Your job contains 1 sequence.
>023576
MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK
SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD
GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP
QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN
ELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFARG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023576
(280 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061072 - symbol:RPA2 "replicon protein A2" sp... 779 2.1e-77 1
UNIPROTKB|Q6H7J5 - symbol:OJ1643_A10.19 "Putative replica... 532 3.1e-51 1
UNIPROTKB|Q9AVM2 - symbol:OsRPA32 "Replication protein A ... 518 9.5e-50 1
UNIPROTKB|Q5Z8L1 - symbol:P0550B04.15 "Putative replicati... 295 8.8e-30 2
RGD|619714 - symbol:Rpa2 "replication protein A2" species... 290 1.4e-25 1
UNIPROTKB|E2RQP7 - symbol:RPA2 "Uncharacterized protein" ... 289 1.8e-25 1
UNIPROTKB|G4MT45 - symbol:MGG_07124 "Replication protein ... 278 2.6e-24 1
UNIPROTKB|P15927 - symbol:RPA2 "Replication protein A 32 ... 276 4.2e-24 1
UNIPROTKB|Q2KI86 - symbol:RPA2 "Uncharacterized protein" ... 275 5.3e-24 1
POMBASE|SPCC1753.01c - symbol:ssb2 "single-stranded DNA b... 273 8.7e-24 1
UNIPROTKB|Q5RC43 - symbol:RPA2 "Replication protein A 32 ... 272 1.1e-23 1
UNIPROTKB|F1STM9 - symbol:RPA2 "Uncharacterized protein" ... 271 1.4e-23 1
ASPGD|ASPL0000062650 - symbol:AN0582 species:162425 "Emer... 270 1.8e-23 1
MGI|MGI:1339939 - symbol:Rpa2 "replication protein A2" sp... 270 1.8e-23 1
ZFIN|ZDB-GENE-010131-3 - symbol:rpa2 "replication protein... 270 1.8e-23 1
UNIPROTKB|Q5ZLH1 - symbol:RPA2 "Uncharacterized protein" ... 269 2.3e-23 1
CGD|CAL0006323 - symbol:RFA2 species:5476 "Candida albica... 261 1.6e-22 1
UNIPROTKB|Q59Z33 - symbol:RFA2 "Putative uncharacterized ... 261 1.6e-22 1
UNIPROTKB|Q5TEJ7 - symbol:RPA2 "Replication protein A 32 ... 209 5.3e-17 1
SGD|S000005256 - symbol:RFA2 "Subunit of heterotrimeric R... 207 8.6e-17 1
FB|FBgn0032906 - symbol:RPA2 "Replication protein A2" spe... 194 2.0e-15 1
UNIPROTKB|Q13156 - symbol:RPA4 "Replication protein A 30 ... 138 4.4e-11 2
WB|WBGene00019767 - symbol:rpa-2 species:6239 "Caenorhabd... 154 6.0e-09 1
UNIPROTKB|Q95Y97 - symbol:rpa-2 "Protein RPA-2" species:6... 154 6.0e-09 1
UNIPROTKB|Q5TEJ0 - symbol:RPA2 "Replication protein A 32 ... 108 1.1e-05 1
>TAIR|locus:2061072 [details] [associations]
symbol:RPA2 "replicon protein A2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006260 "DNA replication" evidence=IGI;ISS;RCA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0016458 "gene silencing" evidence=RCA;IMP]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009555 "pollen
development" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016458
EMBL:AC006403 EMBL:DQ284987 EMBL:AK117537 EMBL:BT005433
EMBL:AY088525 IPI:IPI00548871 PIR:C84637 RefSeq:NP_001118376.1
RefSeq:NP_565571.1 UniGene:At.13816 HSSP:P15927
ProteinModelPortal:Q9ZQ19 SMR:Q9ZQ19 IntAct:Q9ZQ19 STRING:Q9ZQ19
PaxDb:Q9ZQ19 PRIDE:Q9ZQ19 EnsemblPlants:AT2G24490.1
EnsemblPlants:AT2G24490.2 GeneID:816985 KEGG:ath:AT2G24490
TAIR:At2g24490 eggNOG:COG5235 HOGENOM:HOG000265427
InParanoid:Q9ZQ19 KO:K10739 OMA:GGNSFMP PhylomeDB:Q9ZQ19
ProtClustDB:CLSN2719507 Genevestigator:Q9ZQ19 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949 Uniprot:Q9ZQ19
Length = 279
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 155/280 (55%), Positives = 211/280 (75%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFSSSQF+ ++ FSGGGFM SQP Q+ + SSTA++RD QGLVPVTVK I+E S +K
Sbjct: 1 MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60
Query: 61 SNFMINGLEITNVTLVGLVYNKEE-RASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
S +ING+ +TNV+LVGLV +K+E + ++V FTLDDGTGR+ CKRW SE FD REME+++
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
DG YVRL G+LK+FQGK Q++ FSVRP+ +F+EVT HYIECI+F+ QNS+SQ Q Q
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQ-----Q 175
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTN--LSSQFGV-DGLKDCDQMILDYLQQPSSSERERG 236
V S+NT+ + G + Q N +SSQ +G K+ D MILDYL+QP+ + R++G
Sbjct: 176 VGDVTQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQG 235
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+H++E+++QLKIP+ K+ + SLE +GLIYSTIDE+H+K
Sbjct: 236 IHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275
>UNIPROTKB|Q6H7J5 [details] [associations]
symbol:OJ1643_A10.19 "Putative replication protein A2"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR004365 Pfam:PF01336
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP008208
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 OMA:QGFIYPT EMBL:AP004192
EMBL:AK073723 RefSeq:NP_001047510.1 UniGene:Os.15035 IntAct:Q6H7J5
STRING:Q6H7J5 EnsemblPlants:LOC_Os02g42230.1 GeneID:4330068
KEGG:osa:4330068 Uniprot:Q6H7J5
Length = 298
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 116/280 (41%), Positives = 172/280 (61%)
Query: 8 DASNAFSGGGFMPSQPPQSADYPSSTA----RSRDSQGLVPVTVKMISEASHSGDDKSNF 63
+AS+ F GGGFMPSQ +A+ S +SR++Q L+P+TVK I +AS + DDKSNF
Sbjct: 20 NASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNF 79
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
+NG+E++ V LVG + NK +R +DV+FTLDDGTGRV RW ++ DT+EM IQ+G Y
Sbjct: 80 AVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGDY 139
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ--NSKSQVQ-----GFP 176
V + G LK FQGK+Q+VA+SVR +TNF++VT H++ C++ HL+ KSQV G P
Sbjct: 140 VIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATGTP 199
Query: 177 SSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERG 236
+ + N S T + +AP N + G D ++L+ P+ + G
Sbjct: 200 NQTMPRDSMAYNQSPLTNQASTFSAPQNTGT-----GTNMID-LVLNVFHDPAVMNDDHG 253
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
V V+ +S +L +P++ + I + G +Y+TID+ HYK
Sbjct: 254 VGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYK 293
>UNIPROTKB|Q9AVM2 [details] [associations]
symbol:OsRPA32 "Replication protein A 30kDa" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HSSP:P15927
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 EMBL:AB037145 ProteinModelPortal:Q9AVM2
IntAct:Q9AVM2 STRING:Q9AVM2 Gramene:Q9AVM2 Uniprot:Q9AVM2
Length = 279
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 118/281 (41%), Positives = 182/281 (64%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSG--DDK-SNF 63
F +AFS F SQ +AD ++ ++SR + +P+TVK ISEA SG +K + F
Sbjct: 4 FSQPDAFSPSQFTSSQNA-AAD-STTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPF 61
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
+++G+E NV LVGLV K ER +DV+F +DDGTGR+ RW ++ D+ E A+Q+GMY
Sbjct: 62 VVDGVETANVRLVGLVSGKTERNTDVSFMIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 121
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V +IG+LK Q +K+ AF++RPVT+++EVT H+I+C+ HL+N+KSQ+ G P+
Sbjct: 122 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQI-GSPAK----T 176
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQ----FGV-DGLK-DCDQMILDYLQQPSSSERERGV 237
S++ +S+ G S T PT++ S V +G K D + +L+ ++P++ E E GV
Sbjct: 177 YSAMGSSSSNGFSE-MTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGV 235
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
H++E+ ++L++P+ KI +I L + G IYSTIDE HYK A
Sbjct: 236 HIDEIVKRLRLPEAKIKVAIDYLADIGHIYSTIDESHYKSA 276
>UNIPROTKB|Q5Z8L1 [details] [associations]
symbol:P0550B04.15 "Putative replication protein A2"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AP003770 ProteinModelPortal:Q5Z8L1
IntAct:Q5Z8L1 KEGG:dosa:Os06t0693300-01 Gramene:Q5Z8L1
Uniprot:Q5Z8L1
Length = 438
Score = 295 (108.9 bits), Expect = 8.8e-30, Sum P(2) = 8.8e-30
Identities = 65/150 (43%), Positives = 96/150 (64%)
Query: 32 STARSRDSQ--GLVPVTVKMISE------ASHSGDDKSNFMINGLEITNVTLVGLVYNKE 83
S ++ RD + G VP TV IS A+ G D F I+G+E TNV ++G V +
Sbjct: 38 SPSKPRDPRFSGCVPATVLHISRSFAAALAADGGGDPV-FSIDGVETTNVRVLGRVVSVV 96
Query: 84 ERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFS 143
R +DV FTLDD TG++ RW ++ DTR+ IQ+G+YV++ NL FQ KKQ +A S
Sbjct: 97 SRDTDVCFTLDDSTGKIPLVRWITDQSDTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARS 156
Query: 144 VRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+RP+ NF+EV H+IEC++ HL++ +S++Q
Sbjct: 157 IRPINNFNEVVLHFIECMHVHLESVQSKMQ 186
Score = 51 (23.0 bits), Expect = 8.8e-30, Sum P(2) = 8.8e-30
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 180 PQMVDSSL-NTSARTGLSGYQ---TAPTNLSSQFGVDGLK-DCDQMILDYLQQPSS--SE 232
P V ++L N +A +G Q T S+ GL+ D +M+L+ LQQP S
Sbjct: 324 PPAVQTNLYNHAASSGGVREQVHLTQANQFSAYSSTGGLQHDPQRMVLEALQQPDILLSN 383
Query: 233 RERGVHVNELSEQLKIPQKKI 253
E + +N L E+L+ P++ +
Sbjct: 384 MEHTL-MNWL-EELECPKQTL 402
>RGD|619714 [details] [associations]
symbol:Rpa2 "replication protein A2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005662 "DNA replication factor A complex"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IC]
[GO:0006284 "base-excision repair" evidence=NAS] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISO;ISS] [GO:0016605 "PML body" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IMP] [GO:0005730 "nucleolus"
evidence=ISO] RGD:619714 GO:GO:0006284 GO:GO:0016605 GO:GO:0006260
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310 GO:GO:0003697
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0047485
GO:GO:0010569 GO:GO:0005662 eggNOG:COG5235 KO:K10739 OMA:GGNSFMP
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 CTD:6118 HOGENOM:HOG000216562 HOVERGEN:HBG000086
OrthoDB:EOG4WQ13T EMBL:BC079180 EMBL:X98490 IPI:IPI00210011
RefSeq:NP_067593.1 UniGene:Rn.40389 ProteinModelPortal:Q63528
SMR:Q63528 STRING:Q63528 PRIDE:Q63528 Ensembl:ENSRNOT00000017549
GeneID:59102 KEGG:rno:59102 UCSC:RGD:619714
GeneTree:ENSGT00390000010045 InParanoid:Q63528 NextBio:611723
Genevestigator:Q63528 GermOnline:ENSRNOG00000013005 Uniprot:Q63528
Length = 270
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 84/279 (30%), Positives = 143/279 (51%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
FSSS + A+ + S GGF S P A+ S R+R +Q +VP T+ + A+ + D+
Sbjct: 9 FSSSSYGAAGGYTQSPGGF-GSPTPSQAEKKS---RAR-AQHIVPCTISQLLSATLT-DE 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 V--FKIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + HL SK+ Q
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHLMLSKANSQA-SVG 179
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+P M + + SG P N GL +L+ ++ + R G++
Sbjct: 180 RPSMSNPGMGEPGN--FSGNNFMPAN--------GLTVVQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLRSQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFK 265
>UNIPROTKB|E2RQP7 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 OMA:GGNSFMP InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949
GeneTree:ENSGT00390000010045 EMBL:AAEX03001704
Ensembl:ENSCAFT00000019035 NextBio:20860941 Uniprot:E2RQP7
Length = 293
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 81/280 (28%), Positives = 143/280 (51%)
Query: 2 FSSSQFDASNAFSG-GGFMPSQPPQSADYPSSTAR-SRD-SQGLVPVTVKMISEASHSGD 58
F S+ S+AFSG GG+ S + PS + SR +Q +VP T+ + A+ D
Sbjct: 27 FGGSESYGSSAFSGAGGYTQSPGGFGSPTPSQAEKKSRARAQHIVPCTISQLLSATLV-D 85
Query: 59 DKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEA 117
+ F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E
Sbjct: 86 EM--FKIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTV 143
Query: 118 IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS 177
+ YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS Q P+
Sbjct: 144 VPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTAHILEVVNAHMILSKSNSQP-PA 202
Query: 178 SQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGV 237
+ + + + + G G + P N GL +L+ ++ + R G+
Sbjct: 203 GRAPISNPGMGETGNFG--GISSIPAN--------GLTVAQNQVLNLIK---ACPRPEGL 249
Query: 238 HVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ +L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 250 NFQDLKNQLQHMSVASIKQAVDFLSNEGHIYSTVDDDHFK 289
>UNIPROTKB|G4MT45 [details] [associations]
symbol:MGG_07124 "Replication protein A 32 kDa subunit"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004365 Pfam:PF01336 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CM001232 KO:K10739
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 RefSeq:XP_003715317.1 EnsemblFungi:MGG_07124T0
GeneID:2683246 KEGG:mgr:MGG_07124 Uniprot:G4MT45
Length = 275
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 79/273 (28%), Positives = 129/273 (47%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKS 61
FS + ++A A GGGFM S P +S + L PVTVK + + D +
Sbjct: 9 FSRTGYNAQGAEDGGGFMGGSQQGSQGGPGG--KSYQDECLKPVTVKQLLDVQAPYPD-A 65
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWAS--EVFDTREMEAIQ 119
+F+++G IT +TLVG V + + +++ + +DDGTG + KRW + D Q
Sbjct: 66 DFLLDGRAITQITLVGQVRSINPQPTNITYRIDDGTGTIDVKRWIDPEKAEDADAASQHQ 125
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
YVR+ G LK+F ++ + A VRPV +F+EV H +E Y HL + G +
Sbjct: 126 PDSYVRVWGKLKAFNNRRHVGALFVRPVEDFNEVNYHMLEVAYVHLDAVRQSSGGGGGAG 185
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
D+ S G G + N S+ Q + ++LQ +SS G+
Sbjct: 186 GGGDDNMFVDSYGGGGGGGGSKAANCSTNA---------QRLFNHLQ--NSSAGNEGLEA 234
Query: 240 NELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
N ++ + + + + + L + GLIY T+D+
Sbjct: 235 NIIARGINMSVRDVEAAADELLSAGLIYPTVDD 267
>UNIPROTKB|P15927 [details] [associations]
symbol:RPA2 "Replication protein A 32 kDa subunit"
species:9606 "Homo sapiens" [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019903 "protein phosphatase
binding" evidence=IPI] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006261 "DNA-dependent DNA replication" evidence=TAS]
[GO:0005662 "DNA replication factor A complex" evidence=IPI]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000216 "M/G1
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0000718 "nucleotide-excision
repair, DNA damage removal" evidence=TAS] [GO:0000722 "telomere
maintenance via recombination" evidence=TAS] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=TAS] [GO:0000730 "DNA
recombinase assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006260 "DNA replication" evidence=TAS]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=TAS]
[GO:0006302 "double-strand break repair" evidence=TAS] [GO:0032201
"telomere maintenance via semi-conservative replication"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_216 InterPro:IPR004365
Pfam:PF01336 Reactome:REACT_115566 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000082 GO:GO:0016605 Gene3D:1.10.10.10
InterPro:IPR011991 Reactome:REACT_111183 GO:GO:0003697
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000216
GO:GO:0000084 GO:GO:0000075 GO:GO:0000722 Reactome:REACT_383
GO:GO:0000718 GO:GO:0006283 GO:GO:0006271 GO:GO:0010569
GO:GO:0032201 GO:GO:0006297 GO:GO:0005662 PDB:1Z1D PDBsum:1Z1D
EMBL:AL109927 GO:GO:0000730 PDB:1L1O PDBsum:1L1O eggNOG:COG5235
KO:K10739 OMA:GGNSFMP InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 EMBL:J05249 EMBL:CR450348
EMBL:DQ001128 EMBL:BC001630 EMBL:BC012157 EMBL:BC021257
IPI:IPI00013939 IPI:IPI00646500 IPI:IPI00647667 PIR:A43711
RefSeq:NP_002937.1 UniGene:Hs.79411 PDB:1DPU PDB:1QUQ PDB:2PI2
PDB:2PQA PDB:2Z6K PDB:3KDF PDBsum:1DPU PDBsum:1QUQ PDBsum:2PI2
PDBsum:2PQA PDBsum:2Z6K PDBsum:3KDF ProteinModelPortal:P15927
SMR:P15927 DIP:DIP-24187N IntAct:P15927 MINT:MINT-5002459
STRING:P15927 PhosphoSite:P15927 DMDM:132474 PaxDb:P15927
PRIDE:P15927 DNASU:6118 Ensembl:ENST00000313433
Ensembl:ENST00000373909 Ensembl:ENST00000373912 GeneID:6118
KEGG:hsa:6118 UCSC:uc001bpe.1 CTD:6118 GeneCards:GC01M028218
HGNC:HGNC:10290 HPA:CAB016538 HPA:HPA026306 HPA:HPA026309
MIM:179836 neXtProt:NX_P15927 PharmGKB:PA34652 HOGENOM:HOG000216562
HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T PhylomeDB:P15927 ChiTaRS:RPA2
EvolutionaryTrace:P15927 GenomeRNAi:6118 NextBio:23759
ArrayExpress:P15927 Bgee:P15927 CleanEx:HS_RPA2
Genevestigator:P15927 GermOnline:ENSG00000117748 Uniprot:P15927
Length = 270
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 82/279 (29%), Positives = 140/279 (50%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+ SS + + + S GGF S P A+ S R+R +Q +VP T+ + A+ D+
Sbjct: 9 YGSSSYGGAGGYTQSPGGF-GSPAPSQAEKKS---RAR-AQHIVPCTISQLLSATLV-DE 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 V--FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E I H+ SK+ Q PS+
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQ--PSA 178
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+ S+ S G P N GL +L+ ++ + R G++
Sbjct: 179 GRAPI-SNPGMSEAGNFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QLK + I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFK 265
>UNIPROTKB|Q2KI86 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019903 "protein phosphatase binding" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0010569 eggNOG:COG5235
KO:K10739 OMA:GGNSFMP InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 CTD:6118 HOGENOM:HOG000216562
HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T GeneTree:ENSGT00390000010045
EMBL:DAAA02006344 EMBL:DAAA02006342 EMBL:DAAA02006343 EMBL:BC112729
IPI:IPI00701334 RefSeq:NP_001039449.1 UniGene:Bt.17362 SMR:Q2KI86
STRING:Q2KI86 Ensembl:ENSBTAT00000008174 GeneID:507912
KEGG:bta:507912 InParanoid:Q2KI86 NextBio:20868270 Uniprot:Q2KI86
Length = 270
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 81/279 (29%), Positives = 138/279 (49%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+S+S F + + S GGF P S S AR+ Q +VP T+ + A+ D+
Sbjct: 9 YSTSSFGGAGGYTQSPGGF--GSPTASQAEKKSRARA---QHIVPCTISQLLSATLV-DE 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ N E+ A+++ + +DD T + ++W + E +
Sbjct: 63 V--FRIGNVEISQVTIVGIIRNAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASSENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS Q
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAGR 180
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
P + + + + G G P N GL +L+ ++ + R G++
Sbjct: 181 AP-ISNPGMGEAGNFG--GNNFIPAN--------GLTVAQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFK 265
>POMBASE|SPCC1753.01c [details] [associations]
symbol:ssb2 "single-stranded DNA binding protein Ssb2"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005662 "DNA replication factor A complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006269 "DNA
replication, synthesis of RNA primer" evidence=ISO] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006310 "DNA recombination"
evidence=ISO] [GO:0065007 "biological regulation" evidence=NAS]
[GO:0003697 "single-stranded DNA binding" evidence=IDA]
InterPro:IPR004365 Pfam:PF01336 PomBase:SPCC1753.01c GO:GO:0005829
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0065007
GO:GO:0006269 GO:GO:0005662 eggNOG:COG5235 KO:K10739 OMA:GGNSFMP
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 HOGENOM:HOG000216562 EMBL:U59386 PIR:T41124
RefSeq:NP_588227.2 ProteinModelPortal:Q92373 DIP:DIP-29238N
STRING:Q92373 EnsemblFungi:SPCC1753.01c.1 GeneID:2538781
KEGG:spo:SPCC1753.01c OrthoDB:EOG4F21C7 NextBio:20799963
Uniprot:Q92373
Length = 279
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 82/274 (29%), Positives = 135/274 (49%)
Query: 8 DASNAFS---GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
D ++AFS GGG ++ QS+ PS + L PVT+K I AS D + F
Sbjct: 14 DFNSAFSPGMGGGAGFNEYDQSSQ-PSVDRQQGAGNKLRPVTIKQILNASQVHAD-AEFK 71
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYV 124
I+G+E+ VT VG++ N + ++ + ++DGTG + + W E D + + YV
Sbjct: 72 IDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEVRHW--EHIDA--LSELATDTYV 127
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK--SQVQGFPSSQPQM 182
R+ GN+K F GK I + +R + + +EV H++E I HL ++ + V G ++ P
Sbjct: 128 RVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIAVHLHFTQKANAVNG--ANAPGY 185
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
S N +S A +L + L ++ + S+ E GVHV +L
Sbjct: 186 GTS--NALGYNNISS-NGAANSLEQKLAEYSLTPAQMTVMQAIH--SAPETNEGVHVRQL 240
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++ + P + L+ EG+IY+TIDE H+K
Sbjct: 241 AQSVG-PGIDLTAVTDFLQQEGIIYTTIDENHFK 273
>UNIPROTKB|Q5RC43 [details] [associations]
symbol:RPA2 "Replication protein A 32 kDa subunit"
species:9601 "Pongo abelii" [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISS] InterPro:IPR004365 Pfam:PF01336 GO:GO:0016605
GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0006310 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0010569 KO:K10739 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949 CTD:6118
HOVERGEN:HBG000086 EMBL:CR858438 RefSeq:NP_001125362.2
UniGene:Pab.14522 ProteinModelPortal:Q5RC43 SMR:Q5RC43
GeneID:100172265 KEGG:pon:100172265 InParanoid:Q5RC43
Uniprot:Q5RC43
Length = 270
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 81/279 (29%), Positives = 140/279 (50%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+ SS + + + S GGF S P A+ S R+R +Q +VP T+ + A+ D+
Sbjct: 9 YGSSSYGGAGGYTQSPGGF-GSPAPSQAEKKS---RAR-AQHIVPCTISQLLSATLV-DE 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 V--FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E I H+ SK+ Q PS+
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQ--PSA 178
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+ S+ S G P N GL +L+ ++ + R G++
Sbjct: 179 GRAPI-SNPGMSEAGNFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QLK + + ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLKNQLKHMSVSSVKQAMDFLSNEGHIYSTVDDDHFK 265
>UNIPROTKB|F1STM9 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019903 "protein phosphatase binding" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0010569 KO:K10739
OMA:GGNSFMP InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 CTD:6118 GeneTree:ENSGT00390000010045
EMBL:CU928393 RefSeq:NP_001231871.1 UniGene:Ssc.6559
Ensembl:ENSSSCT00000003978 GeneID:100514295 KEGG:ssc:100514295
Uniprot:F1STM9
Length = 270
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 81/279 (29%), Positives = 140/279 (50%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+SSS F + + S GGF S P A+ S R+R +Q +VP T+ + A+ D+
Sbjct: 9 YSSSSFGGAGGYTQSPGGF-GSPTPSQAEKKS---RAR-AQHIVPCTISQLLSATLV-DE 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ A+++ + +DD T + ++W + E +
Sbjct: 63 V--FKIGNVEISQVTIVGIIRHAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASGENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ +KS Q
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMLLNKSNSQLLAGR 180
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
P + + + G G P N GL +L+ ++ + R G++
Sbjct: 181 VP-VSNPGMGEVGSFG--GNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLKNQLQHMSVASIKQAVDFLSNEGHIYSTVDDDHFK 265
>ASPGD|ASPL0000062650 [details] [associations]
symbol:AN0582 species:162425 "Emericella nidulans"
[GO:0045184 "establishment of protein localization" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0030491 "heteroduplex
formation" evidence=IEA] [GO:0007004 "telomere maintenance via
telomerase" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] EMBL:BN001308 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AACD01000007 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 eggNOG:COG5235 KO:K10739 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949
HOGENOM:HOG000216562 OrthoDB:EOG4F21C7 RefSeq:XP_658186.1
ProteinModelPortal:Q5BFU8 STRING:Q5BFU8
EnsemblFungi:CADANIAT00002095 GeneID:2876360 KEGG:ani:AN0582.2
OMA:RMENRIT Uniprot:Q5BFU8
Length = 278
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 75/270 (27%), Positives = 139/270 (51%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGGFMP + PS + ++ L PVT+K I +A+ + +NF I+G +++++
Sbjct: 16 GGGFMPGETTS----PSGGRQEWNNTTLRPVTIKQILDATQPYPE-ANFTIDGQDVSSIV 70
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWA--SEVFDTRE--------MEAIQDGMYV 124
+G V N +A++V + LDDGTG V K+W SE DT E + ++ Y
Sbjct: 71 FIGQVRNISTQATNVTYKLDDGTGEVEAKQWINPSEAMDTTEDFGKEGKDLNGVEINGYA 130
Query: 125 RLIGNLKSFQGKKQIV-AFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
++ G LKS G +++V VRP+T+ +E+ H++E HL +++ G + +
Sbjct: 131 KVFGKLKSLFGDRKVVNTHCVRPLTDINELHVHFLEAAAVHLFHTRG-APGPAAGATGKI 189
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNEL 242
D +A GL G A F + + + + + L+ +P ++E G+H +
Sbjct: 190 DGG--DAAMGGLDG---AGVGGGGGFPAN-MSATARRVYNLLRTEPQNNE---GLHAQFI 240
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ +L +P + ++ + L N G+++ST+D+
Sbjct: 241 AAKLGLPPQDVVRAGDELINAGMVFSTVDD 270
>MGI|MGI:1339939 [details] [associations]
symbol:Rpa2 "replication protein A2" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005662 "DNA replication factor A complex" evidence=ISO]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISO] [GO:0019903 "protein
phosphatase binding" evidence=ISO] [GO:0047485 "protein N-terminus
binding" evidence=ISO] MGI:MGI:1339939 GO:GO:0005654 GO:GO:0003677
GO:GO:0016605 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
InterPro:IPR011991 Reactome:REACT_120463 GO:GO:0006310
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Reactome:REACT_27235 GO:GO:0010569 eggNOG:COG5235
InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 HOGENOM:HOG000216562 HOVERGEN:HBG000086
OrthoDB:EOG4WQ13T ChiTaRS:RPA2 EMBL:D00812 IPI:IPI00311131
PIR:S28682 UniGene:Mm.2870 ProteinModelPortal:Q62193 SMR:Q62193
DIP:DIP-48715N STRING:Q62193 PhosphoSite:Q62193 PaxDb:Q62193
PRIDE:Q62193 InParanoid:Q62193 CleanEx:MM_RPA2
Genevestigator:Q62193 GermOnline:ENSMUSG00000028884 Uniprot:Q62193
Length = 270
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 81/279 (29%), Positives = 141/279 (50%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
F+SS + + S GGF S P A+ S R R +Q +VP T+ + A+ + D+
Sbjct: 9 FTSSTYGGRGGYTQSPGGF-GSPTPSQAEKKS---RVR-AQHIVPCTISQLLSATLT-DE 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 V--FRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SK Q +
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHMMLSKPNSQA-SAG 179
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+P M + ++ S SG P N L +L+ ++ + R G++
Sbjct: 180 RPSMSNPGMSESFN--FSGNNFMPANR--------LTVVQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDHFK 265
>ZFIN|ZDB-GENE-010131-3 [details] [associations]
symbol:rpa2 "replication protein A2" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 ZFIN:ZDB-GENE-010131-3
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HSSP:P15927
KO:K10739 InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 CTD:6118 HOGENOM:HOG000216562 HOVERGEN:HBG000086
EMBL:AY007304 IPI:IPI00498507 RefSeq:NP_571786.1 UniGene:Dr.33922
ProteinModelPortal:Q9DDG4 SMR:Q9DDG4 STRING:Q9DDG4 PRIDE:Q9DDG4
GeneID:65226 KEGG:dre:65226 InParanoid:Q9DDG4 NextBio:20902023
ArrayExpress:Q9DDG4 Bgee:Q9DDG4 Uniprot:Q9DDG4
Length = 272
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 81/260 (31%), Positives = 129/260 (49%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF Q D R+R +Q +VP TV + A + D F + +EI V
Sbjct: 18 SPGGFGSPAASQGGD---KKGRTR-AQQIVPCTVSQLLSAVQAEDV---FKVGEVEIAQV 70
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREM----EAIQDGMYVRLIG 128
T+VG++ + ++ ++ + +DD T + K+W DT +M I G YV++ G
Sbjct: 71 TIVGVIRSTDKSTINIQYKVDDMTAAPMDVKQW----IDTEDMGVDNSVIPPGSYVKVSG 126
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLN 188
NL+SFQ + +VAFSVR + + +EVT H +E + HLQ SK Q G + +S+N
Sbjct: 127 NLRSFQNNRSLVAFSVRVLEDMNEVTSHMLEVVNAHLQQSKPQNMGGDERMMPVSHNSMN 186
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
+ TG GY A L V+GL +L ++ S + +G+ ++EL ++L
Sbjct: 187 SMGTTG--GYSGANMML-----VNGLSATQNQVLSLIK---SCQELQGISMHELKQKLNS 236
Query: 248 IPQKKIMDSIASLENEGLIY 267
+ I ++ L NEG Y
Sbjct: 237 MSANVIRQTVDFLSNEGHQY 256
>UNIPROTKB|Q5ZLH1 [details] [associations]
symbol:RPA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004365
Pfam:PF01336 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:COG5235 KO:K10739 OMA:GGNSFMP InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949 CTD:6118
HOGENOM:HOG000216562 HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T
GeneTree:ENSGT00390000010045 EMBL:AADN02051310 EMBL:AJ719763
IPI:IPI00589874 RefSeq:NP_001026063.1 UniGene:Gga.1820 SMR:Q5ZLH1
STRING:Q5ZLH1 Ensembl:ENSGALT00000001050 GeneID:419566
KEGG:gga:419566 InParanoid:Q5ZLH1 NextBio:20822599 Uniprot:Q5ZLH1
Length = 267
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 82/265 (30%), Positives = 131/265 (49%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P A RSR SQ +VP TV + A D++ F I+ +EI+ V
Sbjct: 21 SPGGF---SSPTGAQ-AEKKQRSR-SQSIVPCTVSQLLAAEQV--DEA-FRIHDVEISQV 72
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG+V + E+ +++ + +DD T + ++W E + G YV++ G+L+S
Sbjct: 73 TVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGSENIVVPPGTYVKVAGHLRS 132
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + P+ N +E T H +E + H+ K+ S PQ S ++
Sbjct: 133 FQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLT--LASRAPQ----SFTSAGM 186
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQK 251
+ + GY V+GL +L+ ++ S E G+ + EL QL +
Sbjct: 187 SDVGGYG------GGSLPVNGLTAHQSQVLNLIKNCHSPE---GMSLQELKLQLHNVSIP 237
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
I ++ L +EG IYST+D+ HYK
Sbjct: 238 TIKQAVEFLSSEGHIYSTVDDDHYK 262
>CGD|CAL0006323 [details] [associations]
symbol:RFA2 species:5476 "Candida albicans" [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA;IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA;IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0030491 "heteroduplex formation" evidence=IEA]
[GO:0007004 "telomere maintenance via telomerase" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IEA] [GO:0045184 "establishment of protein
localization" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR004365 Pfam:PF01336 CGD:CAL0006323
EMBL:AACQ01000095 EMBL:AACQ01000096 GO:GO:0003676
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 HOGENOM:HOG000248662
RefSeq:XP_714795.1 RefSeq:XP_714857.1 STRING:Q59Z33 GeneID:3643506
GeneID:3643586 KEGG:cal:CaO19.2267 KEGG:cal:CaO19.9807
Uniprot:Q59Z33
Length = 272
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 74/282 (26%), Positives = 140/282 (49%)
Query: 3 SSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQ---GLVPVTVKMISEASHSGDD 59
S ++D +N + G SQ + ++ S+ R +Q L PVT+K I++A+ D
Sbjct: 2 SDFEYDNNNTGAFGNI--SQGGFNTEHAGSSQRQTTTQVRQSLTPVTIKQINDATQPVPD 59
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTRE--MEA 117
F +N +E+ ++ VG+V N E + + T++DGTG + ++W E + E E
Sbjct: 60 -GEFKVNNVELNMISFVGVVRNVENTNASIAVTIEDGTGSIDVRKWVDETISSAEEDFEK 118
Query: 118 IQD--GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGF 175
+ G YV + G+LK F +K + S+ +T+ +++ H++ I HL+ QG
Sbjct: 119 YNEMKGKYVYVGGSLKQFNNRKTVQNASISLITDSNQIVYHHLSAIEHHLK-----AQGI 173
Query: 176 PSSQPQMVDS--SLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSER 233
++ + + N++A G + PT+LS G L D ++ L++ S +
Sbjct: 174 TAADAASAGAGQATNSTASAGSGLFMDNPTSLSKDTG--SLTD---QVIAVLKEASRTMP 228
Query: 234 ERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ GV V+ ++E+L I +++ + L +EG Y+ D+ Y
Sbjct: 229 D-GVPVDYVAEKLSITKEESQFQLLKLNDEGKAYAGYDDNSY 269
>UNIPROTKB|Q59Z33 [details] [associations]
symbol:RFA2 "Putative uncharacterized protein RFA2"
species:237561 "Candida albicans SC5314" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] InterPro:IPR004365
Pfam:PF01336 CGD:CAL0006323 EMBL:AACQ01000095 EMBL:AACQ01000096
GO:GO:0003676 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 HOGENOM:HOG000248662
RefSeq:XP_714795.1 RefSeq:XP_714857.1 STRING:Q59Z33 GeneID:3643506
GeneID:3643586 KEGG:cal:CaO19.2267 KEGG:cal:CaO19.9807
Uniprot:Q59Z33
Length = 272
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 74/282 (26%), Positives = 140/282 (49%)
Query: 3 SSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQ---GLVPVTVKMISEASHSGDD 59
S ++D +N + G SQ + ++ S+ R +Q L PVT+K I++A+ D
Sbjct: 2 SDFEYDNNNTGAFGNI--SQGGFNTEHAGSSQRQTTTQVRQSLTPVTIKQINDATQPVPD 59
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTRE--MEA 117
F +N +E+ ++ VG+V N E + + T++DGTG + ++W E + E E
Sbjct: 60 -GEFKVNNVELNMISFVGVVRNVENTNASIAVTIEDGTGSIDVRKWVDETISSAEEDFEK 118
Query: 118 IQD--GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGF 175
+ G YV + G+LK F +K + S+ +T+ +++ H++ I HL+ QG
Sbjct: 119 YNEMKGKYVYVGGSLKQFNNRKTVQNASISLITDSNQIVYHHLSAIEHHLK-----AQGI 173
Query: 176 PSSQPQMVDS--SLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSER 233
++ + + N++A G + PT+LS G L D ++ L++ S +
Sbjct: 174 TAADAASAGAGQATNSTASAGSGLFMDNPTSLSKDTG--SLTD---QVIAVLKEASRTMP 228
Query: 234 ERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ GV V+ ++E+L I +++ + L +EG Y+ D+ Y
Sbjct: 229 D-GVPVDYVAEKLSITKEESQFQLLKLNDEGKAYAGYDDNSY 269
>UNIPROTKB|Q5TEJ7 [details] [associations]
symbol:RPA2 "Replication protein A 32 kDa subunit"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR004365 Pfam:PF01336
GO:GO:0005634 GO:GO:0003676 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AL109927 UniGene:Hs.79411 HGNC:HGNC:10290
HOGENOM:HOG000216562 HOVERGEN:HBG000086 ChiTaRS:RPA2
IPI:IPI00646957 SMR:Q5TEJ7 MINT:MINT-1373080 STRING:Q5TEJ7
Ensembl:ENST00000444045 Uniprot:Q5TEJ7
Length = 179
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 54/175 (30%), Positives = 95/175 (54%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+ SS + + + S GGF S P A+ S R+R +Q +VP T+ + A+ D+
Sbjct: 13 YGSSSYGGAGGYTQSPGGF-GSPAPSQAEKKS---RAR-AQHIVPCTISQLLSATLV-DE 66
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 67 V--FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVV 124
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E I H+ SK+ Q
Sbjct: 125 PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQ 179
>SGD|S000005256 [details] [associations]
symbol:RFA2 "Subunit of heterotrimeric Replication Protein A
(RPA)" species:4932 "Saccharomyces cerevisiae" [GO:0000781
"chromosome, telomeric region" evidence=IMP] [GO:0005662 "DNA
replication factor A complex" evidence=IDA] [GO:0000722 "telomere
maintenance via recombination" evidence=IPI] [GO:0007004 "telomere
maintenance via telomerase" evidence=IMP] [GO:0045184
"establishment of protein localization" evidence=IMP] [GO:0006260
"DNA replication" evidence=IEA;IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0006289 "nucleotide-excision repair"
evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IGI] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006268
"DNA unwinding involved in replication" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IPI] [GO:0006312 "mitotic recombination" evidence=IPI]
InterPro:IPR004365 Pfam:PF01336 SGD:S000005256 GO:GO:0043565
EMBL:BK006947 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0045184 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0000781 GO:GO:0007131 EMBL:Z46259 GO:GO:0007004 GO:GO:0000722
GO:GO:0006289 GO:GO:0006268 GO:GO:0005662 EMBL:Z71588 GO:GO:0030491
eggNOG:COG5235 KO:K10739 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 GeneTree:ENSGT00390000010045
OrthoDB:EOG4F21C7 EMBL:X59749 EMBL:S64861 PIR:B37281
RefSeq:NP_014087.1 ProteinModelPortal:P26754 SMR:P26754
DIP:DIP-2518N IntAct:P26754 MINT:MINT-643412 STRING:P26754
PaxDb:P26754 PeptideAtlas:P26754 EnsemblFungi:YNL312W GeneID:855404
KEGG:sce:YNL312W CYGD:YNL312w HOGENOM:HOG000248662 OMA:QGFIYPT
NextBio:979235 Genevestigator:P26754 GermOnline:YNL312W
Uniprot:P26754
Length = 273
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 73/294 (24%), Positives = 140/294 (47%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQP-PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
M + ++ ++ +GGGF S+ P S + ++T + L PVT+K I E+ D
Sbjct: 1 MATYQPYNEYSSVTGGGFENSESRPGSGESETNTRVNT----LTPVTIKQILESKQDIQD 56
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD-------- 111
F+ + E+ +V VG+V N + +++ T++DGTG++ ++W+ + D
Sbjct: 57 -GPFVSHNQELHHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDS 115
Query: 112 ------TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL 165
++ + + G YV++ G LK F GKK I ++P+ +F+EV H++E I H
Sbjct: 116 SGKGYGSQVAQQFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDSFNEVLTHHLEVIKCH- 174
Query: 166 QNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYL 225
S G QP ++S+ N + G S + + SS G +++
Sbjct: 175 ----SIASGM-MKQP--LESASNNN---GQSLFVKDDNDTSS-----GSSPLQRILEFCK 219
Query: 226 QQPSSSERER-GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+Q + V + +S+ L + + + + +L ++G IY T D+ ++ FA
Sbjct: 220 KQCEGKDANSFAVPIPLISQSLNLDETTVRNCCTTLTDQGFIYPTFDDNNF-FA 272
>FB|FBgn0032906 [details] [associations]
symbol:RPA2 "Replication protein A2" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005662
"DNA replication factor A complex" evidence=ISS] [GO:0006261
"DNA-dependent DNA replication" evidence=ISS] [GO:0022008
"neurogenesis" evidence=IMP] GO:GO:0022008 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 HSSP:P15927 InterPro:IPR014646 InterPro:IPR014892
Pfam:PF08784 PIRSF:PIRSF036949 EMBL:AY089651
ProteinModelPortal:Q8SXG3 SMR:Q8SXG3 STRING:Q8SXG3 PRIDE:Q8SXG3
FlyBase:FBgn0032906 InParanoid:Q8SXG3 OrthoDB:EOG476HG5
ArrayExpress:Q8SXG3 Bgee:Q8SXG3 Uniprot:Q8SXG3
Length = 246
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 59/247 (23%), Positives = 112/247 (45%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PTGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + P+ +
Sbjct: 70 TYTLEDHSGRIDAHYWLEEG-DALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPILD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + + Q +G + A +G + SS
Sbjct: 129 PNEVCTHLLEVLNARYRAEDCQSKG---------GAGAGAGASSGSGSIADFTASQSSAI 179
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYS 268
V GL+ Q + ++ S+ E G+ EL + I ++ + + + +EG IYS
Sbjct: 180 -VSGLEPKQQAVFQAIK---SNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>UNIPROTKB|Q13156 [details] [associations]
symbol:RPA4 "Replication protein A 30 kDa subunit"
species:9606 "Homo sapiens" [GO:0006289 "nucleotide-excision
repair" evidence=IDA] [GO:0033260 "DNA replication involved in S
phase" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0000077 "DNA damage checkpoint" evidence=IDA] [GO:0005662 "DNA
replication factor A complex" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006270 "DNA
replication initiation" evidence=TAS] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=TAS] [GO:0000216 "M/G1 transition
of mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell
cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0000077 Reactome:REACT_115566
GO:GO:0005654 Reactome:REACT_21300 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006270 GO:GO:0003697 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000216 GO:GO:0006289
Reactome:REACT_383 EMBL:Z86061 GO:GO:0005662 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949
HOGENOM:HOG000216562 HOVERGEN:HBG000086 OrthoDB:EOG4WQ13T
EMBL:U24186 EMBL:AF494047 EMBL:BC069791 EMBL:BC069808 EMBL:BC069824
EMBL:BC104013 EMBL:BC104014 IPI:IPI00011917 RefSeq:NP_037479.1
UniGene:Hs.659349 ProteinModelPortal:Q13156 SMR:Q13156
DIP:DIP-24241N IntAct:Q13156 STRING:Q13156 PhosphoSite:Q13156
DMDM:14917036 PRIDE:Q13156 DNASU:29935 Ensembl:ENST00000373040
GeneID:29935 KEGG:hsa:29935 UCSC:uc004efv.4 CTD:29935
GeneCards:GC0XP096139 HGNC:HGNC:30305 MIM:300767 neXtProt:NX_Q13156
PharmGKB:PA134988548 eggNOG:NOG325006 InParanoid:Q13156 KO:K10741
OMA:VGVYAKV GenomeRNAi:29935 NextBio:52579 Bgee:Q13156
CleanEx:HS_RPA4 Genevestigator:Q13156 GermOnline:ENSG00000204086
Uniprot:Q13156
Length = 261
Score = 138 (53.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 41/191 (21%), Positives = 89/191 (46%)
Query: 3 SSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSN 62
S A++ SGG + + + + R Q +VP V + S + D
Sbjct: 8 SYGSISAADGASGGSDQLCERDATPAIKTQRPKVR-IQDVVPCNVNQL--LSSTVFDPV- 63
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDG 121
F + G+ ++ V++VG++ E+ ++ + + +DD T + + ++W +++ + G
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGRE-KVKQVTPLSVG 122
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPS 177
+YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P
Sbjct: 123 VYVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPV 182
Query: 178 SQPQMVDSSLN 188
S ++ D+ N
Sbjct: 183 SPSEVNDAGDN 193
Score = 71 (30.1 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 234 ERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+ G ++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 215 QEGKSIHELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>WB|WBGene00019767 [details] [associations]
symbol:rpa-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0007126 "meiosis" evidence=IMP] [GO:0045132 "meiotic chromosome
segregation" evidence=IMP] [GO:0051096 "positive regulation of
helicase activity" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0005662 "DNA replication factor A complex"
evidence=ISS] GO:GO:0009792 GO:GO:0002009 GO:GO:0018991
GO:GO:0040010 GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006974 GO:GO:0040035 GO:GO:0045132 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005662 GO:GO:0051096
KO:K10739 InterPro:IPR014646 InterPro:IPR014892 Pfam:PF08784
PIRSF:PIRSF036949 UCSC:M04F3.1.1 EMBL:FO080503 RefSeq:NP_491446.1
ProteinModelPortal:Q95Y97 SMR:Q95Y97 DIP:DIP-26984N IntAct:Q95Y97
MINT:MINT-1057929 STRING:Q95Y97 World-2DPAGE:0011:Q95Y97
PaxDb:Q95Y97 EnsemblMetazoa:M04F3.1.1 EnsemblMetazoa:M04F3.1.2
EnsemblMetazoa:M04F3.1.3 GeneID:172092 KEGG:cel:CELE_M04F3.1
CTD:172092 WormBase:M04F3.1 eggNOG:NOG321490
GeneTree:ENSGT00390000013061 HOGENOM:HOG000017257 InParanoid:Q95Y97
OMA:SSFMTDR NextBio:873977 Uniprot:Q95Y97
Length = 288
Score = 154 (59.3 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 64/275 (23%), Positives = 115/275 (41%)
Query: 14 SGGGFMPSQPPQSADY-PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
+G G+ + D P S A + + VPVT+ + E + DDK +++
Sbjct: 11 AGNGWAAGESSFMTDRKPDSKATTLGERLPVPVTISNLIEHFSAQDDK--YVVGTFRFAT 68
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWAS--EVFDTREMEAIQDGMYVRLIGNL 130
V VG+V + + + + L D + R T + +I +G VR IG L
Sbjct: 69 VLTVGIVKDISQDGTTYTYDLCDPNNTEMEYRTLKYDNEGSTFDHSSIVEGTRVRAIGKL 128
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIEC----IYFHLQNSKSQVQGFPSSQPQ-MVDS 185
K F G I+ F++ PV + + T +E ++F +N +++ S Q M+
Sbjct: 129 KGFDGNNTIMLFNITPVEDDKDFTIFELEAEAARLFFQ-KNVSEKLKSVDSDGFQGMLAP 187
Query: 186 SLNTSARTGLSGYQTAPTN----LSSQFGVDGLKDCD---QMILDYLQQPSSSERERGVH 238
+ ++T Q + T Q + G D + I L R+ G H
Sbjct: 188 PKSRMSQTSHQSSQGSDTKERLYAQPQKVMTGANQGDVLRERITAVLMAVPEGSRDEGRH 247
Query: 239 VNELSEQLKIPQKKIMDS-IASLENEGLIYSTIDE 272
V+ ++EQ++ I+ + + GL+Y+T+DE
Sbjct: 248 VSWIAEQIQETNISIVRKCVGEMVENGLVYTTVDE 282
>UNIPROTKB|Q95Y97 [details] [associations]
symbol:rpa-2 "Protein RPA-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] GO:GO:0009792
GO:GO:0002009 GO:GO:0018991 GO:GO:0040010 GO:GO:0040011
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974 GO:GO:0040035
GO:GO:0045132 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0005662 GO:GO:0051096 KO:K10739 InterPro:IPR014646
InterPro:IPR014892 Pfam:PF08784 PIRSF:PIRSF036949 UCSC:M04F3.1.1
EMBL:FO080503 RefSeq:NP_491446.1 ProteinModelPortal:Q95Y97
SMR:Q95Y97 DIP:DIP-26984N IntAct:Q95Y97 MINT:MINT-1057929
STRING:Q95Y97 World-2DPAGE:0011:Q95Y97 PaxDb:Q95Y97
EnsemblMetazoa:M04F3.1.1 EnsemblMetazoa:M04F3.1.2
EnsemblMetazoa:M04F3.1.3 GeneID:172092 KEGG:cel:CELE_M04F3.1
CTD:172092 WormBase:M04F3.1 eggNOG:NOG321490
GeneTree:ENSGT00390000013061 HOGENOM:HOG000017257 InParanoid:Q95Y97
OMA:SSFMTDR NextBio:873977 Uniprot:Q95Y97
Length = 288
Score = 154 (59.3 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 64/275 (23%), Positives = 115/275 (41%)
Query: 14 SGGGFMPSQPPQSADY-PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
+G G+ + D P S A + + VPVT+ + E + DDK +++
Sbjct: 11 AGNGWAAGESSFMTDRKPDSKATTLGERLPVPVTISNLIEHFSAQDDK--YVVGTFRFAT 68
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWAS--EVFDTREMEAIQDGMYVRLIGNL 130
V VG+V + + + + L D + R T + +I +G VR IG L
Sbjct: 69 VLTVGIVKDISQDGTTYTYDLCDPNNTEMEYRTLKYDNEGSTFDHSSIVEGTRVRAIGKL 128
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIEC----IYFHLQNSKSQVQGFPSSQPQ-MVDS 185
K F G I+ F++ PV + + T +E ++F +N +++ S Q M+
Sbjct: 129 KGFDGNNTIMLFNITPVEDDKDFTIFELEAEAARLFFQ-KNVSEKLKSVDSDGFQGMLAP 187
Query: 186 SLNTSARTGLSGYQTAPTN----LSSQFGVDGLKDCD---QMILDYLQQPSSSERERGVH 238
+ ++T Q + T Q + G D + I L R+ G H
Sbjct: 188 PKSRMSQTSHQSSQGSDTKERLYAQPQKVMTGANQGDVLRERITAVLMAVPEGSRDEGRH 247
Query: 239 VNELSEQLKIPQKKIMDS-IASLENEGLIYSTIDE 272
V+ ++EQ++ I+ + + GL+Y+T+DE
Sbjct: 248 VSWIAEQIQETNISIVRKCVGEMVENGLVYTTVDE 282
>UNIPROTKB|Q5TEJ0 [details] [associations]
symbol:RPA2 "Replication protein A 32 kDa subunit"
species:9606 "Homo sapiens" [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005662 "DNA replication factor A
complex" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003697 GO:GO:0005662 EMBL:AL109927
InterPro:IPR014892 Pfam:PF08784 UniGene:Hs.79411 HGNC:HGNC:10290
HOVERGEN:HBG000086 ChiTaRS:RPA2 IPI:IPI00642145 SMR:Q5TEJ0
STRING:Q5TEJ0 Ensembl:ENST00000419958 Uniprot:Q5TEJ0
Length = 122
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/129 (28%), Positives = 59/129 (45%)
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
+ +E T H +E I H+ SK+ Q PS+ + S+ S G P N
Sbjct: 3 DMNEFTTHILEVINAHMVLSKANSQ--PSAGRAPI-SNPGMSEAGNFGGNSFMPAN---- 55
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIY 267
GL +L+ ++ + R G++ +L QLK + I ++ L NEG IY
Sbjct: 56 ----GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIY 108
Query: 268 STIDEFHYK 276
ST+D+ H+K
Sbjct: 109 STVDDDHFK 117
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 280 280 0.00082 115 3 11 23 0.40 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 597 (63 KB)
Total size of DFA: 190 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.56u 0.11s 24.67t Elapsed: 00:00:01
Total cpu time: 24.57u 0.11s 24.68t Elapsed: 00:00:01
Start: Fri May 10 09:27:50 2013 End: Fri May 10 09:27:51 2013