q ss_pred HHHHHHHcCCCCC---Ccc----EEEEecccC---------------------CCCCCc-----hHHHHHHHHHhcCCCC
Q 023575 65 VTSLLEKYKIDPT---QIG----RLEVGSETV---------------------IDKSKS-----IKTFLMQIFEKYGNTD 111 (280)
Q Consensus 65 a~~aL~~agi~~~---~Id----~li~~t~t~---------------------~~~~p~-----~a~~l~~~l~~~g~~~ 111 (280)
+++||+++++.+. +.| .|.++|.-+ ++.+|- .+.+|...+++.|
T Consensus 102 a~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~G--- 178 (440)
T KOG1394|consen 102 AEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRG--- 178 (440)
T ss_pred HHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcC---
Confidence 9999999998665 222 222333211 112331 2334444444433
Q ss_pred eeeeeccccCchHHHHHHHHHHHHHhcCCCCCeEEEE-Eecccc-------c---------cCC-----------CCCcc
Q 023575 112 IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVV-CTDSAV-------Y---------AEG-----------PARPT 163 (280)
Q Consensus 112 ~~~~dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv-~~e~~s-------~---------~~~-----------~~~~~ 163 (280)
+...++.+|+.+.+++--|.++|+.|. ..++|. ++|.+- | .+. .+.++
T Consensus 179 -pnhsvSTACATg~h~igda~n~Ir~Gd---aDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFV 254 (440)
T KOG1394|consen 179 -PNHSVSTACATGNHCIGDAFNFIRLGD---ADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFV 254 (440)
T ss_pred -CchhhHhhhhhccchHHHHHHHHHhCc---cceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCcee
Confidence 345678899999999999999999994 345554 455531 1 111 13568
Q ss_pred cCCceEEEEECCCCC-----ceeecccccc-ccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhc
Q 023575 164 GGAAAVAMLIGPDAP-----IAFESKLRGS-HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEG 237 (280)
Q Consensus 164 fGDgAaA~ll~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~ 237 (280)
.|.|++.+||+.-+- ..|...+++. .+.+.+.+..| ..||. ....+++ .+|+.
T Consensus 255 mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P-------~~dG~--------Ga~~am~------raL~~ 313 (440)
T KOG1394|consen 255 MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSP-------DPDGA--------GAVLAME------RALKD 313 (440)
T ss_pred eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCC-------CCCcc--------hHHHHHH------HHHHH
Confidence 899999999986431 2343322221 11122222222 23342 1111233 23888
Q ss_pred CCCCccCccEEecCCCChHHHH
Q 023575 238 RQFSMLDVDYFVFHSPYNKLVQ 259 (280)
Q Consensus 238 ~gl~~~dId~~v~Hq~n~~~~~ 259 (280)
+|++++||||+--|--+...-+
T Consensus 314 Agl~pe~i~YvNAHATST~~GD 335 (440)
T KOG1394|consen 314 AGLSPEDIDYVNAHATSTPLGD 335 (440)
T ss_pred cCCChhhcCeeecccccCcCch
Confidence 9999999999999976655444
No 132
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.00 E-value=0.0015 Score=57.73 Aligned_cols=96 Identities=9% Similarity=0.157 Sum_probs=72.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC-CeeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~-~~~~~dv~~~C~g~~~aL~~A~ 132 (280)
.-.+.+|+.-|++.+|++++++++|++-+|++..-.-..--.++- |-.|+. |++ .++|.-++--|++++-|+.+|.
T Consensus 27 sl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaR--QaalgA-Glp~sv~~tTvNkvCaSgmKAv~laa 103 (396)
T KOG1390|consen 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPAR--QAALGA-GLPYSVPATTVNKVCASGMKAVILAA 103 (396)
T ss_pred cCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHH--HHHhhc-CCCcceeeEeehhhhhhhHHHHHHHH
Confidence 356889999999999999999999999999876433322111222 124433 444 6889999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
+-|+.|.+ +.++.-+.|.+|
T Consensus 104 QsI~~G~~--divVaGGmEsMS 123 (396)
T KOG1390|consen 104 QSIQTGHA--DIVVAGGMESMS 123 (396)
T ss_pred HHHhcCCc--cEEEecccchhc
Confidence 99999954 666666778776
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.42 E-value=0.0047 Score=53.21 Aligned_cols=97 Identities=10% Similarity=0.110 Sum_probs=71.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHh-cCC-CCeeeeeccccCchHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK-YGN-TDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~-~g~-~~~~~~dv~~~C~g~~~aL~~ 130 (280)
.+-++.+|.+-|++.+|+.+++.++.||.+|++..-.. .+.+.|+.+..++ .|. ...+++-++-=|.++..++..
T Consensus 24 Kg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aS---SsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVN 100 (396)
T KOG1391|consen 24 KGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLAS---SSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVN 100 (396)
T ss_pred cCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeec---cCCceEeeeccccccCCcCccCceeehhhhcccHHHHHh
Confidence 35678999999999999999999999999996542111 1122233334443 233 357888999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
+++-+.-|.. +-||-=+.|.+|
T Consensus 101 gaQ~I~vgea--~ivL~GGtEnMS 122 (396)
T KOG1391|consen 101 GAQEICVGEA--EIVLCGGTENMS 122 (396)
T ss_pred hHHHhhcCcc--eEEEecCccccc
Confidence 9999999854 666666678776
No 134
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=95.87 E-value=0.18 Score=42.93 Aligned_cols=116 Identities=16% Similarity=0.126 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCC---------------CCCc-hHHHHHHHH-HhcC---CCCeeee
Q 023575 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID---------------KSKS-IKTFLMQIF-EKYG---NTDIEGV 115 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~---------------~~p~-~a~~l~~~l-~~~g---~~~~~~~ 115 (280)
...-|++.++..++++. +++|.+|++|..|+. ..|. ...-||+.. +... ..+.+..
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 36789999999988653 578899999977652 2232 011122211 1111 1234556
Q ss_pred eccccCchHHHHHHHHHHHHHhcCCCCCeEEEEEecccc---ccCC-CCCcccCCceEEEEECCCCC
Q 023575 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV---YAEG-PARPTGGAAAVAMLIGPDAP 178 (280)
Q Consensus 116 dv~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s---~~~~-~~~~~fGDgAaA~ll~~~~~ 178 (280)
-+..+=.+|-.||..|..+++.| . +.||||+.|... |... +......--|.|++|++++.
T Consensus 109 al~a~~~sf~~aLleA~~~l~~~-~--~~VLlv~~De~~p~~y~~~~~~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 109 ALAAGEDSFEAALLEAAAQLAEG-A--EPVLLVCYDEPLPEPYQEFRPERDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEecCcchHHHHHHHHHHHHHcC-C--CCEEEEEeCCCCChhhhhcccccCCCcCEEEEEEecCCCC
Confidence 67778889999999999999998 4 999999999864 3222 22333345677888887654
No 135
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.48 E-value=0.0086 Score=52.39 Aligned_cols=94 Identities=15% Similarity=0.105 Sum_probs=68.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCC-CCeeeeeccccCchHHHHHHHHHHH
Q 023575 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIEGVDSTNACYGGTAALFNCVNW 134 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~-~~~~~~dv~~~C~g~~~aL~~A~~~ 134 (280)
-+-||+.+|...+|++..++.+.||+||++|.-.+.-....+-.. .| ..|+ ..+++.-+..+|-+.-.|+.+...+
T Consensus 65 mphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniarea--al-~agfsdktpahtvtmacissn~amttgmgl 141 (465)
T KOG1392|consen 65 MPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREA--AL-LAGFSDKTPAHTVTMACISSNVAMTTGMGL 141 (465)
T ss_pred chhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHH--HH-hcCCCCCCccceeeeehhccchhhhcccee
Confidence 467999999999999999999999999999865543222222211 11 1244 3578888999999999999999999
Q ss_pred HHhcCCCCCeEEEEEecccc
Q 023575 135 VESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 135 l~~g~~~~~~vLvv~~e~~s 154 (280)
|++|.+ +.++-=+.|.+|
T Consensus 142 iatg~~--dvivaggvelms 159 (465)
T KOG1392|consen 142 IATGNA--DVIVAGGVELMS 159 (465)
T ss_pred EeeCCc--CEEEEcceeecc
Confidence 999964 333333446554
No 136
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=95.27 E-value=0.052 Score=48.13 Aligned_cols=96 Identities=17% Similarity=0.271 Sum_probs=74.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCC-eeeeeccccCchHHHHHHHHH
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IEGVDSTNACYGGTAALFNCV 132 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~-~~~~dv~~~C~g~~~aL~~A~ 132 (280)
+...-+|-..+.+..+++.+++|+.|+-|+++++-.+.. ....+.++... .|++. ++..-++--|++++.++.-.+
T Consensus 58 dt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~--ag~P~tvpv~tvNRqCsSGLqaVadiA 134 (435)
T KOG1389|consen 58 DTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFY--AGFPETVPVRTVNRQCSSGLQAVADIA 134 (435)
T ss_pred cCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHH--cCCCcccchhhhhhhhhhHHHHHHHHH
Confidence 455678999999999999999999999999999866532 34555544433 35553 444446679999999999999
Q ss_pred HHHHhcCCCCCeEEEEEecccc
Q 023575 133 NWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~e~~s 154 (280)
.-|++|.| +--|-.+.|.++
T Consensus 135 ~~Ir~G~y--dIGla~GvESMt 154 (435)
T KOG1389|consen 135 AKIRAGFY--DIGLAAGVESMT 154 (435)
T ss_pred HHHhcCce--eeecccchhhhc
Confidence 99999977 878888888775
No 137
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=95.22 E-value=0.016 Score=54.19 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=35.8
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhc-cCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLR-NASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~-Ntssa 277 (280)
+|+++|++++|||+|-+|+++.......++++++.. .+ |++.-
T Consensus 324 aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~-~~vN~~GG 367 (417)
T PRK06025 324 VLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDR-DKVNVNGG 367 (417)
T ss_pred HHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCCh-hhccccCC
Confidence 388999999999999999999999889999998643 33 66543
No 138
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=95.09 E-value=0.023 Score=52.31 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=32.5
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~ 268 (280)
+|+++|++++|||+|-+||++........+.+++.
T Consensus 267 al~~Agl~~~Did~~ei~eafa~~~~~~~e~lgl~ 301 (361)
T PRK06690 267 LLNEMNMKVEDIDYFEINEAFASKVVACAKELQIP 301 (361)
T ss_pred HHHHcCCCHHHcCEeeecchhHHHHHHHHHhcCCC
Confidence 48999999999999999999999999999999974
No 139
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.25 E-value=0.038 Score=39.95 Aligned_cols=73 Identities=16% Similarity=0.088 Sum_probs=38.9
Q ss_pred HHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeee-e---ccc-cCchHHHHHHHHHHHHHhcCCCCC
Q 023575 69 LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV-D---STN-ACYGGTAALFNCVNWVESASWDGR 143 (280)
Q Consensus 69 L~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~-d---v~~-~C~g~~~aL~~A~~~l~~g~~~~~ 143 (280)
|+++|++++|||.+++...+.. ... ...+.+|.+.-..+ + .++ +|++-..+|..+..-=+-. +++
T Consensus 1 L~~~g~~~~did~~i~hq~~~~-----~~~---~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~--~Gd 70 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKK-----ILD---SIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIK--PGD 70 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHH-----HHH---HHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSC--TTE
T ss_pred CccccCCHHHCCEEEeCCCCHH-----HHH---HHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCC--CCC
Confidence 7899999999999997753322 222 23344454321221 2 333 7777777776665511112 447
Q ss_pred eEEEEEec
Q 023575 144 YGLVVCTD 151 (280)
Q Consensus 144 ~vLvv~~e 151 (280)
++|+++.-
T Consensus 71 ~vl~~~~G 78 (90)
T PF08541_consen 71 RVLLVGFG 78 (90)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 88888653
No 140
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=94.24 E-value=0.15 Score=46.62 Aligned_cols=91 Identities=11% Similarity=-0.042 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEe-cccCCCCCCchHHHHHHHHHhcCCCCee----eeeccc-cCchHHHHHHHHHH
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVG-SETVIDKSKSIKTFLMQIFEKYGNTDIE----GVDSTN-ACYGGTAALFNCVN 133 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~-t~t~~~~~p~~a~~l~~~l~~~g~~~~~----~~dv~~-~C~g~~~aL~~A~~ 133 (280)
=..++.+++|+++|++|+|||+|+.. +.++. ....-...+.+.++... ...+ .--++. +.+++...+..+..
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~-~d~~e~~A~~~~f~~~~-~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQY-RFKEAALAEMRLFRVRK-EFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCcc-chHHHHHHHHHHhhhcc-CCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 34588999999999999999999843 33322 11111222233333211 1111 112332 44555555556666
Q ss_pred HHHhcCCCCCeEEEEEecc
Q 023575 134 WVESASWDGRYGLVVCTDS 152 (280)
Q Consensus 134 ~l~~g~~~~~~vLvv~~e~ 152 (280)
.++.|..|+.++||.+++-
T Consensus 313 ~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HHHcCcCCCCcEEEEecCC
Confidence 6777765678899988764
No 141
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.47 E-value=0.23 Score=45.93 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHh--cCCC--Cee-ee-eccc-cCchHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK--YGNT--DIE-GV-DSTN-ACYGGTAALFNC 131 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~--~g~~--~~~-~~-dv~~-~C~g~~~aL~~A 131 (280)
+...++.+++|+++|+.++|||.++....+.. .--.+.+.|+. +|++ +.+ .+ ++++ +|++...+|..+
T Consensus 272 ~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~-----~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 272 VYTIKPLLELVDKRNLDPDDIDYFLPHYSSEY-----FREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDEL 346 (378)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEeeCcccHH-----HHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHH
Confidence 45578889999999999999999986543222 22233344421 1432 222 22 2444 888888888877
Q ss_pred HHHHHhcCC-CCCeEEEEEecccc
Q 023575 132 VNWVESASW-DGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~-~~~~vLvv~~e~~s 154 (280)
.. .|.. +++++|+++++...
T Consensus 347 ~~---~g~~~~Gd~vl~~~~~s~~ 367 (378)
T PRK06816 347 LN---SGRLKPGQKILCFVPESGR 367 (378)
T ss_pred HH---cCCCCCCCEEEEEEecccc
Confidence 43 3321 45888888777653
No 142
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=92.90 E-value=0.32 Score=45.10 Aligned_cols=35 Identities=11% Similarity=0.161 Sum_probs=31.5
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~ 268 (280)
+|+++|++++|||++-+|-+...+.-..++.|||.
T Consensus 266 al~~Agi~~~DiD~~ei~d~ft~~~l~~le~lGl~ 300 (385)
T PRK12578 266 AYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFT 300 (385)
T ss_pred HHHHcCCCHHHCCEEEecCcChHHHHHHHHHcCCC
Confidence 38899999999999999999998888889999874
No 143
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=92.84 E-value=0.21 Score=45.56 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-ee---eccc-cCchHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-GV---DSTN-ACYGGTAALF 129 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-~~---dv~~-~C~g~~~aL~ 129 (280)
....+.++++++|+++|++++|||.+++....+. .+....+.+|.+ +.+ .+ ++++ ++++...+|.
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~--------~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~ 277 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGK--------FYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLS 277 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChH--------HHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHH
Confidence 5566778999999999999999999987642222 222344445543 222 11 4555 8888888998
Q ss_pred HHHHHHHhcCCCCCeEEEEE
Q 023575 130 NCVNWVESASWDGRYGLVVC 149 (280)
Q Consensus 130 ~A~~~l~~g~~~~~~vLvv~ 149 (280)
.+...++ +++++|+++
T Consensus 278 ~~~~~~~----~Gd~vll~~ 293 (345)
T TIGR00748 278 AVLDIAE----PGDRILAVS 293 (345)
T ss_pred HHHHhcC----CCCEEEEEE
Confidence 7765443 447777754
No 144
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=92.13 E-value=0.19 Score=46.73 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=32.7
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhc-cCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLR-NASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~-Ntssa 277 (280)
+|+++|++++|||++-+|-...-......+.||+.. .. |+++-
T Consensus 300 al~~agl~~~dId~~e~~d~f~~~~~~~~e~lg~~~-~~vn~~Gg 343 (393)
T PRK05656 300 CLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDA-AKVNVNGG 343 (393)
T ss_pred HHHHcCCCHHHCCEEEecCccHHHHHHHHHHhCCCC-ccCCcCCC
Confidence 388999999999999999887666667778888642 22 66553
No 145
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=91.74 E-value=0.37 Score=44.65 Aligned_cols=44 Identities=11% Similarity=0.115 Sum_probs=33.1
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssa 277 (280)
+|+++|++++|||++-+|-..........+.+|+....-|++.-
T Consensus 294 a~~~Agi~~~did~~e~~d~f~~~~~~~~e~lg~~~~pvn~~GG 337 (386)
T cd00751 294 ALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGG 337 (386)
T ss_pred HHHHcCCCHHHcCEEEeechhHHHHHHHHHHhCCChhhcCCCcc
Confidence 37889999999999999988776555667788875533366543
No 146
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=91.46 E-value=0.56 Score=43.54 Aligned_cols=35 Identities=9% Similarity=0.131 Sum_probs=31.0
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~ 268 (280)
+|+++|++++|||++-+|-+.....-...+.|||.
T Consensus 269 a~~~agl~~~did~~e~~d~f~~~~~~~~e~lg~~ 303 (389)
T PRK07516 269 ALAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLA 303 (389)
T ss_pred HHHHcCCCHHHCCEEEEecCCCHHHHHHHHHcCCC
Confidence 37889999999999999999988877888888874
No 147
>PRK08256 lipid-transfer protein; Provisional
Probab=91.39 E-value=0.81 Score=42.54 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=31.8
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhh
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~ 268 (280)
+++++|++++|||.+-+|.+.....-..++.|||.
T Consensus 273 a~~~ag~~~~DiD~~ei~d~f~~~~l~~le~lg~~ 307 (391)
T PRK08256 273 VYEQAGIGPEDIDVVELHDCFSANELLTYEALGLC 307 (391)
T ss_pred HHHHcCCCHHHCCEEeeccCCcHHHHHHHHHcCCC
Confidence 37889999999999999999998888899999874
No 148
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=91.24 E-value=0.32 Score=37.11 Aligned_cols=77 Identities=13% Similarity=0.145 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEe-cccCCCCCCchHHHHHHHHHhcC-CCCeeeee----ccc-cCchHHHHHHHHHH
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVG-SETVIDKSKSIKTFLMQIFEKYG-NTDIEGVD----STN-ACYGGTAALFNCVN 133 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~-t~t~~~~~p~~a~~l~~~l~~~g-~~~~~~~d----v~~-~C~g~~~aL~~A~~ 133 (280)
..++.+++|+++|++|+|||+|... +.++. ..+.-..-+.++++... ...++.-- ++. ..++++..|..+.-
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~-~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPL-GDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHH-HHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeecccccc-chhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 3688999999999999999999843 33332 22334444555555432 11122222 232 56677777777777
Q ss_pred HHHhc
Q 023575 134 WVESA 138 (280)
Q Consensus 134 ~l~~g 138 (280)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 77665
No 149
>PRK04262 hypothetical protein; Provisional
Probab=91.03 E-value=0.52 Score=42.98 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Ceee-e---eccc-cCchHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIEG-V---DSTN-ACYGGTAALFN 130 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~~-~---dv~~-~C~g~~~aL~~ 130 (280)
.....++.+++|+++|++++|||.+++..... ..+....+.+|++ +... + ++++ ++++-..+|..
T Consensus 208 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~--------~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~ 279 (347)
T PRK04262 208 FKHIISAAKGLMEKLGLKPSDYDYAVFHQPNG--------KFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAA 279 (347)
T ss_pred HHHHHHHHHHHHHHhCcCHHHhceeecCCCch--------HHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHH
Confidence 35677889999999999999999998763221 1222344445543 2221 1 3444 77777777776
Q ss_pred HHHHHHhcCCCCCeEEEE
Q 023575 131 CVNWVESASWDGRYGLVV 148 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv 148 (280)
+..-+ . +++++|++
T Consensus 280 ~~~~~--~--~Gd~vll~ 293 (347)
T PRK04262 280 VLDVA--K--PGDRILVV 293 (347)
T ss_pred HHHhC--C--CCCEEEEE
Confidence 65422 2 44777764
No 150
>PRK05790 putative acyltransferase; Provisional
Probab=90.51 E-value=0.62 Score=43.31 Aligned_cols=44 Identities=16% Similarity=0.108 Sum_probs=33.9
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssa 277 (280)
+|+++|++++|||++-+|-...-..-..++.+|+....-|+++-
T Consensus 300 a~~~Agi~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG 343 (393)
T PRK05790 300 ALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGG 343 (393)
T ss_pred HHHHcCCCHHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCCcc
Confidence 37899999999999999988766666677888876433277654
No 151
>PRK09051 beta-ketothiolase; Provisional
Probab=90.29 E-value=0.56 Score=43.69 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=33.5
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssa 277 (280)
+|+++|++++|||+|=+|-+..-......+.||+....-|++.-
T Consensus 301 al~~agi~~~did~~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG 344 (394)
T PRK09051 301 ALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGS 344 (394)
T ss_pred HHHHcCCCHHHcCEEEecCccHHHHHHHHHHhCCCccccCCCcc
Confidence 48899999999999999988766666677888874322266654
No 152
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.06 E-value=0.53 Score=42.61 Aligned_cols=83 Identities=11% Similarity=0.064 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Ce-eeee-ccc-cCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DI-EGVD-STN-ACYGGTAALFNCV 132 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~-~~~d-v~~-~C~g~~~aL~~A~ 132 (280)
.....++.+++|+++|++++|||.+++...... .-.. ..+.+|++ +. ..++ .++ ++++...+|..+.
T Consensus 238 ~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~-----~~~~---~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~ 309 (338)
T PRK09258 238 VELAVDTWEAFLAQLGWAVEQVDRVICHQVGAA-----HTRA---ILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAA 309 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHH-----HHHH---HHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHH
Confidence 355667888999999999999999987653322 2223 33334442 22 1222 333 6666667776653
Q ss_pred HHHHhcCC-CCCeEEEEEec
Q 023575 133 NWVESASW-DGRYGLVVCTD 151 (280)
Q Consensus 133 ~~l~~g~~-~~~~vLvv~~e 151 (280)
+.|.. +++++|+++..
T Consensus 310 ---~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 310 ---EEGFLKPGDRVALLGIG 326 (338)
T ss_pred ---HhCCCCCCCEEEEEEec
Confidence 34321 45788887643
No 153
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=90.05 E-value=1.4 Score=39.44 Aligned_cols=78 Identities=10% Similarity=-0.031 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeee----eeccc-cCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG----VDSTN-ACYGGTAALFNCV 132 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~----~dv~~-~C~g~~~aL~~A~ 132 (280)
.+...++++++|+++|++++|||+++..........+-.... .+...+...... -.+++ ++++.+..|..+.
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~---~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~ 280 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKL---LRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAV 280 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHH---HHHHhCCCCceeECCCcccccchhHhHHHHHHHHH
Confidence 345568999999999999999999997654433222211111 112222111111 23454 7777888888877
Q ss_pred HHHHhc
Q 023575 133 NWVESA 138 (280)
Q Consensus 133 ~~l~~g 138 (280)
..++.+
T Consensus 281 ~~~~~~ 286 (332)
T cd00825 281 LMLEHG 286 (332)
T ss_pred HHHhcC
Confidence 766655
No 154
>PLN02287 3-ketoacyl-CoA thiolase
Probab=89.99 E-value=0.33 Score=46.09 Aligned_cols=44 Identities=11% Similarity=0.133 Sum_probs=32.9
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssa 277 (280)
+|+++|++++|||++=+|-+..-..-..++.||+....=|+++-
T Consensus 340 al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG 383 (452)
T PLN02287 340 AVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGG 383 (452)
T ss_pred HHHHcCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCc
Confidence 48899999999999999977766666667888875322266653
No 155
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=89.94 E-value=3.5 Score=35.25 Aligned_cols=77 Identities=13% Similarity=-0.015 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHh--cCCC----Ceeeeeccc-cCchHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK--YGNT----DIEGVDSTN-ACYGGTAALF 129 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~--~g~~----~~~~~dv~~-~C~g~~~aL~ 129 (280)
......++.+++|+++|++++|||.++............. ..++. .+.. ....-.+++ ++++++..|.
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~ 217 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVE-----LALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILD 217 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHH-----HHHHHHHhCCCCCceeccccccccchHHHHHHHHH
Confidence 3456778999999999999999999986543333222211 12221 1111 111123444 6666677777
Q ss_pred HHHHHHHhc
Q 023575 130 NCVNWVESA 138 (280)
Q Consensus 130 ~A~~~l~~g 138 (280)
.+...++.+
T Consensus 218 ~~~~~~~~~ 226 (254)
T cd00327 218 ELLLMLEHE 226 (254)
T ss_pred HHHHHHhCC
Confidence 666655544
No 156
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=89.80 E-value=2.1 Score=41.20 Aligned_cols=68 Identities=10% Similarity=-0.117 Sum_probs=41.3
Q ss_pred cccHHHHHHhhCCCC-Ceee-eccCceee--ecCC-CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccC
Q 023575 22 CVLQEALEVHDGVSK-GKYT-VGLGQDCM--AFCS-EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETV 89 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~-~~~~-~~ig~r~~--~~~~-~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~ 89 (280)
.++.++.++.++.+. +++. .+.+..+- .+.. ++-........|+++|++++|++++|||++=+.+|.+
T Consensus 250 il~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~ 322 (498)
T PRK08257 250 LLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFP 322 (498)
T ss_pred EEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCH
Confidence 567777777777653 3332 34333211 1111 1111233345799999999999999999998776543
No 157
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=89.78 E-value=0.82 Score=42.73 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=34.3
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhc-cCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLR-NASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~-Ntssa 277 (280)
+|+++|++++|||+|=+|-+..-..-..++.||+.. .. |+++-
T Consensus 309 al~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~-~~vN~~GG 352 (402)
T PRK08242 309 ALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPH-DKVNVNGG 352 (402)
T ss_pred HHHHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCC-cCCCcCCC
Confidence 488999999999999999998877777888888643 23 66553
No 158
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=89.74 E-value=1.1 Score=41.76 Aligned_cols=46 Identities=20% Similarity=0.217 Sum_probs=37.9
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhh--hc-cCCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDF--LR-NASLPSI 279 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~--~~-NtssasI 279 (280)
+|+++|++++|||++=+|-+..-..-..++.|||.+- .. |++.-.+
T Consensus 291 al~~Agl~~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~l 339 (387)
T PRK08947 291 ALKRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAI 339 (387)
T ss_pred HHHHcCCCHHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCCCchh
Confidence 4889999999999999999998888888999998553 33 8776443
No 159
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=89.71 E-value=0.77 Score=42.74 Aligned_cols=44 Identities=11% Similarity=0.128 Sum_probs=33.8
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssa 277 (280)
+|+++|++++|||+|-+|-+..-..-..++.||+....-|+++-
T Consensus 298 al~~agl~~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~~GG 341 (391)
T PRK07661 298 ALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGG 341 (391)
T ss_pred HHHHcCCCHHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCCCCC
Confidence 48899999999999999988877777777888874322266553
No 160
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=89.58 E-value=0.33 Score=45.25 Aligned_cols=45 Identities=11% Similarity=0.108 Sum_probs=34.1
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLPS 278 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssas 278 (280)
+|+++|++++|||+|=+|-+.....-..++.|||....-|+++-.
T Consensus 304 al~~agl~~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~ 348 (397)
T PRK06954 304 LFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGA 348 (397)
T ss_pred HHHHcCCCHHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcCCCh
Confidence 488999999999999999887776666678888754222776644
No 161
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.43 E-value=0.63 Score=42.89 Aligned_cols=84 Identities=13% Similarity=0.197 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Ce-eeee-ccc-cCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DI-EGVD-STN-ACYGGTAALFNCV 132 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~-~~~d-v~~-~C~g~~~aL~~A~ 132 (280)
.+...++.+++|+++|++++|||++++.-.... -....+.+.++. +.+ +. ..++ .++ +|++...+|..+.
T Consensus 270 ~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~----~~d~~~~~llg~-~~~~~~~~~~~~~~GNt~sasi~~~L~~~~ 344 (372)
T PRK07515 270 CPMVAEHIVEHLAENGLTPADVKRFWLHQANIN----MNQLIGKKVLGR-DATPEEAPVILDEYANTSSAGSIIAFHKHS 344 (372)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhccC-CCChhhceEeHHhcCCchhhHHHHHHHHHh
Confidence 445678999999999999999999987643222 111222222332 111 11 1223 444 8888888888875
Q ss_pred HHHHhcCCCCCeEEEEEe
Q 023575 133 NWVESASWDGRYGLVVCT 150 (280)
Q Consensus 133 ~~l~~g~~~~~~vLvv~~ 150 (280)
.-++ +++++|+++.
T Consensus 345 ~~~~----~Gd~vll~~~ 358 (372)
T PRK07515 345 DDLA----AGDLGVICSF 358 (372)
T ss_pred ccCC----CCCEEEEEEe
Confidence 4332 4478877764
No 162
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=88.99 E-value=1 Score=41.83 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=37.7
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhh--hc-cCCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDF--LR-NASLPSI 279 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~--~~-NtssasI 279 (280)
+|+++|++++|||++=+|-+..-..-..++.|||.+- .. |++.-.|
T Consensus 289 al~~AGi~p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG~l 337 (385)
T TIGR02445 289 ALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAI 337 (385)
T ss_pred HHHHcCCCHHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCchh
Confidence 3889999999999999999998888888999998543 34 8776544
No 163
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=88.76 E-value=0.6 Score=43.44 Aligned_cols=45 Identities=9% Similarity=0.037 Sum_probs=35.8
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLPS 278 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssas 278 (280)
+|+++|++++|||.|=+|-+..-..-..++.|||..-.-|++.-.
T Consensus 297 a~~~agl~~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~GG~ 341 (390)
T PRK06504 297 ALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGA 341 (390)
T ss_pred HHHHcCCCHHHCCEEEecccchHHHHHHHHHhCCCCCCcCCCCcH
Confidence 488999999999999999998888888889999753211666543
No 164
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=88.62 E-value=0.61 Score=42.09 Aligned_cols=80 Identities=11% Similarity=0.088 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-eee-ccc-cCchHHHHHHHHHHH
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-GVD-STN-ACYGGTAALFNCVNW 134 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-~~d-v~~-~C~g~~~aL~~A~~~ 134 (280)
...++.+++|+++|++++|||++++...... .-. ...+.+|++ +.. .++ .++ +|++...+|..+
T Consensus 227 ~~~~~i~~~L~~~g~~~~did~~~~hq~~~~-----~~~---~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~--- 295 (326)
T CHL00203 227 QVPAVIIKCLNALNISIDEVDWFILHQANKR-----ILE---AIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA--- 295 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHH---HHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---
Confidence 3556789999999999999999987643322 222 233344443 221 122 333 666777777655
Q ss_pred HHhcCC-CCCeEEEEEe
Q 023575 135 VESASW-DGRYGLVVCT 150 (280)
Q Consensus 135 l~~g~~-~~~~vLvv~~ 150 (280)
++.|.. +++++|+++.
T Consensus 296 ~~~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 296 IQNNKIQPGQIIVLSGF 312 (326)
T ss_pred HHhCCCCCCCEEEEEEE
Confidence 344422 4578887763
No 165
>PRK06840 hypothetical protein; Validated
Probab=87.94 E-value=3.6 Score=37.22 Aligned_cols=80 Identities=20% Similarity=0.215 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Ceeee-eccc-cCchHHHHHHHHHHHH
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIEGV-DSTN-ACYGGTAALFNCVNWV 135 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~~~-dv~~-~C~g~~~aL~~A~~~l 135 (280)
...++.+++|+++|++++|||.++..... +. .+....+.+|++ +...+ ++++ ++++.+..|..+ +
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~~~-----~~---~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~ 306 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILHMK-----RS---AHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---L 306 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCcC-----HH---HHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---H
Confidence 35588999999999999999998764321 11 222344455553 22222 2333 666666666544 4
Q ss_pred HhcCC-CCCeEEEEEe
Q 023575 136 ESASW-DGRYGLVVCT 150 (280)
Q Consensus 136 ~~g~~-~~~~vLvv~~ 150 (280)
+.+.. +++++|+++.
T Consensus 307 ~~~~~~~Gd~ill~~~ 322 (339)
T PRK06840 307 EQGKLKDGDLVVLVSA 322 (339)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 44421 4577887764
No 166
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.76 E-value=0.76 Score=41.25 Aligned_cols=80 Identities=19% Similarity=0.039 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-ee-eccc-cCchHHHHHHHHHHH
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-GV-DSTN-ACYGGTAALFNCVNW 134 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-~~-dv~~-~C~g~~~aL~~A~~~ 134 (280)
...++.+++|+++|++++|||.+++.... +..... ..+.+|++ +.. .+ ++++ +|++...+|..+
T Consensus 226 ~~~~~i~~~L~~~g~~~~did~~~~h~~~-----~~~~~~---~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 294 (325)
T PRK12879 226 TMPKGARQVLEKAGLTKDDIDWVIPHQAN-----LRIIES---LCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA--- 294 (325)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHH---HHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH---
Confidence 34567899999999999999999977432 222223 33334442 111 11 2333 566667777554
Q ss_pred HHhcCC-CCCeEEEEEe
Q 023575 135 VESASW-DGRYGLVVCT 150 (280)
Q Consensus 135 l~~g~~-~~~~vLvv~~ 150 (280)
++.|.. +++++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 455421 4578888764
No 167
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=87.73 E-value=0.58 Score=43.60 Aligned_cols=36 Identities=17% Similarity=0.137 Sum_probs=31.3
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhh
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~ 269 (280)
+|+++|++++|||.|=+|-+..-..-..++.|||..
T Consensus 278 al~~Agi~~~DID~~Ei~d~Fa~~~l~~~e~lgl~~ 313 (393)
T cd00826 278 ALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCP 313 (393)
T ss_pred HHHHcCCCHHHcCeeehhhhhHHHHHHHHHHhCCCc
Confidence 388999999999999999998888778888998743
No 168
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=87.69 E-value=0.79 Score=42.69 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=34.6
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLPS 278 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssas 278 (280)
+|+++|++++|||++=+|-+.....-...+.||+....=|+++-.
T Consensus 300 al~~agl~~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~ 344 (393)
T PRK08235 300 LLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGA 344 (393)
T ss_pred HHHHhCCCHHHCCeehhcchhHHHHHHHHHHhCCCcccCCcCCch
Confidence 488999999999999999888777777788888753222766543
No 169
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=87.68 E-value=1.7 Score=40.13 Aligned_cols=81 Identities=16% Similarity=0.118 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-ee-eccc-cCchHHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-GV-DSTN-ACYGGTAALFNCVN 133 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-~~-dv~~-~C~g~~~aL~~A~~ 133 (280)
....++++++|+++|++++|||++++..... ..+...++.+|++ +.. .+ +.++ ++++...+|..+.
T Consensus 280 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~--------~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~- 350 (379)
T PLN02326 280 RCVPQVIESALQKAGLTAESIDWLLLHQANQ--------RIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAV- 350 (379)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH--------HHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHH-
Confidence 3345678899999999999999998664322 1222344445543 221 12 2444 7777777777664
Q ss_pred HHHhcCC-CCCeEEEEEe
Q 023575 134 WVESASW-DGRYGLVVCT 150 (280)
Q Consensus 134 ~l~~g~~-~~~~vLvv~~ 150 (280)
+.+.. +++++|+++.
T Consensus 351 --~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 351 --RSGKVKKGDVIATAGF 366 (379)
T ss_pred --HcCCCCCCCEEEEEEE
Confidence 33321 4577887753
No 170
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=87.66 E-value=1.6 Score=40.58 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=35.8
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhc-cCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLR-NASLPS 278 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~-Ntssas 278 (280)
+|+++|++++|||++=+|-+..-..-..++.||+..- . |++.-.
T Consensus 301 al~~Agl~~~dId~~e~~d~f~~~~l~~~e~lg~~~~-~vN~~GG~ 345 (394)
T PRK06445 301 ALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPE-TVNIKGGA 345 (394)
T ss_pred HHHHcCCCHHHcCEEEecccchHHHHHHHHHhCCCcc-ccCCCCCH
Confidence 3889999999999999999998888888999997532 3 766543
No 171
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=87.56 E-value=3.2 Score=38.76 Aligned_cols=59 Identities=12% Similarity=-0.000 Sum_probs=34.5
Q ss_pred cccHHHHHHhhCCCCCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEE
Q 023575 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (280)
.+..++.++.++.++.....+.+... . .+.... .-...|+++||+++|++|+|||++-+
T Consensus 265 vl~se~~A~~~~~~p~~~i~g~~~~~--~-~~~~~~-~~~~~a~~~al~~Agl~~~Did~~ei 323 (404)
T PRK06205 265 LVTTEDKAEELGLRPLARLVSWAVAG--V-EPSRMG-IGPVPATEKALARAGLTLDDIDLIEL 323 (404)
T ss_pred EEecHHHHHHCCCCceEEEEEEEEec--c-CCcccc-ccHHHHHHHHHHHcCCCHHHCCEeee
Confidence 34555555555544432223444332 1 111111 23468999999999999999999863
No 172
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=86.61 E-value=3.2 Score=38.55 Aligned_cols=109 Identities=12% Similarity=0.062 Sum_probs=60.8
Q ss_pred cccHHHHHHhhCCCCC-eeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHH
Q 023575 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~~-~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l 100 (280)
.++.++.++.++.++- ||. +++... . ++ ++.......|++++|+++|++|+|||.+=+. + .+......
T Consensus 252 vl~See~A~~l~~~pv~~I~-g~~~~~--~-~~-~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~----d-aFa~~~l~- 320 (388)
T PRK06366 252 VMASEKAINEYGLKPIARIT-GYESAS--L-DP-LDFVEAPIPATRKLLEKQNKSIDYYDLVEHN----E-AFSIASII- 320 (388)
T ss_pred EEecHHHHHHcCCCcCEEEE-EEEEEe--c-CH-HHhcccHHHHHHHHHHHcCCCHHHcceeecc----c-hhHHHHHH-
Confidence 4666676666665444 443 444332 1 11 1222334789999999999999999998543 2 12222222
Q ss_pred HHHHHhcCCCCeeeeec-------cc--cCchHHHHHHHHHHHHHhcCCCCCeEEE
Q 023575 101 MQIFEKYGNTDIEGVDS-------TN--ACYGGTAALFNCVNWVESASWDGRYGLV 147 (280)
Q Consensus 101 ~~~l~~~g~~~~~~~dv-------~~--~C~g~~~aL~~A~~~l~~g~~~~~~vLv 147 (280)
.++.+|+..- .++. ++ ||+|....+..+.++-+.| .++.|+
T Consensus 321 --~le~lgl~g~-~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~---~~~g~~ 370 (388)
T PRK06366 321 --VRDQLKIDNE-RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRH---MKTGLA 370 (388)
T ss_pred --HHHHhCCCCC-ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcC---CCeEEE
Confidence 3333443211 2332 22 6777777777777776544 256554
No 173
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=85.58 E-value=6.9 Score=36.27 Aligned_cols=25 Identities=16% Similarity=0.317 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
...|++++|+++|++|+|||.+-+.
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~ 312 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEIN 312 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehc
Confidence 3589999999999999999999433
No 174
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.52 E-value=1.9 Score=40.45 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHHH
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l~ 105 (280)
=+.+|.+.||+++|++|+|||+|- ++|.|+. ..+.-...+.++++
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~-nD~~E~~ai~~vfg 322 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPA-NDKAESLAIKRVFG 322 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCC-ccHHHHHHHHHHhc
Confidence 345899999999999999999999 5666655 33443443444544
No 175
>PRK07937 lipid-transfer protein; Provisional
Probab=85.03 E-value=9.1 Score=35.09 Aligned_cols=59 Identities=8% Similarity=-0.085 Sum_probs=30.6
Q ss_pred cccHHHHHHhhCCCCCeeeeccCce--eeecCCCCCCHHHHHHHHHHHHHHH-cCCCCCCccEEEEe
Q 023575 22 CVLQEALEVHDGVSKGKYTVGLGQD--CMAFCSEVEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVG 85 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~~~~~~~ig~r--~~~~~~~~e~~~~la~~Aa~~aL~~-agi~~~~Id~li~~ 85 (280)
.++.++.++.++.++-||. +++.. ...+...+... ..++++++++ +|++|+|||.+=+.
T Consensus 212 vl~s~~~A~~l~~~pv~I~-g~~~~~~~~~~~~~d~~~----~~~~~~a~~~aAgi~~~diD~~Ei~ 273 (352)
T PRK07937 212 VLAAGDRARELRERPAWIT-GIEHRIESPSLGARDLTR----SPSTALAAEAATGGDAGGVDVAELH 273 (352)
T ss_pred EEecHHHHHHcCCCcEEEE-EEEEeeCCcccccccccc----HHHHHHHHHHhcCCCHHHCCEEEEe
Confidence 4566666666654443443 33332 11111111222 2334445555 59999999999554
No 176
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=84.09 E-value=4.3 Score=37.91 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE 83 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li 83 (280)
...|++++|+++|++++|||++-
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~e 321 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIE 321 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccc
Confidence 36899999999999999999986
No 177
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=84.04 E-value=8.5 Score=35.93 Aligned_cols=24 Identities=8% Similarity=0.250 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE 83 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li 83 (280)
-...|+++||+++|++|+|||++-
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~e 321 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIE 321 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEE
Confidence 446899999999999999999995
No 178
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=83.82 E-value=2.7 Score=37.80 Aligned_cols=81 Identities=17% Similarity=0.138 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCC--ee-ee-eccc-cCchHHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD--IE-GV-DSTN-ACYGGTAALFNCVN 133 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~--~~-~~-dv~~-~C~g~~~aL~~A~~ 133 (280)
....++.+++|+++|++++|||.+++...... .-.. ..+.+|.+. .. .+ +.++ +|++...+|..+
T Consensus 230 ~~~~~~i~~~L~~~gl~~~did~~~~H~~~~~-----~~~~---i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~-- 299 (329)
T PRK07204 230 KYLMKFIDKLLMDAGYTLADIDLIVPHQASGP-----AMRL---IRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA-- 299 (329)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH-----HHHH---HHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH--
Confidence 34557889999999999999999987643322 1222 334444431 11 11 2333 555666666644
Q ss_pred HHHhcCC-CCCeEEEEEe
Q 023575 134 WVESASW-DGRYGLVVCT 150 (280)
Q Consensus 134 ~l~~g~~-~~~~vLvv~~ 150 (280)
++.|.. +++++|+++.
T Consensus 300 -~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 300 -IKQKKVQRGNKILLLGT 316 (329)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 444421 4577877653
No 179
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=83.66 E-value=2.6 Score=44.36 Aligned_cols=173 Identities=14% Similarity=0.122 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccE-----EEEecc--cCCCCC---Cc-------hHHHHHHHHHhcCCCCeeeeec--
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGR-----LEVGSE--TVIDKS---KS-------IKTFLMQIFEKYGNTDIEGVDS-- 117 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~-----li~~t~--t~~~~~---p~-------~a~~l~~~l~~~g~~~~~~~dv-- 117 (280)
...|-.++.-+|+-++||.|.++.. .+-+|. |.. .. |. +.+.-+...+++ ...||+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~-~~~~dp~t~~Gy~mtgc~raMfaNRi----SytFDfqG 161 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSG-ALSQDPDTVNGYSMTGCVRAMFANRI----SYTFDFQG 161 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccc-cccCCCccccceeecccHHHHhhcce----eEEEeccC
Confidence 4678899999999999999988752 332221 111 11 11 111000011111 234554
Q ss_pred -----cccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc-----c--c------cCCC---------CCcccCCceEE
Q 023575 118 -----TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-----V--Y------AEGP---------ARPTGGAAAVA 170 (280)
Q Consensus 118 -----~~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~-----s--~------~~~~---------~~~~fGDgAaA 170 (280)
..+|++.+.+|..|.+-++.|.+ .++||-++... + | .+.. ....-.||.+|
T Consensus 162 PS~s~DtacsSsl~al~~a~~~~r~gqc--d~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~a 239 (2376)
T KOG1202|consen 162 PSFSVDTACSSSLMALQNAFQDIRSGQC--DAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVA 239 (2376)
T ss_pred CchhhhhhhHHHHHHHHHHHHhhhccCC--chhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEE
Confidence 45999999999999999999987 88888777653 1 1 1111 12345799999
Q ss_pred EEECCCCCc-eeecccc--ccccccccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCccE
Q 023575 171 MLIGPDAPI-AFESKLR--GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDY 247 (280)
Q Consensus 171 ~ll~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~ 247 (280)
++|.+.... ++..+.+ .+.++. | ... |-.+|. |+ .....++ |...++|+.++++-|
T Consensus 240 vllqrk~~ArRvYAtilnartNTDG---f-KEq-GvTfP~--G~----~Q~qLi~----------e~Yse~Gl~P~sv~Y 298 (2376)
T KOG1202|consen 240 VLLQRKSLARRVYATILNARTNTDG---F-KEQ-GVTFPS--GD----MQEQLIR----------ETYSEAGLNPESVVY 298 (2376)
T ss_pred EEEehhHHHHHHHHHhhccccCCCc---h-hhc-CccCCC--cH----HHHHHHH----------HHHHhcCCCcccEEE
Confidence 999886432 2222111 122221 1 111 122332 22 1122222 225678999999999
Q ss_pred EecCCCChHH
Q 023575 248 FVFHSPYNKL 257 (280)
Q Consensus 248 ~v~Hq~n~~~ 257 (280)
+=-|-.+.+.
T Consensus 299 vEAHGtGTkV 308 (2376)
T KOG1202|consen 299 VEAHGTGTKV 308 (2376)
T ss_pred EEeccCCCCC
Confidence 9999766554
No 180
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=82.96 E-value=2.7 Score=37.57 Aligned_cols=81 Identities=19% Similarity=0.136 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-eee-ccc-cCchHHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-GVD-STN-ACYGGTAALFNCVN 133 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-~~d-v~~-~C~g~~~aL~~A~~ 133 (280)
+...++.+++|+++|++++|||.+++..... ..-.. ..+.+|++ +.. .++ +++ +|++-+.+|..+.
T Consensus 219 ~~~~~~~~~~l~~~g~~~~di~~~~~h~~~~-----~~~~~---~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~- 289 (318)
T TIGR00747 219 RKMGDVVEETLEANGLDPEDIDWFVPHQANL-----RIIEA---LAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL- 289 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHH---HHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH-
Confidence 4456778999999999999999999654322 22223 33444543 222 222 333 6666666665543
Q ss_pred HHHhcCC-CCCeEEEEEe
Q 023575 134 WVESASW-DGRYGLVVCT 150 (280)
Q Consensus 134 ~l~~g~~-~~~~vLvv~~ 150 (280)
+.|.. +++++|+++.
T Consensus 290 --~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 --RTGRIKPGDLLLLVAF 305 (318)
T ss_pred --HcCCCCCCCEEEEEEE
Confidence 33311 4578887764
No 181
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=82.45 E-value=4.7 Score=36.84 Aligned_cols=82 Identities=16% Similarity=0.059 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-----eeeccc-cCchHHHH
Q 023575 58 ISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-----GVDSTN-ACYGGTAA 127 (280)
Q Consensus 58 ~~la~~Aa~~aL~~a--gi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-----~~dv~~-~C~g~~~a 127 (280)
.+...++++++|+++ |++++|||.+++...... .+....+.+|++ +.. .-+.++ ++++...+
T Consensus 258 ~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~--------i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~ 329 (361)
T cd00831 258 EKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRA--------VLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYV 329 (361)
T ss_pred HHHHHHHHHHHhccccCCCccccceEEEECCCChH--------HHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHH
Confidence 345666889999999 999999999987753322 222344444543 221 113444 77777788
Q ss_pred HHHHHHHHHhcCC-CCCeEEEEEe
Q 023575 128 LFNCVNWVESASW-DGRYGLVVCT 150 (280)
Q Consensus 128 L~~A~~~l~~g~~-~~~~vLvv~~ 150 (280)
|..+.. .+.. +++++|+++.
T Consensus 330 L~~~~~---~g~~~~Gd~vll~~~ 350 (361)
T cd00831 330 LAYMEA---KGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHH---hCCCCCCCEEEEEEE
Confidence 877643 3321 4577877764
No 182
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=82.24 E-value=3.8 Score=36.78 Aligned_cols=82 Identities=15% Similarity=0.129 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeee----eccc-cCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV----DSTN-ACYGGTAALFNCV 132 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~----dv~~-~C~g~~~aL~~A~ 132 (280)
.+...++.+++|+++|++++|||.+++.... +..-. ...+.+|++.-..+ +.++ ++++...+|..+
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~~-----~~~~~---~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~- 296 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQAN-----ARIVD---KVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA- 296 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC-----HHHHH---HHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH-
Confidence 4555678899999999999999999875322 12222 23444454311111 2333 555666666544
Q ss_pred HHHHhcCC-CCCeEEEEEe
Q 023575 133 NWVESASW-DGRYGLVVCT 150 (280)
Q Consensus 133 ~~l~~g~~-~~~~vLvv~~ 150 (280)
++.+.. +++++|+++.
T Consensus 297 --~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 --NLEQPLREGERLLFAAA 313 (326)
T ss_pred --HHhCCCCCCCEEEEEEE
Confidence 333321 4578888764
No 183
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=81.86 E-value=16 Score=33.94 Aligned_cols=59 Identities=12% Similarity=0.074 Sum_probs=36.2
Q ss_pred cccHHHHHHhhCCCC-CeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~-~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
.+..++.++.++.++ .|+. +.+... ..+ .....-...|++++|+++|++|+|||++=+.
T Consensus 252 vl~see~A~~l~~~p~~~i~-g~~~~~---~~~-~~~~~~~~~a~~~al~~agl~~~did~~ei~ 311 (387)
T PRK07850 252 LWMDEDRARALGLRPRARIV-AQALVG---AEP-YYHLDGPVQATAKVLEKAGMKIGDIDLVEIN 311 (387)
T ss_pred EEecHHHHHHcCCCCcEEEE-EEEEec---cCc-hhhcchHHHHHHHHHHHcCCCHHHcCeeeec
Confidence 455566666666443 3433 333211 111 1223445789999999999999999999763
No 184
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=80.86 E-value=2.8 Score=39.03 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=34.0
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLP 277 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssa 277 (280)
+|+++|++++|||++=+|-+..-..-..++.+|+....-|++.-
T Consensus 300 al~~Agi~~~Did~~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG 343 (394)
T PLN02644 300 ALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGG 343 (394)
T ss_pred HHHHcCCCHHHCCEEEeCcHHHHHHHHHHHHhCCCccccCCCCC
Confidence 48899999999999999988877777778888874322266653
No 185
>PRK06158 thiolase; Provisional
Probab=80.85 E-value=2 Score=39.84 Aligned_cols=29 Identities=10% Similarity=0.117 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
.-...|+++|++++|++|+|||.+=+..+
T Consensus 254 ~~~~~aa~~A~~~AGi~p~DId~~ElyD~ 282 (384)
T PRK06158 254 TAAAESGPRAFAMAGLTPADIDVVELYDA 282 (384)
T ss_pred hHHHHHHHHHHHHcCCCHHHCcEEEecCC
Confidence 34568999999999999999999876544
No 186
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=80.41 E-value=5.4 Score=37.01 Aligned_cols=78 Identities=10% Similarity=0.125 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEE-ecccCCCCCCchHHHHHHHHHhcCCCCeeeee----ccc-cCchHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD----STN-ACYGGTAALFNCV 132 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~-~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~d----v~~-~C~g~~~aL~~A~ 132 (280)
.-..++.+++|+++|++|+|||+|.. +|.|+. ..+.-...+.++++..+ ...+... +++ ..++++..|..+.
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~-~D~~E~~ai~~~~~~~~-~~~~v~s~K~~~Gh~~~Asg~~~l~~~~ 351 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPA-NDVAESRAIAEVAGALG-APLPVTAQKALFGHSKGAAGALQLIGAL 351 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCcc-ccHHHHHHHHHHHhccC-CCceeecccchhccchhhhhHHHHHHHH
Confidence 55678999999999999999999984 444444 23433444445554322 1222222 222 3444444454555
Q ss_pred HHHHhc
Q 023575 133 NWVESA 138 (280)
Q Consensus 133 ~~l~~g 138 (280)
..++.+
T Consensus 352 ~~l~~~ 357 (407)
T cd00828 352 QSLEHG 357 (407)
T ss_pred HHHhcC
Confidence 555555
No 187
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=80.24 E-value=2.1 Score=40.49 Aligned_cols=64 Identities=14% Similarity=0.060 Sum_probs=39.1
Q ss_pred cccHHHHHHhhCCCC-----CeeeeccCceeee-cCCC-CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 22 CVLQEALEVHDGVSK-----GKYTVGLGQDCMA-FCSE-VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~-----~~~~~~ig~r~~~-~~~~-~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
.+..++.++.++.++ -|+ .+++..... +.++ +-.....+..|++++++++|++++|||.+=+.-
T Consensus 266 vl~See~A~~l~~~p~~~~~v~i-~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~d 336 (438)
T PTZ00455 266 VLASEEGLQKMGLSPNDSRLVEI-KSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHD 336 (438)
T ss_pred EEecHHHHHhcCCCCCCCccEEE-EEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecc
Confidence 566777777777655 233 333322110 1011 112233457899999999999999999996543
No 188
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=79.91 E-value=1.5 Score=39.88 Aligned_cols=42 Identities=14% Similarity=0.172 Sum_probs=31.2
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEE-EecccCC
Q 023575 48 MAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVI 90 (280)
Q Consensus 48 ~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~ 90 (280)
.|+..|+.+- .=++.|.++||++||+.|+|||+|= ++|+||-
T Consensus 291 ~HiT~P~~dG-~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~ 333 (440)
T KOG1394|consen 291 YHITSPDPDG-AGAVLAMERALKDAGLSPEDIDYVNAHATSTPL 333 (440)
T ss_pred cccCCCCCCc-chHHHHHHHHHHHcCCChhhcCeeecccccCcC
Confidence 3455554432 2466788999999999999999998 6777755
No 189
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=79.53 E-value=2.4 Score=39.56 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
....|+++|++++|++++|||.+-+.
T Consensus 277 ~~~~aa~~a~~~Agi~~~Didv~el~ 302 (403)
T PRK06289 277 HVRQAVLDAYRRAGVGLDDLDGFEVH 302 (403)
T ss_pred HHHHHHHHHHHHcCCCHHHCeEEeee
Confidence 35689999999999999999998654
No 190
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=79.45 E-value=3 Score=38.83 Aligned_cols=64 Identities=11% Similarity=-0.033 Sum_probs=37.5
Q ss_pred cccHHHHHHhhCCCCCeeeeccCceee--ecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 22 CVLQEALEVHDGVSKGKYTVGLGQDCM--AFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~~~~~~~ig~r~~--~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
.++.++.++.++.++-|+. +++...- ....++. .......|+++|++++|++|+|||.+=+..+
T Consensus 218 vl~s~~~A~~l~~~~v~I~-g~~~~~~~~~~~~~~~-~~~~~~~aa~~a~~~AGi~~~did~~elyD~ 283 (388)
T PRK08142 218 VVVRPEIARSLKRPLVKVL-GAGEAIKGQMGGKVDL-TYSGAAWSGPAAFAEAGVTPADIKYASIYDS 283 (388)
T ss_pred EEecHHHHhhcCCCCEEEE-EEEEecCCccccCccc-ccHHHHHHHHHHHHHcCCCHHHCCEEEEecc
Confidence 4566666665543333333 3332211 1111222 2344568999999999999999998766544
No 191
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=78.82 E-value=3.9 Score=37.84 Aligned_cols=80 Identities=8% Similarity=0.107 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEe-cccCCCCCCchHHHHHHHHHhcCCCCeee----eeccc-cCchHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVG-SETVIDKSKSIKTFLMQIFEKYGNTDIEG----VDSTN-ACYGGTAALFNCV 132 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~-t~t~~~~~p~~a~~l~~~l~~~g~~~~~~----~dv~~-~C~g~~~aL~~A~ 132 (280)
.-..++++++|+++|++++|||+|... |.|+. ..+.-..-+.+.++... +.++. -.+++ .+++++..|-.+.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~-~d~~E~~al~~~~~~~~-~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 352 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPL-NDAAESKAIKRVFGEHA-KKVPVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCcc-ccHHHHHHHHHHhcccC-CCCceeCcchhhccchhhhhHHHHHHHH
Confidence 445678999999999999999999844 44433 22322222333332210 11211 12333 5677777777777
Q ss_pred HHHHhcCC
Q 023575 133 NWVESASW 140 (280)
Q Consensus 133 ~~l~~g~~ 140 (280)
..++.+..
T Consensus 353 ~~l~~~~i 360 (406)
T cd00834 353 LALRDGVL 360 (406)
T ss_pred HHHhcCCc
Confidence 77877744
No 192
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=78.79 E-value=8.2 Score=36.08 Aligned_cols=23 Identities=17% Similarity=0.255 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE 83 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li 83 (280)
...|++++|+++|++|+|||++-
T Consensus 298 ~~~A~~~al~~AGl~~~DID~ie 320 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIE 320 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCc
Confidence 36899999999999999999986
No 193
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=78.67 E-value=7 Score=36.54 Aligned_cols=23 Identities=17% Similarity=0.274 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE 83 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li 83 (280)
...|++++|+++|++|+|||++-
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~e 320 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIE 320 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcc
Confidence 35899999999999999999986
No 194
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=78.47 E-value=5.2 Score=35.63 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-eee-ccc-cCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-GVD-STN-ACYGGTAALFNCV 132 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-~~d-v~~-~C~g~~~aL~~A~ 132 (280)
.+...++.+++|+++|++++|||.+++....+. .-.. .++.+|.+ +.. .++ +++ ++++.+.+|..+.
T Consensus 222 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~~-----~~~~---~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 222 VRLMPESIEEALEKAGLTPDDIDWFVPHQANLR-----IIEA---VAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred HHhhHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHH---HHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 345568889999999999999999987643222 2222 33334442 111 111 333 5556666665553
Q ss_pred HHHHhcCC-CCCeEEEEEe
Q 023575 133 NWVESASW-DGRYGLVVCT 150 (280)
Q Consensus 133 ~~l~~g~~-~~~~vLvv~~ 150 (280)
+.+.. +++++|+++.
T Consensus 294 ---~~~~~~~G~~vll~~~ 309 (320)
T cd00830 294 ---EEGKLKKGDLVLLLGF 309 (320)
T ss_pred ---HcCCCCCCCEEEEEEE
Confidence 44421 4578888764
No 195
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=78.31 E-value=5.6 Score=35.51 Aligned_cols=81 Identities=20% Similarity=0.128 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-ee-eccc-cCchHHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-GV-DSTN-ACYGGTAALFNCVN 133 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-~~-dv~~-~C~g~~~aL~~A~~ 133 (280)
....++.+++|+++|++++|||.++.....+ ..-. .....+|++ +.. .+ +.++ +|+..+..|..+
T Consensus 219 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~-----~~~~---~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~-- 288 (319)
T PRK09352 219 RELAKVAREALEAAGLTPEDIDWLVPHQANL-----RIID---ATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEA-- 288 (319)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHH---HHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHH--
Confidence 3355688999999999999999999754222 1222 233344443 211 11 2333 556666666544
Q ss_pred HHHhcCC-CCCeEEEEEe
Q 023575 134 WVESASW-DGRYGLVVCT 150 (280)
Q Consensus 134 ~l~~g~~-~~~~vLvv~~ 150 (280)
++.|.. +++++|+++.
T Consensus 289 -~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 -VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 344421 4578887764
No 196
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=78.03 E-value=2.3 Score=39.62 Aligned_cols=24 Identities=21% Similarity=0.207 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE 83 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li 83 (280)
-...|+++||+++|++|+|||++=
T Consensus 291 ~~~~a~~~al~~agl~~~Did~~e 314 (392)
T PRK07108 291 GPVFAVPKLLKQAGLKVDDIDLWE 314 (392)
T ss_pred hHHHHHHHHHHHcCCCHHHcCchH
Confidence 447899999999999999999984
No 197
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=77.94 E-value=1.8 Score=33.43 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=30.5
Q ss_pred hhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCC
Q 023575 235 LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLP 277 (280)
Q Consensus 235 L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssa 277 (280)
|+++|++++|||.|=.|.+..-..-...+.+++....-|++.-
T Consensus 32 l~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG 74 (123)
T PF02803_consen 32 LERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGG 74 (123)
T ss_dssp HHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--
T ss_pred HHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccc
Confidence 7889999999999999999998888889999875522266543
No 198
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=77.32 E-value=4.6 Score=37.50 Aligned_cols=65 Identities=12% Similarity=0.015 Sum_probs=38.7
Q ss_pred cccHHHHHHhhCCCCC-eeeeccCcee--eecCCCCCCHHHHHHHHHHHHHHHcCCC--CCCccEEEEecc
Q 023575 22 CVLQEALEVHDGVSKG-KYTVGLGQDC--MAFCSEVEDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSE 87 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~~-~~~~~ig~r~--~~~~~~~e~~~~la~~Aa~~aL~~agi~--~~~Id~li~~t~ 87 (280)
.++.++.++.++.++. |+. +++... ..+...+.........|+++|++++|++ ++|||++=+..+
T Consensus 216 vl~s~e~a~~l~~~~~~~I~-g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~ 285 (386)
T PRK08313 216 VIGDEEAADAAAGRPVAWIH-GTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVP 285 (386)
T ss_pred EEecHHHHHhcCCCCCeEEE-EEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccC
Confidence 4666676666554443 553 444321 1111111222345668999999999997 699998865543
No 199
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=77.22 E-value=3 Score=38.81 Aligned_cols=24 Identities=13% Similarity=0.105 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCC--CCCccEEEEe
Q 023575 62 LTVVTSLLEKYKID--PTQIGRLEVG 85 (280)
Q Consensus 62 ~~Aa~~aL~~agi~--~~~Id~li~~ 85 (280)
..|+++|++++|++ ++|||.+-+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~ 284 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVD 284 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEe
Confidence 37999999999997 6999998654
No 200
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=77.05 E-value=4.1 Score=37.97 Aligned_cols=65 Identities=11% Similarity=-0.056 Sum_probs=37.6
Q ss_pred cccHHHHHHhhCCCCCeeeeccCce--eeecCCCCCCHHHHHHHHHHHHHHHcCCCC--CCccEEEEecc
Q 023575 22 CVLQEALEVHDGVSKGKYTVGLGQD--CMAFCSEVEDVISMSLTVVTSLLEKYKIDP--TQIGRLEVGSE 87 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~~~~~~~ig~r--~~~~~~~~e~~~~la~~Aa~~aL~~agi~~--~~Id~li~~t~ 87 (280)
.++.+|.++.++.++-||. +++.. ..++...+.....-...|++++++++|+++ +|||.+=+.-+
T Consensus 224 vl~s~e~A~~l~~~~v~I~-g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~ 292 (392)
T PRK06065 224 VLASEDLARRYTDTPVWVE-GVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDP 292 (392)
T ss_pred EEeCHHHHHhcCCCCEEEE-EEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCC
Confidence 4666777666665554543 33322 111111111122223579999999999985 99999975543
No 201
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=76.53 E-value=12 Score=35.04 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHHH
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l~ 105 (280)
-..++.++||+++|++|+|||++- ++|.|+. ..+.-...+.++++
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~-~D~~E~~Al~~~fg 332 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSV-GDVAEGKAINNALG 332 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCC-CCHHHHHHHHHHhC
Confidence 367899999999999999999997 4454543 23444444445543
No 202
>PRK07855 lipid-transfer protein; Provisional
Probab=76.04 E-value=3.2 Score=38.59 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
...|+++|++++|++++|||.+=+.-
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~D 293 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILYD 293 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecc
Confidence 44799999999999999999986543
No 203
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=75.85 E-value=7.5 Score=36.28 Aligned_cols=30 Identities=7% Similarity=-0.210 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-EecccCC
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVI 90 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~ 90 (280)
-..++.++||+++|+ ++|||+|. .+|.|+.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~ 311 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHP 311 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCC
Confidence 346899999999999 89999988 4455543
No 204
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=75.62 E-value=2 Score=33.21 Aligned_cols=76 Identities=20% Similarity=0.265 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeec-------cc--cCchHHHHHHH
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS-------TN--ACYGGTAALFN 130 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv-------~~--~C~g~~~aL~~ 130 (280)
=.+.|++++|+++|++++|||.+=+. + .+...... .++.+|.+. ..++. ++ ||+|...-++.
T Consensus 23 ~p~~A~~~al~~ag~~~~did~~Ei~----E-aFA~~~l~---~~~~lg~~~-~~vN~~GG~la~GHP~gasG~r~~~~l 93 (123)
T PF02803_consen 23 GPVPAARKALERAGLTPDDIDVIEIN----E-AFAAQVLA---FLEALGLDP-EKVNPNGGALALGHPLGASGARLVVEL 93 (123)
T ss_dssp THHHHHHHHHHHHT--GGGESEEEE-------SBHHHHHH---HHHHHTTGG-GGBSTT--HHHH-BHTTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCccccchhhcc----c-hhhhHHHH---hhccccccc-cccCcccccccccccccccccchhhhh
Confidence 34589999999999999999998544 2 22223333 333334321 12332 22 77777777777
Q ss_pred HHHHHHhcCCCCCeEEE
Q 023575 131 CVNWVESASWDGRYGLV 147 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLv 147 (280)
+..+-+.+ +++.|.
T Consensus 94 ~~~L~~~~---~~~gla 107 (123)
T PF02803_consen 94 AHQLRRRG---GRYGLA 107 (123)
T ss_dssp HHHHHHHT---TSEEEE
T ss_pred HHHHHHhc---hhhhhH
Confidence 77776654 255554
No 205
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=75.29 E-value=13 Score=32.07 Aligned_cols=86 Identities=15% Similarity=0.080 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCc-hHHHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHHh
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVES 137 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~-~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~~ 137 (280)
+-...-.+.+|++++++++|||.+.+.-. |-...|- ..+.+++.+.++=. .+-+.+ +.|-|-+. .. +++..
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKG-PGmgaPL~~vaivaRtlsllw~--kPlv~V-NHCigHIE---MG-R~iTg 122 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKG-PGMGAPLSVVAIVARTLSLLWN--KPLVGV-NHCIGHIE---MG-REITG 122 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCC-CCCCCchhhHHHHHHHHHHHhC--CCcccc-hhhhhhhh---hc-ceecc
Confidence 44455678999999999999999876643 3333443 34556677776532 222222 46665432 11 12221
Q ss_pred cCCCCCeEEEEEecccc
Q 023575 138 ASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 138 g~~~~~~vLvv~~e~~s 154 (280)
. ..-.||-|++-...
T Consensus 123 A--~nPvvLYvSGGNTQ 137 (336)
T KOG2708|consen 123 A--QNPVVLYVSGGNTQ 137 (336)
T ss_pred C--CCCEEEEEeCCceE
Confidence 1 22567777776654
No 206
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=75.28 E-value=11 Score=35.42 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHHHh
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l~~ 106 (280)
...+|.+++|+++|++|+|||+|- .+|.|+. ..+.-..-|.++++.
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~-~D~~E~~al~~~fg~ 325 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPA-GDVAEIKGIKRALGE 325 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCC-CCHHHHHHHHHHhcc
Confidence 456889999999999999999986 4555544 334444445555543
No 207
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=75.08 E-value=8.7 Score=35.07 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l~ 105 (280)
..-..+|.++||+++|++|+|||+|- ++|.|+. ..+.-..-+.++++
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~-~D~~E~~Ai~~~fg 252 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPV-GDLGEINAIKHLFG 252 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcC-CCHHHHHHHHHHhC
Confidence 44567899999999999999999987 4444544 33444444445543
No 208
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=74.86 E-value=6.5 Score=36.52 Aligned_cols=74 Identities=14% Similarity=0.220 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHHHhcCCCCeeee----eccc-cCchHHHHHHHHHHH
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV----DSTN-ACYGGTAALFNCVNW 134 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~----dv~~-~C~g~~~aL~~A~~~ 134 (280)
..++.+++|+++|++|+|||++. ++|.|+. ..+.-..-+.+++ |. +.+.- -+++ .+++++..+..+...
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~-~D~~E~~al~~~f---~~-~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~ 336 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPL-NDAMESRAVAAVF---GD-GVPCSSTKGLTGHTLGAAGAVEAAICWLA 336 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcC-CCHHHHHHHHHHh---CC-CCceeCCCcccccChhhcchHHHHHHHHH
Confidence 35899999999999999999987 3444543 2233233333333 21 12211 1332 444555555555555
Q ss_pred HHhcC
Q 023575 135 VESAS 139 (280)
Q Consensus 135 l~~g~ 139 (280)
++.+.
T Consensus 337 l~~~~ 341 (392)
T PRK09185 337 LRHGL 341 (392)
T ss_pred HhcCC
Confidence 56654
No 209
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=74.81 E-value=9.6 Score=34.90 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Ceee--ee-ccc-cCchHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIEG--VD-STN-ACYGGTAALFNC 131 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~~--~d-v~~-~C~g~~~aL~~A 131 (280)
........+++|+++|++++|||.+++.... ...+....+.+|++ +... ++ .++ +.++...+|..+
T Consensus 241 ~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~--------~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 241 LECEPKSFKEILEFSKVDEKDIAFHLFHQSN--------AYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC--------HHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 3444568899999999999999999976422 22333444555553 2321 23 333 666666677644
Q ss_pred HHHHHhcC
Q 023575 132 VNWVESAS 139 (280)
Q Consensus 132 ~~~l~~g~ 139 (280)
++.+.
T Consensus 313 ---~~~~~ 317 (353)
T PRK12880 313 ---DTPKE 317 (353)
T ss_pred ---HHcCC
Confidence 45553
No 210
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=74.66 E-value=4.1 Score=38.42 Aligned_cols=29 Identities=7% Similarity=0.037 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
.-...|++++|+++|++++|||.+=+.-+
T Consensus 309 ~~~~~a~~~al~~AGl~~~DiD~~Ei~d~ 337 (428)
T PRK08963 309 LGPAYATPLALERAGLTLADLTLIDMHEA 337 (428)
T ss_pred hHHHHHHHHHHHHcCCCHHHCCEEEEccc
Confidence 34567999999999999999999965543
No 211
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=74.45 E-value=7.2 Score=36.35 Aligned_cols=78 Identities=6% Similarity=0.013 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEE-ecccCCCCCCchHHHHHHHHHhcCCCCeeee----eccc-cCchHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGV----DSTN-ACYGGTAALFNC 131 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~----dv~~-~C~g~~~aL~~A 131 (280)
..-..+|.+++|+++|++|++||+|.. +|.|+. ..+.-..-+.+.++. .+.+.. -++. .+++++..+..+
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~-~D~~E~~al~~~fg~---~~~pv~s~K~~~Gh~~~aaG~~~l~~~ 344 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVFADAAGVPE-LDRAEAAALAAVFGP---RGVPVTAPKTMTGRLYAGGAPLDVATA 344 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCC-CCHHHHHHHHHHhCC---CCCceeCCCchhcchHHHHHHHHHHHH
Confidence 344568899999999999999999874 444443 234333334444432 122211 1222 344445555555
Q ss_pred HHHHHhcC
Q 023575 132 VNWVESAS 139 (280)
Q Consensus 132 ~~~l~~g~ 139 (280)
...++.+.
T Consensus 345 ~l~l~~~~ 352 (399)
T cd00832 345 LLALRDGV 352 (399)
T ss_pred HHHHhCCC
Confidence 55566553
No 212
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=74.27 E-value=3.5 Score=38.56 Aligned_cols=22 Identities=9% Similarity=0.134 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEE
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRL 82 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~l 82 (280)
...|+++||+++|++|+|||++
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ 326 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLV 326 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCee
Confidence 4589999999999999999998
No 213
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=74.18 E-value=3.6 Score=38.82 Aligned_cols=64 Identities=11% Similarity=0.049 Sum_probs=37.7
Q ss_pred cccHHHHHHhhCCCCC-eeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 22 ~v~~~~~~~~~g~~~~-~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
.++.++.++.++.++- ++..+......++.. ..+.......|++++++++|++++|||.+=+.-
T Consensus 272 vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d 336 (427)
T PRK09268 272 LLASEEWAAEHGLPVLAYLVDAETAAVDFVHG-KEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHE 336 (427)
T ss_pred EEecHHHHHHcCCCceEEEEEEEEEcCCcccc-cchhhccHHHHHHHHHHHcCCCHHHCCEEEecc
Confidence 5666777766665554 222221111111111 112233556799999999999999999997654
No 214
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=73.93 E-value=9.7 Score=35.81 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEE-ecccCC
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVI 90 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~-~t~t~~ 90 (280)
..++.+++|+++|++|+|||++.. +|.|+.
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~ 321 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPE 321 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcc
Confidence 558899999999999999999984 444443
No 215
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=73.52 E-value=7.5 Score=35.97 Aligned_cols=43 Identities=16% Similarity=0.349 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHH
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIF 104 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l 104 (280)
..+|+++||+++|++|+|||++. ..|.|+. ..+.-...+.+.+
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~-~D~~E~~a~~~~~ 320 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPL-GDKAETKAIKRVF 320 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCC-CCHHHHHHHHHHh
Confidence 56899999999999999999997 4444433 2233333344444
No 216
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=73.01 E-value=4.2 Score=37.86 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE 83 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li 83 (280)
....|+++||+++|++|+|||++=
T Consensus 291 ~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 291 APVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred HHHHHHHHHHHHcCCCHHHcCeee
Confidence 346899999999999999999986
No 217
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=72.84 E-value=6.6 Score=38.23 Aligned_cols=30 Identities=7% Similarity=0.161 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EecccCC
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVI 90 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li-~~t~t~~ 90 (280)
..++.++||+++|++|+|||+|- .+|.|+.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~ 437 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKA 437 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCC
Confidence 45889999999999999999987 4555544
No 218
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=72.36 E-value=6.2 Score=36.18 Aligned_cols=29 Identities=14% Similarity=0.058 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
.-...|++++|+++|++++|||++=+..+
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d~ 279 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYDC 279 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCc
Confidence 44568999999999999999999976543
No 219
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=71.09 E-value=8.4 Score=35.64 Aligned_cols=29 Identities=0% Similarity=-0.041 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
.+...++.++.|+++|++++|||.+++..
T Consensus 204 ~~~~~~~~~~~l~~~g~~~~did~~i~H~ 232 (379)
T TIGR01835 204 LNAFENAWNDYAKRTGLSLADFAAFCFHV 232 (379)
T ss_pred HHHHHHHHHHHHHHhCCCHHHcCEEEECC
Confidence 34566888999999999999999999875
No 220
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=70.86 E-value=5.2 Score=37.05 Aligned_cols=27 Identities=19% Similarity=0.249 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
-...|++++|+++|++++|||++-..-
T Consensus 259 ~~~~a~~~al~~aGi~~~did~~e~~d 285 (389)
T PRK06064 259 AAVVAAEKAYKMAGIEPKDIDVAEVHD 285 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 345799999999999999999986543
No 221
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.48 E-value=12 Score=34.88 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHHHhcCCCCeeee----eccc-cCchHHHHHHHHHHH
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV----DSTN-ACYGGTAALFNCVNW 134 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~----dv~~-~C~g~~~aL~~A~~~ 134 (280)
..+|+++||+++|++++|||++- .+|.|+. ..+.-..-+.+.++... .+++.- -+++ -+++++..+..+.-.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~-~d~~E~~al~~~~~~~~-~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~ 355 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPA-GDKAETQAIKRVFGEHA-YKVAVSSTKSMTGHLLGAAGAVEAIFSVLA 355 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCcc-ccHHHHHHHHHHhcccC-CCCeeECccchhchhHHHHHHHHHHHHHHH
Confidence 45899999999999999999997 4444433 22332333344443210 122211 1233 344444555555556
Q ss_pred HHhcC
Q 023575 135 VESAS 139 (280)
Q Consensus 135 l~~g~ 139 (280)
++.+.
T Consensus 356 l~~~~ 360 (411)
T PRK07314 356 IRDQV 360 (411)
T ss_pred HhCCC
Confidence 66553
No 222
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=70.40 E-value=12 Score=34.65 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEE-ecccC
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETV 89 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~t~ 89 (280)
..-..+|.++||+++|++++|||++.. +|.|+
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~ 310 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTP 310 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCC
Confidence 445568999999999999999999984 44443
No 223
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=70.28 E-value=6.8 Score=36.53 Aligned_cols=25 Identities=12% Similarity=0.089 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHcCCC--CCCccEEEEe
Q 023575 61 SLTVVTSLLEKYKID--PTQIGRLEVG 85 (280)
Q Consensus 61 a~~Aa~~aL~~agi~--~~~Id~li~~ 85 (280)
...|+++|++++|++ ++|||.+=+.
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~ 294 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVH 294 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEe
Confidence 567999999999997 7999998543
No 224
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=70.19 E-value=5.2 Score=37.38 Aligned_cols=24 Identities=8% Similarity=0.171 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLE 83 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li 83 (280)
-...|++++|+++|++|+|||++-
T Consensus 297 ~~~~a~~~a~~~agl~~~did~~e 320 (401)
T PRK08131 297 GPVEAIKKALARAGLTLDDMDIIE 320 (401)
T ss_pred hHHHHHHHHHHHcCCCHHHCCeeh
Confidence 346899999999999999999986
No 225
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.14 E-value=7.7 Score=35.97 Aligned_cols=32 Identities=16% Similarity=0.365 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-EecccCC
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVI 90 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~ 90 (280)
....+|.++||+++|++|+|||+|- ++|.|+.
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~ 286 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRL 286 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCC
Confidence 4567999999999999999999997 4454443
No 226
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=69.46 E-value=5.9 Score=30.03 Aligned_cols=27 Identities=26% Similarity=0.258 Sum_probs=18.1
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHH
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~ 260 (280)
+|+++|++++|||++..|-.+.+..+.
T Consensus 34 al~~agi~~~~I~~i~~hg~Gt~~~D~ 60 (119)
T PF02801_consen 34 ALADAGISPEDIDYIEAHGTGTPLGDA 60 (119)
T ss_dssp HHHHHTS-GGGEEEEE----SSHHHHH
T ss_pred HHhhhccccccceeeeeeccccccchh
Confidence 378899999999999999877776553
No 227
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=69.20 E-value=26 Score=32.42 Aligned_cols=96 Identities=9% Similarity=-0.037 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcC--C-CCeeee-eccc-cCchHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG--N-TDIEGV-DSTN-ACYGGTAALFNC 131 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g--~-~~~~~~-dv~~-~C~g~~~aL~~A 131 (280)
-......|++..+++.|+.|+|.|.+++.+-.+- .|--++ ..++... . +..... .+++ .|++...+|...
T Consensus 207 Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k--~~~ka~---k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~ 281 (377)
T COG3425 207 YFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK--FPKKAA---KSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASL 281 (377)
T ss_pred HHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCc--hHHHHH---HHhCccHhhcCccchhhhhcCcccchhHHHHHHHH
Confidence 4567789999999999999999999999864333 233222 2332211 0 122222 3665 788777776655
Q ss_pred HHHHHhcCCCCCeEEEEEeccccccCCCCCcccCCceEEEEEC
Q 023575 132 VNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIG 174 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s~~~~~~~~~fGDgAaA~ll~ 174 (280)
-...+ . +++++|++ -||-||++-..+
T Consensus 282 L~~a~--~-~G~rIl~~--------------SYGSGa~s~~fs 307 (377)
T COG3425 282 LDNAK--L-PGDRILLF--------------SYGSGAGSEAFS 307 (377)
T ss_pred HhhcC--C-CCCEEEEE--------------eeCCCcceeEEE
Confidence 44443 2 45888874 467777765554
No 228
>PRK06059 lipid-transfer protein; Provisional
Probab=68.70 E-value=5.5 Score=37.08 Aligned_cols=26 Identities=15% Similarity=0.189 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
...|++++++++|++++|||.+=+.-
T Consensus 275 ~~~a~~~a~~~agl~~~Did~~El~d 300 (399)
T PRK06059 275 KDQILDAAYAEAGIGPEDLSLAEVYD 300 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEeecc
Confidence 35789999999999999999996553
No 229
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=68.70 E-value=18 Score=33.98 Aligned_cols=30 Identities=10% Similarity=0.162 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHH-cCCCCCCccEEEE-eccc
Q 023575 59 SMSLTVVTSLLEK-YKIDPTQIGRLEV-GSET 88 (280)
Q Consensus 59 ~la~~Aa~~aL~~-agi~~~~Id~li~-~t~t 88 (280)
.-..+|.++||++ +|++|+|||+|-. +|.|
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt 314 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATST 314 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccC
Confidence 3456899999999 9999999999974 4444
No 230
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=68.40 E-value=3.3 Score=37.24 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=28.1
Q ss_pred hhcCCCCccCccEEecCCCChHHHHHHHHHhhh
Q 023575 235 LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFF 267 (280)
Q Consensus 235 L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~ 267 (280)
|+++||+.+|||+|=+..+..-..-...++|++
T Consensus 304 lk~aG~~~sdVd~~EiNEAFs~v~lA~iK~Lgl 336 (396)
T KOG1390|consen 304 LKKAGLEQSDVDYWEINEAFSVVVLANIKKLGL 336 (396)
T ss_pred HHHcCcchhhhhHHhhhhhhhHHHHHHHHHhCC
Confidence 788999999999998888877777777788876
No 231
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=67.50 E-value=5.5 Score=37.60 Aligned_cols=24 Identities=4% Similarity=0.083 Sum_probs=21.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEe
Q 023575 62 LTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
..|+++||+++|++++|||.+=+.
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 479999999999999999998654
No 232
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=67.22 E-value=6.8 Score=36.89 Aligned_cols=25 Identities=16% Similarity=0.302 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
...|++++|+++|++|+|||.+=+.
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 5689999999999999999998643
No 233
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=66.52 E-value=9.5 Score=34.56 Aligned_cols=29 Identities=17% Similarity=0.254 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
+..+..++.+++|++++++++|||.++..
T Consensus 221 av~~~~~~~~~~L~~~~l~~~dId~~vpH 249 (323)
T COG0332 221 AVRAMPKAIEEVLEKAGLTPEDIDWFVPH 249 (323)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEccc
Confidence 67888899999999999999999999854
No 234
>PLN03169 chalcone synthase family protein; Provisional
Probab=64.98 E-value=38 Score=31.53 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee----ee-eccc-cCchHHHHHHHHH
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE----GV-DSTN-ACYGGTAALFNCV 132 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~----~~-dv~~-~C~g~~~aL~~A~ 132 (280)
.....+++|+++|++++|||-+.++-. |.....+..+.+.+|++ +.. .+ +.++ ++++-..+|+.+.
T Consensus 283 ~~~~i~~~L~~~gl~~~did~~~~v~H------q~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~ 356 (391)
T PLN03169 283 IEGFCKKLMKKAGLVEKDYNDLFWAVH------PGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR 356 (391)
T ss_pred HHHHHHHHHHHcCCCCCCCCcceEEec------CCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHH
Confidence 344568999999999999994433211 22334444555666653 222 12 3454 8888888887764
Q ss_pred HH--HHhcCCCCCeEEEEEe
Q 023575 133 NW--VESASWDGRYGLVVCT 150 (280)
Q Consensus 133 ~~--l~~g~~~~~~vLvv~~ 150 (280)
.- ++... +++++|+++.
T Consensus 357 ~~~~~~~~~-~gd~~ll~af 375 (391)
T PLN03169 357 EELKKKGEE-DEEWGLILAF 375 (391)
T ss_pred HhhcccCCC-CCcEEEEEEE
Confidence 32 21000 2367776653
No 235
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=64.71 E-value=20 Score=33.34 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEE-ecccC
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETV 89 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~t~ 89 (280)
.....++.+++|+++|++++|||++.. +|.|+
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~ 310 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTP 310 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCC
Confidence 345568999999999999999999984 45454
No 236
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=64.69 E-value=20 Score=31.80 Aligned_cols=84 Identities=15% Similarity=0.097 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee-----eee-ccc-cCchHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE-----GVD-STN-ACYGGTAA 127 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~-----~~d-v~~-~C~g~~~a 127 (280)
......++++++|++.+++ +|||+++....... ..-. ...+.++++ ++. .++ +++ +|++....
T Consensus 221 ~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~~----~~~~---~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 221 AHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNGK----KILE---AVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred HhHHHHHHHHHHHHHcccc-cccceeeccCchHH----HHHH---HHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 4567788899999999999 99998876543321 1222 333344431 121 122 444 77777777
Q ss_pred HHHHHHHHHhcCC-CCCeEEEEEec
Q 023575 128 LFNCVNWVESASW-DGRYGLVVCTD 151 (280)
Q Consensus 128 L~~A~~~l~~g~~-~~~~vLvv~~e 151 (280)
|..+. +.+.. +++++|+++.-
T Consensus 293 L~~~~---~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 293 LASLL---ESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHHHH---hcCCCCCCCEEEEEEec
Confidence 77663 33321 35788887653
No 237
>PRK08304 stage V sporulation protein AD; Validated
Probab=63.90 E-value=58 Score=29.69 Aligned_cols=88 Identities=13% Similarity=0.078 Sum_probs=50.6
Q ss_pred HHHHHHHH---HHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCC--------CCeeeee-----cc---
Q 023575 58 ISMSLTVV---TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN--------TDIEGVD-----ST--- 118 (280)
Q Consensus 58 ~~la~~Aa---~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~--------~~~~~~d-----v~--- 118 (280)
.-||-+|+ .+=|++.|.+|+|-|+|+. +|.. .-....+.++|++-|. +...-|| +.
T Consensus 204 aaMapAa~dti~~h~~d~~~~~~~yDli~t----GDlg-~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGg 278 (337)
T PRK08304 204 AAMAPAAADTIQQHFKDTGRSPEDYDLIVT----GDLG-RVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGG 278 (337)
T ss_pred hhhhHHHHHHHHHHHHHcCCChhhccEEEE----cchH-HHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCC
Confidence 34554444 5557799999999999974 4421 1123344456655442 1334555 32
Q ss_pred --ccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc
Q 023575 119 --NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (280)
Q Consensus 119 --~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~ 153 (280)
.||++-+..=..- ..|+.|.+ +++|+|+.-..
T Consensus 279 SGc~csa~v~~~~~~-~~~~~g~~--~rvl~v~tGaL 312 (337)
T PRK08304 279 SGCACSAVVTYGYLL-KELQKGKL--KRVLVVATGAL 312 (337)
T ss_pred cccchhHHHHHHHHH-HHHhcCCc--eEEEEEEchhh
Confidence 2555544443333 34567866 99999986553
No 238
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=63.24 E-value=17 Score=34.36 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEE-ecccC
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETV 89 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~-~t~t~ 89 (280)
.-..+|.++||+++|++|+|||+|-. +|.|+
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~ 330 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTP 330 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCc
Confidence 34567899999999999999999973 44444
No 239
>PLN02377 3-ketoacyl-CoA synthase
Probab=61.26 E-value=16 Score=35.19 Aligned_cols=43 Identities=12% Similarity=0.172 Sum_probs=32.2
Q ss_pred HhhhcCCCCccCccEEecCC----CChHHHHHHHHHhhhh-hhhc-cCC
Q 023575 233 EKLEGRQFSMLDVDYFVFHS----PYNKLVQKSFARLFFN-DFLR-NAS 275 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~l~~~-~~~~-Nts 275 (280)
++|+++|++++|||.+|+.- +.+..--.+.+++|+. ++.. |.+
T Consensus 182 ~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~ 230 (502)
T PLN02377 182 NLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLG 230 (502)
T ss_pred HHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecc
Confidence 45899999999999999832 3345555788899986 6766 544
No 240
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.97 E-value=28 Score=32.49 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-EecccC
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETV 89 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li-~~t~t~ 89 (280)
.-..+|.++||+++|++|+|||+|- ++|.|+
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~ 319 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTP 319 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCc
Confidence 3456899999999999999999997 444444
No 241
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=58.77 E-value=11 Score=33.18 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEeccc
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSET 88 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t 88 (280)
.||...|++++.+++|+.|+||+.|=..-|.
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdcf 301 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDCF 301 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeeccc
Confidence 5899999999999999999999999766553
No 242
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.67 E-value=10 Score=35.38 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIF 104 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l 104 (280)
+-..++.+++|++++++|+|||+|. ++|.|+. ..+.-...+.+++
T Consensus 275 ~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~-~D~~E~~Ai~~~f 320 (405)
T PRK09116 275 ETMQIAMELALKDAGLAPEDIGYVNAHGTATDR-GDIAESQATAAVF 320 (405)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEECcCccCCC-CCHHHHHHHHHHh
Confidence 3445899999999999999999998 4555544 3344344444444
No 243
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=57.79 E-value=19 Score=32.07 Aligned_cols=43 Identities=23% Similarity=0.238 Sum_probs=32.5
Q ss_pred HhhhcCCCCccCccEEecCC----CChHHHHHHHHHhhhh-hhhc-cCC
Q 023575 233 EKLEGRQFSMLDVDYFVFHS----PYNKLVQKSFARLFFN-DFLR-NAS 275 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~l~~~-~~~~-Nts 275 (280)
++|+++|++++|||.+|..- +.+.+-..+.++++++ ++.. |.|
T Consensus 93 ~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLs 141 (290)
T PF08392_consen 93 DLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLS 141 (290)
T ss_pred HHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeeccc
Confidence 45999999999999998763 5566777788888885 4554 444
No 244
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=57.19 E-value=7.4 Score=36.38 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EecccC
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETV 89 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li-~~t~t~ 89 (280)
..++.++||+++|++|+|||+|- ++|.|+
T Consensus 283 ~~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 283 EMRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 35899999999999999999987 444444
No 245
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=55.77 E-value=28 Score=29.81 Aligned_cols=36 Identities=19% Similarity=0.127 Sum_probs=25.0
Q ss_pred HhhhcCCCCccCccEEecCC----CChHHHHHHHHHhhhh
Q 023575 233 EKLEGRQFSMLDVDYFVFHS----PYNKLVQKSFARLFFN 268 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~l~~~ 268 (280)
++|+++|++++||+++|+=. ..+.+--.+.++||+.
T Consensus 110 ~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~ 149 (226)
T PF00195_consen 110 KALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLR 149 (226)
T ss_dssp HHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--
T ss_pred HHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCC
Confidence 46999999999999999743 3344555788899874
No 246
>PRK09604 UGMP family protein; Validated
Probab=52.02 E-value=54 Score=29.73 Aligned_cols=30 Identities=10% Similarity=0.192 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
-.+......+++|+++|++++|||.|.++.
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~ 80 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTA 80 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 356777889999999999999999998775
No 247
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=49.98 E-value=15 Score=34.04 Aligned_cols=45 Identities=16% Similarity=0.094 Sum_probs=36.0
Q ss_pred hhhcCCCCccCccEEecCCCChHHHHHHHHHhhhhhhhccCCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASLPS 278 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~~~~~~Ntssas 278 (280)
+++++|++++|||++=+|-+..-..-..++.|||..-.-|++.-.
T Consensus 289 a~~~agi~~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~ 333 (382)
T PRK07801 289 ALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGA 333 (382)
T ss_pred HHHHcCCCHHHcCEeeecccchHHHHHHHHHhCCCchhcCCCcch
Confidence 488999999999999999999888888899999753211776543
No 248
>PRK14878 UGMP family protein; Provisional
Probab=49.74 E-value=92 Score=28.11 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 60 MSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
.-..+.+++|+++|++++|||.|.++.
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~ 73 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQ 73 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 344889999999999999999998765
No 249
>PLN03170 chalcone synthase; Provisional
Probab=48.84 E-value=60 Score=30.32 Aligned_cols=67 Identities=10% Similarity=-0.115 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCC--Cee----eee-ccc-cCchHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT--DIE----GVD-STN-ACYGGTAALF 129 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~--~~~----~~d-v~~-~C~g~~~aL~ 129 (280)
.+.....++++|+++|++++|||..++.- .....+....+.+|++ +.. .++ .+| +.++-+.+|+
T Consensus 280 ~~~i~~~v~~~L~~~gl~~~di~~~v~Hq--------gg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~ 351 (401)
T PLN03170 280 SKNIERSLEEAFKPLGITDYNSIFWVAHP--------GGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILD 351 (401)
T ss_pred HHHHHHHHHHHHHhcCCCccccCeEEecC--------CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHH
Confidence 34444577888889999999999976542 2334444455555653 111 122 333 5666667777
Q ss_pred HHH
Q 023575 130 NCV 132 (280)
Q Consensus 130 ~A~ 132 (280)
...
T Consensus 352 ~~~ 354 (401)
T PLN03170 352 EMR 354 (401)
T ss_pred HHH
Confidence 664
No 250
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=47.33 E-value=1.2e+02 Score=27.51 Aligned_cols=88 Identities=10% Similarity=0.003 Sum_probs=49.4
Q ss_pred HHHHHHHH---HHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCC--------CCeeeeecc--------
Q 023575 58 ISMSLTVV---TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN--------TDIEGVDST-------- 118 (280)
Q Consensus 58 ~~la~~Aa---~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~--------~~~~~~dv~-------- 118 (280)
.-||-+|+ .+=|++.|.+|++-|+|+. +|. -.-....+.++|++-|. +...-||-.
T Consensus 198 aamapaa~dti~~h~~d~~~~~~~yd~i~t----gdl-g~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggs 272 (327)
T TIGR02845 198 AAMAPAAADTIEAHFKDTGRSVDDYDLIVT----GDL-ARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGS 272 (327)
T ss_pred hhhhHHHHHHHHHHHHHcCCChhhccEEEe----cch-HHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCc
Confidence 34554444 5567799999999999974 442 11122334455555442 123344321
Q ss_pred -ccCchHHHHHHHHHHHHHhcCCCCCeEEEEEeccc
Q 023575 119 -NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (280)
Q Consensus 119 -~~C~g~~~aL~~A~~~l~~g~~~~~~vLvv~~e~~ 153 (280)
.||++-+..=..- ..++.|.+ +++|+|+.-..
T Consensus 273 gc~csa~v~~~~~~-~~~~~g~~--~r~l~v~tgal 305 (327)
T TIGR02845 273 GCACSAVVTYGHIL-KEMLRGKL--KKVLVVATGAL 305 (327)
T ss_pred ccchhHHHHHHHHH-HHHhcCcc--eEEEEEEchhh
Confidence 2555554443333 33566866 99999976543
No 251
>PLN02192 3-ketoacyl-CoA synthase
Probab=47.10 E-value=34 Score=33.07 Aligned_cols=43 Identities=14% Similarity=0.221 Sum_probs=32.3
Q ss_pred HhhhcCCCCccCccEEecC----CCChHHHHHHHHHhhhh-hhhc-cCC
Q 023575 233 EKLEGRQFSMLDVDYFVFH----SPYNKLVQKSFARLFFN-DFLR-NAS 275 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~H----q~n~~~~~~~~~~l~~~-~~~~-Nts 275 (280)
++|+++|++++|||.+|+. ++.+..--.+.+++|+. ++.. |.+
T Consensus 186 ~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLs 234 (511)
T PLN02192 186 QLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLG 234 (511)
T ss_pred HHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcc
Confidence 4599999999999999875 33455555788899986 6766 554
No 252
>PLN02932 3-ketoacyl-CoA synthase
Probab=46.01 E-value=39 Score=32.40 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=31.7
Q ss_pred HhhhcCCCCccCccEEecCC----CChHHHHHHHHHhhhh-hhhc-cCC
Q 023575 233 EKLEGRQFSMLDVDYFVFHS----PYNKLVQKSFARLFFN-DFLR-NAS 275 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~l~~~-~~~~-Nts 275 (280)
++|+++|++++|||++|... +.+..--.+.+++|+. ++.. |.+
T Consensus 158 ~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~ 206 (478)
T PLN02932 158 NLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLG 206 (478)
T ss_pred HHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEec
Confidence 45899999999999998743 3344555788899985 6766 443
No 253
>PLN02854 3-ketoacyl-CoA synthase
Probab=44.53 E-value=34 Score=33.20 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=31.4
Q ss_pred HhhhcCCCCccCccEEecCC----CChHHHHHHHHHhhhh-hhhc-cCC
Q 023575 233 EKLEGRQFSMLDVDYFVFHS----PYNKLVQKSFARLFFN-DFLR-NAS 275 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~l~~~-~~~~-Nts 275 (280)
++|+++|++++|||.+|+.. +.+..--.+.+++|+. ++.. |.+
T Consensus 198 ~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLs 246 (521)
T PLN02854 198 SLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLG 246 (521)
T ss_pred HHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecc
Confidence 45899999999999999842 2234444678899986 7766 554
No 254
>PLN03172 chalcone synthase family protein; Provisional
Probab=43.42 E-value=57 Score=30.40 Aligned_cols=37 Identities=8% Similarity=-0.029 Sum_probs=27.0
Q ss_pred HhhhcCCCCccCccEEecCC----CChHHHHHHHHHhhhhh
Q 023575 233 EKLEGRQFSMLDVDYFVFHS----PYNKLVQKSFARLFFND 269 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~l~~~~ 269 (280)
++|+++|++++|||++|+.. ..+.+--.+.++||+.+
T Consensus 112 ~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~ 152 (393)
T PLN03172 112 KAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKP 152 (393)
T ss_pred HHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCC
Confidence 45899999999999987532 23444446788899854
No 255
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=43.14 E-value=26 Score=32.18 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=30.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
..|+..+|......+++++|+++.+|+|.|+=.|
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 3578899999999999999999999999998554
No 256
>PRK12404 stage V sporulation protein AD; Provisional
Probab=42.91 E-value=59 Score=29.52 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=23.8
Q ss_pred HhhhcCCCCccCccEEecCCCC-hHHHH-HHHHHhhh
Q 023575 233 EKLEGRQFSMLDVDYFVFHSPY-NKLVQ-KSFARLFF 267 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq~n-~~~~~-~~~~~l~~ 267 (280)
++|+++|++++|||+++..... ..+.- .++++|++
T Consensus 64 ~AL~kAGI~~~DID~i~vGdL~nQ~ipssfvar~LGI 100 (334)
T PRK12404 64 RAIEKAKLRKEDIQFFLAGDLMNQITPTSFAARTLGI 100 (334)
T ss_pred HHHHHcCCCHHHCCEEEEEecCCCcCcHHHHHHHhCC
Confidence 3589999999999999995432 11111 45567763
No 257
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=42.53 E-value=37 Score=25.87 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=30.3
Q ss_pred HHHHHHHcCCCCCCccEEEEecccCC--CCCCchHHHHHHHHHhcCCCCeeeeecc
Q 023575 65 VTSLLEKYKIDPTQIGRLEVGSETVI--DKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (280)
Q Consensus 65 a~~aL~~agi~~~~Id~li~~t~t~~--~~~p~~a~~l~~~l~~~g~~~~~~~dv~ 118 (280)
..+.+++.+++++||--++|.. |+| -.+|+.++ +. +.|..+++-++..
T Consensus 26 l~~ii~~N~l~~edivSv~FT~-T~DL~a~FPA~aa---R~--~~Gw~~Vplmc~q 75 (117)
T TIGR01796 26 LTELMERNELTPEDLISVIFTV-TEDLHADFPAAAA---RG--LPGWTDVPVMCAQ 75 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEEe-cCcccccChHHHH---Hh--ccCCCCcceeccC
Confidence 3456678999999999998764 555 22454443 12 2366666666654
No 258
>PLN03171 chalcone synthase-like protein; Provisional
Probab=41.89 E-value=1.7e+02 Score=27.23 Aligned_cols=85 Identities=15% Similarity=0.005 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHH---------cCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCC--ee----ee-eccc-
Q 023575 57 VISMSLTVVTSLLEK---------YKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD--IE----GV-DSTN- 119 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~---------agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~--~~----~~-dv~~- 119 (280)
...+..++.+++|++ +|++++||+.++ . |.....+....+.+|++. .. .+ +.++
T Consensus 277 vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~--H-------q~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNt 347 (399)
T PLN03171 277 VPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV--H-------PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNM 347 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE--c-------CCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcc
Confidence 445665666777665 588899998763 2 122244445556666532 22 12 2444
Q ss_pred cCchHHHHHHHHHHHHHhcCCCC---CeEEEEEe
Q 023575 120 ACYGGTAALFNCVNWVESASWDG---RYGLVVCT 150 (280)
Q Consensus 120 ~C~g~~~aL~~A~~~l~~g~~~~---~~vLvv~~ 150 (280)
++++-..+|..+..-.+.+..++ +++|+++.
T Consensus 348 ssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~f 381 (399)
T PLN03171 348 FGATVIFALDELRRQMEEAAAAGAWPELGVMMAF 381 (399)
T ss_pred hhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEE
Confidence 66777778876654322110133 67777654
No 259
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=41.65 E-value=49 Score=27.58 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
...+......+++|++++++++|||.|+++..
T Consensus 32 ~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~G 63 (202)
T TIGR03725 32 NHSEILLPMIEELLAEAGLSLQDLDAIAVGVG 63 (202)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 35566678899999999999999999998754
No 260
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=41.37 E-value=74 Score=27.06 Aligned_cols=62 Identities=10% Similarity=0.074 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeecc
Q 023575 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (280)
Q Consensus 55 e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~ 118 (280)
..-.+......+.+|.++|+++.|||.|+++..-+.+.-=..+.-+++-|.. + .+++.+-++
T Consensus 35 r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~-~-l~iplvgvs 96 (220)
T COG1214 35 RNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLAL-A-LNIPLVGVS 96 (220)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHH-H-cCCCEEEeC
Confidence 3456777789999999999999999999988644333222233333333433 1 235555544
No 261
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=41.09 E-value=51 Score=29.46 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
.+......+++|+++|++++|||.|.++.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~ 77 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQ 77 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 45666778999999999999999998775
No 262
>PLN03173 chalcone synthase; Provisional
Probab=39.59 E-value=59 Score=30.26 Aligned_cols=37 Identities=8% Similarity=-0.015 Sum_probs=26.8
Q ss_pred HhhhcCCCCccCccEEecCCC----ChHHHHHHHHHhhhhh
Q 023575 233 EKLEGRQFSMLDVDYFVFHSP----YNKLVQKSFARLFFND 269 (280)
Q Consensus 233 ~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~l~~~~ 269 (280)
++|+++|++++|||++|+... .+..--.+.++||+.+
T Consensus 112 ~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~ 152 (391)
T PLN03173 112 KAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRS 152 (391)
T ss_pred HHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCc
Confidence 458999999999999876532 3333446778888854
No 263
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=39.34 E-value=48 Score=25.36 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=28.5
Q ss_pred HHHHHHHHcCCCCCCccEEEEecccCC--CCCCchHHHHHHHHHhcCCCCeeeeecc
Q 023575 64 VVTSLLEKYKIDPTQIGRLEVGSETVI--DKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (280)
Q Consensus 64 Aa~~aL~~agi~~~~Id~li~~t~t~~--~~~p~~a~~l~~~l~~~g~~~~~~~dv~ 118 (280)
-.++.+++.+++++||-.++|.. |+| -..|+.+.. .+ .|...++-++..
T Consensus 25 Ll~~i~~~N~l~~~dIvSi~FT~-T~DL~a~fPA~a~R---~~--~g~~~Vpl~c~~ 75 (118)
T PF07736_consen 25 LLEEILERNELSPEDIVSIIFTV-TPDLDAAFPAAAAR---EL--PGWDDVPLMCAQ 75 (118)
T ss_dssp HHHHHHHHTT--GGGEEEEEEEE--TT--SS-TCHHHH---HT--TTGTTSEEEEEE
T ss_pred HHHHHHHHcCCCHHHEEEEEEEe-CCCcCccChHHHHH---cc--CCCCccceeccC
Confidence 34556678999999999998764 665 334665542 22 255566666544
No 264
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=37.68 E-value=88 Score=28.58 Aligned_cols=85 Identities=9% Similarity=0.039 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchH--HHHHHHHHhcCCCCeeeeeccccCchHHHHHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIK--TFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a--~~l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~A~~~l~ 136 (280)
+-.....+++|+++|++.+|||+|-++. ++-..+++- ...++.|... -+.+-+-++ .|-|=+.+-. +.
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~--gPGL~gaL~VG~~~Ak~LA~a--~~kPli~Vn-H~~gHi~a~~-----l~ 121 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTA--GPGLGGALLVGATAAKALALA--LNKPLIPVN-HLEGHIEAAR-----LE 121 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEec--CCCchhHHHHHHHHHHHHHHH--hCCCEeecc-hHHHHHHHHH-----hc
Confidence 3445678899999999999999997653 333444422 2223344331 123333333 4555444333 32
Q ss_pred hc-CCCCCeEEEEEecccc
Q 023575 137 SA-SWDGRYGLVVCTDSAV 154 (280)
Q Consensus 137 ~g-~~~~~~vLvv~~e~~s 154 (280)
.+ .. .--+|+|++-...
T Consensus 122 ~~~~~-p~v~LlVSGGHTq 139 (342)
T COG0533 122 TGLAF-PPVALLVSGGHTQ 139 (342)
T ss_pred cCCCC-CcEEEEEecCceE
Confidence 33 22 2456888776554
No 265
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=37.47 E-value=65 Score=37.64 Aligned_cols=79 Identities=15% Similarity=0.165 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EecccCCCCCCchHHHHHHHHHhcCC--CCeee----eeccc-cCchHHHHHHHHH
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGN--TDIEG----VDSTN-ACYGGTAALFNCV 132 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li-~~t~t~~~~~p~~a~~l~~~l~~~g~--~~~~~----~dv~~-~C~g~~~aL~~A~ 132 (280)
-.++.++||+++|++|++||+|- ++|.|+. ..|.-..-+.++++.... ..+.. -.+++ -+++++.+|--+.
T Consensus 317 q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~-gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~ 395 (2582)
T TIGR02813 317 QAKALKRAYDDAGFAPHTCGLIEAHGTGTAA-GDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAV 395 (2582)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCCC-CCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHH
Confidence 36899999999999999999997 4555544 334444444555543210 11111 13443 5666666776666
Q ss_pred HHHHhcCC
Q 023575 133 NWVESASW 140 (280)
Q Consensus 133 ~~l~~g~~ 140 (280)
-.++.+..
T Consensus 396 lal~~~~i 403 (2582)
T TIGR02813 396 LALHHKVL 403 (2582)
T ss_pred HHHhcCCc
Confidence 66676643
No 266
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=35.90 E-value=50 Score=25.24 Aligned_cols=38 Identities=13% Similarity=0.167 Sum_probs=26.3
Q ss_pred eccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 41 ~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
-|+|.|+ ....+...++.+++|++.++++.+|+.|...
T Consensus 4 ~GiGcrr-------~~~~~~i~~ai~~~l~~~~~~~~~i~~iasi 41 (121)
T PF01890_consen 4 LGIGCRR-------GAPAEEIEEAIEQALAEAGLSPRSIAAIASI 41 (121)
T ss_dssp EEEEE-S-------S--HHHHHHHHHHHHHHCT--GGGEEEEEES
T ss_pred EEeCcCC-------CCCHHHHHHHHHHHHHHcCCChhhccEEEec
Confidence 4777663 1245667799999999999999999999544
No 267
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=35.26 E-value=36 Score=26.26 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=29.3
Q ss_pred eeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 40 ~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
.-|||.|+ + ...+...++.+++|++.++++.+|+.|-..
T Consensus 5 ~vGIGcr~------~-~~~e~i~~ai~~~L~~~~l~~~si~~lasi 43 (126)
T PRK07027 5 ALGIGCRR------G-VPAEQIEAAIRAALAQRPLASADVRVVATL 43 (126)
T ss_pred EEeeccCC------C-CCHHHHHHHHHHHHHHcCCCHHHhheeEeh
Confidence 35788663 1 233456799999999999999999999544
No 268
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=35.11 E-value=44 Score=29.29 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
++......+++|++++++++|||.|.++.
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~ 58 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTR 58 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 45566888999999999999999998775
No 269
>PLN03168 chalcone synthase; Provisional
Probab=34.68 E-value=51 Score=30.67 Aligned_cols=52 Identities=8% Similarity=-0.050 Sum_probs=33.7
Q ss_pred HHHHHHHHH-HHHHHHHHHHhhhcCCCCccCccEEecCCCC----hHHHHHHHHHhhhhh
Q 023575 215 TCYLMALDS-CYKYFCQKFEKLEGRQFSMLDVDYFVFHSPY----NKLVQKSFARLFFND 269 (280)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~l~~~~ 269 (280)
+.|.+...+ ..+... ++|+++|++++|||++|+.... +..--.+.++||+..
T Consensus 95 ~~~~~~a~~La~~Aa~---~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~ 151 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQ---KAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKP 151 (389)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCC
Confidence 455554333 333332 4699999999999999886432 333336778888854
No 270
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Probab=34.44 E-value=2e+02 Score=25.65 Aligned_cols=20 Identities=25% Similarity=0.459 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHcCCCCCCc
Q 023575 60 MSLTVVTSLLEKYKIDPTQI 79 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~I 79 (280)
....|..++|++.+++|+|.
T Consensus 11 ~i~~~~~~a~~~l~~~p~d~ 30 (287)
T TIGR02177 11 GILSALQRALAELNLDPEQV 30 (287)
T ss_pred HHHHHHHHHHHHhcCCCCCE
Confidence 45678899999999998874
No 271
>PLN00415 3-ketoacyl-CoA synthase
Probab=34.28 E-value=50 Score=31.54 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=28.2
Q ss_pred hhhcCCCCccCccEEecCCCC----hHHHHHHHHHhhhh-hhhc
Q 023575 234 KLEGRQFSMLDVDYFVFHSPY----NKLVQKSFARLFFN-DFLR 272 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~l~~~-~~~~ 272 (280)
+|+++|++++|||++|..... +..--.+.+++|+. ++.+
T Consensus 145 aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~ 188 (466)
T PLN00415 145 LFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKT 188 (466)
T ss_pred HHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceE
Confidence 479999999999999876432 33333677788885 6655
No 272
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=33.63 E-value=35 Score=32.05 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=29.7
Q ss_pred HHHHHHHHH----HHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcC
Q 023575 57 VISMSLTVV----TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG 108 (280)
Q Consensus 57 ~~~la~~Aa----~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g 108 (280)
...||..|. +-+|+++|++++|||.|+.+-..+.|.-|..+. .++++.
T Consensus 302 ~~qlAKaAi~aGi~~Ll~~agi~~~di~~v~lAG~FG~~l~~~~a~----~iGLlP 353 (412)
T PF14574_consen 302 EFQLAKAAIRAGIEILLEEAGISPEDIDRVYLAGGFGNYLDPESAI----RIGLLP 353 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--GGG--EEEEECSS-SEEEHHHHH----HTTSS-
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeCcccccCCHHHHh----hcCCCC
Confidence 345555444 567789999999999999998888876665543 555543
No 273
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=33.02 E-value=42 Score=25.78 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEeccc
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSET 88 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t 88 (280)
..-=++-+++.|++.|++|+.|.+.-+.+..
T Consensus 75 a~~Rv~~~k~~L~~~Gi~~eRv~~~~~~~~~ 105 (124)
T PF02662_consen 75 AEKRVERLKKLLEELGIEPERVRLYWISAPE 105 (124)
T ss_pred HHHHHHHHHHHHHHcCCChhHeEEEEeCccc
Confidence 3444567889999999999999988766543
No 274
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=32.99 E-value=43 Score=30.16 Aligned_cols=26 Identities=12% Similarity=0.213 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
-....+++|+++|++++|||.|.++.
T Consensus 49 l~~~i~~~l~~~~~~~~did~Iavt~ 74 (322)
T TIGR03722 49 APKLIKEALEEAGVSLEDIDAVAFSQ 74 (322)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 44559999999999999999998775
No 275
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=32.55 E-value=52 Score=30.17 Aligned_cols=26 Identities=12% Similarity=0.275 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 61 SLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
--+..++||+++++.|+|+|+|-+..
T Consensus 86 i~~~iqral~aa~~~p~dldaIAVT~ 111 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAIAVTR 111 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeEEEec
Confidence 34678999999999999999997553
No 276
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=32.34 E-value=54 Score=26.79 Aligned_cols=34 Identities=32% Similarity=0.494 Sum_probs=28.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
.++...=..+|.++++++.++++++|+.++++|+
T Consensus 32 ~~d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT 65 (176)
T PF05378_consen 32 PDDPAEGILEALDALLEESGIDPSDIDRVRHGTT 65 (176)
T ss_pred CcCHHHHHHHHHHhhhcccCCChhhCcEEEeccH
Confidence 3566667778889999999999999999999884
No 277
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=32.12 E-value=57 Score=30.16 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCC
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVI 90 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~ 90 (280)
.-.+-.+|++++++++++++++||+|=+.-.|-.
T Consensus 69 lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~ 102 (365)
T PRK09585 69 LGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVR 102 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCccCccEEEeCCcccc
Confidence 4567789999999999999999999987766644
No 278
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=31.62 E-value=1.9e+02 Score=26.46 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCCccEEE
Q 023575 57 VISMSLTVVTSLLEKYKI-DPTQIGRLE 83 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi-~~~~Id~li 83 (280)
-.++...|+++++.++|| +|.||-+|=
T Consensus 131 qV~~vA~aV~~AM~~AGI~dpaDVH~VQ 158 (366)
T TIGR02714 131 QITETAAAVKRAMRDAGIADPADVHFVQ 158 (366)
T ss_pred HHHHHHHHHHHHHHHcCCCChhHeeEEE
Confidence 467888999999999999 888887764
No 279
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=30.79 E-value=61 Score=29.97 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCC-CccEEEEec
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPT-QIGRLEVGS 86 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~-~Id~li~~t 86 (280)
..|+..+|......+++++|+++.+ |+|.|+=.|
T Consensus 63 TrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRST 97 (448)
T PF09887_consen 63 TRESVAELVRDTLLESHKKAHLDIKKDLDFVVRST 97 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCccccceEEEeec
Confidence 3578899999999999999999998 999998554
No 280
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=30.56 E-value=48 Score=31.28 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=30.7
Q ss_pred hhhcCCCC--ccCccEEecCCCChHHHHHHHHHhhhh
Q 023575 234 KLEGRQFS--MLDVDYFVFHSPYNKLVQKSFARLFFN 268 (280)
Q Consensus 234 ~L~~~gl~--~~dId~~v~Hq~n~~~~~~~~~~l~~~ 268 (280)
+++++|++ ++|||.+=+|-...-..-..++.|||.
T Consensus 302 a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~ 338 (430)
T PRK06365 302 AYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCC
Confidence 47899998 899999999999888777888999874
No 281
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=29.96 E-value=1e+02 Score=27.76 Aligned_cols=31 Identities=10% Similarity=0.150 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecc
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (280)
-.+......+++|++++++++|||.|.++..
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~G 79 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAG 79 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 3556668889999999999999999987753
No 282
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=29.86 E-value=57 Score=29.37 Aligned_cols=18 Identities=22% Similarity=0.348 Sum_probs=12.9
Q ss_pred hhhcCCCCccCccEEecC
Q 023575 234 KLEGRQFSMLDVDYFVFH 251 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~H 251 (280)
+|+|+|++.+|||+++--
T Consensus 62 al~Ka~l~~~dId~~~aG 79 (329)
T PF07451_consen 62 ALKKAGLKKEDIDYLFAG 79 (329)
T ss_dssp HHHHTT--GGG-SEEEEE
T ss_pred HHHHcCCCHHHCeEEEeh
Confidence 489999999999999853
No 283
>PF04430 DUF498: Protein of unknown function (DUF498/DUF598); InterPro: IPR007523 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This is entry represents an essential factor for the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I) []. The crystal structure of this protein revealed a 3-layer beta+alpha/beta/alpha topology [].; PDB: 2K2E_A 2Q4Q_B 2AB1_A 2FVT_A 2CYJ_A 1IHN_B 2GM2_A 3CPK_A 2FI9_A.
Probab=29.79 E-value=47 Score=24.79 Aligned_cols=46 Identities=20% Similarity=0.182 Sum_probs=27.9
Q ss_pred CCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHH
Q 023575 76 PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125 (280)
Q Consensus 76 ~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~ 125 (280)
..++|.||++|.... ..++.. +.+.+...|. .+...|..+||..|=
T Consensus 51 ~p~pe~liiGtG~~~-~~~~~~--~~~~l~~~GI-~ve~m~T~~Ac~tyN 96 (110)
T PF04430_consen 51 EPKPEVLIIGTGKRQ-LFLPPE--LREYLRKKGI-GVEVMDTPAACRTYN 96 (110)
T ss_dssp CCS-SEEEEEETTS--SECTHH--HHHHHHTTT--EEEEE-HHHHHHHHH
T ss_pred cCCCcEEEEccCCcc-ccCCHH--HHHHHHHcCC-eEEEECHHHHHHHHH
Confidence 457899999986553 333333 3356666675 477778888998763
No 284
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=29.49 E-value=47 Score=29.99 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=27.0
Q ss_pred hhcCCCCccCccEEecCCCChHHHHHHHHHhhh
Q 023575 235 LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFF 267 (280)
Q Consensus 235 L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~l~~ 267 (280)
|+.+||+.+|||+|=...+...-.-...++|++
T Consensus 330 lk~aGL~v~did~FEINEAFAsQ~~yc~~KL~l 362 (435)
T KOG1389|consen 330 LKAAGLEVDDIDLFEINEAFASQALYCRNKLGL 362 (435)
T ss_pred HHHcCCcccccceeehhHHHHHHHHHHHHHhCC
Confidence 788999999999998887776666667778875
No 285
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=28.95 E-value=2.6e+02 Score=25.27 Aligned_cols=88 Identities=14% Similarity=0.107 Sum_probs=54.5
Q ss_pred HHHHHHHcCCCCCCccEEE--EecccCC----CCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHH-------HHHH
Q 023575 65 VTSLLEKYKIDPTQIGRLE--VGSETVI----DKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTA-------ALFN 130 (280)
Q Consensus 65 a~~aL~~agi~~~~Id~li--~~t~t~~----~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~-------aL~~ 130 (280)
.-.+|+++| +..|.+|+ ++-..-+ ...|-.+..+++.|...|..+..++|++. .+.++.. +...
T Consensus 75 ~~~alr~~~--a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~~~g~d~vit~D~H~~~~~~~f~~p~~~l~~~p~ 152 (320)
T PRK02269 75 MVDALKRAS--AESINVVMPYYGYARQDRKARSREPITSKLVANMLEVAGVDRLLTVDLHAAQIQGFFDIPVDHLMGAPL 152 (320)
T ss_pred HHHHHHHhC--CCeEEEEEeccccchhhcccCCCCCchHHHHHHHHhhcCCCEEEEECCChHHHhccccCCchhhhhHHH
Confidence 335555554 56788887 3332222 12466788899999988888999999975 5555543 3333
Q ss_pred HHHHHHhcCCCCCeEEEEEecccc
Q 023575 131 CVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 131 A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
-..+++......++.+||+-|.-.
T Consensus 153 l~~~i~~~~~~~~~~vvVsPd~G~ 176 (320)
T PRK02269 153 IADYFDRRGLVGDDVVVVSPDHGG 176 (320)
T ss_pred HHHHHHHhCCCCCCcEEEEECccH
Confidence 344554321122678899988865
No 286
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=28.83 E-value=2.1e+02 Score=26.14 Aligned_cols=70 Identities=17% Similarity=0.164 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeec--cccCchHHHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKI-DPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS--TNACYGGTAALFNCVN 133 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi-~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv--~~~C~g~~~aL~~A~~ 133 (280)
-.+...+|+++++.++|| +|.||-+|=+= +| +++.. .+..... .|. .+..-|- +.+-+-+.+||-+|..
T Consensus 130 qV~~vA~aV~~aM~~AGI~dpaDVH~VQvK--cP---LLT~~-~i~~A~~-RG~-~~~t~dt~~SM~~SrgASALGvAvA 201 (365)
T PF09663_consen 130 QVEEVAAAVRAAMADAGITDPADVHFVQVK--CP---LLTSE-RIADAKA-RGK-TVATEDTYESMAYSRGASALGVAVA 201 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCChhheeeEEec--CC---cCCHH-HHHHHHh-CCC-ceeecccccccccccchhHHHHHHH
Confidence 367778899999999999 89998877432 22 23333 2333332 343 2333332 1344455556666655
Q ss_pred H
Q 023575 134 W 134 (280)
Q Consensus 134 ~ 134 (280)
+
T Consensus 202 L 202 (365)
T PF09663_consen 202 L 202 (365)
T ss_pred h
Confidence 3
No 287
>PRK13410 molecular chaperone DnaK; Provisional
Probab=27.91 E-value=1e+02 Score=30.90 Aligned_cols=68 Identities=10% Similarity=0.143 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHHHHHHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNC 131 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~aL~~A 131 (280)
..+-..+.++++|+++|+++++||.|+.+..+. .+|.....+...+ |.+ +...++. -|.+...|+..+
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss--RiP~V~~~l~~~f---g~~--~~~~~npdeaVA~GAAi~aa 375 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGST--RMPMVQQLVRTLI---PRE--PNQNVNPDEVVAVGAAIQAG 375 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc--ccHHHHHHHHHHc---CCC--cccCCCCchHHHHhHHHHHH
Confidence 345556678899999999999999999764433 3576666555444 321 2233443 455555555443
No 288
>PF02817 E3_binding: e3 binding domain; InterPro: IPR004167 A small domain of the E2 subunit of 2-oxo-acid dehydrogenases that is responsible for the binding of the E3 subunit. Proteins containing this domain include the branched-chain alpha-keto acid dehydrogenase complex of bacteria, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide; and the E-3 binding protein of eukaryotic pyruvate dehydrogenase.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1BBL_A 1W4H_A 1BAL_A 2WXC_A 2BTH_A 2BTG_A 2CYU_A 2EQ7_C 2EQ8_C 3RNM_E ....
Probab=26.74 E-value=43 Score=20.13 Aligned_cols=18 Identities=22% Similarity=0.292 Sum_probs=12.8
Q ss_pred HHHHHHHHHcCCCCCCcc
Q 023575 63 TVVTSLLEKYKIDPTQIG 80 (280)
Q Consensus 63 ~Aa~~aL~~agi~~~~Id 80 (280)
-+++++.++.|+++++|.
T Consensus 7 P~ar~la~e~gidl~~v~ 24 (39)
T PF02817_consen 7 PAARKLAAELGIDLSQVK 24 (39)
T ss_dssp HHHHHHHHHTT--GGGSS
T ss_pred HHHHHHHHHcCCCccccc
Confidence 468899999999888664
No 289
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=26.52 E-value=20 Score=31.84 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=18.7
Q ss_pred hhhcCCCCccCccEEecCCCC
Q 023575 234 KLEGRQFSMLDVDYFVFHSPY 254 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq~n 254 (280)
+|+++|+++.|||-|=+|.+.
T Consensus 353 ll~kagltlkdid~feiheaf 373 (465)
T KOG1392|consen 353 LLDKAGLTLKDIDVFEIHEAF 373 (465)
T ss_pred HHHHcCCcccccchhhhHHHH
Confidence 389999999999999999764
No 290
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=26.08 E-value=1.4e+02 Score=27.38 Aligned_cols=29 Identities=28% Similarity=0.326 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
.+-.....+++|+++|++++|||.|.++.
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~ 78 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTK 78 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 34445678899999999999999997664
No 291
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=25.98 E-value=2.6e+02 Score=27.80 Aligned_cols=45 Identities=7% Similarity=0.163 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFE 105 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~ 105 (280)
+=..+.++++|+++++.+++||.|+.+..+. .+|.....+...++
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~fg 353 (616)
T PRK05183 309 KRTLLACRRALRDAGVEADEVKEVVMVGGST--RVPLVREAVGEFFG 353 (616)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEECCcc--cChHHHHHHHHHhc
Confidence 3445667899999999999999999775433 35777776666554
No 292
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=25.21 E-value=1.6e+02 Score=29.55 Aligned_cols=65 Identities=9% Similarity=0.071 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHHHHHH
Q 023575 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFN 130 (280)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~aL~~ 130 (280)
+=....++++|+++++++++||.|+.+..+. .+|.....+...++. + +...++- -|.+...|+..
T Consensus 334 ~r~~~~v~~~L~~a~~~~~dId~VvLVGGss--riP~V~~~l~~~fg~---~--~~~~~nPdeaVA~GAAi~a 399 (657)
T PTZ00186 334 ERSIAPCKQCMKDAGVELKEINDVVLVGGMT--RMPKVVEEVKKFFQK---D--PFRGVNPDEAVALGAATLG 399 (657)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCcc--cChHHHHHHHHHhCC---C--ccccCCCchHHHHhHHHHH
Confidence 3445667899999999999999999764332 357777666655532 1 1223443 45555545443
No 293
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=24.87 E-value=2.7e+02 Score=27.57 Aligned_cols=46 Identities=9% Similarity=0.221 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFE 105 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~ 105 (280)
.+=..+.++++|+++++++++||.|+.+..+. .+|.....+.+.++
T Consensus 292 l~~i~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~V~~~l~~~f~ 337 (599)
T TIGR01991 292 VQKTLSICRRALRDAGLSVEEIKGVVLVGGST--RMPLVRRAVAELFG 337 (599)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEECCcC--CChHHHHHHHHHhC
Confidence 34455677899999999999999999765433 35777766665553
No 294
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=24.48 E-value=1.4e+02 Score=22.27 Aligned_cols=60 Identities=18% Similarity=0.211 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~ 125 (280)
..++..+-...++.. + .+|.||++|..... .|+.. +...+...|. .+...|..++|..|=
T Consensus 36 ~~~l~~~~l~~~~~~---~--~peiliiGTG~~~~-~~~~~--~~~~l~~~gI-~vE~m~T~aAcrTyN 95 (109)
T cd00248 36 LSDLDPEALLPLLAE---D--RPDILLIGTGAEIA-FLPRA--LRAALRAAGI-GVEVMSTGAACRTYN 95 (109)
T ss_pred cccCCHHHHHHHHhh---C--CCCEEEEcCCCCCC-cCCHH--HHHHHHHcCC-eEEEeCcHHHHHHHH
Confidence 445555555556553 2 48899999865442 34333 3356666665 477788888888763
No 295
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=23.99 E-value=1.3e+02 Score=26.99 Aligned_cols=112 Identities=17% Similarity=0.127 Sum_probs=60.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCC-ccEEEEecccCCCCCCchHHHHHHHHHh-cCCCCeeeeeccccCchHHHHHHH
Q 023575 53 EVEDVISMSLTVVTSLLEKYKIDPTQ-IGRLEVGSETVIDKSKSIKTFLMQIFEK-YGNTDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 53 ~~e~~~~la~~Aa~~aL~~agi~~~~-Id~li~~t~t~~~~~p~~a~~l~~~l~~-~g~~~~~~~dv~~~C~g~~~aL~~ 130 (280)
+.+...+=..++.++|++++|+++.. +..|.+.=+..++ |...-.+.+.++. .+ ..+.-|-+++--.
T Consensus 41 g~~~~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~--e~~~~~lv~~~R~~fp-s~ae~~~v~sDa~-------- 109 (336)
T KOG1794|consen 41 GSTTCASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQ--EDKNRKLVTEFRDKFP-SVAENFYVTSDAD-------- 109 (336)
T ss_pred CchHHHHHHHHHHHHHHhhcCCCccCccceeeeecccCCc--hhHHHHHHHHHHHhcc-chhheeeeehhHH--------
Confidence 34556666778899999999999999 8888765333332 3333344444433 21 1233344443111
Q ss_pred HHHHHHh--cCCCCCeEEEEEeccc-cc--cCCC------CCcccCCceEEEEECCCC
Q 023575 131 CVNWVES--ASWDGRYGLVVCTDSA-VY--AEGP------ARPTGGAAAVAMLIGPDA 177 (280)
Q Consensus 131 A~~~l~~--g~~~~~~vLvv~~e~~-s~--~~~~------~~~~fGDgAaA~ll~~~~ 177 (280)
..+..+ |. .+.-||+-+.+.. .. .|.. .....||++.|.-+++..
T Consensus 110 -~sl~a~t~g~-~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 110 -GSLAAATPGG-EGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred -HHHhhcCCCC-CCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 111111 11 1244555554433 22 2321 245789999999888753
No 296
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=23.83 E-value=1e+02 Score=28.44 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCccCccEEecCC
Q 023575 219 MALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHS 252 (280)
Q Consensus 219 ~~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq 252 (280)
+.+.++++... .+.+++++++.+|+|+++=..
T Consensus 63 esV~elV~dtl--~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 63 ESVAELVKDTL--KESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred HHHHHHHHHHH--HHHHHHcCCChhhccEEEecc
Confidence 34444444333 256999999999999888654
No 297
>PRK05788 cobalamin biosynthesis protein CbiG; Validated
Probab=23.65 E-value=1e+02 Score=27.89 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=30.5
Q ss_pred eeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEe
Q 023575 38 KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (280)
Q Consensus 38 ~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (280)
.+.-|+|.|+ - ...+...+|.+++|+++|+++++|+.|...
T Consensus 194 ~l~vGIGcrr--g-----~~~e~i~~ai~~~L~~~~i~~~~i~~iati 234 (315)
T PRK05788 194 NVVLGIGCRK--G-----VSAEEIAEAVERALEALNIDPRAVKAIASI 234 (315)
T ss_pred eEEEeeccCC--C-----CCHHHHHHHHHHHHHHcCCCHHHccEEeee
Confidence 3446888764 1 234456789999999999999999998544
No 298
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=23.47 E-value=4.2e+02 Score=21.88 Aligned_cols=85 Identities=4% Similarity=-0.072 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHH----HHcCCCCCCccEEEEecccCCCCCCchHHH--HHHHHHhcCCCCeeeeeccccCchHHHHHHH
Q 023575 57 VISMSLTVVTSLL----EKYKIDPTQIGRLEVGSETVIDKSKSIKTF--LMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (280)
Q Consensus 57 ~~~la~~Aa~~aL----~~agi~~~~Id~li~~t~t~~~~~p~~a~~--l~~~l~~~g~~~~~~~dv~~~C~g~~~aL~~ 130 (280)
-.+.+..++...+ ++ ..-+.|+.|.++...+....|.+..+ +...|+.. +.. |=..+..||.+
T Consensus 25 RL~aak~~i~~~~~~f~~~--np~~~vGlv~fag~~a~v~~plT~D~~~~~~~L~~i--------~~~-g~~~l~~AL~~ 93 (187)
T cd01452 25 RFQAQADAVNLICQAKTRS--NPENNVGLMTMAGNSPEVLVTLTNDQGKILSKLHDV--------QPK-GKANFITGIQI 93 (187)
T ss_pred HHHHHHHHHHHHHHHHHhc--CCCccEEEEEecCCceEEEECCCCCHHHHHHHHHhC--------CCC-CcchHHHHHHH
Confidence 4556666666553 43 24458999998874444344443322 22222211 122 44578899999
Q ss_pred HHHHHHhcCC--CCCe-EEEEEecc
Q 023575 131 CVNWVESASW--DGRY-GLVVCTDS 152 (280)
Q Consensus 131 A~~~l~~g~~--~~~~-vLvv~~e~ 152 (280)
|...++.... ..++ +++++++.
T Consensus 94 A~~~L~~~~~~~~~~rivi~v~S~~ 118 (187)
T cd01452 94 AQLALKHRQNKNQKQRIVAFVGSPI 118 (187)
T ss_pred HHHHHhcCCCcCCcceEEEEEecCC
Confidence 9999975421 1135 55556653
No 299
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=23.30 E-value=3.2e+02 Score=24.46 Aligned_cols=86 Identities=16% Similarity=0.100 Sum_probs=55.7
Q ss_pred HHHHHHcCCCCCCccEEE--EecccCC----CCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHH-------HHHHHH
Q 023575 66 TSLLEKYKIDPTQIGRLE--VGSETVI----DKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGT-------AALFNC 131 (280)
Q Consensus 66 ~~aL~~agi~~~~Id~li--~~t~t~~----~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~-------~aL~~A 131 (280)
-.++.++ .+..|.+|+ ++...-+ ...|-.+..+++.|...|..+...+|++. ...+|. ++...-
T Consensus 60 ~~a~r~~--~a~~i~~ViPYl~YaRQDr~~~~~e~isak~va~lL~~~g~d~vitvD~H~~~~~~~f~~p~~~l~~~~~l 137 (304)
T PRK03092 60 IDALKRA--SAKRITVVLPFYPYARQDKKHRGREPISARLVADLFKTAGADRIMTVDLHTAQIQGFFDGPVDHLFAMPLL 137 (304)
T ss_pred HHHHHHc--CCCeEEEEEecccccccccccCCCCCccHHHHHHHHHhcCCCeEEEEecChHHHHhhcCCCeeeEechHHH
Confidence 3555554 467888888 3332222 12366788899999988888899999985 444443 344444
Q ss_pred HHHHHhcCCCCCeEEEEEecccc
Q 023575 132 VNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 132 ~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
..+++... ..++.+||+-|.-+
T Consensus 138 a~~i~~~~-~~~~~vvVspd~Ga 159 (304)
T PRK03092 138 ADYVRDKY-DLDNVTVVSPDAGR 159 (304)
T ss_pred HHHHHHhc-CCCCcEEEEecCch
Confidence 56665432 23778889988765
No 300
>KOG3363 consensus Uncharacterized conserved nuclear protein [Function unknown]
Probab=23.20 E-value=1.2e+02 Score=24.72 Aligned_cols=46 Identities=22% Similarity=0.177 Sum_probs=30.1
Q ss_pred CCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchH
Q 023575 77 TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGG 124 (280)
Q Consensus 77 ~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~ 124 (280)
..||.||++...-- ..|.....+.+.++..|. ....+|-.++|+.|
T Consensus 110 PkidlLIvG~Gd~~-~p~~v~~~V~~F~k~~ki-~lEi~dte~A~aTf 155 (196)
T KOG3363|consen 110 PKIDLLIVGCGDKK-HPDKVRPSVRQFVKSHKI-KLEIVDTENAAATF 155 (196)
T ss_pred CCccEEEEecCCcC-CchhcCHHHHHHHHHhCc-ceEEecchhhhhHh
Confidence 36999998853221 222344555566776665 47788999999987
No 301
>PLN03184 chloroplast Hsp70; Provisional
Probab=22.67 E-value=1.6e+02 Score=29.58 Aligned_cols=66 Identities=14% Similarity=0.129 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccc-cCchHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFN 130 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~~~aL~~ 130 (280)
.+-..+.++++|+++++++++||.|+++..+. .+|.....+...++. . +...++. -|.+...|++.
T Consensus 345 ~~r~~~~i~~~L~~a~~~~~dId~ViLvGGss--riP~V~~~i~~~fg~---~--~~~~~npdeaVA~GAAi~a 411 (673)
T PLN03184 345 LDRCKTPVENALRDAKLSFKDIDEVILVGGST--RIPAVQELVKKLTGK---D--PNVTVNPDEVVALGAAVQA 411 (673)
T ss_pred HHHHHHHHHHHHHHcCCChhHccEEEEECCcc--ccHHHHHHHHHHhCC---C--cccccCcchHHHHHHHHHH
Confidence 34455668899999999999999999765433 357777666555532 1 2233443 45544445443
No 302
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=22.40 E-value=1.4e+02 Score=22.30 Aligned_cols=59 Identities=17% Similarity=0.149 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHH
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~ 125 (280)
..++..+-...+++. +.|.||++|..... .|+.+ +.+.+...|. .+.+.|..++|..|=
T Consensus 37 ~~~l~~e~l~~l~~~------~peiliiGTG~~~~-~~~~~--~~~~l~~~gi-~vE~m~T~~AcrTyN 95 (109)
T cd05560 37 FEDLTAAHFEALLAL------QPEVILLGTGERQR-FPPPA--LLAPLLARGI-GVEVMDTQAACRTYN 95 (109)
T ss_pred cccCCHHHHHHHHhc------CCCEEEEecCCCCC-cCCHH--HHHHHHHcCC-eEEEECHHHHHHHHH
Confidence 344555555556553 25788888765442 34322 2346666665 477788888988764
No 303
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=21.94 E-value=1.3e+02 Score=27.59 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCccCccEEecCCC
Q 023575 220 ALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSP 253 (280)
Q Consensus 220 ~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~Hq~ 253 (280)
.++.....+. ++|+++|++.+|||.+.+-++
T Consensus 50 H~e~i~~li~---~al~eA~~~~~dID~IA~T~g 80 (342)
T COG0533 50 HVENIPPLIE---EALAEAGVSLEDIDAIAVTAG 80 (342)
T ss_pred HHHHHHHHHH---HHHHHcCCCcccCCEEEEecC
Confidence 3344444443 459999999999999999874
No 304
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=21.80 E-value=2.3e+02 Score=22.46 Aligned_cols=15 Identities=13% Similarity=0.124 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHcCC
Q 023575 60 MSLTVVTSLLEKYKI 74 (280)
Q Consensus 60 la~~Aa~~aL~~agi 74 (280)
-..+-+.++|+++|+
T Consensus 27 ~gakvia~~l~d~Gf 41 (143)
T COG2185 27 RGAKVIARALADAGF 41 (143)
T ss_pred cchHHHHHHHHhCCc
Confidence 334445556666553
No 305
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=21.58 E-value=1.9e+02 Score=28.64 Aligned_cols=46 Identities=7% Similarity=0.184 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHH
Q 023575 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFE 105 (280)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~ 105 (280)
.+=..+.++++|+++++.+.+||.|+.+..+.. +|.....+...++
T Consensus 306 ~~~~~~~i~~~l~~a~~~~~~id~ViLvGGssr--iP~v~~~l~~~fg 351 (627)
T PRK00290 306 VERTIEPCKQALKDAGLSVSDIDEVILVGGSTR--MPAVQELVKEFFG 351 (627)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECCcCC--ChHHHHHHHHHhC
Confidence 344556678999999999999999997654433 5777776666553
No 306
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=21.51 E-value=1.9e+02 Score=25.12 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=17.1
Q ss_pred hhhcCCCCccCccEEecCC
Q 023575 234 KLEGRQFSMLDVDYFVFHS 252 (280)
Q Consensus 234 ~L~~~gl~~~dId~~v~Hq 252 (280)
.|++++++.+|||.+.+..
T Consensus 60 al~ea~v~~~diD~icyTK 78 (336)
T KOG2708|consen 60 ALEEAGVTSDDIDCICYTK 78 (336)
T ss_pred HHHHcCCChhhCCEEEEcC
Confidence 4899999999999999875
No 307
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed
Probab=21.48 E-value=2.9e+02 Score=24.54 Aligned_cols=20 Identities=20% Similarity=0.415 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHcCCCCCCc
Q 023575 60 MSLTVVTSLLEKYKIDPTQI 79 (280)
Q Consensus 60 la~~Aa~~aL~~agi~~~~I 79 (280)
...++.+++|.+.+++|+|.
T Consensus 27 ~il~~l~~al~~l~~~p~d~ 46 (286)
T PRK11867 27 SILAALQRALAELGLDPENV 46 (286)
T ss_pred HHHHHHHHHHHHhCCCCCcE
Confidence 36789999999999999875
No 308
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=20.60 E-value=95 Score=28.69 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecccC
Q 023575 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETV 89 (280)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~ 89 (280)
.-++-.+|+++.|+++++++++||+|=+...|-
T Consensus 66 lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv 98 (364)
T PF03702_consen 66 LGELFADAVNQFLKKNGISPSDIDLIGSHGQTV 98 (364)
T ss_dssp HHHHHHHHHHHHHHHCT--GGGEEEEEE--EEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccccEEEeCCcce
Confidence 446778999999999999999999998666553
No 309
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=20.51 E-value=3.7e+02 Score=24.02 Aligned_cols=95 Identities=13% Similarity=0.127 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCccEEE--EecccCC---C-CCCchHHHHHHHHHhcCCCCeeeeeccc-cCchH--
Q 023575 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLE--VGSETVI---D-KSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGG-- 124 (280)
Q Consensus 54 ~e~~~~la~~Aa~~aL~~agi~~~~Id~li--~~t~t~~---~-~~p~~a~~l~~~l~~~g~~~~~~~dv~~-~C~g~-- 124 (280)
++...+|.. .-.+++++| +..|.+|+ ++-..-+ . ..|-.+..+++.|...|..+...+|++. ...++
T Consensus 62 ~~~l~el~~--~~~a~r~~g--a~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~~~g~d~vit~DlHs~~~~~~f~ 137 (308)
T TIGR01251 62 NDNLMELLI--MIDALKRAS--AKSITAVIPYYGYARQDKKFKSREPISAKLVANLLETAGADRVLTVDLHSPQIQGFFD 137 (308)
T ss_pred cHHHHHHHH--HHHHHHHcC--CCeEEEEEEecccchhccccCCCCCchHHHHHHHHHHcCCCEEEEecCChHHhcCcCC
Confidence 444444433 345666665 55788887 3332222 1 2366788899999988888899999875 33333
Q ss_pred -----HHHHHHHHHHHHhcCCCCCeEEEEEecccc
Q 023575 125 -----TAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (280)
Q Consensus 125 -----~~aL~~A~~~l~~g~~~~~~vLvv~~e~~s 154 (280)
+.+......+++... .++.+||+-|...
T Consensus 138 ip~~~l~a~~~l~~~i~~~~--~~~~viv~pd~g~ 170 (308)
T TIGR01251 138 VPVDNLYASPVLAEYLKKKI--LDNPVVVSPDAGG 170 (308)
T ss_pred CceecccCHHHHHHHHHhhC--CCCCEEEEECCch
Confidence 444444556665542 2678888888765
No 310
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=20.41 E-value=1.1e+02 Score=23.65 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=53.4
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCC-CCeeeeccCceeeecCCCCCCHHHHHHHHHHHHHHHcCCCCCCccEEEEec
Q 023575 8 NVGILALDIYFPPTCVLQEALEVHDGVS-KGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (280)
Q Consensus 8 ~~~I~~ig~~lP~~~v~~~~~~~~~g~~-~~~~~~~ig~r~~~~~~~~e~~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (280)
+++|.-+=+ .-+|..+.+.+.+.-- +..+..|-..-..++-.-+..+ .==.+.++++|++-||+++.|+.+....
T Consensus 29 ~vRiIrv~C---sGrvn~~fvl~Al~~GaDGV~v~GC~~geCHy~~GN~ka-~rR~~~lke~l~elgie~eRv~~~wiSa 104 (132)
T COG1908 29 NVRIIRVMC---SGRVNPEFVLKALRKGADGVLVAGCKIGECHYISGNYKA-KRRMELLKELLKELGIEPERVRVLWISA 104 (132)
T ss_pred ceEEEEeec---cCccCHHHHHHHHHcCCCeEEEecccccceeeeccchHH-HHHHHHHHHHHHHhCCCcceEEEEEEeh
Confidence 466654433 2366777777665322 2333333222234453333333 3334778999999999999999998776
Q ss_pred ccCCCCCCchHHHHHHHHHhcC
Q 023575 87 ETVIDKSKSIKTFLMQIFEKYG 108 (280)
Q Consensus 87 ~t~~~~~p~~a~~l~~~l~~~g 108 (280)
.-++-..-...-++ +.+..+|
T Consensus 105 ~E~ekf~e~~~efv-~~i~~lG 125 (132)
T COG1908 105 AEGEKFAETINEFV-ERIKELG 125 (132)
T ss_pred hhHHHHHHHHHHHH-HHHHHhC
Confidence 65553322233333 3444445
No 311
>cd05125 Mth938_2P1-like Mth938_2P1-like domain. This model contains sequences that are similar to 2P1, a partially characterized nuclear protein, which is homologous to E3-3 from rat and known to be alternatively spliced. Its function is unknown. This family is part of the Mth938 family, for which structures, but no functional data are available.
Probab=20.32 E-value=1.3e+02 Score=22.85 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCccEEEEecccCCCCCCchHHHHHHHHHhcCCCCeeeeeccccCchHH
Q 023575 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125 (280)
Q Consensus 56 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~l~~~l~~~g~~~~~~~dv~~~C~g~~ 125 (280)
+..++..+....++.- . .++|.||++|.... ..++.. +...+...|. .+.+.|..++|..|=
T Consensus 36 ~~~~l~~~~l~~l~~~---~-~~peiliiGtG~~~-~~~~~~--~~~~l~~~gi-~vevm~T~~AcrtyN 97 (114)
T cd05125 36 SFEDITEESLSLFELL---E-PRPEILVIGTGRKS-RPLSPE--LRKYFKKLGI-AVEVVDTRNACATFN 97 (114)
T ss_pred ChhhCCHHHHHHHHhc---c-CCCCEEEEccCCCC-CcCCHH--HHHHHHHcCC-EEEEECHHHHHHHHH
Confidence 3445555554444432 2 37899999986653 233332 2245666665 477778888888763
Done!